Query 031213
Match_columns 164
No_of_seqs 129 out of 1070
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 17:18:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydh_A AT5G11950; structural g 100.0 5.7E-46 2E-50 300.3 12.6 154 1-154 54-207 (216)
2 2a33_A Hypothetical protein; s 100.0 4E-45 1.4E-49 295.1 13.0 156 1-156 58-213 (215)
3 3sbx_A Putative uncharacterize 100.0 2.1E-44 7.1E-49 286.0 12.8 132 1-132 57-188 (189)
4 3qua_A Putative uncharacterize 100.0 7.5E-44 2.6E-48 284.8 11.5 132 1-132 66-197 (199)
5 1t35_A Hypothetical protein YV 100.0 9.8E-44 3.4E-48 282.2 10.5 138 1-138 46-183 (191)
6 1wek_A Hypothetical protein TT 100.0 2.1E-38 7.2E-43 256.1 12.5 135 1-137 81-216 (217)
7 1weh_A Conserved hypothetical 100.0 1.5E-37 5.2E-42 242.7 8.5 124 1-133 45-170 (171)
8 3gh1_A Predicted nucleotide-bi 100.0 7.9E-37 2.7E-41 266.6 11.6 144 1-148 189-351 (462)
9 3bq9_A Predicted rossmann fold 100.0 8E-35 2.7E-39 255.0 12.4 143 1-148 188-349 (460)
10 1rcu_A Conserved hypothetical 100.0 6.6E-33 2.3E-37 220.8 10.0 122 1-136 70-194 (195)
11 2iz6_A Molybdenum cofactor car 100.0 8.8E-30 3E-34 199.8 3.6 115 1-135 58-172 (176)
12 3uqz_A DNA processing protein 96.5 0.015 5.1E-07 48.3 9.4 111 3-131 149-280 (288)
13 3maj_A DNA processing chain A; 96.4 0.012 4.2E-07 50.6 8.3 114 2-133 170-303 (382)
14 2khz_A C-MYC-responsive protei 95.1 0.061 2.1E-06 40.6 6.9 81 42-135 67-149 (165)
15 2f62_A Nucleoside 2-deoxyribos 94.7 0.028 9.7E-07 42.6 4.0 89 40-136 55-159 (161)
16 3imk_A Putative molybdenum car 94.1 0.79 2.7E-05 34.7 10.8 86 3-92 22-110 (158)
17 1f8y_A Nucleoside 2-deoxyribos 93.7 0.069 2.3E-06 40.3 4.3 45 41-91 67-115 (157)
18 3ehd_A Uncharacterized conserv 92.6 0.15 5.3E-06 38.7 4.8 87 41-134 58-160 (162)
19 4fyk_A Deoxyribonucleoside 5'- 91.4 0.22 7.5E-06 37.5 4.4 45 40-90 56-102 (152)
20 2nx2_A Hypothetical protein YP 89.3 1.9 6.6E-05 32.8 8.2 86 3-90 58-169 (181)
21 1s2d_A Purine trans deoxyribos 88.9 0.5 1.7E-05 35.8 4.6 43 41-89 70-116 (167)
22 2o6l_A UDP-glucuronosyltransfe 88.6 1.4 4.9E-05 31.6 6.8 64 51-135 85-152 (170)
23 3ufx_B Succinyl-COA synthetase 84.5 1.9 6.4E-05 36.8 6.2 82 52-152 301-384 (397)
24 3otg_A CALG1; calicheamicin, T 84.1 10 0.00036 30.5 10.5 35 46-90 302-336 (412)
25 2p6p_A Glycosyl transferase; X 81.8 6.2 0.00021 31.8 8.2 67 49-135 276-345 (384)
26 2iya_A OLEI, oleandomycin glyc 80.7 18 0.00063 29.4 10.9 68 48-135 317-387 (424)
27 2yjn_A ERYCIII, glycosyltransf 80.4 4.6 0.00016 33.6 7.1 78 36-135 321-401 (441)
28 1iir_A Glycosyltransferase GTF 78.5 14 0.00047 30.3 9.4 77 36-134 287-366 (415)
29 4fzr_A SSFS6; structural genom 77.7 4.1 0.00014 33.1 5.8 33 47-89 295-327 (398)
30 1v4v_A UDP-N-acetylglucosamine 75.9 5.1 0.00017 32.1 5.9 67 45-136 267-333 (376)
31 3ia7_A CALG4; glycosysltransfe 75.7 15 0.0005 29.4 8.6 69 48-135 293-364 (402)
32 3hbm_A UDP-sugar hydrolase; PS 74.6 1.5 5E-05 35.6 2.3 53 39-109 216-268 (282)
33 2jzc_A UDP-N-acetylglucosamine 74.6 3.4 0.00012 32.5 4.4 55 46-110 125-181 (224)
34 3rsc_A CALG2; TDP, enediyne, s 74.3 16 0.00055 29.5 8.6 69 48-136 309-380 (415)
35 2iyf_A OLED, oleandomycin glyc 73.5 11 0.00037 30.8 7.4 33 48-90 295-327 (430)
36 3beo_A UDP-N-acetylglucosamine 73.2 14 0.00047 29.2 7.8 66 45-135 275-340 (375)
37 2f9f_A First mannosyl transfer 72.3 10 0.00035 27.1 6.3 71 44-136 89-161 (177)
38 1rrv_A Glycosyltransferase GTF 71.9 10 0.00035 31.1 6.9 66 49-134 299-367 (416)
39 3h4t_A Glycosyltransferase GTF 70.9 37 0.0013 27.7 10.2 71 48-135 280-350 (404)
40 3tsa_A SPNG, NDP-rhamnosyltran 70.5 7.6 0.00026 31.2 5.7 68 49-136 283-355 (391)
41 2iw1_A Lipopolysaccharide core 68.6 26 0.00089 27.4 8.4 70 44-135 262-335 (374)
42 3dzc_A UDP-N-acetylglucosamine 67.8 11 0.00036 31.3 6.2 76 35-135 289-365 (396)
43 3oti_A CALG3; calicheamicin, T 67.8 9.9 0.00034 30.8 5.9 32 48-89 295-326 (398)
44 1vgv_A UDP-N-acetylglucosamine 66.4 14 0.00047 29.4 6.4 67 44-135 274-340 (384)
45 1f0k_A MURG, UDP-N-acetylgluco 61.7 15 0.00053 28.9 5.8 74 45-134 247-322 (364)
46 4amg_A Snogd; transferase, pol 61.3 48 0.0016 26.4 8.8 73 3-89 259-331 (400)
47 4hwg_A UDP-N-acetylglucosamine 61.0 45 0.0016 27.6 8.8 77 35-136 264-341 (385)
48 3st8_A Bifunctional protein GL 60.5 8.1 0.00028 33.2 4.1 80 54-156 13-95 (501)
49 1nns_A L-asparaginase II; amid 58.1 23 0.00077 29.3 6.4 44 44-90 71-114 (326)
50 3qhp_A Type 1 capsular polysac 56.9 30 0.001 23.9 6.1 71 43-135 65-138 (166)
51 2bfw_A GLGA glycogen synthase; 55.8 26 0.0009 24.9 5.8 71 44-136 107-179 (200)
52 3okp_A GDP-mannose-dependent a 54.9 32 0.0011 27.0 6.6 71 44-136 264-343 (394)
53 3ico_A 6PGL, 6-phosphogluconol 53.1 64 0.0022 25.6 8.2 43 51-94 53-95 (268)
54 3zqu_A Probable aromatic acid 51.8 4 0.00014 31.9 0.7 79 53-132 95-183 (209)
55 3s2u_A UDP-N-acetylglucosamine 51.8 8.5 0.00029 31.5 2.7 71 48-135 248-322 (365)
56 3ot5_A UDP-N-acetylglucosamine 51.5 30 0.001 28.7 6.1 76 35-135 283-359 (403)
57 3tx2_A Probable 6-phosphogluco 51.4 82 0.0028 24.6 8.4 44 50-94 36-79 (251)
58 3nxk_A Cytoplasmic L-asparagin 49.0 37 0.0013 28.2 6.3 37 51-90 87-123 (334)
59 2xci_A KDO-transferase, 3-deox 47.7 32 0.0011 28.1 5.6 72 44-136 269-345 (374)
60 2jjm_A Glycosyl transferase, g 47.2 63 0.0022 25.6 7.3 71 44-135 276-348 (394)
61 2hy7_A Glucuronosyltransferase 46.4 44 0.0015 27.4 6.3 85 43-148 275-364 (406)
62 2icy_A Probable UTP-glucose-1- 46.4 29 0.00098 30.2 5.4 65 55-134 81-150 (469)
63 3oc6_A 6-phosphogluconolactona 45.0 94 0.0032 24.2 7.8 45 49-94 35-79 (248)
64 1wls_A L-asparaginase; structu 44.7 35 0.0012 28.2 5.4 41 48-90 69-109 (328)
65 2d6f_A Glutamyl-tRNA(Gln) amid 42.8 46 0.0016 28.7 6.0 36 52-90 167-202 (435)
66 3c48_A Predicted glycosyltrans 42.8 69 0.0023 25.7 6.9 71 44-135 317-389 (438)
67 2him_A L-asparaginase 1; hydro 42.2 53 0.0018 27.5 6.2 45 44-90 93-137 (358)
68 1p3y_1 MRSD protein; flavoprot 42.0 8.7 0.0003 29.5 1.2 88 49-136 78-185 (194)
69 4pga_A Glutaminase-asparaginas 41.8 38 0.0013 28.1 5.2 36 52-90 90-125 (337)
70 3ca8_A Protein YDCF; two domai 41.3 24 0.00081 28.3 3.8 38 51-93 35-73 (266)
71 1o7j_A L-asparaginase; atomic 41.1 57 0.002 26.8 6.2 36 52-90 85-120 (327)
72 2bon_A Lipid kinase; DAG kinas 40.8 22 0.00077 28.8 3.6 38 51-90 81-118 (332)
73 2bkx_A Glucosamine-6-phosphate 40.3 1.2E+02 0.004 23.0 7.6 41 53-94 28-70 (242)
74 2gek_A Phosphatidylinositol ma 40.3 43 0.0015 26.5 5.2 71 44-135 274-347 (406)
75 1agx_A Glutaminase-asparaginas 39.7 56 0.0019 26.9 5.9 36 52-90 82-117 (331)
76 3hyn_A Putative signal transdu 39.5 86 0.0029 24.1 6.5 94 39-134 66-172 (189)
77 2wlt_A L-asparaginase; hydrola 39.0 67 0.0023 26.4 6.3 36 52-90 85-120 (332)
78 3lhi_A Putative 6-phosphogluco 38.8 48 0.0016 25.7 5.1 44 48-94 29-72 (232)
79 1jv1_A Glcnac1P uridyltransfer 38.3 34 0.0012 30.0 4.6 67 54-133 103-180 (505)
80 1wsa_A Asparaginase, asparagin 38.1 70 0.0024 26.3 6.3 36 52-90 83-118 (330)
81 2x0d_A WSAF; GT4 family, trans 36.9 78 0.0027 26.2 6.5 70 43-134 305-376 (413)
82 3nwp_A 6-phosphogluconolactona 36.8 59 0.002 25.2 5.4 84 48-134 32-122 (233)
83 2qzs_A Glycogen synthase; glyc 36.2 97 0.0033 25.4 6.9 74 46-135 360-439 (485)
84 3u43_A Colicin-E2 immunity pro 35.4 19 0.00066 24.7 2.0 45 90-138 29-78 (94)
85 3pki_A NAD-dependent deacetyla 34.9 48 0.0017 27.9 4.8 96 43-160 197-294 (355)
86 2oeg_A UTP-glucose-1-phosphate 34.3 22 0.00075 31.3 2.7 65 54-132 76-144 (505)
87 1oi7_A Succinyl-COA synthetase 34.2 1.6E+02 0.0054 23.4 7.7 87 41-134 186-286 (288)
88 1zq1_A Glutamyl-tRNA(Gln) amid 33.3 92 0.0031 26.9 6.4 37 52-90 168-204 (438)
89 4gud_A Imidazole glycerol phos 33.2 41 0.0014 25.0 3.8 18 50-69 38-55 (211)
90 3oy2_A Glycosyltransferase B73 33.0 1E+02 0.0035 24.5 6.4 83 37-136 256-354 (413)
91 1eiw_A Hypothetical protein MT 32.4 50 0.0017 23.0 3.9 72 50-136 36-109 (111)
92 2nu8_A Succinyl-COA ligase [AD 32.1 1.4E+02 0.0046 23.7 7.0 81 41-134 186-286 (288)
93 3oc9_A UDP-N-acetylglucosamine 31.9 70 0.0024 27.3 5.4 83 41-134 22-115 (405)
94 3fro_A GLGA glycogen synthase; 31.6 1.1E+02 0.0039 24.1 6.4 80 35-136 311-394 (439)
95 1vl1_A 6PGL, 6-phosphogluconol 31.2 1.6E+02 0.0055 22.6 7.1 40 52-94 44-83 (232)
96 4ecm_A Glucose-1-phosphate thy 30.8 69 0.0024 24.6 4.9 62 55-133 26-91 (269)
97 3ksm_A ABC-type sugar transpor 30.0 1E+02 0.0035 22.8 5.6 37 49-90 55-92 (276)
98 3lwd_A 6-phosphogluconolactona 29.1 70 0.0024 24.7 4.6 43 49-94 29-71 (226)
99 3lp6_A Phosphoribosylaminoimid 27.9 2E+02 0.0067 21.8 6.7 55 41-102 46-106 (174)
100 1rq8_A Conserved hypothetical 27.7 53 0.0018 22.8 3.3 57 76-134 11-68 (104)
101 2ejb_A Probable aromatic acid 27.1 51 0.0017 24.9 3.4 81 50-132 79-170 (189)
102 1h7e_A 3-deoxy-manno-octuloson 26.9 92 0.0031 23.2 4.9 57 55-133 4-61 (245)
103 3l6u_A ABC-type sugar transpor 26.1 1.2E+02 0.004 22.7 5.4 38 48-90 60-97 (293)
104 1mvl_A PPC decarboxylase athal 26.0 32 0.0011 26.6 2.1 87 49-135 93-197 (209)
105 3g1w_A Sugar ABC transporter; 25.9 1.3E+02 0.0043 22.8 5.6 38 48-90 57-94 (305)
106 3sqn_A Conserved domain protei 25.6 16 0.00055 31.6 0.2 15 51-65 397-411 (485)
107 3tha_A Tryptophan synthase alp 25.5 81 0.0028 25.1 4.4 42 60-108 70-116 (252)
108 3tpf_A Otcase, ornithine carba 25.3 2.7E+02 0.0094 22.6 7.7 17 6-22 56-72 (307)
109 3l49_A ABC sugar (ribose) tran 25.2 91 0.0031 23.4 4.6 38 48-90 57-94 (291)
110 3gd5_A Otcase, ornithine carba 24.4 2.9E+02 0.01 22.6 8.0 83 6-89 68-164 (323)
111 1m6e_X S-adenosyl-L-methionnin 24.3 58 0.002 27.2 3.5 42 93-134 225-269 (359)
112 1ezi_A CMP-N-acetylneuraminic 24.0 74 0.0025 23.5 3.8 58 55-134 6-64 (228)
113 1wv2_A Thiazole moeity, thiazo 23.9 52 0.0018 26.7 2.9 25 50-74 183-207 (265)
114 8abp_A L-arabinose-binding pro 23.7 1.2E+02 0.0042 22.8 5.1 38 48-90 53-90 (306)
115 1jo0_A Hypothetical protein HI 23.3 53 0.0018 22.4 2.6 55 79-135 15-70 (98)
116 3m9w_A D-xylose-binding peripl 23.1 1.2E+02 0.0042 23.1 5.0 38 48-90 54-91 (313)
117 3rot_A ABC sugar transporter, 23.1 1.5E+02 0.005 22.5 5.5 38 48-90 57-94 (297)
118 3gbv_A Putative LACI-family tr 23.0 1.2E+02 0.004 22.8 4.8 38 48-90 65-102 (304)
119 1sbz_A Probable aromatic acid 22.9 71 0.0024 24.4 3.5 80 51-132 76-166 (197)
120 1rzu_A Glycogen synthase 1; gl 22.6 1.5E+02 0.0052 24.1 5.8 75 45-135 358-438 (485)
121 3e15_A Glucose-6-phosphate 1-d 22.5 90 0.0031 25.6 4.2 44 52-96 59-103 (312)
122 2yqc_A UDP-N-acetylglucosamine 22.3 35 0.0012 29.7 1.8 68 55-133 105-183 (486)
123 2f6u_A GGGPS, (S)-3-O-geranylg 22.2 95 0.0033 24.3 4.2 41 47-89 27-68 (234)
124 3vnd_A TSA, tryptophan synthas 22.1 1.1E+02 0.0038 24.3 4.7 44 61-108 75-123 (267)
125 3dmy_A Protein FDRA; predicted 22.0 3.9E+02 0.013 23.1 8.5 87 43-138 317-415 (480)
126 2qtd_A Uncharacterized protein 22.0 95 0.0032 20.5 3.7 13 53-65 55-67 (105)
127 2yv1_A Succinyl-COA ligase [AD 22.0 2.5E+02 0.0085 22.3 6.8 86 41-134 192-291 (294)
128 2vk2_A YTFQ, ABC transporter p 21.9 1.5E+02 0.0052 22.5 5.3 37 49-90 55-91 (306)
129 3k35_A NAD-dependent deacetyla 21.8 1.3E+02 0.0046 24.7 5.2 75 43-138 197-272 (318)
130 1m3s_A Hypothetical protein YC 21.8 1.9E+02 0.0065 20.5 5.6 39 3-64 97-135 (186)
131 2yv2_A Succinyl-COA synthetase 21.7 3E+02 0.01 21.8 7.8 89 41-135 193-295 (297)
132 3uug_A Multiple sugar-binding 21.4 1.6E+02 0.0054 22.5 5.4 38 48-90 55-92 (330)
133 3l2b_A Probable manganase-depe 21.3 1.8E+02 0.0063 21.5 5.6 93 35-134 122-215 (245)
134 4ekn_B Aspartate carbamoyltran 21.2 3.3E+02 0.011 22.0 8.2 87 6-94 60-162 (306)
135 2hi6_A UPF0107 protein AF0055; 21.1 42 0.0014 24.6 1.7 44 52-99 49-92 (141)
136 3g23_A Peptidase U61, LD-carbo 21.0 1.2E+02 0.0039 24.2 4.5 65 40-110 51-120 (274)
137 2fn9_A Ribose ABC transporter, 20.8 1.6E+02 0.0055 22.0 5.2 37 49-90 55-91 (290)
138 3nav_A Tryptophan synthase alp 20.7 1.2E+02 0.0042 24.1 4.7 45 60-108 76-125 (271)
139 1yt5_A Inorganic polyphosphate 20.7 98 0.0034 24.0 4.0 32 52-90 41-72 (258)
140 2iuy_A Avigt4, glycosyltransfe 20.6 1.6E+02 0.0054 22.7 5.2 72 44-136 223-307 (342)
141 3c98_A Syntaxin-binding protei 20.4 72 0.0025 28.1 3.5 40 54-96 548-587 (606)
142 1vlv_A Otcase, ornithine carba 20.4 3.6E+02 0.012 22.1 7.9 99 6-106 78-190 (325)
143 1tzf_A Glucose-1-phosphate cyt 20.4 93 0.0032 23.3 3.7 63 56-134 5-69 (259)
144 4gdh_A DJ-1, uncharacterized p 20.3 90 0.0031 23.1 3.6 35 56-90 76-115 (194)
145 2ioy_A Periplasmic sugar-bindi 20.2 1.7E+02 0.0058 21.9 5.2 37 49-90 54-90 (283)
No 1
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=100.00 E-value=5.7e-46 Score=300.27 Aligned_cols=154 Identities=62% Similarity=1.049 Sum_probs=132.8
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCC
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI 80 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~ 80 (164)
|+|+++||+++||+||||+|+.+.++|..++.+++++++++|++||.+|+++|||||+||||+|||||+||+|||.|+|.
T Consensus 54 M~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~ 133 (216)
T 1ydh_A 54 MGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGI 133 (216)
T ss_dssp HHHHHHHHHHTTCCEEEEEEGGGHHHHCCSSCCSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHcCCcEEEEechhcCccccccCCCCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHhhcCCCCCccccceeccccccc
Q 031213 81 HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEYVPLHDGVVAKVKWEAEQVEL 154 (164)
Q Consensus 81 ~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~~~~~~~~~~~~~w~~~~~~~ 154 (164)
|+|||+++|.+|||+++++||++|+++|||++++.+.+.+++|++|+++.|+++.+.+.+....++|..++...
T Consensus 134 ~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 207 (216)
T 1ydh_A 134 HKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVEELGD 207 (216)
T ss_dssp CCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEESSHHHHHHHHHHCC-------------------
T ss_pred cCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEeCCHHHHHHHHHHhcccccccccccccchhhccC
Confidence 99999999999999999999999999999999999999999999999999999988888777889999876544
No 2
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=100.00 E-value=4e-45 Score=295.11 Aligned_cols=156 Identities=76% Similarity=1.223 Sum_probs=123.2
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCC
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI 80 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~ 80 (164)
|+++++||+++||+||||+|..+.+++..++.+++++++++|++||++|+++|||||++|||+|||||+||++||.|+|+
T Consensus 58 M~aa~~gAl~~GG~tiGVlP~~~~~~e~~~~~~~~~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~ 137 (215)
T 2a33_A 58 MGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGI 137 (215)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCC--------CCEEEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHcCCcEEEEcchHhcchhhccCCCCceeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCC
Confidence 89999999999999999999999887777788889999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHhhcCCCCCccccceeccccccccc
Q 031213 81 HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEYVPLHDGVVAKVKWEAEQVELNT 156 (164)
Q Consensus 81 ~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~ 156 (164)
|+|||+++|.+|||++|++|+++|+++|||++++.+.+.+++|++|+++.|+++.++..++.+.++|..++.+|.+
T Consensus 138 ~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (215)
T 2a33_A 138 HDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEMERIGYSS 213 (215)
T ss_dssp CCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEESSHHHHHHHHHC-----------------------
T ss_pred CCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEeCCHHHHHHHHHHhcCccccccccccccccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999998888777889999998877643
No 3
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=100.00 E-value=2.1e-44 Score=285.98 Aligned_cols=132 Identities=33% Similarity=0.588 Sum_probs=128.3
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCC
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI 80 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~ 80 (164)
|+|+++||+++||+||||+|..+..++.+|+.+++++++++|++||.+|+++|||||+||||+|||||+||+|||.|+|.
T Consensus 57 M~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~ 136 (189)
T 3sbx_A 57 MGAVSSAARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGM 136 (189)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTTTTTTTBCTTCSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCcEEEEcCchhhhcccCCCCCCeeEEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcc
Confidence 89999999999999999999998888888888999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHH
Q 031213 81 HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLE 132 (164)
Q Consensus 81 ~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~ 132 (164)
|+|||+|+|.+|||+++++|+++|+++|||++++.+.+.+++|++|++++|+
T Consensus 137 ~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 137 HDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDALQACA 188 (189)
T ss_dssp CCCCEEEECTTCTTHHHHHHHHHHHHTTSSCHHHHHHEEEESSHHHHHHHHC
T ss_pred cCCCEEEecCCccchHHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999874
No 4
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=100.00 E-value=7.5e-44 Score=284.77 Aligned_cols=132 Identities=39% Similarity=0.651 Sum_probs=128.7
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCC
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI 80 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~ 80 (164)
|++++++|+++||+||||+|..+..++.+|+.+++++++++|++||.+|+++|||||+||||+|||||+||+|||.|+|+
T Consensus 66 M~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~ 145 (199)
T 3qua_A 66 MGAVAQAARAKGGHTVGVIPKALVHRELADVDAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGM 145 (199)
T ss_dssp HHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTTSSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCcEEEEeCchhhhccccCCCCCeeEEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhcc
Confidence 89999999999999999999998888888889999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHH
Q 031213 81 HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLE 132 (164)
Q Consensus 81 ~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~ 132 (164)
|+|||+|+|.+|||+++++|+++|+++|||++++.+.+.+++|++|+++.|+
T Consensus 146 ~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~~~e~~~~l~ 197 (199)
T 3qua_A 146 HDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQRAMDSLVVVDNVEAALEACA 197 (199)
T ss_dssp CCCCEEEECTTSTTHHHHHHHHHTTTTTSSCHHHHHTSEEESSHHHHHHHHS
T ss_pred CCCCEEEEcCCccchHHHHHHHHHHHCCCCCHHHCCeEEEeCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999986
No 5
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=100.00 E-value=9.8e-44 Score=282.19 Aligned_cols=138 Identities=36% Similarity=0.785 Sum_probs=130.6
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCC
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI 80 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~ 80 (164)
|+|+++||+++||+||||+|+.+.+++.+++.+++.+++.+|++||++|++.|||||+||||+|||||+||+|||.|+|+
T Consensus 46 M~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~ 125 (191)
T 1t35_A 46 MGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGI 125 (191)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEEEEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSS
T ss_pred HHHHHHHHHHcCCeEEEEeCchhcccccccCCCCccccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999888888888899999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHhhcCCC
Q 031213 81 HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEYVPLH 138 (164)
Q Consensus 81 ~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~~~~~ 138 (164)
|+|||+++|.+|||+++++|+++|+++|||++++.+.+.+++|++|+++.|+++.++.
T Consensus 126 ~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~~~~~~~~~~~e~~~~l~~~~~~~ 183 (191)
T 1t35_A 126 HQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQMQNYSYPI 183 (191)
T ss_dssp CCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHHHHEEEESSHHHHHHHHHTC----
T ss_pred CCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999999999999987654
No 6
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=2.1e-38 Score=256.13 Aligned_cols=135 Identities=26% Similarity=0.391 Sum_probs=120.6
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCC
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI 80 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~ 80 (164)
|+++++||+++||+||||+|.. ..++.+++.+++.+.+.+|++||++|.+.|||||++|||+|||||+||+|+|.|+|.
