BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031215
         (164 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1X1O|A Chain A, Crystal Structure Of Project Id Tt0268 From Thermus
           Thermophilus Hb8
 pdb|1X1O|B Chain B, Crystal Structure Of Project Id Tt0268 From Thermus
           Thermophilus Hb8
 pdb|1X1O|C Chain C, Crystal Structure Of Project Id Tt0268 From Thermus
           Thermophilus Hb8
          Length = 286

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 34  LAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKD 93
           L ED G +GD+T +  +P D+E EA  LAKE G++AG+ +AE +F   DP       + +
Sbjct: 22  LREDLG-QGDLTSLLVVPEDLEGEAVILAKEGGVLAGLWVAERVFALADPRTAFTPLVAE 80

Query: 94  GDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMAD--LAHPATILETRK 151
           G  V +G +  +V G    I+  ER+ LN +QR+SGIATLTRA  +      A IL+TRK
Sbjct: 81  GARVAEGTEVARVRGPLRGILAGERLALNLLQRLSGIATLTRAYVEALAGTKAQILDTRK 140

Query: 152 TAPTLRLLDKWAV 164
           T P LR L+K+AV
Sbjct: 141 TTPGLRALEKYAV 153


>pdb|3L0G|A Chain A, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
           Resolution
 pdb|3L0G|B Chain B, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
           Resolution
 pdb|3L0G|C Chain C, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
           Resolution
 pdb|3L0G|D Chain D, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
           Resolution
          Length = 300

 Score = 86.7 bits (213), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 79/140 (56%), Gaps = 7/140 (5%)

Query: 29  VVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVE 88
           ++  AL ED GD+GD+T   +I ++ +V      +E+ ++ GI + E +F+     +K E
Sbjct: 29  IIHNALKEDLGDKGDIT-TNSILINEKVNFAINTRENLVVCGIPILEEVFNMNKEHVKYE 87

Query: 89  WSLKDGDHVHKGLQFGKVSGRAHSIVI--AERVVLNFMQRMSGIATLTRAMADLAH--PA 144
              KDGD   K      VSG A +I +   ERV+LNF+Q  SGIA++TR   D       
Sbjct: 88  IHKKDGDITGKNSTL--VSGEALAIYLLPIERVILNFIQHASGIASITRQFVDEVSGTKV 145

Query: 145 TILETRKTAPTLRLLDKWAV 164
            I  TRKT P LR+LDK++V
Sbjct: 146 KIRSTRKTTPGLRMLDKYSV 165


>pdb|3GNN|A Chain A, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Burkholderi Pseudomallei
 pdb|3GNN|B Chain B, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Burkholderi Pseudomallei
          Length = 298

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 4/134 (2%)

Query: 33  ALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLK 92
           ALAED G  GD T    +P      A  + +ED ++ G+   + +   VDPS++V+W  +
Sbjct: 36  ALAEDVGS-GDQTGR-LVPDGAPRRARVIVREDAVLCGVPWFDAVVRAVDPSIEVDWRHR 93

Query: 93  DGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHP--ATILETR 150
           +GD +       ++ G A +++ AER  LNF+Q +SG+A+ TR   D      A IL+TR
Sbjct: 94  EGDRMSADSTVCELRGPARALLTAERNALNFLQLLSGVASATRQYVDRIADTRARILDTR 153

Query: 151 KTAPTLRLLDKWAV 164
           KT P LRL  K+AV
Sbjct: 154 KTLPGLRLAQKYAV 167


>pdb|3TQV|A Chain A, Structure Of The Nicotinate-Nucleotide Pyrophosphorylase
           From Francisella Tularensis.
 pdb|3TQV|B Chain B, Structure Of The Nicotinate-Nucleotide Pyrophosphorylase
           From Francisella Tularensis
          Length = 287

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 5/138 (3%)

Query: 29  VVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVE 88
           +V+ +LAED    GD+T  A +  D++  A  + +E+ I+ G   A  + +++D ++++ 
Sbjct: 22  LVRESLAEDIA-TGDIT--AQLAEDIDTTAFCITREEXILCGQDFANEVINQLDKNIQIT 78

Query: 89  WSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL--AHPATI 146
           W   D   V    +  ++ G   SI+ AER +LNF+Q +SG AT+T  +  L   +   +
Sbjct: 79  WLYSDAQKVPANARIFELKGNVRSILTAERTILNFIQXLSGTATVTNKLVKLISQYKTKL 138

