BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031215
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P77938|NADC_RHORU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Rhodospirillum rubrum GN=nadC PE=3 SV=1
Length = 296
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 7/153 (4%)
Query: 19 PSHPT-----YDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIAL 73
P+HP + + V+ ALAED G GD+T ATIP A F+A++ GI+AG+
Sbjct: 3 PNHPVAALSPFAIDEAVRRALAEDLGRAGDITSTATIPAATRAHARFVARQPGILAGLGC 62
Query: 74 AEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATL 133
A F +D ++ L+DG + G +V+G A +I+ AER LNF+ +SGIAT
Sbjct: 63 ARSAFALLDDTVTFTTPLEDGAEIAAGQTVAEVAGAARTILAAERTALNFLGHLSGIATR 122
Query: 134 TRAMAD-LAHP-ATILETRKTAPTLRLLDKWAV 164
TR D +AH A + TRKT P LR L+K+AV
Sbjct: 123 TRRFGDAIAHTRARLTCTRKTTPGLRGLEKYAV 155
>sp|P30819|NADC_PSEAE Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=nadC PE=3 SV=2
Length = 282
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 18 LPSHPTYDLKG----VVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIAL 73
+P+ DL+G V+ ALAED G GD+T P E EA + +E IAG A
Sbjct: 1 MPNLTLADLQGEIQANVRTALAEDVGG-GDLTAQLIDP-QREAEARVITREHATIAGRAW 58
Query: 74 AEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATL 133
+ +F +VDP + V W ++DG V ++ G A +++ ER LNF+Q +SG AT
Sbjct: 59 VDEVFRQVDPRVLVTWQVEDGQRVEPNQMLFQLKGPARALLTGERSALNFLQLLSGTATR 118
Query: 134 TRAMADL--AHPATILETRKTAPTLRLLDKWAV 164
++ ADL +L+TRKT P LRL K+AV
Sbjct: 119 SQHYADLVAGTAVKLLDTRKTLPGLRLAQKYAV 151
>sp|P39666|NADC_BACSU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Bacillus subtilis (strain 168) GN=nadC PE=1 SV=2
Length = 289
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Query: 26 LKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSL 85
LK ++ ED G GD+T +I + EA +AK +GI AG A+ + F +D ++
Sbjct: 6 LKKLLNHFFLEDIG-TGDLTSQ-SIFGEQSCEAEIVAKSEGIFAGAAIIKEGFSLLDENV 63
Query: 86 KVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLA--HP 143
+ KDGD +HKG ++ G A +++ ERVVLN +QR+SGIAT+TR
Sbjct: 64 QSILHKKDGDMLHKGEVIAELHGPAAALLSGERVVLNLIQRLSGIATMTREAVRCLDDEQ 123
Query: 144 ATILETRKTAPTLRLLDKWAV 164
I +TRKT P LR+L+K+AV
Sbjct: 124 IKICDTRKTTPGLRMLEKYAV 144
>sp|P74301|NADC_SYNY3 Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=nadC
PE=3 SV=1
Length = 295
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 8/134 (5%)
Query: 34 LAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKD 93
LAED G RGD + + L +A ++AKE+G+IAG+ +A IF +DPS++ + +
Sbjct: 29 LAEDIG-RGDWSTQG-LGLQHRGQARWVAKENGVIAGLPMAARIFQLLDPSMEFQVLAGE 86
Query: 94 GDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTR----AMADLAHPATILET 149
G V ++G S++ ERV LN + +SGIAT+TR A+AD +P ++T
Sbjct: 87 GQAVTASTVVATMAGNLGSLLTGERVALNLVMGLSGIATMTRQYVQAIAD--YPTRFVDT 144
Query: 150 RKTAPTLRLLDKWA 163
RKT P LR+L+K+A
Sbjct: 145 RKTTPGLRVLEKYA 158
>sp|O27860|NADC_METTH Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=nadC PE=3 SV=1
Length = 279
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 43 DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQ 102
D+T A I V A +++E+G++AG+ +AEM+ E S+ + W DGD + G +
Sbjct: 17 DITTEALIDRGTRVVADIVSREEGVVAGVEVAEMMAREFSISI-IRWK-DDGDPLSGGER 74
Query: 103 FGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRL 158
+ G A I++ ER +LN M +MSGIATLTR+M A I TRKT P L+
Sbjct: 75 VLTLEGDAMDILMVERTMLNLMMKMSGIATLTRSMLQRARAVNEGIRIAATRKTTPGLQW 134
