Query 031216
Match_columns 163
No_of_seqs 128 out of 1033
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 17:23:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ijp_A DHPR, dihydrodipicolina 100.0 4.1E-28 1.4E-32 202.8 14.4 122 34-162 20-144 (288)
2 4f3y_A DHPR, dihydrodipicolina 99.9 6.8E-27 2.3E-31 193.8 13.6 120 35-162 7-129 (272)
3 1dih_A Dihydrodipicolinate red 99.9 5.8E-25 2E-29 182.0 11.9 122 34-162 4-128 (273)
4 3qy9_A DHPR, dihydrodipicolina 99.9 8.5E-23 2.9E-27 166.8 10.2 106 35-162 3-108 (243)
5 1p9l_A Dihydrodipicolinate red 99.9 4.1E-21 1.4E-25 157.0 14.0 101 36-162 1-104 (245)
6 1vm6_A DHPR, dihydrodipicolina 99.8 2E-20 6.8E-25 151.5 10.8 98 35-162 12-109 (228)
7 4had_A Probable oxidoreductase 99.8 6.4E-19 2.2E-23 147.5 10.8 117 33-159 21-140 (350)
8 4fb5_A Probable oxidoreductase 99.8 1.8E-18 6E-23 145.1 12.7 116 34-159 24-148 (393)
9 3ec7_A Putative dehydrogenase; 99.7 2.7E-17 9.2E-22 139.1 12.7 114 34-157 22-139 (357)
10 3rc1_A Sugar 3-ketoreductase; 99.7 2.4E-17 8.1E-22 139.1 12.1 116 34-159 26-143 (350)
11 3i23_A Oxidoreductase, GFO/IDH 99.7 4.8E-17 1.6E-21 136.9 12.8 117 34-159 1-119 (349)
12 3evn_A Oxidoreductase, GFO/IDH 99.7 8.4E-17 2.9E-21 134.2 14.0 116 34-159 4-121 (329)
13 4ew6_A D-galactose-1-dehydroge 99.7 6.6E-17 2.3E-21 135.6 13.3 110 34-159 24-135 (330)
14 3e18_A Oxidoreductase; dehydro 99.7 6.4E-17 2.2E-21 136.9 12.8 115 34-159 4-119 (359)
15 1zh8_A Oxidoreductase; TM0312, 99.7 5.7E-17 1.9E-21 136.1 12.2 118 32-159 15-136 (340)
16 4gqa_A NAD binding oxidoreduct 99.7 2.9E-17 1E-21 140.6 10.6 116 34-159 25-150 (412)
17 3kux_A Putative oxidoreductase 99.7 1.4E-16 4.7E-21 134.0 14.6 115 34-160 6-122 (352)
18 4hkt_A Inositol 2-dehydrogenas 99.7 7.8E-17 2.7E-21 134.2 12.9 116 34-160 2-118 (331)
19 1lc0_A Biliverdin reductase A; 99.7 1.5E-16 5E-21 131.6 14.0 113 31-159 3-119 (294)
20 3fhl_A Putative oxidoreductase 99.7 1.2E-16 4E-21 135.1 13.5 113 34-159 4-119 (362)
21 3euw_A MYO-inositol dehydrogen 99.7 1.1E-16 3.7E-21 134.0 13.2 116 34-159 3-119 (344)
22 2nvw_A Galactose/lactose metab 99.7 1.1E-16 3.7E-21 141.1 13.6 142 9-159 5-169 (479)
23 3db2_A Putative NADPH-dependen 99.7 7.8E-17 2.7E-21 135.5 11.4 116 34-159 4-120 (354)
24 3e82_A Putative oxidoreductase 99.7 2.1E-16 7.4E-21 133.8 14.0 116 33-160 5-122 (364)
25 3e9m_A Oxidoreductase, GFO/IDH 99.7 1.1E-16 3.8E-21 133.7 12.0 116 34-159 4-121 (330)
26 3ohs_X Trans-1,2-dihydrobenzen 99.7 1.3E-16 4.6E-21 133.1 12.2 116 34-159 1-120 (334)
27 3moi_A Probable dehydrogenase; 99.7 8.6E-17 3E-21 137.2 11.2 116 34-159 1-118 (387)
28 3q2i_A Dehydrogenase; rossmann 99.7 1.1E-16 3.9E-21 134.5 11.8 118 32-159 10-129 (354)
29 3mz0_A Inositol 2-dehydrogenas 99.7 1.8E-16 6.3E-21 132.7 12.8 114 34-157 1-118 (344)
30 3ezy_A Dehydrogenase; structur 99.7 1.3E-16 4.5E-21 133.6 11.9 116 34-159 1-118 (344)
31 1ydw_A AX110P-like protein; st 99.7 1.4E-16 4.7E-21 134.4 12.0 121 32-159 3-125 (362)
32 3o9z_A Lipopolysaccaride biosy 99.7 4.1E-16 1.4E-20 130.0 14.3 116 34-159 2-126 (312)
33 3f4l_A Putative oxidoreductase 99.7 2.4E-16 8.1E-21 132.3 12.6 116 34-159 1-119 (345)
34 4h3v_A Oxidoreductase domain p 99.7 6.9E-17 2.4E-21 135.3 9.0 115 35-159 6-132 (390)
35 2ho3_A Oxidoreductase, GFO/IDH 99.7 5.4E-16 1.8E-20 128.8 14.0 114 35-159 1-116 (325)
36 3upl_A Oxidoreductase; rossman 99.7 9.6E-17 3.3E-21 140.9 9.5 123 33-162 21-164 (446)
37 3m2t_A Probable dehydrogenase; 99.7 5.5E-16 1.9E-20 131.1 13.8 116 34-159 4-122 (359)
38 3gdo_A Uncharacterized oxidore 99.7 3.5E-16 1.2E-20 132.1 12.5 114 34-159 4-119 (358)
39 3cea_A MYO-inositol 2-dehydrog 99.7 6E-16 2E-20 129.0 13.5 119 31-159 4-126 (346)
40 3oa2_A WBPB; oxidoreductase, s 99.7 8.2E-16 2.8E-20 128.5 14.2 120 34-159 2-127 (318)
41 3c1a_A Putative oxidoreductase 99.7 3.1E-16 1E-20 129.9 11.3 117 31-159 6-123 (315)
42 3uuw_A Putative oxidoreductase 99.7 3.3E-16 1.1E-20 129.2 11.0 114 34-159 5-120 (308)
43 4gmf_A Yersiniabactin biosynth 99.7 1E-16 3.6E-21 137.5 8.3 114 32-159 4-122 (372)
44 1h6d_A Precursor form of gluco 99.7 1.8E-16 6.1E-21 137.6 9.8 122 32-159 80-204 (433)
45 2nu8_A Succinyl-COA ligase [AD 99.7 1.6E-15 5.6E-20 125.9 14.3 114 34-161 6-120 (288)
46 1tlt_A Putative oxidoreductase 99.7 8.7E-16 3E-20 127.2 12.5 114 34-159 4-119 (319)
47 2ixa_A Alpha-N-acetylgalactosa 99.6 6.3E-16 2.2E-20 134.2 11.5 123 30-159 15-145 (444)
48 3oqb_A Oxidoreductase; structu 99.6 3.6E-16 1.2E-20 132.5 8.9 118 33-159 4-137 (383)
49 1oi7_A Succinyl-COA synthetase 99.6 3.9E-15 1.3E-19 123.8 14.3 113 34-160 6-119 (288)
50 3dty_A Oxidoreductase, GFO/IDH 99.6 1.3E-15 4.4E-20 130.3 11.5 121 33-159 10-139 (398)
51 3ip3_A Oxidoreductase, putativ 99.6 7.6E-16 2.6E-20 128.8 9.7 114 34-157 1-119 (337)
52 3u3x_A Oxidoreductase; structu 99.6 1.8E-15 6.2E-20 128.1 11.7 114 35-159 26-142 (361)
53 2glx_A 1,5-anhydro-D-fructose 99.6 3.5E-15 1.2E-19 123.7 12.0 113 36-159 1-116 (332)
54 1f06_A MESO-diaminopimelate D- 99.6 2.6E-15 8.9E-20 125.8 10.8 109 34-158 2-112 (320)
55 2p2s_A Putative oxidoreductase 99.6 5.3E-15 1.8E-19 123.3 12.6 115 34-159 3-120 (336)
56 2yv2_A Succinyl-COA synthetase 99.6 1.3E-14 4.5E-19 121.0 14.8 112 35-160 13-126 (297)
57 3v5n_A Oxidoreductase; structu 99.6 3E-15 1E-19 129.1 11.0 120 34-159 36-164 (417)
58 3btv_A Galactose/lactose metab 99.6 2.6E-15 8.9E-20 130.4 10.5 117 34-159 19-149 (438)
59 2yv1_A Succinyl-COA ligase [AD 99.6 1.2E-14 4.2E-19 121.0 13.5 112 35-160 13-125 (294)
60 3bio_A Oxidoreductase, GFO/IDH 99.6 1.1E-14 3.6E-19 121.3 10.0 110 34-158 8-119 (304)
61 3do5_A HOM, homoserine dehydro 99.5 8.7E-15 3E-19 123.8 8.3 123 34-162 1-142 (327)
62 1xea_A Oxidoreductase, GFO/IDH 99.5 3.5E-14 1.2E-18 117.9 10.9 113 35-159 2-117 (323)
63 2dc1_A L-aspartate dehydrogena 99.5 1.1E-13 3.6E-18 110.7 11.5 102 36-158 1-104 (236)
64 3mtj_A Homoserine dehydrogenas 99.5 5.5E-14 1.9E-18 123.4 9.5 113 35-159 10-132 (444)
65 3ing_A Homoserine dehydrogenas 99.4 8.7E-14 3E-18 117.6 5.9 118 34-157 3-137 (325)
66 3c8m_A Homoserine dehydrogenas 99.4 4.3E-13 1.5E-17 113.2 9.5 117 35-157 6-141 (331)
67 1ebf_A Homoserine dehydrogenas 99.4 1.4E-12 4.9E-17 111.3 9.5 116 33-158 2-138 (358)
68 2ejw_A HDH, homoserine dehydro 99.3 1.6E-12 5.6E-17 110.1 8.0 113 35-163 3-124 (332)
69 1j5p_A Aspartate dehydrogenase 99.3 4E-12 1.4E-16 104.3 9.7 101 35-158 12-114 (253)
70 3mwd_B ATP-citrate synthase; A 99.3 9.4E-12 3.2E-16 105.7 11.4 121 34-161 9-136 (334)
71 2czc_A Glyceraldehyde-3-phosph 99.3 1.3E-11 4.3E-16 104.1 10.6 96 35-139 2-112 (334)
72 1nvm_B Acetaldehyde dehydrogen 99.2 6.3E-11 2.2E-15 99.3 9.5 98 34-139 3-106 (312)
73 1b7g_O Protein (glyceraldehyde 99.1 1.9E-10 6.7E-15 97.4 10.7 93 35-136 1-107 (340)
74 2fp4_A Succinyl-COA ligase [GD 99.1 5.6E-10 1.9E-14 93.4 13.2 112 36-161 14-128 (305)
75 2g0t_A Conserved hypothetical 99.1 1.8E-10 6.1E-15 98.4 9.3 116 35-159 22-147 (350)
76 1cf2_P Protein (glyceraldehyde 99.1 1.1E-10 3.6E-15 98.9 7.4 96 35-139 1-111 (337)
77 2obn_A Hypothetical protein; s 99.1 2.2E-10 7.4E-15 97.8 7.5 113 36-158 8-129 (349)
78 3dr3_A N-acetyl-gamma-glutamyl 99.0 1.1E-09 3.8E-14 92.9 11.0 101 33-140 2-109 (337)
79 2ep5_A 350AA long hypothetical 99.0 3.2E-09 1.1E-13 90.0 11.0 99 34-139 3-110 (350)
80 2ozp_A N-acetyl-gamma-glutamyl 99.0 3.8E-09 1.3E-13 89.5 11.0 98 35-140 4-102 (345)
81 1r0k_A 1-deoxy-D-xylulose 5-ph 98.9 3.3E-09 1.1E-13 91.6 8.8 122 34-161 3-148 (388)
82 3abi_A Putative uncharacterize 98.9 9.8E-10 3.3E-14 92.9 4.6 112 35-160 16-129 (365)
83 2d59_A Hypothetical protein PH 98.9 1.9E-08 6.4E-13 75.2 10.4 105 35-161 22-129 (144)
84 1y81_A Conserved hypothetical 98.8 2.5E-08 8.6E-13 74.2 10.6 106 34-161 13-121 (138)
85 1ys4_A Aspartate-semialdehyde 98.8 2.1E-08 7.1E-13 85.0 10.3 98 35-137 8-114 (354)
86 2duw_A Putative COA-binding pr 98.8 2.2E-08 7.5E-13 75.0 8.4 107 35-161 13-122 (145)
87 2dt5_A AT-rich DNA-binding pro 98.8 2E-08 6.8E-13 80.0 8.4 92 34-138 79-173 (211)
88 3e5r_O PP38, glyceraldehyde-3- 98.8 1.1E-08 3.9E-13 86.6 7.4 99 35-139 3-127 (337)
89 1xyg_A Putative N-acetyl-gamma 98.8 1.9E-08 6.3E-13 85.8 8.6 97 35-140 16-115 (359)
90 4dpk_A Malonyl-COA/succinyl-CO 98.7 2.7E-08 9.1E-13 85.0 8.7 97 34-137 6-110 (359)
91 4dpl_A Malonyl-COA/succinyl-CO 98.7 2.7E-08 9.1E-13 85.0 8.7 97 34-137 6-110 (359)
92 1vkn_A N-acetyl-gamma-glutamyl 98.7 4E-08 1.4E-12 83.9 9.2 96 34-139 12-109 (351)
93 2yyy_A Glyceraldehyde-3-phosph 98.7 1.7E-08 5.9E-13 85.7 6.4 96 35-139 2-115 (343)
94 3pff_A ATP-citrate synthase; p 98.7 5.5E-08 1.9E-12 90.9 10.0 122 33-161 494-622 (829)
95 2vt3_A REX, redox-sensing tran 98.7 5.2E-08 1.8E-12 77.8 8.5 90 35-138 85-178 (215)
96 1iuk_A Hypothetical protein TT 98.7 5.3E-08 1.8E-12 72.5 7.9 107 35-161 13-122 (140)
97 1u8f_O GAPDH, glyceraldehyde-3 98.7 2.9E-08 1E-12 83.9 7.1 99 35-138 3-124 (335)
98 2r00_A Aspartate-semialdehyde 98.7 6.7E-08 2.3E-12 81.6 8.7 93 34-137 2-96 (336)
99 3hsk_A Aspartate-semialdehyde 98.6 8.4E-08 2.9E-12 82.6 9.1 97 34-138 18-125 (381)
100 3ic5_A Putative saccharopine d 98.6 6.4E-07 2.2E-11 62.1 11.5 106 34-155 4-116 (118)
101 2nqt_A N-acetyl-gamma-glutamyl 98.6 2.2E-07 7.7E-12 79.0 9.7 98 35-140 9-113 (352)
102 2z2v_A Hypothetical protein PH 98.5 7.6E-08 2.6E-12 82.0 5.8 112 34-159 15-128 (365)
103 2ahr_A Putative pyrroline carb 98.5 2.1E-07 7.2E-12 74.3 7.9 99 34-148 2-101 (259)
104 1rm4_O Glyceraldehyde 3-phosph 98.5 2.4E-07 8.3E-12 78.6 8.4 98 35-137 1-122 (337)
105 3pwk_A Aspartate-semialdehyde 98.5 2.9E-07 9.9E-12 78.9 8.9 93 35-139 2-97 (366)
106 3keo_A Redox-sensing transcrip 98.5 3.2E-07 1.1E-11 73.2 8.5 93 34-137 83-179 (212)
107 3d1l_A Putative NADP oxidoredu 98.5 1.4E-07 4.8E-12 75.6 6.2 97 35-144 10-109 (266)
108 1gad_O D-glyceraldehyde-3-phos 98.5 2.9E-07 9.8E-12 77.8 7.9 100 35-138 1-120 (330)
109 4ina_A Saccharopine dehydrogen 98.5 3.6E-07 1.2E-11 78.5 8.4 119 35-159 1-136 (405)
110 3uw3_A Aspartate-semialdehyde 98.5 1.3E-06 4.4E-11 75.2 11.6 93 34-138 3-101 (377)
111 3pzr_A Aspartate-semialdehyde 98.5 1.1E-06 3.9E-11 75.3 11.1 91 36-138 1-97 (370)
112 2hjs_A USG-1 protein homolog; 98.5 3.9E-07 1.3E-11 77.0 8.0 91 35-137 6-99 (340)
113 3cmc_O GAPDH, glyceraldehyde-3 98.5 3.2E-07 1.1E-11 77.7 7.4 99 35-138 1-121 (334)
114 4dll_A 2-hydroxy-3-oxopropiona 98.5 1.5E-06 5.2E-11 72.0 11.3 110 34-159 30-145 (320)
115 3b1j_A Glyceraldehyde 3-phosph 98.4 5.1E-07 1.8E-11 76.6 8.4 94 35-132 2-117 (339)
116 1t4b_A Aspartate-semialdehyde 98.4 1.9E-06 6.6E-11 73.6 12.0 92 35-138 1-98 (367)
117 3tz6_A Aspartate-semialdehyde 98.4 5.4E-07 1.9E-11 76.5 8.4 91 36-138 2-95 (344)
118 3cps_A Glyceraldehyde 3-phosph 98.4 2.9E-07 9.8E-12 78.6 6.7 101 34-138 16-138 (354)
119 4huj_A Uncharacterized protein 98.4 3.5E-07 1.2E-11 71.9 5.8 113 33-158 21-145 (220)
120 1yb4_A Tartronic semialdehyde 98.4 2E-06 6.7E-11 69.5 10.2 108 34-158 2-116 (295)
121 3pef_A 6-phosphogluconate dehy 98.4 3.3E-06 1.1E-10 68.5 11.6 108 36-159 2-116 (287)
122 2x5j_O E4PDH, D-erythrose-4-ph 98.4 8.1E-07 2.8E-11 75.3 8.2 100 35-139 2-126 (339)
123 2ph5_A Homospermidine synthase 98.4 1.2E-06 4.1E-11 77.5 9.3 96 35-135 13-112 (480)
124 3ff4_A Uncharacterized protein 98.4 5.9E-07 2E-11 65.8 6.1 106 33-161 2-110 (122)
125 2uyy_A N-PAC protein; long-cha 98.4 2.2E-06 7.5E-11 70.3 10.2 107 35-157 30-143 (316)
126 2d2i_A Glyceraldehyde 3-phosph 98.4 8.9E-07 3E-11 76.3 7.9 94 35-132 2-117 (380)
127 3doj_A AT3G25530, dehydrogenas 98.4 4E-06 1.4E-10 69.1 11.3 112 32-159 18-136 (310)
128 3qsg_A NAD-binding phosphogluc 98.3 2.5E-06 8.6E-11 70.5 10.1 108 34-155 23-134 (312)
129 4e21_A 6-phosphogluconate dehy 98.3 6E-06 2.1E-10 70.1 12.6 112 35-159 22-136 (358)
130 2gf2_A Hibadh, 3-hydroxyisobut 98.3 3.3E-06 1.1E-10 68.3 9.9 107 36-158 1-114 (296)
131 3cky_A 2-hydroxymethyl glutara 98.3 5E-06 1.7E-10 67.4 10.9 107 35-157 4-117 (301)
132 3a06_A 1-deoxy-D-xylulose 5-ph 98.3 1.7E-06 5.8E-11 74.3 8.3 115 36-158 4-137 (376)
133 3obb_A Probable 3-hydroxyisobu 98.3 5.9E-06 2E-10 68.5 10.8 108 35-159 3-118 (300)
134 1hdg_O Holo-D-glyceraldehyde-3 98.3 1.7E-06 5.8E-11 73.2 7.4 95 36-135 1-119 (332)
135 2h78_A Hibadh, 3-hydroxyisobut 98.3 5.1E-06 1.7E-10 67.7 9.7 108 34-157 2-116 (302)
136 2csu_A 457AA long hypothetical 98.2 3.6E-06 1.2E-10 73.6 9.0 109 35-161 8-126 (457)
137 4gbj_A 6-phosphogluconate dehy 98.2 1.3E-05 4.4E-10 66.2 11.7 108 36-159 6-118 (297)
138 1vpd_A Tartronate semialdehyde 98.2 8.5E-06 2.9E-10 65.9 10.2 107 36-158 6-119 (299)
139 3l6d_A Putative oxidoreductase 98.2 1.2E-05 4.1E-10 66.2 10.8 113 31-159 5-122 (306)
140 1gr0_A Inositol-3-phosphate sy 98.2 3.3E-05 1.1E-09 66.1 13.4 125 32-162 12-196 (367)
141 3nkl_A UDP-D-quinovosamine 4-d 98.2 1.6E-05 5.4E-10 57.6 10.0 90 33-135 2-97 (141)
142 2axq_A Saccharopine dehydrogen 98.2 1.2E-05 4.2E-10 70.5 11.0 111 34-159 22-139 (467)
143 3pdu_A 3-hydroxyisobutyrate de 98.2 1E-05 3.5E-10 65.6 9.5 109 35-159 1-116 (287)
144 1i36_A Conserved hypothetical 98.1 1.4E-05 4.9E-10 63.6 10.1 105 36-155 1-105 (264)
145 3qha_A Putative oxidoreductase 98.1 4.7E-05 1.6E-09 62.2 12.5 108 35-159 15-126 (296)
146 3tri_A Pyrroline-5-carboxylate 98.1 3.4E-05 1.2E-09 62.9 11.5 108 35-159 3-118 (280)
147 2cvz_A Dehydrogenase, 3-hydrox 98.1 2.1E-05 7E-10 63.1 9.7 107 35-159 1-111 (289)
148 3g0o_A 3-hydroxyisobutyrate de 98.0 1.9E-05 6.4E-10 64.6 9.1 109 34-158 6-122 (303)
149 3gt0_A Pyrroline-5-carboxylate 98.0 8.7E-06 3E-10 64.7 6.7 98 35-146 2-106 (247)
150 3pid_A UDP-glucose 6-dehydroge 98.0 9.5E-05 3.2E-09 64.5 12.9 136 12-161 8-176 (432)
151 1jay_A Coenzyme F420H2:NADP+ o 98.0 1.9E-05 6.6E-10 60.7 7.7 96 36-141 1-101 (212)
152 1obf_O Glyceraldehyde 3-phosph 98.0 2.3E-05 8E-10 66.4 8.7 96 35-135 1-121 (335)
153 1ff9_A Saccharopine reductase; 98.0 4E-05 1.4E-09 66.8 10.2 109 35-159 3-119 (450)
154 4ezb_A Uncharacterized conserv 97.9 4.5E-05 1.5E-09 63.2 9.6 108 34-157 23-140 (317)
155 2g82_O GAPDH, glyceraldehyde-3 97.9 1.9E-05 6.6E-10 66.7 7.2 98 36-139 1-120 (331)
156 2izz_A Pyrroline-5-carboxylate 97.9 7.8E-05 2.7E-09 61.7 10.2 99 35-146 22-127 (322)
157 3r6d_A NAD-dependent epimerase 97.9 5.1E-05 1.7E-09 58.4 8.4 91 34-134 3-104 (221)
158 3ggo_A Prephenate dehydrogenas 97.9 0.00017 5.9E-09 59.8 12.2 102 35-152 33-142 (314)
159 2rcy_A Pyrroline carboxylate r 97.9 5.5E-05 1.9E-09 59.9 8.7 93 35-147 4-101 (262)
160 2b4r_O Glyceraldehyde-3-phosph 97.9 2.8E-05 9.5E-10 66.2 7.3 100 35-138 11-132 (345)
161 3b1f_A Putative prephenate deh 97.9 9.5E-05 3.2E-09 59.6 10.1 105 35-153 6-116 (290)
162 3e48_A Putative nucleoside-dip 97.9 8.5E-05 2.9E-09 59.2 9.6 86 36-134 1-102 (289)
163 2ep7_A GAPDH, glyceraldehyde-3 97.9 1.6E-05 5.5E-10 67.6 5.5 99 35-137 2-121 (342)
164 2yv3_A Aspartate-semialdehyde 97.8 2.5E-05 8.6E-10 65.7 6.4 90 36-138 1-93 (331)
165 2iz1_A 6-phosphogluconate dehy 97.8 9.1E-05 3.1E-09 64.7 9.8 116 35-159 5-124 (474)
166 3pym_A GAPDH 3, glyceraldehyde 97.8 7.5E-05 2.6E-09 63.2 8.7 99 35-138 1-122 (332)
167 2i76_A Hypothetical protein; N 97.8 2.2E-06 7.4E-11 69.5 -0.9 93 35-143 2-95 (276)
168 3lvf_P GAPDH 1, glyceraldehyde 97.8 0.00012 4E-09 62.1 9.7 100 33-137 2-123 (338)
169 3dtt_A NADP oxidoreductase; st 97.8 0.00021 7.1E-09 56.8 10.7 95 30-137 14-124 (245)
170 2pgd_A 6-phosphogluconate dehy 97.8 0.00019 6.4E-09 62.9 11.3 113 36-157 3-120 (482)
171 3dhn_A NAD-dependent epimerase 97.8 9.9E-05 3.4E-09 56.6 8.4 92 34-134 3-108 (227)
172 2vns_A Metalloreductase steap3 97.8 0.00013 4.5E-09 57.0 8.9 97 31-144 24-122 (215)
173 4dib_A GAPDH, glyceraldehyde 3 97.7 7.5E-05 2.6E-09 63.5 7.7 101 33-138 2-124 (345)
174 2g5c_A Prephenate dehydrogenas 97.7 0.00037 1.3E-08 55.8 11.5 103 35-153 1-111 (281)
175 2i99_A MU-crystallin homolog; 97.7 8.4E-06 2.9E-10 67.6 1.8 88 34-135 134-224 (312)
176 3k96_A Glycerol-3-phosphate de 97.7 0.00017 6E-09 60.9 9.5 101 34-143 28-139 (356)
177 3dqp_A Oxidoreductase YLBE; al 97.7 0.00012 4.1E-09 56.2 7.6 86 36-134 1-102 (219)
178 2zyd_A 6-phosphogluconate dehy 97.7 0.00026 9E-09 62.1 10.8 114 35-157 15-132 (480)
179 2p4q_A 6-phosphogluconate dehy 97.7 0.0004 1.4E-08 61.3 11.8 113 36-157 11-128 (497)
180 3c24_A Putative oxidoreductase 97.7 7.1E-05 2.4E-09 60.5 6.3 91 35-140 11-104 (286)
181 2f1k_A Prephenate dehydrogenas 97.6 0.0005 1.7E-08 54.9 10.9 99 36-151 1-104 (279)
182 3h9e_O Glyceraldehyde-3-phosph 97.6 0.00018 6.2E-09 61.2 8.6 100 33-138 5-127 (346)
183 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.6 0.00027 9.2E-09 61.9 9.6 114 36-158 2-123 (478)
184 3slg_A PBGP3 protein; structur 97.6 0.00025 8.6E-09 58.4 9.0 35 35-69 24-58 (372)
185 3v1y_O PP38, glyceraldehyde-3- 97.5 0.00011 3.8E-09 62.3 6.1 99 35-138 3-126 (337)
186 3doc_A Glyceraldehyde 3-phosph 97.5 0.00028 9.7E-09 59.7 8.5 99 35-138 2-124 (335)
187 3qvo_A NMRA family protein; st 97.5 0.00039 1.3E-08 54.1 8.7 90 32-134 20-121 (236)
188 1evy_A Glycerol-3-phosphate de 97.5 0.0002 7E-09 59.7 7.4 97 36-143 16-130 (366)
189 4gwg_A 6-phosphogluconate dehy 97.5 0.0013 4.5E-08 58.0 12.5 116 34-158 3-123 (484)
190 2pv7_A T-protein [includes: ch 97.5 0.002 7E-08 52.5 12.8 90 34-151 20-112 (298)
191 3oj0_A Glutr, glutamyl-tRNA re 97.5 8.7E-05 3E-09 54.0 3.9 87 35-134 21-107 (144)
192 3m2p_A UDP-N-acetylglucosamine 97.5 0.00041 1.4E-08 55.8 8.2 88 35-134 2-105 (311)
193 1z82_A Glycerol-3-phosphate de 97.4 0.0001 3.4E-09 61.0 4.5 98 34-143 13-117 (335)
194 3sc6_A DTDP-4-dehydrorhamnose 97.4 0.00022 7.4E-09 56.6 6.1 79 36-134 6-102 (287)
195 1yj8_A Glycerol-3-phosphate de 97.4 0.00021 7.1E-09 60.0 6.2 116 10-142 4-146 (375)
196 3gg2_A Sugar dehydrogenase, UD 97.4 0.0016 5.5E-08 56.6 11.9 92 36-138 3-123 (450)
197 1vl0_A DTDP-4-dehydrorhamnose 97.4 0.00037 1.3E-08 55.4 7.2 85 31-135 8-110 (292)
198 1yqg_A Pyrroline-5-carboxylate 97.4 0.00018 6E-09 57.0 5.3 100 36-153 1-101 (263)
199 4egb_A DTDP-glucose 4,6-dehydr 97.4 0.0019 6.4E-08 52.4 11.4 35 34-68 23-58 (346)
200 3i6i_A Putative leucoanthocyan 97.3 0.00072 2.5E-08 55.4 8.1 95 35-135 10-116 (346)
201 1bg6_A N-(1-D-carboxylethyl)-L 97.3 0.00062 2.1E-08 55.9 7.7 95 35-139 4-110 (359)
202 4a7p_A UDP-glucose dehydrogena 97.3 0.002 6.9E-08 56.1 11.3 108 34-153 7-144 (446)
203 4e12_A Diketoreductase; oxidor 97.3 0.0011 3.8E-08 53.6 9.1 102 35-145 4-129 (283)
204 1hdo_A Biliverdin IX beta redu 97.3 0.001 3.4E-08 49.7 8.2 85 36-134 4-107 (206)
205 3h2s_A Putative NADH-flavin re 97.3 0.00084 2.9E-08 51.1 7.6 87 36-136 1-103 (224)
206 2o3j_A UDP-glucose 6-dehydroge 97.3 0.0029 9.9E-08 55.3 11.8 73 32-114 6-94 (481)
207 3e8x_A Putative NAD-dependent 97.3 0.00097 3.3E-08 51.6 7.8 89 35-135 21-128 (236)
208 2x4g_A Nucleoside-diphosphate- 97.3 0.0012 4.1E-08 53.3 8.7 34 35-69 13-46 (342)
209 3c1o_A Eugenol synthase; pheny 97.2 0.00082 2.8E-08 54.1 7.7 95 33-135 2-110 (321)
210 1np3_A Ketol-acid reductoisome 97.2 0.00038 1.3E-08 58.1 5.8 90 35-140 16-109 (338)
211 2r6j_A Eugenol synthase 1; phe 97.2 0.001 3.5E-08 53.6 8.2 90 35-135 11-112 (318)
212 4fgw_A Glycerol-3-phosphate de 97.2 0.0016 5.3E-08 56.2 9.6 122 11-141 7-155 (391)
213 2qyt_A 2-dehydropantoate 2-red 97.2 0.0007 2.4E-08 54.7 7.1 106 33-152 6-130 (317)
214 2ew2_A 2-dehydropantoate 2-red 97.2 0.00078 2.7E-08 54.0 7.3 111 34-155 2-124 (316)
215 2y1e_A 1-deoxy-D-xylulose 5-ph 97.2 0.0017 5.9E-08 55.9 9.7 114 35-156 21-155 (398)
216 2gas_A Isoflavone reductase; N 97.2 0.00069 2.4E-08 54.0 6.7 93 35-135 2-109 (307)
217 1xq6_A Unknown protein; struct 97.2 0.00081 2.8E-08 51.7 6.9 35 34-68 3-38 (253)
218 2zcu_A Uncharacterized oxidore 97.2 0.00082 2.8E-08 52.9 6.9 85 37-134 1-100 (286)
219 1oc2_A DTDP-glucose 4,6-dehydr 97.2 0.0032 1.1E-07 51.0 10.5 34 35-68 4-38 (348)
220 3sxp_A ADP-L-glycero-D-mannohe 97.2 0.0032 1.1E-07 51.7 10.6 35 34-68 9-44 (362)
221 3ids_C GAPDH, glyceraldehyde-3 97.2 0.0004 1.4E-08 59.3 5.2 97 35-136 2-134 (359)
222 3hja_A GAPDH, glyceraldehyde-3 97.2 0.00012 4.2E-09 62.4 2.0 102 32-139 18-146 (356)
223 4id9_A Short-chain dehydrogena 97.2 0.0018 6E-08 52.7 8.8 88 34-134 18-122 (347)
224 1qyc_A Phenylcoumaran benzylic 97.2 0.0015 5E-08 52.1 8.2 93 35-135 4-110 (308)
225 1f0y_A HCDH, L-3-hydroxyacyl-C 97.2 0.0019 6.6E-08 52.4 9.0 33 35-70 15-47 (302)
226 3ew7_A LMO0794 protein; Q8Y8U8 97.1 0.00094 3.2E-08 50.5 6.6 33 36-69 1-33 (221)
227 1rpn_A GDP-mannose 4,6-dehydra 97.1 0.002 6.9E-08 51.9 9.0 39 30-69 9-47 (335)
228 3ruf_A WBGU; rossmann fold, UD 97.1 0.0024 8.2E-08 51.9 9.4 35 34-69 24-58 (351)
229 2b69_A UDP-glucuronate decarbo 97.1 0.0017 5.9E-08 52.8 8.5 36 32-68 24-59 (343)
230 3ktd_A Prephenate dehydrogenas 97.1 0.0021 7.1E-08 54.2 9.1 106 35-152 8-115 (341)
231 1qyd_A Pinoresinol-lariciresin 97.1 0.0017 5.7E-08 51.9 8.1 93 35-135 4-113 (313)
232 2jl1_A Triphenylmethane reduct 97.1 0.001 3.5E-08 52.5 6.7 86 36-134 1-103 (287)
233 1dlj_A UDP-glucose dehydrogena 97.1 0.007 2.4E-07 51.6 12.4 113 36-161 1-140 (402)
234 3c85_A Putative glutathione-re 97.1 0.0045 1.5E-07 46.3 10.0 107 35-151 39-151 (183)
235 2bll_A Protein YFBG; decarboxy 97.1 0.0027 9.2E-08 51.2 9.3 33 36-68 1-33 (345)
236 1jw9_B Molybdopterin biosynthe 97.1 0.0016 5.6E-08 52.1 7.8 95 35-137 31-153 (249)
237 3c7a_A Octopine dehydrogenase; 97.1 0.0034 1.2E-07 52.9 10.2 91 35-135 2-114 (404)
238 4b8w_A GDP-L-fucose synthase; 97.1 0.0032 1.1E-07 49.6 9.4 30 30-59 1-30 (319)
239 4dgs_A Dehydrogenase; structur 97.1 0.0027 9.4E-08 53.5 9.4 121 13-154 146-274 (340)
240 3fr7_A Putative ketol-acid red 97.1 0.0011 3.8E-08 59.0 7.3 110 36-159 55-177 (525)
241 2tmg_A Protein (glutamate dehy 97.1 0.0028 9.7E-08 55.0 9.7 113 34-160 208-335 (415)
242 2gcg_A Glyoxylate reductase/hy 97.1 0.0024 8E-08 53.2 8.9 111 13-139 129-248 (330)
243 2yy7_A L-threonine dehydrogena 97.1 0.002 6.7E-08 51.4 8.0 34 35-68 2-36 (312)
244 2wm3_A NMRA-like family domain 97.1 0.0036 1.2E-07 49.9 9.5 90 35-135 5-112 (299)
245 2q1s_A Putative nucleotide sug 97.1 0.0013 4.5E-08 54.5 7.2 35 33-68 30-65 (377)
246 2raf_A Putative dinucleotide-b 97.0 0.0032 1.1E-07 48.8 8.9 75 33-141 17-94 (209)
247 1x7d_A Ornithine cyclodeaminas 97.0 0.00016 5.4E-09 61.2 1.4 93 35-136 129-225 (350)
248 3ba1_A HPPR, hydroxyphenylpyru 97.0 0.0033 1.1E-07 52.7 9.4 86 34-139 163-253 (333)
249 2w2k_A D-mandelate dehydrogena 97.0 0.0019 6.4E-08 54.4 8.0 69 34-116 162-230 (348)
250 2ydy_A Methionine adenosyltran 97.0 0.0023 7.9E-08 51.2 8.2 86 36-134 3-106 (315)
251 1x0v_A GPD-C, GPDH-C, glycerol 97.0 0.0023 8E-08 52.7 8.4 98 35-141 8-128 (354)
252 2c5a_A GDP-mannose-3', 5'-epim 97.0 0.0049 1.7E-07 51.1 10.4 36 33-69 27-62 (379)
253 1qp8_A Formate dehydrogenase; 97.0 0.0016 5.4E-08 53.9 7.3 79 15-114 104-182 (303)
254 1vjp_A MYO-inositol-1-phosphat 97.0 0.0037 1.3E-07 53.8 9.6 126 34-162 12-219 (394)
255 2ekl_A D-3-phosphoglycerate de 97.0 0.0018 6.3E-08 53.6 7.6 124 15-157 123-251 (313)
256 2j6i_A Formate dehydrogenase; 97.0 0.0012 4E-08 56.1 6.3 129 13-157 139-276 (364)
257 1n2s_A DTDP-4-, DTDP-glucose o 97.0 0.0016 5.4E-08 51.7 6.7 82 36-134 1-100 (299)
258 3g79_A NDP-N-acetyl-D-galactos 97.0 0.0064 2.2E-07 53.5 11.2 35 34-70 17-52 (478)
259 2rh8_A Anthocyanidin reductase 97.0 0.0024 8.1E-08 51.7 7.9 38 31-69 5-42 (338)
260 2dpo_A L-gulonate 3-dehydrogen 97.0 0.0029 9.8E-08 52.7 8.5 102 34-144 5-130 (319)
261 2q3e_A UDP-glucose 6-dehydroge 97.0 0.0025 8.7E-08 55.3 8.5 70 35-114 5-90 (467)
262 3cin_A MYO-inositol-1-phosphat 97.0 0.0062 2.1E-07 52.6 10.7 128 33-162 11-219 (394)
263 1txg_A Glycerol-3-phosphate de 97.0 0.0015 5.2E-08 53.2 6.5 94 36-140 1-107 (335)
264 2d0i_A Dehydrogenase; structur 96.9 0.0016 5.5E-08 54.5 6.7 86 34-138 145-235 (333)
265 1mx3_A CTBP1, C-terminal bindi 96.9 0.0037 1.3E-07 52.7 8.9 67 34-116 167-233 (347)
266 3ehe_A UDP-glucose 4-epimerase 96.9 0.0038 1.3E-07 50.0 8.6 70 35-114 1-71 (313)
267 1mv8_A GMD, GDP-mannose 6-dehy 96.9 0.0078 2.7E-07 51.7 11.0 68 36-114 1-84 (436)
268 3gvx_A Glycerate dehydrogenase 96.9 0.0016 5.6E-08 53.7 6.3 102 13-135 101-207 (290)
269 2d5c_A AROE, shikimate 5-dehyd 96.9 0.00026 9E-09 56.7 1.3 104 37-159 118-225 (263)
270 4g2n_A D-isomer specific 2-hyd 96.9 0.0035 1.2E-07 53.0 8.3 85 13-114 147-235 (345)
271 1q0q_A 1-deoxy-D-xylulose 5-ph 96.9 0.0047 1.6E-07 53.4 9.1 105 31-137 5-132 (406)
272 1e6u_A GDP-fucose synthetase; 96.8 0.0039 1.3E-07 49.9 8.1 61 35-114 3-63 (321)
273 3aog_A Glutamate dehydrogenase 96.8 0.0024 8.3E-08 55.8 7.2 113 34-160 234-360 (440)
274 3enk_A UDP-glucose 4-epimerase 96.8 0.0055 1.9E-07 49.4 8.9 33 35-68 5-37 (341)
275 3gpi_A NAD-dependent epimerase 96.8 0.0027 9.3E-08 50.3 6.9 33 35-69 3-35 (286)
276 3jtm_A Formate dehydrogenase, 96.8 0.0025 8.6E-08 53.9 7.0 87 34-135 163-254 (351)
277 2c20_A UDP-glucose 4-epimerase 96.8 0.0056 1.9E-07 49.2 8.8 33 35-68 1-33 (330)
278 2g1u_A Hypothetical protein TM 96.8 0.011 3.9E-07 43.1 9.7 104 36-150 20-129 (155)
279 3dmy_A Protein FDRA; predicted 96.8 0.0043 1.5E-07 54.8 8.6 74 85-161 18-91 (480)
280 1gdh_A D-glycerate dehydrogena 96.8 0.0024 8.4E-08 53.1 6.6 87 13-115 120-211 (320)
281 1omo_A Alanine dehydrogenase; 96.8 0.00037 1.3E-08 58.0 1.5 89 35-136 125-216 (322)
282 3hwr_A 2-dehydropantoate 2-red 96.8 0.0058 2E-07 50.2 8.8 111 29-152 13-133 (318)
283 3oh8_A Nucleoside-diphosphate 96.8 0.0058 2E-07 53.3 9.1 37 32-69 143-180 (516)
284 2q1w_A Putative nucleotide sug 96.7 0.0073 2.5E-07 49.0 9.1 34 34-68 20-53 (333)
285 1sb8_A WBPP; epimerase, 4-epim 96.7 0.0079 2.7E-07 49.0 9.2 34 34-68 26-59 (352)
286 3ius_A Uncharacterized conserv 96.7 0.0075 2.6E-07 47.5 8.8 34 34-69 4-37 (286)
287 2bka_A CC3, TAT-interacting pr 96.7 0.012 4E-07 45.2 9.8 32 36-68 19-52 (242)
288 2hk9_A Shikimate dehydrogenase 96.7 0.0029 9.8E-08 51.1 6.3 70 35-118 129-198 (275)
289 2x6t_A ADP-L-glycero-D-manno-h 96.7 0.0073 2.5E-07 49.3 8.9 32 36-68 47-79 (357)
290 2y0c_A BCEC, UDP-glucose dehyd 96.7 0.0073 2.5E-07 52.9 9.3 70 34-114 7-92 (478)
291 1ks9_A KPA reductase;, 2-dehyd 96.7 0.0086 3E-07 47.4 9.0 94 36-142 1-102 (291)
292 3hg7_A D-isomer specific 2-hyd 96.7 0.0034 1.2E-07 52.6 6.9 85 12-114 118-202 (324)
293 1z7e_A Protein aRNA; rossmann 96.7 0.0087 3E-07 53.7 10.0 36 34-69 314-349 (660)
294 2dbq_A Glyoxylate reductase; D 96.7 0.0029 1E-07 52.8 6.5 89 34-139 149-242 (334)
295 1zud_1 Adenylyltransferase THI 96.7 0.0094 3.2E-07 47.7 9.2 95 35-137 28-150 (251)
296 3eag_A UDP-N-acetylmuramate:L- 96.7 0.017 5.7E-07 47.7 11.0 89 33-135 2-95 (326)
297 3fwz_A Inner membrane protein 96.7 0.018 6E-07 41.5 9.8 107 33-151 5-117 (140)
298 1kew_A RMLB;, DTDP-D-glucose 4 96.7 0.015 5E-07 47.3 10.4 33 36-68 1-33 (361)
299 1eq2_A ADP-L-glycero-D-mannohe 96.7 0.0077 2.6E-07 47.7 8.6 31 37-68 1-32 (310)
300 1orr_A CDP-tyvelose-2-epimeras 96.7 0.0067 2.3E-07 48.9 8.3 33 35-68 1-33 (347)
301 1t2a_A GDP-mannose 4,6 dehydra 96.7 0.0082 2.8E-07 49.3 8.9 33 36-69 25-57 (375)
302 1wwk_A Phosphoglycerate dehydr 96.7 0.0049 1.7E-07 51.0 7.5 85 34-135 141-230 (307)
303 4b4o_A Epimerase family protei 96.6 0.002 6.7E-08 51.5 4.8 33 36-69 1-33 (298)
304 3pp8_A Glyoxylate/hydroxypyruv 96.6 0.0026 9E-08 53.0 5.7 84 13-114 118-201 (315)
305 3rui_A Ubiquitin-like modifier 96.6 0.009 3.1E-07 50.6 8.9 98 35-140 34-174 (340)
306 1r6d_A TDP-glucose-4,6-dehydra 96.6 0.03 1E-06 45.1 11.8 33 36-68 1-38 (337)
307 2yjz_A Metalloreductase steap4 95.6 0.00033 1.1E-08 54.5 0.0 92 33-141 17-109 (201)
308 2hun_A 336AA long hypothetical 96.6 0.027 9.1E-07 45.2 11.2 33 36-68 4-37 (336)
309 2pzm_A Putative nucleotide sug 96.6 0.013 4.6E-07 47.4 9.4 33 35-68 20-52 (330)
310 3st7_A Capsular polysaccharide 96.6 0.0038 1.3E-07 51.5 6.2 72 36-132 1-86 (369)
311 1v9l_A Glutamate dehydrogenase 96.5 0.0044 1.5E-07 53.9 6.8 112 35-160 210-341 (421)
312 1leh_A Leucine dehydrogenase; 96.5 0.0031 1.1E-07 53.7 5.7 110 34-161 172-282 (364)
313 1ek6_A UDP-galactose 4-epimera 96.5 0.012 4.2E-07 47.5 9.0 33 35-68 2-34 (348)
314 1smk_A Malate dehydrogenase, g 96.5 0.0082 2.8E-07 49.9 8.1 74 34-114 7-84 (326)
315 2yfq_A Padgh, NAD-GDH, NAD-spe 96.5 0.0024 8.3E-08 55.5 5.0 112 35-160 212-342 (421)
316 2ggs_A 273AA long hypothetical 96.5 0.0078 2.7E-07 46.9 7.5 86 36-135 1-104 (273)
317 3i83_A 2-dehydropantoate 2-red 96.5 0.0045 1.5E-07 50.8 6.4 111 35-158 2-124 (320)
318 3ay3_A NAD-dependent epimerase 96.5 0.0057 1.9E-07 48.0 6.5 33 35-68 2-34 (267)