T Consensus 81 M~aa~~gAl~~gG~~iGV~~~~-P~~~~~~~~~t~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~ 159 (217)
T 1wek_A 81 MEAVNRGAYEAGGVSVGLNIEL-PHEQKPNPYQTHALSLRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEK 159 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEEECC-TTCCCCCSCCSEEEEESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCCEEEEeeCC-cchhhccccCCcCcccCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCC
Confidence 8999999999999999996652 223445666778888999999999999999999999999999999999999999996
Q ss_pred -CCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHhhcCC
Q 031213 81 -HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEYVPL 137 (164)
Q Consensus 81 -~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~~~~ 137 (164)
++|||+++|. +||+++++|+++|+++||+++++.+.+.+++|++|+++.|+++.++
T Consensus 160 ~~~kPvvll~~-~~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~~~~~e~~~~l~~~~~~ 216 (217)
T 1wek_A 160 VHRFPVFLLDR-GYWEGLVRWLAFLRDQKAVGPEDLQLFRLTDEPEEVVQALKAEAPP 216 (217)
T ss_dssp SCCCCEEEECH-HHHHHHHHHHHHHHHTTSSCTTGGGGSEEESCHHHHHHHHHC----
T ss_pred CCCCCEEEeCc-ccchhHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHHHHhcCC
Confidence 5799999998 6999999999999999999999999999999999999999987653
No 7
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=1.5e-37 Score=242.66 Aligned_cols=124 Identities=26% Similarity=0.381 Sum_probs=115.6
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCccccc-ccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcC
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKE-ITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLG 79 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e-~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg 79 (164)
|++++++|+++||+||||+|+.+.|++ .+|+.+++.+++.+|++||++|.+.||+||++|||+|||||+||+|+|.|+|
T Consensus 45 M~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~~~~~~~~~f~~Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g 124 (171)
T 1weh_A 45 MEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVDLELPAATLPQRIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLR 124 (171)
T ss_dssp HHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCSEECCCSSHHHHHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCcEEEEeccccCcccccccCCCceeeecCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhC
Confidence 899999999999999999999877777 4566677888899999999999999999999999999999999999999999
Q ss_pred C-CCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHh
Q 031213 80 I-HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEE 133 (164)
Q Consensus 80 ~-~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~ 133 (164)
. ++|| +++| |||++++ +++||+++++.+.+.+++|++|+++.|++
T Consensus 125 ~~~~kP-vll~--g~~~~l~------~~~gfi~~~~~~~~~~~~~~~e~~~~l~~ 170 (171)
T 1weh_A 125 RGVGRP-LAVD--PYWLGLL------KAHGEIAPEDVGLLRVVADEEDLRRFLRS 170 (171)
T ss_dssp SSCSCC-EEEC--GGGGGTC------CCBTTBCHHHHTTSEECCSHHHHHHHHHT
T ss_pred ccCCCe-EEEC--cchhhhH------hhcCCCChhhcCeEEEeCCHHHHHHHHHh
Confidence 8 6899 9998 8999987 78999999999999999999999999875
No 8
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=100.00 E-value=7.9e-37 Score=266.56 Aligned_cols=144 Identities=22% Similarity=0.344 Sum_probs=127.2
Q ss_pred ChHHHHHHHhc-------CCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHH
Q 031213 1 MGLVSHVVHRG-------GGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVI 73 (164)
Q Consensus 1 Mgava~ga~~~-------GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~ 73 (164)
|++++++|..+ ||+||||+|..+..+|.+++.+++++++++|++||..|++.|||||+||||+|||||+||+|
T Consensus 189 MeAa~aGA~~a~a~qr~aGG~vIGIiP~~L~~~E~~N~~vteliiv~~m~~RK~~mv~~SDAfIaLPGG~GTLEELfE~L 268 (462)
T 3gh1_A 189 MEGPMKGAAVGHAKQRYSEYRYLGLTEPSIIAAEPPNPIVNELVIMPDIEKRLEAFVRMAHGIIIFPGGPGTAEELLYIL 268 (462)
T ss_dssp GTHHHHHHHHHHHHTTCTTCCEEEEECTTTTTTSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCCeEEEEccchhhhhhccCCCCCeeEEeCCHHHHHHHHHHHCCEEEEcCCCcchHHHHHHHH
Confidence 88888888775 99999999999888888888899999999999999999999999999999999999999999
Q ss_pred HHHHcC---CCCccEEEEec---CccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHhhcCC------CCCc
Q 031213 74 TWAQLG---IHDKPVGLINV---DGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEYVPL------HDGV 141 (164)
Q Consensus 74 t~~qlg---~~~kPivlln~---~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~~~~------~~~~ 141 (164)
||.|++ .|+|||+|+|. +|||+++++||++++.++. ....+.++||++|+++.|+++.+. ....
T Consensus 269 Tw~qLgtgk~h~kPIVLln~~~~~gYwd~Ll~fL~~~v~eg~----~~~~~iv~DdpeEvl~~i~~~~~~v~~~r~~~~d 344 (462)
T 3gh1_A 269 GIMMHPENADQPMPIVLTGPKQSEAYFRSLDKFITDTLGEAA----RKHYSIAIDNPAEAARIMSNAMPLVRQHRKDKED 344 (462)
T ss_dssp HHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHHCGGG----GGGCEEEESCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcccCcCCCCCEEEEcCCCcccHHHHHHHHHHHHhhhhh----hhccEEEcCCHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999888 78999999998 7999999999999988763 455678999999999999876521 2225
Q ss_pred cccceec
Q 031213 142 VAKVKWE 148 (164)
Q Consensus 142 ~~~~~w~ 148 (164)
++++||.
T Consensus 345 ay~fnw~ 351 (462)
T 3gh1_A 345 AYSFNWS 351 (462)
T ss_dssp CSSSCCS
T ss_pred ceeeeee
Confidence 6789997
No 9
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=100.00 E-value=8e-35 Score=255.03 Aligned_cols=143 Identities=22% Similarity=0.347 Sum_probs=122.0
Q ss_pred ChHHHHHHHh------cCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHH
Q 031213 1 MGLVSHVVHR------GGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVIT 74 (164)
Q Consensus 1 Mgava~ga~~------~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t 74 (164)
.++++.++.+ +||+||||+|..+..+|.+|+.+++++++++|++||..|++.|||||+||||+|||||+||+|+
T Consensus 188 Eaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~~E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT 267 (460)
T 3bq9_A 188 KGPMKGATIGHAKQRVEGGRYLGLTEPGIIAAEPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLG 267 (460)
T ss_dssp THHHHHHHHHHHHTTCSSCCEEEEECTTTTTTSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHH
T ss_pred hHHHhhHHhhcccccCCCCEEEEEeChhhhhhhhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHH
Confidence 0455555555 5999999999999988889999999999999999999999999999999999999999999999
Q ss_pred HHHcCC---CCccEEEEe---cCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHhh-------cCCCCCc
Q 031213 75 WAQLGI---HDKPVGLIN---VDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEY-------VPLHDGV 141 (164)
Q Consensus 75 ~~qlg~---~~kPivlln---~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~-------~~~~~~~ 141 (164)
|.|++. |+|||+++| .+|||+++++|++.++.+ ++....+.+++|++|+++.++++ +. ....
T Consensus 268 ~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~l~~~l~~----~~~~~~iiv~ddpeEal~~l~~~~~~v~~~y~-~~~~ 342 (460)
T 3bq9_A 268 ILMHPDNQRQSLPVILTGPASSRDYFEALDEFIGATIGD----EARQLYKIIIDDPAAVAQHMHAGMAAVKQYRR-DSGD 342 (460)
T ss_dssp HHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHTCT----TGGGGCEEEESCHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred HHhhccccCCCCCEEEEecCCccchhhHHHHHHHHHhcc----hhhcCcEEEeCCHHHHHHHHHHHHHHHHHHhc-ccCc
Confidence 999876 899999998 579999999999988776 44555678999999999998652 33 2235
Q ss_pred cccceec
Q 031213 142 VAKVKWE 148 (164)
Q Consensus 142 ~~~~~w~ 148 (164)
.+++||.
T Consensus 343 ry~~nW~ 349 (460)
T 3bq9_A 343 AYYFNWT 349 (460)
T ss_dssp CSSSCCS
T ss_pred eeeeccc
Confidence 6789998
No 10
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=99.98 E-value=6.6e-33 Score=220.80 Aligned_cols=122 Identities=30% Similarity=0.416 Sum_probs=109.2
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCcccccccCCccceEeec--CCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHc
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPV--ADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQL 78 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~--~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~ql 78 (164)
|++++++|+++||+||||+|.. ...+++.++.++ .+|++||++|++.|||||++|||+|||+|++++++
T Consensus 70 M~aa~~gAl~~GG~~iGVlP~e-----~~~~~~~~~~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~---- 140 (195)
T 1rcu_A 70 MELVSQGVREAGGTVVGILPDE-----EAGNPYLSVAVKTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYA---- 140 (195)
T ss_dssp HHHHHHHHHHTTCCEEEEESTT-----CCCCTTCSEEEECCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHcCCcEEEEeCCc-----ccCCCCcceeeecCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHh----
Confidence 8999999999999999999983 223556777765 69999999999999999999999999999999998
Q ss_pred CCCCccEEEEecCccchHHHHHHHHHHHcC-CCCccccCCeEEcCCHHHHHHHHHhhcC
Q 031213 79 GIHDKPVGLINVDGYYNSLLNFIDKAVDDG-FISPSQRSILVSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 79 g~~~kPivlln~~gfw~~l~~~l~~~~~eg-fi~~~~~~~i~~~~~~ee~~~~l~~~~~ 136 (164)
++|||+++|.+|||+++ |+.++++| ||++++.+.+.+++|++|+++.|+++..
T Consensus 141 --~~kPV~lln~~g~w~~~---l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l~~~~~ 194 (195)
T 1rcu_A 141 --LGKPVILLRGTGGWTDR---ISQVLIDGKYLDNRRIVEIHQAWTVEEAVQIIEQILG 194 (195)
T ss_dssp --TTCCEEEETTSCHHHHH---GGGGCBTTTBSSTTCCSCEEEESSHHHHHHHHHTC--
T ss_pred --cCCCEEEECCCCccHHH---HHHHHHcCCcCCHHHcCeEEEeCCHHHHHHHHHHHhc
Confidence 48999999999999986 46788999 9999999999999999999999988643
No 11
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=99.95 E-value=8.8e-30 Score=199.84 Aligned_cols=115 Identities=17% Similarity=0.248 Sum_probs=102.0
Q ss_pred ChHHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCC
Q 031213 1 MGLVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI 80 (164)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~ 80 (164)
|++++++|+++||+||||+|.. .++.+++.+++++++.+|++||++|.+.||+||++|||+|||+|+++++.
T Consensus 58 m~aa~~gAl~~gG~tigVlP~~--~~~~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~------ 129 (176)
T 2iz6_A 58 MHEAMKGAKEAGGTTIGVLPGP--DTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALK------ 129 (176)
T ss_dssp HHHHHHHHHHTTCCEEEEECC-------CCTTCSEEEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHH------
T ss_pred hHHHHHHHHHcCCEEEEEeCch--hhhhhccCCceeEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHH------
Confidence 8999999999999999999987 44567777888889999999999999999999999999999999999993
Q ss_pred CCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHhhc
Q 031213 81 HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEYV 135 (164)
Q Consensus 81 ~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~~ 135 (164)
++|||+++|. |+ +++||+++++.+.+.+++|++|+++.|+++.
T Consensus 130 ~~kpV~~l~~---~~---------~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 130 AKKPVVLLGT---QP---------EAEKFFTSLDAGLVHVAADVAGAIAAVKQLL 172 (176)
T ss_dssp TTCCEEEESC---CH---------HHHHHHHHHCTTTEEEESSHHHHHHHHHHHH
T ss_pred hCCcEEEEcC---cc---------cccccCChhhcCeEEEcCCHHHHHHHHHHHH
Confidence 5999999985 76 5667888999999999999999999999875
No 12
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=96.50 E-value=0.015 Score=48.29 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCEEEEEeCCCcc---cccccCCcc-----------ce-----EeecCCHHHHHHHHHHhCCeEEEccCC-
Q 031213 3 LVSHVVHRGGGHVLGIIPKTLM---NKEITGETV-----------GE-----VKPVADMHQRKAEMARNSDCFIALPGG- 62 (164)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~---~~e~~~~~~-----------~e-----l~i~~~m~~Rk~~m~~~sDafIvlPGG- 62 (164)
++-++|+++||++|+|++..+. |++ |..+ +| -.....|..|++++.-.||++||.--+
T Consensus 149 ~AH~~aL~~~g~TIaVl~~Gld~~YP~~--n~~L~~~i~~~GlliSE~ppg~~p~~~~Fp~RNRiIagLS~~~vVvEA~~ 226 (288)
T 3uqz_A 149 AAHMAALQNGGKTIAVIGTGLDVFYPKA--NKRLQDYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKM 226 (288)
T ss_dssp HHHHHHHHHTCCEEEECSSCTTCCSSGG--GHHHHHHHHHHSEEEESSCTTCCCCTTHHHHHHHHHHHHCSEEEEESCCT
T ss_pred HHHHHHHhcCCCEEEEecccccccCchh--hHHHHHHhcccCcEeeccCCCCCccccccHHHHHHHHHcCCeEEEEecCC
Confidence 4568899999999999998874 322 1110 11 111347899999999999999998765
Q ss_pred -CcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHH
Q 031213 63 -YGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKL 131 (164)
Q Consensus 63 -~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l 131 (164)
-|||.=.-.++.. .|||..+-. ...++.-+-...++++|- ..+.+++|+++.+
T Consensus 227 ~SGsliTA~~Ale~------gR~VfavPG-~i~~~~s~G~n~LI~~GA---------~lv~~~~Dil~el 280 (288)
T 3uqz_A 227 RSGSLITCERAMEE------GRDVFAIPG-SILDGLSDGCHHLIQEGA---------KLVTSGQDVLAEF 280 (288)
T ss_dssp TCHHHHHHHHHHHT------TCEEEECCC-CSSSSTTHHHHHHHHTTC---------EECSSHHHHHHHC
T ss_pred CChHHHHHHHHHHc------CCeEEEECC-CCCCccchHHHHHHHCCC---------EEECCHHHHHHHh
Confidence 6777655555543 789887743 244554455567777773 5678899988866
No 13
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=96.35 E-value=0.012 Score=50.59 Aligned_cols=114 Identities=10% Similarity=0.047 Sum_probs=80.7
Q ss_pred hHHHHHHHhcCCEEEEEeCCCcc---ccccc--CCcc---ceEee----------cCCHHHHHHHHHHhCCeEEEccCC-
Q 031213 2 GLVSHVVHRGGGHVLGIIPKTLM---NKEIT--GETV---GEVKP----------VADMHQRKAEMARNSDCFIALPGG- 62 (164)
Q Consensus 2 gava~ga~~~GG~viGIiP~~~~---~~e~~--~~~~---~el~i----------~~~m~~Rk~~m~~~sDafIvlPGG- 62 (164)
.++-++|+++| +|+|++..+. |++-. ...+ .-+++ ..+|..|++++.-.|+++||.=.+
T Consensus 170 ~~AH~~AL~~g--TIaVLg~Gld~~YP~~n~~L~~~I~~~~G~liSE~ppg~~p~~~~Fp~RNRiIagLS~~vvVvEA~~ 247 (382)
T 3maj_A 170 QAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAY 247 (382)
T ss_dssp HHHHHHHTTTC--EEEECSSCTTSCSSGGGHHHHHHHHHTTCEEEECSCTTCCCCTTHHHHHHHHHHHHCSCEEECCCCT
T ss_pred HHHHHHHHhCC--eEEEECCCcCccCCHhhHHHHHHHHHhCCcEEecCCCCCCCCccccHHHHHHHHHhCCceEEEecCC
Confidence 46678888876 9999998763 32210 0001 01222 236899999999999999998777
Q ss_pred -CcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHHHHHh
Q 031213 63 -YGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEE 133 (164)
Q Consensus 63 -~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~ 133 (164)
.|||...-.++.+ .|||+.+-.. -.++.-.-.+.++++|- ..+.+++++++.+..
T Consensus 248 kSGsliTA~~Ale~------gR~VfavPG~-i~~~~s~G~n~LI~~GA---------~lv~~~~Dil~~l~~ 303 (382)
T 3maj_A 248 RSGSLITARRAADQ------GREVFAVPGS-PLDPRAAGTNDLIKQGA---------TLITSASDIVEAVAS 303 (382)
T ss_dssp TCTHHHHHHHHHHH------TCCEEECCCC-TTCGGGHHHHHHHHTTC---------EECSSHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHh------CCcEEEEcCC-CCCcccccHHHHHHCCC---------EEECCHHHHHHHhhh
Confidence 7999999988876 8999887532 45555555677887773 568899999998854
No 14
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=95.11 E-value=0.061 Score=40.58 Aligned_cols=81 Identities=16% Similarity=0.200 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhCCeEEEccC--CCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeE
Q 031213 42 MHQRKAEMARNSDCFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILV 119 (164)
Q Consensus 42 m~~Rk~~m~~~sDafIvlPG--G~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~ 119 (164)
.++|...+++.||++|+.++ ..||.-|+-.+..+ .|||+++..+.- .. -+..|+ +|.-.....+.+.
T Consensus 67 i~~~d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~al------gKPVi~l~~~~~-~~---~~n~M~-~g~~~~~~~~~~~ 135 (165)
T 2khz_A 67 IHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVAL------GKPILCLFRPQS-GR---VLSAMI-RGAADGSRFQVWD 135 (165)
T ss_dssp HHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHT------CSSEEEEECTTT-TC---CCCHHH-HHTCCSSSEEEEE
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCHHHHHHHHHHC------CCEEEEEEcCCC-CC---cchhhh-cccCccceeEEEe
Confidence 47888899999999999975 67999999999876 899999865431 01 111222 2221112233333
Q ss_pred EcCCHHHHHHHHHhhc
Q 031213 120 SAPNAKELVQKLEEYV 135 (164)
Q Consensus 120 ~~~~~ee~~~~l~~~~ 135 (164)
+ |.+|+.+.|+++.
T Consensus 136 y--~~~el~~~l~~~~ 149 (165)
T 2khz_A 136 Y--AEGEVETMLDRYF 149 (165)
T ss_dssp C--CTTTHHHHHHHHH
T ss_pred c--CHHHHHHHHHHHH
Confidence 3 6777777776653
No 15
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=94.71 E-value=0.028 Score=42.63 Aligned_cols=89 Identities=19% Similarity=0.167 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHhCCeEEEc--c-----CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHH-cCCCC
Q 031213 40 ADMHQRKAEMARNSDCFIAL--P-----GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVD-DGFIS 111 (164)
Q Consensus 40 ~~m~~Rk~~m~~~sDafIvl--P-----GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~-egfi~ 111 (164)
...+++....++.||++|+. | =-.||.-|+-.++.+ .|||+++..+ + .++.+......+ +|+.-
T Consensus 55 ~~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~Al------gKPVi~l~~d-~-r~~~~~~~~~~d~~g~~v 126 (161)
T 2f62_A 55 LDIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAAL------NKMVLTFTSD-R-RNMREKYGSGVDKDNLRV 126 (161)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHT------TCEEEEECSC-C-SCHHHHHTSSBCTTSCBC
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHC------CCEEEEEEcC-c-hhhhhhcccccccccccc
Confidence 35578888999999999999 4 357999999999987 8999998653 2 222221110000 11000
Q ss_pred cc--------ccCCeEEcCCHHHHHHHHHhhcC
Q 031213 112 PS--------QRSILVSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 112 ~~--------~~~~i~~~~~~ee~~~~l~~~~~ 136 (164)
+. -...+.+.++.+++++.|.+...
T Consensus 127 edf~~~~NLMl~~~~~~~~~~~~~l~~l~~~~~ 159 (161)
T 2f62_A 127 EGFGLPFNLMLYDGVEVFDSFESAFKYFLANFP 159 (161)
T ss_dssp CCSSCSSCGGGCCSSCEESSHHHHHHHHHHHSC
T ss_pred cccCCcchhhhhhhheeeCCHHHHHHHHHHhhc
Confidence 00 00111267999999999987654
No 16
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=94.14 E-value=0.79 Score=34.75 Aligned_cols=86 Identities=20% Similarity=0.139 Sum_probs=58.4
Q ss_pred HHHHHHHhcCCEEEEEeCCCcccccc-cCCccceEe-ecCCHHHHHHHHHHhCCeEEEcc-CCCcCHHHHHHHHHHHHcC
Q 031213 3 LVSHVVHRGGGHVLGIIPKTLMNKEI-TGETVGEVK-PVADMHQRKAEMARNSDCFIALP-GGYGTLEELLEVITWAQLG 79 (164)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e~-~~~~~~el~-i~~~m~~Rk~~m~~~sDafIvlP-GG~GTLdEl~e~~t~~qlg 79 (164)
|+-+.|+++|=..-|..|......+. -+..|.-.. ...++..|....++.||+-++|- |..-.=.++...++.
T Consensus 22 aALd~A~~~gi~~gGwcP~GR~aEDG~ip~~Y~L~E~~~~~y~~Rt~~NV~DSDgTLI~~~g~lsGGT~lT~~~a~---- 97 (158)
T 3imk_A 22 AALDFAIKHHIPYGGWVPKGRLAEGGRVPETYQLQEMPTSDYSKRTEKNVLDSDGTLIISHGILKGGSALTEFFAE---- 97 (158)
T ss_dssp HHHHHHHHTTCCEECEECGGGCCTTSSCCTTSCCEECSSCCHHHHHHHHHHTSSEEEEEESSSCCHHHHHHHHHHH----
T ss_pred HHHHHHHHcCCCcceecCCCcccccCCCCccccccccCCCCHHHHHHHhhhhcCeEEEEecCCCCCchHHHHHHHH----
Confidence 56678888898888999987654332 223332111 25788999999999999966665 765333344444443
Q ss_pred CCCccEEEEecCc
Q 031213 80 IHDKPVGLINVDG 92 (164)
Q Consensus 80 ~~~kPivlln~~g 92 (164)
.|.||+.+++.+.
T Consensus 98 ~~~KP~l~i~l~~ 110 (158)
T 3imk_A 98 QYKKPCLHIDLDR 110 (158)
T ss_dssp HTTCCEEEEETTT
T ss_pred HhCCCEEEEeccc
Confidence 5799999999764
No 17
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=93.69 E-value=0.069 Score=40.25 Aligned_cols=45 Identities=18% Similarity=0.042 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHhCCeEEEccCC----CcCHHHHHHHHHHHHcCCCCccEEEEecC
Q 031213 41 DMHQRKAEMARNSDCFIALPGG----YGTLEELLEVITWAQLGIHDKPVGLINVD 91 (164)
Q Consensus 41 ~m~~Rk~~m~~~sDafIvlPGG----~GTLdEl~e~~t~~qlg~~~kPivlln~~ 91 (164)
..+++....++.||++|+...| .||.-|+-.++.+ .|||+++..+
T Consensus 67 ~I~~~D~~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~------gkPVv~~~~~ 115 (157)
T 1f8y_A 67 ATYNNDLNGIKTNDIMLGVYIPDEEDVGLGMELGYALSQ------GKYVLLVIPD 115 (157)
T ss_dssp HHHHHHHHHHHTSSEEEEECCGGGCCHHHHHHHHHHHHT------TCEEEEEECG
T ss_pred HHHHHhHHHHHhCCEEEEEcCCCCCCccHHHHHHHHHHC------CCeEEEEEcC
Confidence 3478888999999999998765 8999999999987 8999998754
No 18
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=92.60 E-value=0.15 Score=38.65 Aligned_cols=87 Identities=16% Similarity=0.135 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHhCCeEEEc-cCC---CcCHHHHHHHHHHHHcCCCCccEEEEecCccch---HHHHHHHHH---HHcCCC
Q 031213 41 DMHQRKAEMARNSDCFIAL-PGG---YGTLEELLEVITWAQLGIHDKPVGLINVDGYYN---SLLNFIDKA---VDDGFI 110 (164)
Q Consensus 41 ~m~~Rk~~m~~~sDafIvl-PGG---~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~---~l~~~l~~~---~~egfi 110 (164)
..+.+....++.||++|++ .|. .||.-|+-.++.+ .|||+++..+ +.+ .-.+-+..| .+..|.
T Consensus 58 ~i~~~D~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~------gkPVi~~~~D-~R~~g~~~~~~~~~~~~~~e~~f~ 130 (162)
T 3ehd_A 58 MIALADTENVLASDLLVALLDGPTIDAGVASEIGVAYAK------GIPVVALYTD-SRQQGADNHQKLDALNEIAENQFH 130 (162)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSSCCHHHHHHHHHHHHT------TCCEEEECCC-GGGCCTTCHHHHHHTTSTTCCCSC
T ss_pred HHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHC------CCEEEEEEcC-cccccCCcchhhhhhHHHhhhhhh
Confidence 4688888999999998886 554 8999999999876 8999998764 221 001111111 111110
Q ss_pred C-c-----cccCCeEEcCCHHHHHHHHHhh
Q 031213 111 S-P-----SQRSILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 111 ~-~-----~~~~~i~~~~~~ee~~~~l~~~ 134 (164)
. . --...=.+++|.+|+++.|+++
T Consensus 131 ~~N~~~~G~i~~~g~~~~~~~~~~~~l~~~ 160 (162)
T 3ehd_A 131 YLNLYTVGLIKLNGRVVSSEEDLLEEIKQR 160 (162)
T ss_dssp CCCHHHHHHHHTTEEEESSHHHHHHHHHHT
T ss_pred hhhHHHhhhHHhCCeEEeCHHHHHHHHHHH
Confidence 0 0 0011236779999999999876
No 19
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=91.44 E-value=0.22 Score=37.50 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHhCCeEEEccC--CCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 40 ADMHQRKAEMARNSDCFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 40 ~~m~~Rk~~m~~~sDafIvlPG--G~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
...++|...+++.||++|+..- ..||.-|+-.+..+ .|||+++..
T Consensus 56 ~~i~~~d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~al------gkPV~~l~~ 102 (152)
T 4fyk_A 56 QFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVAL------GKPILCLFR 102 (152)
T ss_dssp HHHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred HHHHHHHHHHHHHCCEEEEeCCCCCCCHHHHHHHHHHc------CCeEEEEEe
Confidence 3468999999999999999743 68999999999876 899998654
No 20
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=89.26 E-value=1.9 Score=32.84 Aligned_cols=86 Identities=13% Similarity=0.035 Sum_probs=52.5
Q ss_pred HHHHHHHh-----cCCEEEEEeCCCccccccc--C--------CccceEeec---C-----CHHHHHHHHHHhCCeEEEc
Q 031213 3 LVSHVVHR-----GGGHVLGIIPKTLMNKEIT--G--------ETVGEVKPV---A-----DMHQRKAEMARNSDCFIAL 59 (164)
Q Consensus 3 ava~ga~~-----~GG~viGIiP~~~~~~e~~--~--------~~~~el~i~---~-----~m~~Rk~~m~~~sDafIvl 59 (164)
.+|+.|++ .+.+.+-|+|....+.... + ...+....+ + .+..|++.|+++||..|++
T Consensus 58 ~aae~vl~lk~~y~~i~L~~v~Pf~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~~y~~~~~~~~rn~~mvd~sD~liav 137 (181)
T 2nx2_A 58 WAAEAAYDLQEEYPDLKVAVITPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQKNQFFIDKSDGLLLL 137 (181)
T ss_dssp HHHHHHHTTTTTCTTCEEEEEESSBCTTTTSCHHHHHHHHHHHHHCSEEEESSSSBCCCHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHHHHHHhccccCCceEEEEecccchhhCCCHHHHHHHHHHHHhCCeEEecccCCCCCHHHHHHHHHHHHHHCCEEEEE
Confidence 35677777 4689999999665432110 0 011122211 1 2679999999999999998
Q ss_pred c-CCC--cCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 60 P-GGY--GTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 60 P-GG~--GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
- |.. ||-.=+-.+-...+ .+++|+.+++.