Query: 159 LDKWAV 164
+K AV
Sbjct: 135 FEKQAV 140
>sp|A7SG73|NADC_NEMVE Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Fragment)
OS=Nematostella vectensis GN=qprt PE=3 SV=1
Length = 289
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 57 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 116
+A L K DG++AG+ IF ++D KVEW +GD + G V+G + I++
Sbjct: 47 KAVLLCKSDGVLAGVPFFNAIFEKLD--CKVEWQNNEGDPIKAVSVIGTVTGPVNKILLG 104
Query: 117 ERVVLNFMQRMSGIATLTRAMADLAHP----ATILETRKTAPTLRLLDKWAV 164
ERV LN + R SGIAT +R++ +L I TRKT P R+++K+A+
Sbjct: 105 ERVALNCISRASGIATKSRSLTNLKEQYQWHGEIAGTRKTTPGFRVVEKYAL 156
>sp|P43619|NADC_YEAST Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=BNA6 PE=1 SV=1
Length = 295
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 12/118 (10%)
Query: 57 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG------LQFGKVSGRA 110
EA+ K+DG++ G+ A+ +F++ + L+VEW K+G + + K++G A
Sbjct: 42 EANLYCKQDGMLCGVPFAQEVFNQCE--LQVEWLFKEGSFLEPSKNDSGKIVVAKITGPA 99
Query: 111 HSIVIAERVVLNFMQRMSGIATLTRAMADLA----HPATILETRKTAPTLRLLDKWAV 164
+I++AER LN + R SGIAT + + LA + TI TRKT P LR L+K+++
Sbjct: 100 KNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSM 157
>sp|P46714|NADC_MYCLE Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Mycobacterium leprae (strain TN) GN=nadC PE=3 SV=1
Length = 284
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 27 KGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV--DPS 84
+ ++ AL ED D+T AT+P V + +E G+IAG+ +A ++ EV
Sbjct: 11 RDTIRRALHEDLRYGLDITTQATVPAGTVVTGSMVPREPGVIAGVDVALLVLDEVFGVDG 70
Query: 85 LKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH-- 142
+V + ++DG + G V A ++ AER +LN + MSGIAT+T A D
Sbjct: 71 YRVLYRVEDGARLQSGQPLLTVQAAARGLLTAERTMLNLVCHMSGIATVTVAWVDAVRGT 130
Query: 143 PATILETRKTAPTLRLLDKWAV 164
A I +TRKT P LR L K+AV
Sbjct: 131 KAKIRDTRKTLPGLRALQKYAV 152
>sp|P30012|NADC_SALTY Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=nadC PE=1 SV=3
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 23 TYDLKGVVKLALAEDAG---DRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFH 79
D+ V AL ED G D G+ +P D + A + +EDG+ G E +F
Sbjct: 20 NLDIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFI 79
Query: 80 EV-DPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMA 138
++ +++ W + DGD +H +++G A ++ ER LNF+Q +SG+A+ R
Sbjct: 80 QLAGDDVRLTWHVDDGDAIHANQTVFELNGPARVLLTGERTALNFVQTLSGVASEVRRYV 139
Query: 139 DL--AHPATILETRKTAPTLRLLDKWAV 164
L +L+TRKT P LR K+AV
Sbjct: 140 GLLAGTQTQLLDTRKTLPGLRTALKYAV 167
>sp|O28439|NADC_ARCFU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=nadC PE=3 SV=1
Length = 258
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 42 GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGL 101
GDVT + T +VEA ++K +G++AG+ + +++F + + V S KDG+ + G
Sbjct: 4 GDVTAIPT----KDVEAVIVSKGEGVLAGVGVVKILFDLAE--IVVMESKKDGEPIKPGD 57
Query: 102 QFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLA---HPATIL-ETRKTAPTLR 157
++ G++ SI+ ER+ +N + RMSGIAT T M + A +P ++ TRKT P R
Sbjct: 58 VVMRLRGKSDSILATERLAINILMRMSGIATATAKMVERARRVNPKVVVAATRKTTPGFR 117
Query: 158 LLDKWAV 164
+ +K AV
Sbjct: 118 IFEKMAV 124
>sp|O06594|NADC_MYCTU Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Mycobacterium tuberculosis GN=nadC PE=1 SV=1
Length = 285