319 2bma_A Glutamate dehydrogenase 96.5 0.012 4E-07 51.9 9.1 114 35-160 252-388 (470)
320 2gn4_A FLAA1 protein, UDP-GLCN 96.5 0.0081 2.8E-07 49.5 7.7 32 36-67 22-54 (344)
321 3d4o_A Dipicolinate synthase s 96.5 0.0044 1.5E-07 50.4 6.0 86 34-134 154-241 (293)
322 1zej_A HBD-9, 3-hydroxyacyl-CO 96.5 0.0077 2.6E-07 49.7 7.4 96 36-145 13-115 (293)
323 2nac_A NAD-dependent formate d 96.5 0.0051 1.7E-07 52.9 6.5 67 34-115 190-256 (393)
324 3vps_A TUNA, NAD-dependent epi 96.5 0.011 3.6E-07 47.0 8.0 34 34-68 6-39 (321)
325 1lss_A TRK system potassium up 96.4 0.017 5.9E-07 40.4 8.2 96 35-140 4-105 (140)
326 3k92_A NAD-GDH, NAD-specific g 96.4 0.011 3.7E-07 51.5 8.4 114 34-161 220-346 (424)
327 2rir_A Dipicolinate synthase, 96.4 0.0034 1.2E-07 51.2 5.0 86 34-134 156-243 (300)
328 3hn2_A 2-dehydropantoate 2-red 96.4 0.011 3.7E-07 48.3 8.0 110 35-158 2-122 (312)
329 3k6j_A Protein F01G10.3, confi 96.4 0.0087 3E-07 52.5 7.8 37 31-70 50-86 (460)
330 3rft_A Uronate dehydrogenase; 96.4 0.01 3.4E-07 46.9 7.5 32 35-67 3-34 (267)
331 3evt_A Phosphoglycerate dehydr 96.4 0.0068 2.3E-07 50.7 6.8 82 16-114 118-199 (324)
332 3ajr_A NDP-sugar epimerase; L- 96.4 0.0095 3.3E-07 47.5 7.4 69 37-114 1-70 (317)
333 3d7l_A LIN1944 protein; APC893 96.4 0.006 2E-07 45.8 5.8 64 35-114 3-66 (202)
334 1dxy_A D-2-hydroxyisocaproate 96.4 0.01 3.5E-07 49.5 7.7 103 35-157 145-252 (333)
335 1gy8_A UDP-galactose 4-epimera 96.3 0.018 6.3E-07 47.4 9.2 33 36-68 3-35 (397)
336 3gg9_A D-3-phosphoglycerate de 96.3 0.0027 9.3E-08 53.7 3.7 64 35-114 160-223 (352)
337 4e5n_A Thermostable phosphite 96.3 0.006 2.1E-07 51.0 5.8 65 34-114 144-208 (330)
338 3aoe_E Glutamate dehydrogenase 96.2 0.011 3.6E-07 51.4 7.4 113 34-160 217-339 (419)
339 2g76_A 3-PGDH, D-3-phosphoglyc 96.2 0.013 4.5E-07 49.1 7.8 86 13-115 142-228 (335)
340 3llv_A Exopolyphosphatase-rela 96.2 0.0045 1.5E-07 44.3 4.2 106 34-151 5-115 (141)
341 4ea9_A Perosamine N-acetyltran 96.2 0.041 1.4E-06 42.5 10.1 84 34-133 11-98 (220)
342 2pk3_A GDP-6-deoxy-D-LYXO-4-he 96.2 0.018 6.2E-07 45.9 8.2 34 34-68 11-44 (321)
343 3ko8_A NAD-dependent epimerase 96.2 0.018 6.1E-07 45.8 8.1 32 36-68 1-32 (312)
344 1zcj_A Peroxisomal bifunctiona 96.2 0.032 1.1E-06 48.5 10.3 37 31-70 33-69 (463)
345 3un1_A Probable oxidoreductase 96.2 0.014 4.9E-07 46.2 7.5 58 9-68 2-60 (260)
346 3au8_A 1-deoxy-D-xylulose 5-ph 96.2 0.028 9.6E-07 49.5 9.8 121 34-155 76-222 (488)
347 1xgk_A Nitrogen metabolite rep 96.2 0.018 6E-07 47.8 8.2 89 35-134 5-109 (352)
348 2hmt_A YUAA protein; RCK, KTN, 96.2 0.0099 3.4E-07 41.8 5.8 104 35-150 6-115 (144)
349 1ygy_A PGDH, D-3-phosphoglycer 96.2 0.012 4.2E-07 52.0 7.6 67 34-117 141-207 (529)
350 2v6g_A Progesterone 5-beta-red 96.2 0.019 6.6E-07 46.5 8.2 33 36-69 2-39 (364)
351 2hrz_A AGR_C_4963P, nucleoside 96.2 0.03 1E-06 45.2 9.3 35 34-68 13-53 (342)
352 1bgv_A Glutamate dehydrogenase 96.2 0.012 4.2E-07 51.5 7.3 116 34-160 229-367 (449)
353 1sc6_A PGDH, D-3-phosphoglycer 96.1 0.025 8.4E-07 48.6 9.2 101 34-154 144-249 (404)
354 1j4a_A D-LDH, D-lactate dehydr 96.1 0.0083 2.8E-07 50.1 6.0 104 35-157 146-254 (333)
355 2pi1_A D-lactate dehydrogenase 96.1 0.012 4.2E-07 49.2 7.0 85 12-114 116-202 (334)
356 2z1m_A GDP-D-mannose dehydrata 96.1 0.022 7.6E-07 45.6 8.3 32 36-68 4-35 (345)
357 2p5y_A UDP-glucose 4-epimerase 96.1 0.026 9E-07 44.9 8.6 30 36-66 1-30 (311)
358 1db3_A GDP-mannose 4,6-dehydra 96.1 0.023 7.8E-07 46.3 8.4 33 35-68 1-33 (372)
359 2c07_A 3-oxoacyl-(acyl-carrier 96.1 0.046 1.6E-06 43.5 10.0 32 36-69 45-76 (285)
360 4gsl_A Ubiquitin-like modifier 96.1 0.015 5E-07 52.9 7.7 98 35-140 326-466 (615)
361 3h8v_A Ubiquitin-like modifier 96.1 0.024 8.3E-07 46.8 8.4 56 13-70 8-69 (292)
362 3k5p_A D-3-phosphoglycerate de 96.1 0.029 1E-06 48.6 9.3 103 34-156 155-262 (416)
363 3hdj_A Probable ornithine cycl 96.0 0.012 4E-07 48.9 6.3 87 35-134 121-210 (313)
364 3u62_A Shikimate dehydrogenase 96.0 0.0098 3.4E-07 47.9 5.5 66 37-115 110-175 (253)
365 1xdw_A NAD+-dependent (R)-2-hy 95.9 0.02 6.9E-07 47.7 7.5 125 13-157 122-253 (331)
366 4h7p_A Malate dehydrogenase; s 95.9 0.013 4.5E-07 49.5 6.3 91 11-114 4-108 (345)
367 4f6c_A AUSA reductase domain p 95.9 0.016 5.5E-07 48.7 6.9 38 31-69 65-102 (427)
368 3vtf_A UDP-glucose 6-dehydroge 95.9 0.057 1.9E-06 47.1 10.5 106 33-148 19-158 (444)
369 2p4h_X Vestitone reductase; NA 95.9 0.027 9.2E-07 44.9 7.8 32 36-68 2-33 (322)
370 2c29_D Dihydroflavonol 4-reduc 95.9 0.016 5.4E-07 46.8 6.5 34 35-69 5-38 (337)
371 3h5n_A MCCB protein; ubiquitin 95.9 0.028 9.7E-07 47.3 8.2 93 35-136 118-240 (353)
372 4dyv_A Short-chain dehydrogena 95.9 0.024 8.3E-07 45.3 7.5 54 13-69 5-60 (272)
373 4da9_A Short-chain dehydrogena 95.9 0.11 3.6E-06 41.5 11.3 48 19-67 13-60 (280)
374 2cuk_A Glycerate dehydrogenase 95.9 0.019 6.3E-07 47.5 6.9 60 34-115 143-202 (311)
375 1udb_A Epimerase, UDP-galactos 95.8 0.05 1.7E-06 43.7 9.2 31 36-67 1-31 (338)
376 3l9w_A Glutathione-regulated p 95.8 0.045 1.6E-06 47.0 9.4 106 35-152 4-115 (413)
377 3l4b_C TRKA K+ channel protien 95.8 0.02 6.9E-07 44.0 6.5 105 36-151 1-111 (218)
378 3mog_A Probable 3-hydroxybutyr 95.8 0.017 5.7E-07 50.8 6.7 33 35-70 5-37 (483)
379 1rkx_A CDP-glucose-4,6-dehydra 95.8 0.028 9.6E-07 45.7 7.7 34 35-69 9-42 (357)
380 2a35_A Hypothetical protein PA 95.8 0.033 1.1E-06 41.7 7.5 34 35-68 5-39 (215)
381 4hy3_A Phosphoglycerate oxidor 95.8 0.022 7.4E-07 48.5 7.0 63 35-114 176-238 (365)
382 4e4y_A Short chain dehydrogena 95.8 0.021 7.2E-07 44.4 6.4 36 33-69 2-37 (244)
383 2qk4_A Trifunctional purine bi 95.7 0.064 2.2E-06 45.7 9.9 115 31-157 20-141 (452)
384 1pzg_A LDH, lactate dehydrogen 95.7 0.033 1.1E-06 46.4 7.6 72 34-114 8-86 (331)
385 4fcc_A Glutamate dehydrogenase 95.7 0.11 3.8E-06 45.5 11.3 115 35-161 235-371 (450)
386 3g17_A Similar to 2-dehydropan 95.7 0.0076 2.6E-07 48.8 3.6 99 35-144 2-103 (294)
387 3ghy_A Ketopantoate reductase 95.7 0.015 5.1E-07 47.9 5.5 93 35-140 3-107 (335)
388 1y8q_A Ubiquitin-like 1 activa 95.6 0.074 2.5E-06 44.6 9.8 95 35-137 36-157 (346)
389 2hcy_A Alcohol dehydrogenase 1 95.6 0.047 1.6E-06 44.8 8.4 98 36-138 171-271 (347)
390 3vh1_A Ubiquitin-like modifier 95.6 0.037 1.3E-06 50.1 8.4 98 35-140 327-467 (598)
391 1c1d_A L-phenylalanine dehydro 95.6 0.027 9.1E-07 47.8 7.0 107 34-161 174-283 (355)
392 2yq5_A D-isomer specific 2-hyd 95.6 0.034 1.2E-06 46.8 7.6 82 35-135 148-234 (343)
393 3lk7_A UDP-N-acetylmuramoylala 95.6 0.049 1.7E-06 46.8 8.8 87 35-134 9-100 (451)
394 1gpj_A Glutamyl-tRNA reductase 95.6 0.024 8.3E-07 48.3 6.7 90 35-138 167-266 (404)
395 3kvo_A Hydroxysteroid dehydrog 95.6 0.22 7.6E-06 41.3 12.5 88 36-139 46-138 (346)
396 2dkn_A 3-alpha-hydroxysteroid 95.5 0.02 6.8E-07 44.0 5.5 33 35-68 1-33 (255)
397 3l77_A Short-chain alcohol deh 95.5 0.046 1.6E-06 42.0 7.6 31 35-66 2-32 (235)
398 3uxy_A Short-chain dehydrogena 95.5 0.013 4.4E-07 46.7 4.5 57 11-69 4-60 (266)
399 1n7h_A GDP-D-mannose-4,6-dehyd 95.5 0.021 7.1E-07 47.0 5.9 33 36-69 29-61 (381)
400 3r3j_A Glutamate dehydrogenase 95.5 0.053 1.8E-06 47.6 8.6 116 34-161 238-376 (456)
401 2wtb_A MFP2, fatty acid multif 95.5 0.032 1.1E-06 51.3 7.6 37 31-70 308-344 (725)
402 3v2g_A 3-oxoacyl-[acyl-carrier 95.5 0.028 9.6E-07 44.8 6.3 34 35-69 31-64 (271)
403 3ado_A Lambda-crystallin; L-gu 95.4 0.054 1.8E-06 45.2 8.0 31 36-69 7-37 (319)
404 3kb6_A D-lactate dehydrogenase 95.3 0.028 9.7E-07 47.0 6.1 62 35-114 141-202 (334)
405 3v8b_A Putative dehydrogenase, 95.3 0.051 1.7E-06 43.6 7.4 59 9-69 2-60 (283)
406 3oet_A Erythronate-4-phosphate 95.3 0.02 6.9E-07 49.0 5.2 60 35-114 119-178 (381)
407 1mld_A Malate dehydrogenase; o 95.3 0.029 9.9E-07 46.3 6.0 72 36-114 1-76 (314)
408 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.16 5.4E-06 40.3 10.0 109 12-134 10-119 (223)
409 4f6l_B AUSA reductase domain p 95.3 0.015 5.1E-07 50.3 4.3 35 34-69 149-183 (508)
410 1tt5_A APPBP1, amyloid protein 95.2 0.085 2.9E-06 46.9 9.3 99 36-136 33-155 (531)
411 1wdk_A Fatty oxidation complex 95.2 0.027 9.2E-07 51.7 6.0 37 31-70 310-346 (715)
412 2b4q_A Rhamnolipids biosynthes 95.2 0.11 3.8E-06 41.3 9.0 32 36-69 30-61 (276)
413 1z45_A GAL10 bifunctional prot 95.2 0.093 3.2E-06 47.1 9.4 33 35-68 11-43 (699)
414 4dvj_A Putative zinc-dependent 95.2 0.056 1.9E-06 44.9 7.5 96 36-136 173-270 (363)
415 3ftp_A 3-oxoacyl-[acyl-carrier 95.1 0.076 2.6E-06 42.2 7.9 30 36-66 29-58 (270)
416 3orf_A Dihydropteridine reduct 95.1 0.14 4.7E-06 40.0 9.2 33 34-67 21-53 (251)
417 2ph3_A 3-oxoacyl-[acyl carrier 95.1 0.2 7E-06 38.1 10.1 33 36-69 2-34 (245)
418 4iin_A 3-ketoacyl-acyl carrier 95.0 0.3 1E-05 38.4 11.1 34 34-68 28-61 (271)
419 3ego_A Probable 2-dehydropanto 95.0 0.032 1.1E-06 45.5 5.4 99 35-151 2-111 (307)
420 2o4c_A Erythronate-4-phosphate 95.0 0.018 6.1E-07 49.3 4.0 60 35-114 116-175 (380)
421 3don_A Shikimate dehydrogenase 95.0 0.021 7.2E-07 46.7 4.2 33 35-70 117-150 (277)
422 1hyh_A L-hicdh, L-2-hydroxyiso 95.0 0.11 3.7E-06 42.3 8.5 71 35-115 1-78 (309)
423 2i6t_A Ubiquitin-conjugating e 94.9 0.053 1.8E-06 44.7 6.5 70 32-113 11-84 (303)
424 3u5t_A 3-oxoacyl-[acyl-carrier 94.9 0.079 2.7E-06 42.0 7.4 33 36-69 28-60 (267)
425 2o23_A HADH2 protein; HSD17B10 94.9 0.24 8.3E-06 38.3 10.0 31 36-67 13-43 (265)
426 3cxt_A Dehydrogenase with diff 94.9 0.077 2.6E-06 42.7 7.3 57 9-66 5-64 (291)
427 2ehd_A Oxidoreductase, oxidore 94.9 0.18 6.1E-06 38.4 9.2 31 36-67 6-36 (234)
428 3gvc_A Oxidoreductase, probabl 94.8 0.08 2.7E-06 42.3 7.3 32 36-69 30-61 (277)
429 1dhr_A Dihydropteridine reduct 94.8 0.038 1.3E-06 42.8 5.2 32 35-67 7-38 (241)
430 3gqv_A Enoyl reductase; medium 94.8 0.32 1.1E-05 40.3 11.1 96 35-137 165-264 (371)
431 1pqw_A Polyketide synthase; ro 94.8 0.077 2.6E-06 39.7 6.7 31 36-67 40-70 (198)
432 4e3z_A Putative oxidoreductase 94.8 0.33 1.1E-05 38.1 10.7 33 36-69 27-59 (272)
433 1uay_A Type II 3-hydroxyacyl-C 94.7 0.033 1.1E-06 42.6 4.5 32 36-68 3-34 (242)
434 3i4f_A 3-oxoacyl-[acyl-carrier 94.7 0.23 8E-06 38.6 9.6 35 34-69 6-40 (264)
435 1ooe_A Dihydropteridine reduct 94.7 0.066 2.3E-06 41.2 6.3 32 36-68 4-35 (236)
436 1yxm_A Pecra, peroxisomal tran 94.7 0.24 8.1E-06 39.3 9.7 30 36-66 19-48 (303)
437 1fjh_A 3alpha-hydroxysteroid d 94.7 0.056 1.9E-06 41.9 5.8 70 35-114 1-70 (257)
438 1lld_A L-lactate dehydrogenase 94.7 0.2 6.8E-06 40.5 9.3 36 32-70 4-41 (319)
439 1ur5_A Malate dehydrogenase; o 94.7 0.061 2.1E-06 44.2 6.3 70 35-114 2-78 (309)
440 4eye_A Probable oxidoreductase 94.6 0.02 6.8E-07 47.2 3.3 96 36-136 161-257 (342)
441 3l6e_A Oxidoreductase, short-c 94.6 0.1 3.5E-06 40.5 7.2 32 36-69 4-35 (235)
442 3e03_A Short chain dehydrogena 94.6 0.39 1.3E-05 37.9 10.8 89 36-139 7-99 (274)
443 4dqx_A Probable oxidoreductase 94.6 0.16 5.5E-06 40.4 8.6 32 36-69 28-59 (277)
444 1id1_A Putative potassium chan 94.5 0.096 3.3E-06 37.8 6.5 31 36-69 4-34 (153)
445 3v2h_A D-beta-hydroxybutyrate 94.5 0.33 1.1E-05 38.6 10.3 32 36-69 26-57 (281)
446 3n58_A Adenosylhomocysteinase; 94.5 0.032 1.1E-06 49.1 4.4 91 27-133 239-330 (464)
447 3dfu_A Uncharacterized protein 94.5 0.028 9.5E-07 45.0 3.7 108 35-156 6-125 (232)
448 3gaz_A Alcohol dehydrogenase s 94.5 0.029 9.8E-07 46.2 3.8 95 36-137 152-247 (343)
449 4hv4_A UDP-N-acetylmuramate--L 94.4 0.17 5.9E-06 44.1 8.9 88 32-135 19-110 (494)
450 3vtz_A Glucose 1-dehydrogenase 94.4 0.058 2E-06 42.8 5.4 33 34-67 13-45 (269)
451 3gem_A Short chain dehydrogena 94.4 0.11 3.6E-06 41.2 6.9 32 36-69 28-59 (260)
452 3tpc_A Short chain alcohol deh 94.4 0.48 1.7E-05 36.8 10.8 32 36-69 8-39 (257)
453 1b8p_A Protein (malate dehydro 94.4 0.058 2E-06 44.6 5.5 73 34-114 4-91 (329)
454 4e6p_A Probable sorbitol dehyd 94.4 0.17 5.8E-06 39.6 8.0 32 36-69 9-40 (259)
455 3u9l_A 3-oxoacyl-[acyl-carrier 94.4 0.36 1.2E-05 39.5 10.3 88 36-139 6-96 (324)
456 2dtx_A Glucose 1-dehydrogenase 94.3 0.081 2.8E-06 41.8 6.1 31 36-67 9-39 (264)
457 1wma_A Carbonyl reductase [NAD 94.3 0.096 3.3E-06 40.4 6.5 35 34-68 3-37 (276)
458 3mw9_A GDH 1, glutamate dehydr 94.3 0.16 5.5E-06 45.0 8.4 114 32-161 241-369 (501)
459 1nff_A Putative oxidoreductase 94.3 0.3 1E-05 38.3 9.3 30 36-66 8-37 (260)
460 2ew8_A (S)-1-phenylethanol deh 94.3 0.66 2.3E-05 35.9 11.3 32 36-69 8-39 (249)
461 1t2d_A LDH-P, L-lactate dehydr 94.3 0.14 4.7E-06 42.4 7.6 70 35-114 4-80 (322)
462 4dry_A 3-oxoacyl-[acyl-carrier 94.2 0.073 2.5E-06 42.6 5.7 46 22-69 16-65 (281)
463 2z1n_A Dehydrogenase; reductas 94.2 0.31 1.1E-05 38.0 9.3 32 36-69 8-39 (260)
464 1v8b_A Adenosylhomocysteinase; 94.2 0.048 1.6E-06 48.1 4.9 90 29-134 251-341 (479)
465 2rhc_B Actinorhodin polyketide 94.2 0.14 4.7E-06 40.7 7.2 32 36-69 23-54 (277)
466 3sc4_A Short chain dehydrogena 94.2 0.6 2E-05 37.1 11.1 88 36-139 10-102 (285)
467 1uls_A Putative 3-oxoacyl-acyl 94.2 0.44 1.5E-05 36.9 10.1 30 36-66 6-35 (245)
468 3afn_B Carbonyl reductase; alp 94.2 0.37 1.3E-05 36.9 9.6 31 36-67 8-38 (258)
469 4fc7_A Peroxisomal 2,4-dienoyl 94.2 0.21 7.3E-06 39.5 8.4 84 36-139 28-114 (277)
470 1sny_A Sniffer CG10964-PA; alp 94.2 0.23 7.7E-06 38.6 8.3 34 35-68 21-56 (267)
471 1y7t_A Malate dehydrogenase; N 94.1 0.049 1.7E-06 44.7 4.6 71 35-114 4-88 (327)
472 3gvp_A Adenosylhomocysteinase 94.1 0.045 1.5E-06 47.7 4.5 88 28-131 213-301 (435)
473 3r1i_A Short-chain type dehydr 94.1 0.33 1.1E-05 38.5 9.4 32 36-69 33-64 (276)
474 3qiv_A Short-chain dehydrogena 94.1 0.13 4.5E-06 39.8 6.9 32 36-69 10-41 (253)
475 4ffl_A PYLC; amino acid, biosy 94.1 0.12 4.1E-06 42.5 7.0 68 35-111 1-68 (363)
476 1l7d_A Nicotinamide nucleotide 94.1 0.094 3.2E-06 44.2 6.4 34 34-70 171-204 (384)
477 3rih_A Short chain dehydrogena 94.1 0.56 1.9E-05 37.7 10.8 32 36-69 42-73 (293)
478 2ewd_A Lactate dehydrogenase,; 94.1 0.3 1E-05 39.8 9.3 68 35-114 4-80 (317)
479 3tzq_B Short-chain type dehydr 94.1 0.29 9.8E-06 38.6 8.9 32 36-69 12-43 (271)
480 4a2c_A Galactitol-1-phosphate 94.1 0.15 5.3E-06 41.4 7.5 98 36-138 162-262 (346)
481 3ezl_A Acetoacetyl-COA reducta 94.1 0.16 5.4E-06 39.4 7.2 35 34-69 12-46 (256)
482 3vku_A L-LDH, L-lactate dehydr 94.1 0.064 2.2E-06 44.8 5.1 71 34-114 8-84 (326)
483 3ak4_A NADH-dependent quinucli 94.0 0.46 1.6E-05 36.9 10.0 32 36-69 13-44 (263)
484 1y8q_B Anthracycline-, ubiquit 94.0 0.32 1.1E-05 44.3 10.0 91 36-136 18-139 (640)
485 3hhp_A Malate dehydrogenase; M 94.0 0.14 4.9E-06 42.4 7.2 70 36-114 1-77 (312)
486 3n74_A 3-ketoacyl-(acyl-carrie 94.0 0.22 7.6E-06 38.6 8.0 32 36-69 10-41 (261)
487 3uko_A Alcohol dehydrogenase c 94.0 0.072 2.5E-06 44.3 5.4 96 36-138 195-297 (378)
488 3ce6_A Adenosylhomocysteinase; 94.0 0.072 2.5E-06 47.0 5.6 87 32-134 271-358 (494)
489 4iiu_A 3-oxoacyl-[acyl-carrier 94.0 0.33 1.1E-05 38.0 9.0 33 36-69 27-59 (267)
490 1yo6_A Putative carbonyl reduc 94.0 0.25 8.5E-06 37.5 8.1 32 36-68 4-37 (250)
491 2hjr_A Malate dehydrogenase; m 93.9 0.2 6.8E-06 41.5 8.0 70 35-114 14-90 (328)
492 3pgx_A Carveol dehydrogenase; 93.9 0.87 3E-05 35.8 11.5 93 36-139 16-114 (280)
493 1zk4_A R-specific alcohol dehy 93.9 0.34 1.2E-05 37.1 8.8 30 36-66 7-36 (251)
494 3ai3_A NADPH-sorbose reductase 93.9 0.28 9.7E-06 38.2 8.5 32 36-69 8-39 (263)
495 2cfc_A 2-(R)-hydroxypropyl-COM 93.9 0.34 1.2E-05 37.1 8.8 30 36-66 3-32 (250)
496 3o26_A Salutaridine reductase; 93.9 0.23 7.7E-06 39.2 7.9 86 35-140 12-101 (311)
497 3ged_A Short-chain dehydrogena 93.9 0.58 2E-05 37.3 10.4 32 36-69 3-34 (247)
498 1ldn_A L-lactate dehydrogenase 93.9 0.075 2.6E-06 43.7 5.2 35 34-70 5-40 (316)
499 3m1a_A Putative dehydrogenase; 93.8 0.16 5.6E-06 39.9 7.0 33 35-68 5-37 (281)
500 3pk0_A Short-chain dehydrogena 93.8 0.45 1.5E-05 37.3 9.5 32 36-69 11-42 (262)
No 1
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=99.95 E-value=4.1e-28 Score=202.80 Aligned_cols=122 Identities=13% Similarity=0.280 Sum_probs=114.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~---~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
+|+||+|+||+|+||+.+++.+.+.|+++|+|++|+. ..|+|+++++|.. +.++++++|+++++. ++|||
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~-~~gv~v~~dl~~ll~------~aDVv 92 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD-FLGVRITDDPESAFS------NTEGI 92 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS-CCSCBCBSCHHHHTT------SCSEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC-cCCceeeCCHHHHhc------CCCEE
Confidence 5799999999999999999999999999999999964 3689999999886 789999999999985 89999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
||||+|+.+.+++..|+++|+|+|+|||||++++.++|+++|++.|+|+++|
T Consensus 93 IDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~~~~~~a~N 144 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKYTTIVKSGN 144 (288)
T ss_dssp EECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHTTSEEEECSC
T ss_pred EEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhCcCCEEEECC
Confidence 9999999999999999999999999999999999999999999999999987
No 2
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.94 E-value=6.8e-27 Score=193.83 Aligned_cols=120 Identities=23% Similarity=0.323 Sum_probs=112.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~---~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
|+||+|+||+|+||+.+++.+.++++++|++++|+. ..|+|++++.|.. + ++++++|+++++. ++||||
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~-~-gv~v~~dl~~ll~------~~DVVI 78 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ-T-GVALTDDIERVCA------EADYLI 78 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC-C-SCBCBCCHHHHHH------HCSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC-C-CceecCCHHHHhc------CCCEEE
Confidence 699999999999999999999999999999999964 3689999998874 4 9999999999986 799999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
|||+|+.+.+++..|+++|+++|+|||||++++.++|+++|++.|+|+++|
T Consensus 79 DfT~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~~~vv~a~N 129 (272)
T 4f3y_A 79 DFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIALVFSAN 129 (272)
T ss_dssp ECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTTSEEEECSC
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhccCCEEEECC
Confidence 999999999999999999999999999999999999999999999999987
No 3
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=99.92 E-value=5.8e-25 Score=181.95 Aligned_cols=122 Identities=22% Similarity=0.314 Sum_probs=111.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC---CCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS---VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~---~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
+++||+|+|++|+||+.+++.+.+.++++|++++|+.. .|.+++++.+.. +.++++++|+++++. ++|||
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~-~~~v~~~~dl~~~l~------~~DvV 76 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG-KTGVTVQSSLDAVKD------DFDVF 76 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS-CCSCCEESCSTTTTT------SCSEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC-cCCceecCCHHHHhc------CCCEE
Confidence 46899999988999999999999999999999999643 377888888775 678899999998884 79999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
||||+|+.+.+++..|+++|+|+|+||||+++++.++|.++|++.|++++++
T Consensus 77 IDft~p~~~~~~~~~a~~~G~~vVigTtG~~~e~~~~L~~~a~~~~vv~a~N 128 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAAN 128 (273)
T ss_dssp EECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHTTTSCEEECSC
T ss_pred EEcCChHHHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHhcCCCCEEEEec
Confidence 9999999999999999999999999999999999999999999999999985
No 4
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=99.88 E-value=8.5e-23 Score=166.77 Aligned_cols=106 Identities=13% Similarity=0.243 Sum_probs=96.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
|+||+|+|+ |+||+.+++.+.+.++ +|++++|+.... ..++++++|+++++ ++|||||||
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~~~-----------~~gv~v~~dl~~l~-------~~DVvIDft 62 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTPKA-----------TTPYQQYQHIADVK-------GADVAIDFS 62 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSCC-------------CCSCBCSCTTTCT-------TCSEEEECS
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCccc-----------cCCCceeCCHHHHh-------CCCEEEEeC
Confidence 799999997 9999999999999999 999999975321 45788999998864 689999999
Q ss_pred CchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 115 DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
.|+.+.+++. +++|+++|+|||||++++.++|+++|++.|+|+++|
T Consensus 63 ~p~a~~~~~~--l~~g~~vVigTTG~s~e~~~~l~~aa~~~~v~~a~N 108 (243)
T 3qy9_A 63 NPNLLFPLLD--EDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSAN 108 (243)
T ss_dssp CHHHHHHHHT--SCCCCCEEECCCSSHHHHHHHHHHHTTTSEEEECSS
T ss_pred ChHHHHHHHH--HhcCCceEeCCCCCCHHHHHHHHHHHhcCCEEEECC
Confidence 9999999997 999999999999999999999999999999999987
No 5
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=99.86 E-value=4.1e-21 Score=156.96 Aligned_cols=101 Identities=23% Similarity=0.338 Sum_probs=91.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||+|+|++|+||+.+++.+.+.++++|++++|+. +|+++++. .++|||||||+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------------~dl~~~~~-----~~~DvvIDfT~ 54 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------------DPLSLLTD-----GNTEVVIDFTH 54 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------------CCTHHHHH-----TTCCEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------------CCHHHHhc-----cCCcEEEEccC
Confidence 58999999999999999999989999999999852 25666664 38999999999
Q ss_pred chhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhh---hcCeEEcCC
Q 031216 116 ASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD---KASMVSTGS 162 (163)
Q Consensus 116 p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~---~~~Vv~tg~ 162 (163)
|+.+.+++..|+++|+++|+|||||++++.++|+++|+ ..++++++|
T Consensus 55 p~a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N 104 (245)
T 1p9l_A 55 PDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPN 104 (245)
T ss_dssp TTTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSC
T ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECC
Confidence 99999999999999999999999999999999999998 678999986
No 6
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=99.83 E-value=2e-20 Score=151.52 Aligned_cols=98 Identities=18% Similarity=0.271 Sum_probs=87.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-+|.+|+|++||||+.+++.+ ..++++|++++|+.. + ++ + .++|||||||
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~~---~----------------~~----l------~~~DVvIDFT 61 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVNG---V----------------EE----L------DSPDVVIDFS 61 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETTE---E----------------EE----C------SCCSEEEECS
T ss_pred cceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCCC---c----------------cc----c------cCCCEEEECC
Confidence 378999999999999998765 689999999999631 0 11 1 2689999999
Q ss_pred CchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 115 DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
.|+.+.++++.|+++|+|+|+|||||++++.+.|++++++.|+++++|
T Consensus 62 ~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~~~vv~apN 109 (228)
T 1vm6_A 62 SPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYN 109 (228)
T ss_dssp CGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTTSEEEECSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHhhCCEEEecc
Confidence 999999999999999999999999999999999999999999999987
No 7
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=99.78 E-value=6.4e-19 Score=147.45 Aligned_cols=117 Identities=21% Similarity=0.203 Sum_probs=99.3
Q ss_pred CCCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-eeCCHHHHHhcccccCCccEE
Q 031216 33 QSNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~~~l~ell~~~~~~~~~DVV 110 (163)
++||||||+| +|+||+. ++..+...|+++|+|++|++. ..+.++.. .++++ +|+|++++++. +++|+|
T Consensus 21 ~~mirigiIG-~G~ig~~~~~~~~~~~~~~~lvav~d~~~--~~a~~~a~---~~g~~~~y~d~~ell~~----~~iDaV 90 (350)
T 4had_A 21 QSMLRFGIIS-TAKIGRDNVVPAIQDAENCVVTAIASRDL--TRAREMAD---RFSVPHAFGSYEEMLAS----DVIDAV 90 (350)
T ss_dssp -CCEEEEEES-CCHHHHHTHHHHHHHCSSEEEEEEECSSH--HHHHHHHH---HHTCSEEESSHHHHHHC----SSCSEE
T ss_pred cCccEEEEEc-ChHHHHHHHHHHHHhCCCeEEEEEECCCH--HHHHHHHH---HcCCCeeeCCHHHHhcC----CCCCEE
Confidence 5799999999 6999987 578888999999999999753 22333331 45664 79999999984 789999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++++
T Consensus 91 ~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l 140 (350)
T 4had_A 91 YIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVV 140 (350)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCE
T ss_pred EEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCce
Confidence 9899999999999999999999999999 889999999999999988765
No 8
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=99.78 E-value=1.8e-18 Score=145.12 Aligned_cols=116 Identities=10% Similarity=0.068 Sum_probs=96.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHh-------cCCcEEEEEEecCCCCcchhhhccCCCCCCc-ceeCCHHHHHhcccccC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTK-------ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSK 105 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~-------~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi-~v~~~l~ell~~~~~~~ 105 (163)
+++||||+| +|+||+.|++.+.. .++++|++++|+.. ..+.++.. .+++ .+|+|++++++. +
T Consensus 24 kkirvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~--~~a~~~a~---~~g~~~~y~d~~ell~~----~ 93 (393)
T 4fb5_A 24 KPLGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANA--GLAEARAG---EFGFEKATADWRALIAD----P 93 (393)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHH---HHTCSEEESCHHHHHHC----T
T ss_pred CCccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCH--HHHHHHHH---HhCCCeecCCHHHHhcC----C
Confidence 469999999 69999999987654 46889999999653 22233321 3455 479999999984 7
Q ss_pred CccEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
++|+|+.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++++
T Consensus 94 ~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 148 (393)
T 4fb5_A 94 EVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVA 148 (393)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCE
T ss_pred CCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCcc
Confidence 899999899999999999999999999999999 899999999999999998765
No 9
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=99.73 E-value=2.7e-17 Score=139.09 Aligned_cols=114 Identities=17% Similarity=0.108 Sum_probs=97.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhccCCCCCC--cceeCCHHHHHhcccccCCccEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~-~~~~~eLvgvid~~~~g~~~~~l~g~~~~~g--i~v~~~l~ell~~~~~~~~~DVV 110 (163)
+++||+|+| +|+||+.+++.+. ..++++|++++|+... .+..+.. .++ +..|+|++++++. .++|+|
T Consensus 22 ~~~rvgiIG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~~--~~~~~a~---~~g~~~~~~~~~~~ll~~----~~~D~V 91 (357)
T 3ec7_A 22 MTLKAGIVG-IGMIGSDHLRRLANTVSGVEVVAVCDIVAG--RAQAALD---KYAIEAKDYNDYHDLIND----KDVEVV 91 (357)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHTCTTEEEEEEECSSTT--HHHHHHH---HHTCCCEEESSHHHHHHC----TTCCEE
T ss_pred CeeeEEEEC-CcHHHHHHHHHHHhhCCCcEEEEEEeCCHH--HHHHHHH---HhCCCCeeeCCHHHHhcC----CCCCEE
Confidence 468999999 6999999999998 7899999999996532 2223221 234 6789999999974 689999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCe
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASM 157 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~V 157 (163)
+.+|++..+.+++..|+++|+||++++| +.+.++.++|.++|++.++
T Consensus 92 ~i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 139 (357)
T 3ec7_A 92 IITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGK 139 (357)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTS
T ss_pred EEcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999 8899999999999999887
No 10
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=99.73 E-value=2.4e-17 Score=139.09 Aligned_cols=116 Identities=14% Similarity=0.077 Sum_probs=99.8
Q ss_pred CCeeEEEEcCCCHHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~-~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+++||+|+| +|+||+ .+++.+.+.++++|++++|+.. ..+..+.. .++++.++|++++++. .++|+|+.