T Consensus 138 yDg~~~GgT~~~v~~A~~~~~--~~~~pv~~I~~ 169 (181)
T 2nx2_A 138 YDPEKEGSPKYMLGTAEKRRE--QDGYPIYFITM 169 (181)
T ss_dssp CCTTTCCTTHHHHHHHHHHHH--HHCCCEEEECH
T ss_pred EcCCCCCCHHHHHHHHHHhcc--ccCCeEEEEcH
Confidence 8 433 67554444443322 33799999874
No 21
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=88.95 E-value=0.5 Score=35.82 Aligned_cols=43 Identities=21% Similarity=0.129 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHhCCeEEEc----cCCCcCHHHHHHHHHHHHcCCCCccEEEEe
Q 031213 41 DMHQRKAEMARNSDCFIAL----PGGYGTLEELLEVITWAQLGIHDKPVGLIN 89 (164)
Q Consensus 41 ~m~~Rk~~m~~~sDafIvl----PGG~GTLdEl~e~~t~~qlg~~~kPivlln 89 (164)
..+++....++.||++|++ .=-.||.-|+-.++.+ .|||+++.
T Consensus 70 ~I~~~D~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~al------gKPVv~l~ 116 (167)
T 1s2d_A 70 ATYQNDLTGISNATCGVFLYDMDQLDDGSAFXIGFMRAM------HKPVILVP 116 (167)
T ss_dssp HHHHHHHHHHHHCSEEEEEEESSSCCHHHHHHHHHHHHT------TCCEEEEE
T ss_pred HHHHHHHHHHHhCCEEEEECCCCCCCCCceeehhhHhhC------CCeEEEEE
Confidence 3478888899999999996 3468999999999886 89999995
No 22
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=88.65 E-value=1.4 Score=31.61 Aligned_cols=64 Identities=19% Similarity=0.288 Sum_probs=38.9
Q ss_pred HhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcC----CHHH
Q 031213 51 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP----NAKE 126 (164)
Q Consensus 51 ~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~----~~ee 126 (164)
..+|+||. .||.||+-|.... .+|++++.. +.+. ....+.+.+.|. -..++ ++++
T Consensus 85 ~~ad~~I~-~~G~~t~~Ea~~~---------G~P~i~~p~--~~~Q-~~na~~l~~~g~--------g~~~~~~~~~~~~ 143 (170)
T 2o6l_A 85 PKTRAFIT-HGGANGIYEAIYH---------GIPMVGIPL--FADQ-PDNIAHMKARGA--------AVRVDFNTMSSTD 143 (170)
T ss_dssp TTEEEEEE-CCCHHHHHHHHHH---------TCCEEECCC--STTH-HHHHHHHHTTTS--------EEECCTTTCCHHH
T ss_pred CCcCEEEE-cCCccHHHHHHHc---------CCCEEeccc--hhhH-HHHHHHHHHcCC--------eEEeccccCCHHH
Confidence 67887775 7888998887633 899999864 2222 222233444332 12222 7888
Q ss_pred HHHHHHhhc
Q 031213 127 LVQKLEEYV 135 (164)
Q Consensus 127 ~~~~l~~~~ 135 (164)
+.+.|.+..
T Consensus 144 l~~~i~~ll 152 (170)
T 2o6l_A 144 LLNALKRVI 152 (170)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877654
No 23
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=84.45 E-value=1.9 Score=36.84 Aligned_cols=82 Identities=13% Similarity=0.080 Sum_probs=48.3
Q ss_pred hCCeEEE-ccCCCcCHHHHHHHHHHHHcC-CCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHHHH
Q 031213 52 NSDCFIA-LPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQ 129 (164)
Q Consensus 52 ~sDafIv-lPGG~GTLdEl~e~~t~~qlg-~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~~~ 129 (164)
..|++++ ++||+-..+++.+.+.-..-. .++||++..-. |- ...+-.+.+.+.| +...++++++.+
T Consensus 301 ~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~-G~--~~~~~~~~l~~~g---------ip~~~~~e~Aa~ 368 (397)
T 3ufx_B 301 DVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA-GT--AEEEAKKLLEGKP---------VYMYPTSIEAAK 368 (397)
T ss_dssp TCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEE-EE--CHHHHHHHTTTSS---------EEECSSHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEcc-CC--CHHHHHHHHHhCC---------CcccCCHHHHHH
Confidence 3577665 889999899999887643322 24899886433 32 1222222232222 889999999999
Q ss_pred HHHhhcCCCCCccccceeccccc
Q 031213 130 KLEEYVPLHDGVVAKVKWEAEQV 152 (164)
Q Consensus 130 ~l~~~~~~~~~~~~~~~w~~~~~ 152 (164)
.+.+.. .+..|.+..+
T Consensus 369 ~~~~l~-------~~a~w~~~~~ 384 (397)
T 3ufx_B 369 VTVAMK-------GGAAWLEFAP 384 (397)
T ss_dssp HHHHSC-------CSCC------
T ss_pred HHHHHH-------HHhHHhhCCC
Confidence 997753 2346876443
No 24
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=84.09 E-value=10 Score=30.52 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=25.6
Q ss_pred HHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 46 KAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 46 k~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
...++..||+|| .+||.+|+-|.+ .. .+|+|++..
T Consensus 302 ~~~~l~~ad~~v-~~~g~~t~~Ea~---a~------G~P~v~~p~ 336 (412)
T 3otg_A 302 QAALLPHVDLVV-HHGGSGTTLGAL---GA------GVPQLSFPW 336 (412)
T ss_dssp HHHHGGGCSEEE-ESCCHHHHHHHH---HH------TCCEEECCC
T ss_pred HHHHHhcCcEEE-ECCchHHHHHHH---Hh------CCCEEecCC
Confidence 345678899776 788888876654 33 899999754
No 25
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=81.78 E-value=6.2 Score=31.76 Aligned_cols=67 Identities=15% Similarity=0.050 Sum_probs=39.4
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc---CCHH
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA---PNAK 125 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~---~~~e 125 (164)
++..+|+||. .||.||+.|.+. +.+|++++.. +.+. ....+.+.+.|. .+.+. .+++
T Consensus 276 ~l~~~d~~v~-~~G~~t~~Ea~~---------~G~P~v~~p~--~~dq-~~~a~~~~~~g~-------g~~~~~~~~~~~ 335 (384)
T 2p6p_A 276 VAPTCDLLVH-HAGGVSTLTGLS---------AGVPQLLIPK--GSVL-EAPARRVADYGA-------AIALLPGEDSTE 335 (384)
T ss_dssp HGGGCSEEEE-CSCTTHHHHHHH---------TTCCEEECCC--SHHH-HHHHHHHHHHTS-------EEECCTTCCCHH
T ss_pred HHhhCCEEEe-CCcHHHHHHHHH---------hCCCEEEccC--cccc-hHHHHHHHHCCC-------eEecCcCCCCHH
Confidence 4588998876 788899766652 3899999864 2222 122233444332 11111 1678
Q ss_pred HHHHHHHhhc
Q 031213 126 ELVQKLEEYV 135 (164)
Q Consensus 126 e~~~~l~~~~ 135 (164)
++.+.+.+..
T Consensus 336 ~l~~~i~~ll 345 (384)
T 2p6p_A 336 AIADSCQELQ 345 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877776653
No 26
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=80.74 E-value=18 Score=29.45 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=40.6
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc---CCH
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA---PNA 124 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~---~~~ 124 (164)
.++..+|+||. .||.||+-|... +.+|++++.. +.+-....+.+.+.|.- +.+. -++
T Consensus 317 ~~l~~~d~~v~-~~G~~t~~Ea~~---------~G~P~i~~p~---~~dQ~~na~~l~~~g~g-------~~~~~~~~~~ 376 (424)
T 2iya_A 317 DILTKASAFIT-HAGMGSTMEALS---------NAVPMVAVPQ---IAEQTMNAERIVELGLG-------RHIPRDQVTA 376 (424)
T ss_dssp HHHTTCSEEEE-CCCHHHHHHHHH---------TTCCEEECCC---SHHHHHHHHHHHHTTSE-------EECCGGGCCH
T ss_pred HHHhhCCEEEE-CCchhHHHHHHH---------cCCCEEEecC---ccchHHHHHHHHHCCCE-------EEcCcCCCCH
Confidence 36778997665 788899777663 3899999853 22212222345444421 1111 277
Q ss_pred HHHHHHHHhhc
Q 031213 125 KELVQKLEEYV 135 (164)
Q Consensus 125 ee~~~~l~~~~ 135 (164)
+++.+.|++..
T Consensus 377 ~~l~~~i~~ll 387 (424)
T 2iya_A 377 EKLREAVLAVA 387 (424)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887777654
No 27
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=80.39 E-value=4.6 Score=33.56 Aligned_cols=78 Identities=12% Similarity=0.137 Sum_probs=44.5
Q ss_pred EeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCcccc
Q 031213 36 VKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQR 115 (164)
Q Consensus 36 l~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~ 115 (164)
+.+...... . .++..+|+||. .||.||+.|... +.+|++++.. +.+. ....+.+.+.|.-
T Consensus 321 v~~~~~~~~-~-~ll~~ad~~V~-~~G~~t~~Ea~~---------~G~P~i~~p~--~~dQ-~~na~~l~~~g~g----- 380 (441)
T 2yjn_A 321 VRTVGFVPM-H-ALLPTCAATVH-HGGPGSWHTAAI---------HGVPQVILPD--GWDT-GVRAQRTQEFGAG----- 380 (441)
T ss_dssp EEECCSCCH-H-HHGGGCSEEEE-CCCHHHHHHHHH---------TTCCEEECCC--SHHH-HHHHHHHHHHTSE-----
T ss_pred EEEecCCCH-H-HHHhhCCEEEE-CCCHHHHHHHHH---------hCCCEEEeCC--cccH-HHHHHHHHHcCCE-----
Confidence 344443333 2 34689998876 788899777663 3899999864 2222 1222344444421
Q ss_pred CCeEEc---CCHHHHHHHHHhhc
Q 031213 116 SILVSA---PNAKELVQKLEEYV 135 (164)
Q Consensus 116 ~~i~~~---~~~ee~~~~l~~~~ 135 (164)
+.+. -+++++.+.|++..
T Consensus 381 --~~~~~~~~~~~~l~~~i~~ll 401 (441)
T 2yjn_A 381 --IALPVPELTPDQLRESVKRVL 401 (441)
T ss_dssp --EECCTTTCCHHHHHHHHHHHH
T ss_pred --EEcccccCCHHHHHHHHHHHh
Confidence 1111 16777777776653
No 28
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=78.49 E-value=14 Score=30.34 Aligned_cols=77 Identities=14% Similarity=0.184 Sum_probs=44.8
Q ss_pred EeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCcccc
Q 031213 36 VKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQR 115 (164)
Q Consensus 36 l~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~ 115 (164)
+.+...... ..+ +..+|+||. .||.||+.|.... .+|++++.. +.+.. ...+.+.+.|.-
T Consensus 287 v~~~~~~~~-~~~-l~~~d~~v~-~~G~~t~~Ea~~~---------G~P~i~~p~--~~dQ~-~na~~l~~~g~g----- 346 (415)
T 1iir_A 287 CFAIGEVNH-QVL-FGRVAAVIH-HGGAGTTHVAARA---------GAPQILLPQ--MADQP-YYAGRVAELGVG----- 346 (415)
T ss_dssp EEECSSCCH-HHH-GGGSSEEEE-CCCHHHHHHHHHH---------TCCEEECCC--STTHH-HHHHHHHHHTSE-----
T ss_pred EEEeCcCCh-HHH-HhhCCEEEe-CCChhHHHHHHHc---------CCCEEECCC--CCccH-HHHHHHHHCCCc-----
Confidence 344443333 333 599998886 7888998777643 899999864 22322 222334444421
Q ss_pred CCeEEc---CCHHHHHHHHHhh
Q 031213 116 SILVSA---PNAKELVQKLEEY 134 (164)
Q Consensus 116 ~~i~~~---~~~ee~~~~l~~~ 134 (164)
+.+. -+++++.+.|++.
T Consensus 347 --~~~~~~~~~~~~l~~~i~~l 366 (415)
T 1iir_A 347 --VAHDGPIPTFDSLSAALATA 366 (415)
T ss_dssp --EECSSSSCCHHHHHHHHHHH
T ss_pred --ccCCcCCCCHHHHHHHHHHH
Confidence 1111 2678888877776
No 29
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=77.69 E-value=4.1 Score=33.13 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=25.1
Q ss_pred HHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEe
Q 031213 47 AEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLIN 89 (164)
Q Consensus 47 ~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln 89 (164)
..++..||+|| ..||.||+.|.+ . +.+|++++.
T Consensus 295 ~~ll~~ad~~v-~~gG~~t~~Ea~---~------~G~P~v~~p 327 (398)
T 4fzr_A 295 SAIMPACDVVV-HHGGHGTTLTCL---S------EGVPQVSVP 327 (398)
T ss_dssp HHHGGGCSEEE-ECCCHHHHHHHH---H------TTCCEEECC
T ss_pred HHHHhhCCEEE-ecCCHHHHHHHH---H------hCCCEEecC
Confidence 45677899887 688899976655 3 389999984
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=75.94 E-value=5.1 Score=32.07 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=41.5
Q ss_pred HHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCH
Q 031213 45 RKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNA 124 (164)
Q Consensus 45 Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ 124 (164)
....++..||+|| +|. |++ +.|++.. .+|+|.....+-...+ ++.| ..+.+-.|+
T Consensus 267 ~~~~~~~~ad~~v-~~S--~g~--~lEA~a~------G~PvI~~~~~~~~~~~-------~~~g-------~g~lv~~d~ 321 (376)
T 1v4v_A 267 SMAALMRASLLLV-TDS--GGL--QEEGAAL------GVPVVVLRNVTERPEG-------LKAG-------ILKLAGTDP 321 (376)
T ss_dssp HHHHHHHTEEEEE-ESC--HHH--HHHHHHT------TCCEEECSSSCSCHHH-------HHHT-------SEEECCSCH
T ss_pred HHHHHHHhCcEEE-ECC--cCH--HHHHHHc------CCCEEeccCCCcchhh-------hcCC-------ceEECCCCH
Confidence 5567788999885 565 566 7788875 8999987432333332 2222 112222688
Q ss_pred HHHHHHHHhhcC
Q 031213 125 KELVQKLEEYVP 136 (164)
Q Consensus 125 ee~~~~l~~~~~ 136 (164)
+++.+.|.+...
T Consensus 322 ~~la~~i~~ll~ 333 (376)
T 1v4v_A 322 EGVYRVVKGLLE 333 (376)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 888888877643
No 31
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=75.71 E-value=15 Score=29.37 Aligned_cols=69 Identities=12% Similarity=0.151 Sum_probs=39.1
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc-C--CH
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA-P--NA 124 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~-~--~~ 124 (164)
.++..||+|| ..||.||+.|.+ . +.+|++++-.. ..+. ...-+.+.+.|.- +.+. + |+
T Consensus 293 ~ll~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~~-~~~q-~~~a~~~~~~g~g-------~~~~~~~~~~ 353 (402)
T 3ia7_A 293 SVLAHARACL-THGTTGAVLEAF---A------AGVPLVLVPHF-ATEA-APSAERVIELGLG-------SVLRPDQLEP 353 (402)
T ss_dssp HHHTTEEEEE-ECCCHHHHHHHH---H------TTCCEEECGGG-CGGG-HHHHHHHHHTTSE-------EECCGGGCSH
T ss_pred HHHhhCCEEE-ECCCHHHHHHHH---H------hCCCEEEeCCC-cccH-HHHHHHHHHcCCE-------EEccCCCCCH
Confidence 5677899754 678889976654 2 38999987431 1221 1112334444421 1111 1 77
Q ss_pred HHHHHHHHhhc
Q 031213 125 KELVQKLEEYV 135 (164)
Q Consensus 125 ee~~~~l~~~~ 135 (164)
+++.+.+.+..
T Consensus 354 ~~l~~~~~~ll 364 (402)
T 3ia7_A 354 ASIREAVERLA 364 (402)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88877776653
No 32
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=74.62 E-value=1.5 Score=35.64 Aligned_cols=53 Identities=11% Similarity=0.136 Sum_probs=34.3
Q ss_pred cCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCC
Q 031213 39 VADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGF 109 (164)
Q Consensus 39 ~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egf 109 (164)
+++|. .++..||.+|. +|| +|+.|+... .+|.+++-... -+. ...+.+.+.|.
T Consensus 216 ~~~m~----~~m~~aDlvI~-~gG-~T~~E~~~~---------g~P~i~ip~~~-~Q~--~nA~~l~~~G~ 268 (282)
T 3hbm_A 216 HENIA----KLMNESNKLII-SAS-SLVNEALLL---------KANFKAICYVK-NQE--STATWLAKKGY 268 (282)
T ss_dssp CSCHH----HHHHTEEEEEE-ESS-HHHHHHHHT---------TCCEEEECCSG-GGH--HHHHHHHHTTC
T ss_pred HHHHH----HHHHHCCEEEE-CCc-HHHHHHHHc---------CCCEEEEeCCC-CHH--HHHHHHHHCCC
Confidence 45554 46788998888 788 798887733 89999985431 111 22345666664
No 33
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=74.57 E-value=3.4 Score=32.49 Aligned_cols=55 Identities=27% Similarity=0.399 Sum_probs=35.2
Q ss_pred HHHHHH-hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCc-cchHHHHHHHHHHHcCCC
Q 031213 46 KAEMAR-NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDG-YYNSLLNFIDKAVDDGFI 110 (164)
Q Consensus 46 k~~m~~-~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~g-fw~~l~~~l~~~~~egfi 110 (164)
...++. .||++|. =||.||+.|+... .+|.|++-... ..++=....+.+.+.|..
T Consensus 125 m~~~l~~~AdlvIs-haGagTv~Eal~~---------G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~ 181 (224)
T 2jzc_A 125 MQSIIRDYSDLVIS-HAGTGSILDSLRL---------NKPLIVCVNDSLMDNHQQQIADKFVELGYV 181 (224)
T ss_dssp HHHHHHHHCSCEEE-SSCHHHHHHHHHT---------TCCCCEECCSSCCCCHHHHHHHHHHHHSCC
T ss_pred HHHHHHhcCCEEEE-CCcHHHHHHHHHh---------CCCEEEEcCcccccchHHHHHHHHHHCCCE
Confidence 334567 8996665 5899998888743 89999985321 223333334567777753
No 34
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=74.32 E-value=16 Score=29.54 Aligned_cols=69 Identities=16% Similarity=0.270 Sum_probs=39.7
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc---CCH
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA---PNA 124 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~---~~~ 124 (164)
.++..||+|| ..||.||+.|.+ . +.+|++++-. ..+.. ..-+.+.+.|.- +.+. -++
T Consensus 309 ~ll~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~--~~~q~-~~a~~l~~~g~g-------~~~~~~~~~~ 368 (415)
T 3rsc_A 309 KVLEQATVCV-THGGMGTLMEAL---Y------WGRPLVVVPQ--SFDVQ-PMARRVDQLGLG-------AVLPGEKADG 368 (415)
T ss_dssp HHHHHEEEEE-ESCCHHHHHHHH---H------TTCCEEECCC--SGGGH-HHHHHHHHHTCE-------EECCGGGCCH
T ss_pred HHHhhCCEEE-ECCcHHHHHHHH---H------hCCCEEEeCC--cchHH-HHHHHHHHcCCE-------EEcccCCCCH
Confidence 5677799755 678889977765 2 3899998742 22221 112334444421 1111 178
Q ss_pred HHHHHHHHhhcC
Q 031213 125 KELVQKLEEYVP 136 (164)
Q Consensus 125 ee~~~~l~~~~~ 136 (164)
+++.+.+.+...
T Consensus 369 ~~l~~~i~~ll~ 380 (415)
T 3rsc_A 369 DTLLAAVGAVAA 380 (415)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 888888776543
No 35
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=73.51 E-value=11 Score=30.83 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=23.9
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
.++..||+|| ..||.+|+-|.+ . +.+|+|+...
T Consensus 295 ~~l~~ad~~v-~~~G~~t~~Ea~---~------~G~P~i~~p~ 327 (430)
T 2iyf_A 295 AILRQADLFV-THAGAGGSQEGL---A------TATPMIAVPQ 327 (430)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC
T ss_pred HHhhccCEEE-ECCCccHHHHHH---H------hCCCEEECCC
Confidence 4678899765 578888866655 3 3899998854
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=73.23 E-value=14 Score=29.24 Aligned_cols=66 Identities=12% Similarity=0.159 Sum_probs=41.3
Q ss_pred HHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCH
Q 031213 45 RKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNA 124 (164)
Q Consensus 45 Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ 124 (164)
....++..||+|| +|. |+. +.|++.. .+|+|..+..|....+ ++.| ..+.+..|+
T Consensus 275 ~~~~~~~~ad~~v-~~s--g~~--~lEA~a~------G~Pvi~~~~~~~~~e~-------v~~g-------~g~~v~~d~ 329 (375)
T 3beo_A 275 DFHNVAARSYLML-TDS--GGV--QEEAPSL------GVPVLVLRDTTERPEG-------IEAG-------TLKLAGTDE 329 (375)
T ss_dssp HHHHHHHTCSEEE-ECC--HHH--HHHHHHH------TCCEEECSSCCSCHHH-------HHTT-------SEEECCSCH
T ss_pred HHHHHHHhCcEEE-ECC--CCh--HHHHHhc------CCCEEEecCCCCCcee-------ecCC-------ceEEcCCCH
Confidence 5667788999886 564 444 7788876 8999988532333332 2222 223333588
Q ss_pred HHHHHHHHhhc
Q 031213 125 KELVQKLEEYV 135 (164)
Q Consensus 125 ee~~~~l~~~~ 135 (164)
+++.+.|.+..
T Consensus 330 ~~la~~i~~ll 340 (375)
T 3beo_A 330 ETIFSLADELL 340 (375)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888776643
No 37
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=72.31 E-value=10 Score=27.13 Aligned_cols=71 Identities=14% Similarity=0.281 Sum_probs=46.1
Q ss_pred HHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc
Q 031213 44 QRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 121 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~ 121 (164)
+....++..||++|..+ .|+|. =++|++.. .+|+|..+.. .+.+ ++ .......++ .
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~--~~~Eama~------G~PvI~~~~~----~~~e----~i-----~~~~~g~~~-~ 146 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGL--TPIEAMAS------GKPVIAVNEG----GFKE----TV-----INEKTGYLV-N 146 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCH--HHHHHHHT------TCCEEEESSH----HHHH----HC-----CBTTTEEEE-C
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCh--HHHHHHHc------CCcEEEeCCC----CHHH----Hh-----cCCCccEEe-C
Confidence 44677889999988744 46664 35777764 8999987642 2222 22 122223344 8
Q ss_pred CCHHHHHHHHHhhcC
Q 031213 122 PNAKELVQKLEEYVP 136 (164)
Q Consensus 122 ~~~ee~~~~l~~~~~ 136 (164)
+|++++.+.|.+...
T Consensus 147 ~d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 147 ADVNEIIDAMKKVSK 161 (177)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999988753
No 38
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=71.87 E-value=10 Score=31.09 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=41.1
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEE---cCCHH
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS---APNAK 125 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~---~~~~e 125 (164)
++..+|+||. -||.||+.|.... .+|++++.. +.+.. ...+.+.+.|.- +.+ .-+++
T Consensus 299 ll~~~d~~v~-~~G~~t~~Ea~~~---------G~P~i~~p~--~~dQ~-~na~~l~~~g~g-------~~~~~~~~~~~ 358 (416)
T 1rrv_A 299 LFRRVAAVIH-HGSAGTEHVATRA---------GVPQLVIPR--NTDQP-YFAGRVAALGIG-------VAHDGPTPTFE 358 (416)
T ss_dssp HGGGSSEEEE-CCCHHHHHHHHHH---------TCCEEECCC--SBTHH-HHHHHHHHHTSE-------EECSSSCCCHH
T ss_pred HhccCCEEEe-cCChhHHHHHHHc---------CCCEEEccC--CCCcH-HHHHHHHHCCCc-------cCCCCCCCCHH
Confidence 4599998887 7888998887743 899999854 23332 222344444421 111 12677
Q ss_pred HHHHHHHhh
Q 031213 126 ELVQKLEEY 134 (164)
Q Consensus 126 e~~~~l~~~ 134 (164)
++.+.|++.
T Consensus 359 ~l~~~i~~l 367 (416)
T 1rrv_A 359 SLSAALTTV 367 (416)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 887777776
No 39
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=70.94 E-value=37 Score=27.69 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=39.3
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCCHHHH
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKEL 127 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~~ee~ 127 (164)
.++..+|+|| -.||.||+.|.... .+|++++-. +.+. ..+.+.+.+.|.-..-..+ .-+++++
T Consensus 280 ~ll~~~d~~v-~~gG~~t~~Eal~~---------GvP~v~~p~--~~dQ-~~na~~~~~~G~g~~l~~~----~~~~~~l 342 (404)
T 3h4t_A 280 VLFGRVAAVV-HHGGAGTTTAVTRA---------GAPQVVVPQ--KADQ-PYYAGRVADLGVGVAHDGP----TPTVESL 342 (404)
T ss_dssp HHGGGSSEEE-ECCCHHHHHHHHHH---------TCCEEECCC--STTH-HHHHHHHHHHTSEEECSSS----SCCHHHH
T ss_pred HHHhhCcEEE-ECCcHHHHHHHHHc---------CCCEEEcCC--cccH-HHHHHHHHHCCCEeccCcC----CCCHHHH
Confidence 3557888765 67778998776633 899999842 2222 1222445555431000000 1167777
Q ss_pred HHHHHhhc
Q 031213 128 VQKLEEYV 135 (164)
Q Consensus 128 ~~~l~~~~ 135 (164)
.+.+.+..
T Consensus 343 ~~ai~~ll 350 (404)
T 3h4t_A 343 SAALATAL 350 (404)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77776654
No 40
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=70.52 E-value=7.6 Score=31.25 Aligned_cols=68 Identities=13% Similarity=0.272 Sum_probs=40.8
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc-----CC
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA-----PN 123 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~-----~~ 123 (164)
++..||+|| ..||.||+.|.+ . +.+|++++.. +.+.. ...+.+.+.|. .+.+. .|
T Consensus 283 ll~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~--~~~q~-~~a~~~~~~g~-------g~~~~~~~~~~~ 342 (391)
T 3tsa_A 283 FLRTCELVI-CAGGSGTAFTAT---R------LGIPQLVLPQ--YFDQF-DYARNLAAAGA-------GICLPDEQAQSD 342 (391)
T ss_dssp TGGGCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC--STTHH-HHHHHHHHTTS-------EEECCSHHHHTC
T ss_pred HHhhCCEEE-eCCCHHHHHHHH---H------hCCCEEecCC--cccHH-HHHHHHHHcCC-------EEecCcccccCC
Confidence 348999877 578889976665 2 3899999843 22221 22234444442 12222 36
Q ss_pred HHHHHHHHHhhcC
Q 031213 124 AKELVQKLEEYVP 136 (164)
Q Consensus 124 ~ee~~~~l~~~~~ 136 (164)
++++.+.+.+...