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 43 DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV--DPSLKVEWSLKDGDHVHKG 100
DVT +AT+P A + +E G++AG+ +A + +EV +V ++DG V G
Sbjct: 28 DVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPG 87
Query: 101 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH--PATILETRKTAPTLRL 158
+ + ++ AER +LN + +SGIAT T A D A I +TRKT P LR
Sbjct: 88 EALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRA 147
Query: 159 LDKWAV 164
L K+AV
Sbjct: 148 LQKYAV 153
>sp|P30011|NADC_ECOLI Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Escherichia coli (strain K12) GN=nadC PE=3 SV=7
Length = 297
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 25 DLKGVVKLALAEDAGDRGDVTCMAT---IPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV 81
D+ G V AL ED G D T +P + A + +E+G+ G E +F ++
Sbjct: 22 DIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQL 81
Query: 82 -DPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 140
+ + W + DGD ++ ++ G + ++ ER LNF+Q +SG+A+ R +L
Sbjct: 82 AGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVEL 141
Query: 141 AHPAT--ILETRKTAPTLRLLDKWAV 164
+L+TRKT P LR K+AV
Sbjct: 142 LEGTNTQLLDTRKTLPGLRSALKYAV 167
>sp|Q3T063|NADC_BOVIN Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Bos
taurus GN=QPRT PE=2 SV=1
Length = 299
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 57 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 116
+A AK G++AG + IF +V+ +V W L +G + + +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFLDAIFAQVN--CQVSWFLPEGSKLVPVAKVAEVRGPAHCLLLG 100
Query: 117 ERVVLNFMQRMSGIATLTRAMADLAH----PATILETRKTAPTLRLLDKWAV 164
ERV LN + R SG+A++ A + A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGVASMAAAAVETARGTGWAGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q57916|NADC_METJA Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=nadC PE=3
SV=1
Length = 283
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 24 YDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDP 83
Y LK ++K +L D G GD+T + IP ++ + AKE I+ GI F E
Sbjct: 5 YALK-ILKKSLEYDVG-FGDITTNSIIPEGVKAKGVIKAKEKCIVCGIDFIVAFFEEY-- 60
Query: 84 SLKVEWSLKDGDHVHKG-LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH 142
+K + DG+ + L+F G A +I++ ER LN + +SGIAT+T + A
Sbjct: 61 GIKCKKLFNDGEEAYGNILEF---EGDARTILMLERTALNLLMHLSGIATMTNRIVKKAK 117
Query: 143 PAT----ILETRKTAPTLRLLDKWAV 164
+ TRKT P L L K+AV
Sbjct: 118 SVNKNVRVACTRKTLPLLSPLQKYAV 143
>sp|Q91X91|NADC_MOUSE Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Mus
musculus GN=Qprt PE=2 SV=1
Length = 299
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 57 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 116
+A AK G++AG + IF +++ +V W L +G + ++ +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFFDAIFTQLN--CQVSWFLPEGSKLVPVVKVAEVKGPAHHLLLG 100
Query: 117 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 164
ERV LN + R SGIA+ ++A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAATAVEVARSTGWTGHVAGTRKTTPGFRLVEKYGL 152
>sp|O25909|NADC_HELPY Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=nadC PE=1 SV=1
Length = 273
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 25 DLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAG----IALAEMIFHE 80
+++ ++ AL ED G GD+ + D + A AK++G+ +G + L EM E
Sbjct: 2 EIRTFLERALKEDLG-HGDL-FERVLEKDFKATAFVRAKQEGVFSGEKYALELLEMTGIE 59