T Consensus 26 ~~~rigiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a~---~~g~~~~~~~~~ll~~----~~~D~V~i 95 (350)
T 3rc1_A 26 NPIRVGVIG-CADIAWRRALPALEAEPLTEVTAIASRRW--DRAKRFTE---RFGGEPVEGYPALLER----DDVDAVYV 95 (350)
T ss_dssp CCEEEEEES-CCHHHHHTHHHHHHHCTTEEEEEEEESSH--HHHHHHHH---HHCSEEEESHHHHHTC----TTCSEEEE
T ss_pred CceEEEEEc-CcHHHHHHHHHHHHhCCCeEEEEEEcCCH--HHHHHHHH---HcCCCCcCCHHHHhcC----CCCCEEEE
Confidence 369999999 699998 7999999999999999999653 22233321 4577888999999974 68999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..|+++|+||+++|| +.+.++.++|.++|++.++++
T Consensus 96 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~ 143 (350)
T 3rc1_A 96 PLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLL 143 (350)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred CCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 99999999999999999999999999 889999999999999998865
No 11
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=99.72 E-value=4.8e-17 Score=136.87 Aligned_cols=117 Identities=24% Similarity=0.214 Sum_probs=100.2
Q ss_pred CCeeEEEEcCCCHHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~-~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+|+||+|+| +|+||+ .+++.+...++++|++++|+. ..++..+..+ ..++++|+|++++++. .++|+|+.
T Consensus 1 M~~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~---~~~~~~~~~~~~ll~~----~~~D~V~i 71 (349)
T 3i23_A 1 MTVKMGFIG-FGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFK---EKGVNFTADLNELLTD----PEIELITI 71 (349)
T ss_dssp CCEEEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHH---TTTCEEESCTHHHHSC----TTCCEEEE
T ss_pred CeeEEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhC---CCCCeEECCHHHHhcC----CCCCEEEE
Confidence 479999999 699998 799999889999999999976 3333333222 2467889999999974 68999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++.+
T Consensus 72 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 119 (349)
T 3i23_A 72 CTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVV 119 (349)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred eCCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeE
Confidence 99999999999999999999999999 889999999999999988755
No 12
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=99.72 E-value=8.4e-17 Score=134.22 Aligned_cols=116 Identities=16% Similarity=0.172 Sum_probs=98.3
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-eeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~~~l~ell~~~~~~~~~DVVID 112 (163)
+|+||+|+| +|+||+.+++.+.+.++++|++++|+... .+..+. ..++++ .|+|++++++. .++|+|+.
T Consensus 4 ~~~rigiiG-~G~ig~~~~~~l~~~~~~~~~av~d~~~~--~~~~~a---~~~~~~~~~~~~~~ll~~----~~~D~V~i 73 (329)
T 3evn_A 4 SKVRYGVVS-TAKVAPRFIEGVRLAGNGEVVAVSSRTLE--SAQAFA---NKYHLPKAYDKLEDMLAD----ESIDVIYV 73 (329)
T ss_dssp -CEEEEEEB-CCTTHHHHHHHHHHHCSEEEEEEECSCSS--TTCC------CCCCSCEESCHHHHHTC----TTCCEEEE
T ss_pred CceEEEEEe-chHHHHHHHHHHHhCCCcEEEEEEcCCHH--HHHHHH---HHcCCCcccCCHHHHhcC----CCCCEEEE
Confidence 469999999 59999999999999999999999996532 122222 245665 79999999974 68999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..|+++|+||++++| +.+.++.++|.++|++.++++
T Consensus 74 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~ 121 (329)
T 3evn_A 74 ATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFL 121 (329)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCE
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999999999999 889999999999999988754
No 13
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=99.72 E-value=6.6e-17 Score=135.64 Aligned_cols=110 Identities=18% Similarity=0.224 Sum_probs=97.4
Q ss_pred CCeeEEEEcCCCHHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~-~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+++||+|+| +|+||+ .+++.+.+.++++|++++|+... ..+++.|+|++++++. .+++|+|+.
T Consensus 24 ~~~rvgiiG-~G~ig~~~~~~~l~~~~~~~lvav~d~~~~------------~~g~~~~~~~~~ll~~---~~~vD~V~i 87 (330)
T 4ew6_A 24 SPINLAIVG-VGKIVRDQHLPSIAKNANFKLVATASRHGT------------VEGVNSYTTIEAMLDA---EPSIDAVSL 87 (330)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHHHHCTTEEEEEEECSSCC------------CTTSEEESSHHHHHHH---CTTCCEEEE
T ss_pred CCceEEEEe-cCHHHHHHHHHHHHhCCCeEEEEEEeCChh------------hcCCCccCCHHHHHhC---CCCCCEEEE
Confidence 359999999 699998 79999999999999999997531 3578889999999972 157999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++.+
T Consensus 88 ~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~ 135 (330)
T 4ew6_A 88 CMPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQGASL 135 (330)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCE
T ss_pred eCCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeE
Confidence 99999999999999999999999999 789999999999999988754
No 14
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=99.71 E-value=6.4e-17 Score=136.87 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=100.0
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+++||+|+| +|+||+.+++.+.+.++++|++++|+... .. +.. ...++++|+|++++++. .++|+|+.+
T Consensus 4 ~~~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~--~~-~~a---~~~g~~~~~~~~~ll~~----~~~D~V~i~ 72 (359)
T 3e18_A 4 KKYQLVIVG-YGGMGSYHVTLASAADNLEVHGVFDILAE--KR-EAA---AQKGLKIYESYEAVLAD----EKVDAVLIA 72 (359)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSHH--HH-HHH---HTTTCCBCSCHHHHHHC----TTCCEEEEC
T ss_pred CcCcEEEEC-cCHHHHHHHHHHHhCCCcEEEEEEcCCHH--HH-HHH---HhcCCceeCCHHHHhcC----CCCCEEEEc
Confidence 369999999 69999999999999999999999996531 11 222 15678899999999974 789999999
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|++..+.+++..|+++|+||++++| +.+.++.++|.++|++.++++
T Consensus 73 tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 119 (359)
T 3e18_A 73 TPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHF 119 (359)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred CCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 9999999999999999999999999 889999999999999988765
No 15
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=99.71 E-value=5.7e-17 Score=136.12 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=99.1
Q ss_pred CCCCeeEEEEcCCC-HHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhccCCCCCCc-ceeCCHHHHHhcccccCCcc
Q 031216 32 PQSNIKVIINGAVK-EIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARA 108 (163)
Q Consensus 32 ~~~~irV~VvGa~G-~mG~~i~~~i~~~-~~~eLvgvid~~~~g~~~~~l~g~~~~~gi-~v~~~l~ell~~~~~~~~~D 108 (163)
+++++||+|+| +| .||+.+++.+.+. ++++|++++|+.. ..+..+.. .+++ ++|+|++++++. +++|
T Consensus 15 ~~~~irvgiIG-~G~~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~a~---~~~~~~~~~~~~~ll~~----~~vD 84 (340)
T 1zh8_A 15 PLRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTR--SHAEEFAK---MVGNPAVFDSYEELLES----GLVD 84 (340)
T ss_dssp -CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSH--HHHHHHHH---HHSSCEEESCHHHHHHS----SCCS
T ss_pred CCCceeEEEEe-cCHHHHHHHHHHHHhCCCceEEEEEEcCCH--HHHHHHHH---HhCCCcccCCHHHHhcC----CCCC
Confidence 45679999999 59 8999999999988 8999999999643 12222221 3344 689999999974 6899
Q ss_pred EEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 109 VVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 109 VVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|+.+|++..+.+++..|+++|+||++++| +++.++.++|.++|++.++++
T Consensus 85 ~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 136 (340)
T 1zh8_A 85 AVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTV 136 (340)
T ss_dssp EEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCE
T ss_pred EEEEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 999999889999999999999999999999 789999999999999988754
No 16
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=99.71 E-value=2.9e-17 Score=140.65 Aligned_cols=116 Identities=14% Similarity=0.107 Sum_probs=97.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhc--------CCcEEEEEEecCCCCcchhhhccCCCCCCc-ceeCCHHHHHhccccc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKA--------RGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQS 104 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~--------~~~eLvgvid~~~~g~~~~~l~g~~~~~gi-~v~~~l~ell~~~~~~ 104 (163)
++|||||+| +|+||+.|++.+.+. ++++|++++|+.. ..+.++.. .+++ ++|+|++++++.
T Consensus 25 ~klrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~--~~a~~~a~---~~~~~~~y~d~~~ll~~---- 94 (412)
T 4gqa_A 25 ARLNIGLIG-SGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQ--AMAERHAA---KLGAEKAYGDWRELVND---- 94 (412)
T ss_dssp CEEEEEEEC-CSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSH--HHHHHHHH---HHTCSEEESSHHHHHHC----
T ss_pred ccceEEEEc-CcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCH--HHHHHHHH---HcCCCeEECCHHHHhcC----
Confidence 569999999 699999999998765 4789999999653 22223221 3455 479999999984
Q ss_pred CCccEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+++|+|+.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++++
T Consensus 95 ~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 150 (412)
T 4gqa_A 95 PQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKT 150 (412)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCE
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCee
Confidence 7899999899999999999999999999999999 889999999999999988754
No 17
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=99.71 E-value=1.4e-16 Score=134.03 Aligned_cols=115 Identities=24% Similarity=0.308 Sum_probs=99.2
Q ss_pred CCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+++||+|+| +|+||+. +++.+.+.++++|++++|+... .+.+ ...++++|+|++++++. .++|+|+.
T Consensus 6 ~~~rvgiiG-~G~~g~~~~~~~~~~~~~~~l~av~d~~~~--~~~~-----~~~~~~~~~~~~~ll~~----~~vD~V~i 73 (352)
T 3kux_A 6 DKIKVGLLG-YGYASKTFHAPLIMGTPGLELAGVSSSDAS--KVHA-----DWPAIPVVSDPQMLFND----PSIDLIVI 73 (352)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCHH--HHHT-----TCSSCCEESCHHHHHHC----SSCCEEEE
T ss_pred CCceEEEEC-CCHHHHHHHHHHHhhCCCcEEEEEECCCHH--HHHh-----hCCCCceECCHHHHhcC----CCCCEEEE
Confidence 469999999 6999997 9999999999999999996531 1111 13467889999999984 68999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEEc
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
+|++..+.+++..|+++||||++++| +.+.++.++|.++|++.++++.
T Consensus 74 ~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 74 PTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp CSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEE
T ss_pred eCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 99889999999999999999999999 8999999999999999988653
No 18
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=99.71 E-value=7.8e-17 Score=134.19 Aligned_cols=116 Identities=13% Similarity=0.139 Sum_probs=99.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+|+||+|+| +|+||+.+++.+.+.++++|++++|+.. ..+..+.. ..+++ |+|++++++. +++|+|+.+
T Consensus 2 m~~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~~---~~~~~-~~~~~~~l~~----~~~D~V~i~ 70 (331)
T 4hkt_A 2 MTVRFGLLG-AGRIGKVHAKAVSGNADARLVAVADAFP--AAAEAIAG---AYGCE-VRTIDAIEAA----ADIDAVVIC 70 (331)
T ss_dssp -CEEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSH--HHHHHHHH---HTTCE-ECCHHHHHHC----TTCCEEEEC
T ss_pred CceEEEEEC-CCHHHHHHHHHHhhCCCcEEEEEECCCH--HHHHHHHH---HhCCC-cCCHHHHhcC----CCCCEEEEe
Confidence 479999999 5999999999999999999999999653 22233322 45777 9999999974 689999999
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEEc
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
|++..+.+++..++++|+||++++| +.+.++.++|.++|++.++.+.
T Consensus 71 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~ 118 (331)
T 4hkt_A 71 TPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLM 118 (331)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred CCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999999 8999999999999999987653
No 19
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=99.71 E-value=1.5e-16 Score=131.60 Aligned_cols=113 Identities=18% Similarity=0.221 Sum_probs=96.8
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHh---cCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCc
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTK---ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR 107 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~---~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~ 107 (163)
++++|+||+|+| +|.||+.+++.+.. .++++|++++|++... + ..+++ +.|++++++. .++
T Consensus 3 ~~~~~~rvgiIG-~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----~------~~g~~-~~~~~ell~~----~~v 66 (294)
T 1lc0_A 3 TNSGKFGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----S------LDEVR-QISLEDALRS----QEI 66 (294)
T ss_dssp CCCCSEEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----E------ETTEE-BCCHHHHHHC----SSE
T ss_pred CCCCcceEEEEE-EcHHHHHHHHHHhccccCCCEEEEEEECchHHH----H------HcCCC-CCCHHHHhcC----CCC
Confidence 456789999999 59999999999876 6899999999964321 1 33555 5899999974 689
Q ss_pred cEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 108 AVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 108 DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|+|+.+|++..+.++++.|+++||||++++| ..+.++.++|.++|++.++++
T Consensus 67 D~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 119 (294)
T 1lc0_A 67 DVAYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVL 119 (294)
T ss_dssp EEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCE
T ss_pred CEEEEeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 9999999999999999999999999999999 789999999999999988754
No 20
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=99.71 E-value=1.2e-16 Score=135.11 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=98.7
Q ss_pred CCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCC-CcceeCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~-gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+|+||+|+| +|+||+. +++.+...++++|++++|+... ...+ .+ ++++|+|++++++. .++|+|+
T Consensus 4 ~~~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~~------~~~~~~~~~~~~~ll~~----~~vD~V~ 70 (362)
T 3fhl_A 4 EIIKTGLAA-FGMSGQVFHAPFISTNPHFELYKIVERSKE--LSKE------RYPQASIVRSFKELTED----PEIDLIV 70 (362)
T ss_dssp CCEEEEESC-CSHHHHHTTHHHHHHCTTEEEEEEECSSCC--GGGT------TCTTSEEESCSHHHHTC----TTCCEEE
T ss_pred CceEEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCHH--HHHH------hCCCCceECCHHHHhcC----CCCCEEE
Confidence 579999999 6999997 8999999999999999997532 2221 23 67889999999984 6799999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++++
T Consensus 71 i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 119 (362)
T 3fhl_A 71 VNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLML 119 (362)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred EeCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEE
Confidence 999999999999999999999999999 899999999999999988765
No 21
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=99.71 E-value=1.1e-16 Score=133.95 Aligned_cols=116 Identities=14% Similarity=0.167 Sum_probs=100.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+|+||+|+| +|+||+.+++.+.+.++++|++++|+.. ..+..+.. ..++++|+|++++++. .++|+|+.+
T Consensus 3 ~~~rvgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a~---~~g~~~~~~~~~~l~~----~~~D~V~i~ 72 (344)
T 3euw_A 3 LTLRIALFG-AGRIGHVHAANIAANPDLELVVIADPFI--EGAQRLAE---ANGAEAVASPDEVFAR----DDIDGIVIG 72 (344)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSH--HHHHHHHH---TTTCEEESSHHHHTTC----SCCCEEEEC
T ss_pred CceEEEEEC-CcHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHHH---HcCCceeCCHHHHhcC----CCCCEEEEe
Confidence 479999999 5999999999999999999999999653 22233332 4567889999999974 689999999
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|++..+.+++..|+++|+||++++| +.+.++..+|.++|++.++++
T Consensus 73 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~ 119 (344)
T 3euw_A 73 SPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKV 119 (344)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGE
T ss_pred CCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeE
Confidence 9999999999999999999999999 889999999999999988754
No 22
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=99.70 E-value=1.1e-16 Score=141.05 Aligned_cols=142 Identities=13% Similarity=0.163 Sum_probs=112.3
Q ss_pred eecccccccccccceeeeccCCCC--------CCCeeEEEEcCC---CHHHHHHHHHHHhc-CCcEEEEEEecCCCCcch
Q 031216 9 HCRMHHISQNVKAKRFISCSTNPP--------QSNIKVIINGAV---KEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDI 76 (163)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~irV~VvGa~---G~mG~~i~~~i~~~-~~~eLvgvid~~~~g~~~ 76 (163)
|-.-||-|.|+.+.+-...-.++. .+++||+|+|+. |.||+.+++.+... ++++|++++|+.. ..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~--~~a 82 (479)
T 2nvw_A 5 HHHHHHSSENLYFQGHMLANNNKRSKLSTVPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTL--KSS 82 (479)
T ss_dssp ---CTTCGGGTGGGTCCCCCCCTTSGGGSSGGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCH--HHH
T ss_pred cccccccchhHHHHHHHHhhccccccCCCCCCCCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCH--HHH
Confidence 445688999998877655443333 346999999942 99999999999988 9999999999653 122
Q ss_pred hhhccCCCCCCcc---eeCCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcC------CcEEEeCC-CCCHHHHH
Q 031216 77 GMVCDMEQPLEIP---VMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFG------MRSVVYVP-HIQLETVS 146 (163)
Q Consensus 77 ~~l~g~~~~~gi~---v~~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G------~~vVigtt-g~~~e~~~ 146 (163)
..+.. .++++ +|+|++++++. .++|+|+.+|++..+.+++..|+++| +||++++| +.+.++.+
T Consensus 83 ~~~a~---~~g~~~~~~~~d~~ell~~----~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~ 155 (479)
T 2nvw_A 83 LQTIE---QLQLKHATGFDSLESFAQY----KDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAE 155 (479)
T ss_dssp HHHHH---HTTCTTCEEESCHHHHHHC----TTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHH
T ss_pred HHHHH---HcCCCcceeeCCHHHHhcC----CCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHH
Confidence 22221 33444 89999999974 68999998998889999999999999 99999999 78999999
Q ss_pred HHHHHhhhcC-eEE
Q 031216 147 ALSAFCDKAS-MVS 159 (163)
Q Consensus 147 ~L~~~A~~~~-Vv~ 159 (163)
+|.++|++.+ +++
T Consensus 156 ~l~~~a~~~g~~~~ 169 (479)
T 2nvw_A 156 ELYSISQQRANLQT 169 (479)
T ss_dssp HHHHHHHTCTTCEE
T ss_pred HHHHHHHHcCCeEE
Confidence 9999999998 543
No 23
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=99.70 E-value=7.8e-17 Score=135.49 Aligned_cols=116 Identities=11% Similarity=0.105 Sum_probs=99.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+++||+|+| +|+||+.+++.+.+.++++|++++|+.. ..+..+.. .++++.|+|++++++. .++|+|+.+
T Consensus 4 ~~~~vgiiG-~G~~g~~~~~~l~~~~~~~lvav~d~~~--~~~~~~~~---~~g~~~~~~~~~~l~~----~~~D~V~i~ 73 (354)
T 3db2_A 4 NPVGVAAIG-LGRWAYVMADAYTKSEKLKLVTCYSRTE--DKREKFGK---RYNCAGDATMEALLAR----EDVEMVIIT 73 (354)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEECSSH--HHHHHHHH---HHTCCCCSSHHHHHHC----SSCCEEEEC
T ss_pred CcceEEEEc-cCHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHHH---HcCCCCcCCHHHHhcC----CCCCEEEEe
Confidence 468999999 6999999999999999999999999643 22223221 3467779999999974 689999999
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|++..+.+++..++++|+||++++| +.+.++.++|.++|++.++.+
T Consensus 74 tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~ 120 (354)
T 3db2_A 74 VPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKF 120 (354)
T ss_dssp SCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCE
T ss_pred CChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeE
Confidence 9999999999999999999999999 899999999999999988754
No 24
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=99.70 E-value=2.1e-16 Score=133.85 Aligned_cols=116 Identities=14% Similarity=0.190 Sum_probs=98.7
Q ss_pred CCCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 33 QSNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
++|+||+|+| +|+||+. +++.+...++++|++++|+.. ..+.+. ..++++|+|++++++. .++|+|+
T Consensus 5 ~~~~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~-----~~~~~~~~~~~~ll~~----~~~D~V~ 72 (364)
T 3e82_A 5 NNTINIALIG-YGFVGKTFHAPLIRSVPGLNLAFVASRDE--EKVKRD-----LPDVTVIASPEAAVQH----PDVDLVV 72 (364)
T ss_dssp --CEEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCH--HHHHHH-----CTTSEEESCHHHHHTC----TTCSEEE
T ss_pred CCcceEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHhh-----CCCCcEECCHHHHhcC----CCCCEEE
Confidence 4679999999 5999996 899999999999999999753 122221 2367889999999974 7899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEEc
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++++.
T Consensus 73 i~tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (364)
T 3e82_A 73 IASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLS 122 (364)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred EeCChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 999999999999999999999999999 8899999999999999987653
No 25
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=99.70 E-value=1.1e-16 Score=133.68 Aligned_cols=116 Identities=16% Similarity=0.143 Sum_probs=99.8
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCc-ceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi-~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+++||+|+| +|+||+.+++.+.+.++++|++++|+.. ..+..+.. .+++ .+|+|++++++. .++|+|+.
T Consensus 4 ~~~~igiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~~---~~~~~~~~~~~~~ll~~----~~~D~V~i 73 (330)
T 3e9m_A 4 DKIRYGIMS-TAQIVPRFVAGLRESAQAEVRGIASRRL--ENAQKMAK---ELAIPVAYGSYEELCKD----ETIDIIYI 73 (330)
T ss_dssp CCEEEEECS-CCTTHHHHHHHHHHSSSEEEEEEBCSSS--HHHHHHHH---HTTCCCCBSSHHHHHHC----TTCSEEEE
T ss_pred CeEEEEEEC-chHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHHH---HcCCCceeCCHHHHhcC----CCCCEEEE
Confidence 469999999 5999999999999999999999999653 22333321 3456 478999999974 68999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..|+++|+||++++| +.+.++.++|.++|++.++++
T Consensus 74 ~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~ 121 (330)
T 3e9m_A 74 PTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFL 121 (330)
T ss_dssp CCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCE
T ss_pred cCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 99999999999999999999999999 889999999999999998765
No 26
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=99.69 E-value=1.3e-16 Score=133.09 Aligned_cols=116 Identities=10% Similarity=0.007 Sum_probs=97.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcC--CcEEEEEEecCCCCcchhhhccCCCCCCc-ceeCCHHHHHhcccccCCccEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~--~~eLvgvid~~~~g~~~~~l~g~~~~~gi-~v~~~l~ell~~~~~~~~~DVV 110 (163)
+|+||+|+| +|+||+.+++.+...+ +++|++++|++. ..+.++.. .+++ .+|+|++++++. .++|+|
T Consensus 1 M~~rigiiG-~G~ig~~~~~~l~~~~~~~~~l~av~d~~~--~~a~~~a~---~~~~~~~~~~~~~ll~~----~~vD~V 70 (334)
T 3ohs_X 1 MALRWGIVS-VGLISSDFTAVLQTLPRSEHQVVAVAARDL--SRAKEFAQ---KHDIPKAYGSYEELAKD----PNVEVA 70 (334)
T ss_dssp -CEEEEEEC-CSHHHHHHHHHHTTSCTTTEEEEEEECSSH--HHHHHHHH---HHTCSCEESSHHHHHHC----TTCCEE
T ss_pred CccEEEEEC-chHHHHHHHHHHHhCCCCCeEEEEEEcCCH--HHHHHHHH---HcCCCcccCCHHHHhcC----CCCCEE
Confidence 368999999 6999999999998877 479999999653 22233321 3455 479999999974 789999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++++
T Consensus 71 ~i~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~ 120 (334)
T 3ohs_X 71 YVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFL 120 (334)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCE
T ss_pred EECCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEE
Confidence 9999999999999999999999999999 889999999999999988765
No 27
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=99.69 E-value=8.6e-17 Score=137.16 Aligned_cols=116 Identities=16% Similarity=0.160 Sum_probs=100.2
Q ss_pred CCeeEEEEcCCC-HHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVK-EIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G-~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+++||+|+| +| .||+.+++.+...++++|++++|+.. ....++.. .+++++|+|++++++. .++|+|+.
T Consensus 1 ~~~rigiiG-~G~~~~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a~---~~g~~~~~~~~ell~~----~~vD~V~i 70 (387)
T 3moi_A 1 MKIRFGICG-LGFAGSVLMAPAMRHHPDAQIVAACDPNE--DVRERFGK---EYGIPVFATLAEMMQH----VQMDAVYI 70 (387)
T ss_dssp CCEEEEEEC-CSHHHHTTHHHHHHHCTTEEEEEEECSCH--HHHHHHHH---HHTCCEESSHHHHHHH----SCCSEEEE
T ss_pred CceEEEEEe-CCHHHHHHHHHHHHhCCCeEEEEEEeCCH--HHHHHHHH---HcCCCeECCHHHHHcC----CCCCEEEE
Confidence 469999999 59 99999999999999999999999643 12223321 4578899999999984 68999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|+|..+.+++..|+++||||++++| ..+.++..+|.++|++.++.+
T Consensus 71 ~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 118 (387)
T 3moi_A 71 ASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHL 118 (387)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCE
T ss_pred cCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeE
Confidence 99999999999999999999999999 889999999999999988754
No 28
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=99.69 E-value=1.1e-16 Score=134.47 Aligned_cols=118 Identities=16% Similarity=0.128 Sum_probs=100.8
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
+.+|+||+|+| +|+||+.+++.+.+. ++++|++++|+.. ..+..+.. ..++++|+|++++++. .++|+|
T Consensus 10 ~~~~~rvgiiG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~~~---~~~~~~~~~~~~ll~~----~~~D~V 79 (354)
T 3q2i_A 10 TDRKIRFALVG-CGRIANNHFGALEKHADRAELIDVCDIDP--AALKAAVE---RTGARGHASLTDMLAQ----TDADIV 79 (354)
T ss_dssp CSSCEEEEEEC-CSTTHHHHHHHHHHTTTTEEEEEEECSSH--HHHHHHHH---HHCCEEESCHHHHHHH----CCCSEE
T ss_pred CCCcceEEEEc-CcHHHHHHHHHHHhCCCCeEEEEEEcCCH--HHHHHHHH---HcCCceeCCHHHHhcC----CCCCEE
Confidence 34679999999 699999999999988 8999999999653 22223321 3467889999999974 689999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+.+|+|..+.+++..++++|+||++++| +.+.++..+|.++|++.++.+
T Consensus 80 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~ 129 (354)
T 3q2i_A 80 ILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHL 129 (354)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCE
T ss_pred EECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 9999999999999999999999999999 889999999999999988754
No 29
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=99.69 E-value=1.8e-16 Score=132.73 Aligned_cols=114 Identities=16% Similarity=0.138 Sum_probs=97.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhccCCCCCC--cceeCCHHHHHhcccccCCccEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~-~~~~~eLvgvid~~~~g~~~~~l~g~~~~~g--i~v~~~l~ell~~~~~~~~~DVV 110 (163)
+|+||+|+| +|+||+.+++.+. ..++++|++++|+.. ..+..+.. .++ +.+|+|++++++. .++|+|
T Consensus 1 M~~rigiIG-~G~~g~~~~~~l~~~~~~~~l~av~d~~~--~~~~~~~~---~~g~~~~~~~~~~~ll~~----~~~D~V 70 (344)
T 3mz0_A 1 MSLRIGVIG-TGAIGKEHINRITNKLSGAEIVAVTDVNQ--EAAQKVVE---QYQLNATVYPNDDSLLAD----ENVDAV 70 (344)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHTCSSEEEEEEECSSH--HHHHHHHH---HTTCCCEEESSHHHHHHC----TTCCEE
T ss_pred CeEEEEEEC-ccHHHHHHHHHHHhhCCCcEEEEEEcCCH--HHHHHHHH---HhCCCCeeeCCHHHHhcC----CCCCEE
Confidence 368999999 5999999999998 789999999999653 12222221 344 6789999999984 679999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCe
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASM 157 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~V 157 (163)
+.+|++..+.+++..++++|+||++++| +.+.++.++|.++|++.++
T Consensus 71 ~i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~ 118 (344)
T 3mz0_A 71 LVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGK 118 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSS
T ss_pred EECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999 8899999999999999887
No 30
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=99.69 E-value=1.3e-16 Score=133.59 Aligned_cols=116 Identities=12% Similarity=0.135 Sum_probs=98.3
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-eeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~~~l~ell~~~~~~~~~DVVID 112 (163)
+|+||+|+| +|+||+.+++.+.+.++++|++++|+.. ..+..+.. .++++ +|+|++++++. .++|+|+.