T Consensus 343 ~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 343 HEQFTDSIATVLG 355 (391)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8888888877654
No 41
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=68.64 E-value=26 Score=27.40 Aligned_cols=70 Identities=24% Similarity=0.243 Sum_probs=44.1
Q ss_pred HHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEE-
Q 031213 44 QRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS- 120 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~- 120 (164)
+....++..||++|.-. .|+|+ =++|++.. .+|+|..+..|.-+-+.+ - ...+.+
T Consensus 262 ~~~~~~~~~ad~~v~ps~~e~~~~--~~~Ea~a~------G~Pvi~~~~~~~~e~i~~----~----------~~g~~~~ 319 (374)
T 2iw1_A 262 NDVSELMAAADLLLHPAYQEAAGI--VLLEAITA------GLPVLTTAVCGYAHYIAD----A----------NCGTVIA 319 (374)
T ss_dssp SCHHHHHHHCSEEEECCSCCSSCH--HHHHHHHH------TCCEEEETTSTTTHHHHH----H----------TCEEEEC
T ss_pred ccHHHHHHhcCEEEeccccCCccc--HHHHHHHC------CCCEEEecCCCchhhhcc----C----------CceEEeC
Confidence 33456788899877643 45565 47777776 899999887554332211 0 122333
Q ss_pred -cCCHHHHHHHHHhhc
Q 031213 121 -APNAKELVQKLEEYV 135 (164)
Q Consensus 121 -~~~~ee~~~~l~~~~ 135 (164)
..|++++.+.|.+..
T Consensus 320 ~~~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 320 EPFSQEQLNEVLRKAL 335 (374)
T ss_dssp SSCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 348999988887764
No 42
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=67.82 E-value=11 Score=31.35 Aligned_cols=76 Identities=13% Similarity=0.158 Sum_probs=44.5
Q ss_pred eEeecCCH-HHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCcc
Q 031213 35 EVKPVADM-HQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPS 113 (164)
Q Consensus 35 el~i~~~m-~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~ 113 (164)
.+.+++.+ +.....++..||+||. +-| |+. .|++.+ .+|+|+.+..+-|..+ ++.|.
T Consensus 289 ~v~~~~~lg~~~~~~l~~~ad~vv~-~SG-g~~---~EA~a~------G~PvV~~~~~~~~~e~-------v~~G~---- 346 (396)
T 3dzc_A 289 NIVLIEPQQYLPFVYLMDRAHIILT-DSG-GIQ---EEAPSL------GKPVLVMRETTERPEA-------VAAGT---- 346 (396)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEE-SCS-GGG---TTGGGG------TCCEEECCSSCSCHHH-------HHHTS----
T ss_pred CEEEeCCCCHHHHHHHHHhcCEEEE-CCc-cHH---HHHHHc------CCCEEEccCCCcchHH-------HHcCc----
Confidence 34444444 2456678899998754 444 544 444443 8999998444455432 33331
Q ss_pred ccCCeEEcCCHHHHHHHHHhhc
Q 031213 114 QRSILVSAPNAKELVQKLEEYV 135 (164)
Q Consensus 114 ~~~~i~~~~~~ee~~~~l~~~~ 135 (164)
.+.+-+|++++.+.+.+..
T Consensus 347 ---~~lv~~d~~~l~~ai~~ll 365 (396)
T 3dzc_A 347 ---VKLVGTNQQQICDALSLLL 365 (396)
T ss_dssp ---EEECTTCHHHHHHHHHHHH
T ss_pred ---eEEcCCCHHHHHHHHHHHH
Confidence 1333447888888887654
No 43
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=67.82 E-value=9.9 Score=30.83 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=24.1
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEe
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLIN 89 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln 89 (164)
.++..||+|| ..||.||+.|.+ .. .+|++++.
T Consensus 295 ~ll~~ad~~v-~~~G~~t~~Eal---~~------G~P~v~~p 326 (398)
T 3oti_A 295 TLLRTCTAVV-HHGGGGTVMTAI---DA------GIPQLLAP 326 (398)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---HH------TCCEEECC
T ss_pred HHHhhCCEEE-ECCCHHHHHHHH---Hh------CCCEEEcC
Confidence 4667799776 688999976655 33 89999974
No 44
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=66.42 E-value=14 Score=29.39 Aligned_cols=67 Identities=12% Similarity=0.162 Sum_probs=40.4
Q ss_pred HHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCC
Q 031213 44 QRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPN 123 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~ 123 (164)
+....++..||+||. |. |++ +.|++.. .+|+|..+..|-...+ ++.| ..+.+..|
T Consensus 274 ~~~~~~~~~ad~~v~-~S--g~~--~lEA~a~------G~PvI~~~~~~~~~e~-------v~~g-------~g~lv~~d 328 (384)
T 1vgv_A 274 LPFVWLMNHAWLILT-DS--GGI--QEEAPSL------GKPVLVMRDTTERPEA-------VTAG-------TVRLVGTD 328 (384)
T ss_dssp HHHHHHHHHCSEEEE-SS--STG--GGTGGGG------TCCEEEESSCCSCHHH-------HHHT-------SEEEECSS
T ss_pred HHHHHHHHhCcEEEE-CC--cch--HHHHHHc------CCCEEEccCCCCcchh-------hhCC-------ceEEeCCC
Confidence 556677889998765 44 333 5666654 8999998752333332 2222 12333348
Q ss_pred HHHHHHHHHhhc
Q 031213 124 AKELVQKLEEYV 135 (164)
Q Consensus 124 ~ee~~~~l~~~~ 135 (164)
++++.+.|.+..
T Consensus 329 ~~~la~~i~~ll 340 (384)
T 1vgv_A 329 KQRIVEEVTRLL 340 (384)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888776643
No 45
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=61.72 E-value=15 Score=28.86 Aligned_cols=74 Identities=12% Similarity=0.092 Sum_probs=40.3
Q ss_pred HHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEcCC-
Q 031213 45 RKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPN- 123 (164)
Q Consensus 45 Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~~~- 123 (164)
....++..||+||. |+|-+| +.|++.. .+|+|..+..|.-+.-....+.+.+.|. ..++-.+|
T Consensus 247 ~~~~~~~~ad~~v~-~sg~~~---~~EAma~------G~Pvi~~~~~g~~~~q~~~~~~~~~~g~------g~~~~~~d~ 310 (364)
T 1f0k_A 247 DMAAAYAWADVVVC-RSGALT---VSEIAAA------GLPALFVPFQHKDRQQYWNALPLEKAGA------AKIIEQPQL 310 (364)
T ss_dssp CHHHHHHHCSEEEE-CCCHHH---HHHHHHH------TCCEEECCCCCTTCHHHHHHHHHHHTTS------EEECCGGGC
T ss_pred hHHHHHHhCCEEEE-CCchHH---HHHHHHh------CCCEEEeeCCCCchhHHHHHHHHHhCCc------EEEeccccC
Confidence 34567888997765 555444 4455554 8999999876541111111223444331 11222334
Q ss_pred -HHHHHHHHHhh
Q 031213 124 -AKELVQKLEEY 134 (164)
Q Consensus 124 -~ee~~~~l~~~ 134 (164)
++++.+.|.+.
T Consensus 311 ~~~~la~~i~~l 322 (364)
T 1f0k_A 311 SVDAVANTLAGW 322 (364)
T ss_dssp CHHHHHHHHHTC
T ss_pred CHHHHHHHHHhc
Confidence 78888877665
No 46
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=61.34 E-value=48 Score=26.36 Aligned_cols=73 Identities=21% Similarity=0.171 Sum_probs=41.3
Q ss_pred HHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCC
Q 031213 3 LVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHD 82 (164)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~ 82 (164)
+++++..+.+-+++-.......... ...-....+...... ..++..+|+|| --||.||+.|.... .
T Consensus 259 ~~~~~l~~~~~~~v~~~~~~~~~~~--~~~~~~v~~~~~~p~--~~lL~~~~~~v-~h~G~~s~~Eal~~---------G 324 (400)
T 4amg_A 259 PLFSEVADVDAEFVLTLGGGDLALL--GELPANVRVVEWIPL--GALLETCDAII-HHGGSGTLLTALAA---------G 324 (400)
T ss_dssp HHHHHGGGSSSEEEEECCTTCCCCC--CCCCTTEEEECCCCH--HHHHTTCSEEE-ECCCHHHHHHHHHH---------T
T ss_pred HHHHHhhccCceEEEEecCcccccc--ccCCCCEEEEeecCH--HHHhhhhhhee-ccCCccHHHHHHHh---------C
Confidence 4556566667777766544432211 111112333333332 23557788765 68889998776533 8
Q ss_pred ccEEEEe
Q 031213 83 KPVGLIN 89 (164)
Q Consensus 83 kPivlln 89 (164)
+|++++-
T Consensus 325 vP~v~~P 331 (400)
T 4amg_A 325 VPQCVIP 331 (400)
T ss_dssp CCEEECC
T ss_pred CCEEEec
Confidence 9999874
No 47
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=60.98 E-value=45 Score=27.57 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=48.5
Q ss_pred eEeecCCH-HHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCcc
Q 031213 35 EVKPVADM-HQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPS 113 (164)
Q Consensus 35 el~i~~~m-~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~ 113 (164)
.+.+++.+ +.....++..||.+|.=.||+ . .|+..+ .+|++.++...-|... ++.|.
T Consensus 264 ~v~l~~~lg~~~~~~l~~~adlvvt~SGgv--~---~EA~al------G~Pvv~~~~~ter~e~-------v~~G~---- 321 (385)
T 4hwg_A 264 KIRFLPAFSFTDYVKLQMNAFCILSDSGTI--T---EEASIL------NLPALNIREAHERPEG-------MDAGT---- 321 (385)
T ss_dssp GEEECCCCCHHHHHHHHHHCSEEEECCTTH--H---HHHHHT------TCCEEECSSSCSCTHH-------HHHTC----
T ss_pred CEEEEcCCCHHHHHHHHHhCcEEEECCccH--H---HHHHHc------CCCEEEcCCCccchhh-------hhcCc----
Confidence 45555555 345678899999988666652 2 455554 8999998654324432 33332
Q ss_pred ccCCeEEcCCHHHHHHHHHhhcC
Q 031213 114 QRSILVSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 114 ~~~~i~~~~~~ee~~~~l~~~~~ 136 (164)
.+.+-.|++++.+.+.+...
T Consensus 322 ---~~lv~~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 322 ---LIMSGFKAERVLQAVKTITE 341 (385)
T ss_dssp ---CEECCSSHHHHHHHHHHHHT
T ss_pred ---eEEcCCCHHHHHHHHHHHHh
Confidence 12333589999998887654
No 48
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=60.46 E-value=8.1 Score=33.17 Aligned_cols=80 Identities=15% Similarity=0.229 Sum_probs=46.8
Q ss_pred CeEEEccCCCcCHHHHHHHHHHHHcC-CCCccEEEEecCccchHHHHH-HHHHHHcCCCCccccCCeEE-cCCHHHHHHH
Q 031213 54 DCFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYNSLLNF-IDKAVDDGFISPSQRSILVS-APNAKELVQK 130 (164)
Q Consensus 54 DafIvlPGG~GTLdEl~e~~t~~qlg-~~~kPivlln~~gfw~~l~~~-l~~~~~egfi~~~~~~~i~~-~~~~ee~~~~ 130 (164)
-++|+|.||-|| ++. ..+||++=+. | .|++++ |+.+...|+ .+.+++ -...+++.++
T Consensus 13 ~~vvILAaG~Gt-----------Rm~~~~pK~l~pv~--g--kp~i~~~l~~~~~~g~-----~~i~vv~~~~~~~i~~~ 72 (501)
T 3st8_A 13 TAVLVLAAGPGT-----------RMRSDTPKVLHTLA--G--RSMLSHVLHAIAKLAP-----QRLIVVLGHDHQRIAPL 72 (501)
T ss_dssp EEEEEEECSCCG-----------GGCCSSCGGGCEET--T--EEHHHHHHHHHHHHCC-----SEEEEEECTTHHHHHHH
T ss_pred ceEEEECCcCcc-----------cCCCCCCHHHeEEC--C--hhHHHHHHHHHHhCCC-----CEEEEEeCCCHHHHHHH
Confidence 368999999999 233 2478877554 3 467775 467776664 334444 4457778788
Q ss_pred HHhhcCCCCCccccceeccccccccc
Q 031213 131 LEEYVPLHDGVVAKVKWEAEQVELNT 156 (164)
Q Consensus 131 l~~~~~~~~~~~~~~~w~~~~~~~~~ 156 (164)
+.+.... ....+.|.....++||
T Consensus 73 ~~~~~~~---~~~~i~~~~q~~~lGT 95 (501)
T 3st8_A 73 VGELADT---LGRTIDVALQDRPLGT 95 (501)
T ss_dssp HHHHHHH---HTSCCEEEECSSCCCH
T ss_pred HHHHHHh---cCCcEEEEEcCCCCCc
Confidence 7653210 0123445544445555
No 49
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=58.09 E-value=23 Score=29.26 Aligned_cols=44 Identities=23% Similarity=0.326 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 44 QRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+|-....+..|+|||+= |.=||+|-..++++.- ..+|||||.+.
T Consensus 71 ~~I~~~~~~~dG~VItH-GTDTmeeTA~~Ls~~l--~~~kPVVlTGA 114 (326)
T 1nns_A 71 KKINTDCDKTDGFVITH-GTDTMEETAYFLDLTV--KCDKPVVMVGA 114 (326)
T ss_dssp HHHHHHGGGCSEEEEEC-CSSSHHHHHHHHHHHC--CCCSCEEEECC
T ss_pred HHHHHHhhcCCcEEEEc-CchhHHHHHHHHHHhc--CCCCCEEEeCC
Confidence 33333444559999985 5899999999998764 45899999764
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=56.94 E-value=30 Score=23.88 Aligned_cols=71 Identities=17% Similarity=0.165 Sum_probs=44.7
Q ss_pred HHHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCc-cEEEEecCccchHHHHHHHHHHHcCCCCccccCCeE
Q 031213 43 HQRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDK-PVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILV 119 (164)
Q Consensus 43 ~~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~k-Pivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~ 119 (164)
.+....++..||++|.-. .|+|. =++|++.. .+ |++..+..|....+ +.. ...++
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~--~~~Eama~------G~vPvi~~~~~~~~~~~------------~~~--~~~~~ 122 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAI--ACLEAISV------GIVPVIANSPLSATRQF------------ALD--ERSLF 122 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCH--HHHHHHHT------TCCEEEECCTTCGGGGG------------CSS--GGGEE
T ss_pred HHHHHHHHHhCCEEEECCcccCccH--HHHHHHhc------CCCcEEeeCCCCchhhh------------ccC--CceEE
Confidence 455667889999877533 35554 56777764 77 99984433333322 111 12366
Q ss_pred EcCCHHHHHHHHHhhc
Q 031213 120 SAPNAKELVQKLEEYV 135 (164)
Q Consensus 120 ~~~~~ee~~~~l~~~~ 135 (164)
..+|++++.+.|.+..
T Consensus 123 ~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 123 EPNNAKDLSAKIDWWL 138 (166)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHH
Confidence 7789999999887764
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=55.75 E-value=26 Score=24.94 Aligned_cols=71 Identities=21% Similarity=0.208 Sum_probs=43.5
Q ss_pred HHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc
Q 031213 44 QRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 121 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~ 121 (164)
+....++..||++|... .|+|+ =++|++.. .+|+|..+.. .+.++ + ......++-.
T Consensus 107 ~~~~~~~~~ad~~l~ps~~e~~~~--~~~Ea~a~------G~PvI~~~~~----~~~e~---------~-~~~~g~~~~~ 164 (200)
T 2bfw_A 107 EFVRELYGSVDFVIIPSYFEPFGL--VALEAMCL------GAIPIASAVG----GLRDI---------I-TNETGILVKA 164 (200)
T ss_dssp HHHHHHHTTCSEEEECCSCCSSCH--HHHHHHHT------TCEEEEESCH----HHHHH---------C-CTTTCEEECT
T ss_pred HHHHHHHHHCCEEEECCCCCCccH--HHHHHHHC------CCCEEEeCCC----ChHHH---------c-CCCceEEecC
Confidence 45567788899888643 24454 36777764 8999987653 22222 1 1122233444
Q ss_pred CCHHHHHHHHHhhcC
Q 031213 122 PNAKELVQKLEEYVP 136 (164)
Q Consensus 122 ~~~ee~~~~l~~~~~ 136 (164)
+|++++.+.|.+...
T Consensus 165 ~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 165 GDPGELANAILKALE 179 (200)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 599999998887643
No 52
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=54.92 E-value=32 Score=27.03 Aligned_cols=71 Identities=21% Similarity=0.271 Sum_probs=44.9
Q ss_pred HHHHHHHHhCCeEEEcc---------CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccc
Q 031213 44 QRKAEMARNSDCFIALP---------GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQ 114 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlP---------GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~ 114 (164)
+....++..||++|..- .|+|+ =++|++.. .+|+|..+..|. .. ++...
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~--~~~Ea~a~------G~PvI~~~~~~~-~e------------~i~~~- 321 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGI--VYLEAQAC------GVPVIAGTSGGA-PE------------TVTPA- 321 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCH--HHHHHHHT------TCCEEECSSTTG-GG------------GCCTT-
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCc--HHHHHHHc------CCCEEEeCCCCh-HH------------HHhcC-
Confidence 55566789999887743 56665 57777765 899999776432 22 12222
Q ss_pred cCCeEEcCCHHHHHHHHHhhcC
Q 031213 115 RSILVSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 115 ~~~i~~~~~~ee~~~~l~~~~~ 136 (164)
...++-.+|++++.+.|.+...
T Consensus 322 ~g~~~~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 322 TGLVVEGSDVDKLSELLIELLD 343 (394)
T ss_dssp TEEECCTTCHHHHHHHHHHHHT
T ss_pred CceEeCCCCHHHHHHHHHHHHh
Confidence 2222333589999999887654
No 53
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=53.10 E-value=64 Score=25.62 Aligned_cols=43 Identities=28% Similarity=0.301 Sum_probs=29.4
Q ss_pred HhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccc
Q 031213 51 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 94 (164)
Q Consensus 51 ~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw 94 (164)
+...+.|+|+|| .|...+++.+.-..-+..=+-+.+++.+.||
T Consensus 53 ~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 95 (268)
T 3ico_A 53 ARGQALIVLTGG-GNGIALLRYLSAQAQQIEWSKVHLFWGDERY 95 (268)
T ss_dssp HHSCEEEEECCS-HHHHHHHHHHHHHGGGSCGGGEEEEESEEEC
T ss_pred hcCceEEEEecC-CchhHHHHHHHHHhhhhhheeeEEeeccccc
Confidence 467899999999 4777777777643211222457788887788
No 54
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=51.80 E-value=4 Score=31.91 Aligned_cols=79 Identities=18% Similarity=0.268 Sum_probs=50.2
Q ss_pred CCeEEEccCCCcCHHHHHHHHHH--------HHcCCCCccEEEEecCccchHH-HHHHHHHHHcCCC-CccccCCeEEcC
Q 031213 53 SDCFIALPGGYGTLEELLEVITW--------AQLGIHDKPVGLINVDGYYNSL-LNFIDKAVDDGFI-SPSQRSILVSAP 122 (164)
Q Consensus 53 sDafIvlPGG~GTLdEl~e~~t~--------~qlg~~~kPivlln~~gfw~~l-~~~l~~~~~egfi-~~~~~~~i~~~~ 122 (164)
+|++|+.|-..+|+.-+..=++- ..+ ..++|++++-.+-+..+. ++.+..+.+.|.+ -+.....+.-..
T Consensus 95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~L-k~~~plvl~Paem~~~~~~~~Nm~~L~~~G~~iipp~~g~ya~p~ 173 (209)
T 3zqu_A 95 PNAMVICPCSTGTLSAVATGACNNLIERAADVAL-KERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQ 173 (209)
T ss_dssp CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHH-HHTCCEEEEECCSSCCHHHHHHHHHHHHHTCEECCSCCCCTTCCC
T ss_pred cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHH-hcCCcEEEEEcccccCHHHHHHHHHHHHCCCEEeCCCcccccCCC
Confidence 89999999999999877532110 111 137899998654333332 3445666676742 233444455667
Q ss_pred CHHHHHHHHH
Q 031213 123 NAKELVQKLE 132 (164)
Q Consensus 123 ~~ee~~~~l~ 132 (164)
++||+++++-
T Consensus 174 ~iediv~~vv 183 (209)
T 3zqu_A 174 SVEDLVDFVV 183 (209)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 8999999874
No 55
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=51.77 E-value=8.5 Score=31.46 Aligned_cols=71 Identities=21% Similarity=0.146 Sum_probs=39.0
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccc-hHHHHHHHHHHHcCCCCccccCCeEEc---CC
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY-NSLLNFIDKAVDDGFISPSQRSILVSA---PN 123 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw-~~l~~~l~~~~~egfi~~~~~~~i~~~---~~ 123 (164)
.++..||.+|. -+|.+|+.|++.. .+|+|++....-- ++=..-.+.+.+.|. .+.+. -|
T Consensus 248 ~~l~~aDlvI~-raG~~Tv~E~~a~---------G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~-------a~~l~~~~~~ 310 (365)
T 3s2u_A 248 AAYAWADLVIC-RAGALTVSELTAA---------GLPAFLVPLPHAIDDHQTRNAEFLVRSGA-------GRLLPQKSTG 310 (365)
T ss_dssp HHHHHCSEEEE-CCCHHHHHHHHHH---------TCCEEECC-----CCHHHHHHHHHHTTTS-------EEECCTTTCC
T ss_pred hhhccceEEEe-cCCcchHHHHHHh---------CCCeEEeccCCCCCcHHHHHHHHHHHCCC-------EEEeecCCCC
Confidence 46888997775 5668898877633 8999987532111 111111234555553 11211 15
Q ss_pred HHHHHHHHHhhc
Q 031213 124 AKELVQKLEEYV 135 (164)
Q Consensus 124 ~ee~~~~l~~~~ 135 (164)
++++.+.|.+..
T Consensus 311 ~~~L~~~i~~ll 322 (365)
T 3s2u_A 311 AAELAAQLSEVL 322 (365)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777776653
No 56
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=51.53 E-value=30 Score=28.71 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=44.8
Q ss_pred eEeecCCH-HHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCcc
Q 031213 35 EVKPVADM-HQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPS 113 (164)
Q Consensus 35 el~i~~~m-~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~ 113 (164)
.+.++..+ +.....++..||++|.=. |++. .|++.+ .+|+|+....+=|..+ ++.|.
T Consensus 283 ~v~l~~~l~~~~~~~l~~~ad~vv~~S---Gg~~--~EA~a~------g~PvV~~~~~~~~~e~-------v~~g~---- 340 (403)
T 3ot5_A 283 RIHLIEPLDAIDFHNFLRKSYLVFTDS---GGVQ--EEAPGM------GVPVLVLRDTTERPEG-------IEAGT---- 340 (403)
T ss_dssp TEEEECCCCHHHHHHHHHHEEEEEECC---HHHH--HHGGGT------TCCEEECCSSCSCHHH-------HHHTS----
T ss_pred CEEEeCCCCHHHHHHHHHhcCEEEECC---ccHH--HHHHHh------CCCEEEecCCCcchhh-------eeCCc----
Confidence 45555555 356777899999876433 4444 455544 8999998433334432 22221
Q ss_pred ccCCeEEcCCHHHHHHHHHhhc
Q 031213 114 QRSILVSAPNAKELVQKLEEYV 135 (164)
Q Consensus 114 ~~~~i~~~~~~ee~~~~l~~~~ 135 (164)
.+.+-.|++++.+.+.+..
T Consensus 341 ---~~lv~~d~~~l~~ai~~ll 359 (403)
T 3ot5_A 341 ---LKLIGTNKENLIKEALDLL 359 (403)
T ss_dssp ---EEECCSCHHHHHHHHHHHH
T ss_pred ---EEEcCCCHHHHHHHHHHHH
Confidence 1222348888888776653
No 57
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=51.45 E-value=82 Score=24.64 Aligned_cols=44 Identities=30% Similarity=0.338 Sum_probs=30.1
Q ss_pred HHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccc
Q 031213 50 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 94 (164)
Q Consensus 50 ~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw 94 (164)
.++..+.|+|+|| .|...+++.+.-..-+..=..+.+++.+.||
T Consensus 36 ~~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (251)
T 3tx2_A 36 AERGKAMIVLTGG-GTGIALLKHLRDVASGLDWTNVHVFWGDDRY 79 (251)
T ss_dssp HHHSCEEEEECCS-HHHHHHHHHHHHHHTTSCGGGEEEEESEEES
T ss_pred HhCCCEEEEECCC-chHHHHHHHHHhhccCCCCceeEEEeeeecc
Confidence 4478899999999 4777777777643311222567788887787
No 58
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=49.05 E-value=37 Score=28.16 Aligned_cols=37 Identities=27% Similarity=0.327 Sum_probs=29.6
Q ss_pred HhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 51 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 51 ~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+..|+||+.= |.-||+|-...+++.- ..+||||+.+.