Query: 147 LETRKTAPTLRLLDKWAV 164
           L+TRKT P  RL  K+AV
Sbjct: 139 LDTRKTIPGFRLAQKYAV 156


>pdb|3C2E|A Chain A, Crystal Structure At 1.9a Of The Apo Quinolinate
           Phosphoribosyl Transferase (Bna6) From Saccharomyces
           Cerevisiae
 pdb|3C2O|A Chain A, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Sachharomyces Cerevisiae
           Complexed With Quinolinate
 pdb|3C2F|A Chain A, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Saccharomyces Cerevisiae
           Complexed With Prpp
 pdb|3C2V|A Chain A, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Saccharomyces Cerevisiae
           Complexed With Prpp And The Inhibitor Phthalate
          Length = 294

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 12/118 (10%)

Query: 57  EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG------LQFGKVSGRA 110
           EA+   K+DG++ G+  A+ +F++ +  L+VEW  K+G  +         +   K++G A
Sbjct: 41  EANLYCKQDGMLCGVPFAQEVFNQCE--LQVEWLFKEGSFLEPSKNDSGKIVVAKITGPA 98

Query: 111 HSIVIAERVVLNFMQRMSGIATLTRAMADLA----HPATILETRKTAPTLRLLDKWAV 164
            +I++AER  LN + R SGIAT +  +  LA    +  TI  TRKT P LR L+K+++
Sbjct: 99  KNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSM 156


>pdb|3C2R|A Chain A, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Sachharomyces Cerevisiae
           Complexed With The Inhibitor Phthalate
 pdb|3C2R|B Chain B, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Sachharomyces Cerevisiae
           Complexed With The Inhibitor Phthalate
          Length = 295

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 12/118 (10%)

Query: 57  EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG------LQFGKVSGRA 110
           EA+   K+DG++ G+  A+ +F++ +  L+VEW  K+G  +         +   K++G A
Sbjct: 42  EANLYCKQDGMLCGVPFAQEVFNQCE--LQVEWLFKEGSFLEPSKNDSGKIVVAKITGPA 99

Query: 111 HSIVIAERVVLNFMQRMSGIATLTRAMADLA----HPATILETRKTAPTLRLLDKWAV 164
            +I++AER  LN + R SGIAT +  +  LA    +  TI  TRKT P LR L+K+++
Sbjct: 100 KNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSM 157


>pdb|1QAP|A Chain A, Quinolinic Acid Phosphoribosyltransferase With Bound
           Quinolinic Acid
 pdb|1QAP|B Chain B, Quinolinic Acid Phosphoribosyltransferase With Bound
           Quinolinic Acid
          Length = 296

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 6/148 (4%)

Query: 23  TYDLKGVVKLALAEDAG---DRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFH 79
             D+   V  AL ED G   D G+      +P D +  A  + +EDG+  G    E +F 
Sbjct: 19  NLDIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFI 78

Query: 80  EV-DPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMA 138
           ++    +++ W + DGD +H      ++ G A  ++  ER  LNF+Q +SG+A+  R   
Sbjct: 79  QLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYV 138

Query: 139 DL--AHPATILETRKTAPTLRLLDKWAV 164
            L       +L+TRKT P LR   K+AV
Sbjct: 139 GLLAGTQTQLLDTRKTLPGLRTALKYAV 166


>pdb|1QPR|A Chain A, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|B Chain B, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|C Chain C, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|D Chain D, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|E Chain E, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|F Chain F, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPN|A Chain A, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|B Chain B, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|C Chain C, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|D Chain D, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|E Chain E, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|F Chain F, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPO|A Chain A, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|B Chain B, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|C Chain C, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|D Chain D, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|E Chain E, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|F Chain F, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPQ|A Chain A, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|B Chain B, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|C Chain C, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|D Chain D, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|E Chain E, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|F Chain F, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
          Length = 284

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 43  DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV--DPSLKVEWSLKDGDHVHKG 100
           DVT +AT+P      A  + +E G++AG+ +A +  +EV      +V   ++DG  V  G
Sbjct: 27  DVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPG 86

Query: 101 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH--PATILETRKTAPTLRL 158
                +  +   ++ AER +LN +  +SGIAT T A  D      A I +TRKT P LR 
Sbjct: 87  EALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRA 146

Query: 159 LDKWAV 164
           L K+AV
Sbjct: 147 LQKYAV 152


>pdb|3PAJ|A Chain A, 2.00 Angstrom Resolution Crystal Structure Of A
           Quinolinate Phosphoribosyltransferase From Vibrio
           Cholerae O1 Biovar Eltor Str. N16961
 pdb|3PAJ|B Chain B, 2.00 Angstrom Resolution Crystal Structure Of A
           Quinolinate Phosphoribosyltransferase From Vibrio
           Cholerae O1 Biovar Eltor Str. N16961
          Length = 320