T Consensus 1 M~~rvgiIG-~G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~~---~~~~~~~~~~~~~ll~~----~~~D~V~i 70 (344)
T 3ezy_A 1 MSLRIGVIG-LGRIGTIHAENLKMIDDAILYAISDVRE--DRLREMKE---KLGVEKAYKDPHELIED----PNVDAVLV 70 (344)
T ss_dssp -CEEEEEEC-CSHHHHHHHHHGGGSTTEEEEEEECSCH--HHHHHHHH---HHTCSEEESSHHHHHHC----TTCCEEEE
T ss_pred CeeEEEEEc-CCHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHHH---HhCCCceeCCHHHHhcC----CCCCEEEE
Confidence 368999999 6999999999999999999999999653 12222221 34554 79999999974 68999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..++++|+||++++| +.+.++..+|.++|++.++.+
T Consensus 71 ~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~ 118 (344)
T 3ezy_A 71 CSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVIL 118 (344)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCE
T ss_pred cCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcE
Confidence 99999999999999999999999999 899999999999999988754
No 31
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=99.69 E-value=1.4e-16 Score=134.35 Aligned_cols=121 Identities=12% Similarity=0.168 Sum_probs=97.7
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC-CcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV-GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~-g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
..+++||+|+| +|+||+.+++.+...++++|++++|+... .+...+..+. +..+.+|+|++++++. .++|+|
T Consensus 3 ~~~~~~vgiiG-~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~--~~~~~~~~~~~~ll~~----~~~D~V 75 (362)
T 1ydw_A 3 TETQIRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNY--PESTKIHGSYESLLED----PEIDAL 75 (362)
T ss_dssp ---CEEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTC--CTTCEEESSHHHHHHC----TTCCEE
T ss_pred CCCceEEEEEC-chHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCC--CCCCeeeCCHHHHhcC----CCCCEE
Confidence 34679999999 59999999999999999999999996431 1122222221 1135678999999973 689999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+.+|++..+.+++..|+++|+||++++| +++.++.++|.++|++.++++
T Consensus 76 ~i~tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~ 125 (362)
T 1ydw_A 76 YVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQI 125 (362)
T ss_dssp EECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCE
T ss_pred EEcCChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEE
Confidence 9999999999999999999999999998 789999999999999998765
No 32
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=99.69 E-value=4.1e-16 Score=130.02 Aligned_cols=116 Identities=11% Similarity=0.108 Sum_probs=96.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHH--------hcccccC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVL--------GSISQSK 105 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell--------~~~~~~~ 105 (163)
.|+||+|+|+.|+||+.+++.+... +.+|++++|+...-. .... ...++.+|+|+++++ + +.
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~---~~~~--~~~~~~~~~~~~~ll~~~~~l~~~----~~ 71 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVG---LVDS--FFPEAEFFTEPEAFEAYLEDLRDR----GE 71 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG---GGGG--TCTTCEEESCHHHHHHHHHHHHHT----TC
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHH---HHHh--hCCCCceeCCHHHHHHHhhhhccc----CC
Confidence 4799999995478999999999875 799999999654211 1111 123678899999998 4 37
Q ss_pred CccEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
++|+|+.+|++..+.++++.|+++||||+++|| +.+.++.++|.++|++.++++
T Consensus 72 ~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 126 (312)
T 3o9z_A 72 GVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRV 126 (312)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCE
T ss_pred CCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEE
Confidence 999999999999999999999999999999999 889999999999999988743
No 33
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=99.69 E-value=2.4e-16 Score=132.27 Aligned_cols=116 Identities=19% Similarity=0.171 Sum_probs=96.6
Q ss_pred CCeeEEEEcCCCHHHHH-HHH-HHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRA-AVI-AVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~-i~~-~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+|+||+|+| +|+||+. +++ .+...++++|++++|+... .. +... ...++++|+|++++++. .++|+|+
T Consensus 1 m~~rvgiiG-~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~--~~-~~~~--~~~~~~~~~~~~~ll~~----~~~D~V~ 70 (345)
T 3f4l_A 1 MVINCAFIG-FGKSTTRYHLPYVLNRKDSWHVAHIFRRHAK--PE-EQAP--IYSHIHFTSDLDEVLND----PDVKLVV 70 (345)
T ss_dssp -CEEEEEEC-CSHHHHHHTHHHHTTCTTTEEEEEEECSSCC--GG-GGSG--GGTTCEEESCTHHHHTC----TTEEEEE
T ss_pred CceEEEEEe-cCHHHHHHHHHHHHhcCCCeEEEEEEcCCHh--HH-HHHH--hcCCCceECCHHHHhcC----CCCCEEE
Confidence 479999999 6999985 888 5677899999999997532 11 1111 13467899999999974 6799999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+|++..+.+++..|+++|+||++++| +.+.++.++|.++|++.++.+
T Consensus 71 i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 119 (345)
T 3f4l_A 71 VCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTV 119 (345)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCE
T ss_pred EcCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 999889999999999999999999999 789999999999999988755
No 34
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=99.68 E-value=6.9e-17 Score=135.28 Aligned_cols=115 Identities=16% Similarity=0.114 Sum_probs=93.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-------EEEEEEecCCCCcchhhhccCCCCCCc-ceeCCHHHHHhcccccCC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-------EVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKA 106 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-------eLvgvid~~~~g~~~~~l~g~~~~~gi-~v~~~l~ell~~~~~~~~ 106 (163)
++||||+| +|+||+.|++.+...|++ +|++++|++. ..+..+.. .+++ .+|+|++++++. ++
T Consensus 6 klrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~--~~a~~~a~---~~g~~~~~~d~~~ll~~----~~ 75 (390)
T 4h3v_A 6 NLGIGLIG-YAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDA--EAVRAAAG---KLGWSTTETDWRTLLER----DD 75 (390)
T ss_dssp EEEEEEEC-HHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSH--HHHHHHHH---HHTCSEEESCHHHHTTC----TT
T ss_pred cCcEEEEc-CCHHHHHHHHHHHhCccccccccCceEEEEEcCCH--HHHHHHHH---HcCCCcccCCHHHHhcC----CC
Confidence 48999999 699999999999887764 9999999653 22222221 3454 479999999984 78
Q ss_pred ccEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHH---hhhcCeEE
Q 031216 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAF---CDKASMVS 159 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~---A~~~~Vv~ 159 (163)
+|+|+.+|++..+.+++..|+++||||+++|| +.+.++.++|.++ +++.++++
T Consensus 76 iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~ 132 (390)
T 4h3v_A 76 VQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRS 132 (390)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCce
Confidence 99999899999999999999999999999999 8899999999666 55566543
No 35
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=99.68 E-value=5.4e-16 Score=128.80 Aligned_cols=114 Identities=13% Similarity=0.118 Sum_probs=96.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCc-ceeCCHHHHHhcccccCCccEEEEc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi-~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
|+||+|+| +|+||+.+++.+.+.+++++++++|++. ....++.. ..++ .+|+|+++++ . .++|+|+.+
T Consensus 1 ~~~vgiiG-~G~~g~~~~~~l~~~~~~~~~~v~d~~~--~~~~~~~~---~~~~~~~~~~~~~~l-~----~~~D~V~i~ 69 (325)
T 2ho3_A 1 MLKLGVIG-TGAISHHFIEAAHTSGEYQLVAIYSRKL--ETAATFAS---RYQNIQLFDQLEVFF-K----SSFDLVYIA 69 (325)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTTSEEEEEEECSSH--HHHHHHGG---GSSSCEEESCHHHHH-T----SSCSEEEEC
T ss_pred CeEEEEEe-CCHHHHHHHHHHHhCCCeEEEEEEeCCH--HHHHHHHH---HcCCCeEeCCHHHHh-C----CCCCEEEEe
Confidence 68999999 5999999999999899999999999643 12223321 3443 6789999998 3 589999999
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|+|..+.+++..++++|+||++++| ..+.++.++|.++|++.++++
T Consensus 70 tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~ 116 (325)
T 2ho3_A 70 SPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFI 116 (325)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCE
T ss_pred CChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEE
Confidence 9999999999999999999999998 789999999999999988754
No 36
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=99.68 E-value=9.6e-17 Score=140.95 Aligned_cols=123 Identities=20% Similarity=0.193 Sum_probs=99.5
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc----cCC----------------CCCCcceeC
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC----DME----------------QPLEIPVMS 92 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~----g~~----------------~~~gi~v~~ 92 (163)
.+++||||+| +|+||+.+++.+.+.++++|++++|++.. .+..+. |.. ....+.+|+
T Consensus 21 ~k~IRVGIIG-aG~iG~~~~~~l~~~~~veLvAV~D~~~e--ra~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~ 97 (446)
T 3upl_A 21 GKPIRIGLIG-AGEMGTDIVTQVARMQGIEVGALSARRLP--NTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTD 97 (446)
T ss_dssp TCCEEEEEEC-CSHHHHHHHHHHTTSSSEEEEEEECSSTH--HHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEES
T ss_pred CCceEEEEEC-ChHHHHHHHHHHhhCCCcEEEEEEeCCHH--HHHHHHHHhcCCccccccccchhhhhhhhccCCceEEC
Confidence 4579999999 59999999999999999999999996531 111111 200 012356899
Q ss_pred CHHHHHhcccccCCccEEEEccC-chhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 93 DLTMVLGSISQSKARAVVIDFTD-ASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT~-p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
|++++++. .++|+|+++|. |+.+.+++..|+++||||++++++++.++.++|.++|++.+++++.+
T Consensus 98 D~eeLL~d----~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~ 164 (446)
T 3upl_A 98 DNDLILSN----PLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLG 164 (446)
T ss_dssp CHHHHHTC----TTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CHHHHhcC----CCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeec
Confidence 99999984 78999999995 56679999999999999999888888889999999999999998653
No 37
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=99.68 E-value=5.5e-16 Score=131.13 Aligned_cols=116 Identities=21% Similarity=0.236 Sum_probs=98.3
Q ss_pred CCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCC-CcceeCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~-gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+++||+|+| +|+||+. +++.+.+.++++|++++|+.. ..+..+.. .+ +.++|+|++++++. .++|+|+
T Consensus 4 ~~~rigiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a~---~~~~~~~~~~~~~ll~~----~~vD~V~ 73 (359)
T 3m2t_A 4 SLIKVGLVG-IGAQMQENLLPSLLQMQDIRIVAACDSDL--ERARRVHR---FISDIPVLDNVPAMLNQ----VPLDAVV 73 (359)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHHHTCTTEEEEEEECSSH--HHHGGGGG---TSCSCCEESSHHHHHHH----SCCSEEE
T ss_pred CcceEEEEC-CCHHHHHHHHHHHHhCCCcEEEEEEcCCH--HHHHHHHH---hcCCCcccCCHHHHhcC----CCCCEEE
Confidence 358999999 6999985 899999999999999999643 22223321 23 56789999999984 6899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+|++..+.+++..|+++||||++++| +.+.++.++|.++|++.++.+
T Consensus 74 i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~ 122 (359)
T 3m2t_A 74 MAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVS 122 (359)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCE
T ss_pred EcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEE
Confidence 899999999999999999999999999 889999999999999988754
No 38
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=99.67 E-value=3.5e-16 Score=132.10 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=98.3
Q ss_pred CCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+|+||||+| +|+||+. +++.+...++++|++++|+.. ....+. ..++++|+|++++++. .++|+|+.
T Consensus 4 ~~~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~-----~~~~~~~~~~~~ll~~----~~vD~V~i 71 (358)
T 3gdo_A 4 DTIKVGILG-YGLSGSVFHGPLLDVLDEYQISKIMTSRT--EEVKRD-----FPDAEVVHELEEITND----PAIELVIV 71 (358)
T ss_dssp TCEEEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECSCH--HHHHHH-----CTTSEEESSTHHHHTC----TTCCEEEE
T ss_pred CcceEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHhh-----CCCCceECCHHHHhcC----CCCCEEEE
Confidence 469999999 6999996 899998899999999999753 122221 2267889999999974 78999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++++
T Consensus 72 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~ 119 (358)
T 3gdo_A 72 TTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLL 119 (358)
T ss_dssp CSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred cCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeE
Confidence 99999999999999999999999999 899999999999999988765
No 39
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=99.67 E-value=6e-16 Score=129.01 Aligned_cols=119 Identities=10% Similarity=0.185 Sum_probs=98.5
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhccCCCCCCc-ceeCCHHHHHhcccccCCcc
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARA 108 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~-~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi-~v~~~l~ell~~~~~~~~~D 108 (163)
++.+|+||+|+| +|+||+.+++.+. +.+++++++++|+.. .....+.. ..++ .+|+|++++++. .++|
T Consensus 4 ~~~~~~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~--~~~~~~a~---~~g~~~~~~~~~~~l~~----~~~D 73 (346)
T 3cea_A 4 TTRKPLRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDS--NQLEWAKN---ELGVETTYTNYKDMIDT----ENID 73 (346)
T ss_dssp -CCCCEEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCH--HHHHHHHH---TTCCSEEESCHHHHHTT----SCCS
T ss_pred CCCCcceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCH--HHHHHHHH---HhCCCcccCCHHHHhcC----CCCC
Confidence 356789999999 5999999999998 789999999999653 12222221 3455 578999999863 5899
Q ss_pred EEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhc-CeEE
Q 031216 109 VVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKA-SMVS 159 (163)
Q Consensus 109 VVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~-~Vv~ 159 (163)
+|+++|.+..+.+++..++++|+||++++| +++.++.++|.++|++. ++.+
T Consensus 74 ~V~i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~ 126 (346)
T 3cea_A 74 AIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIF 126 (346)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCE
T ss_pred EEEEeCChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeE
Confidence 999999999999999999999999999998 78999999999999998 7654
No 40
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=99.67 E-value=8.2e-16 Score=128.49 Aligned_cols=120 Identities=13% Similarity=0.137 Sum_probs=96.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhc---cc--ccCCcc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGS---IS--QSKARA 108 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~---~~--~~~~~D 108 (163)
.|+||||+|+.|+||+.+++.+... +.+|++++|+...- ..... ...++++|+|++++++. +. .+.++|
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~---~~~~~--~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD 75 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSV---GIIDS--ISPQSEFFTEFEFFLDHASNLKRDSATALD 75 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCC---GGGGG--TCTTCEEESSHHHHHHHHHHHTTSTTTSCC
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHH---HHHHh--hCCCCcEECCHHHHHHhhhhhhhccCCCCc
Confidence 4899999995478999999999875 89999999965321 12211 12367889999999820 00 026899
Q ss_pred EEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 109 VVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 109 VVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|+.+|+|..+.+++..|+++||||+++|| +.+.++.++|.++|++.++.+
T Consensus 76 ~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 127 (318)
T 3oa2_A 76 YVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRL 127 (318)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCE
T ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEE
Confidence 999999999999999999999999999999 889999999999999988743
No 41
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=99.67 E-value=3.1e-16 Score=129.93 Aligned_cols=117 Identities=19% Similarity=0.236 Sum_probs=96.8
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
+.++++||+|+| +|+||+.+++.+.+.+++++++++|+.. .....+. .. +++|+|++++++. .++|+|
T Consensus 6 ~~~~~~~igiIG-~G~~g~~~~~~l~~~~~~~~v~v~d~~~--~~~~~~~----~~-~~~~~~~~~~l~~----~~~D~V 73 (315)
T 3c1a_A 6 ANNSPVRLALIG-AGRWGKNYIRTIAGLPGAALVRLASSNP--DNLALVP----PG-CVIESDWRSVVSA----PEVEAV 73 (315)
T ss_dssp ---CCEEEEEEE-CTTTTTTHHHHHHHCTTEEEEEEEESCH--HHHTTCC----TT-CEEESSTHHHHTC----TTCCEE
T ss_pred CCCCcceEEEEC-CcHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHH----hh-CcccCCHHHHhhC----CCCCEE
Confidence 345679999999 5999999999999889999999999642 1122221 12 6678999999963 589999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+.+|+|..+.+++..++++|+||++++| ..+.++..+|.++|++.++.+
T Consensus 74 ~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~ 123 (315)
T 3c1a_A 74 IIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMV 123 (315)
T ss_dssp EEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCE
T ss_pred EEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 9999999999999999999999999998 789999999999999988754
No 42
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=99.67 E-value=3.3e-16 Score=129.22 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=96.4
Q ss_pred CCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+|+||+|+| +|+||+. +++.+.+.++++|++++|+.. ..+..+.. .++++.|+|++++++ ++|+|+.
T Consensus 5 ~~~~igiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a~---~~~~~~~~~~~~ll~------~~D~V~i 72 (308)
T 3uuw_A 5 KNIKMGMIG-LGSIAQKAYLPILTKSERFEFVGAFTPNK--VKREKICS---DYRIMPFDSIESLAK------KCDCIFL 72 (308)
T ss_dssp CCCEEEEEC-CSHHHHHHTHHHHTSCSSSEEEEEECSCH--HHHHHHHH---HHTCCBCSCHHHHHT------TCSEEEE
T ss_pred ccCcEEEEe-cCHHHHHHHHHHHHhCCCeEEEEEECCCH--HHHHHHHH---HcCCCCcCCHHHHHh------cCCEEEE
Confidence 358999999 6999996 999998889999999999653 22223221 345666999999995 8999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..++++|+||++++| +.+.++.++|.++|++.++.+
T Consensus 73 ~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~ 120 (308)
T 3uuw_A 73 HSSTETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNL 120 (308)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCE
T ss_pred eCCcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999999999999 789999999999999988654
No 43
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=99.67 E-value=1e-16 Score=137.50 Aligned_cols=114 Identities=16% Similarity=0.279 Sum_probs=92.8
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcC-CcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~-~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
.+.++||+|+| +| +|+.+++.+.+.+ +++|+|++|+.. +++.++.. .+|++.|+|++++++ ++|++
T Consensus 4 ~~~~~rv~VvG-~G-~g~~h~~a~~~~~~~~elvav~~~~~--~~a~~~a~---~~gv~~~~~~~~l~~------~~D~v 70 (372)
T 4gmf_A 4 ASPKQRVLIVG-AK-FGEMYLNAFMQPPEGLELVGLLAQGS--ARSRELAH---AFGIPLYTSPEQITG------MPDIA 70 (372)
T ss_dssp ---CEEEEEEC-ST-TTHHHHHTTSSCCTTEEEEEEECCSS--HHHHHHHH---HTTCCEESSGGGCCS------CCSEE
T ss_pred CCCCCEEEEEe-hH-HHHHHHHHHHhCCCCeEEEEEECCCH--HHHHHHHH---HhCCCEECCHHHHhc------CCCEE
Confidence 34579999999 58 7999999988876 699999999753 33344442 578999999999985 79998
Q ss_pred EEccCchhH----HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 111 IDFTDASTV----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 111 IDfT~p~~~----~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+.+|.+..+ .++++.|+++||||+++|| ++.++.++|.++|++.++.+
T Consensus 71 ~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKP-l~~~ea~~l~~~A~~~g~~~ 122 (372)
T 4gmf_A 71 CIVVRSTVAGGAGTQLARHFLARGVHVIQEHP-LHPDDISSLQTLAQEQGCCY 122 (372)
T ss_dssp EECCC--CTTSHHHHHHHHHHHTTCEEEEESC-CCHHHHHHHHHHHHHHTCCE
T ss_pred EEECCCcccchhHHHHHHHHHHcCCcEEEecC-CCHHHHHHHHHHHHHcCCEE
Confidence 877755554 7999999999999999999 78999999999999999875
No 44
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=99.67 E-value=1.8e-16 Score=137.64 Aligned_cols=122 Identities=9% Similarity=0.054 Sum_probs=98.2
Q ss_pred CCCCeeEEEEcCCCHHHH-HHHHHHHhcCCcEEEEEEecCCC-CcchhhhccCCCCCCcceeCCHHHHHhcccccCCccE
Q 031216 32 PQSNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSV-GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~-~i~~~i~~~~~~eLvgvid~~~~-g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DV 109 (163)
+.+++||+|+| +|+||+ .+++.+.+.++++|++++|+... .+...+..+.. ..++.+|+|++++++. .++|+
T Consensus 80 ~~~~irigiIG-~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~-~~~~~~~~~~~~ll~~----~~vD~ 153 (433)
T 1h6d_A 80 EDRRFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVD-PRKIYDYSNFDKIAKD----PKIDA 153 (433)
T ss_dssp CCCCEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCC-GGGEECSSSGGGGGGC----TTCCE
T ss_pred CCCceEEEEEC-CcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC-cccccccCCHHHHhcC----CCCCE
Confidence 45679999999 599997 89999988899999999996531 12222222221 1123478999999874 68999
Q ss_pred EEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|+.+|.+..+.+++..|+++|+||++++| +++.++.++|.++|++.++++
T Consensus 154 V~iatp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 204 (433)
T 1h6d_A 154 VYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKL 204 (433)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred EEEcCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeE
Confidence 99999999999999999999999999998 789999999999999988754
No 45
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=99.66 E-value=1.6e-15 Score=125.91 Aligned_cols=114 Identities=18% Similarity=0.245 Sum_probs=96.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+++||+|+|++|+||+.+++.+.+. ++++++.+++...|. + ..|+++|+|++++.++ .++|++++|
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~~g~---~------~~G~~vy~sl~el~~~----~~~D~viI~ 71 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGT---T------HLGLPVFNTVREAVAA----TGATASVIY 71 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC---E------ETTEEEESSHHHHHHH----HCCCEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCcccc---e------eCCeeccCCHHHHhhc----CCCCEEEEe
Confidence 4589999998899999999998876 799998888643222 1 3578999999999853 489999999
Q ss_pred cCchhHHHHHHHHHHcCCcE-EEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 114 TDASTVYDNVKQATAFGMRS-VVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~v-Vigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
++|+.+.+.+..|+++|+++ |+.|+|++.++.++|.++|++.++.+-|
T Consensus 72 tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liG 120 (288)
T 2nu8_A 72 VPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIG 120 (288)
T ss_dssp CCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 99999999999999999997 5667799999899999999999985543
No 46
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=99.66 E-value=8.7e-16 Score=127.22 Aligned_cols=114 Identities=15% Similarity=0.255 Sum_probs=94.3
Q ss_pred CCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+++||+|+| +|+||+. +++.+.+.++++|++++|+... ...++.. ..++++|++++++ . .++|+|+.
T Consensus 4 ~~~~vgiiG-~G~~g~~~~~~~l~~~~~~~lvav~d~~~~--~~~~~~~---~~g~~~~~~~~~l-~-----~~~D~V~i 71 (319)
T 1tlt_A 4 KKLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRA--KALPICE---SWRIPYADSLSSL-A-----ASCDAVFV 71 (319)
T ss_dssp -CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCT--THHHHHH---HHTCCBCSSHHHH-H-----TTCSEEEE
T ss_pred CcceEEEEC-CCHHHHHHHHHHHHhCCCeEEEEEECCCHH--HHHHHHH---HcCCCccCcHHHh-h-----cCCCEEEE
Confidence 368999999 5999996 9999988899999999996532 2222221 3356678999877 4 58999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..++++|+||++++| +++.++.++|.++|++.++.+
T Consensus 72 ~tp~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~ 119 (319)
T 1tlt_A 72 HSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTL 119 (319)
T ss_dssp CSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred eCCchhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 99889999999999999999999998 789999999999999988755
No 47
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=99.65 E-value=6.3e-16 Score=134.22 Aligned_cols=123 Identities=14% Similarity=0.095 Sum_probs=97.6
Q ss_pred CCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCC---CcceeC----CHHHHHhccc
Q 031216 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL---EIPVMS----DLTMVLGSIS 102 (163)
Q Consensus 30 ~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~---gi~v~~----~l~ell~~~~ 102 (163)
.++.+++||+|+| +|+||+.+++.+...++++|++++|+.. ..+..+....... +..+|+ |++++++.
T Consensus 15 ~~~~~~~rvgiIG-~G~~g~~h~~~l~~~~~~~lvav~d~~~--~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~-- 89 (444)
T 2ixa_A 15 DFNPKKVRIAFIA-VGLRGQTHVENMARRDDVEIVAFADPDP--YMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKD-- 89 (444)
T ss_dssp ----CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSCH--HHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTC--
T ss_pred cCCCCCceEEEEe-cCHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcC--
Confidence 3455679999999 6999999999999999999999999653 1222211100011 256788 99999974
Q ss_pred ccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 103 QSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 103 ~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.++|+|+.+|++..+.+++..|+++||||++++| ..+.++.++|.++|++.++.+
T Consensus 90 --~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~ 145 (444)
T 2ixa_A 90 --KNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPL 145 (444)
T ss_dssp --TTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCE
T ss_pred --CCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 6899999999999999999999999999999999 789999999999999988654
No 48
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=99.64 E-value=3.6e-16 Score=132.50 Aligned_cols=118 Identities=15% Similarity=0.258 Sum_probs=98.2
Q ss_pred CCCeeEEEEcCCCHHHHH-HH----HHHHhcCCcEEE---------EEEecCCCCcchhhhccCCCCCCcc-eeCCHHHH
Q 031216 33 QSNIKVIINGAVKEIGRA-AV----IAVTKARGMEVA---------GAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMV 97 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~-i~----~~i~~~~~~eLv---------gvid~~~~g~~~~~l~g~~~~~gi~-v~~~l~el 97 (163)
.+++||+|+|++|.||+. ++ +.+.+.++++|+ +++|+.. ..+..+.. .++++ +|+|++++
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~--~~a~~~a~---~~~~~~~~~~~~~l 78 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSA--EKVEALAK---RFNIARWTTDLDAA 78 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSS--HHHHHHHH---HTTCCCEESCHHHH
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCH--HHHHHHHH---HhCCCcccCCHHHH
Confidence 457999999977999998 88 899888888765 6888643 22333321 45664 79999999
Q ss_pred HhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 98 LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 98 l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
++. .++|+|+.+|++..+.+++..|+++||||+++|| +++.++.++|.++|++.++.+
T Consensus 79 l~~----~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~ 137 (383)
T 3oqb_A 79 LAD----KNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKH 137 (383)
T ss_dssp HHC----SSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred hcC----CCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 984 7899999999999999999999999999999999 789999999999999988753
No 49
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=99.64 E-value=3.9e-15 Score=123.77 Aligned_cols=113 Identities=14% Similarity=0.152 Sum_probs=96.8
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+..||+|+|++|+||+.+++.+.+. ++++++.+++...|. + ..|+++|.+++++.++ .++|++|+|
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~g~---~------i~G~~vy~sl~el~~~----~~~Dv~Ii~ 71 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGM---E------VLGVPVYDTVKEAVAH----HEVDASIIF 71 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC---E------ETTEEEESSHHHHHHH----SCCSEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCCCc---e------ECCEEeeCCHHHHhhc----CCCCEEEEe
Confidence 4589999999999999999998875 899888888653221 1 2578999999998863 489999999
Q ss_pred cCchhHHHHHHHHHHcCCc-EEEeCCCCCHHHHHHHHHHhhhcCeEEc
Q 031216 114 TDASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~-vVigttg~~~e~~~~L~~~A~~~~Vv~t 160 (163)
++|+.+.+.++.|+++|++ +|+.|+|++.++.++|.++|++.++.+-
T Consensus 72 vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 72 VPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999 7888999999989999999999998443
No 50
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=99.63 E-value=1.3e-15 Score=130.29 Aligned_cols=121 Identities=17% Similarity=0.169 Sum_probs=97.7
Q ss_pred CCCeeEEEEcCCCH---HHHHHHHHHHhcCCcEEEE-EEecCCCCcchhhhccCCCCCCc---ceeCCHHHHHhccc-cc
Q 031216 33 QSNIKVIINGAVKE---IGRAAVIAVTKARGMEVAG-AIDSHSVGEDIGMVCDMEQPLEI---PVMSDLTMVLGSIS-QS 104 (163)
Q Consensus 33 ~~~irV~VvGa~G~---mG~~i~~~i~~~~~~eLvg-vid~~~~g~~~~~l~g~~~~~gi---~v~~~l~ell~~~~-~~ 104 (163)
-+++||||+| +|+ ||+.++..+...++++|++ ++|+.. ..+.++.. .+++ .+|+|++++++.-. ++
T Consensus 10 m~~~rvgiiG-~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~--~~a~~~a~---~~g~~~~~~~~~~~~ll~~~~~~~ 83 (398)
T 3dty_A 10 PQPIRWAMVG-GGSQSQIGYIHRCAALRDNTFVLVAGAFDIDP--IRGSAFGE---QLGVDSERCYADYLSMFEQEARRA 83 (398)
T ss_dssp CSCEEEEEEE-CCTTCSSHHHHHHHHHGGGSEEEEEEECCSSH--HHHHHHHH---HTTCCGGGBCSSHHHHHHHHTTCT
T ss_pred cCcceEEEEc-CCccchhHHHHHHHHhhCCCeEEEEEEeCCCH--HHHHHHHH---HhCCCcceeeCCHHHHHhcccccC
Confidence 4579999999 699 9999999999899999998 677542 12222221 3455 68999999997200 00
Q ss_pred CCccEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.++|+|+.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++++
T Consensus 84 ~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 139 (398)
T 3dty_A 84 DGIQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIV 139 (398)
T ss_dssp TCCSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCE
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeE
Confidence 2599999899999999999999999999999999 889999999999999988754
No 51
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=99.63 E-value=7.6e-16 Score=128.78 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=94.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC--CCcchhhhccCCCCCC--cceeCCHHHHHhcccccCCccE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAV 109 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~--~g~~~~~l~g~~~~~g--i~v~~~l~ell~~~~~~~~~DV 109 (163)
+|+||+|+| +|.+|+.+++.+ .++++|++++|+.. ..+...+... .++ .++|+|++++++. .++|+
T Consensus 1 M~~rvgiiG-~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ll~~----~~vD~ 70 (337)
T 3ip3_A 1 MSLKICVIG-SSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAIS---EMNIKPKKYNNWWEMLEK----EKPDI 70 (337)
T ss_dssp -CEEEEEEC-SSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHH---TTTCCCEECSSHHHHHHH----HCCSE
T ss_pred CceEEEEEc-cchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHH---HcCCCCcccCCHHHHhcC----CCCCE
Confidence 479999999 588888898887 89999999999643 2223333321 223 4789999999984 68999
Q ss_pred EEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCe
Q 031216 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASM 157 (163)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~V 157 (163)
|+.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++
T Consensus 71 V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 119 (337)
T 3ip3_A 71 LVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRN 119 (337)
T ss_dssp EEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTT
T ss_pred EEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 99899889999999999999999999999 7899999999999999886
No 52
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=99.63 E-value=1.8e-15 Score=128.12 Aligned_cols=114 Identities=11% Similarity=0.118 Sum_probs=94.1
Q ss_pred CeeEEEEcCCCHHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCC-cceeCCHHHHHhcccccCCccEEEE
Q 031216 35 NIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE-IPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 35 ~irV~VvGa~G~mG~-~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~g-i~v~~~l~ell~~~~~~~~~DVVID 112 (163)
++||||+| +|++|. .++..+. .++++|++++|+.. ..+.++.. .++ .++|+|++++++. +++|+|+.
T Consensus 26 ~irvgiiG-~G~~~~~~~~~~~~-~~~~~lvav~d~~~--~~a~~~a~---~~~~~~~~~~~~~ll~~----~~vD~V~I 94 (361)
T 3u3x_A 26 ELRFAAVG-LNHNHIYGQVNCLL-RAGARLAGFHEKDD--ALAAEFSA---VYADARRIATAEEILED----ENIGLIVS 94 (361)
T ss_dssp CCEEEEEC-CCSTTHHHHHHHHH-HTTCEEEEEECSCH--HHHHHHHH---HSSSCCEESCHHHHHTC----TTCCEEEE
T ss_pred CcEEEEEC-cCHHHHHHHHHHhh-cCCcEEEEEEcCCH--HHHHHHHH---HcCCCcccCCHHHHhcC----CCCCEEEE
Confidence 58999999 699995 4566665 69999999999653 22233321 333 5789999999984 68999998
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|++..+.+++..|+++||||++++| +.+.++.++|.++|++.++++
T Consensus 95 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 142 (361)
T 3u3x_A 95 AAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIF 142 (361)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCE
T ss_pred eCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 99888999999999999999999999 889999999999999988765
No 53
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=99.62 E-value=3.5e-15 Score=123.70 Aligned_cols=113 Identities=17% Similarity=0.149 Sum_probs=93.7
Q ss_pred eeEEEEcCCCHHHHHH-HHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-eeCCHHHHHhcccccCCccEEEEc
Q 031216 36 IKVIINGAVKEIGRAA-VIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 36 irV~VvGa~G~mG~~i-~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+||+|+| +|+||+.+ ++.+.+ +++++++++|++. ....++.. ..+++ +|+|+++++.. .++|+|+.+
T Consensus 1 ~~vgiiG-~G~~g~~~~~~~l~~-~~~~~vav~d~~~--~~~~~~~~---~~g~~~~~~~~~~~l~~----~~~D~V~i~ 69 (332)
T 2glx_A 1 NRWGLIG-ASTIAREWVIGAIRA-TGGEVVSMMSTSA--ERGAAYAT---ENGIGKSVTSVEELVGD----PDVDAVYVS 69 (332)
T ss_dssp CEEEEES-CCHHHHHTHHHHHHH-TTCEEEEEECSCH--HHHHHHHH---HTTCSCCBSCHHHHHTC----TTCCEEEEC
T ss_pred CeEEEEc-ccHHHHHhhhHHhhc-CCCeEEEEECCCH--HHHHHHHH---HcCCCcccCCHHHHhcC----CCCCEEEEe
Confidence 5899999 59999998 888887 9999999999653 12222221 34554 78999999863 579999999
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|+|..+.+++..++++|+||++++| +.+.++.++|.++|++.++.+
T Consensus 70 tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~ 116 (332)
T 2glx_A 70 TTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVL 116 (332)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCE
T ss_pred CChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 9999999999999999999999998 789999999999999988654
No 54
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=99.61 E-value=2.6e-15 Score=125.77 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=91.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+++||+|+| +|+||+.+++.+.+.++++|++++|+.... .+ ..++++|+|+++++. ++|+||++
T Consensus 2 ~~irV~IiG-~G~mG~~~~~~l~~~~~~elvav~d~~~~~----~~-----~~gv~~~~d~~~ll~------~~DvViia 65 (320)
T 1f06_A 2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL----DT-----KTPVFDVADVDKHAD------DVDVLFLC 65 (320)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC----SS-----SSCEEEGGGGGGTTT------TCSEEEEC
T ss_pred CCCEEEEEe-ecHHHHHHHHHHhcCCCCEEEEEEcCCHHH----hh-----cCCCceeCCHHHHhc------CCCEEEEc
Confidence 368999999 599999999999999999999999975321 11 135777889988773 89999999
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHH-HHHHHHhhhcCeE
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETV-SALSAFCDKASMV 158 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~-~~L~~~A~~~~Vv 158 (163)
|.|..+.+++..++++|+|+|+++| +.+.++. ++|.++|++.+.+
T Consensus 66 tp~~~h~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v 112 (320)
T 1f06_A 66 MGSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNV 112 (320)
T ss_dssp SCTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCE
T ss_pred CCcHHHHHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCE
Confidence 9999899999999999999999998 5677777 8999999986633
No 55
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=99.61 E-value=5.3e-15 Score=123.30 Aligned_cols=115 Identities=12% Similarity=0.104 Sum_probs=93.8
Q ss_pred CCeeEEEEcCCCHHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCC-CcceeCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~-~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~-gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+++||+|+| +|.||. .+++.+. .++++|++++|+... .+..+.. .+ ++++|+|++++++. .++|+|+
T Consensus 3 ~~~rvgiiG-~G~~~~~~~~~~l~-~~~~~lvav~d~~~~--~~~~~a~---~~~~~~~~~~~~~ll~~----~~~D~V~ 71 (336)
T 2p2s_A 3 KKIRFAAIG-LAHNHIYDMCQQLI-DAGAELAGVFESDSD--NRAKFTS---LFPSVPFAASAEQLITD----ASIDLIA 71 (336)
T ss_dssp -CCEEEEEC-CSSTHHHHHHHHHH-HTTCEEEEEECSCTT--SCHHHHH---HSTTCCBCSCHHHHHTC----TTCCEEE
T ss_pred CccEEEEEC-CChHHHHHhhhhhc-CCCcEEEEEeCCCHH--HHHHHHH---hcCCCcccCCHHHHhhC----CCCCEEE
Confidence 368999999 599996 5777775 689999999996532 2222221 22 56789999999974 6899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+|++..+.+++..|+++|+||++++| ..+.++.++|.++|++.++.+
T Consensus 72 i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (336)
T 2p2s_A 72 CAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKF 120 (336)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCE
T ss_pred EeCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 899889999999999999999999998 789999999999999988754
No 56
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=99.61 E-value=1.3e-14 Score=121.02 Aligned_cols=112 Identities=19% Similarity=0.251 Sum_probs=95.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCC-ccEEEEc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA-RAVVIDF 113 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~-~DVVIDf 113 (163)
+.|++|+|++|+||+.+++.+.+. ++++++.+++...|. + -.|+++|.|++++.+. .+ +|++|+|
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~g~---~------i~G~~vy~sl~el~~~----~~~~DvaIi~ 78 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKGGS---E------VHGVPVYDSVKEALAE----HPEINTSIVF 78 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC---E------ETTEEEESSHHHHHHH----CTTCCEEEEC
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCCCc---e------ECCEeeeCCHHHHhhc----CCCCCEEEEe
Confidence 478999999999999999998875 899888888543222 1 2478999999998852 24 9999999
Q ss_pred cCchhHHHHHHHHHHcCCc-EEEeCCCCCHHHHHHHHHHhhhcCeEEc
Q 031216 114 TDASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~-vVigttg~~~e~~~~L~~~A~~~~Vv~t 160 (163)
++|+.+.+.++.|+++|++ +|+.|+|++.++.++|.++|++.++.+-
T Consensus 79 vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 79 VPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp CCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999 8888999999999999999999998444
No 57
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=99.61 E-value=3e-15 Score=129.10 Aligned_cols=120 Identities=19% Similarity=0.176 Sum_probs=95.6
Q ss_pred CCeeEEEEcCCCH---HHHHHHHHHHhcCCcEEEE-EEecCCCCcchhhhccCCCCCCc---ceeCCHHHHHhccc-ccC
Q 031216 34 SNIKVIINGAVKE---IGRAAVIAVTKARGMEVAG-AIDSHSVGEDIGMVCDMEQPLEI---PVMSDLTMVLGSIS-QSK 105 (163)
Q Consensus 34 ~~irV~VvGa~G~---mG~~i~~~i~~~~~~eLvg-vid~~~~g~~~~~l~g~~~~~gi---~v~~~l~ell~~~~-~~~ 105 (163)
+++||+|+| +|+ ||+.++..+...++++|++ ++|+.. ..+.++.. .+++ .+|+|++++++.-. ...