T Consensus 87 ~~~dGvVItH-GTDTm~~TA~~L~~~l--~~~kPVVlTGa 123 (334)
T 3nxk_A 87 EGIDGVVITH-GTDTMEETAYFLNLTI--KSDKPVVLVGA 123 (334)
T ss_dssp TTCCEEEEEC-CSTTHHHHHHHHHHHC--CCCSCEEEECC
T ss_pred cCCCeEEEEC-CCchHHHHHHHHHHHc--CCCCCEEEECC
Confidence 4578888775 5899999999998753 45899999863
No 59
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=47.74 E-value=32 Score=28.06 Aligned_cols=72 Identities=26% Similarity=0.201 Sum_probs=43.3
Q ss_pred HHHHHHHHhCCeEEEcc---C-CCcCHHHHHHHHHHHHcCCCCccEEEE-ecCccchHHHHHHHHHHHcCCCCccccCCe
Q 031213 44 QRKAEMARNSDCFIALP---G-GYGTLEELLEVITWAQLGIHDKPVGLI-NVDGYYNSLLNFIDKAVDDGFISPSQRSIL 118 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlP---G-G~GTLdEl~e~~t~~qlg~~~kPivll-n~~gfw~~l~~~l~~~~~egfi~~~~~~~i 118 (164)
+....++..||+|++.+ + |--+ +.|+++. .+|+|.- +.. -+..+.+ .+.+.|+ +
T Consensus 269 ~dl~~~y~~aDv~vl~ss~~e~gg~~---~lEAmA~------G~PVI~~~~~~-~~~e~~~---~~~~~G~--------l 327 (374)
T 2xci_A 269 GILKELYPVGKIAIVGGTFVNIGGHN---LLEPTCW------GIPVIYGPYTH-KVNDLKE---FLEKEGA--------G 327 (374)
T ss_dssp SCHHHHGGGEEEEEECSSSSSSCCCC---CHHHHTT------TCCEEECSCCT-TSHHHHH---HHHHTTC--------E
T ss_pred HHHHHHHHhCCEEEECCcccCCCCcC---HHHHHHh------CCCEEECCCcc-ChHHHHH---HHHHCCC--------E
Confidence 34456788999877743 2 2233 5666654 8999963 222 2333333 2333443 5
Q ss_pred EEcCCHHHHHHHHHhhcC
Q 031213 119 VSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 119 ~~~~~~ee~~~~l~~~~~ 136 (164)
+.++|++++.+.|.+...
T Consensus 328 ~~~~d~~~La~ai~~ll~ 345 (374)
T 2xci_A 328 FEVKNETELVTKLTELLS 345 (374)
T ss_dssp EECCSHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHh
Confidence 667899999888877643
No 60
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=47.18 E-value=63 Score=25.63 Aligned_cols=71 Identities=20% Similarity=0.264 Sum_probs=43.9
Q ss_pred HHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc
Q 031213 44 QRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 121 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~ 121 (164)
+....++..||++|.-. .|+|+ =++|++.. .+|+|..+..|.-+ ++.......++-.
T Consensus 276 ~~~~~~~~~adv~v~ps~~e~~~~--~~~EAma~------G~PvI~~~~~~~~e-------------~v~~~~~g~~~~~ 334 (394)
T 2jjm_A 276 DNVAELLAMSDLMLLLSEKESFGL--VLLEAMAC------GVPCIGTRVGGIPE-------------VIQHGDTGYLCEV 334 (394)
T ss_dssp SCTHHHHHTCSEEEECCSCCSCCH--HHHHHHHT------TCCEEEECCTTSTT-------------TCCBTTTEEEECT
T ss_pred hhHHHHHHhCCEEEeccccCCCch--HHHHHHhc------CCCEEEecCCChHH-------------HhhcCCceEEeCC
Confidence 34456788899877532 45555 36777765 89999988654321 2222222333334
Q ss_pred CCHHHHHHHHHhhc
Q 031213 122 PNAKELVQKLEEYV 135 (164)
Q Consensus 122 ~~~ee~~~~l~~~~ 135 (164)
+|++++.+.|.+..
T Consensus 335 ~d~~~la~~i~~l~ 348 (394)
T 2jjm_A 335 GDTTGVADQAIQLL 348 (394)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 58999988887654
No 61
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=46.41 E-value=44 Score=27.43 Aligned_cols=85 Identities=13% Similarity=0.119 Sum_probs=47.2
Q ss_pred HHHHHHHHHhCCeEEEc--cCCCcCHHHHHHHH-HHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCe-
Q 031213 43 HQRKAEMARNSDCFIAL--PGGYGTLEELLEVI-TWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSIL- 118 (164)
Q Consensus 43 ~~Rk~~m~~~sDafIvl--PGG~GTLdEl~e~~-t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i- 118 (164)
++....++..||+||.- ..|+|. =+.|++ -+...=.+.+|+|..+. +.......+
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~--~~lEAm~Kl~eYla~G~PVIas~~-------------------v~~~~~G~l~ 333 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPV--YLADSSMKLLQYDFFGLPAVCPNA-------------------VVGPYKSRFG 333 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCT--THHHHCHHHHHHHHHTCCEEEEGG-------------------GTCSCSSEEE
T ss_pred HHHHHHHHHhcCEEEECCCcccCch--HHHHHHHHHHHHhhCCCcEEEehh-------------------cccCcceEEE
Confidence 35566788999988752 355655 234444 00000012899998753 112223445
Q ss_pred EEcCCHHHHHHHHHhhcCCC-CCccccceec
Q 031213 119 VSAPNAKELVQKLEEYVPLH-DGVVAKVKWE 148 (164)
Q Consensus 119 ~~~~~~ee~~~~l~~~~~~~-~~~~~~~~w~ 148 (164)
+-.+|++++.+.|.+..... .+....++|.
T Consensus 334 v~~~d~~~la~ai~~ll~~~~~~~~~~~sw~ 364 (406)
T 2hy7_A 334 YTPGNADSVIAAITQALEAPRVRYRQCLNWS 364 (406)
T ss_dssp ECTTCHHHHHHHHHHHHHCCCCCCSCCCBHH
T ss_pred eCCCCHHHHHHHHHHHHhCcchhhhhcCCHH
Confidence 55678999888887654222 1223456776
No 62
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=46.39 E-value=29 Score=30.20 Aligned_cols=65 Identities=20% Similarity=0.312 Sum_probs=38.8
Q ss_pred eEEEccCCCcCHHHHHHHHHHHHcCC-CCccEEEEe-cCccchHHHHHHHHHHHc-CCCCccccCCe--EEcCCHHHHHH
Q 031213 55 CFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLIN-VDGYYNSLLNFIDKAVDD-GFISPSQRSIL--VSAPNAKELVQ 129 (164)
Q Consensus 55 afIvlPGG~GTLdEl~e~~t~~qlg~-~~kPivlln-~~gfw~~l~~~l~~~~~e-gfi~~~~~~~i--~~~~~~ee~~~ 129 (164)
++|+|.||.|| ++|. .+||++=+. ..-|.+-+++.|..+... |. ....+ ....+.+.+.+
T Consensus 81 ~vviLAGGlGT-----------RLg~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~----~ip~vimts~~t~e~t~~ 145 (469)
T 2icy_A 81 VVLKLNGGLGT-----------TMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGC----KVPLVLMNSFNTHDDTHK 145 (469)
T ss_dssp EEEEEECCBSG-----------GGTCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSC----CCCEEEEECTTTHHHHHH
T ss_pred eEEEEcCCccc-----------cCCCCCCccccccCCCCCHHHHHHHHHHHHHHhcCC----CccEEEEeCCCCHHHHHH
Confidence 69999999999 2343 588887554 333666555555544221 31 12332 33344788888
Q ss_pred HHHhh
Q 031213 130 KLEEY 134 (164)
Q Consensus 130 ~l~~~ 134 (164)
++++.
T Consensus 146 ~f~~~ 150 (469)
T 2icy_A 146 IVEKY 150 (469)
T ss_dssp HHGGG
T ss_pred HHHhc
Confidence 88764
No 63
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=45.03 E-value=94 Score=24.24 Aligned_cols=45 Identities=24% Similarity=0.218 Sum_probs=30.4
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccc
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 94 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw 94 (164)
+.++..+.|+|+|| .|...+++.+.-..-+..=+.+.+++.+.||
T Consensus 35 ~~~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (248)
T 3oc6_A 35 IGERGQATIVLTGG-GTGIGLLKRVRERSGEIDWSKVHIYWGDERF 79 (248)
T ss_dssp HHHHSCEEEEECCS-HHHHHHHHHHHHTGGGSCGGGEEEEESEEEC
T ss_pred HHhCCCEEEEECCC-ccHHHHHHHHHhhccCCCcceEEEEEeeecc
Confidence 34478899999999 4777777777642211222457778877777
No 64
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=44.69 E-value=35 Score=28.19 Aligned_cols=41 Identities=12% Similarity=0.119 Sum_probs=30.8
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
...+..|+||++= |.=||+|-..++++.- ...+||||+.+.
T Consensus 69 ~~~~~~dG~VItH-GTDTmeeTA~~Ls~ll-~~~~kPVVlTGA 109 (328)
T 1wls_A 69 KEVWEYDGIVITH-GTDTMAYSASMLSFML-RNPPIPIVLTGS 109 (328)
T ss_dssp HHTTTCSEEEEEC-CGGGHHHHHHHHHHHE-ESCSSEEEEECC
T ss_pred HHhccCCeEEEEc-CCchHHHHHHHHHHHH-hCCCCCEEEECC
Confidence 3344679999985 5899999999888532 235899999764
No 65
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=42.80 E-value=46 Score=28.75 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=30.1
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
..|+|||+= |.=||+|-..++++.- ..+|||||.+.
T Consensus 167 ~~DG~VItH-GTDTMeeTA~~Lsl~l--~~~KPVVlTGA 202 (435)
T 2d6f_A 167 GADGVVVAH-GTDTMHYTSAALSFML--RTPVPVVFTGA 202 (435)
T ss_dssp TCSEEEEEC-CTTTHHHHHHHHHHHE--ECSSCEEEECC
T ss_pred CCCeEEEEc-CcchHHHHHHHHHHHh--CCCCCEEEECC
Confidence 679999985 5899999999998864 45899999764
No 66
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=42.80 E-value=69 Score=25.71 Aligned_cols=71 Identities=18% Similarity=0.228 Sum_probs=42.8
Q ss_pred HHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEEc
Q 031213 44 QRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 121 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~ 121 (164)
+....++..||+||.-- .|+|+ =++|++.. .+|+|..+..|. .+ ++. ......++-.
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~--~~~Eama~------G~PvI~~~~~~~----~e----~i~-----~~~~g~~~~~ 375 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGL--VAMEAQAS------GTPVIAARVGGL----PI----AVA-----EGETGLLVDG 375 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCH--HHHHHHHT------TCCEEEESCTTH----HH----HSC-----BTTTEEEESS
T ss_pred HHHHHHHHhCCEEEECccccCCch--HHHHHHHc------CCCEEecCCCCh----hH----Hhh-----CCCcEEECCC
Confidence 45667788999877532 25554 36677754 899999876432 12 121 1112223334
Q ss_pred CCHHHHHHHHHhhc
Q 031213 122 PNAKELVQKLEEYV 135 (164)
Q Consensus 122 ~~~ee~~~~l~~~~ 135 (164)
+|++++.+.|.+..
T Consensus 376 ~d~~~la~~i~~l~ 389 (438)
T 3c48_A 376 HSPHAWADALATLL 389 (438)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 58999988887654
No 67
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=42.20 E-value=53 Score=27.46 Aligned_cols=45 Identities=18% Similarity=0.194 Sum_probs=32.8
Q ss_pred HHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 44 QRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+|-....+..|+|||+= |.=||+|-..++++.- ...+|||||.+.
T Consensus 93 ~~I~~~~~~~dG~VItH-GTDTmeeTA~~Ls~~l-~~~~kPVVlTGA 137 (358)
T 2him_A 93 EDIKAHYDDYDGFVILH-GTDTMAYTASALSFML-ENLGKPVIVTGS 137 (358)
T ss_dssp HHHHHHGGGCSEEEEEC-CSTTHHHHHHHHHHHE-ETCCSCEEEECC
T ss_pred HHHHHHHhcCCeEEEec-CchHHHHHHHHHHHHH-hcCCCCEEEeCC
Confidence 33333445689999985 5899999999988742 235899999764
No 68
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=41.97 E-value=8.7 Score=29.49 Aligned_cols=88 Identities=15% Similarity=0.182 Sum_probs=55.0
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHH----cCCCCccEEEEec--CccchH--HHHHHHHHHHcCC--CCccccCCe
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQ----LGIHDKPVGLINV--DGYYNS--LLNFIDKAVDDGF--ISPSQRSIL 118 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~q----lg~~~kPivlln~--~gfw~~--l~~~l~~~~~egf--i~~~~~~~i 118 (164)
+...+|++|+.|-..+|+.-+..=++-+- .-..++|+++.-. ...|.. .++.+..+.+.|+ +++.....+
T Consensus 78 l~~~aD~~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f 157 (194)
T 1p3y_1 78 IGRWADIYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAF 157 (194)
T ss_dssp HHHHCSEEEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEECCCBCCC--
T ss_pred ccccCCEEEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEECCCCCccc
Confidence 34679999999999999877653111000 0015789998743 145654 3445667777773 454444222
Q ss_pred ----------EEcCCHHHHHHHHHhhcC
Q 031213 119 ----------VSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 119 ----------~~~~~~ee~~~~l~~~~~ 136 (164)
.--.+++++++++.+...
T Consensus 158 ~lacg~~g~~g~~~~~~~iv~~v~~~l~ 185 (194)
T 1p3y_1 158 EIATGTRKPNRGLITPDKALLAIEKGFK 185 (194)
T ss_dssp ----------CBCCCHHHHHHHHHHHCC
T ss_pred ccccCCcCcCCCCCCHHHHHHHHHHHhc
Confidence 345789999999987654
No 69
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=41.76 E-value=38 Score=28.10 Aligned_cols=36 Identities=28% Similarity=0.379 Sum_probs=29.2
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
..|+||+.= |.=||+|-...+++.. ..+|||||.+.
T Consensus 90 ~~dGvVItH-GTDTm~~TA~~L~~~l--~~~kPVVlTGa 125 (337)
T 4pga_A 90 DVDGIVITH-GTDTLEETAYFLNLVQ--KTDKPIVVVGS 125 (337)
T ss_dssp TCSEEEEEC-CSTTHHHHHHHHHHHC--CCCSCEEEECC
T ss_pred CCCeEEEEC-CCccHHHHHHHHHHHc--CCCCCEEEeCC
Confidence 468888775 5899999999998764 45899999864
No 70
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=41.33 E-value=24 Score=28.32 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=24.8
Q ss_pred HhCCeEEEccCCC-cCHHHHHHHHHHHHcCCCCccEEEEecCcc
Q 031213 51 RNSDCFIALPGGY-GTLEELLEVITWAQLGIHDKPVGLINVDGY 93 (164)
Q Consensus 51 ~~sDafIvlPGG~-GTLdEl~e~~t~~qlg~~~kPivlln~~gf 93 (164)
..+|++|||.||. +.+++..+.+.- +. .|+++-+..|.
T Consensus 35 ~~~D~IVVLG~~~~~Rl~~A~~L~~~---g~--~~lIvSGG~g~ 73 (266)
T 3ca8_A 35 YQADCVILAGNAVMPTIDAACKIARD---QQ--IPLLISGGIGH 73 (266)
T ss_dssp CCCSEEEEESCCCHHHHHHHHHHHHH---HT--CCEEEECCSST
T ss_pred CCCCEEEECCCCchHHHHHHHHHHHc---CC--CcEEEECCCCC
Confidence 3699999999997 566665555532 32 37776665454
No 71
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=41.08 E-value=57 Score=26.78 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=29.2
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
..|+|||+= |.=||+|-..++++.- . .+|||||.+.
T Consensus 85 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGA 120 (327)
T 1o7j_A 85 DVDGVVITH-GTDTVEESAYFLHLTV-K-SDKPVVFVAA 120 (327)
T ss_dssp TCCEEEEEC-CSTTHHHHHHHHHHHC-C-CCSCEEEECC
T ss_pred CCCEEEEec-CchhHHHHHHHHHHHh-C-CCCCEEEeCC
Confidence 468999985 5899999999998753 3 6899999764
No 72
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=40.78 E-value=22 Score=28.80 Aligned_cols=38 Identities=18% Similarity=0.312 Sum_probs=25.5
Q ss_pred HhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 51 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 51 ~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+..| +|+.-||=||+.|+...+.-.. ...+.|+.+++.
T Consensus 81 ~~~d-~vvv~GGDGTl~~v~~~l~~~~-~~~~~plgiiP~ 118 (332)
T 2bon_A 81 FGVA-TVIAGGGDGTINEVSTALIQCE-GDDIPALGILPL 118 (332)
T ss_dssp HTCS-EEEEEESHHHHHHHHHHHHHCC-SSCCCEEEEEEC
T ss_pred cCCC-EEEEEccchHHHHHHHHHhhcc-cCCCCeEEEecC
Confidence 4456 4555799999999998875311 124578887754
No 73
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=40.34 E-value=1.2e+02 Score=23.00 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=26.4
Q ss_pred CCeEEEccCCCcCHHHHHHHHHHH--HcCCCCccEEEEecCccc
Q 031213 53 SDCFIALPGGYGTLEELLEVITWA--QLGIHDKPVGLINVDGYY 94 (164)
Q Consensus 53 sDafIvlPGG~GTLdEl~e~~t~~--qlg~~~kPivlln~~gfw 94 (164)
.+..|+++|| .|+.++++.+.-. +-...-+.+-+++.++||
T Consensus 28 ~~~~i~lsgG-~T~~~~~~~L~~~~~~~~~~~~~v~v~~lder~ 70 (242)
T 2bkx_A 28 PDAVLGLATG-GTPEGTYRQLIRLHQTENLSFQNITTVNLDEYA 70 (242)
T ss_dssp TTCEEEECCS-STTHHHHHHHHHHHHHSCCCCTTCEEEESEEET
T ss_pred CCeEEEECCC-CCHHHHHHHHHHHhhccCCChhheEEEeCcccc
Confidence 4678888887 6888888887632 112233456666666777
No 74
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=40.31 E-value=43 Score=26.47 Aligned_cols=71 Identities=23% Similarity=0.329 Sum_probs=43.8
Q ss_pred HHHHHHHHhCCeEEEc---cCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEE
Q 031213 44 QRKAEMARNSDCFIAL---PGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS 120 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvl---PGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~ 120 (164)
+....++..||++|.. ..|+|+ =++|++.. .+|+|..+.. .+.+ ++.+| ....++-
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~--~~~Ea~a~------G~PvI~~~~~----~~~e----~i~~~-----~~g~~~~ 332 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGI--VLVEAMAA------GTAVVASDLD----AFRR----VLADG-----DAGRLVP 332 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCH--HHHHHHHH------TCEEEECCCH----HHHH----HHTTT-----TSSEECC
T ss_pred HHHHHHHHHCCEEEecCCCCCCCch--HHHHHHHc------CCCEEEecCC----cHHH----HhcCC-----CceEEeC
Confidence 4457788999998875 345564 47777776 8999987652 2222 22221 1112222
Q ss_pred cCCHHHHHHHHHhhc
Q 031213 121 APNAKELVQKLEEYV 135 (164)
Q Consensus 121 ~~~~ee~~~~l~~~~ 135 (164)
.+|++++.+.|.+..
T Consensus 333 ~~d~~~l~~~i~~l~ 347 (406)
T 2gek_A 333 VDDADGMAAALIGIL 347 (406)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 378888888887654
No 75
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=39.73 E-value=56 Score=26.91 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=29.2
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
..|+|||+= |.=||+|-..++++.- . .+|||||.+.
T Consensus 82 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGA 117 (331)
T 1agx_A 82 SVNGVVITH-GTDTMEETAFFLNLVV-H-TDKPIVLVGS 117 (331)
T ss_dssp TCCEEEEEC-CGGGHHHHHHHHHHHC-C-CSSCEEEECC
T ss_pred CCCEEEEec-CcchHHHHHHHHHHHc-C-CCCCEEEeCC
Confidence 468999885 6899999999998653 3 6899999864
No 76
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=39.45 E-value=86 Score=24.14 Aligned_cols=94 Identities=15% Similarity=0.001 Sum_probs=56.9
Q ss_pred cCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcC-CCCccEEEEecCccch---------HHHHHHHHHHHcC
Q 031213 39 VADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYN---------SLLNFIDKAVDDG 108 (164)
Q Consensus 39 ~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg-~~~kPivlln~~gfw~---------~l~~~l~~~~~eg 108 (164)
-.++..|.+.=++.|+.||++-|--=.-.. ...|...+-- ...+|||.++.+ |-. .+...++.+-..-
T Consensus 66 e~tIKrrLReRI~~Sk~vIllIs~~T~~s~-~v~wEIe~Ai~~~~~PII~Vy~~-~~~~~~i~~~~g~~~~~~~~~wpk~ 143 (189)
T 3hyn_A 66 EKTLKPRLHTRLDNSKNIILFLSSITANSR-ALREEMNYGIGTKGLPVIVIYPD-YDKKSDIVDSNGNFKKQIKDLWDKL 143 (189)
T ss_dssp TTTHHHHHHHHHHTEEEEEEECCTTCCCCH-HHHHHHHHHTTTTCCCEEEEETT-CCSGGGTBCTTSCBCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCccccc-hhHHHHHHHHHhcCCcEEEEECC-ccccchhhhccccchhhHhhcCCcc
Confidence 356778888889999999999886543332 3333332222 458999999886 220 0112222221110
Q ss_pred ---CCCccccCCeEEcCCHHHHHHHHHhh
Q 031213 109 ---FISPSQRSILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 109 ---fi~~~~~~~i~~~~~~ee~~~~l~~~ 134 (164)
-++......+++--.++.+.+.|.++
T Consensus 144 p~~r~~~~~~~~ihVPf~~~~I~~Al~n~ 172 (189)
T 3hyn_A 144 PAFRDNMSSVATLHIPCTKSVIISALNNE 172 (189)
T ss_dssp HHHHTTGGGSEEEEEESCHHHHHHHHTCG
T ss_pred hhhhccccCCceEEecCCHHHHHHHHhcc
Confidence 12234566788888999888888775
No 77
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=38.96 E-value=67 Score=26.45 Aligned_cols=36 Identities=25% Similarity=0.261 Sum_probs=29.2
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
..|+|||+= |.=||+|-..++++.- . .+|||||.+.
T Consensus 85 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGA 120 (332)
T 2wlt_A 85 RIQGVVITH-GTDTLEESAYFLNLVL-H-STKPVVLVGA 120 (332)
T ss_dssp TCCEEEEEC-CSSSHHHHHHHHHHHC-C-CSSCEEEECC
T ss_pred CCCEEEEec-CchhHHHHHHHHHHHh-C-CCCCEEEECC
Confidence 468999985 5899999999998653 3 6899999764
No 78
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=38.77 E-value=48 Score=25.65 Aligned_cols=44 Identities=16% Similarity=0.278 Sum_probs=31.9
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccc
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 94 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw 94 (164)
.+.++..+.|+|+|| .|...+++.+.- -+..=+-+.+++.+.||
T Consensus 29 ~i~~~~~~~l~lsgG-stp~~~y~~L~~--~~i~w~~v~~f~~DEr~ 72 (232)
T 3lhi_A 29 ALDEKGGAVLAVSGG-RSPIAFFNALSQ--KDLDWKNVGITLADERI 72 (232)
T ss_dssp HHHHHSCEEEEECCS-STTHHHHHHHHT--SCCCGGGEEEEESEEES
T ss_pred HHHhCCCEEEEEeCC-CCHHHHHHHHHh--cCCCchheEEEEeeecc
Confidence 445678999999999 588888888862 22222567778777787
No 79
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=38.32 E-value=34 Score=29.96 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=38.6
Q ss_pred CeEEEccCCCcCHHHHHHHHHHHHcCC-CCccEEEE---ecCccchHHHHHHHH---HHH--cCCCCccccCCeEEc--C
Q 031213 54 DCFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLI---NVDGYYNSLLNFIDK---AVD--DGFISPSQRSILVSA--P 122 (164)
Q Consensus 54 DafIvlPGG~GTLdEl~e~~t~~qlg~-~~kPivll---n~~gfw~~l~~~l~~---~~~--egfi~~~~~~~i~~~--~ 122 (164)
=++|+|-||.|| ++|. .+||++=+ +..-|.+-..+.|.. +.. .| .......++++ .
T Consensus 103 vavViLAGG~GT-----------RLg~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G--~~~~ip~vImtS~~ 169 (505)
T 1jv1_A 103 VAVLLLAGGQGT-----------RLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG--NKCIIPWYIMTSGR 169 (505)
T ss_dssp EEEEEECCCCCC-----------TTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS--SCCCCCEEEEECTT
T ss_pred eEEEEEcCCccc-----------cCCCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCC
Confidence 469999999999 3353 47887655 333466666665443 221 13 11123333333 3
Q ss_pred CHHHHHHHHHh
Q 031213 123 NAKELVQKLEE 133 (164)
Q Consensus 123 ~~ee~~~~l~~ 133 (164)
+.+.+.+++++
T Consensus 170 t~e~t~~~f~~ 180 (505)
T 1jv1_A 170 TMESTKEFFTK 180 (505)
T ss_dssp THHHHHHHHHH
T ss_pred CHHHHHHHHHh
Confidence 47788888876
No 80
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=38.13 E-value=70 Score=26.28 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=29.3
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
..|+|||+= |.=||+|-..++++.- . .+|||||.+.
T Consensus 83 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGA 118 (330)
T 1wsa_A 83 ETEAVIITH-GTDTMEETAFFLNLTV-K-SQKPVVLVGA 118 (330)
T ss_dssp TCCCEEEEC-CSSSHHHHHHHHHHHC-C-CSSCEEEECC
T ss_pred CCCEEEEEc-CcchHHHHHHHHHHHc-C-CCCCEEEeCC
Confidence 468999985 5899999999998753 3 6899999764
No 81
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=36.89 E-value=78 Score=26.18 Aligned_cols=70 Identities=17% Similarity=0.076 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCccccCCeEE
Q 031213 43 HQRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS 120 (164)
Q Consensus 43 ~~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~ 120 (164)
.+....++..||+||... -|+|.. ++|+++. .+|+|. +..|.. .+ +++ .....++-
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~--~lEAmA~------G~PVV~-~~~g~~-e~-------v~~-----~~~G~lv~ 362 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYP--PLEMAHF------GLRVIT-NKYENK-DL-------SNW-----HSNIVSLE 362 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSH--HHHHHHT------TCEEEE-ECBTTB-CG-------GGT-----BTTEEEES
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcH--HHHHHhC------CCcEEE-eCCCcc-hh-------hhc-----CCCEEEeC
Confidence 455667889999988754 477864 6888864 899998 654532 21 211 11222344
Q ss_pred cCCHHHHHHHHHhh
Q 031213 121 APNAKELVQKLEEY 134 (164)
Q Consensus 121 ~~~~ee~~~~l~~~ 134 (164)
..|++++.+.|.+.
T Consensus 363 ~~d~~~la~ai~~l 376 (413)
T 2x0d_A 363 QLNPENIAETLVEL 376 (413)
T ss_dssp SCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 57888888777553
No 82
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=36.84 E-value=59 Score=25.21 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=47.3
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHH--HHHHHHHcCCCCccccC-CeEE----
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLN--FIDKAVDDGFISPSQRS-ILVS---- 120 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~--~l~~~~~egfi~~~~~~-~i~~---- 120 (164)
.+.+...+.|+|+|| .|...+++.+.- -+..=+-+.+++.+.||=+.-. --..+..+.|+++-... .++.