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 3/150 (2%)

Query: 17  KLPSHPTYDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEM 76
           +LP+  T  +   +K  L        D+T  + IP D    A  + +E G+  G   A+ 
Sbjct: 41  QLPADITRSVIDTLKEDLGGTLDPAADIT-ASLIPADRISTATIITREAGVFCGQLWADE 99

Query: 77  IFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT-R 135
           +F ++   + +EW ++DGD +        ++G A  ++  ER  +NF+Q +SG AT T R
Sbjct: 100 VFKQLGGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATAR 159

Query: 136 AMADL-AHPATILETRKTAPTLRLLDKWAV 164
            + +L      +L+TRKT P LR   K+AV
Sbjct: 160 YVQELKGTQCRLLDTRKTIPGLRSALKYAV 189


>pdb|1O4U|A Chain A, Crystal Structure Of A Nicotinate Nucleotide
           Pyrophosphorylase (Tm1645) From Thermotoga Maritima At
           2.50 A Resolution
 pdb|1O4U|B Chain B, Crystal Structure Of A Nicotinate Nucleotide
           Pyrophosphorylase (Tm1645) From Thermotoga Maritima At
           2.50 A Resolution
          Length = 285

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 4/120 (3%)

Query: 47  MATIPL-DMEVEAHFLAKEDGIIA-GIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFG 104
           +A+ PL +    AH L K + ++A GI ++ M   ++   L  +++++DG+++      G
Sbjct: 33  LASFPLRNTTAGAHLLLKTENVVASGIEVSRMFLEKM--GLLSKFNVEDGEYLEGTGVIG 90

Query: 105 KVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPATILETRKTAPTLRLLDKWAV 164
           ++ G  + +++AER +LN +  M  +AT TR  A+    A I  TRK  P L +L K AV
Sbjct: 91  EIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHAKIAATRKILPGLGVLQKIAV 150


>pdb|2B7N|A Chain A, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7N|B Chain B, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7N|C Chain C, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7P|A Chain A, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7P|B Chain B, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7P|C Chain C, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7Q|A Chain A, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7Q|B Chain B, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7Q|C Chain C, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
          Length = 273

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 14/146 (9%)

Query: 25  DLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAG----IALAEMIFHE 80
           +++  ++ AL ED G  GD+     +  D +  A   AK++G+ +G    + L EM   E
Sbjct: 2   EIRTFLERALKEDLG-HGDL-FERVLEKDFKATAFVRAKQEGVFSGEKYALELLEMTGIE 59

Query: 81  VDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 140
              ++K +   K  D         ++ G    ++  ER +LN +Q  SGIATLT    + 
Sbjct: 60  CVQTIKDKERFKPKD------ALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEA 113

Query: 141 --AHPATILETRKTAPTLRLLDKWAV 164
             +H   +L+TRKT P LR+ +K++V
Sbjct: 114 LNSHKVRLLDTRKTRPLLRIFEKYSV 139


>pdb|2JBM|A Chain A, Qprtase Structure From Human
 pdb|2JBM|B Chain B, Qprtase Structure From Human
 pdb|2JBM|C Chain C, Qprtase Structure From Human
 pdb|2JBM|D Chain D, Qprtase Structure From Human
 pdb|2JBM|E Chain E, Qprtase Structure From Human
 pdb|2JBM|F Chain F, Qprtase Structure From Human
 pdb|2JBM|G Chain G, Qprtase Structure From Human
 pdb|2JBM|H Chain H, Qprtase Structure From Human
 pdb|2JBM|I Chain I, Qprtase Structure From Human
 pdb|2JBM|J Chain J, Qprtase Structure From Human
 pdb|2JBM|K Chain K, Qprtase Structure From Human
 pdb|2JBM|L Chain L, Qprtase Structure From Human
          Length = 299

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 57  EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 116
           +A   AK  G++AG    + IF +++   +V W L +G  +    +  +V G AH +++ 
Sbjct: 45  QAALWAKSPGVLAGQPFFDAIFTQLN--CQVSWFLPEGSKLVPVARVAEVRGPAHCLLLG 102

Query: 117 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 164
           ERV LN + R SGIA+   A  + A  A     +  TRKT P  RL++K+ +
Sbjct: 103 ERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGL 154