Query: 81 VDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 140
++K + K D ++ G ++ ER +LN +Q SGIATLT +
Sbjct: 60 CVQTIKDKERFKPKD------ALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEA 113
Query: 141 --AHPATILETRKTAPTLRLLDKWAV 164
+H +L+TRKT P LR+ +K++V
Sbjct: 114 LNSHKVRLLDTRKTRPLLRIFEKYSV 139
>sp|Q75JX0|NADC_DICDI Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Dictyostelium discoideum GN=qprt PE=3 SV=1
Length = 300
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 22 PTYDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV 81
P + ++ ++K L ED C+ + D +V AH L K++G+ +G + IF+++
Sbjct: 8 PKFKIEKIIKEWLEEDIPSFDYGGCV--VGSDEKV-AHLLGKQNGVFSGSIFFQEIFNQL 64
Query: 82 DPSLKVEWSLKDGDHV--------HKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATL 133
KV W +KDG+ +K V G +I+I ER+ LN + R GI T
Sbjct: 65 --GCKVIWFIKDGESFSMTHGPEKNKPQVLAHVIGPVRNILIGERLSLNILSRSCGITTQ 122
Query: 134 TRAMADLAH-----------PATILETRKTAPTLRLLDKWAV 164
+ L I TRKT P RL++K A+
Sbjct: 123 GYNVKKLVDGDNEQQQQQPWKGKIAGTRKTTPGFRLVEKLAL 164
>sp|Q9ZJN2|NADC_HELPJ Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Helicobacter pylori (strain J99) GN=nadC PE=3 SV=1
Length = 273
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 25 DLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPS 84
++K ++ AL ED G GD+ + D + A AK++G+ +G A +
Sbjct: 2 EIKTFLECALKEDLG-HGDLF-ERVLEKDFKATAFVRAKQEGVFSGEKYALELLQMT--G 57
Query: 85 LKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT-RAMADLAHP 143
++ ++KD + ++ G ++ ER +LN +Q SGIATLT R + L P
Sbjct: 58 IECVQNIKDKERFKPKDTLMEIRGDFSMLLKIERTLLNLLQHSSGIATLTSRFVEALNSP 117
Query: 144 AT-ILETRKTAPTLRLLDKWAV 164
+L+TRKT P LR+ +K++V
Sbjct: 118 KVRLLDTRKTRPLLRIFEKYSV 139
>sp|Q15274|NADC_HUMAN Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Homo
sapiens GN=QPRT PE=1 SV=3
Length = 297
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 57 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 116
+A AK G++AG + IF +++ +V W L +G + + +V G AH +++
Sbjct: 43 QAALWAKSPGVLAGQPFFDAIFTQLN--CQVSWFLPEGSKLVPVARVAEVRGPAHCLLLG 100
Query: 117 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 164
ERV LN + R SGIA+ A + A A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q5I0M2|NADC_RAT Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Rattus
norvegicus GN=Qprt PE=2 SV=1
Length = 299
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 57 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 116
+A AK G++AG + IF +++ +V W L +G + ++ +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFFDAIFTQLN--CQVSWLLPEGSKLVPVVKVAEVRGPAHHLLLG 100
Query: 117 ERVVLNFMQRMSGI----ATLTRAMADLAHPATILETRKTAPTLRLLDKWAV 164
ERV LN + R SGI AT + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAATAVEVATSTGWAGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q9CLU4|MODD_PASMU Putative pyrophosphorylase ModD OS=Pasteurella multocida (strain
Pm70) GN=modD PE=3 SV=1
Length = 282
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 41 RGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG 100
RGD+T A + E F K GI+AGI++AE + ++D +V +K+G+ V G
Sbjct: 19 RGDLTTHALGLESIPAEICFKRKNAGIVAGISIAEKLLRKLDIHPQV--YVKEGEFVEAG 76
Query: 101 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAM---ADLAHPATILE-TRKTAPTL 156
G A + A +VV ++ G+A T M A +PA ++ TRK+ P
Sbjct: 77 SLLLSAKGSADKLHQAWKVVQLVLEWSCGVAQYTAEMISNAKAINPAAVVACTRKSIPNT 136