T Consensus 32 ~i~~~~~~~l~lsgG-stp~~~y~~L~~--~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~~~~~~~~~~~~~~ 108 (233)
T 3nwp_A 32 AVDARGKASLVVSGG-STPLKLFQLLSM--KSIDWSDVYITLADERWVEADADASNERLVREHLLQNRASNAKFRGLKNM 108 (233)
T ss_dssp HHHHHSCEEEEECCS-STTHHHHHHHHH--CCSCGGGEEEEESEEESSCTTSTTCHHHHHHHHTSSGGGGGSEECCSCCS
T ss_pred HHHhCCCEEEEEcCC-CCHHHHHHHHHh--cCCChhHeEEEeCeecccCCCChHHHHHHHHHHhhccCCccceEEcCCCC
Confidence 345678999999999 588888888863 2222256777887778733111 01123333444432221 1221
Q ss_pred cCCHHHHHHHHHhh
Q 031213 121 APNAKELVQKLEEY 134 (164)
Q Consensus 121 ~~~~ee~~~~l~~~ 134 (164)
..|+++..+..++.
T Consensus 109 ~~~~~~~~~~ye~~ 122 (233)
T 3nwp_A 109 FSTAEAGADMAAES 122 (233)
T ss_dssp SSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 24677776666543
No 83
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=36.22 E-value=97 Score=25.36 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=43.6
Q ss_pred HHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCC----CCccccCCeE
Q 031213 46 KAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGF----ISPSQRSILV 119 (164)
Q Consensus 46 k~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egf----i~~~~~~~i~ 119 (164)
...++..||+||.-- .|+|. =+.|+++. .+|+|..+..| +.+ ++.+|- ........++
T Consensus 360 ~~~~~~~adv~v~pS~~E~~g~--~~lEAma~------G~PvI~s~~gg----~~e----~v~~~~~~~~~~~~~~G~l~ 423 (485)
T 2qzs_A 360 SHRIMGGADVILVPSRFEPCGL--TQLYGLKY------GTLPLVRRTGG----LAD----TVSDCSLENLADGVASGFVF 423 (485)
T ss_dssp HHHHHHHCSEEEECCSCCSSCS--HHHHHHHH------TCEEEEESSHH----HHH----HCCBCCHHHHHTTCCCBEEE
T ss_pred HHHHHHhCCEEEECCccCCCcH--HHHHHHHC------CCCEEECCCCC----ccc----eeccCccccccccccceEEE
Confidence 356788999877532 46666 37777776 89999987632 222 222210 0000223334
Q ss_pred EcCCHHHHHHHHHhhc
Q 031213 120 SAPNAKELVQKLEEYV 135 (164)
Q Consensus 120 ~~~~~ee~~~~l~~~~ 135 (164)
-..|++++.+.|.+..
T Consensus 424 ~~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 424 EDSNAWSLLRAIRRAF 439 (485)
T ss_dssp CSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4468998888887754
No 84
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=35.45 E-value=19 Score=24.71 Aligned_cols=45 Identities=11% Similarity=0.297 Sum_probs=31.7
Q ss_pred cCccchHHHHHHHHHHHcCCCCccccCCeEE-----cCCHHHHHHHHHhhcCCC
Q 031213 90 VDGYYNSLLNFIDKAVDDGFISPSQRSILVS-----APNAKELVQKLEEYVPLH 138 (164)
Q Consensus 90 ~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~-----~~~~ee~~~~l~~~~~~~ 138 (164)
.+.+.+.+++.+...+. .|.-.++|++ -+||+++++.+++|.+..
T Consensus 29 ~E~e~d~ll~~fe~ite----HP~gSDLIfyP~~~~e~SPEgIv~~IKeWRa~n 78 (94)
T 3u43_A 29 TEEDDNKLVREFERLTE----HPDGSDLIYYPRDDREDSPEGIVKEIKEWRAAN 78 (94)
T ss_dssp SHHHHHHHHHHHHHHHC----CTTTTHHHHSCCTTSCSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCC----CCCccCeeeeCCCCCCCCHHHHHHHHHHHHHHc
Confidence 44577777777766643 3445667766 368999999999997553
No 85
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=34.91 E-value=48 Score=27.93 Aligned_cols=96 Identities=14% Similarity=0.012 Sum_probs=55.3
Q ss_pred HHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHc-CCCCccEEEEecCc-cchHHHHHHHHHHHcCCCCccccCCeEE
Q 031213 43 HQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQL-GIHDKPVGLINVDG-YYNSLLNFIDKAVDDGFISPSQRSILVS 120 (164)
Q Consensus 43 ~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~ql-g~~~kPivlln~~g-fw~~l~~~l~~~~~egfi~~~~~~~i~~ 120 (164)
.+|-...++.||.+||++=+ ++..=. ..+-+. ..+..|++++|.+. .++ ...-+.+
T Consensus 197 ~~~A~~~~~~aDllLViGTS-L~V~Pa---a~Lp~~a~~~G~~vviIN~~pT~~d------------------~~adl~i 254 (355)
T 3pki_A 197 LALADEASRNADLSITLGTS-LQIRPS---GNLPLATKRRGGRLVIVNLQPTKHD------------------RHADLRI 254 (355)
T ss_dssp HHHHHHHHHHCSEEEEESCC-CCSTTG---GGTTHHHHHTTCEEEEECSSCCTTG------------------GGCSEEE
T ss_pred HHHHHHHHhcCCEEEEEeeC-CCchhh---hhhHHHHHhcCCEEEEECCCCCCCC------------------CccCEEE
Confidence 45666788999999987433 221111 111111 12467999999752 111 2234678
Q ss_pred cCCHHHHHHHHHhhcCCCCCccccceeccccccccccchh
Q 031213 121 APNAKELVQKLEEYVPLHDGVVAKVKWEAEQVELNTSLKT 160 (164)
Q Consensus 121 ~~~~ee~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 160 (164)
..+.++++..|.+......-.|..-.=..+.+|.-++.+|
T Consensus 255 ~g~a~evl~~L~~~Lg~~iP~~~~~~~~~~~~~~~~~~~~ 294 (355)
T 3pki_A 255 HGYVDEVMTRLMEHLGLEIPAWDGPRVLERALPPLPRPPT 294 (355)
T ss_dssp CSCHHHHHHHHHHHTTCCCCCCCSCEEECSCCSCCCBCCB
T ss_pred eCCHHHHHHHHHHHhCCCCCCCCCCceecccCCCcCCCCC
Confidence 8899999999877655544344444444555555555443
No 86
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=34.34 E-value=22 Score=31.34 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=37.7
Q ss_pred CeEEEccCCCcCHHHHHHHHHHHHcCC-CCccEEEEe-cCccchHHHHHHHHHHHcCCCCccccCCeEEc--CCHHHHHH
Q 031213 54 DCFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLIN-VDGYYNSLLNFIDKAVDDGFISPSQRSILVSA--PNAKELVQ 129 (164)
Q Consensus 54 DafIvlPGG~GTLdEl~e~~t~~qlg~-~~kPivlln-~~gfw~~l~~~l~~~~~egfi~~~~~~~i~~~--~~~ee~~~ 129 (164)
=++|+|-||.|| ++|. .+||++=+. ..-|.+-..+.|..+... .......++.+ .+.+.+.+
T Consensus 76 ~avViLAGGlGT-----------RLg~~~PK~llpV~~gk~fLe~~ie~l~~~~~~---~g~~ip~viMtS~~t~e~t~~ 141 (505)
T 2oeg_A 76 TVVLKLNGGLGT-----------GMGLCDAKTLLEVKDGKTFLDFTALQVQYLRQH---CSEHLRFMLMDSFNTSASTKS 141 (505)
T ss_dssp EEEEEEECCCCG-----------GGTCCSCGGGSEEETTEEHHHHHHHHHHHHHHH---TCTTCEEEEEECHHHHHHHHH
T ss_pred ceEEEEcCCccc-----------ccCCCCCCcccccCCCCcHHHHHHHHHHHHHHh---cCCCcCEEEEeCCCCHHHHHH
Confidence 469999999999 3553 588887665 333555555555444221 11122333333 33677778
Q ss_pred HHH
Q 031213 130 KLE 132 (164)
Q Consensus 130 ~l~ 132 (164)
+++
T Consensus 142 ~f~ 144 (505)
T 2oeg_A 142 FLK 144 (505)
T ss_dssp HHH
T ss_pred HHh
Confidence 887
No 87
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=34.17 E-value=1.6e+02 Score=23.40 Aligned_cols=87 Identities=14% Similarity=0.021 Sum_probs=44.7
Q ss_pred CHHHHHHHHHH--hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCC-----c-
Q 031213 41 DMHQRKAEMAR--NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFIS-----P- 112 (164)
Q Consensus 41 ~m~~Rk~~m~~--~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~-----~- 112 (164)
++.+=.+.+.+ ..++++..--++|+.+|.+..+--. ..+||||.+.. |-..+--.. +.-.|-+- .
T Consensus 186 ~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~-G~~~~~~~~---~~Htgal~~~~~g~~ 258 (288)
T 1oi7_A 186 TFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD---HMKKPVVGFIG-GRSAPKGKR---MGHAGAIIMGNVGTP 258 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH---HCCSCEEEEES-CC---------------------CCSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEe-cCCCCcccc---CcchhhcccCCCCCH
Confidence 44444444443 4557777777888887755443322 34799999865 444411110 11111110 0
Q ss_pred c------ccCCeEEcCCHHHHHHHHHhh
Q 031213 113 S------QRSILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 113 ~------~~~~i~~~~~~ee~~~~l~~~ 134 (164)
. ..--+..++|++|+++.+++.
T Consensus 259 ~~~~aa~~~aGv~~~~~~~el~~~~~~~ 286 (288)
T 1oi7_A 259 ESKLRAFAEAGIPVADTIDEIVELVKKA 286 (288)
T ss_dssp HHHHHHHHHHTCCBCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeCCHHHHHHHHHHH
Confidence 0 122356788999998888764
No 88
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=33.32 E-value=92 Score=26.86 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=29.8
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
..|+|||+= |.=||+|-..++++. +...+|||||.+.
T Consensus 168 ~~DG~VItH-GTDTMeeTA~~Lsl~-l~~~~KPVVlTGA 204 (438)
T 1zq1_A 168 GDYGVVVAH-GTDTMGYTAAALSFM-LRNLGKPVVLVGA 204 (438)
T ss_dssp TCSEEEEEC-CSSSHHHHHHHHHHH-EESCCSCEEEECC
T ss_pred CCCeEEEec-CchhHHHHHHHHHHH-HhCCCCCEEEeCC
Confidence 679999985 589999999999874 3345899999764
No 89
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=33.23 E-value=41 Score=24.96 Aligned_cols=18 Identities=33% Similarity=0.442 Sum_probs=11.0
Q ss_pred HHhCCeEEEccCCCcCHHHH
Q 031213 50 ARNSDCFIALPGGYGTLEEL 69 (164)
Q Consensus 50 ~~~sDafIvlPGG~GTLdEl 69 (164)
++.+|++|+ ||| |+....
T Consensus 38 l~~~D~lil-PG~-g~~~~~ 55 (211)
T 4gud_A 38 VLAADKLFL-PGV-GTASEA 55 (211)
T ss_dssp HHHCSEEEE-CCC-SCHHHH
T ss_pred HhCCCEEEE-CCC-CCHHHH
Confidence 467898665 975 444443
No 90
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=32.97 E-value=1e+02 Score=24.48 Aligned_cols=83 Identities=17% Similarity=0.264 Sum_probs=48.8
Q ss_pred eecCCH--HHHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCC--
Q 031213 37 KPVADM--HQRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFI-- 110 (164)
Q Consensus 37 ~i~~~m--~~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi-- 110 (164)
+...+. .+....++..||+||.-. .|+|. =+.|+++. .+|+|..+..| +.+ ++.++.-
T Consensus 256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~--~~lEAma~------G~PvI~s~~~g----~~e----~v~~~~~~~ 319 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGL--CSAEGAVL------GKPLIISAVGG----ADD----YFSGDCVYK 319 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCH--HHHHHHTT------TCCEEEECCHH----HHH----HSCTTTSEE
T ss_pred eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCc--HHHHHHHc------CCCEEEcCCCC----hHH----HHccCcccc
Confidence 434444 456667899999887632 34443 36777753 89999987542 222 2222110
Q ss_pred -Cc-------cccCC--eEEcCCHHHHHHHHHhhcC
Q 031213 111 -SP-------SQRSI--LVSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 111 -~~-------~~~~~--i~~~~~~ee~~~~l~~~~~ 136 (164)
+. ..... ++-..|++++.+.| +...
T Consensus 320 i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~ 354 (413)
T 3oy2_A 320 IKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK 354 (413)
T ss_dssp ECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT
T ss_pred cccccccccccccCcceeeCCCCHHHHHHHH-HHhc
Confidence 00 00134 66678999999999 7654
No 91
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=32.42 E-value=50 Score=22.96 Aligned_cols=72 Identities=21% Similarity=0.228 Sum_probs=41.9
Q ss_pred HHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCCcccc--CCeEEcCCHHHH
Q 031213 50 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQR--SILVSAPNAKEL 127 (164)
Q Consensus 50 ~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~~~~~--~~i~~~~~~ee~ 127 (164)
++.||++|+|.|=.-+-.+-. -+....-....||++.+...|-- -++.... ..-.+.-+.+.+
T Consensus 36 I~~~~~vIvL~G~~t~~s~wv-~~EI~~A~~~gkpIigV~~~g~~--------------~~P~~l~~~a~~iV~Wn~~~I 100 (111)
T 1eiw_A 36 PEDADAVIVLAGLWGTRRDEI-LGAVDLARKSSKPIITVRPYGLE--------------NVPPELEAVSSEVVGWNPHCI 100 (111)
T ss_dssp SSSCSEEEEEGGGTTTSHHHH-HHHHHHHTTTTCCEEEECCSSSS--------------CCCTTHHHHCSEEECSCHHHH
T ss_pred cccCCEEEEEeCCCcCCChHH-HHHHHHHHHcCCCEEEEEcCCCC--------------cCCHHHHhhCceeccCCHHHH
Confidence 567999999998776433311 11111112468999999875521 1111111 223566778888
Q ss_pred HHHHHhhcC
Q 031213 128 VQKLEEYVP 136 (164)
Q Consensus 128 ~~~l~~~~~ 136 (164)
.+.|.+...
T Consensus 101 ~~aI~~~~~ 109 (111)
T 1eiw_A 101 RDALEDALD 109 (111)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHhccC
Confidence 888877643
No 92
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=32.10 E-value=1.4e+02 Score=23.74 Aligned_cols=81 Identities=10% Similarity=0.008 Sum_probs=45.7
Q ss_pred CHHHHHHHHHH--hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchH----------H-------HHHH
Q 031213 41 DMHQRKAEMAR--NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNS----------L-------LNFI 101 (164)
Q Consensus 41 ~m~~Rk~~m~~--~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~----------l-------~~~l 101 (164)
++.+=.+.|.+ ..++++..--++|+.+|....+--. ..+||||.+.. |-..+ + .+..
T Consensus 186 ~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~-G~~~~~g~~~~Htga~~~~~~g~~~~~ 261 (288)
T 2nu8_A 186 NFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE---HVTKPVVGYIA-GVTAPKGKRMGHAGAIIAGGKGTADEK 261 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH---HCCSCEEEEEE-CTTCCTTCCCSSTTCCCCTTCCCHHHH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEe-CCCCcccccccchhhhhccCCccHHHH
Confidence 34444444443 4556777777778887765444222 34899998864 32221 0 0001
Q ss_pred H-HHHHcCCCCccccCCeEEcCCHHHHHHHHHhh
Q 031213 102 D-KAVDDGFISPSQRSILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 102 ~-~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~ 134 (164)
+ .+.+. -+..++|++|+++.+++.
T Consensus 262 ~aa~~~a---------Gv~~~~~~~el~~~~~~~ 286 (288)
T 2nu8_A 262 FAALEAA---------GVKTVRSLADIGEALKTV 286 (288)
T ss_dssp HHHHHHT---------TCEECSSGGGHHHHHHHH
T ss_pred HHHHHHC---------CCeEeCCHHHHHHHHHHH
Confidence 1 12222 367888999998888764
No 93
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=31.91 E-value=70 Score=27.31 Aligned_cols=83 Identities=14% Similarity=0.204 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHhCC-eEEEccCCCcCHHHHHHHHHHHHcCC-CCccEEEE---ecCccchHHHHHHHH---HHHcCCC-C
Q 031213 41 DMHQRKAEMARNSD-CFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLI---NVDGYYNSLLNFIDK---AVDDGFI-S 111 (164)
Q Consensus 41 ~m~~Rk~~m~~~sD-afIvlPGG~GTLdEl~e~~t~~qlg~-~~kPivll---n~~gfw~~l~~~l~~---~~~egfi-~ 111 (164)
...++=...++... |+|.|-||.|| ++|. .+|+++=+ +..-|.+-..+.|.. +..+-+- .
T Consensus 22 ~~~~~Gl~~i~~gkvavvlLAGG~GT-----------RLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~ 90 (405)
T 3oc9_A 22 EHYYRGLELISQGKTALITPAGGQGS-----------RLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQK 90 (405)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSBCT-----------TTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhcCceEEEEecCCCcc-----------cccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhcccc
Confidence 34444444455444 48899999999 3353 46776655 333366655555433 2221000 0
Q ss_pred ccccC--CeEEcCCHHHHHHHHHhh
Q 031213 112 PSQRS--ILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 112 ~~~~~--~i~~~~~~ee~~~~l~~~ 134 (164)
..... ++..-.+.+++.+++++.
T Consensus 91 ~~~Ip~~IMtS~~t~e~t~~~f~~~ 115 (405)
T 3oc9_A 91 NVMIHWFLMTNEETIEEINNYFKEH 115 (405)
T ss_dssp CCCCEEEEEECTTTHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCccHHHHHHHHHhC
Confidence 11111 234455678888888763
No 94
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=31.64 E-value=1.1e+02 Score=24.09 Aligned_cols=80 Identities=23% Similarity=0.269 Sum_probs=47.8
Q ss_pred eEeecCCH--HHHHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCC
Q 031213 35 EVKPVADM--HQRKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFI 110 (164)
Q Consensus 35 el~i~~~m--~~Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi 110 (164)
+.+++..+ .+....++..||++|... .|+|. =++|++.. .+|+|..+..| +.+. ++
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~--~~~EAma~------G~Pvi~s~~~~----~~e~----~~---- 370 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL--VALEAMCL------GAIPIASAVGG----LRDI----IT---- 370 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCH--HHHHHHHT------TCEEEEESSTH----HHHH----CC----
T ss_pred CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccH--HHHHHHHC------CCCeEEcCCCC----ccee----EE----
Confidence 33444442 344556788899877542 45554 37777765 89999887642 2222 11
Q ss_pred CccccCCeEEcCCHHHHHHHHHhhcC
Q 031213 111 SPSQRSILVSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 111 ~~~~~~~i~~~~~~ee~~~~l~~~~~ 136 (164)
. ....++-.+|++++.+.|.+...
T Consensus 371 -~-~~g~~~~~~d~~~la~~i~~ll~ 394 (439)
T 3fro_A 371 -N-ETGILVKAGDPGELANAILKALE 394 (439)
T ss_dssp -T-TTCEEECTTCHHHHHHHHHHHHH
T ss_pred -c-CceEEeCCCCHHHHHHHHHHHHh
Confidence 1 12233444689999998886543
No 95
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=31.21 E-value=1.6e+02 Score=22.62 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=27.2
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccc
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 94 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw 94 (164)
...+.|+|+|| .|...+++.+.- ....=+-+.+++.+.||
T Consensus 44 ~~~~~l~LsgG-sTp~~ly~~L~~--~~i~w~~v~~f~~DEr~ 83 (232)
T 1vl1_A 44 KDKIFVVLAGG-RTPLPVYEKLAE--QKFPWNRIHFFLSDERY 83 (232)
T ss_dssp CSCEEEEECCS-TTHHHHHHHHTT--SCCCGGGEEEEESEEES
T ss_pred CCCeEEEEcCC-ccHHHHHHHHHH--cCCChhHEEEEeCeEee
Confidence 45789999988 788888887752 12212456667776676
No 96
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=30.75 E-value=69 Score=24.65 Aligned_cols=62 Identities=18% Similarity=0.229 Sum_probs=38.3
Q ss_pred eEEEccCCCcCHHHHHHHHHHHHc-CCCCccEEEEecCccchHHHHH-HHHHHHcCCCCccccCCeEEcC--CHHHHHHH
Q 031213 55 CFIALPGGYGTLEELLEVITWAQL-GIHDKPVGLINVDGYYNSLLNF-IDKAVDDGFISPSQRSILVSAP--NAKELVQK 130 (164)
Q Consensus 55 afIvlPGG~GTLdEl~e~~t~~ql-g~~~kPivlln~~gfw~~l~~~-l~~~~~egfi~~~~~~~i~~~~--~~ee~~~~ 130 (164)
..|+|.||.||= + .-+ ...+||++-++ | .+++++ ++.+...|+ .+.+++++ ..+++.++
T Consensus 26 ~aiIlAaG~g~R--l------~~lt~~~pK~ll~i~--g--~pli~~~l~~l~~~g~-----~~iivv~~~~~~~~~~~~ 88 (269)
T 4ecm_A 26 KGIILAGGTGSR--L------YPITKVTNKHLLPVG--R--YPMIYHAVYKLKQCDI-----TDIMIITGKEHMGDVVSF 88 (269)
T ss_dssp EEEEECCSCCGG--G------TTTTSSSCGGGSEET--T--EEHHHHHHHHHHHTTC-----CEEEEEECTTTHHHHHHH
T ss_pred EEEEECCCCccc--c------ccccCCCCceecEEC--C--EEHHHHHHHHHHHCCC-----CEEEEECChhhHHHHHHH
Confidence 478899999991 1 111 13468887775 3 567775 466776652 34556666 46777777
Q ss_pred HHh
Q 031213 131 LEE 133 (164)
Q Consensus 131 l~~ 133 (164)
+.+
T Consensus 89 ~~~ 91 (269)
T 4ecm_A 89 LGS 91 (269)
T ss_dssp HTT
T ss_pred Hhh
Confidence 653
No 97
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=29.99 E-value=1e+02 Score=22.78 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=24.7
Q ss_pred HHHh-CCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 49 MARN-SDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 49 m~~~-sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+... .|++|+.|-.....++..+.+.. ...|+|+++.
T Consensus 55 ~~~~~vdgii~~~~~~~~~~~~~~~~~~-----~~ipvV~~~~ 92 (276)
T 3ksm_A 55 LSQAPPDALILAPNSAEDLTPSVAQYRA-----RNIPVLVVDS 92 (276)
T ss_dssp HHHSCCSEEEECCSSTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHhCCCCEEEEeCCCHHHHHHHHHHHHH-----CCCcEEEEec
Confidence 3445 89999999766556666655432 3678888764
No 98
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=29.14 E-value=70 Score=24.69 Aligned_cols=43 Identities=14% Similarity=0.269 Sum_probs=31.2
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccc
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 94 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw 94 (164)
+.++..+.|+|+|| .|...+++.+.- -+..=+-+.+++.+.||
T Consensus 29 i~~~~~~~l~LsgG-stp~~~y~~L~~--~~idw~~v~~f~~DEr~ 71 (226)
T 3lwd_A 29 LAKRERALLVVSGG-STPKPFFTSLAA--KALPWARVDVTLADERW 71 (226)
T ss_dssp HTTSSCEEEEECCS-STTHHHHHHHHT--SCSCGGGEEEEESEEES
T ss_pred HHhCCCEEEEEcCC-CCHHHHHHHHHh--cCCCchhEEEEEeeecc
Confidence 34567899999999 588899888863 22222567788887787
No 99
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=27.87 E-value=2e+02 Score=21.76 Aligned_cols=55 Identities=24% Similarity=0.254 Sum_probs=40.4
Q ss_pred CHHHHHHHHH-----HhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec-CccchHHHHHHH
Q 031213 41 DMHQRKAEMA-----RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV-DGYYNSLLNFID 102 (164)
Q Consensus 41 ~m~~Rk~~m~-----~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~-~gfw~~l~~~l~ 102 (164)
-..+|...+. +..++||+..|+-+-|-=+.-.+| .+|+|=+-. .++++++-.+|.
T Consensus 46 R~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t-------~~PVIgVP~~~~~l~G~daLlS 106 (174)
T 3lp6_A 46 RTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAAT-------PLPVIGVPVPLGRLDGLDSLLS 106 (174)
T ss_dssp TCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHHHC-------SSCEEEEEECCSSGGGHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHHHhcc-------CCCEEEeeCCCCCCCCHHHHHH
Confidence 3355665554 457899999999999988887765 799986654 378877766654
No 100
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=27.72 E-value=53 Score=22.75 Aligned_cols=57 Identities=21% Similarity=0.233 Sum_probs=35.7
Q ss_pred HHcCCCCccEEEEecCccchHHHHHHHH-HHHcCCCCccccCCeEEcCCHHHHHHHHHhh
Q 031213 76 AQLGIHDKPVGLINVDGYYNSLLNFIDK-AVDDGFISPSQRSILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 76 ~qlg~~~kPivlln~~gfw~~l~~~l~~-~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~ 134 (164)
..++.+-+|++.++.+|--+.+++.++. +-....|.=+.... ..+|.+++.+.|++.
T Consensus 11 R~~ah~Lkpvv~IGK~GlTe~vi~ei~~aL~~hELIKVkvl~~--~~~d~~e~a~~la~~ 68 (104)
T 1rq8_A 11 RSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQN--NFDDKKELAETLSEA 68 (104)
T ss_dssp HHHTTSSCCSCEECSSSCCHHHHHHHHHHHHHSSEEEEEECCC--CHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCcEEEEEeCC--CHHHHHHHHHHHHHH
Confidence 3444556899999999999999999875 54443332221110 123456667777653
No 101
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=27.11 E-value=51 Score=24.95 Aligned_cols=81 Identities=12% Similarity=0.038 Sum_probs=49.7
Q ss_pred HHhCCeEEEccCCCcCHHHHHHHHH-------HHHcCCCCccEEEEecCccchH--HHHHHHHHHHcCCC--CccccCCe
Q 031213 50 ARNSDCFIALPGGYGTLEELLEVIT-------WAQLGIHDKPVGLINVDGYYNS--LLNFIDKAVDDGFI--SPSQRSIL 118 (164)
Q Consensus 50 ~~~sDafIvlPGG~GTLdEl~e~~t-------~~qlg~~~kPivlln~~gfw~~--l~~~l~~~~~egfi--~~~~~~~i 118 (164)
...+|++|+.|-..+|+.-+..=++ +...-..++|++++-.+ .|.. .++.+..+.+.|+. ++. ...+
T Consensus 79 ~~~aD~mvIaPaTanTlAkiA~GiaDnLlt~~a~~~lk~~~plvl~Pa~-m~~~~~~~~N~~~L~~~G~~ivpp~-~g~~ 156 (189)
T 2ejb_A 79 LVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVRE-APYNEIHLENMLKITRMGGVVVPAS-PAFY 156 (189)
T ss_dssp HTTEEEEEEEEECHHHHHHHHHTCCSSHHHHHHHHHHHHTCCEEEEECC-SSCCHHHHHHHHHHHHTTCEEEECC-CCST
T ss_pred ccccCEEEEecCCHHHHHHHHcCcCCcHHHHHHHHHccCCCcEEEEECC-CCCCHHHHHHHHHHHHCCeEEeCCC-hHHh
Confidence 4679999999999999887764221 11111127899988654 4543 33456667676742 222 2223
Q ss_pred EEcCCHHHHHHHHH
Q 031213 119 VSAPNAKELVQKLE 132 (164)
Q Consensus 119 ~~~~~~ee~~~~l~ 132 (164)
.-..+.+++++++.