T Consensus 36 ~~~rvgiiG-~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~--~~a~~~a~---~~g~~~~~~~~~~~~ll~~~~~~~~ 109 (417)
T 3v5n_A 36 KRIRLGMVG-GGSGAFIGAVHRIAARLDDHYELVAGALSSTP--EKAEASGR---ELGLDPSRVYSDFKEMAIREAKLKN 109 (417)
T ss_dssp CCEEEEEES-CC--CHHHHHHHHHHHHTSCEEEEEEECCSSH--HHHHHHHH---HHTCCGGGBCSCHHHHHHHHHHCTT
T ss_pred CcceEEEEc-CCCchHHHHHHHHHHhhCCCcEEEEEEeCCCH--HHHHHHHH---HcCCCcccccCCHHHHHhcccccCC
Confidence 468999999 699 9999999999889999997 777642 12222221 3455 58999999997200 003
Q ss_pred CccEEEEccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
++|+|+.+|++..+.+++..|+++||||+++|| +.+.++.++|.++|++.++.+
T Consensus 110 ~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 164 (417)
T 3v5n_A 110 GIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALF 164 (417)
T ss_dssp CCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCE
T ss_pred CCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEE
Confidence 699999999999999999999999999999999 889999999999999988754
No 58
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=99.60 E-value=2.6e-15 Score=130.36 Aligned_cols=117 Identities=11% Similarity=0.091 Sum_probs=97.8
Q ss_pred CCeeEEEEcC---CCHHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhccCCCCCCc---ceeCCHHHHHhcccccCC
Q 031216 34 SNIKVIINGA---VKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEI---PVMSDLTMVLGSISQSKA 106 (163)
Q Consensus 34 ~~irV~VvGa---~G~mG~~i~~~i~~~-~~~eLvgvid~~~~g~~~~~l~g~~~~~gi---~v~~~l~ell~~~~~~~~ 106 (163)
+++||+|+|+ .|.||+.+++.+.+. ++++|++++|+.. ..+..+.. .+++ .+|+|++++++. .+
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~a~---~~g~~~~~~~~~~~~ll~~----~~ 89 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKI--ETSIATIQ---RLKLSNATAFPTLESFASS----ST 89 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSH--HHHHHHHH---HTTCTTCEEESSHHHHHHC----SS
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCH--HHHHHHHH---HcCCCcceeeCCHHHHhcC----CC
Confidence 4599999994 299999999999998 9999999999643 11222221 2344 489999999974 68
Q ss_pred ccEEEEccCchhHHHHHHHHHHcC------CcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 107 RAVVIDFTDASTVYDNVKQATAFG------MRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G------~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|+|+.+|.+..+.+++..|+++| |||++++| +.+.++.++|.++|++.++++
T Consensus 90 vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~ 149 (438)
T 3btv_A 90 IDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQT 149 (438)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEE
T ss_pred CCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeE
Confidence 999999998899999999999999 99999998 789999999999999998765
No 59
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=1.2e-14 Score=121.04 Aligned_cols=112 Identities=18% Similarity=0.275 Sum_probs=95.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
..|++|+|++|+||+.+++.+.+ .++++++.+++...|. + -.|+++|.|++++.++ .++|++|+|+
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~-~g~~~V~~VnP~~~g~---~------i~G~~vy~sl~el~~~----~~~Dv~ii~v 78 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLE-CGTKIVGGVTPGKGGQ---N------VHGVPVFDTVKEAVKE----TDANASVIFV 78 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHH-TTCCEEEEECTTCTTC---E------ETTEEEESSHHHHHHH----HCCCEEEECC
T ss_pred CCEEEEECCCCCHHHHHHHHHHh-CCCeEEEEeCCCCCCc---e------ECCEeeeCCHHHHhhc----CCCCEEEEcc
Confidence 46899999999999999999886 4888888887543222 1 2478999999999853 4899999999
Q ss_pred CchhHHHHHHHHHHcCCc-EEEeCCCCCHHHHHHHHHHhhhcCeEEc
Q 031216 115 DASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~-vVigttg~~~e~~~~L~~~A~~~~Vv~t 160 (163)
+|+.+.+.++.|+++|++ +|+.|+|++.++.++|.++|++.++.+-
T Consensus 79 p~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 79 PAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 999999999999999999 7778889999999999999999998544
No 60
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=99.56 E-value=1.1e-14 Score=121.26 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=86.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+++||+|+| +|+||+.+++.+.++++++|++++|+... .+.. .+++ +.+++++++. .++|+|+++
T Consensus 8 ~~irv~IIG-~G~iG~~~~~~l~~~~~~elvav~d~~~~--~~~~-------~g~~-~~~~~~l~~~----~~~DvViia 72 (304)
T 3bio_A 8 KKIRAAIVG-YGNIGRYALQALREAPDFEIAGIVRRNPA--EVPF-------ELQP-FRVVSDIEQL----ESVDVALVC 72 (304)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECC----------------CCTT-SCEESSGGGS----SSCCEEEEC
T ss_pred CCCEEEEEC-ChHHHHHHHHHHhcCCCCEEEEEEcCCHH--HHHH-------cCCC-cCCHHHHHhC----CCCCEEEEC
Confidence 369999999 69999999999999999999999996432 1111 2333 2333333331 489999999
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeE
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv 158 (163)
|.+..+.+++..++++|+||++++| +.+.++..+|.+++++.+++
T Consensus 73 tp~~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~ 119 (304)
T 3bio_A 73 SPSREVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAA 119 (304)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCE
T ss_pred CCchhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCE
Confidence 9999999999999999999999997 57889999999999998854
No 61
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=99.55 E-value=8.7e-15 Score=123.78 Aligned_cols=123 Identities=15% Similarity=0.135 Sum_probs=91.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhc--------CCcEEEEEEecCCCC---cchhhhccCCCCCCcceeC--CHHHHHhc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKA--------RGMEVAGAIDSHSVG---EDIGMVCDMEQPLEIPVMS--DLTMVLGS 100 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~--------~~~eLvgvid~~~~g---~~~~~l~g~~~~~gi~v~~--~l~ell~~ 100 (163)
+|+||+|+| +|.||+.+++.+.+. ++++|++++|++..- .+..++.... .....+|+ |++++++.
T Consensus 1 ~mirvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~-~~~~~~~~~~d~~~ll~~ 78 (327)
T 3do5_A 1 GMIKIAIVG-FGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMK-RETGMLRDDAKAIEVVRS 78 (327)
T ss_dssp -CEEEEEEC-CSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHH-HHHSSCSBCCCHHHHHHH
T ss_pred CcEEEEEEe-ccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhh-ccCccccCCCCHHHHhcC
Confidence 389999999 699999999999988 899999999965211 1112211100 01123555 99999975
Q ss_pred ccccCCccEEEEccCchhH----HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe--EEcCC
Q 031216 101 ISQSKARAVVIDFTDASTV----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM--VSTGS 162 (163)
Q Consensus 101 ~~~~~~~DVVIDfT~p~~~----~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V--v~tg~ 162 (163)
.++|+|+|+|+++.+ .+++..|+++|+|||+++.+.-..+.++|.++|++.++ +|.++
T Consensus 79 ----~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~ 142 (327)
T 3do5_A 79 ----ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEAT 142 (327)
T ss_dssp ----SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGG
T ss_pred ----CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEE
Confidence 789999999977765 89999999999999999765444578999999999887 44444
No 62
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=99.53 E-value=3.5e-14 Score=117.85 Aligned_cols=113 Identities=13% Similarity=0.177 Sum_probs=89.9
Q ss_pred CeeEEEEcCCCHHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-eCCHHHHHhcccccCCccEEEE
Q 031216 35 NIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 35 ~irV~VvGa~G~mG~-~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-~~~l~ell~~~~~~~~~DVVID 112 (163)
|+||+|+| +|+||+ .+++.+.+.++++|+ ++|+.. .....+.. .++++. +.+..+++. .++|+|+.
T Consensus 2 ~~~igiIG-~G~ig~~~~~~~l~~~~~~~l~-v~d~~~--~~~~~~a~---~~g~~~~~~~~~~~l~-----~~~D~V~i 69 (323)
T 1xea_A 2 SLKIAMIG-LGDIAQKAYLPVLAQWPDIELV-LCTRNP--KVLGTLAT---RYRVSATCTDYRDVLQ-----YGVDAVMI 69 (323)
T ss_dssp CEEEEEEC-CCHHHHHTHHHHHTTSTTEEEE-EECSCH--HHHHHHHH---HTTCCCCCSSTTGGGG-----GCCSEEEE
T ss_pred CcEEEEEC-CCHHHHHHHHHHHHhCCCceEE-EEeCCH--HHHHHHHH---HcCCCccccCHHHHhh-----cCCCEEEE
Confidence 68999999 599998 599999888999999 998643 12222221 334543 445445554 58999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHHHHHhhhcCeEE
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|.|..+.+++..++++|+||++++| ..+.++.++|.++|++.++.+
T Consensus 70 ~tp~~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~ 117 (323)
T 1xea_A 70 HAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPL 117 (323)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred ECCchhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeE
Confidence 99999999999999999999999998 678999999999999988654
No 63
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.51 E-value=1.1e-13 Score=110.69 Aligned_cols=102 Identities=17% Similarity=0.224 Sum_probs=84.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||+++| +|+||+.+++.+. .++++|++++|++.. .. . .++|++++++ .++|+|++++.
T Consensus 1 m~vgiIG-~G~mG~~~~~~l~-~~g~~lv~v~d~~~~---~~-------~----~~~~~~~l~~-----~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIG-YGAIGKFLAEWLE-RNGFEIAAILDVRGE---HE-------K----MVRGIDEFLQ-----REMDVAVEAAS 59 (236)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEECSSCC---CT-------T----EESSHHHHTT-----SCCSEEEECSC
T ss_pred CEEEEEC-CCHHHHHHHHHHh-cCCCEEEEEEecCcc---hh-------h----hcCCHHHHhc-----CCCCEEEECCC
Confidence 5899999 5999999999988 699999999996421 00 1 5789999884 38999999999
Q ss_pred chhHHHHHHHHHHcCCcEEEeCCCC-CHHHH-HHHHHHhhhcCeE
Q 031216 116 ASTVYDNVKQATAFGMRSVVYVPHI-QLETV-SALSAFCDKASMV 158 (163)
Q Consensus 116 p~~~~~~~~~al~~G~~vVigttg~-~~e~~-~~L~~~A~~~~Vv 158 (163)
+..+.+++..++++|+++|+++|+. +.++. ++|.+++++.++.
T Consensus 60 ~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 60 QQAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 9999999999999999999999964 44444 7999999886653
No 64
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=99.50 E-value=5.5e-14 Score=123.38 Aligned_cols=113 Identities=16% Similarity=0.202 Sum_probs=94.3
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhc---------CCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKA---------RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK 105 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~---------~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~ 105 (163)
++||+|+| +|.+|+.+++.+.++ ++++|++++|++. .....+. .+..+|+|++++++. .
T Consensus 10 ~irIgIIG-~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~--~~~~~~~-----~~~~~~~d~~ell~d----~ 77 (444)
T 3mtj_A 10 PIHVGLLG-LGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNL--DKAEALA-----GGLPLTTNPFDVVDD----P 77 (444)
T ss_dssp CEEEEEEC-CHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCH--HHHHHHH-----TTCCEESCTHHHHTC----T
T ss_pred cccEEEEC-CCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCH--HHhhhhc-----ccCcccCCHHHHhcC----C
Confidence 58999999 699999999887642 7999999999753 1222222 145678999999974 7
Q ss_pred CccEEEEccCc-hhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 106 ARAVVIDFTDA-STVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 106 ~~DVVIDfT~p-~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
++|+|+++|.+ +.+.+++..|+++|||||+++++++.++.++|.++|++.++.+
T Consensus 78 diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l 132 (444)
T 3mtj_A 78 EIDIVVELIGGLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMV 132 (444)
T ss_dssp TCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeE
Confidence 89999999975 7889999999999999999999888889999999999988765
No 65
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=99.44 E-value=8.7e-14 Score=117.62 Aligned_cols=118 Identities=20% Similarity=0.218 Sum_probs=87.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhc------CCcEEEEEEecCCCC----cchhhhccCCCCCC-cc--eeCCHHHHHhc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKA------RGMEVAGAIDSHSVG----EDIGMVCDMEQPLE-IP--VMSDLTMVLGS 100 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~------~~~eLvgvid~~~~g----~~~~~l~g~~~~~g-i~--v~~~l~ell~~ 100 (163)
+++||+|+| +|+||+.+++.+.+. ++++|++++|++... .+...+.......+ ++ .+ |+++++..
T Consensus 3 k~irVgIiG-~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~ 80 (325)
T 3ing_A 3 KEIRIILMG-TGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMG 80 (325)
T ss_dssp CEEEEEEEC-CSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTT
T ss_pred ceEEEEEEc-CcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcC
Confidence 469999999 799999999999876 799999999975311 12222111000011 11 23 67777763
Q ss_pred ccccCCccEEEEccCchh----HHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 101 ISQSKARAVVIDFTDAST----VYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 101 ~~~~~~~DVVIDfT~p~~----~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
.++|+|+|+|.+.. ..+++..|+++|+|||+++++...++.++|.++|++.++
T Consensus 81 ----~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~ 137 (325)
T 3ing_A 81 ----EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSK 137 (325)
T ss_dssp ----SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTC
T ss_pred ----CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCC
Confidence 78999999997643 368999999999999998887666889999999999775
No 66
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=99.43 E-value=4.3e-13 Score=113.25 Aligned_cols=117 Identities=17% Similarity=0.135 Sum_probs=87.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcC-------CcEEEEEEecCCC-Cc---chhhhccCCCCCCcc-eeC---CHHHHHh
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKAR-------GMEVAGAIDSHSV-GE---DIGMVCDMEQPLEIP-VMS---DLTMVLG 99 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~-------~~eLvgvid~~~~-g~---~~~~l~g~~~~~gi~-v~~---~l~ell~ 99 (163)
++||+|+| +|.||+.+++.+.+.+ +++|++++|++.. .. +..++.......+++ +++ |+++++
T Consensus 6 ~irvgIiG-~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll- 83 (331)
T 3c8m_A 6 TINLSIFG-LGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL- 83 (331)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH-
T ss_pred EEeEEEEe-cCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh-
Confidence 48999999 6999999999998876 7999999996531 01 111111000012342 566 999998
Q ss_pred cccccCCccEEEEccCch----hHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 100 SISQSKARAVVIDFTDAS----TVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~----~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
. .++|+|+++|.+. .+.+++..|+++|||||+.......++.++|.++|++.++
T Consensus 84 ~----~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv 141 (331)
T 3c8m_A 84 A----RDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNR 141 (331)
T ss_dssp H----SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTC
T ss_pred C----CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCC
Confidence 4 7999999999774 7789999999999999996443335788999999999885
No 67
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=99.37 E-value=1.4e-12 Score=111.33 Aligned_cols=116 Identities=14% Similarity=0.150 Sum_probs=85.3
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcC---CcEEEEEEecCCCCcchhhhccCCCCC-CcceeCCHHHHHhc--------
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKAR---GMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGS-------- 100 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~---~~eLvgvid~~~~g~~~~~l~g~~~~~-gi~v~~~l~ell~~-------- 100 (163)
.+++||+|+| +|.||+.+++.+.+.+ +++|++++|++. . .+. ..+ +++.|+++++++..
T Consensus 2 ~k~i~vgIiG-~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~---~~~---~~~~gi~~~~~~~e~l~~~~~~~~di 72 (358)
T 1ebf_A 2 TKVVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAER--S---LIS---KDFSPLNVGSDWKAALAASTTKTLPL 72 (358)
T ss_dssp CSEEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSB--E---EEC---SSCSCCSCTTCHHHHHHTCCCBCCCH
T ss_pred CceEEEEEEe-cCHHHHHHHHHHHhcCCCCCEEEEEEEECCh--h---hhc---cccCCCCccccHHHHHhcccCCCCCH
Confidence 3579999999 6999999999999876 799999999642 1 111 122 55556777777652
Q ss_pred ------ccccCCccEEEEccCchhHHHHHHHHHHcCCcEEE--eCC-CCCHHHHHHHHHHhhhcCeE
Q 031216 101 ------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVV--YVP-HIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 101 ------~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVi--gtt-g~~~e~~~~L~~~A~~~~Vv 158 (163)
+.....+|+|+|+|....+.+....|+++|||||+ .++ ..+.++.++|. +|++.++.
T Consensus 73 d~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~-~A~~~gv~ 138 (358)
T 1ebf_A 73 DDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALF-SNKPTNGF 138 (358)
T ss_dssp HHHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHT-CCCTTCCC
T ss_pred HHHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHH-HHHHcCCE
Confidence 00011338999999766676666799999999999 444 56778899999 99998854
No 68
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=99.34 E-value=1.6e-12 Score=110.11 Aligned_cols=113 Identities=15% Similarity=0.152 Sum_probs=87.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcC--------CcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKAR--------GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~--------~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~ 106 (163)
++||+|+| +|.||+.+++.+.+.+ +++|++++|++.. +...+ . ...+++|+++++ +
T Consensus 3 ~irvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~--~~~~~-----~-~~~~~~d~~~ll-------~ 66 (332)
T 2ejw_A 3 ALKIALLG-GGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR--KPRAI-----P-QELLRAEPFDLL-------E 66 (332)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT--SCCSS-----C-GGGEESSCCCCT-------T
T ss_pred eeEEEEEc-CCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH--Hhhcc-----C-cccccCCHHHHh-------C
Confidence 58999999 6999999999999887 7999999997532 11111 1 124678888876 6
Q ss_pred ccEEEEccCch-hHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCCC
Q 031216 107 RAVVIDFTDAS-TVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTGSV 163 (163)
Q Consensus 107 ~DVVIDfT~p~-~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~~ 163 (163)
+|+|+++|.+. .+.++++.|+++|||||+.......++.++|.++|++..++|.+++
T Consensus 67 iDvVve~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~~~~~Ea~v 124 (332)
T 2ejw_A 67 ADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEGLIYHEASV 124 (332)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTTCEECGGGT
T ss_pred CCEEEECCCCcHHHHHHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhCCeEEEEEc
Confidence 89999999655 4578999999999999996443334788999999999887777654
No 69
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=99.34 E-value=4e-12 Score=104.32 Aligned_cols=101 Identities=15% Similarity=0.071 Sum_probs=85.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-+||+++| +|.||+.+++. . ++||+++.+ ...| ++ ++.+++|+|++++ ++|+|+++.
T Consensus 12 ~~rV~i~G-~GaIG~~v~~~---~-~leLv~v~~-~k~g----el-------gv~a~~d~d~lla------~pD~VVe~A 68 (253)
T 1j5p_A 12 HMTVLIIG-MGNIGKKLVEL---G-NFEKIYAYD-RISK----DI-------PGVVRLDEFQVPS------DVSTVVECA 68 (253)
T ss_dssp CCEEEEEC-CSHHHHHHHHH---S-CCSEEEEEC-SSCC----CC-------SSSEECSSCCCCT------TCCEEEECS
T ss_pred cceEEEEC-cCHHHHHHHhc---C-CcEEEEEEe-cccc----cc-------CceeeCCHHHHhh------CCCEEEECC
Confidence 38999999 79999999997 4 999999998 3322 21 5667899999884 899999999
Q ss_pred CchhHHHHHHHHHHcCCcEEEeCCCC--CHHHHHHHHHHhhhcCeE
Q 031216 115 DASTVYDNVKQATAFGMRSVVYVPHI--QLETVSALSAFCDKASMV 158 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigttg~--~~e~~~~L~~~A~~~~Vv 158 (163)
.++...+++...|++|+++|+..+|. +++..++|.++|++.+.-
T Consensus 69 ~~~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 69 SPEAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp CHHHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred CHHHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 99999999999999999999977763 777789999999996643
No 70
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=99.32 E-value=9.4e-12 Score=105.67 Aligned_cols=121 Identities=16% Similarity=0.209 Sum_probs=96.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHH--HHhcCCcEEEEEEecCCCC--cchhhhccCCCCCCcceeCCHHHHHhcccccC-Ccc
Q 031216 34 SNIKVIINGAVKEIGRAAVIA--VTKARGMEVAGAIDSHSVG--EDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK-ARA 108 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~--i~~~~~~eLvgvid~~~~g--~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~-~~D 108 (163)
+.+||.|.|++|++++.+++. +.+.++.++++.+++...| +++. .|.+ ..++|+|.+++++.+. . ++|
T Consensus 9 ~~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~--~G~~-~~Gvpvy~sv~ea~~~----~p~~D 81 (334)
T 3mwd_B 9 RHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFY--WGHK-EILIPVFKNMADAMRK----HPEVD 81 (334)
T ss_dssp TTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEE--ETTE-EEEEEEESSHHHHHHH----CTTCC
T ss_pred CCCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCccceEe--ccCc-cCCceeeCCHHHHhhc----CCCCc
Confidence 458999999999999888777 6677999999999976543 4432 2332 4589999999998863 3 589
Q ss_pred EEEEccCchhHHHHHHHHHH-cCCcEEEe-CCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 109 VVIDFTDASTVYDNVKQATA-FGMRSVVY-VPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 109 VVIDfT~p~~~~~~~~~al~-~G~~vVig-ttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
++|+|++|..+.+.+..++. +|++.|+. |+|++.++..+|.++|++.++..-|
T Consensus 82 laVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~rliG 136 (334)
T 3mwd_B 82 VLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIG 136 (334)
T ss_dssp EEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred EEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 99999999988877766666 99987766 7799998889999999998876544
No 71
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.29 E-value=1.3e-11 Score=104.13 Aligned_cols=96 Identities=21% Similarity=0.247 Sum_probs=74.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc---cCC------------CCCCcceeCCHHHHHh
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---DME------------QPLEIPVMSDLTMVLG 99 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~---g~~------------~~~gi~v~~~l~ell~ 99 (163)
|+||||+|+ |+||+.+++.+.++|+++|+++.|+.. +.+..++ |.+ ...++.++.++++++.
T Consensus 2 ~irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~~~--~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~ 78 (334)
T 2czc_A 2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKP--DFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE 78 (334)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSC--SHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT
T ss_pred CcEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcCCH--HHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhcc
Confidence 689999995 999999999999999999999999642 2222221 100 0012356789999884
Q ss_pred cccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCCC
Q 031216 100 SISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (163)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg 139 (163)
++|+|+++|.+..+.+++..++++|++|++.++.
T Consensus 79 ------~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~sap~ 112 (334)
T 2czc_A 79 ------KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGE 112 (334)
T ss_dssp ------TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTS
T ss_pred ------CCCEEEECCCccccHHHHHHHHHcCCceEeeccc
Confidence 8999998887788899999999999999997764
No 72
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.19 E-value=6.3e-11 Score=99.34 Aligned_cols=98 Identities=20% Similarity=0.252 Sum_probs=76.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHh-cCCcEEEEEEecCCC--CcchhhhccCCCCCCcc-eeCCHHHHHhcccccCCccE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTK-ARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAV 109 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~-~~~~eLvgvid~~~~--g~~~~~l~g~~~~~gi~-v~~~l~ell~~~~~~~~~DV 109 (163)
+++||+|+| +|.||+.+++.+.+ ++++++++++|+... +.+..+ ..+++ .+++++++++.- ...++|+
T Consensus 3 ~~irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~------~~g~~~~~~~~e~ll~~~-~~~~iDv 74 (312)
T 1nvm_B 3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ------RMGVTTTYAGVEGLIKLP-EFADIDF 74 (312)
T ss_dssp SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH------HTTCCEESSHHHHHHHSG-GGGGEEE
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH------HcCCCcccCCHHHHHhcc-CCCCCcE
Confidence 469999999 69999999999976 899999999996532 233332 23444 356788887510 0036899
Q ss_pred EEEccCchhHHHHHHHHHHc--CCcEEEeCCC
Q 031216 110 VIDFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (163)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~--G~~vVigttg 139 (163)
|+++|.++.+.+++..++++ |+||++.++.
T Consensus 75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~ekp~ 106 (312)
T 1nvm_B 75 VFDATSASAHVQNEALLRQAKPGIRLIDLTPA 106 (312)
T ss_dssp EEECSCHHHHHHHHHHHHHHCTTCEEEECSTT
T ss_pred EEECCChHHHHHHHHHHHHhCCCCEEEEcCcc
Confidence 99999888899999999999 9999999884
No 73
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=99.15 E-value=1.9e-10 Score=97.39 Aligned_cols=93 Identities=16% Similarity=0.220 Sum_probs=69.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccC---C-----------CCCCcceeCCHHHHHhc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM---E-----------QPLEIPVMSDLTMVLGS 100 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~---~-----------~~~gi~v~~~l~ell~~ 100 (163)
|+||||+|+ |+||+.+++.+.++|+++|+++.|+... ....++.. + ...++++++++++++.
T Consensus 1 ~ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~~--~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~- 76 (340)
T 1b7g_O 1 MVNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPN--YEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK- 76 (340)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCS--HHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH-
T ss_pred CeEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCChH--HHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhc-
Confidence 589999997 9999999999999999999999996421 11111100 0 0223344445556553
Q ss_pred ccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEe
Q 031216 101 ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVY 136 (163)
Q Consensus 101 ~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVig 136 (163)
++|+|+++|.+....+++..++++|+++|.-
T Consensus 77 -----~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~ 107 (340)
T 1b7g_O 77 -----TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQ 107 (340)
T ss_dssp -----HCSEEEECCSTTHHHHHHHHHHHTTCEEEEC
T ss_pred -----CCCEEEECCCCchhHHHHHHHHHcCCeEEEe
Confidence 7999999998888899999999999998873
No 74
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=99.15 E-value=5.6e-10 Score=93.39 Aligned_cols=112 Identities=12% Similarity=0.117 Sum_probs=91.3
Q ss_pred eeEEEE-cCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 36 IKVIIN-GAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 36 irV~Vv-Ga~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-+++|+ |++|++|+.+++.+.+ .++++++.+++...|. + -.|+++|.+++++.++ .++|+++.|+
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~-~G~~~v~~VnP~~~g~---~------i~G~~vy~sl~el~~~----~~vD~avI~v 79 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALE-YGTNLVGGTTPGKGGK---T------HLGLPVFNTVKEAKEQ----TGATASVIYV 79 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-HTCEEEEEECTTCTTC---E------ETTEEEESSHHHHHHH----HCCCEEEECC
T ss_pred CcEEEEECCCCCHHHHHHHHHHH-CCCcEEEEeCCCcCcc---e------ECCeeeechHHHhhhc----CCCCEEEEec
Confidence 446777 9999999999998875 5788877777643332 1 2478999999998853 4899999999
Q ss_pred CchhHHHHHHHHHHcCCcE-EEeCCCCCHHHHHHHHHHhhhc-CeEEcC
Q 031216 115 DASTVYDNVKQATAFGMRS-VVYVPHIQLETVSALSAFCDKA-SMVSTG 161 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~v-Vigttg~~~e~~~~L~~~A~~~-~Vv~tg 161 (163)
+|+.+.+.++.|++.|++. |+-++|++.++..+|.++|++. ++..-|
T Consensus 80 P~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~liG 128 (305)
T 2fp4_A 80 PPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIG 128 (305)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEEe
Confidence 9999999999999999988 6778899887778999999998 876654
No 75
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=99.12 E-value=1.8e-10 Score=98.37 Aligned_cols=116 Identities=13% Similarity=0.114 Sum_probs=93.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHH---Hhc-CCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAV---TKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i---~~~-~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
.-|++|+| .|.||+..++.+ .+. +..++||++ +...|+|++++++.. +.++++++|++++++ ..+|++
T Consensus 22 ~~~~vi~~-~g~~g~~~aKta~gllr~~~~~~iVgvi-~~~~Gkd~ge~~~g~-~~gipv~~d~~~al~-----~~~d~l 93 (350)
T 2g0t_A 22 GTPAAIVA-WGQLGTAHAKTTYGLLRHSRLFKPVCVV-AEHEGKMASDFVKPV-RYDVPVVSSVEKAKE-----MGAEVL 93 (350)
T ss_dssp TEEEEEEC-TTTTTSGGGHHHHHHHHHCSSEEEEEEE-SSCTTCBGGGTCC-C-CSCCBEESSHHHHHH-----TTCCEE
T ss_pred CCCEEEEe-CCCCChHHHHHHHHHHhhCCCCeEEEEe-ecCCCCcHHHhhCCC-CCCceeeCCHHHHHh-----cCCCEE
Confidence 45899999 799998888854 566 779999999 888999999998432 579999999999997 479999
Q ss_pred EEcc------CchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 111 IDFT------DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 111 IDfT------~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+..+ .|+.+.+.++.|+++|++||+|-..+ ..+.++|.++|++.++-+
T Consensus 94 vig~a~~gg~l~~~~~~~I~~Al~~G~nVvsglh~~-l~~~pel~~~A~~~Gv~i 147 (350)
T 2g0t_A 94 IIGVSNPGGYLEEQIATLVKKALSLGMDVISGLHFK-ISQQTEFLKIAHENGTRI 147 (350)
T ss_dssp EECCCSCCHHHHHHHHHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHHTCCE
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHcCCcEEeCChhh-hhCCHHHHHHHHHCCCEE
Confidence 9764 34566789999999999999988765 445577999999877644
No 76
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=99.11 E-value=1.1e-10 Score=98.91 Aligned_cols=96 Identities=20% Similarity=0.203 Sum_probs=72.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccC---------C------CCCCcceeCCHHHHHh
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM---------E------QPLEIPVMSDLTMVLG 99 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~---------~------~~~gi~v~~~l~ell~ 99 (163)
|+||+|+|+ |+||+.+++.+.++|+++|+++.|.... ....+++. . ...++.+..++++++.
T Consensus 1 mikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d~~~~--~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~ 77 (337)
T 1cf2_P 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPD--FEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD 77 (337)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSSSEEEEEEEESSCS--HHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH
T ss_pred CeEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEcCChh--HHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhc
Confidence 689999997 9999999999999999999999985421 11111110 0 0123344456777774
Q ss_pred cccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCCC
Q 031216 100 SISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (163)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg 139 (163)
++|+|+++|.+..+.+++..++++|++||..++.
T Consensus 78 ------~vDvV~~atp~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 78 ------EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp ------TCSEEEECCSTTHHHHHHHHHHHHTCCEEECTTS
T ss_pred ------CCCEEEECCCchhhHHHHHHHHHcCCEEEEecCC
Confidence 8999999988888899999999999999987765
No 77
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=99.07 E-value=2.2e-10 Score=97.84 Aligned_cols=113 Identities=13% Similarity=0.105 Sum_probs=95.2
Q ss_pred eeEEEEcCCCHHHHHHHHHH---HhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAV---TKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i---~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
-|++|++ .|.+|+..++.+ .+.++.++||++|++..|+|+++++|. +.++|++.|++++++ .++|++|.
T Consensus 8 ~~~vi~~-~g~~~~~~aKta~gl~r~~~~~iVgvid~~~~G~d~ge~~g~--~~gipi~~~l~~al~-----~~~d~lvi 79 (349)
T 2obn_A 8 QRVAILL-HEGTTGTIGKTGLALLRYSEAPIVAVIDRNCAGQSLREITGI--YRYVPIVKSVEAALE-----YKPQVLVI 79 (349)
T ss_dssp CCEEEEC-TTTSSSSSCHHHHHHHHHCCSCEEEEECGGGTTSCHHHHHCC--CSCCCEESSHHHHGG-----GCCSEEEE
T ss_pred CcEEEEe-CCCCCcHHHHHhHHhhhcCCCcEEEEEeCCCCCCcHHHhcCC--cCCCCccCCHHHHHh-----CCCCEEEE
Confidence 4689998 799998877776 778889999999988999999999996 689999999999997 58999987
Q ss_pred cc------CchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 113 FT------DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 113 fT------~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
-+ .|+.+.+.+..|+++|++||.|-..+- .+.++|.++|++ ++-
T Consensus 80 g~a~~gG~l~~~~~~~i~~Al~~G~~Vvsglh~~l-~~~pel~~~A~~-g~~ 129 (349)
T 2obn_A 80 GIAPKGGGIPDDYWIELKTALQAGMSLVNGLHTPL-ANIPDLNALLQP-GQL 129 (349)
T ss_dssp CCCCCCC-SCGGGHHHHHHHHHTTCEEEECSSSCC-TTCHHHHHHCCT-TCC
T ss_pred EecCCCCCCCHHHHHHHHHHHHcCCcEEeCccchh-hCCHHHHHHHHc-CCE
Confidence 65 467788999999999999999877432 223559999998 764
No 78
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.05 E-value=1.1e-09 Score=92.91 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=75.1
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhccCCCC-CCcceeC--CHHHHHhcccccCC
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCDMEQP-LEIPVMS--DLTMVLGSISQSKA 106 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~---~~g~~~~~l~g~~~~-~gi~v~~--~l~ell~~~~~~~~ 106 (163)
+.|+||+|+|++|++|+++++.+.++|+++++++..++ ..|+++.++...... .+..+.+ +.+++. .+
T Consensus 2 ~~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~------~~ 75 (337)
T 3dr3_A 2 NAMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFS------PG 75 (337)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTC------TT
T ss_pred CCceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHh------cC
Confidence 45899999999999999999999999999999998876 788887765431101 1334333 444443 38
Q ss_pred ccEEEEccCchhH-HHHHHHHHHcCCcEEEeCCCC
Q 031216 107 RAVVIDFTDASTV-YDNVKQATAFGMRSVVYVPHI 140 (163)
Q Consensus 107 ~DVVIDfT~p~~~-~~~~~~al~~G~~vVigttg~ 140 (163)
+|+|+ ++.|... .+++..+++.|+.||--+..+
T Consensus 76 ~Dvvf-~a~p~~~s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 76 VDVVF-LATAHEVSHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp CSEEE-ECSCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred CCEEE-ECCChHHHHHHHHHHHHCCCEEEEcCCcc
Confidence 99999 5555554 789999999999988755544
No 79
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=98.98 E-value=3.2e-09 Score=90.01 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=69.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhccCCC-------CCCcceeC-CHHHHHhccccc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQ-------PLEIPVMS-DLTMVLGSISQS 104 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid-~~~~g~~~~~l~g~~~-------~~gi~v~~-~l~ell~~~~~~ 104 (163)
+|+||+|+||+|++|+.+++.+.++|+++|+++.+ ++..|+...+..+... ...+.+.+ ++++ +
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~------ 75 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-H------ 75 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-G------
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-h------
Confidence 46999999999999999999999999999999984 4345655544332100 01222221 3333 3
Q ss_pred CCccEEEEccCchhHHHHHHHHHHcCCcEEEeCCC
Q 031216 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (163)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg 139 (163)
.++|+|+.++....+.+.+..++++|++||.....