Query: 157 RLLDKWAV 164
R L AV
Sbjct: 137 RKLATNAV 144
>sp|Q57278|MODD_HAEIN Putative pyrophosphorylase ModD OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=modD PE=3 SV=1
Length = 281
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 41 RGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVD--PSLKVEWSLKDGDHVH 98
RGD+T A ++ + F K G++AG+++AE + ++D P L V K+G+ V
Sbjct: 19 RGDLTTHALSIENIPAKILFKRKNAGVVAGVSVAEKLLKKLDIQPHLYV----KEGEWVE 74
Query: 99 KGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAM---ADLAHPATILE-TRKTAP 154
G G + + A +VV ++ G+A T M A +P ++ TRK+ P
Sbjct: 75 SGALLISAEGMSEQLHQAWKVVQLVLEWSCGVAQYTAEMIANAKSVNPTAVVACTRKSIP 134
Query: 155 TLRLL 159
R L
Sbjct: 135 NTRKL 139
>sp|Q5HK16|PURA_STAEQ Adenylosuccinate synthetase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=purA PE=3 SV=1
Length = 427
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + R+ P L W
Sbjct: 344 TAYELDGEKITEYPANLDQLRRCKPIFEELPGWT 377
>sp|Q8CQK1|PURA_STAES Adenylosuccinate synthetase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=purA PE=3 SV=1
Length = 427
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + R+ P L W
Sbjct: 344 TAYELDGEKITEYPANLDQLRRCKPIFEELPGWT 377
>sp|A8MH14|AROC_ALKOO Chorismate synthase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=aroC PE=3 SV=1
Length = 384
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 21 HPTYDLKGVVKLALAEDAGDR-GDV--TCMATIPLDMEVEAHFLAKEDGIIAGIALAEMI 77
+PT + + + ++ A++ GD G V + +P+ + AHF K DGI+A ++
Sbjct: 189 NPTIEERMMGEIQRAKETGDSLGGVFEVIVRNVPIGIGSYAHFDRKLDGILAQGLMSLQA 248
Query: 78 FHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAH 111
V+ +E S K G H +++ + G H
Sbjct: 249 IKAVEIGNGIEGSSKMGSQFHDEIKYSEAKGYYH 282
>sp|B2A449|PURA_NATTJ Adenylosuccinate synthetase OS=Natranaerobius thermophilus (strain
ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=purA PE=3
SV=1
Length = 429
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 94 GDHV-HKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 140
GD + KG ++G +GR + + V+LN+ +R++G + + D+
Sbjct: 286 GDQIREKGKEYGTTTGRPRRVGWLDTVILNYSRRINGFNHIALTLLDV 333
>sp|Q91Y74|SIA4C_MOUSE CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,
3-sialyltransferase 4 OS=Mus musculus GN=St3gal4 PE=2
SV=1
Length = 333
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 24 YDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAK----EDGIIAGIALAEMIFH 79
YD+ V++L A AG GDV TI L AHF K D ++ +A M FH
Sbjct: 141 YDV--VIRLNNAPVAGYEGDVGSKTTIRLFYPESAHFDPKIENNPDTLLVLVAFKAMDFH 198
Query: 80 EVDPSLKVEWSLKDGDHVHKGL 101
+E L D V KG
Sbjct: 199 W------IETILSDKKRVRKGF 214
>sp|Q6GKS8|PURA_STAAR Adenylosuccinate synthetase OS=Staphylococcus aureus (strain
MRSA252) GN=purA PE=3 SV=1
Length = 427
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + ++ P L W
Sbjct: 344 TAYELDGKEITEYPANLDQLKRCKPIFEELPGWT 377
>sp|P99099|PURA_STAAN Adenylosuccinate synthetase OS=Staphylococcus aureus (strain N315)
GN=purA PE=1 SV=1
Length = 427
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + ++ P L W
Sbjct: 344 TAYELDGKEITEYPANLDQLKRCKPIFEELPGWT 377
>sp|P65884|PURA_STAAM Adenylosuccinate synthetase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=purA PE=1 SV=1
Length = 427
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + ++ P L W
Sbjct: 344 TAYELDGKEITEYPANLDQLKRCKPIFEELPGWT 377