T Consensus 157 ~~p~si~div~~~v 170 (189)
T 2ejb_A 157 HKPQSIDDMINFVV 170 (189)
T ss_dssp TCCCSHHHHHHHHH
T ss_pred hCCCCHHHHHHHHH
Confidence 34567888887764
No 102
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=26.87 E-value=92 Score=23.17 Aligned_cols=57 Identities=14% Similarity=0.222 Sum_probs=35.0
Q ss_pred eEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHH-HHHHHHcCCCCccccCCeEEcCCHHHHHHHHHh
Q 031213 55 CFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNF-IDKAVDDGFISPSQRSILVSAPNAKELVQKLEE 133 (164)
Q Consensus 55 afIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~-l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~ 133 (164)
..|++.||.|| +++ +||+.-++ | .+++++ ++.+...|.+ .+.++++++ +++.+.+.+
T Consensus 4 ~aiIlA~G~~~-----------R~~--~K~l~~i~--g--~pli~~~i~~~~~~~~~----~~ivvv~~~-~~i~~~~~~ 61 (245)
T 1h7e_A 4 VIVIPARYGSS-----------RLP--GKPLLDIV--G--KPMIQHVYERALQVAGV----AEVWVATDD-PRVEQAVQA 61 (245)
T ss_dssp EEEEECCSCCS-----------SST--TGGGCEET--T--EEHHHHHHHHHHTCTTC----CEEEEEESC-HHHHHHHHH
T ss_pred EEEEEcCCcCC-----------CCC--CCcccccC--C--chHHHHHHHHHHhCCCC----CeEEEECCc-HHHHHHHHH
Confidence 35888999998 222 78887765 3 466665 4556555433 244555555 666666654
No 103
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=26.12 E-value=1.2e+02 Score=22.74 Aligned_cols=38 Identities=13% Similarity=-0.044 Sum_probs=25.7
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+.-...|++|+.|...-...+..+.+.. .+.|+|+++.
T Consensus 60 l~~~~vdgiI~~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 97 (293)
T 3l6u_A 60 FVHLKVDAIFITTLDDVYIGSAIEEAKK-----AGIPVFAIDR 97 (293)
T ss_dssp HHHTTCSEEEEECSCTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHHcCCCEEEEecCChHHHHHHHHHHHH-----cCCCEEEecC
Confidence 3445789999998766665566554432 3678888764
No 104
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=25.99 E-value=32 Score=26.61 Aligned_cols=87 Identities=13% Similarity=0.127 Sum_probs=52.7
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHH-----cCC-CCccEEEEec--CccchH--HHHHHHHHHHcCC--CCccccC
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQ-----LGI-HDKPVGLINV--DGYYNS--LLNFIDKAVDDGF--ISPSQRS 116 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~q-----lg~-~~kPivlln~--~gfw~~--l~~~l~~~~~egf--i~~~~~~ 116 (164)
+.+.+|++||.|-..+|+.-+..=++-+- ... .++|+++.-. ...|+. ....|++|.+.|+ +++....
T Consensus 93 l~~~aD~mvIaPaTanTlAKiA~GiaDnLlt~~~~A~d~~~pvvlaPaMN~~M~e~P~t~~nl~~L~~~G~~ivpP~~g~ 172 (209)
T 1mvl_A 93 LRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKR 172 (209)
T ss_dssp HHHHCSEEEEEEECHHHHHHHHHTCCSSHHHHHHHTCCTTSCEEEEECCCHHHHHSHHHHHHHHHHHHHTCEECCCBC--
T ss_pred hcccCCEEEEecCCHHHHHHHHccccCcHHHHHHHHhcCCCCEEEEECCChhHhhChhHHHHHHHHHHCCCEEeCCcccc
Confidence 34679999999999999887764322111 111 2689998743 246653 3345677877774 3443321
Q ss_pred Ce------EEcCCHHHHHHHHHhhc
Q 031213 117 IL------VSAPNAKELVQKLEEYV 135 (164)
Q Consensus 117 ~i------~~~~~~ee~~~~l~~~~ 135 (164)
.- --..+++++++.+.+..
T Consensus 173 lacg~~G~gr~~~~~~Iv~~v~~~l 197 (209)
T 1mvl_A 173 LASGDYGNGAMAEPSLIYSTVRLFW 197 (209)
T ss_dssp -------CCBCCCHHHHHHHHHHHH
T ss_pred ccCCCcCCCCCCCHHHHHHHHHHHh
Confidence 11 12457999999887653
No 105
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=25.94 E-value=1.3e+02 Score=22.80 Aligned_cols=38 Identities=13% Similarity=0.075 Sum_probs=25.7
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+.-...|++|+.|......++..+.+.. ...|+|+++.
T Consensus 57 l~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 94 (305)
T 3g1w_A 57 AIAKNPAGIAISAIDPVELTDTINKAVD-----AGIPIVLFDS 94 (305)
T ss_dssp HHHHCCSEEEECCSSTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHHhCCCEEEEcCCCHHHHHHHHHHHHH-----CCCcEEEECC
Confidence 3446799999999776655665544432 3678888774
No 106
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=25.61 E-value=16 Score=31.64 Aligned_cols=15 Identities=7% Similarity=0.169 Sum_probs=12.6
Q ss_pred HhCCeEEEccCCCcC
Q 031213 51 RNSDCFIALPGGYGT 65 (164)
Q Consensus 51 ~~sDafIvlPGG~GT 65 (164)
..=.|+||++||+||
T Consensus 397 ~~~~~~vVC~~Gigt 411 (485)
T 3sqn_A 397 QTMTAYFLFQGEPAW 411 (485)
T ss_dssp CSEEEEEECCSCHHH
T ss_pred ccceEEEECCCchhH
Confidence 344689999999999
No 107
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=25.48 E-value=81 Score=25.08 Aligned_cols=42 Identities=24% Similarity=0.506 Sum_probs=27.6
Q ss_pred cCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHH-----HHHHHHHcC
Q 031213 60 PGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLN-----FIDKAVDDG 108 (164)
Q Consensus 60 PGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~-----~l~~~~~eg 108 (164)
-.|+ |++.+|+.+.- +.. ..|++++ +||+++.. |++.+.+.|
T Consensus 70 ~~g~-~~~~~~~~~~~--~r~-~~Pivlm---~Y~N~i~~~G~e~F~~~~~~aG 116 (252)
T 3tha_A 70 DQGV-DIHSVFELLAR--IKT-KKALVFM---VYYNLIFSYGLEKFVKKAKSLG 116 (252)
T ss_dssp HTTC-CHHHHHHHHHH--CCC-SSEEEEE---CCHHHHHHHCHHHHHHHHHHTT
T ss_pred HCCC-CHHHHHHHHHH--Hhc-CCCEEEE---eccCHHHHhhHHHHHHHHHHcC
Confidence 3443 77888887643 322 2799988 59998655 556666655
No 108
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=25.30 E-value=2.7e+02 Score=22.57 Aligned_cols=17 Identities=18% Similarity=0.235 Sum_probs=13.3
Q ss_pred HHHHhcCCEEEEEeCCC
Q 031213 6 HVVHRGGGHVLGIIPKT 22 (164)
Q Consensus 6 ~ga~~~GG~viGIiP~~ 22 (164)
-++.+-||+++.+-|..
T Consensus 56 ~A~~~LGg~~i~l~~~~ 72 (307)
T 3tpf_A 56 LAITELGGKALFLSSND 72 (307)
T ss_dssp HHHHHTTCEEEEECTTT
T ss_pred HHHHHcCCeEEEcCccc
Confidence 46788999999986653
No 109
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=25.19 E-value=91 Score=23.38 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=25.1
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+.-...|++|+.|......++..+.+.. .+.|+|+++.
T Consensus 57 l~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 94 (291)
T 3l49_A 57 LIAQKPDAIIEQLGNLDVLNPWLQKIND-----AGIPLFTVDT 94 (291)
T ss_dssp HHHHCCSEEEEESSCHHHHHHHHHHHHH-----TTCCEEEESC
T ss_pred HHHcCCCEEEEeCCChhhhHHHHHHHHH-----CCCcEEEecC
Confidence 4456799999998765455555544432 3678888875
No 110
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=24.39 E-value=2.9e+02 Score=22.61 Aligned_cols=83 Identities=11% Similarity=0.111 Sum_probs=42.4
Q ss_pred HHHHhcCCEEEEEeCCCc-ccc-cc------cCCccceEeecCCH-HHHHHHHHHhCCeEEEccCCCcC---HHHHHHHH
Q 031213 6 HVVHRGGGHVLGIIPKTL-MNK-EI------TGETVGEVKPVADM-HQRKAEMARNSDCFIALPGGYGT---LEELLEVI 73 (164)
Q Consensus 6 ~ga~~~GG~viGIiP~~~-~~~-e~------~~~~~~el~i~~~m-~~Rk~~m~~~sDafIvlPGG~GT---LdEl~e~~ 73 (164)
-++.+-||+++.+-|... ..+ |. .-..+.|.++..+. +..-..+.+.|+.=|+=.|. .. .+-+..++
T Consensus 68 ~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINag~-~~~HPtQaLaDl~ 146 (323)
T 3gd5_A 68 VAMYQLGGQVIDLSPSNTQVGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIPVINALT-DHEHPCQVVADLL 146 (323)
T ss_dssp HHHHHTTCEEEEC----------CCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHCSCEEEEEC-SSCCHHHHHHHHH
T ss_pred HHHHHcCCeEEEeCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCC-CCCCcHHHHHHHH
Confidence 467889999999855432 111 10 01233456655444 55556666777654433332 21 45566677
Q ss_pred HHHHc-CC-CCccEEEEe
Q 031213 74 TWAQL-GI-HDKPVGLIN 89 (164)
Q Consensus 74 t~~ql-g~-~~kPivlln 89 (164)
|+.+. |. ..+.|.+++
T Consensus 147 Ti~e~~g~l~glkva~vG 164 (323)
T 3gd5_A 147 TIRENFGRLAGLKLAYVG 164 (323)
T ss_dssp HHHHHHSCCTTCEEEEES
T ss_pred HHHHHhCCCCCCEEEEEC
Confidence 76655 43 455666664
No 111
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=24.32 E-value=58 Score=27.21 Aligned_cols=42 Identities=17% Similarity=0.290 Sum_probs=34.9
Q ss_pred cchHHHHHHHHHHHcCCCCccccC---CeEEcCCHHHHHHHHHhh
Q 031213 93 YYNSLLNFIDKAVDDGFISPSQRS---ILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 93 fw~~l~~~l~~~~~egfi~~~~~~---~i~~~~~~ee~~~~l~~~ 134 (164)
.|+.+.+-++.|+.+|.++++..+ ...+..+++|+-+.+++.
T Consensus 225 ~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~ 269 (359)
T 1m6e_X 225 IWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKE 269 (359)
T ss_dssp TTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHc
Confidence 688888888999999999997554 457788999999999864
No 112
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=23.98 E-value=74 Score=23.54 Aligned_cols=58 Identities=22% Similarity=0.294 Sum_probs=33.9
Q ss_pred eEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHH-HHHHHHcCCCCccccCCeEEcCCHHHHHHHHHh
Q 031213 55 CFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNF-IDKAVDDGFISPSQRSILVSAPNAKELVQKLEE 133 (164)
Q Consensus 55 afIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~-l~~~~~egfi~~~~~~~i~~~~~~ee~~~~l~~ 133 (164)
..|++.||.|| +++ +||+.-++ | .+++++ ++.+...+.+ .+.+++++ .+++.+++++
T Consensus 6 ~aiIlA~G~g~-----------R~~--~K~l~~i~--g--kpll~~~l~~~~~~~~~----~~ivvv~~-~~~i~~~~~~ 63 (228)
T 1ezi_A 6 IAVILARQNSK-----------GLP--LKNLRKMN--G--ISLLGHTINAAISSKCF----DRIIVSTD-GGLIAEEAKN 63 (228)
T ss_dssp EEEEECCSSCS-----------SST--TTTTCEET--T--EEHHHHHHHHHHHHCCC----SEEEEEES-CHHHHHHHHH
T ss_pred EEEEecCCCCC-----------CCC--CcccceeC--C--cCHHHHHHHHHHhCCCC----CEEEEECC-CHHHHHHHHH
Confidence 36889999998 222 78888776 3 466665 4555554432 23444444 4555555554
Q ss_pred h
Q 031213 134 Y 134 (164)
Q Consensus 134 ~ 134 (164)
+
T Consensus 64 ~ 64 (228)
T 1ezi_A 64 F 64 (228)
T ss_dssp T
T ss_pred c
Confidence 3
No 113
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=23.87 E-value=52 Score=26.69 Aligned_cols=25 Identities=12% Similarity=0.203 Sum_probs=11.2
Q ss_pred HHhCCeEEEccCCCcCHHHHHHHHH
Q 031213 50 ARNSDCFIALPGGYGTLEELLEVIT 74 (164)
Q Consensus 50 ~~~sDafIvlPGG~GTLdEl~e~~t 74 (164)
.+..+.-|+.-||++|.+....++.
T Consensus 183 ~e~~~vPVI~eGGI~TPsDAa~Ame 207 (265)
T 1wv2_A 183 LEEAKVPVLVDAGVGTASDAAIAME 207 (265)
T ss_dssp HHHCSSCBEEESCCCSHHHHHHHHH
T ss_pred HhcCCCCEEEeCCCCCHHHHHHHHH
Confidence 3334444444444444444444443
No 114
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=23.70 E-value=1.2e+02 Score=22.81 Aligned_cols=38 Identities=11% Similarity=-0.055 Sum_probs=25.5
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
++-...|++|+.|-......+..+.+. ....|+|+++.
T Consensus 53 l~~~~vdgiii~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (306)
T 8abp_A 53 LAASGAKGFVICTPDPKLGSAIVAKAR-----GYDMKVIAVDD 90 (306)
T ss_dssp HHHTTCCEEEEECSCGGGHHHHHHHHH-----HTTCEEEEESS
T ss_pred HHHcCCCEEEEeCCCchhhHHHHHHHH-----HCCCcEEEeCC
Confidence 344668999999977665555444332 23689998883
No 115
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=23.33 E-value=53 Score=22.40 Aligned_cols=55 Identities=13% Similarity=0.186 Sum_probs=35.0
Q ss_pred CCCCccEEEEecCccchHHHHHHHH-HHHcCCCCccccCCeEEcCCHHHHHHHHHhhc
Q 031213 79 GIHDKPVGLINVDGYYNSLLNFIDK-AVDDGFISPSQRSILVSAPNAKELVQKLEEYV 135 (164)
Q Consensus 79 g~~~kPivlln~~gfw~~l~~~l~~-~~~egfi~~~~~~~i~~~~~~ee~~~~l~~~~ 135 (164)
+.+-+|++.++.+|--+.+++.++. +-....|.=+.... ..+|.+++.+.|++..
T Consensus 15 ah~l~pvv~IGk~GlT~~vi~ei~~aL~~~ELIKVkvl~~--~~~~~~e~a~~la~~t 70 (98)
T 1jo0_A 15 AHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGA--DRETKQLIINAIVRET 70 (98)
T ss_dssp HTTBCCSEEECTTCSCHHHHHHHHHHHHHHSEEEEEETTC--CHHHHHHHHHHHHHHH
T ss_pred hcCCCCeEEECCCCCCHHHHHHHHHHHHHCCeEEEEEeCC--CHHHHHHHHHHHHHHh
Confidence 3456899999999999999999875 44443332222111 1245567777776643
No 116
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=23.15 E-value=1.2e+02 Score=23.09 Aligned_cols=38 Identities=13% Similarity=0.139 Sum_probs=26.8
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
++-...|++|+.|.....+.+..+.+. ....|+|+++.
T Consensus 54 l~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 91 (313)
T 3m9w_A 54 MINRGVDVLVIIPYNGQVLSNVVKEAK-----QEGIKVLAYDR 91 (313)
T ss_dssp HHHTTCSEEEEECSSTTSCHHHHHHHH-----TTTCEEEEESS
T ss_pred HHHcCCCEEEEeCCChhhhHHHHHHHH-----HCCCeEEEECC
Confidence 344679999999987777666665543 23678888875
No 117
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=23.09 E-value=1.5e+02 Score=22.46 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=26.8
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
++....|++|+.|-....+++..+.+.- ...|+|+++.
T Consensus 57 l~~~~vdgiii~~~~~~~~~~~~~~~~~-----~giPvV~~~~ 94 (297)
T 3rot_A 57 ALATYPSGIATTIPSDTAFSKSLQRANK-----LNIPVIAVDT 94 (297)
T ss_dssp HHHTCCSEEEECCCCSSTTHHHHHHHHH-----HTCCEEEESC
T ss_pred HHHcCCCEEEEeCCCHHHHHHHHHHHHH-----CCCCEEEEcC
Confidence 3456789999999887777776655432 2678888764
No 118
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=22.96 E-value=1.2e+02 Score=22.82 Aligned_cols=38 Identities=11% Similarity=0.055 Sum_probs=25.1
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+.....|++|+.|.......+..+.+.. .+.|+|+++.
T Consensus 65 l~~~~vdgiii~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 102 (304)
T 3gbv_A 65 VIEEQPDGVMFAPTVPQYTKGFTDALNE-----LGIPYIYIDS 102 (304)
T ss_dssp HHTTCCSEEEECCSSGGGTHHHHHHHHH-----HTCCEEEESS
T ss_pred HHhcCCCEEEECCCChHHHHHHHHHHHH-----CCCeEEEEeC
Confidence 3456789999998766555555554432 2578888764
No 119
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=22.93 E-value=71 Score=24.39 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=47.6
Q ss_pred HhCCeEEEccCCCcCHHHHHHHHH-------HHHcCCCCccEEEEecCccchH--HHHHHHHHHHcCC--CCccccCCeE
Q 031213 51 RNSDCFIALPGGYGTLEELLEVIT-------WAQLGIHDKPVGLINVDGYYNS--LLNFIDKAVDDGF--ISPSQRSILV 119 (164)
Q Consensus 51 ~~sDafIvlPGG~GTLdEl~e~~t-------~~qlg~~~kPivlln~~gfw~~--l~~~l~~~~~egf--i~~~~~~~i~ 119 (164)
..+|++|+.|-..+|+.-+..=++ +...-..++|+++.-.+ -|.. -++.+..+.+.|+ +++.. ..+.
T Consensus 76 ~~aD~mvIaPaTanTlAkiA~GiaDnLlt~aa~v~L~~~~plvl~Pa~-m~~~~~~~~N~~~L~~~G~~ivpp~~-g~~~ 153 (197)
T 1sbz_A 76 FRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPRE-MPLSTIHLENMLALSRMGVAMVPPMP-AFYN 153 (197)
T ss_dssp SCCSEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHHHHTCEEEEEECC-SSBCHHHHHHHHHHHTTTCEECCCCC-CCTT
T ss_pred cccCEEEEecCCHhHHHHHHccccccHHHHHHHHHHhcCCCEEEEECC-CCCCHHHHHHHHHHHHCCCEEECCCC-cccC
Confidence 378999999999999988763211 10001237899988654 4543 2344666666663 33322 2222
Q ss_pred EcCCHHHHHHHHH
Q 031213 120 SAPNAKELVQKLE 132 (164)
Q Consensus 120 ~~~~~ee~~~~l~ 132 (164)
-..+++++++++.
T Consensus 154 ~p~~i~~~v~~~v 166 (197)
T 1sbz_A 154 HPETVDDIVHHVV 166 (197)
T ss_dssp CCCBHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 2456777777764
No 120
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=22.61 E-value=1.5e+02 Score=24.12 Aligned_cols=75 Identities=19% Similarity=0.169 Sum_probs=42.5
Q ss_pred HHHHHHHhCCeEEEcc--CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcC----CCCccccCCe
Q 031213 45 RKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDG----FISPSQRSIL 118 (164)
Q Consensus 45 Rk~~m~~~sDafIvlP--GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~eg----fi~~~~~~~i 118 (164)
....++..||+||.-- -|+|. =+.|+++. .+|+|..+..| +.+ ++.+| +........+
T Consensus 358 ~~~~~~~~adv~v~pS~~E~~~~--~~lEAma~------G~PvI~s~~gg----~~e----~v~~~~~~~~~~~~~~G~l 421 (485)
T 1rzu_A 358 LSHLMQAGCDAIIIPSRFEPCGL--TQLYALRY------GCIPVVARTGG----LAD----TVIDANHAALASKAATGVQ 421 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCS--HHHHHHHH------TCEEEEESSHH----HHH----HCCBCCHHHHHTTCCCBEE
T ss_pred HHHHHHhcCCEEEECcccCCCCH--HHHHHHHC------CCCEEEeCCCC----hhh----eecccccccccccCCcceE
Confidence 3356788899876532 46665 36777766 89999987632 222 22211 0000012223
Q ss_pred EEcCCHHHHHHHHHhhc
Q 031213 119 VSAPNAKELVQKLEEYV 135 (164)
Q Consensus 119 ~~~~~~ee~~~~l~~~~ 135 (164)
+-..|++++.+.|.+..
T Consensus 422 ~~~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 422 FSPVTLDGLKQAIRRTV 438 (485)
T ss_dssp ESSCSHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHH
Confidence 33458888888887654
No 121
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=22.51 E-value=90 Score=25.59 Aligned_cols=44 Identities=20% Similarity=0.269 Sum_probs=28.3
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcC-CCCccEEEEecCccchH
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYNS 96 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg-~~~kPivlln~~gfw~~ 96 (164)
+..+.|+|+|| .|...+++.+...+-+ ..=+-+.+++.+.||-+
T Consensus 59 ~~~~~l~LsgG-sTP~~ly~~L~~~~~~~idw~~V~~f~~DEr~vp 103 (312)
T 3e15_A 59 GGHVVIGLSGG-KTPIDVYKNIALVKDIKIDTSKLIFFIIDERYKR 103 (312)
T ss_dssp TCCCEEEECCS-HHHHHHHHHHTTCCSSCCCGGGCEEEESEEECCT
T ss_pred CCCEEEEEeCC-CCHHHHHHHHHHhhccCCCccceEEEEeeeecCC
Confidence 36789999999 7888888877621111 11245677777666543
No 122
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=22.29 E-value=35 Score=29.72 Aligned_cols=68 Identities=19% Similarity=0.137 Sum_probs=38.6
Q ss_pred eEEEccCCCcCHHHHHHHHHHHHcCC-CCccEEEEe---cCccchHHHHHHHHHHH---c--CCCCccccCCe--EEcCC
Q 031213 55 CFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLIN---VDGYYNSLLNFIDKAVD---D--GFISPSQRSIL--VSAPN 123 (164)
Q Consensus 55 afIvlPGG~GTLdEl~e~~t~~qlg~-~~kPivlln---~~gfw~~l~~~l~~~~~---e--gfi~~~~~~~i--~~~~~ 123 (164)
++|+|-||.||= +|. .+||++=+. ..-|.+-..+.|..+.. + |.-+......+ ..-.+
T Consensus 105 avvlLaGG~GTR-----------Lg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t 173 (486)
T 2yqc_A 105 AVLLMAGGQGTR-----------LGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPT 173 (486)
T ss_dssp EEEEEEESBCGG-----------GTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGG
T ss_pred EEEEEcCCcccc-----------CCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCC
Confidence 799999999992 354 478876554 33466666665544321 0 21111112222 33445
Q ss_pred HHHHHHHHHh
Q 031213 124 AKELVQKLEE 133 (164)
Q Consensus 124 ~ee~~~~l~~ 133 (164)
.+.+.+++++
T Consensus 174 ~~~t~~~~~~ 183 (486)
T 2yqc_A 174 RNATESFFIE 183 (486)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 7778888876
No 123
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=22.21 E-value=95 Score=24.32 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=26.8
Q ss_pred HHHHHhCCeEEEccCCCc-CHHHHHHHHHHHHcCCCCccEEEEe
Q 031213 47 AEMARNSDCFIALPGGYG-TLEELLEVITWAQLGIHDKPVGLIN 89 (164)
Q Consensus 47 ~~m~~~sDafIvlPGG~G-TLdEl~e~~t~~qlg~~~kPivlln 89 (164)
+.|.+..--+|.+.|+-| |++.+++.+...+ ..+.|++++.
T Consensus 27 ~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir--~~~~Pivl~~ 68 (234)
T 2f6u_A 27 KAVADSGTDAVMISGTQNVTYEKARTLIEKVS--QYGLPIVVEP 68 (234)
T ss_dssp HHHHTTTCSEEEECCCTTCCHHHHHHHHHHHT--TSCCCEEECC
T ss_pred HHHHHcCCCEEEECCCCCCCHHHHHHHHHHhc--CCCCCEEEec
Confidence 455555333667777887 5666888775543 3678999863
No 124
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=22.13 E-value=1.1e+02 Score=24.31 Aligned_cols=44 Identities=32% Similarity=0.456 Sum_probs=27.3
Q ss_pred CCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHH-----HHHHHHHHHcC
Q 031213 61 GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSL-----LNFIDKAVDDG 108 (164)
Q Consensus 61 GG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l-----~~~l~~~~~eg 108 (164)
.| =|++.+++++.-.+-...+.|++++ +||+++ ..|++.+.+.|
T Consensus 75 ~G-~~~~~~~~~v~~ir~~~~~~Pivlm---~Y~npv~~~g~e~f~~~~~~aG 123 (267)
T 3vnd_A 75 AG-TTSSDCFDIITKVRAQHPDMPIGLL---LYANLVFANGIDEFYTKAQAAG 123 (267)
T ss_dssp TT-CCHHHHHHHHHHHHHHCTTCCEEEE---ECHHHHHHHCHHHHHHHHHHHT
T ss_pred cC-CCHHHHHHHHHHHHhcCCCCCEEEE---ecCcHHHHhhHHHHHHHHHHcC
Confidence 44 3566777666543322246799887 599875 44667776666
No 125
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=22.02 E-value=3.9e+02 Score=23.11 Aligned_cols=87 Identities=15% Similarity=0.116 Sum_probs=48.7
Q ss_pred HHHHHHHHH--hCCeEEE--c--cCCCcCH-HHHHHHHHHHHcCC-CCccEEEEe-cCcc---chHHHHHHHHHHHcCCC
Q 031213 43 HQRKAEMAR--NSDCFIA--L--PGGYGTL-EELLEVITWAQLGI-HDKPVGLIN-VDGY---YNSLLNFIDKAVDDGFI 110 (164)
Q Consensus 43 ~~Rk~~m~~--~sDafIv--l--PGG~GTL-dEl~e~~t~~qlg~-~~kPivlln-~~gf---w~~l~~~l~~~~~egfi 110 (164)
...-..+++ ..|++++ + |++.... +++.+++.-.+-.. ..||++++. ..|. -+...+..+.+.+.|
T Consensus 317 ~~al~~~l~D~~vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~~~~~~~~~~~L~~aG-- 394 (480)
T 3dmy_A 317 NQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAG-- 394 (480)
T ss_dssp HHHHHHGGGCTTEEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTSTTCHHHHHHHHHHTT--
T ss_pred HHHHHHHhcCCCCCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccchhhHHHHHHHHHhCC--
Confidence 344444443 3456555 4 6666554 78888775443321 268953332 2222 122323334455544
Q ss_pred CccccCCeEEcCCHHHHHHHHHhhcCCC
Q 031213 111 SPSQRSILVSAPNAKELVQKLEEYVPLH 138 (164)
Q Consensus 111 ~~~~~~~i~~~~~~ee~~~~l~~~~~~~ 138 (164)
+...+++++++..+.......