T Consensus 76 ~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 76 KDVDVVLSALPNELAESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp TTCSEEEECCCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEECCcc
Confidence 28999996655566789999999999998875543
No 80
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=98.96 E-value=3.8e-09 Score=89.52 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=71.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCC-CCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP-LEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~-~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
|+||+|+||+|++|+.+++.+.++|+++|+++.++...|++..+..+.... ..+. +.++++ + .++|+|+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~~-~------~~vDvV~~a 75 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPEK-L------EPADILVLA 75 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGGG-C------CCCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchhH-h------cCCCEEEEc
Confidence 689999999999999999999999999999998866566665553321101 1222 234543 3 389999966
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCCCC
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVPHI 140 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigttg~ 140 (163)
+....+.+.+..++++|++||.-+..+
T Consensus 76 ~g~~~s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 76 LPHGVFAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp CCTTHHHHTHHHHHTTCSEEEECSSTT
T ss_pred CCcHHHHHHHHHHHHCCCEEEEcCccc
Confidence 655666899999999999988754433
No 81
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=98.91 E-value=3.3e-09 Score=91.63 Aligned_cols=122 Identities=8% Similarity=-0.007 Sum_probs=85.3
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEE-EecCCC---------Cc------c---hhhhc-cCCCCCCccee-
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGA-IDSHSV---------GE------D---IGMVC-DMEQPLEIPVM- 91 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgv-id~~~~---------g~------~---~~~l~-g~~~~~gi~v~- 91 (163)
.|+||+|+|++|.+|+.+++.+.++|+ ++++++ .++... +- | ..++- .+. ..++.++
T Consensus 3 ~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~-~~~~~v~~ 81 (388)
T 1r0k_A 3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALA-GSSVEAAA 81 (388)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTT-TCSSEEEE
T ss_pred CceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhc-cCCcEEEe
Confidence 369999999889999999999999998 999988 443210 00 0 00000 000 1112222
Q ss_pred --CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 92 --SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 92 --~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
+++++++. .+ +|+|++.+.-....+.+..|+++||||++..-+......+.|.++|+++|+.+.+
T Consensus 82 g~~~~~el~~----~~-iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANKE~lv~~G~~l~~~A~~~gv~liP 148 (388)
T 1r0k_A 82 GADALVEAAM----MG-ADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLP 148 (388)
T ss_dssp SHHHHHHHHT----SC-CSEEEECCCSGGGHHHHHHHHHTTSEEEECCSHHHHTTHHHHHHHHHHHTCEEEE
T ss_pred CccHHHHHHc----CC-CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCcHHHHhhHHHHHHHHHHcCCEEEE
Confidence 33345554 25 9999998866667889999999999999986666667788999999998887643
No 82
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.89 E-value=9.8e-10 Score=92.85 Aligned_cols=112 Identities=23% Similarity=0.272 Sum_probs=73.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCC--CCcceeCCHHHHHhcccccCCccEEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP--LEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~--~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
+|||+|+|| |++|+.+++.+.+..++.+ +|+.. .++..+...... .++.-.+++++++ .+.|+||.
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~~~~v~~---~~~~~--~~~~~~~~~~~~~~~d~~d~~~l~~~~------~~~DvVi~ 83 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKDEFDVYI---GDVNN--ENLEKVKEFATPLKVDASNFDKLVEVM------KEFELVIG 83 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTTSEEEE---EESCH--HHHHHHTTTSEEEECCTTCHHHHHHHH------TTCSEEEE
T ss_pred ccEEEEECC-CHHHHHHHHHHhcCCCeEE---EEcCH--HHHHHHhccCCcEEEecCCHHHHHHHH------hCCCEEEE
Confidence 589999996 9999999999876554433 34321 111111110000 1111112334444 48999999
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEc
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~t 160 (163)
++.|..+...++.|+++|+|+|- .+ ++.+...+|.+.|++++++.-
T Consensus 84 ~~p~~~~~~v~~~~~~~g~~yvD-~s-~~~~~~~~l~~~a~~~g~~~i 129 (365)
T 3abi_A 84 ALPGFLGFKSIKAAIKSKVDMVD-VS-FMPENPLELRDEAEKAQVTIV 129 (365)
T ss_dssp CCCGGGHHHHHHHHHHHTCEEEE-CC-CCSSCGGGGHHHHHHTTCEEE
T ss_pred ecCCcccchHHHHHHhcCcceEe-ee-ccchhhhhhhhhhccCCceee
Confidence 88888889999999999999876 33 444456778899999887653
No 83
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.86 E-value=1.9e-08 Score=75.21 Aligned_cols=105 Identities=17% Similarity=0.144 Sum_probs=80.8
Q ss_pred CeeEEEEcCC---CHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~---G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+.+|+|+|++ |++|..+++.+.+ .++++.. +++. + .++ .|+++|.+++++.+ .+|+++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~-~G~~v~~-Vnp~--~---~~i------~G~~~y~sl~~l~~------~vDlvv 82 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLE-HGYDVYP-VNPK--Y---EEV------LGRKCYPSVLDIPD------KIEVVD 82 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHH-TTCEEEE-ECTT--C---SEE------TTEECBSSGGGCSS------CCSEEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHH-CCCEEEE-ECCC--C---CeE------CCeeccCCHHHcCC------CCCEEE
Confidence 4689999987 8999999999874 6787332 2322 2 122 36789999999753 899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
.++.++.+.+.++.|++.|++.++-.+|.. .++|.++|++.|+-+-|
T Consensus 83 i~vp~~~~~~vv~~~~~~gi~~i~~~~g~~---~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 83 LFVKPKLTMEYVEQAIKKGAKVVWFQYNTY---NREASKKADEAGLIIVA 129 (144)
T ss_dssp ECSCHHHHHHHHHHHHHHTCSEEEECTTCC---CHHHHHHHHHTTCEEEE
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEECCCch---HHHHHHHHHHcCCEEEc
Confidence 888888889999999999999888787764 36688888888776543
No 84
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.85 E-value=2.5e-08 Score=74.19 Aligned_cols=106 Identities=14% Similarity=0.197 Sum_probs=79.2
Q ss_pred CCeeEEEEcCC---CHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 34 SNIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 34 ~~irV~VvGa~---G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
.+.+|+|+|++ |+||+.+++.+.+ .++++. .+++. +. + -.|.++|.|++++.+ .+|++
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~-~G~~V~-~vnp~--~~---~------i~G~~~~~s~~el~~------~vDlv 73 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLS-KGFEVL-PVNPN--YD---E------IEGLKCYRSVRELPK------DVDVI 73 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHH-TTCEEE-EECTT--CS---E------ETTEECBSSGGGSCT------TCCEE
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHH-CCCEEE-EeCCC--CC---e------ECCeeecCCHHHhCC------CCCEE
Confidence 45789999954 9999999999875 688833 34432 11 1 136788999998764 89999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
+-+..++.+.+.+..+++.|++.++-.++.. .++|.++|++.|+-+-|
T Consensus 74 ii~vp~~~v~~v~~~~~~~g~~~i~~~~~~~---~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 74 VFVVPPKVGLQVAKEAVEAGFKKLWFQPGAE---SEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCEEEECTTSC---CHHHHHHHHHHTCEEEC
T ss_pred EEEeCHHHHHHHHHHHHHcCCCEEEEcCccH---HHHHHHHHHHCCCEEEc
Confidence 9888887788999999999988777666432 46688888888876654
No 85
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=98.82 E-value=2.1e-08 Score=85.01 Aligned_cols=98 Identities=16% Similarity=0.097 Sum_probs=69.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhccCCC-------CCCccee-CCHHHHHhcccccC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQ-------PLEIPVM-SDLTMVLGSISQSK 105 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid-~~~~g~~~~~l~g~~~-------~~gi~v~-~~l~ell~~~~~~~ 105 (163)
|+||+|+||+|++|+.+++.+.++|+++|+++.+ +...|+...+..+... ...+.+. .+++++++ .
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 82 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEF-----E 82 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGG-----T
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhc-----C
Confidence 4899999999999999999999999999999985 4445666554432110 0111121 24444332 2
Q ss_pred CccEEEEccCchhHHHHHHHHHHcCCcEEEeC
Q 031216 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~G~~vVigt 137 (163)
++|+|+.++....+.+.+..+++.|++||--.
T Consensus 83 ~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s 114 (354)
T 1ys4_A 83 DVDIVFSALPSDLAKKFEPEFAKEGKLIFSNA 114 (354)
T ss_dssp TCCEEEECCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCCEEEECC
Confidence 79999966655666889999999999977543
No 86
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.78 E-value=2.2e-08 Score=74.97 Aligned_cols=107 Identities=12% Similarity=0.138 Sum_probs=77.9
Q ss_pred CeeEEEEcCC---CHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~---G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+.+|+|+|++ |+||..+++.+.+ .+++ +..+++...|.. -.|+++|.|++++. ..+|+++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~-~G~~-v~~vnp~~~g~~---------i~G~~~~~sl~el~------~~~Dlvi 75 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLD-QGYH-VIPVSPKVAGKT---------LLGQQGYATLADVP------EKVDMVD 75 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHH-HTCC-EEEECSSSTTSE---------ETTEECCSSTTTCS------SCCSEEE
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHH-CCCE-EEEeCCcccccc---------cCCeeccCCHHHcC------CCCCEEE
Confidence 4679999976 8999999999874 4677 334454332221 23778899998875 3899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
.+++++.+.+.+..+++.|+..|+-.++.. .++|.++|++.|+-+-|
T Consensus 76 i~vp~~~v~~v~~~~~~~g~~~i~i~~~~~---~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 76 VFRNSEAAWGVAQEAIAIGAKTLWLQLGVI---NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp CCSCSTHHHHHHHHHHHHTCCEEECCTTCC---CHHHHHHHHTTTCEEEC
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEEcCChH---HHHHHHHHHHcCCEEEc
Confidence 788877778889899999966554444332 46788889999887765
No 87
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=98.78 E-value=2e-08 Score=80.02 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=65.9
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce--eCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v--~~~l~ell~~~~~~~~~DVVI 111 (163)
...||+|+|+ |.+|+.+++.+....+++++|++|.+.. ..+... .++++ ++++++++. + ++|+|+
T Consensus 79 ~~~rV~IIGa-G~~G~~la~~~~~~~g~~iVg~~D~dp~--k~g~~i-----~gv~V~~~~dl~ell~----~-~ID~Vi 145 (211)
T 2dt5_A 79 RKWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPE--KVGRPV-----RGGVIEHVDLLPQRVP----G-RIEIAL 145 (211)
T ss_dssp SCEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTT--TTTCEE-----TTEEEEEGGGHHHHST----T-TCCEEE
T ss_pred CCCEEEEECc-cHHHHHHHHhHhhcCCcEEEEEEeCCHH--HHhhhh-----cCCeeecHHhHHHHHH----c-CCCEEE
Confidence 3489999995 9999999996322238999999995431 112211 23444 578888876 3 899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEE-EeCC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSV-VYVP 138 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vV-igtt 138 (163)
.+++...+.+.+..++++|++.| ..+|
T Consensus 146 IA~Ps~~~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 146 LTVPREAAQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred EeCCchhHHHHHHHHHHcCCCEEEECCc
Confidence 66666666789999999999944 5566
No 88
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=98.77 E-value=1.1e-08 Score=86.62 Aligned_cols=99 Identities=17% Similarity=0.210 Sum_probs=68.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-CCCCcchhhh------ccCCC--------C-------CCcceeC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMV------CDMEQ--------P-------LEIPVMS 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-~~~g~~~~~l------~g~~~--------~-------~gi~v~~ 92 (163)
|+||+|+|+ |++|+.++|.+.++|++||+++.|+ ... ...+.+ .|... . ..+.++.
T Consensus 3 ~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d~~~~~-~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 3 KIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITT-DYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSSCH-HHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred ceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEECCCCCH-HHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 479999996 9999999999999999999999984 111 000111 11000 0 0123343
Q ss_pred --CHHHHH-hcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCCC
Q 031216 93 --DLTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (163)
Q Consensus 93 --~l~ell-~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigttg 139 (163)
|++++. .. .++|+|+++|....+.+.+..++++|++ +|+-.|+
T Consensus 81 ~~dp~~l~w~~----~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 81 IRNPDEIPWAE----AGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPS 127 (337)
T ss_dssp CSCGGGCCHHH----HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred cCChHHccccc----cCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCC
Confidence 676652 11 3899999999888889999999999984 7776664
No 89
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=98.77 E-value=1.9e-08 Score=85.77 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=69.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCC---CCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP---LEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~---~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
++||+|+||+|++|+.+++.+.++|+++++++.++...|....+..+.... .++.+ .+ ++.+ .++|+|+
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~-~~-~~~~------~~vDvVf 87 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVS-VK-DADF------STVDAVF 87 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBC-GG-GCCG------GGCSEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCccccccee-cc-hhHh------cCCCEEE
Confidence 489999999999999999999999999999998876666655544331100 11222 22 3333 2799999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCCCC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigttg~ 140 (163)
.++....+.+.+..+ ++|+++|.-+..+
T Consensus 88 ~atp~~~s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 88 CCLPHGTTQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp ECCCTTTHHHHHHTS-CTTCEEEECSSTT
T ss_pred EcCCchhHHHHHHHH-hCCCEEEECCccc
Confidence 666556678999999 9999887654433
No 90
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=98.74 E-value=2.7e-08 Score=84.98 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=70.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCC----C---CCccee-CCHHHHHhcccccC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ----P---LEIPVM-SDLTMVLGSISQSK 105 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~----~---~gi~v~-~~l~ell~~~~~~~ 105 (163)
+++||+|+||+|+.|+++++.+.++|.++|+.+.+++..|++..+...... + .+..+. .+.++ + .
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~------~ 78 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M------D 78 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C------T
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH-h------c
Confidence 468999999999999999999999999999999887778888776532100 0 012222 12222 2 3
Q ss_pred CccEEEEccCchhHHHHHHHHHHcCCcEEEeC
Q 031216 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~G~~vVigt 137 (163)
++|+|+.++......+++..+++.|+.+|.=+
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlS 110 (359)
T 4dpk_A 79 DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNS 110 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHHHTTCEEEECS
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCCEEEEcC
Confidence 89999955545555789999999999988533
No 91
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=98.74 E-value=2.7e-08 Score=84.98 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=70.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCC----C---CCccee-CCHHHHHhcccccC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ----P---LEIPVM-SDLTMVLGSISQSK 105 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~----~---~gi~v~-~~l~ell~~~~~~~ 105 (163)
+++||+|+||+|+.|+++++.+.++|.++|+.+.+++..|++..+...... + .+..+. .+.++ + .
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~------~ 78 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M------D 78 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C------T
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH-h------c
Confidence 468999999999999999999999999999999887778888776532100 0 012222 12222 2 3
Q ss_pred CccEEEEccCchhHHHHHHHHHHcCCcEEEeC
Q 031216 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~G~~vVigt 137 (163)
++|+|+.++......+++..+++.|+.+|.=+
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlS 110 (359)
T 4dpl_A 79 DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNS 110 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHHHTTCEEEECS
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCCEEEEcC
Confidence 89999955545555789999999999988533
No 92
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=98.72 E-value=4e-08 Score=83.85 Aligned_cols=96 Identities=15% Similarity=0.074 Sum_probs=70.8
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee-CCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-SDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~-~~l~ell~~~~~~~~~DVVID 112 (163)
-|+||+|+||+|+.|+++++.+.++|.+||+.+.+++..|+.+.++.+.. ..+..+. .+.++++. ++|+|+
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~-~~~l~~~~~~~~~~~~------~~Dvvf- 83 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPST-LENSILSEFDPEKVSK------NCDVLF- 83 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGG-CCCCBCBCCCHHHHHH------HCSEEE-
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhh-ccCceEEeCCHHHhhc------CCCEEE-
Confidence 58999999999999999999999999999999888777888888654321 1233332 24455433 799999
Q ss_pred ccCchhH-HHHHHHHHHcCCcEEEeCCC
Q 031216 113 FTDASTV-YDNVKQATAFGMRSVVYVPH 139 (163)
Q Consensus 113 fT~p~~~-~~~~~~al~~G~~vVigttg 139 (163)
|+.|... .+++..+ .|+.||--...
T Consensus 84 ~alp~~~s~~~~~~~--~g~~VIDlSsd 109 (351)
T 1vkn_A 84 TALPAGASYDLVREL--KGVKIIDLGAD 109 (351)
T ss_dssp ECCSTTHHHHHHTTC--CSCEEEESSST
T ss_pred ECCCcHHHHHHHHHh--CCCEEEECChh
Confidence 6667655 5677666 89987764443
No 93
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=98.71 E-value=1.7e-08 Score=85.68 Aligned_cols=96 Identities=20% Similarity=0.226 Sum_probs=65.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc--------cC---------CCCCCcceeCCHHHH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--------DM---------EQPLEIPVMSDLTMV 97 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~--------g~---------~~~~gi~v~~~l~el 97 (163)
|+||||+|+ |++|+.+++.+.++++++|+++.|... .. ...++ |. ....++.+..+.+++
T Consensus 2 mikVgI~G~-G~IGr~v~r~l~~~~~~evvaV~d~~~-~~-~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~ 78 (343)
T 2yyy_A 2 PAKVLINGY-GSIGKRVADAVSMQDDMEVIGVTKTKP-DF-EARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDI 78 (343)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEEESSC-SH-HHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGT
T ss_pred ceEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCH-HH-HHHHHHhcCCccccccCCCceeecccCCeEEECCchHHh
Confidence 689999996 999999999999999999999998531 11 11000 00 001122333345555
Q ss_pred HhcccccCCccEEEEccCchhHHHHHH-HHHHcCCcEEEeCCC
Q 031216 98 LGSISQSKARAVVIDFTDASTVYDNVK-QATAFGMRSVVYVPH 139 (163)
Q Consensus 98 l~~~~~~~~~DVVIDfT~p~~~~~~~~-~al~~G~~vVigttg 139 (163)
+. ++|+|+++|......+++. .++++|++||+..+.
T Consensus 79 ~~------~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 79 IE------DADIVVDGAPKKIGKQNLENIYKPHKVKAILQGGE 115 (343)
T ss_dssp GG------GCSEEEECCCTTHHHHHHHHTTTTTTCEEEECTTS
T ss_pred cc------CCCEEEECCCccccHHHHHHHHHHCCCEEEECCCc
Confidence 43 7999997765555588885 999999998885543
No 94
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=98.70 E-value=5.5e-08 Score=90.90 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=93.7
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHh-----cCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCc
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTK-----ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR 107 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~-----~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~ 107 (163)
.+..||.|.|++|+ .+.+++.. .++.++|+.+++...|.+...+.|.. ..|+|+|.+++++.+. ..++
T Consensus 494 ~~~trviV~G~tg~---~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~~-~~Gvp~y~sv~ea~~~---~p~~ 566 (829)
T 3pff_A 494 SRHTKAIVWGMQTR---AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHK-EILIPVFKNMADAMRK---HPEV 566 (829)
T ss_dssp CTTCCEEEESCCHH---HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTE-EEEEEEESSHHHHHHH---CTTC
T ss_pred cCCCeEEEECCcHH---HHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecCC-cCCcccCCcHHHHhhc---cCCC
Confidence 34589999999877 44455443 37899999999866554444334442 5689999999998862 0158
Q ss_pred cEEEEccCchhHHHHHHHHHH-cCCcEE-EeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 108 AVVIDFTDASTVYDNVKQATA-FGMRSV-VYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 108 DVVIDfT~p~~~~~~~~~al~-~G~~vV-igttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
|++|.|.+|..+.+.+..|++ .|++.+ +=|.|+...+..+|.++|++.++..-|
T Consensus 567 DlaVI~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~rliG 622 (829)
T 3pff_A 567 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIG 622 (829)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred cEEEEeCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 999999999999999999999 998855 446699988888999999998876544
No 95
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.69 E-value=5.2e-08 Score=77.84 Aligned_cols=90 Identities=23% Similarity=0.325 Sum_probs=60.3
Q ss_pred CeeEEEEcCCCHHHHHHHHH-HHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce--eCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIA-VTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~-i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v--~~~l~ell~~~~~~~~~DVVI 111 (163)
..||+|+|+ |++|+.+++. ....++++++|++|.+.. ..+... .++++ ++++++++. .. |+++
T Consensus 85 ~~rV~IIGA-G~~G~~La~~~~~~~~g~~iVg~~D~dp~--k~g~~i-----~gv~V~~~~dl~eli~-----~~-D~Vi 150 (215)
T 2vt3_A 85 MTDVILIGV-GNLGTAFLHYNFTKNNNTKISMAFDINES--KIGTEV-----GGVPVYNLDDLEQHVK-----DE-SVAI 150 (215)
T ss_dssp --CEEEECC-SHHHHHHHHCC------CCEEEEEESCTT--TTTCEE-----TTEEEEEGGGHHHHCS-----SC-CEEE
T ss_pred CCEEEEEcc-CHHHHHHHHHHhcccCCcEEEEEEeCCHH--HHHhHh-----cCCeeechhhHHHHHH-----hC-CEEE
Confidence 478999995 9999999995 345779999999996431 122221 23343 578888886 24 9988
Q ss_pred EccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 112 DFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
.+++...+.+.+..+++.|++ ++..+|
T Consensus 151 IAvPs~~~~ei~~~l~~aGi~~Ilnf~P 178 (215)
T 2vt3_A 151 LTVPAVAAQSITDRLVALGIKGILNFTP 178 (215)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EecCchhHHHHHHHHHHcCCCEEEEcCc
Confidence 555555667899999999999 666666
No 96
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.69 E-value=5.3e-08 Score=72.54 Aligned_cols=107 Identities=13% Similarity=0.108 Sum_probs=79.9
Q ss_pred CeeEEEEcCC---CHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~---G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+.+|+|+|++ |+||+.+++.+. ..++++ .-+++...+. + -.|+++|.+++++- ..+|+++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~-~~G~~v-~~vnp~~~~~---~------i~G~~~~~sl~el~------~~vDlav 75 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLR-EQGYRV-LPVNPRFQGE---E------LFGEEAVASLLDLK------EPVDILD 75 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHH-HTTCEE-EEECGGGTTS---E------ETTEECBSSGGGCC------SCCSEEE
T ss_pred CCEEEEECCCCCCCChHHHHHHHHH-HCCCEE-EEeCCCcccC---c------CCCEEecCCHHHCC------CCCCEEE
Confidence 4679999987 899999999987 567873 2334321121 2 13788999999875 3899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
.+..++.+.+.++.+.+.|+..++-.+++.. +++.++|++.|+-+-|
T Consensus 76 i~vp~~~~~~v~~~~~~~gi~~i~~~~g~~~---~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 76 VFRPPSALMDHLPEVLALRPGLVWLQSGIRH---PEFEKALKEAGIPVVA 122 (140)
T ss_dssp ECSCHHHHTTTHHHHHHHCCSCEEECTTCCC---HHHHHHHHHTTCCEEE
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEEcCCcCH---HHHHHHHHHcCCEEEc
Confidence 8888888889999999999887776777652 6688888888765544
No 97
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=98.68 E-value=2.9e-08 Score=83.93 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=67.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-CCCCcchhhh------ccCC-------------CCCCccee--C
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMV------CDME-------------QPLEIPVM--S 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-~~~g~~~~~l------~g~~-------------~~~gi~v~--~ 92 (163)
|+||||+|+ |++|+.++|.+.++|+++|+++.|+ ...+ ....+ .|.. ....+.++ .
T Consensus 3 ~ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d~~~~~~-~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1u8f_O 3 KVKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLN-YMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQER 80 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHH-HHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred ceEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecCCCCCHH-HHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecC
Confidence 589999995 9999999999999999999999984 2111 10000 0000 00122334 3
Q ss_pred CHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcC-CcEEEeCC
Q 031216 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFG-MRSVVYVP 138 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G-~~vVigtt 138 (163)
|++++... +.++|+|+++|....+.+.+..++++| +.|++..+
T Consensus 81 d~~~l~~~---~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 81 DPSKIKWG---DAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp SGGGCCTT---TTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred CHHHCccc---cCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccC
Confidence 66665210 148999998887778899999999999 66666554
No 98
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=98.66 E-value=6.7e-08 Score=81.59 Aligned_cols=93 Identities=12% Similarity=0.035 Sum_probs=67.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~--~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+|+||+|+||+|++|+.+++.+.++ |+++++++.+++..|+... +. ...+.+ .+++.... .++|+|+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~----~~~i~~-~~~~~~~~-----~~vDvVf 70 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FN----GKTVRV-QNVEEFDW-----SQVHIAL 70 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ET----TEEEEE-EEGGGCCG-----GGCSEEE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ec----CceeEE-ecCChHHh-----cCCCEEE
Confidence 4799999999999999999999988 8999999987655555432 11 112333 23332111 3799999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigt 137 (163)
+++......+++..+++.|+.+|.-+
T Consensus 71 ~a~g~~~s~~~a~~~~~~G~~vId~s 96 (336)
T 2r00_A 71 FSAGGELSAKWAPIAAEAGVVVIDNT 96 (336)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECS
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEcC
Confidence 66655667899999999999877644
No 99
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=98.65 E-value=8.4e-08 Score=82.59 Aligned_cols=97 Identities=20% Similarity=0.145 Sum_probs=68.9
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhccCCCC-------CCcceeCCHHH--HHhcccc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQP-------LEIPVMSDLTM--VLGSISQ 103 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid-~~~~g~~~~~l~g~~~~-------~gi~v~~~l~e--ll~~~~~ 103 (163)
+|+||+|+||+|..|+++++.+.++|.++|+.+.. ++..|+.+.+....... .+..+ .++++ .+
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v-~~~~~~~~~----- 91 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVV-QECKPEGNF----- 91 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBC-EESSSCTTG-----
T ss_pred CccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceE-EeCchhhhc-----
Confidence 46899999999999999999999999999998864 55788887655321100 01122 22221 23
Q ss_pred cCCccEEEEccCchh-HHHHHHHHHHcCCcEEEeCC
Q 031216 104 SKARAVVIDFTDAST-VYDNVKQATAFGMRSVVYVP 138 (163)
Q Consensus 104 ~~~~DVVIDfT~p~~-~~~~~~~al~~G~~vVigtt 138 (163)
.++|+|+ ++.|.. ..+++..+++.|+.||--+.
T Consensus 92 -~~~Dvvf-~alp~~~s~~~~~~~~~~G~~VIDlSa 125 (381)
T 3hsk_A 92 -LECDVVF-SGLDADVAGDIEKSFVEAGLAVVSNAK 125 (381)
T ss_dssp -GGCSEEE-ECCCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred -ccCCEEE-ECCChhHHHHHHHHHHhCCCEEEEcCC
Confidence 3799999 555555 57899999999999886444
No 100
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.62 E-value=6.4e-07 Score=62.11 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=69.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce----e---CCHHHHHhcccccCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----M---SDLTMVLGSISQSKA 106 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v----~---~~l~ell~~~~~~~~ 106 (163)
.++||+|+|+ |.||+.+++.+.+....+++ ++++.. .....+. ..++.. . +++++++ .+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~-~~~r~~--~~~~~~~----~~~~~~~~~d~~~~~~~~~~~------~~ 69 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVT-VADHDL--AALAVLN----RMGVATKQVDAKDEAGLAKAL------GG 69 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEE-EEESCH--HHHHHHH----TTTCEEEECCTTCHHHHHHHT------TT
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEE-EEeCCH--HHHHHHH----hCCCcEEEecCCCHHHHHHHH------cC
Confidence 4679999997 99999999999865437766 456432 1122221 112111 1 2334444 38
Q ss_pred ccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhc
Q 031216 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~ 155 (163)
+|+||+++.+......+..+.+.|++.+.-+ -+.+..+++.+++++.
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~a 116 (118)
T 3ic5_A 70 FDAVISAAPFFLTPIIAKAAKAAGAHYFDLT--EDVAATNAVRALVEDS 116 (118)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEECCC--SCHHHHHHHHHHHHCC
T ss_pred CCEEEECCCchhhHHHHHHHHHhCCCEEEec--CcHHHHHHHHHHHHhh
Confidence 9999998877777889999999999987633 2344566677766653
No 101
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=98.58 E-value=2.2e-07 Score=79.05 Aligned_cols=98 Identities=14% Similarity=0.060 Sum_probs=67.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcC-----CcEEEEEEecCCCCcchhhhccCCCC-CCcceeC-CHHHHHhcccccCCc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKAR-----GMEVAGAIDSHSVGEDIGMVCDMEQP-LEIPVMS-DLTMVLGSISQSKAR 107 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~-----~~eLvgvid~~~~g~~~~~l~g~~~~-~gi~v~~-~l~ell~~~~~~~~~ 107 (163)
|+||+|+||+|++|+.+++.+.+++ .++++.+.+++..|+...+..+.... ..+.+.+ +. +.+ .++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~------~~~ 81 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVL------GGH 81 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHH------TTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHh------cCC
Confidence 6899999999999999999999999 89999988766566655543221000 1222221 32 234 389
Q ss_pred cEEEEccCchhHHHHHHHHHHcCCcEEEeCCCC
Q 031216 108 AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (163)
Q Consensus 108 DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~ 140 (163)
|+|+.++......+.+..+ +.|+.+|.-+..+
T Consensus 82 DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 82 DAVFLALPHGHSAVLAQQL-SPETLIIDCGADF 113 (352)
T ss_dssp SEEEECCTTSCCHHHHHHS-CTTSEEEECSSTT
T ss_pred CEEEECCCCcchHHHHHHH-hCCCEEEEECCCc
Confidence 9999555445567888888 9999887655443
No 102
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.54 E-value=7.6e-08 Score=81.96 Aligned_cols=112 Identities=21% Similarity=0.236 Sum_probs=75.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCC--CCCcceeCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ--PLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~--~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+..||+|+| +|+||+.+++.+.+. .++ .++|++. .++.++..... ..++.-++++++++. ++|+||
T Consensus 15 ~~~~v~IiG-aG~iG~~ia~~L~~~--~~V-~V~~R~~--~~a~~la~~~~~~~~d~~~~~~l~~ll~------~~DvVI 82 (365)
T 2z2v_A 15 RHMKVLILG-AGNIGRAIAWDLKDE--FDV-YIGDVNN--ENLEKVKEFATPLKVDASNFDKLVEVMK------EFELVI 82 (365)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTT--SEE-EEEESCH--HHHHHHTTTSEEEECCTTCHHHHHHHHT------TCSCEE
T ss_pred CCCeEEEEc-CCHHHHHHHHHHHcC--CeE-EEEECCH--HHHHHHHhhCCeEEEecCCHHHHHHHHh------CCCEEE
Confidence 357999999 599999999999865 664 4777642 22333321100 011111245666664 899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.++++..+.+.++.|++.|+++|- ++. ..++..+|.+.|++.|+.+
T Consensus 83 n~~P~~~~~~v~~a~l~~G~~~vD-~s~-~~~~~~~l~~~Ak~aG~~~ 128 (365)
T 2z2v_A 83 GALPGFLGFKSIKAAIKSKVDMVD-VSF-MPENPLELRDEAEKAQVTI 128 (365)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEE-CCC-CSSCGGGGHHHHHHTTCEE
T ss_pred ECCChhhhHHHHHHHHHhCCeEEE-ccC-CcHHHHHHHHHHHHcCCEE
Confidence 887766677889999999999887 332 3344567888899988765
No 103
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.54 E-value=2.1e-07 Score=74.25 Aligned_cols=99 Identities=16% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+|+||+|+| +|+||+.+++.+.+. +.+ +.++|++. .....+.. ..++.+++++++++. ++|+||.+
T Consensus 2 ~~m~i~iiG-~G~mG~~~a~~l~~~-g~~-v~~~~~~~--~~~~~~~~---~~g~~~~~~~~~~~~------~~D~Vi~~ 67 (259)
T 2ahr_A 2 NAMKIGIIG-VGKMASAIIKGLKQT-PHE-LIISGSSL--ERSKEIAE---QLALPYAMSHQDLID------QVDLVILG 67 (259)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTS-SCE-EEEECSSH--HHHHHHHH---HHTCCBCSSHHHHHH------TCSEEEEC
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhC-CCe-EEEECCCH--HHHHHHHH---HcCCEeeCCHHHHHh------cCCEEEEE
Confidence 568999999 699999999998754 454 56777642 12222221 235666789999885 89999978
Q ss_pred cCchhHHHHHHHHHHcCCcEEEeCC-CCCHHHHHHH
Q 031216 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSAL 148 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigtt-g~~~e~~~~L 148 (163)
+.|..+.+.+.. ++.|+ +|+.++ +.+.++.+++
T Consensus 68 v~~~~~~~v~~~-l~~~~-~vv~~~~~~~~~~l~~~ 101 (259)
T 2ahr_A 68 IKPQLFETVLKP-LHFKQ-PIISMAAGISLQRLATF 101 (259)
T ss_dssp SCGGGHHHHHTT-SCCCS-CEEECCTTCCHHHHHHH
T ss_pred eCcHhHHHHHHH-hccCC-EEEEeCCCCCHHHHHHh
Confidence 777666665543 34676 555564 7877654443
No 104
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=98.52 E-value=2.4e-07 Score=78.57 Aligned_cols=98 Identities=21% Similarity=0.171 Sum_probs=66.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhc--CCcEEEEEEec-------------CCCCcchhhhc---c----CCCCCCccee-
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDS-------------HSVGEDIGMVC---D----MEQPLEIPVM- 91 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~--~~~eLvgvid~-------------~~~g~~~~~l~---g----~~~~~gi~v~- 91 (163)
|+||+|+|+ |++|+.++|.+.++ |++||+++-|. +..|+-.+++. + +. ...+.++
T Consensus 1 ~ikVgInG~-G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~-g~~i~v~~ 78 (337)
T 1rm4_O 1 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVD-GKVIKVVS 78 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEET-TEEEEEEC
T ss_pred CeEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEEC-CeEEEEEe
Confidence 589999997 99999999999999 99999999852 12333222221 1 00 1123333
Q ss_pred -CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeC
Q 031216 92 -SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 92 -~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigt 137 (163)
.+++++-.. +..+|+|+++|......+.+...++.|..+|+=+
T Consensus 79 ~~dp~~i~w~---~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iS 122 (337)
T 1rm4_O 79 DRNPVNLPWG---DMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLIT 122 (337)
T ss_dssp CSCGGGSCHH---HHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEES
T ss_pred cCChhhCccc---ccCCCEEEECCCchhhHHHHHHHHHcCCEEEEEC
Confidence 345443110 1279999988766777899999999998887644
No 105
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=98.52 E-value=2.9e-07 Score=78.86 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=67.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHH-HHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT-MVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~--~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~-ell~~~~~~~~~DVVI 111 (163)
++||+|+||+|+.|+++++.+.++ |..+|..+..++..|+... +.+ .+..+ .+++ +.+ .++|+|+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~~----~~~~~-~~~~~~~~------~~~Dvvf 69 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKD----QDITI-EETTETAF------EGVDIAL 69 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ETT----EEEEE-EECCTTTT------TTCSEEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ecC----CCceE-eeCCHHHh------cCCCEEE
Confidence 589999999999999999999987 8999998877766776554 211 12222 2222 223 3899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeCCC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYVPH 139 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigttg 139 (163)
.++......+++..+++.|+.+|--+..