>sp|Q8NYX6|PURA_STAAW Adenylosuccinate synthetase OS=Staphylococcus aureus (strain MW2)
GN=purA PE=3 SV=1
Length = 427
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + ++ P L W
Sbjct: 344 TAYELDGKEITEYPANLDQLKRCKPIFEELPGWT 377
>sp|Q6GD73|PURA_STAAS Adenylosuccinate synthetase OS=Staphylococcus aureus (strain
MSSA476) GN=purA PE=3 SV=1
Length = 427
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + ++ P L W
Sbjct: 344 TAYELDGKEITEYPANLDQLKRCKPIFEELPGWT 377
>sp|Q5HJX8|PURA_STAAC Adenylosuccinate synthetase OS=Staphylococcus aureus (strain COL)
GN=purA PE=3 SV=1
Length = 427
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + ++ P L W
Sbjct: 344 TAYELDGKEITEYPANLDQLKRCKPIFEELPGWT 377
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 31.2 bits (69), Expect = 3.5, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 80 EVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMAD 139
E P +K ++S+ DGD++H +QF + + + + I I R+ + + R S ++ L + D
Sbjct: 774 EATPDIKTKFSM-DGDYLHANVQFDREAQKEYFIPI--RISDSGVPRQSAVSILHLVIGD 830
Query: 140 L 140
+
Sbjct: 831 V 831
>sp|P61131|SIA4C_RAT CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,
3-sialyltransferase 4 OS=Rattus norvegicus GN=St3gal4
PE=2 SV=1
Length = 333
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 24 YDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAK----EDGIIAGIALAEMIFH 79
YD+ V++L A AG GDV TI L AHF K D ++ +A M FH
Sbjct: 141 YDV--VIRLNNAPVAGYEGDVGSKTTIRLFYPESAHFDPKIENNPDTLLVLVAFKAMDFH 198
Query: 80 EVDPSLKVEWSLKDGDHVHKGL 101
+E L D V KG
Sbjct: 199 W------IETILSDKKRVRKGF 214
>sp|Q4A164|PURA_STAS1 Adenylosuccinate synthetase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=purA
PE=3 SV=1
Length = 427
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 22/94 (23%)
Query: 92 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 140
+DG H+ + G ++G +GR + + VVL +R SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRASGITDLSINSIDVLTGLKEVKIC 343
Query: 141 -----------AHPATILETRKTAPTLRLLDKWA 163
+PA + + ++ P L W
Sbjct: 344 TAYELDGKEITEYPANLKDLQRCKPIFETLPGWT 377
>sp|Q5CZC0|FSIP2_HUMAN Fibrous sheath-interacting protein 2 OS=Homo sapiens GN=FSIP2 PE=2
SV=4
Length = 6907
Score = 30.0 bits (66), Expect = 6.7, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 60 FLAKEDGIIAGIALAEMIFHEVDPSLKVEWS----LKDGDHVHKGLQFGKVSGRA--HSI 113
FL+K +AG + E+++H + P L E S L D DHV + + GK + +S
Sbjct: 5219 FLSK----LAGFIMKEIMYHHLQPFLHGEESSFSDLSDYDHVSELAKSGKEKTQPSLYSA 5274
Query: 114 VIAERVVLNFMQRMSGIATLT 134
E ++++ + + + +T
Sbjct: 5275 TFLEDIIIDLVHKFCSLLIIT 5295
>sp|C0ZA40|PURA_BREBN Adenylosuccinate synthetase OS=Brevibacillus brevis (strain 47 /
JCM 6285 / NBRC 100599) GN=purA PE=3 SV=1
Length = 428
Score = 30.0 bits (66), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 94 GDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPATILETRKT 152
GDH+ + G ++G +GR + + VV+ +R+SGI L T L+T
Sbjct: 286 GDHIREVGFEYGTTTGRPRRVGWFDSVVVRHARRVSGITGLA---------ITKLDTLSG 336
Query: 153 APTLRLLDKW 162
TLR+ +
Sbjct: 337 IETLRICTAY 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,262,469
Number of Sequences: 539616
Number of extensions: 2383567
Number of successful extensions: 7178
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 7129
Number of HSP's gapped (non-prelim): 43
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)