T Consensus 395 -------Ip~f~spe~Av~a~~~l~~~~ 415 (480)
T 3dmy_A 395 -------IAVVSSLPEATLLAAALIHPL 415 (480)
T ss_dssp -------CEECSSHHHHHHHHHHHTSCC
T ss_pred -------CcccCCHHHHHHHHHHHHhcc
Confidence 788999999999998776443
No 126
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=22.00 E-value=95 Score=20.49 Aligned_cols=13 Identities=0% Similarity=-0.092 Sum_probs=7.1
Q ss_pred CCeEEEccCCCcC
Q 031213 53 SDCFIALPGGYGT 65 (164)
Q Consensus 53 sDafIvlPGG~GT 65 (164)
.|+=+++-|++|-
T Consensus 55 ~gv~~vi~~~iG~ 67 (105)
T 2qtd_A 55 ENVNAIICKNISE 67 (105)
T ss_dssp TCCSEEEESCCCH
T ss_pred CCCCEEEECCCCH
Confidence 4444444566665
No 127
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=21.98 E-value=2.5e+02 Score=22.29 Aligned_cols=86 Identities=14% Similarity=0.054 Sum_probs=41.8
Q ss_pred CHHHHHHHHHH--hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCC-----c-
Q 031213 41 DMHQRKAEMAR--NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFIS-----P- 112 (164)
Q Consensus 41 ~m~~Rk~~m~~--~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~-----~- 112 (164)
++.+=.+.+.+ ..++++..--++|+.++.+ ..+.. ..+||||.+.. |-..+--.. +.-.|-+- .
T Consensus 192 ~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~~--~~~~~--~~~KPVv~~k~-G~~~~~g~~---~sHtgal~~~~~g~~ 263 (294)
T 2yv1_A 192 RYKEVLDLFEKDDETEAIVMIGEIGGGAEEEA--AKFIE--KMKKPVIGYIA-GQSAPEGKR---MGHAGAIVEKGKGTA 263 (294)
T ss_dssp CHHHHHHHHHTCTTCSEEEEEEESSSSHHHHH--HHHHT--TCSSCEEEEEE-CC----------------------CCH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHH--HHHHH--hCCCCEEEEEe-cCCCCcccc---CCchhhhccCCCCCH
Confidence 34444444443 3456666666777776652 22221 25899999865 444411110 11111110 0
Q ss_pred c------ccCCeEEcCCHHHHHHHHHhh
Q 031213 113 S------QRSILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 113 ~------~~~~i~~~~~~ee~~~~l~~~ 134 (164)
. ..--+..+++++|+++.++..
T Consensus 264 ~~~~aa~~~aGv~~~~~~~el~~~~~~~ 291 (294)
T 2yv1_A 264 ESKMKALEEAGAYVAKNISDIPKLLAGI 291 (294)
T ss_dssp HHHHHHHHHHTCEECSSTTHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeCCHHHHHHHHHHH
Confidence 0 122367888999998888764
No 128
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=21.88 E-value=1.5e+02 Score=22.51 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=23.8
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
.-...|++|+.|...-..++..+.+.. ...|+|+++.
T Consensus 55 ~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 91 (306)
T 2vk2_A 55 VAQGVDAIFIAPVVATGWEPVLKEAKD-----AEIPVFLLDR 91 (306)
T ss_dssp HHHTCSEEEECCSSSSSCHHHHHHHHH-----TTCCEEEESS
T ss_pred HHcCCCEEEEeCCChhhHHHHHHHHHH-----CCCCEEEecC
Confidence 346789999998665444555544322 3578888774
No 129
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=21.78 E-value=1.3e+02 Score=24.70 Aligned_cols=75 Identities=15% Similarity=0.068 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCc-cchHHHHHHHHHHHcCCCCccccCCeEEc
Q 031213 43 HQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDG-YYNSLLNFIDKAVDDGFISPSQRSILVSA 121 (164)
Q Consensus 43 ~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~g-fw~~l~~~l~~~~~egfi~~~~~~~i~~~ 121 (164)
.+|-...++.||.+|+++= .++..=........ ..+..|++++|.+. .++ ..--+.+.
T Consensus 197 ~~~a~~~~~~aDllLViGT-SL~V~Paa~l~~~a--~~~G~~vviIN~~~t~~d------------------~~adl~i~ 255 (318)
T 3k35_A 197 LALADEASRNADLSITLGT-SLQIRPSGNLPLAT--KRRGGRLVIVNLQPTKHD------------------RHADLRIH 255 (318)
T ss_dssp HHHHHHHHHTCSEEEEESC-CCCSTTGGGHHHHH--HHTTCEEEEECSSCCTTG------------------GGCSEEEC
T ss_pred HHHHHHHHhcCCEEEEEcc-CCCchhhhhhHHHH--HhcCCEEEEECCCCCCCC------------------CcccEEEe
Confidence 4666777889999888743 33322111111110 12468899999752 111 22336778
Q ss_pred CCHHHHHHHHHhhcCCC
Q 031213 122 PNAKELVQKLEEYVPLH 138 (164)
Q Consensus 122 ~~~ee~~~~l~~~~~~~ 138 (164)
.+.++++..|.+.....
T Consensus 256 g~~~evl~~L~~~Lg~~ 272 (318)
T 3k35_A 256 GYVDEVMTRLMKHLGLE 272 (318)
T ss_dssp SCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHhCCC
Confidence 89999998887654433
No 130
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=21.77 E-value=1.9e+02 Score=20.49 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=26.5
Q ss_pred HHHHHHHhcCCEEEEEeCCCcccccccCCccceEeecCCHHHHHHHHHHhCCeEEEccCCCc
Q 031213 3 LVSHVVHRGGGHVLGIIPKTLMNKEITGETVGEVKPVADMHQRKAEMARNSDCFIALPGGYG 64 (164)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e~~~~~~~el~i~~~m~~Rk~~m~~~sDafIvlPGG~G 64 (164)
.+++.|++.|.++|+|+..... -+.+.||..+.+|.+-.
T Consensus 97 ~~~~~ak~~g~~vi~IT~~~~s-----------------------~l~~~ad~~l~~~~~~~ 135 (186)
T 1m3s_A 97 HTAAKAKSLHGIVAALTINPES-----------------------SIGKQADLIIRMPGSPK 135 (186)
T ss_dssp HHHHHHHHTTCEEEEEESCTTS-----------------------HHHHHCSEEEECSCCSC
T ss_pred HHHHHHHHCCCEEEEEECCCCC-----------------------chHHhCCEEEEeCCccc
Confidence 3567788889999999654321 34567888887776543
No 131
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=21.75 E-value=3e+02 Score=21.80 Aligned_cols=89 Identities=13% Similarity=0.063 Sum_probs=45.3
Q ss_pred CHHHHHHHHHH--hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCCC-----c-
Q 031213 41 DMHQRKAEMAR--NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFIS-----P- 112 (164)
Q Consensus 41 ~m~~Rk~~m~~--~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi~-----~- 112 (164)
++.+=.+.+.+ ..++++..--++|+.+|.+..+.- -...+||||.+.. |-..+--.. +.-.|-+- .
T Consensus 193 ~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~--~~~~~KPVv~~k~-G~s~~~~~~---~sHtgal~~~~~g~~ 266 (297)
T 2yv2_A 193 SFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIK--KGEFTKPVIAYIA-GRTAPPEKR---MGHAGAIIMMGTGTY 266 (297)
T ss_dssp CHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHH--TTSCCSCEEEEES-CCC---------------------CSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHH--hccCCCCEEEEEe-CCCCccccc---cCCccccccCCCCCH
Confidence 44444444443 345666677777777765544322 1234799999865 444421110 11111111 0
Q ss_pred ------cccCCeEEcCCHHHHHHHHHhhc
Q 031213 113 ------SQRSILVSAPNAKELVQKLEEYV 135 (164)
Q Consensus 113 ------~~~~~i~~~~~~ee~~~~l~~~~ 135 (164)
=..--+..++|++|+++.++...
T Consensus 267 ~~~~aa~~~aGv~~v~~~~el~~~~~~~~ 295 (297)
T 2yv2_A 267 EGKVKALREAGVEVAETPFEVPELVRKAL 295 (297)
T ss_dssp HHHHHHHHTTTCEEESSGGGHHHHHHHHC
T ss_pred HHHHHHHHHcCCeEeCCHHHHHHHHHHHh
Confidence 02334678899999998887653
No 132
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=21.44 E-value=1.6e+02 Score=22.51 Aligned_cols=38 Identities=11% Similarity=0.014 Sum_probs=25.7
Q ss_pred HHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 48 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 48 ~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
++....|++|+.|-......+..+.+.. ...|+|+++.
T Consensus 55 ~~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~giPvV~~~~ 92 (330)
T 3uug_A 55 MVTKGVKVLVIASIDGTTLSDVLKQAGE-----QGIKVIAYDR 92 (330)
T ss_dssp HHHHTCSEEEECCSSGGGGHHHHHHHHH-----TTCEEEEESS
T ss_pred HHHcCCCEEEEEcCCchhHHHHHHHHHH-----CCCCEEEECC
Confidence 3456799999998775555665554432 3678888774
No 133
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=21.27 E-value=1.8e+02 Score=21.51 Aligned_cols=93 Identities=13% Similarity=0.173 Sum_probs=57.3
Q ss_pred eEeecCCHHHHHHHHHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHH-HHcCCCCcc
Q 031213 35 EVKPVADMHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKA-VDDGFISPS 113 (164)
Q Consensus 35 el~i~~~m~~Rk~~m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~-~~egfi~~~ 113 (164)
+++++.+-.+....+++..-+++++.||...-+++.....- ...|++.-..+ .+.-.......+ +++ .+.++
T Consensus 122 ~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~-----~~~~~i~t~~d-~~~~~~~~~~~~~v~~-im~~~ 194 (245)
T 3l2b_A 122 DIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK-----NNITVITTPHD-SFTASRLIVQSLPVDY-VMTKD 194 (245)
T ss_dssp CEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH-----HTCEEEECSSC-HHHHHHHGGGGSBHHH-HSBCT
T ss_pred CEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH-----cCCeEEEeCCC-hHHHHHHHhcCCceee-EecCC
Confidence 45666777777788888888899999999999999888763 24566553322 222111100111 222 23223
Q ss_pred ccCCeEEcCCHHHHHHHHHhh
Q 031213 114 QRSILVSAPNAKELVQKLEEY 134 (164)
Q Consensus 114 ~~~~i~~~~~~ee~~~~l~~~ 134 (164)
....+.-.++.+++++.+.+.
T Consensus 195 ~~~~~~~~~~~~~~~~~m~~~ 215 (245)
T 3l2b_A 195 NLVAVSTDDLVEDVKVTMSET 215 (245)
T ss_dssp TCCCEETTSBHHHHHHHHHHH
T ss_pred ccEEECCCCcHHHHHHHHHhc
Confidence 444555567789999999775
No 134
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=21.18 E-value=3.3e+02 Score=22.03 Aligned_cols=87 Identities=18% Similarity=0.232 Sum_probs=45.5
Q ss_pred HHHHhcCCEEEEEeC-CCc-ccc-ccc------CCccceEeecCCH-HHHHHHHHHhCCeEEEccCCCcC----HHHHHH
Q 031213 6 HVVHRGGGHVLGIIP-KTL-MNK-EIT------GETVGEVKPVADM-HQRKAEMARNSDCFIALPGGYGT----LEELLE 71 (164)
Q Consensus 6 ~ga~~~GG~viGIiP-~~~-~~~-e~~------~~~~~el~i~~~m-~~Rk~~m~~~sDafIvlPGG~GT----LdEl~e 71 (164)
-++.+-||+++.+-| ... ..+ |.. -..+.|.++..+. +..-..+.+.|+.= |.-||-|. .+-+..
T Consensus 60 ~A~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vP-VINag~g~~~HPtQ~LaD 138 (306)
T 4ekn_B 60 TAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVP-IINAGDGSNQHPTQTLLD 138 (306)
T ss_dssp HHHHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHHCSEEEEECSSTTHHHHHHHHCSSC-EEESCSSSSCCHHHHHHH
T ss_pred HHHHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHhCcEEEEEcCChHHHHHHHHhCCCC-EEeCCCCCCcCcHHHHHH
Confidence 467889999999966 221 111 110 1123355554443 44455566666643 34555543 456666
Q ss_pred HHHHHHc-CC-CCccEEEEecCccc
Q 031213 72 VITWAQL-GI-HDKPVGLINVDGYY 94 (164)
Q Consensus 72 ~~t~~ql-g~-~~kPivlln~~gfw 94 (164)
++|+... |. ..+.|.+++ ++-|
T Consensus 139 l~Ti~e~~g~l~glkva~vG-D~~~ 162 (306)
T 4ekn_B 139 LYTIMREIGRIDGIKIAFVG-DLKY 162 (306)
T ss_dssp HHHHHHHHSCSTTCEEEEES-CTTT
T ss_pred HHHHHHHhCCcCCCEEEEEc-CCCC
Confidence 6666554 43 345555554 3444
No 135
>2hi6_A UPF0107 protein AF0055; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Archaeoglobus fulgidus} SCOP: c.8.2.3
Probab=21.08 E-value=42 Score=24.64 Aligned_cols=44 Identities=14% Similarity=0.271 Sum_probs=27.5
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHH
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLN 99 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~ 99 (164)
.++-+++||+|.|.-.=-.-++.+.+.|..++=+++-. =++++.
T Consensus 49 iagkILv~P~gkGSt~gS~vl~~l~~~g~aPaAiI~~~----~e~Il~ 92 (141)
T 2hi6_A 49 VAGRILVFPGGKGSTVGSYVLLNLRKNGVAPKAIINKK----TETIIA 92 (141)
T ss_dssp CTTSEEEESCCSCCSSCTTHHHHHHHHTCSCSEEEESS----CCHHHH
T ss_pred ccCeEEEecCCCCccHHHHHHHHHHHCCCCCeEEEecC----cchhhh
Confidence 46889999999998644444455555555555554432 355555
No 136
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=21.03 E-value=1.2e+02 Score=24.22 Aligned_cols=65 Identities=11% Similarity=0.069 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHH-----hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHHHHcCCC
Q 031213 40 ADMHQRKAEMAR-----NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFI 110 (164)
Q Consensus 40 ~~m~~Rk~~m~~-----~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~~~egfi 110 (164)
.+=.+|-+-+.+ ..||++..-||+|+. ++..-+.+..+. ...|-++++ |+++..++..+...+.+
T Consensus 51 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~-rlL~~lD~~~i~-~~~PK~~~G----ySDiTaL~~al~~~~~~ 120 (274)
T 3g23_A 51 GSDALRLSAFLECANDDAFEAVWFVRGGYGAN-RIAEDALARLGR-AASAKQYLG----YSDAGTLLAALYAHRIG 120 (274)
T ss_dssp SCHHHHHHHHHHHHTCTTCSEEEESCCSSCTH-HHHHHHHTTCCG-GGGGCEEEE----CGGGHHHHHHHHHTTCS
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeeccccHH-HHHHhhhhhhhh-hhCCcEEEE----echHHHHHHHHHHhcCc
Confidence 345677666554 458999999999995 455544433221 123555553 45555554445555544
No 137
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=20.81 E-value=1.6e+02 Score=21.99 Aligned_cols=37 Identities=16% Similarity=0.054 Sum_probs=23.2
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
.-...|++|+.|.......+..+.+. ..+.|+|+++.
T Consensus 55 ~~~~vdgiI~~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 91 (290)
T 2fn9_A 55 IAAGYDAIIFNPTDADGSIANVKRAK-----EAGIPVFCVDR 91 (290)
T ss_dssp HHTTCSEEEECCSCTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEecCChHHHHHHHHHHH-----HCCCeEEEEec
Confidence 34568999999876554444443332 13578888874
No 138
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=20.73 E-value=1.2e+02 Score=24.12 Aligned_cols=45 Identities=22% Similarity=0.378 Sum_probs=28.6
Q ss_pred cCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHH-----HHHHHHHHcC
Q 031213 60 PGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLL-----NFIDKAVDDG 108 (164)
Q Consensus 60 PGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~-----~~l~~~~~eg 108 (164)
-.|+ |++.+|+++.-.+-...+.|++++ +||+++. .|++.+.+.|
T Consensus 76 ~~G~-~~~~~~~~v~~~r~~~~~~Pivlm---~Y~n~v~~~g~~~f~~~~~~aG 125 (271)
T 3nav_A 76 AAKT-TPDICFELIAQIRARNPETPIGLL---MYANLVYARGIDDFYQRCQKAG 125 (271)
T ss_dssp HTTC-CHHHHHHHHHHHHHHCTTSCEEEE---ECHHHHHHTCHHHHHHHHHHHT
T ss_pred HcCC-CHHHHHHHHHHHHhcCCCCCEEEE---ecCcHHHHHhHHHHHHHHHHCC
Confidence 3443 677777776543322246799987 5998744 4567776666
No 139
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=20.65 E-value=98 Score=24.05 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=22.1
Q ss_pred hCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 52 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 52 ~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
..| +|+.-||=||+.+.+..+ .. .+|++-+|.
T Consensus 41 ~~D-~vv~~GGDGTll~~a~~~-----~~-~~PilGIn~ 72 (258)
T 1yt5_A 41 TAD-LIVVVGGDGTVLKAAKKA-----AD-GTPMVGFKA 72 (258)
T ss_dssp CCS-EEEEEECHHHHHHHHTTB-----CT-TCEEEEEES
T ss_pred CCC-EEEEEeCcHHHHHHHHHh-----CC-CCCEEEEEC
Confidence 445 556678999998887443 23 788777774
No 140
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=20.62 E-value=1.6e+02 Score=22.65 Aligned_cols=72 Identities=14% Similarity=0.104 Sum_probs=44.2
Q ss_pred HHHHHHHHhCCeEEEc------------cCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHHHHHH-HHcCCC
Q 031213 44 QRKAEMARNSDCFIAL------------PGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKA-VDDGFI 110 (164)
Q Consensus 44 ~Rk~~m~~~sDafIvl------------PGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~l~~~-~~egfi 110 (164)
+....++..||++|.- ..|+|. =+.|++.. .+|+|..+..| +.+.++.. -..|++
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~--~~~EAma~------G~PvI~s~~~~----~~e~~~~~~~~~g~~ 290 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGAT--VVSEAAVS------GTPVVGTGNGC----LAEIVPSVGEVVGYG 290 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCH--HHHHHHHT------TCCEEECCTTT----HHHHGGGGEEECCSS
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccH--HHHHHHhc------CCCEEEcCCCC----hHHHhcccCCCceEE
Confidence 4447788999998864 345665 47777765 89999988643 22221110 012332
Q ss_pred CccccCCeEEcCCHHHHHHHHHhhcC
Q 031213 111 SPSQRSILVSAPNAKELVQKLEEYVP 136 (164)
Q Consensus 111 ~~~~~~~i~~~~~~ee~~~~l~~~~~ 136 (164)
+-. |++++.+.|.+...
T Consensus 291 --------~~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 291 --------TDF-APDEARRTLAGLPA 307 (342)
T ss_dssp --------SCC-CHHHHHHHHHTSCC
T ss_pred --------cCC-CHHHHHHHHHHHHH
Confidence 222 88999998877644
No 141
>3c98_A Syntaxin-binding protein 1; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus} PDB: 3puj_A
Probab=20.42 E-value=72 Score=28.06 Aligned_cols=40 Identities=23% Similarity=0.147 Sum_probs=25.8
Q ss_pred CeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchH
Q 031213 54 DCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNS 96 (164)
Q Consensus 54 DafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~ 96 (164)
+++|++-|| +|.+|+..+..+.+.. ++.=|+++.+..-++
T Consensus 548 ~iIVFvvGG-vTy~E~~~l~~ls~~~--~~~~viiGsT~Iln~ 587 (606)
T 3c98_A 548 RLIIFILGG-VSLNEMRCAYEVTQAN--GKWEVLIGSTHILTP 587 (606)
T ss_dssp EEEEEEETC-EEHHHHHHHHHHHHHH--SSCEEEEEESSEECH
T ss_pred EEEEEEECC-cCHHHHHHHHHHHHHc--CCcEEEEEeCCeeCH
Confidence 467888888 5999999888886532 222344555445554
No 142
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=20.41 E-value=3.6e+02 Score=22.09 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=53.3
Q ss_pred HHHHhcCCEEEEEeCCCcc-cc-ccc------CCccceEeecCCH-HHHHHHHHHhCCeEEEccCCCcC---HHHHHHHH
Q 031213 6 HVVHRGGGHVLGIIPKTLM-NK-EIT------GETVGEVKPVADM-HQRKAEMARNSDCFIALPGGYGT---LEELLEVI 73 (164)
Q Consensus 6 ~ga~~~GG~viGIiP~~~~-~~-e~~------~~~~~el~i~~~m-~~Rk~~m~~~sDafIvlPGG~GT---LdEl~e~~ 73 (164)
-++.+-||+++.+-|.... .+ |.. -..+.|.++.... +..-..+.+.|+.=|+ -||-|. .+-+..++
T Consensus 78 ~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVI-Na~~~~~HPtQaLaDl~ 156 (325)
T 1vlv_A 78 TAFAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVY-NGLTDEFHPTQALADLM 156 (325)
T ss_dssp HHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEE-ESCCSSCCHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEE-eCCCCCCCcHHHHHHHH
Confidence 4678899999999665431 11 100 1123466654444 6666667777765443 344442 35566777
Q ss_pred HHHHc-CC-CCccEEEEecCccchHHHHHHHHHHH
Q 031213 74 TWAQL-GI-HDKPVGLINVDGYYNSLLNFIDKAVD 106 (164)
Q Consensus 74 t~~ql-g~-~~kPivlln~~gfw~~l~~~l~~~~~ 106 (164)
|+.+. |. ..+.|.+++. ++.+-.-.++..+..
T Consensus 157 Ti~e~~g~l~gl~va~vGD-~~~rva~Sl~~~~~~ 190 (325)
T 1vlv_A 157 TIEENFGRLKGVKVVFMGD-TRNNVATSLMIACAK 190 (325)
T ss_dssp HHHHHHSCSTTCEEEEESC-TTSHHHHHHHHHHHH
T ss_pred HHHHHhCCcCCcEEEEECC-CCcCcHHHHHHHHHH
Confidence 76554 43 3466666654 333433344444433
No 143
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=20.38 E-value=93 Score=23.32 Aligned_cols=63 Identities=25% Similarity=0.399 Sum_probs=35.6
Q ss_pred EEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEecCccchHHHHH-HHHHHHcCCCCccccCCeEEc-CCHHHHHHHHHh
Q 031213 56 FIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNF-IDKAVDDGFISPSQRSILVSA-PNAKELVQKLEE 133 (164)
Q Consensus 56 fIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~~gfw~~l~~~-l~~~~~egfi~~~~~~~i~~~-~~~ee~~~~l~~ 133 (164)
.|+|.||.|| -+.. +| ...+||++-++ | .+++++ ++.+...| + .+.++++ .+.+++.+++.+
T Consensus 5 avIlAaG~gt--Rl~~-lt----~~~pK~l~~i~--g--kpli~~~l~~l~~~g-~----~~i~vv~~~~~~~i~~~~~~ 68 (259)
T 1tzf_A 5 AVILAGGLGT--RLSE-ET----IVKPKPMVEIG--G--KPILWHIMKMYSVHG-I----KDFIICCGYKGYVIKEYFAN 68 (259)
T ss_dssp EEEEECSCC---------------CCCGGGCEET--T--EEHHHHHHHHHHHTT-C----CEEEEEECTTHHHHHHHHHT
T ss_pred EEEECCCCcc--cCCC-cc----CCCCccccEEC--C--EEHHHHHHHHHHHCC-C----CEEEEEcccCHHHHHHHHhh
Confidence 5789999999 2221 11 23478888775 3 457775 56777665 2 2334444 355677777765
Q ss_pred h
Q 031213 134 Y 134 (164)
Q Consensus 134 ~ 134 (164)
.
T Consensus 69 ~ 69 (259)
T 1tzf_A 69 Y 69 (259)
T ss_dssp H
T ss_pred c
Confidence 3
No 144
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=20.28 E-value=90 Score=23.05 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=20.4
Q ss_pred EEEccCCCcCHHHHH---HHHHHHH--cCCCCccEEEEec
Q 031213 56 FIALPGGYGTLEELL---EVITWAQ--LGIHDKPVGLINV 90 (164)
Q Consensus 56 fIvlPGG~GTLdEl~---e~~t~~q--lg~~~kPivlln~ 90 (164)
.|++|||.+..+.+. .+..|.+ .....||+..+..
T Consensus 76 ~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~ 115 (194)
T 4gdh_A 76 IAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICA 115 (194)
T ss_dssp EEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGG
T ss_pred EEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecc
Confidence 688899987555443 2333332 2345688877653
No 145
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=20.16 E-value=1.7e+02 Score=21.91 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=22.9
Q ss_pred HHHhCCeEEEccCCCcCHHHHHHHHHHHHcCCCCccEEEEec
Q 031213 49 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 90 (164)
Q Consensus 49 m~~~sDafIvlPGG~GTLdEl~e~~t~~qlg~~~kPivlln~ 90 (164)
+-...|++|+.|.....+.+..+.+. ....|+|+++.
T Consensus 54 ~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (283)
T 2ioy_A 54 IQQKVDVLLINPVDSDAVVTAIKEAN-----SKNIPVITIDR 90 (283)
T ss_dssp HHTTCSEEEECCSSTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEeCCchhhhHHHHHHHH-----HCCCeEEEecC
Confidence 34568999998865444444443332 23578888874
Done!