T Consensus 70 ~a~~~~~s~~~a~~~~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 70 FSAGSSTSAKYAPYAVKAGVVVVDNTSY 97 (366)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred ECCChHhHHHHHHHHHHCCCEEEEcCCc
Confidence 6665555688999999999998865543
No 106
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=98.52 E-value=3.2e-07 Score=73.24 Aligned_cols=93 Identities=20% Similarity=0.219 Sum_probs=66.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHH-HhcCCcEEEEEEecCCCCcchhh-hccCCCCCCccee--CCHHHHHhcccccCCccE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAV-TKARGMEVAGAIDSHSVGEDIGM-VCDMEQPLEIPVM--SDLTMVLGSISQSKARAV 109 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i-~~~~~~eLvgvid~~~~g~~~~~-l~g~~~~~gi~v~--~~l~ell~~~~~~~~~DV 109 (163)
++.||+|+|| |++|+.+++.+ ....+++++|++|.++.- ..+. . -.|++|+ +++++++.+ .++|+
T Consensus 83 ~~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~dp~~-kiG~~~-----i~GvpV~~~~dL~~~v~~----~~Id~ 151 (212)
T 3keo_A 83 STTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDLDSND-LVGKTT-----EDGIPVYGISTINDHLID----SDIET 151 (212)
T ss_dssp SCEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEECTTST-TTTCBC-----TTCCBEEEGGGHHHHC-C----CSCCE
T ss_pred CCCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeCCchh-ccCcee-----ECCeEEeCHHHHHHHHHH----cCCCE
Confidence 4579999995 99999999874 245799999999954310 1121 1 1356665 677777763 78999
Q ss_pred EEEccCchhHHHHHHHHHHcCCcEEEeC
Q 031216 110 VIDFTDASTVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigt 137 (163)
+|.+++.....+.+..+.+.|++-|.=-
T Consensus 152 vIIAvPs~~aq~v~d~lv~~GIk~I~nF 179 (212)
T 3keo_A 152 AILTVPSTEAQEVADILVKAGIKGILSF 179 (212)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEEEEC
T ss_pred EEEecCchhHHHHHHHHHHcCCCEEEEc
Confidence 9966655555788899999999988533
No 107
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.51 E-value=1.4e-07 Score=75.56 Aligned_cols=97 Identities=12% Similarity=0.119 Sum_probs=67.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||+|+| +|+||+.+++.+.+. +.+++.++|++. .....+.. ..++.+++++++++. ++|+||.++
T Consensus 10 ~m~i~iiG-~G~mG~~~a~~l~~~-g~~~v~~~~~~~--~~~~~~~~---~~g~~~~~~~~~~~~------~~Dvvi~av 76 (266)
T 3d1l_A 10 DTPIVLIG-AGNLATNLAKALYRK-GFRIVQVYSRTE--ESARELAQ---KVEAEYTTDLAEVNP------YAKLYIVSL 76 (266)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSSH--HHHHHHHH---HTTCEEESCGGGSCS------CCSEEEECC
T ss_pred CCeEEEEc-CCHHHHHHHHHHHHC-CCeEEEEEeCCH--HHHHHHHH---HcCCceeCCHHHHhc------CCCEEEEec
Confidence 47999999 599999999998754 788788888642 12222221 236667888888764 899999888
Q ss_pred CchhHHHHHHHHHH---cCCcEEEeCCCCCHHH
Q 031216 115 DASTVYDNVKQATA---FGMRSVVYVPHIQLET 144 (163)
Q Consensus 115 ~p~~~~~~~~~al~---~G~~vVigttg~~~e~ 144 (163)
.+..+.+.+....+ .|..+|.-+++.+.+.
T Consensus 77 ~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 77 KDSAFAELLQGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGG
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEECCCCCchHH
Confidence 77766555554443 5666777666777554
No 108
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=98.49 E-value=2.9e-07 Score=77.82 Aligned_cols=100 Identities=22% Similarity=0.176 Sum_probs=65.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCc-----chhhhccCC-------------CCCCcceeC--CH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGE-----DIGMVCDME-------------QPLEIPVMS--DL 94 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~-----~~~~l~g~~-------------~~~gi~v~~--~l 94 (163)
|+||||+| .|++|++++|.+.++|++||+++.|....+. +.....+.. ....+.++. |+
T Consensus 1 ~ikVgI~G-~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEEC-cCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 58999999 5999999999999999999999988522111 000111100 000122342 45
Q ss_pred HHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCC
Q 031216 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (163)
Q Consensus 95 ~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigtt 138 (163)
+++... +..+|+|+++|......+.+...++.|..+|.=+.
T Consensus 80 ~~i~w~---~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa 120 (330)
T 1gad_O 80 ANLKWD---EVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 120 (330)
T ss_dssp GGGCHH---HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESS
T ss_pred hhCccc---cccCCEEEECCCccccHHHHHHHHHCCCEEEEECC
Confidence 543110 03799999877666778999999999998776443
No 109
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.48 E-value=3.6e-07 Score=78.48 Aligned_cols=119 Identities=9% Similarity=0.119 Sum_probs=76.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCCC-CcchhhhccC------C-CCCCcceeCCHHHHHhcccccC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV-GEDIGMVCDM------E-QPLEIPVMSDLTMVLGSISQSK 105 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~~-g~~~~~l~g~------~-~~~gi~v~~~l~ell~~~~~~~ 105 (163)
|+||+|+|+ |++|+.+++.+.+++++ ..+.+++++.. .+...+..+. . ...++.-.+++++++.. .
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~----~ 75 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE----V 75 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH----H
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh----h
Confidence 579999997 99999999999988876 44556775421 1111111110 0 00111112456677752 3
Q ss_pred CccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCC--------CHHHHHHHHHHhhhcCeEE
Q 031216 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHI--------QLETVSALSAFCDKASMVS 159 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~--------~~e~~~~L~~~A~~~~Vv~ 159 (163)
++|+||+++.|....+.+..|++.|++++- ++.+ ......++.+.|++.++..
T Consensus 76 ~~DvVin~ag~~~~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~ 136 (405)
T 4ina_A 76 KPQIVLNIALPYQDLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMA 136 (405)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEE
T ss_pred CCCEEEECCCcccChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEE
Confidence 599999999888888999999999999885 3322 1233357888888877653
No 110
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=98.47 E-value=1.3e-06 Score=75.15 Aligned_cols=93 Identities=14% Similarity=0.075 Sum_probs=65.7
Q ss_pred CCeeEEEEcCCCHHHHHHHH-HHHhcC--CcEEEEEEecCCCCcchhhhccCCCCCCccee--CCHHHHHhcccccCCcc
Q 031216 34 SNIKVIINGAVKEIGRAAVI-AVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARA 108 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~-~i~~~~--~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~--~~l~ell~~~~~~~~~D 108 (163)
+++||+|+||+|..|+++++ .+.++| ..+++.+..+ ..|+...++-+. ...+. .+.++ +. ++|
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~----~~~v~~~~~~~~-~~------~vD 70 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKN----ETTLKDATSIDD-LK------KCD 70 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCS----CCBCEETTCHHH-HH------TCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCC----ceEEEeCCChhH-hc------CCC
Confidence 45899999999999999999 888888 7899877665 677765554321 22222 23444 43 899
Q ss_pred EEEEccCchhHHHHHHHHHHcCC-cEEEeCC
Q 031216 109 VVIDFTDASTVYDNVKQATAFGM-RSVVYVP 138 (163)
Q Consensus 109 VVIDfT~p~~~~~~~~~al~~G~-~vVigtt 138 (163)
+|+.++......+.+..+++.|+ .+||=.+
T Consensus 71 vvf~a~~~~~s~~~~~~~~~~G~k~~VID~s 101 (377)
T 3uw3_A 71 VIITCQGGDYTNDVFPKLRAAGWNGYWIDAA 101 (377)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEECCChHHHHHHHHHHHHCCCCEEEEeCC
Confidence 99944444455789999999997 3555444
No 111
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=98.46 E-value=1.1e-06 Score=75.29 Aligned_cols=91 Identities=15% Similarity=0.022 Sum_probs=64.3
Q ss_pred eeEEEEcCCCHHHHHHHH-HHHhcC--CcEEEEEEecCCCCcchhhhccCCCCCCccee--CCHHHHHhcccccCCccEE
Q 031216 36 IKVIINGAVKEIGRAAVI-AVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~-~i~~~~--~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~--~~l~ell~~~~~~~~~DVV 110 (163)
+||+|+||+|..|+++++ .+.++| ..+++.+..++ .|+...++-+. ...+. .++++ + .++|+|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~----~~~~~~~~~~~~-~------~~~Dvv 68 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKD----AGMLHDAFDIES-L------KQLDAV 68 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSC----CCBCEETTCHHH-H------TTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCC----ceEEEecCChhH-h------ccCCEE
Confidence 689999999999999999 899888 78998876654 77766554321 22322 23444 3 389999
Q ss_pred EEccCchhHHHHHHHHHHcCC-cEEEeCC
Q 031216 111 IDFTDASTVYDNVKQATAFGM-RSVVYVP 138 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~-~vVigtt 138 (163)
+.++......+.+..+++.|. .+||=.+
T Consensus 69 f~a~~~~~s~~~~~~~~~~G~k~~VID~s 97 (370)
T 3pzr_A 69 ITCQGGSYTEKVYPALRQAGWKGYWIDAA 97 (370)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred EECCChHHHHHHHHHHHHCCCCEEEEeCC
Confidence 955444445789999999997 3555444
No 112
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=98.46 E-value=3.9e-07 Score=77.01 Aligned_cols=91 Identities=16% Similarity=0.171 Sum_probs=64.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHH--hcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHH-HHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVT--KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTM-VLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~--~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~e-ll~~~~~~~~~DVVI 111 (163)
++||+|+||+|++|+.+++.+. .+|.++|+++.+++..|+... +.+ ..+.+. +++. .+ ..+|+|+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~g----~~i~~~-~~~~~~~------~~~DvV~ 73 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAE----SSLRVG-DVDSFDF------SSVGLAF 73 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETT----EEEECE-EGGGCCG------GGCSEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cCC----cceEEe-cCCHHHh------cCCCEEE
Confidence 4799999999999999999998 779999999887655554322 111 122222 2221 13 3799999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEEeC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigt 137 (163)
.++......+++..+++.|+.+|.-+
T Consensus 74 ~a~g~~~s~~~a~~~~~aG~kvId~S 99 (340)
T 2hjs_A 74 FAAAAEVSRAHAERARAAGCSVIDLS 99 (340)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred EcCCcHHHHHHHHHHHHCCCEEEEeC
Confidence 66655566889999999999987533
No 113
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=98.46 E-value=3.2e-07 Score=77.67 Aligned_cols=99 Identities=24% Similarity=0.221 Sum_probs=65.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-------------CCCCcchhhh------ccCCCCCCcceeC--C
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-------------HSVGEDIGMV------CDMEQPLEIPVMS--D 93 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-------------~~~g~~~~~l------~g~~~~~gi~v~~--~ 93 (163)
|+||+|+|+ |++|+.++|.+.++|+++++++.|. +..|+-.+++ +-.. ...+.++. +
T Consensus 1 mikVgI~G~-G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~-g~~i~v~~~~d 78 (334)
T 3cmc_O 1 AVKVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVN-GKEIIVKAERD 78 (334)
T ss_dssp CEEEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEET-TEEEEEECCSS
T ss_pred CeEEEEECC-CHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEEC-CEEEEEEecCC
Confidence 689999997 9999999999999999999999874 1122110000 0000 11344442 5
Q ss_pred HHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 94 l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
++++... +..+|+|+++|......+.+...++.|.. +||--+
T Consensus 79 p~~i~w~---~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~p 121 (334)
T 3cmc_O 79 PENLAWG---EIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAP 121 (334)
T ss_dssp GGGCCTG---GGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred hhhcCcc---cCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCC
Confidence 5554210 13799999877666778999999999973 555333
No 114
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.45 E-value=1.5e-06 Score=72.04 Aligned_cols=110 Identities=11% Similarity=0.113 Sum_probs=72.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+++||+|+| +|.||+.+++.+.+ .+.++. ++|++. .....+. ..++..++++++++. ++|+||.+
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~l~----~~g~~~~~~~~e~~~------~aDvVi~~ 94 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCE-AGYALQ-VWNRTP--ARAASLA----ALGATIHEQARAAAR------DADIVVSM 94 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----TTTCEEESSHHHHHT------TCSEEEEC
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HCCCEeeCCHHHHHh------cCCEEEEE
Confidence 467999999 69999999999874 578876 467542 2223332 346777899999885 89999955
Q ss_pred cCchhH-HHHH-----HHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 114 TDASTV-YDNV-----KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 114 T~p~~~-~~~~-----~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
...... .+.+ ...+..|..+|. ++..++...+++.+..++.++.+
T Consensus 95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~-~st~~~~~~~~~~~~~~~~g~~~ 145 (320)
T 4dll_A 95 LENGAVVQDVLFAQGVAAAMKPGSLFLD-MASITPREARDHAARLGALGIAH 145 (320)
T ss_dssp CSSHHHHHHHHTTTCHHHHCCTTCEEEE-CSCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHcchhHHhhCCCCCEEEe-cCCCCHHHHHHHHHHHHHcCCEE
Confidence 542333 3332 123445655554 45555677777777777666544
No 115
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=98.45 E-value=5.1e-07 Score=76.57 Aligned_cols=94 Identities=16% Similarity=0.176 Sum_probs=63.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhc--CCcEEEEEEec-------------CCCCcchhhhc--c--CC-CCCCccee--C
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDS-------------HSVGEDIGMVC--D--ME-QPLEIPVM--S 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~--~~~eLvgvid~-------------~~~g~~~~~l~--g--~~-~~~gi~v~--~ 92 (163)
|+||+|+|+ |++|+.++|.+.++ |+++++++.|. +..|+-.+++. + +. ....++++ .
T Consensus 2 ~ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~ 80 (339)
T 3b1j_A 2 TIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDR 80 (339)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCS
T ss_pred ceEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecC
Confidence 489999997 99999999999998 99999998764 11222211110 0 00 01123443 4
Q ss_pred CHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc
Q 031216 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR 132 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~ 132 (163)
|++++... +.++|+|+++|......+.+...++.|..
T Consensus 81 dp~~l~w~---~~~vDvV~e~tg~~~s~e~a~~~l~~Gak 117 (339)
T 3b1j_A 81 NPLNLPWK---EWDIDLVIESTGVFVTAEGASKHIQAGAK 117 (339)
T ss_dssp CGGGSCTT---TTTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred ChHHCccc---ccCCCEEEECCCccccHHHHHHHHHcCCc
Confidence 66665321 13799999888767778899999999977
No 116
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=98.45 E-value=1.9e-06 Score=73.61 Aligned_cols=92 Identities=12% Similarity=0.050 Sum_probs=62.9
Q ss_pred CeeEEEEcCCCHHHHHHHH-HHHhc--CCcEEEEEEecCCCCcchhhhccCCCCCCcceeC--CHHHHHhcccccCCccE
Q 031216 35 NIKVIINGAVKEIGRAAVI-AVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS--DLTMVLGSISQSKARAV 109 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~-~i~~~--~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~--~l~ell~~~~~~~~~DV 109 (163)
|+||+|+||+|++|+.+++ .+.++ +.+++..+..+ ..|+.+..+-| ..+.+.+ ++++ +. ++|+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~~~~g----~~i~~~~~~~~~~-~~------~~Dv 68 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAPSFGG----TTGTLQDAFDLEA-LK------ALDI 68 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCGGGT----CCCBCEETTCHHH-HH------TCSE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCccccCC----CceEEEecCChHH-hc------CCCE
Confidence 6899999999999999999 55544 34677655444 46765432222 2344432 4444 33 8999
Q ss_pred EEEccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 110 VIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
|++++......+++..+++.|++ +||..+
T Consensus 69 Vf~a~g~~~s~~~a~~~~~~G~k~vVID~s 98 (367)
T 1t4b_A 69 IVTCQGGDYTNEIYPKLRESGWQGYWIDAA 98 (367)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred EEECCCchhHHHHHHHHHHCCCCEEEEcCC
Confidence 99776666678999999999973 566554
No 117
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=98.44 E-value=5.4e-07 Score=76.55 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=67.0
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHH-HHHhcccccCCccEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT-MVLGSISQSKARAVVID 112 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~--~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~-ell~~~~~~~~~DVVID 112 (163)
+||+|+||+|..|+++++.+.++ |.++|+.+..++..|+.+. +.+ ....+ .+++ +.+ .++|+|+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~----~~~~~-~~~~~~~~------~~~Dvvf~ 69 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRG----QEIEV-EDAETADP------SGLDIALF 69 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETT----EEEEE-EETTTSCC------TTCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecC----CceEE-EeCCHHHh------ccCCEEEE
Confidence 79999999999999999999988 8999998877777777655 221 12222 2222 122 38999996
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP 138 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt 138 (163)
++......+++..+++.|+.||--+.
T Consensus 70 a~~~~~s~~~a~~~~~~G~~vID~Sa 95 (344)
T 3tz6_A 70 SAGSAMSKVQAPRFAAAGVTVIDNSS 95 (344)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CCChHHHHHHHHHHHhCCCEEEECCC
Confidence 66555568899999999998886444
No 118
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=98.44 E-value=2.9e-07 Score=78.64 Aligned_cols=101 Identities=18% Similarity=0.116 Sum_probs=64.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe-cCCCCcc-----hhhhccCC-------------CCCCcceeC--
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGED-----IGMVCDME-------------QPLEIPVMS-- 92 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid-~~~~g~~-----~~~l~g~~-------------~~~gi~v~~-- 92 (163)
+|+||+|+|+ |++|+.++|.+.++|++||+++.| ....+.- .....|.. ....+.++.
T Consensus 16 ~~ikVgI~G~-G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~ 94 (354)
T 3cps_A 16 FQGTLGINGF-GRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAK 94 (354)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCS
T ss_pred cceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecC
Confidence 4689999997 999999999999999999999988 3211100 00001100 001233442
Q ss_pred CHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
+++++... +..+|+|+++|......+.+...++.|.+ +||-.+
T Consensus 95 dp~~i~w~---~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~p 138 (354)
T 3cps_A 95 DPAEIPWG---ASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 138 (354)
T ss_dssp CGGGCCHH---HHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred ChHHCCcc---cCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCC
Confidence 55554210 02799999887667778899999999974 565343
No 119
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.39 E-value=3.5e-07 Score=71.95 Aligned_cols=113 Identities=21% Similarity=0.078 Sum_probs=67.8
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
.+|+||+|+| +|+||..+++.+.+ .+.++..++|++. ..+..+.. ..++..+.+..+.+. .+|+||.
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~-~g~~V~~v~~r~~--~~~~~l~~---~~g~~~~~~~~~~~~------~aDvVil 87 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTA-AQIPAIIANSRGP--ASLSSVTD---RFGASVKAVELKDAL------QADVVIL 87 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHH-TTCCEEEECTTCG--GGGHHHHH---HHTTTEEECCHHHHT------TSSEEEE
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEECCCH--HHHHHHHH---HhCCCcccChHHHHh------cCCEEEE
Confidence 3478999999 69999999999875 5788887677643 12222211 224444444445553 8999997
Q ss_pred ccCchhHHHHHHHHH-HcCCcEEEeCCCCC-----HH------HHHHHHHHhhhcCeE
Q 031216 113 FTDASTVYDNVKQAT-AFGMRSVVYVPHIQ-----LE------TVSALSAFCDKASMV 158 (163)
Q Consensus 113 fT~p~~~~~~~~~al-~~G~~vVigttg~~-----~e------~~~~L~~~A~~~~Vv 158 (163)
++.|....+.+.... ..++.+|.-+.++. .+ ..+.|.+......|+
T Consensus 88 avp~~~~~~v~~~l~~~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv 145 (220)
T 4huj_A 88 AVPYDSIADIVTQVSDWGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVV 145 (220)
T ss_dssp ESCGGGHHHHHTTCSCCTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEE
T ss_pred eCChHHHHHHHHHhhccCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEE
Confidence 777766666554321 13555554443552 11 345566655444444
No 120
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.39 E-value=2e-06 Score=69.46 Aligned_cols=108 Identities=9% Similarity=0.060 Sum_probs=68.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
.|+||+|+| +|.||+.+++.+.+ .+.++. ++| +. .....+. ..++.+++++++++. ++|+||.+
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~-~g~~V~-~~~-~~--~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~ 65 (295)
T 1yb4_A 2 NAMKLGFIG-LGIMGSPMAINLAR-AGHQLH-VTT-IG--PVADELL----SLGAVNVETARQVTE------FADIIFIM 65 (295)
T ss_dssp --CEEEECC-CSTTHHHHHHHHHH-TTCEEE-ECC-SS--CCCHHHH----TTTCBCCSSHHHHHH------TCSEEEEC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHh-CCCEEE-EEc-CH--HHHHHHH----HcCCcccCCHHHHHh------cCCEEEEE
Confidence 457999999 69999999999875 578876 455 32 2222332 235667789999875 89999966
Q ss_pred cCchhHHHHHHH-------HHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 114 TDASTVYDNVKQ-------ATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 114 T~p~~~~~~~~~-------al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
+++....+.+.. .+..|..+|.-+++ .+...++|.+..++.++.
T Consensus 66 vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~-~~~~~~~l~~~~~~~g~~ 116 (295)
T 1yb4_A 66 VPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSI-SPIETKRFAQRVNEMGAD 116 (295)
T ss_dssp CSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCC-CHHHHHHHHHHHHTTTEE
T ss_pred CCCHHHHHHHHhCchhHhhcCCCCCEEEECCCC-CHHHHHHHHHHHHHcCCe
Confidence 644443333332 24456666554444 455567777776665543
No 121
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.39 E-value=3.3e-06 Score=68.52 Aligned_cols=108 Identities=13% Similarity=0.066 Sum_probs=72.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||+|+| +|.||+.+++.+.+ .+.++. ++|++. .....+. ..++..++++++++. ++|+||.+..
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~~~~------~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVK-AGCSVT-IWNRSP--EKAEELA----ALGAERAATPCEVVE------SCPVTFAMLA 66 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSG--GGGHHHH----HTTCEECSSHHHHHH------HCSEEEECCS
T ss_pred CEEEEEe-ecHHHHHHHHHHHH-CCCeEE-EEcCCH--HHHHHHH----HCCCeecCCHHHHHh------cCCEEEEEcC
Confidence 6899999 69999999999875 578877 567643 2223332 346777899999885 7899995554
Q ss_pred -chhHHHHH------HHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 116 -ASTVYDNV------KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 116 -p~~~~~~~------~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|....+.+ ...++.|..+|. +++.+++...++.+..++.++.+
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~-~st~~~~~~~~~~~~~~~~g~~~ 116 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGYVD-MSTVDPATSQRIGVAVVAKGGRF 116 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEE-CSCCCHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEe-CCCCCHHHHHHHHHHHHHhCCEE
Confidence 33344433 234556665544 56666777777877777665543
No 122
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=98.39 E-value=8.1e-07 Score=75.30 Aligned_cols=100 Identities=23% Similarity=0.189 Sum_probs=66.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHh---cCCcEEEEEEecC-------------CCCcchhhh------ccCCCCCCccee-
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTK---ARGMEVAGAIDSH-------------SVGEDIGMV------CDMEQPLEIPVM- 91 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~---~~~~eLvgvid~~-------------~~g~~~~~l------~g~~~~~gi~v~- 91 (163)
++||+|+|+ |++|+.++|.+.+ +|+++|+++.|.. ..|+-.+++ +-.. ...+.++
T Consensus 2 ~ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~-g~~i~v~~ 79 (339)
T 2x5j_O 2 TVRVAINGF-GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVG-DDAIRVLH 79 (339)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEET-TEEEEEEC
T ss_pred CeEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEEC-CEEEEEEe
Confidence 489999996 9999999999998 8999999988741 111111000 0000 1123444
Q ss_pred -CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCCC
Q 031216 92 -SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (163)
Q Consensus 92 -~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigttg 139 (163)
.|++++... +.++|+|+++|......+.+...++.|.+ |||-.++
T Consensus 80 ~~dp~~l~~~---~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 80 ERSLQSLPWR---ELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp CSSGGGCCHH---HHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred cCChHHCccc---ccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 355554210 12799999888777778999999999987 5554444
No 123
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=98.38 E-value=1.2e-06 Score=77.47 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=68.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcE---EEEEEecCCCCcchhhhccCCCCCCccee-CCHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGME---VAGAIDSHSVGEDIGMVCDMEQPLEIPVM-SDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~e---Lvgvid~~~~g~~~~~l~g~~~~~gi~v~-~~l~ell~~~~~~~~~DVV 110 (163)
+.||.|+| .|.||+.+++.+.++++++ ++ ++|....+.++.+..|.. ...+.+. ++.++++..+. .+.|+|
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~-vaD~~~~~~~~~~~~g~~-~~~~~Vdadnv~~~l~aLl--~~~DvV 87 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVT-IIAAEGTKVDVAQQYGVS-FKLQQITPQNYLEVIGSTL--EENDFL 87 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEE-EEESSCCSCCHHHHHTCE-EEECCCCTTTHHHHTGGGC--CTTCEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEE-EeccchhhhhHHhhcCCc-eeEEeccchhHHHHHHHHh--cCCCEE
Confidence 47899999 5999999999999999884 44 446555556655555432 2233343 44444443222 134999
Q ss_pred EEccCchhHHHHHHHHHHcCCcEEE
Q 031216 111 IDFTDASTVYDNVKQATAFGMRSVV 135 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVi 135 (163)
|+.+.|....+.+++|+++|++.+-
T Consensus 88 IN~s~~~~~l~Im~acleaGv~YlD 112 (480)
T 2ph5_A 88 IDVSIGISSLALIILCNQKGALYIN 112 (480)
T ss_dssp EECCSSSCHHHHHHHHHHHTCEEEE
T ss_pred EECCccccCHHHHHHHHHcCCCEEE
Confidence 9999999999999999999999886
No 124
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=98.37 E-value=5.9e-07 Score=65.77 Aligned_cols=106 Identities=13% Similarity=0.182 Sum_probs=80.5
Q ss_pred CCCeeEEEEcCC---CHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccE
Q 031216 33 QSNIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (163)
Q Consensus 33 ~~~irV~VvGa~---G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DV 109 (163)
+.|-+|+|+|++ ++.|..+.+.+.+. ++++.. +.+.. .++ .|.+.|.|++++- . +|+
T Consensus 2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~-g~~V~p-VnP~~-----~~i------~G~~~y~sl~dlp------~-vDl 61 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLKSH-GHEFIP-VGRKK-----GEV------LGKTIINERPVIE------G-VDT 61 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHHHH-TCCEEE-ESSSC-----SEE------TTEECBCSCCCCT------T-CCE
T ss_pred CCCCEEEEEccCCCCCCHHHHHHHHHHHC-CCeEEE-ECCCC-----CcC------CCeeccCChHHCC------C-CCE
Confidence 345679999997 67999999999864 667664 33321 222 3567888888763 5 999
Q ss_pred EEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 110 VIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
++.|+.|+...+.++.|.+.|++.|+-.+|+.. +++.++|++.|+-.-|
T Consensus 62 avi~~p~~~v~~~v~e~~~~g~k~v~~~~G~~~---~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 62 VTLYINPQNQLSEYNYILSLKPKRVIFNPGTEN---EELEEILSENGIEPVI 110 (122)
T ss_dssp EEECSCHHHHGGGHHHHHHHCCSEEEECTTCCC---HHHHHHHHHTTCEEEE
T ss_pred EEEEeCHHHHHHHHHHHHhcCCCEEEECCCCCh---HHHHHHHHHcCCeEEC
Confidence 998999999999999999999988888889853 4688888888864433
No 125
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.37 E-value=2.2e-06 Score=70.29 Aligned_cols=107 Identities=15% Similarity=0.110 Sum_probs=67.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||+|+| .|.||+.+++.+.+ .+.++. ++|++. .....+. ..++.++.++++++. ++|+||.++
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~-~g~~V~-~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~DvVi~av 94 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLK-MGHTVT-VWNRTA--EKCDLFI----QEGARLGRTPAEVVS------TCDITFACV 94 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSSG--GGGHHHH----HTTCEECSCHHHHHH------HCSEEEECC
T ss_pred CCeEEEEc-ccHHHHHHHHHHHh-CCCEEE-EEeCCH--HHHHHHH----HcCCEEcCCHHHHHh------cCCEEEEeC
Confidence 47999999 69999999999875 567764 567542 1222222 235566788888875 799999666
Q ss_pred C-chhHHHHHHH------HHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 115 D-ASTVYDNVKQ------ATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 115 ~-p~~~~~~~~~------al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
. |....+.+.. .+..|..+|.-+ ..+.+..++|.+...+.++
T Consensus 95 ~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s-~~~~~~~~~l~~~~~~~~~ 143 (316)
T 2uyy_A 95 SDPKAAKDLVLGPSGVLQGIRPGKCYVDMS-TVDADTVTELAQVIVSRGG 143 (316)
T ss_dssp SSHHHHHHHHHSTTCGGGGCCTTCEEEECS-CCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHcCchhHhhcCCCCCEEEECC-CCCHHHHHHHHHHHHHcCC
Confidence 5 4444444432 234566665433 4556666677766654443
No 126
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=98.36 E-value=8.9e-07 Score=76.28 Aligned_cols=94 Identities=16% Similarity=0.176 Sum_probs=63.3
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhc--CCcEEEEEEec-------------CCCCcchhhhc--c--CC-CCCCccee--C
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDS-------------HSVGEDIGMVC--D--ME-QPLEIPVM--S 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~--~~~eLvgvid~-------------~~~g~~~~~l~--g--~~-~~~gi~v~--~ 92 (163)
|+||+|+|+ |++||.++|.+.++ ++++|+++-|. +..|+-.+++. + +. ....+.++ .
T Consensus 2 ~ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~ 80 (380)
T 2d2i_A 2 TIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDR 80 (380)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCS
T ss_pred CcEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecC
Confidence 489999996 99999999999988 99999998773 12232211110 0 00 01123343 4
Q ss_pred CHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc
Q 031216 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR 132 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~ 132 (163)
|++++... +..+|+|+++|......+.+...++.|..
T Consensus 81 dp~~l~w~---~~gvDvV~e~TG~f~s~e~a~~hl~aGak 117 (380)
T 2d2i_A 81 NPLNLPWK---EWDIDLVIESTGVFVTAEGASKHIQAGAK 117 (380)
T ss_dssp CGGGCCHH---HHTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred ChHHCCcc---cCCCCEEEECCCccccHHHHHHHHHcCCc
Confidence 56664320 12799999888777778999999999977
No 127
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.35 E-value=4e-06 Score=69.12 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=73.2
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
...|+||+|+| +|.||+.+++.+.+ .+.++. ++|++. ..+..+. ..++..++++++++. .+|+||
T Consensus 18 ~~~m~~I~iIG-~G~mG~~~A~~l~~-~G~~V~-~~dr~~--~~~~~l~----~~g~~~~~~~~~~~~------~aDvvi 82 (310)
T 3doj_A 18 GSHMMEVGFLG-LGIMGKAMSMNLLK-NGFKVT-VWNRTL--SKCDELV----EHGASVCESPAEVIK------KCKYTI 82 (310)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSG--GGGHHHH----HTTCEECSSHHHHHH------HCSEEE
T ss_pred cccCCEEEEEC-ccHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHH----HCCCeEcCCHHHHHH------hCCEEE
Confidence 44578999999 69999999999875 578876 467543 2223332 346677889999885 789998
Q ss_pred EccC-chhHHHHH---H---HHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 112 DFTD-ASTVYDNV---K---QATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 112 DfT~-p~~~~~~~---~---~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+.+ |....+.+ . ..+..|..+ +-++..++....++.+..++.++.+
T Consensus 83 ~~vp~~~~~~~v~~~~~~l~~~l~~g~~v-v~~st~~~~~~~~~~~~~~~~g~~~ 136 (310)
T 3doj_A 83 AMLSDPCAALSVVFDKGGVLEQICEGKGY-IDMSTVDAETSLKINEAITGKGGRF 136 (310)
T ss_dssp ECCSSHHHHHHHHHSTTCGGGGCCTTCEE-EECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred EEcCCHHHHHHHHhCchhhhhccCCCCEE-EECCCCCHHHHHHHHHHHHHcCCEE
Confidence 5553 23333333 1 223445544 4455666777778877776665533
No 128
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.35 E-value=2.5e-06 Score=70.52 Aligned_cols=108 Identities=18% Similarity=0.169 Sum_probs=69.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
.|+||+|+| +|.||..+++.+.+. +. ++. ++|++........+. ..++..++++++++. ++|+||.
T Consensus 23 ~~~~I~iIG-~G~mG~~~A~~L~~~-G~~~V~-~~dr~~~~~~~~~~~----~~g~~~~~~~~e~~~------~aDvVi~ 89 (312)
T 3qsg_A 23 NAMKLGFIG-FGEAASAIASGLRQA-GAIDMA-AYDAASAESWRPRAE----ELGVSCKASVAEVAG------ECDVIFS 89 (312)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHH-SCCEEE-EECSSCHHHHHHHHH----HTTCEECSCHHHHHH------HCSEEEE
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHC-CCCeEE-EEcCCCCHHHHHHHH----HCCCEEeCCHHHHHh------cCCEEEE
Confidence 368999999 699999999998854 66 555 667631001112221 346777889999885 7999997
Q ss_pred ccCchhHHHHHHHHHH---cCCcEEEeCCCCCHHHHHHHHHHhhhc
Q 031216 113 FTDASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKA 155 (163)
Q Consensus 113 fT~p~~~~~~~~~al~---~G~~vVigttg~~~e~~~~L~~~A~~~ 155 (163)
+..+....+.+....+ .|. +|+-.+...+....++.+..++.
T Consensus 90 ~vp~~~~~~~~~~l~~~l~~~~-ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 90 LVTAQAALEVAQQAGPHLCEGA-LYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp CSCTTTHHHHHHHHGGGCCTTC-EEEECCCCCHHHHHHHHHHHHHH
T ss_pred ecCchhHHHHHHhhHhhcCCCC-EEEEcCCCCHHHHHHHHHHHHhh
Confidence 7666655555544333 343 55555566676667776666554
No 129
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.34 E-value=6e-06 Score=70.11 Aligned_cols=112 Identities=12% Similarity=0.043 Sum_probs=70.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||+|+| +|.||+.+++.+.+ .+.++. ++|++. ..+..+. ..++..++++++++.. ...+|+||.+.
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~~-~G~~V~-v~dr~~--~~~~~l~----~~g~~~~~s~~e~~~~---a~~~DvVi~~v 89 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLRK-GGHECV-VYDLNV--NAVQALE----REGIAGARSIEEFCAK---LVKPRVVWLMV 89 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----TTTCBCCSSHHHHHHH---SCSSCEEEECS
T ss_pred CCEEEEEC-chHHHHHHHHHHHh-CCCEEE-EEeCCH--HHHHHHH----HCCCEEeCCHHHHHhc---CCCCCEEEEeC
Confidence 48999999 79999999999885 577766 567542 2223332 3466778899998862 13569999666
Q ss_pred CchhHHHHHHHH---HHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 115 DASTVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 115 ~p~~~~~~~~~a---l~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+..+.+.+... ++.|.-+|. .+...+....++.+..++.++-|
T Consensus 90 p~~~v~~vl~~l~~~l~~g~iiId-~st~~~~~~~~~~~~l~~~g~~~ 136 (358)
T 4e21_A 90 PAAVVDSMLQRMTPLLAANDIVID-GGNSHYQDDIRRADQMRAQGITY 136 (358)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEE-CSSCCHHHHHHHHHHHHTTTCEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEe-CCCCChHHHHHHHHHHHHCCCEE
Confidence 555334444333 334555554 44444556666776666666543
No 130
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.31 E-value=3.3e-06 Score=68.27 Aligned_cols=107 Identities=15% Similarity=0.116 Sum_probs=70.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||+|+| +|.||+.+++.+.+ .+.++. ++|++. .....+. ..++.+++++++++. .+|+||.+++
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~-~g~~V~-~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMK-HGYPLI-IYDVFP--DACKEFQ----DAGEQVVSSPADVAE------KADRIITMLP 65 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHH-TTCCEE-EECSST--HHHHHHH----TTTCEECSSHHHHHH------HCSEEEECCS
T ss_pred CeEEEEe-ccHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HcCCeecCCHHHHHh------cCCEEEEeCC
Confidence 4899999 69999999999875 467765 567542 2223332 346777889998875 7899996663
Q ss_pred ch-hHHHHHHH------HHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 116 AS-TVYDNVKQ------ATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 116 p~-~~~~~~~~------al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
+. ...+.+.. .++.|..+|. +.+.+.++..++.+...+.++.