>pdb|3LAR|A Chain A, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|B Chain B, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|C Chain C, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|D Chain D, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|E Chain E, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|F Chain F, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
          Length = 305

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 57  EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 116
           +A   AK  G++AG    + IF +++   +V W L +G  +    +  +V G AH +++ 
Sbjct: 43  QAALWAKSPGVLAGQPFFDAIFTQLN--CQVSWFLPEGSKLVPVARVAEVRGPAHCLLLG 100

Query: 117 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 164
           ERV LN + R SGIA+   A  + A  A     +  TRKT P  RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGL 152


>pdb|4E4T|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole
           Carboxylase, Atpase Subunit From Burkholderia Ambifaria
 pdb|4E4T|B Chain B, Crystal Structure Of Phosphoribosylaminoimidazole
           Carboxylase, Atpase Subunit From Burkholderia Ambifaria
          Length = 419

 Score = 31.2 bits (69), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%)

Query: 24  YDLKGVVKLALAEDAGDR----GDVTCM--ATIPLDMEVEAHFLAKEDGIIAGIALAEMI 77
           YD KG V+++ A +A D     G V C+    +PL  EV A      DG  A   LA+ +
Sbjct: 183 YDGKGQVRVSTAREARDAHAALGGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQNV 242

Query: 78  FHE 80
            H 
Sbjct: 243 HHN 245


>pdb|4IZO|A Chain A, Crystal Structure Of Kinase Phosphoribosylaminoimidazole
           Carboxylase, Atpase Subunit From Burkholderia
           Thailandensis
          Length = 419

 Score = 30.0 bits (66), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 24  YDLKGVVKLALAEDA----GDRGDVTCM--ATIPLDMEVEAHFLAKEDGIIAGIALAEMI 77
           YD KG V++A A++A    G  G V C+    +PL  EV A      +G  A   LA+  
Sbjct: 183 YDGKGQVRVATAQEARDAYGSLGGVPCVLEKRLPLKYEVSALIARGANGASAVFPLAQNT 242

Query: 78  FH 79
            H
Sbjct: 243 HH 244


>pdb|1TD9|A Chain A, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|B Chain B, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|C Chain C, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|D Chain D, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|E Chain E, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|F Chain F, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1XCO|A Chain A, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|B Chain B, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|C Chain C, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|D Chain D, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|E Chain E, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|F Chain F, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
          Length = 329

 Score = 26.2 bits (56), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 97  VHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGI 130
           V+KGL  G VSG AHS     R  L  ++   G+
Sbjct: 119 VYKGLADGLVSGAAHSTADTVRPALQIIKTKEGV 152


>pdb|2IUT|A Chain A, P. Aeruginosa Ftsk Motor Domain, Dimeric
 pdb|2IUT|B Chain B, P. Aeruginosa Ftsk Motor Domain, Dimeric
          Length = 574

 Score = 26.2 bits (56), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 20  SHPTYDL-KGVVKLALAEDAGDRGDVTCMATIP 51
           S P YD  K  V LAL  D G R  +T +A +P
Sbjct: 183 SSPEYDEHKSTVPLALGHDIGGRPIITDLAKMP 215


>pdb|2IUU|A Chain A, P. Aeruginosa Ftsk Motor Domain, Hexamer
 pdb|2IUU|B Chain B, P. Aeruginosa Ftsk Motor Domain, Hexamer
 pdb|2IUU|C Chain C, P. Aeruginosa Ftsk Motor Domain, Hexamer
 pdb|2IUU|D Chain D, P. Aeruginosa Ftsk Motor Domain, Hexamer
 pdb|2IUU|E Chain E, P. Aeruginosa Ftsk Motor Domain, Hexamer
 pdb|2IUU|F Chain F, P. Aeruginosa Ftsk Motor Domain, Hexamer
          Length = 491

 Score = 26.2 bits (56), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 20  SHPTYDL-KGVVKLALAEDAGDRGDVTCMATIP 51
           S P YD  K  V LAL  D G R  +T +A +P
Sbjct: 183 SSPEYDEHKSTVPLALGHDIGGRPIITDLAKMP 215


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.135    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,895,794
Number of Sequences: 62578
Number of extensions: 186110
Number of successful extensions: 461
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 430
Number of HSP's gapped (non-prelim): 22
length of query: 164
length of database: 14,973,337
effective HSP length: 91
effective length of query: 73
effective length of database: 9,278,739
effective search space: 677347947
effective search space used: 677347947
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)