T Consensus 66 ~~~~~~~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~g~~ 114 (296)
T 2gf2_A 66 TSINAIEAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKMGAV 114 (296)
T ss_dssp SHHHHHHHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHcCCE
Confidence 33 33343332 2345665555 7788888877776665544443
No 131
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.31 E-value=5e-06 Score=67.36 Aligned_cols=107 Identities=15% Similarity=0.172 Sum_probs=69.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||+|+| +|.||+.+++.+.+ .+.++. ++|+.. .....+. ..++.+++++++++. ++|+||.++
T Consensus 4 ~~~i~iiG-~G~~G~~~a~~l~~-~g~~V~-~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~v 68 (301)
T 3cky_A 4 SIKIGFIG-LGAMGKPMAINLLK-EGVTVY-AFDLME--ANVAAVV----AQGAQACENNQKVAA------ASDIIFTSL 68 (301)
T ss_dssp CCEEEEEC-CCTTHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHH----TTTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHH----HCCCeecCCHHHHHh------CCCEEEEEC
Confidence 57999999 69999999999875 578876 567532 1222222 236667889999885 799999666
Q ss_pred CchhH-HHHH------HHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 115 DASTV-YDNV------KQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 115 ~p~~~-~~~~------~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
++... .+.+ ...+..|..+|.-+++. ++..++|.+...+.++
T Consensus 69 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~-~~~~~~l~~~~~~~g~ 117 (301)
T 3cky_A 69 PNAGIVETVMNGPGGVLSACKAGTVIVDMSSVS-PSSTLKMAKVAAEKGI 117 (301)
T ss_dssp SSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC-HHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHcCcchHhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHcCC
Confidence 43333 3333 23455677776655555 4455667666655444
No 132
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=98.31 E-value=1.7e-06 Score=74.28 Aligned_cols=115 Identities=10% Similarity=0.069 Sum_probs=80.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee-----C--------------CHHH
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-----S--------------DLTM 96 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~-----~--------------~l~e 96 (163)
.||+|+|++|.+|+.+++.+.+++.++++++...... ..+.+..- ..+..++ . .+.+
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~-~~l~~q~~---~f~p~~v~v~~~~~~~~~l~~~~~G~~~l~e 79 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNL-ELAFKIVK---EFNVKNVAITGDVEFEDSSINVWKGSHSIEE 79 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCH-HHHHHHHH---HHTCCEEEECSSCCCCCSSSEEEESTTHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCH-HHHHHHHH---HcCCCEEEEccHHHHHHHHHHHccCHHHHHH
Confidence 7899999999999999999998888999999653211 01111100 1111111 1 2245
Q ss_pred HHhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 97 VLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 97 ll~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
++.. .++|+|+....-.........|+++|++|.+..-+......+.+.++++++++-
T Consensus 80 l~~~----~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g~~ 137 (376)
T 3a06_A 80 MLEA----LKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTE 137 (376)
T ss_dssp HHHH----HCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHCCE
T ss_pred HhcC----CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcCCE
Confidence 5543 579999977766777899999999999999955554556677888888887653
No 133
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=98.28 E-value=5.9e-06 Score=68.47 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=74.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
|.||+++| +|.||..+++.+.+ .+.++. +.|++. .....+. ..|..+.+++.++.. ..|+|| .+
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~-~G~~v~-v~dr~~--~~~~~l~----~~Ga~~a~s~~e~~~------~~dvv~-~~ 66 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLK-AGYLLN-VFDLVQ--SAVDGLV----AAGASAARSARDAVQ------GADVVI-SM 66 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHH----HTTCEECSSHHHHHT------TCSEEE-EC
T ss_pred cCEEEEee-ehHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HcCCEEcCCHHHHHh------cCCcee-ec
Confidence 67999999 89999999999984 688877 577643 2233333 346777899999885 899988 44
Q ss_pred Cchh--HHHHHHH------HHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 115 DAST--VYDNVKQ------ATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 115 ~p~~--~~~~~~~------al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.|+. +.+.+.. .++.|. +||-.+..++++..++.+.+++.++-|
T Consensus 67 l~~~~~v~~V~~~~~g~~~~~~~g~-iiId~sT~~p~~~~~~a~~~~~~G~~~ 118 (300)
T 3obb_A 67 LPASQHVEGLYLDDDGLLAHIAPGT-LVLECSTIAPTSARKIHAAARERGLAM 118 (300)
T ss_dssp CSCHHHHHHHHHSSSSSTTSCCC-C-EEEECSCCCHHHHHHHHHHHHTTTCEE
T ss_pred CCchHHHHHHHhchhhhhhcCCCCC-EEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 4433 3333221 122343 555566677889999999999888765
No 134
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=98.27 E-value=1.7e-06 Score=73.16 Aligned_cols=95 Identities=21% Similarity=0.187 Sum_probs=62.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhc--CCcEEEEEEecC-------------CCCcchhhh------ccCCCCCCcceeC--
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSH-------------SVGEDIGMV------CDMEQPLEIPVMS-- 92 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~--~~~eLvgvid~~-------------~~g~~~~~l------~g~~~~~gi~v~~-- 92 (163)
+||+|+|+ |++|+.++|.+.++ |+++|+++-|.. ..|+-.+++ +... ...+.++.
T Consensus 1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~-g~~i~v~~~~ 78 (332)
T 1hdg_O 1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVD-GKEIKVFAEP 78 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEET-TEEEEEECCS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEEC-CeEEEEEecC
Confidence 58999997 99999999999999 999999998731 122211110 0000 11344442
Q ss_pred CHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEE
Q 031216 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVV 135 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVi 135 (163)
+++++... +.++|+|+++|......+.+...++.|.+ +||
T Consensus 79 dp~~l~w~---~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVI 119 (332)
T 1hdg_O 79 DPSKLPWK---DLGVDFVIESTGVFRNREKAELHLQAGAKKVII 119 (332)
T ss_dssp SGGGSCHH---HHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred ChHHCccc---ccCCCEEEECCccchhHHHHHHHHHcCCcEEEE
Confidence 55554210 12799999877666678899999999973 554
No 135
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.25 E-value=5.1e-06 Score=67.65 Aligned_cols=108 Identities=14% Similarity=0.112 Sum_probs=68.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+|+||+|+| +|.||+.+++.+.+ .+.++. ++|++. .....+. ..++..++++++++. ++|+||.+
T Consensus 2 ~m~~I~iiG-~G~mG~~~a~~l~~-~G~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~~~~~------~aDvvi~~ 66 (302)
T 2h78_A 2 HMKQIAFIG-LGHMGAPMATNLLK-AGYLLN-VFDLVQ--SAVDGLV----AAGASAARSARDAVQ------GADVVISM 66 (302)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHH----HTTCEECSSHHHHHT------TCSEEEEC
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HCCCeEcCCHHHHHh------CCCeEEEE
Confidence 478999999 69999999999875 578876 457542 2222332 236677889999885 89999966
Q ss_pred cCch-hHHHHHH------HHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 114 TDAS-TVYDNVK------QATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 114 T~p~-~~~~~~~------~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
.+.. ...+.+. ..+..|..+ +-++.......++|.+..++.++
T Consensus 67 vp~~~~~~~v~~~~~~~~~~l~~~~~v-i~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 67 LPASQHVEGLYLDDDGLLAHIAPGTLV-LECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp CSCHHHHHHHHHSSSCGGGSSCSSCEE-EECSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHcCchhHHhcCCCCcEE-EECCCCCHHHHHHHHHHHHHcCC
Confidence 5323 3333332 123445544 44555556666677776665543
No 136
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=98.23 E-value=3.6e-06 Score=73.63 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=81.9
Q ss_pred CeeEEEEcCCC---HHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVK---EIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G---~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+.+|+|+|+++ ++|..+++.+.+.. -..+..+++. +. + -.|+++|.+++++.+ .+|+++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g-~~~v~pVnP~--~~---~------i~G~~~y~sl~~lp~------~~Dlav 69 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIK--EE---E------VQGVKAYKSVKDIPD------EIDLAI 69 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSS--CS---E------ETTEECBSSTTSCSS------CCSEEE
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcC-CCEEEEECCC--CC---e------ECCEeccCCHHHcCC------CCCEEE
Confidence 56899999974 78999999997665 3344455543 21 2 247899999998763 899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEEE-eCCCCCH--H----HHHHHHHHhhhcCeEEcC
Q 031216 112 DFTDASTVYDNVKQATAFGMRSVV-YVPHIQL--E----TVSALSAFCDKASMVSTG 161 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVi-gttg~~~--e----~~~~L~~~A~~~~Vv~tg 161 (163)
.|++|+.+.+.++.|.+.|++.++ =+.|+.+ + ..++|.++|++.++-.-|
T Consensus 70 i~vp~~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viG 126 (457)
T 2csu_A 70 IVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIG 126 (457)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEEC
T ss_pred EecCHHHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEc
Confidence 899999999999999999998654 4447742 1 257899999998876554
No 137
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.23 E-value=1.3e-05 Score=66.17 Aligned_cols=108 Identities=12% Similarity=0.116 Sum_probs=71.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
-||+++| +|.||..+++.+. ..++++. ++|++. .....+. +.|..+.+++.++.. +.|+||-+-.
T Consensus 6 ~kIgfIG-LG~MG~~mA~~L~-~~G~~V~-v~dr~~--~~~~~l~----~~G~~~~~s~~e~~~------~~dvvi~~l~ 70 (297)
T 4gbj_A 6 EKIAFLG-LGNLGTPIAEILL-EAGYELV-VWNRTA--SKAEPLT----KLGATVVENAIDAIT------PGGIVFSVLA 70 (297)
T ss_dssp CEEEEEC-CSTTHHHHHHHHH-HTTCEEE-EC---------CTTT----TTTCEECSSGGGGCC------TTCEEEECCS
T ss_pred CcEEEEe-cHHHHHHHHHHHH-HCCCeEE-EEeCCH--HHHHHHH----HcCCeEeCCHHHHHh------cCCceeeecc
Confidence 4899999 8999999999998 4689987 467543 1222332 457778889999874 8999884433
Q ss_pred chhH-HH----HHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 116 ASTV-YD----NVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 116 p~~~-~~----~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+... .+ .+...+..|. +++-.+..++++..++.+.+++.++-|
T Consensus 71 ~~~~~~~v~~~~~~~~~~~~~-iiid~sT~~p~~~~~~~~~~~~~g~~~ 118 (297)
T 4gbj_A 71 DDAAVEELFSMELVEKLGKDG-VHVSMSTISPETSRQLAQVHEWYGAHY 118 (297)
T ss_dssp SHHHHHHHSCHHHHHHHCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred chhhHHHHHHHHHHhhcCCCe-EEEECCCCChHHHHHHHHHHHhcCCce
Confidence 3222 22 2334445554 445455567888999999988887765
No 138
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.21 E-value=8.5e-06 Score=65.90 Aligned_cols=107 Identities=15% Similarity=0.091 Sum_probs=68.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||+|+| +|.||+.+++.+.+ .+.++ .++|+.. .....+. ..++.++.++++++. ++|+||.++.
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~-~g~~V-~~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLK-AGYSL-VVSDRNP--EAIADVI----AAGAETASTAKAIAE------QCDVIITMLP 70 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHH-TTCEE-EEECSCH--HHHHHHH----HTTCEECSSHHHHHH------HCSEEEECCS
T ss_pred ceEEEEC-chHHHHHHHHHHHh-CCCEE-EEEeCCH--HHHHHHH----HCCCeecCCHHHHHh------CCCEEEEECC
Confidence 6999999 69999999999875 47786 4667542 1222222 235667789998875 7999996665
Q ss_pred chhH-HHHH------HHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 116 ASTV-YDNV------KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 116 p~~~-~~~~------~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
.... ...+ ...+..|..+|.-.++. +...++|.+...+.++.
T Consensus 71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~-~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 71 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIA-PLASREISDALKAKGVE 119 (299)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCC-HHHHHHHHHHHHTTTCE
T ss_pred CHHHHHHHHhCcchHhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHcCCe
Confidence 2333 3333 23455677665544444 45556677766655543
No 139
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.19 E-value=1.2e-05 Score=66.16 Aligned_cols=113 Identities=12% Similarity=0.065 Sum_probs=71.7
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
+..+++||+|+| +|.||+.+++.+.+ .+.++. ++|++. .....+. ..++..++++++++. .+|+|
T Consensus 5 ~~~~~~~IgiIG-~G~mG~~~A~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~e~~~------~aDvV 69 (306)
T 3l6d_A 5 DESFEFDVSVIG-LGAMGTIMAQVLLK-QGKRVA-IWNRSP--GKAAALV----AAGAHLCESVKAALS------ASPAT 69 (306)
T ss_dssp CCCCSCSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSSH--HHHHHHH----HHTCEECSSHHHHHH------HSSEE
T ss_pred cccCCCeEEEEC-CCHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HCCCeecCCHHHHHh------cCCEE
Confidence 344578999999 69999999999874 578876 457542 1222222 235666789999885 78999
Q ss_pred EEccCchh-HHHHHH----HHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 111 IDFTDAST-VYDNVK----QATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 111 IDfT~p~~-~~~~~~----~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
|.+..+.. ..+.+. ..+..|.-+|. ++..+++...++.+..++.++-|
T Consensus 70 i~~vp~~~~~~~v~~~~~l~~~~~g~ivid-~st~~~~~~~~l~~~~~~~g~~~ 122 (306)
T 3l6d_A 70 IFVLLDNHATHEVLGMPGVARALAHRTIVD-YTTNAQDEGLALQGLVNQAGGHY 122 (306)
T ss_dssp EECCSSHHHHHHHHTSTTHHHHTTTCEEEE-CCCCCTTHHHHHHHHHHHTTCEE
T ss_pred EEEeCCHHHHHHHhcccchhhccCCCEEEE-CCCCCHHHHHHHHHHHHHcCCeE
Confidence 96554333 333221 23445655544 55555666677777766655433
No 140
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=98.18 E-value=3.3e-05 Score=66.10 Aligned_cols=125 Identities=17% Similarity=0.141 Sum_probs=83.3
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcC----------------------CcEEEEEEec--CCCCcchhhhc-------
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKAR----------------------GMEVAGAIDS--HSVGEDIGMVC------- 80 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~----------------------~~eLvgvid~--~~~g~~~~~l~------- 80 (163)
.+.++||+|+|. |+.|+.++.-+...+ +++++++.|. ...|+++.+..
T Consensus 12 ~~~~~rVaIVGv-GN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~~~g~~~~~Di~iVaafDId~~KVG~~l~~A~~~~~n~~ 90 (367)
T 1gr0_A 12 ASTEVRVAIVGV-GNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNT 90 (367)
T ss_dssp --CCEEEEEECC-SHHHHHHHHHHHHTTTCCTTSCCTTCSCSEETTEEGGGEEEEEEEECBTTTTTSBHHHHTTSTTCCC
T ss_pred hccCCCEEEECc-ChHHHHHHHHHHHHhccCcccccCCccccccCCccCCCeEEEEEEcCChHHHHHHhhCCEecCCCch
Confidence 446899999996 999999999655444 7899999993 33454432211
Q ss_pred ----cCC----------CCCCcc------------eeCCHHHHHhcccccCCccEEEEccC---chhHHHHHHHHHHcCC
Q 031216 81 ----DME----------QPLEIP------------VMSDLTMVLGSISQSKARAVVIDFTD---ASTVYDNVKQATAFGM 131 (163)
Q Consensus 81 ----g~~----------~~~gi~------------v~~~l~ell~~~~~~~~~DVVIDfT~---p~~~~~~~~~al~~G~ 131 (163)
.++ ...++. +..|+.+.+.+ .+.||||..-. -....-|+.+|++.|+
T Consensus 91 ~~~~~v~~~~v~v~~g~~ldgia~~~~~~i~~s~~~~~Di~~~~~~----~~~dVvV~~lp~gs~~aS~~YA~Aal~ag~ 166 (367)
T 1gr0_A 91 IKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKE----AKVDVLVSYLPVGSEEADKFYAQCAIDAGV 166 (367)
T ss_dssp CCCSCCCCCCCBCEECCCTTSCCHHHHTTSCBCSSCCCCHHHHHHH----TTCSEEEECCCTTCHHHHHHHHHHHHHHTC
T ss_pred hhhhcccccCceEccCCCCCchhhhhhhccccccchhhHHHHHHHH----hCCcEEEEeeeCCCcCHHHHHHHHHHHcCC
Confidence 000 000111 12255566654 78999887642 1233568889999999
Q ss_pred cEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 132 RSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 132 ~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
+.|-++|.+... .+.+.+++++.++...|-
T Consensus 167 ~fvN~~P~~~~~-~P~~~el~~~~g~pi~Gd 196 (367)
T 1gr0_A 167 AFVNALPVFIAS-DPVWAKKFTDARVPIVGD 196 (367)
T ss_dssp EEEECSSCCSTT-SHHHHHHHHHHTCEEEES
T ss_pred ceEecCCccccC-CHHHHHHHHHcCCCEecc
Confidence 999999976543 366889999999888763
No 141
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=98.17 E-value=1.6e-05 Score=57.56 Aligned_cols=90 Identities=12% Similarity=0.132 Sum_probs=63.3
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeC--CHHHHHhcccccCCccEE
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS--DLTMVLGSISQSKARAVV 110 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~--~l~ell~~~~~~~~~DVV 110 (163)
+++.|++|+| .|..|+.+++.+.+.++++++|++|.... ..+.. -.|++++. ++.+.+.. ..+|.|
T Consensus 2 ~~~~~vlIiG-aG~~g~~l~~~l~~~~g~~vvg~~d~~~~--~~g~~-----i~g~pV~g~~~l~~~~~~----~~id~v 69 (141)
T 3nkl_A 2 NAKKKVLIYG-AGSAGLQLANMLRQGKEFHPIAFIDDDRK--KHKTT-----MQGITIYRPKYLERLIKK----HCISTV 69 (141)
T ss_dssp -CCEEEEEEC-CSHHHHHHHHHHHHSSSEEEEEEECSCGG--GTTCE-----ETTEEEECGGGHHHHHHH----HTCCEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCcEEEEEEECCcc--cCCCE-----ecCeEEECHHHHHHHHHH----CCCCEE
Confidence 3457999999 59999999999998889999999995421 11111 23667764 45555543 578987
Q ss_pred EEccCch----hHHHHHHHHHHcCCcEEE
Q 031216 111 IDFTDAS----TVYDNVKQATAFGMRSVV 135 (163)
Q Consensus 111 IDfT~p~----~~~~~~~~al~~G~~vVi 135 (163)
+ ++.|. ...+.+..+.+.|+++.+
T Consensus 70 i-ia~~~~~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 70 L-LAVPSASQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp E-ECCTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred E-EeCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 7 44442 225777889999999876
No 142
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.17 E-value=1.2e-05 Score=70.51 Aligned_cols=111 Identities=16% Similarity=0.143 Sum_probs=73.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce----eC---CHHHHHhcccccCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MS---DLTMVLGSISQSKA 106 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v----~~---~l~ell~~~~~~~~ 106 (163)
++.||+|+|+ |.+|+.+++.+.+.++.+++ +++++. .++.++.. ..++.. +. ++++++. +
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~-v~~R~~--~ka~~la~---~~~~~~~~~D~~d~~~l~~~l~------~ 88 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVT-VACRTL--ANAQALAK---PSGSKAISLDVTDDSALDKVLA------D 88 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEE-EEESSH--HHHHHHHG---GGTCEEEECCTTCHHHHHHHHH------T
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEE-EEECCH--HHHHHHHH---hcCCcEEEEecCCHHHHHHHHc------C
Confidence 4578999996 99999999999987788854 566542 12222221 111111 12 3445553 8
Q ss_pred ccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|+||.++.+.........|++.|++++. ...++++ ...|.+.|++.|+..
T Consensus 89 ~DvVIn~tp~~~~~~v~~a~l~~g~~vvd-~~~~~p~-~~~Ll~~Ak~aGv~~ 139 (467)
T 2axq_A 89 NDVVISLIPYTFHPNVVKSAIRTKTDVVT-SSYISPA-LRELEPEIVKAGITV 139 (467)
T ss_dssp SSEEEECSCGGGHHHHHHHHHHHTCEEEE-CSCCCHH-HHHHHHHHHHHTCEE
T ss_pred CCEEEECCchhhhHHHHHHHHhcCCEEEE-eecCCHH-HHHHHHHHHHcCCEE
Confidence 99999888766566778899999999876 3333444 467777888877644
No 143
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=98.15 E-value=1e-05 Score=65.56 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=70.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
|+||+|+| +|.||+.+++.+.+. +.++. ++|++. .....+. ..++..++++++++. +.|+||.+.
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~-G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~~~~------~advvi~~v 65 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRA-GFDVT-VWNRNP--AKCAPLV----ALGARQASSPAEVCA------ACDITIAML 65 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHH-TCCEE-EECSSG--GGGHHHH----HHTCEECSCHHHHHH------HCSEEEECC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHC-CCeEE-EEcCCH--HHHHHHH----HCCCeecCCHHHHHH------cCCEEEEEc
Confidence 57999999 699999999998854 67766 457543 1222322 235667789999885 789999655
Q ss_pred Cch-hHHHHH---H---HHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 115 DAS-TVYDNV---K---QATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 115 ~p~-~~~~~~---~---~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+. ...+.+ . ..+..|..+ +-++..++....++.+..++.++-|
T Consensus 66 ~~~~~~~~v~~~~~~l~~~l~~g~~v-v~~st~~~~~~~~~~~~~~~~g~~~ 116 (287)
T 3pdu_A 66 ADPAAAREVCFGANGVLEGIGGGRGY-IDMSTVDDETSTAIGAAVTARGGRF 116 (287)
T ss_dssp SSHHHHHHHHHSTTCGGGTCCTTCEE-EECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHcCchhhhhcccCCCEE-EECCCCCHHHHHHHHHHHHHcCCEE
Confidence 443 333333 1 223445544 4455566777777777776665543
No 144
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.15 E-value=1.4e-05 Score=63.56 Aligned_cols=105 Identities=18% Similarity=0.155 Sum_probs=68.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||+|+| .|.||..+++.+.+ .+.++.. .|+.........+. ..++. +++++++. ++|+||.+..
T Consensus 1 M~I~iIG-~G~mG~~la~~l~~-~g~~V~~-~~~~~~~~~~~~~~----~~g~~--~~~~~~~~------~aDvvi~~v~ 65 (264)
T 1i36_A 1 LRVGFIG-FGEVAQTLASRLRS-RGVEVVT-SLEGRSPSTIERAR----TVGVT--ETSEEDVY------SCPVVISAVT 65 (264)
T ss_dssp CEEEEES-CSHHHHHHHHHHHH-TTCEEEE-CCTTCCHHHHHHHH----HHTCE--ECCHHHHH------TSSEEEECSC
T ss_pred CeEEEEe-chHHHHHHHHHHHH-CCCeEEE-eCCccCHHHHHHHH----HCCCc--CCHHHHHh------cCCEEEEECC
Confidence 4899999 69999999999875 5788776 45421111122221 12333 67778775 8999997776
Q ss_pred chhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhc
Q 031216 116 ASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155 (163)
Q Consensus 116 p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~ 155 (163)
|....+.+......-.++|+-.++.+.+..++|.+...+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 66 PGVALGAARRAGRHVRGIYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp GGGHHHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHCSSS
T ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHHHhhC
Confidence 6656555554444333377767777777777888777654
No 145
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.10 E-value=4.7e-05 Score=62.23 Aligned_cols=108 Identities=12% Similarity=0.034 Sum_probs=69.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||+|+| +|+||+.+++.+.+ .+.++. ++|++.. ....+. ..++..+++++++. . +|+||.+.
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~-~G~~V~-~~dr~~~--~~~~~~----~~g~~~~~~~~~~~------~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTE-WPGGVT-VYDIRIE--AMTPLA----EAGATLADSVADVA------A-ADLIHITV 78 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTT-STTCEE-EECSSTT--TSHHHH----HTTCEECSSHHHHT------T-SSEEEECC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHH-CCCeEE-EEeCCHH--HHHHHH----HCCCEEcCCHHHHH------h-CCEEEEEC
Confidence 46899999 69999999999874 578876 4575431 222332 34667788999986 5 99999555
Q ss_pred C-chhHHHHHHHH---HHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 115 D-ASTVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 115 ~-p~~~~~~~~~a---l~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
. |....+.+... ++.|..+ +-++...+...+++.+..++.++.+
T Consensus 79 p~~~~~~~v~~~l~~~l~~g~iv-v~~st~~~~~~~~~~~~~~~~g~~~ 126 (296)
T 3qha_A 79 LDDAQVREVVGELAGHAKPGTVI-AIHSTISDTTAVELARDLKARDIHI 126 (296)
T ss_dssp SSHHHHHHHHHHHHTTCCTTCEE-EECSCCCHHHHHHHHHHHGGGTCEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEE-EEeCCCCHHHHHHHHHHHHHcCCEE
Confidence 4 22333444333 3345444 4455556777777877776666543
No 146
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.10 E-value=3.4e-05 Score=62.91 Aligned_cols=108 Identities=8% Similarity=0.115 Sum_probs=68.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc---EEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM---EVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~---eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
++||+|+| +|+||+.+++.+.+. +. ++. ++|++. .....+.. .+++.++.+..+++. ++|+||
T Consensus 3 ~~~I~iIG-~G~mG~aia~~l~~~-g~~~~~V~-v~dr~~--~~~~~l~~---~~gi~~~~~~~~~~~------~aDvVi 68 (280)
T 3tri_A 3 TSNITFIG-GGNMARNIVVGLIAN-GYDPNRIC-VTNRSL--DKLDFFKE---KCGVHTTQDNRQGAL------NADVVV 68 (280)
T ss_dssp CSCEEEES-CSHHHHHHHHHHHHT-TCCGGGEE-EECSSS--HHHHHHHH---TTCCEEESCHHHHHS------SCSEEE
T ss_pred CCEEEEEc-ccHHHHHHHHHHHHC-CCCCCeEE-EEeCCH--HHHHHHHH---HcCCEEeCChHHHHh------cCCeEE
Confidence 47899999 599999999998854 44 444 667543 22333321 357778889888874 899999
Q ss_pred EccCchhHHHHHHHH----HHcCCcEEEeCCCCCHHHHHHHHHHhhh-cCeEE
Q 031216 112 DFTDASTVYDNVKQA----TAFGMRSVVYVPHIQLETVSALSAFCDK-ASMVS 159 (163)
Q Consensus 112 DfT~p~~~~~~~~~a----l~~G~~vVigttg~~~e~~~~L~~~A~~-~~Vv~ 159 (163)
.+..|....+.+... +..+.-+|.-+.|++.++ |.+.... .+++.
T Consensus 69 lav~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~---l~~~l~~~~~vvr 118 (280)
T 3tri_A 69 LAVKPHQIKMVCEELKDILSETKILVISLAVGVTTPL---IEKWLGKASRIVR 118 (280)
T ss_dssp ECSCGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHH---HHHHHTCCSSEEE
T ss_pred EEeCHHHHHHHHHHHHhhccCCCeEEEEecCCCCHHH---HHHHcCCCCeEEE
Confidence 888777665555443 333334444345787655 4443332 44554
No 147
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.07 E-value=2.1e-05 Score=63.11 Aligned_cols=107 Identities=11% Similarity=-0.023 Sum_probs=63.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
|+||+|+| .|.||+.+++.+.+ +.++. ++|+.. .....+. ..++.+++ +++++. ++|+||.++
T Consensus 1 M~~i~iiG-~G~~G~~~a~~l~~--g~~V~-~~~~~~--~~~~~~~----~~g~~~~~-~~~~~~------~~D~vi~~v 63 (289)
T 2cvz_A 1 MEKVAFIG-LGAMGYPMAGHLAR--RFPTL-VWNRTF--EKALRHQ----EEFGSEAV-PLERVA------EARVIFTCL 63 (289)
T ss_dssp -CCEEEEC-CSTTHHHHHHHHHT--TSCEE-EECSST--HHHHHHH----HHHCCEEC-CGGGGG------GCSEEEECC
T ss_pred CCeEEEEc-ccHHHHHHHHHHhC--CCeEE-EEeCCH--HHHHHHH----HCCCcccC-HHHHHh------CCCEEEEeC
Confidence 57899999 69999999999885 88865 567542 1222221 11344455 666653 799999666
Q ss_pred Cchh-HHHHHHH---HHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 115 DAST-VYDNVKQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 115 ~p~~-~~~~~~~---al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+.. ..+.+.. .++.|..+|. .+.......++|.+..++.++.+
T Consensus 64 ~~~~~~~~v~~~l~~~l~~~~~vv~-~s~~~~~~~~~l~~~~~~~g~~~ 111 (289)
T 2cvz_A 64 PTTREVYEVAEALYPYLREGTYWVD-ATSGEPEASRRLAERLREKGVTY 111 (289)
T ss_dssp SSHHHHHHHHHHHTTTCCTTEEEEE-CSCCCHHHHHHHHHHHHTTTEEE
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEE-CCCCCHHHHHHHHHHHHHcCCEE
Confidence 5444 3333332 2334555554 33344555667777766555433
No 148
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.05 E-value=1.9e-05 Score=64.65 Aligned_cols=109 Identities=12% Similarity=0.097 Sum_probs=68.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-eCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-~~~l~ell~~~~~~~~~DVVID 112 (163)
+++||+|+| +|.||..+++.+.+ .+.++. ++|++. .....+. ..+... ++++++++. .+|+||.
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~e~~~------~aDvvi~ 70 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLR-AGLSTW-GADLNP--QACANLL----AEGACGAAASAREFAG------VVDALVI 70 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----HTTCSEEESSSTTTTT------TCSEEEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHH-CCCeEE-EEECCH--HHHHHHH----HcCCccccCCHHHHHh------cCCEEEE
Confidence 457999999 69999999999874 578876 457542 1222222 234444 788888774 8999995
Q ss_pred ccCchhHHHHHH-------HHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 113 FTDASTVYDNVK-------QATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 113 fT~p~~~~~~~~-------~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
+..+....+.+. ..++.|.-+|. ++..++....++.+..++.++.
T Consensus 71 ~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~-~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 71 LVVNAAQVRQVLFGEDGVAHLMKPGSAVMV-SSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp CCSSHHHHHHHHC--CCCGGGSCTTCEEEE-CSCCCHHHHHHHHHHHHTTTCE
T ss_pred ECCCHHHHHHHHhChhhHHhhCCCCCEEEe-cCCCCHHHHHHHHHHHHHcCCe
Confidence 554433333332 23445555544 5556677777777776665553
No 149
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.03 E-value=8.7e-06 Score=64.71 Aligned_cols=98 Identities=9% Similarity=0.122 Sum_probs=63.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc----EEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM----EVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~----eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
++||+|+| +|+||+.+++.+.+ .+. ++. ++|++. .....+.. ..++.+++++++++. ++|+|
T Consensus 2 ~~~i~iIG-~G~mG~~~a~~l~~-~g~~~~~~V~-~~~r~~--~~~~~~~~---~~g~~~~~~~~e~~~------~aDvV 67 (247)
T 3gt0_A 2 DKQIGFIG-CGNMGMAMIGGMIN-KNIVSSNQII-CSDLNT--ANLKNASE---KYGLTTTTDNNEVAK------NADIL 67 (247)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHH-TTSSCGGGEE-EECSCH--HHHHHHHH---HHCCEECSCHHHHHH------HCSEE
T ss_pred CCeEEEEC-ccHHHHHHHHHHHh-CCCCCCCeEE-EEeCCH--HHHHHHHH---HhCCEEeCChHHHHH------hCCEE
Confidence 47999999 69999999999875 454 554 567542 12222221 236677889999885 79999
Q ss_pred EEccCchhHHHHHHHH---HHcCCcEEEeCCCCCHHHHH
Q 031216 111 IDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQLETVS 146 (163)
Q Consensus 111 IDfT~p~~~~~~~~~a---l~~G~~vVigttg~~~e~~~ 146 (163)
|.++.|....+.+... +..|..+|.-..+.+.+..+
T Consensus 68 ilav~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~ 106 (247)
T 3gt0_A 68 ILSIKPDLYASIINEIKEIIKNDAIIVTIAAGKSIESTE 106 (247)
T ss_dssp EECSCTTTHHHHC---CCSSCTTCEEEECSCCSCHHHHH
T ss_pred EEEeCHHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHH
Confidence 9777666666555433 23455555555678766543
No 150
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.99 E-value=9.5e-05 Score=64.50 Aligned_cols=136 Identities=18% Similarity=0.203 Sum_probs=69.6
Q ss_pred ccccccccccceeeeccCCCCC-----CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhcc-CC--
Q 031216 12 MHHISQNVKAKRFISCSTNPPQ-----SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-ME-- 83 (163)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~-----~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g-~~-- 83 (163)
-||-|--|....-+--++-.++ .++||+|+| +|+||..++..+.+ +.++++ +|+.. ..+..+.. ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~mkIaVIG-lG~mG~~lA~~La~--G~~V~~-~D~~~--~~v~~l~~g~~~i 81 (432)
T 3pid_A 8 HHHSSGLVPRGSHMASMTGGQQMGRGSEFMKITISG-TGYVGLSNGVLIAQ--NHEVVA-LDIVQ--AKVDMLNQKISPI 81 (432)
T ss_dssp ---------------------------CCCEEEEEC-CSHHHHHHHHHHHT--TSEEEE-ECSCH--HHHHHHHTTCCSS
T ss_pred ccccCCcccccchhhhccCCcccccccCCCEEEEEC-cCHHHHHHHHHHHc--CCeEEE-EecCH--HHhhHHhccCCcc
Confidence 3455544444444433333333 357999999 69999999998874 899885 67431 11111110 00
Q ss_pred -----------CCCCcceeCCHHHHHhcccccCCccEEEEccCch-----------hHH---HHHHHHHHcCCcEEEeCC
Q 031216 84 -----------QPLEIPVMSDLTMVLGSISQSKARAVVIDFTDAS-----------TVY---DNVKQATAFGMRSVVYVP 138 (163)
Q Consensus 84 -----------~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~p~-----------~~~---~~~~~al~~G~~vVigtt 138 (163)
...++..++|+++++. .+|+||.++... .+. +.+.. ++.|.-||..+
T Consensus 82 ~e~~l~~ll~~~~~~l~~ttd~~ea~~------~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S- 153 (432)
T 3pid_A 82 VDKEIQEYLAEKPLNFRATTDKHDAYR------NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS- 153 (432)
T ss_dssp CCHHHHHHHHHSCCCEEEESCHHHHHT------TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS-
T ss_pred ccccHHHHHhhccCCeEEEcCHHHHHh------CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC-
Confidence 0124667789988875 899999665221 122 22233 56676665544
Q ss_pred CCCHHHHHHHHHHhhhcCeEEcC
Q 031216 139 HIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 139 g~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
...+...+++.+...+.++++++
T Consensus 154 Tv~pgtt~~l~~~l~~~~v~~sP 176 (432)
T 3pid_A 154 TIPVGFTRDIKERLGIDNVIFSP 176 (432)
T ss_dssp CCCTTHHHHHHHHHTCCCEEECC
T ss_pred CCChHHHHHHHHHHhhccEeecC
Confidence 44455556666666667887754
No 151
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.98 E-value=1.9e-05 Score=60.69 Aligned_cols=96 Identities=10% Similarity=0.035 Sum_probs=58.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC-CcchhhhccCC-CCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV-GEDIGMVCDME-QPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~-g~~~~~l~g~~-~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+||+|+|++|+||+.+++.+.+ .+.++.. ++++.. .+...+..+.. ...++. ++++++++. ++|+||.+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~-~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~D~Vi~~ 71 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLAT-LGHEIVV-GSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAE------ACDIAVLT 71 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEE-EESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHH------HCSEEEEC
T ss_pred CeEEEEcCCCHHHHHHHHHHHH-CCCEEEE-EeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHh------cCCEEEEe
Confidence 4899999779999999999875 5778764 564321 01111101100 001233 467878775 79999987
Q ss_pred cCchhHHHHHHH---HHHcCCcEEEeCCCCC
Q 031216 114 TDASTVYDNVKQ---ATAFGMRSVVYVPHIQ 141 (163)
Q Consensus 114 T~p~~~~~~~~~---al~~G~~vVigttg~~ 141 (163)
+.|....+.+.. .+ .+..+|.-++|++
T Consensus 72 ~~~~~~~~~~~~l~~~~-~~~~vi~~~~g~~ 101 (212)
T 1jay_A 72 IPWEHAIDTARDLKNIL-REKIVVSPLVPVS 101 (212)
T ss_dssp SCHHHHHHHHHHTHHHH-TTSEEEECCCCEE
T ss_pred CChhhHHHHHHHHHHHc-CCCEEEEcCCCcC
Confidence 776665544432 33 4776776666665
No 152
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=97.98 E-value=2.3e-05 Score=66.39 Aligned_cols=96 Identities=21% Similarity=0.199 Sum_probs=62.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhc---CCcEEEEEEec-------------CCCCcchhh------hccCCCCCCccee-
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKA---RGMEVAGAIDS-------------HSVGEDIGM------VCDMEQPLEIPVM- 91 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~---~~~eLvgvid~-------------~~~g~~~~~------l~g~~~~~gi~v~- 91 (163)
|+||+|.|+ |++||.++|.+.++ ++++++++-|. +..|+-.++ -+-.. ...+.++
T Consensus 1 ~ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~-g~~i~v~~ 78 (335)
T 1obf_O 1 TIRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVN-GDKIRVDA 78 (335)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEET-TEEEEEEC
T ss_pred CcEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEEC-CEEEEEEE
Confidence 489999995 99999999999888 89999999883 111110000 00000 1234444
Q ss_pred -CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEE
Q 031216 92 -SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVV 135 (163)
Q Consensus 92 -~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVi 135 (163)
.+++++-.. +..+|+|+++|-.....+.+...++.|.. ||+
T Consensus 79 ~~dp~~~~w~---~~gvDiV~estG~f~s~e~a~~h~~aGakkVvi 121 (335)
T 1obf_O 79 NRNPAQLPWG---ALKVDVVLECTGFFTTKEKAGAHIKGGAKKVII 121 (335)
T ss_dssp CSCGGGSCTT---TTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEE
T ss_pred cCCcccCCcc---ccCCCEEEEccCccccHHHHHHHHHcCCCEEEE
Confidence 255554321 24899999877666667888888888865 555
No 153
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.97 E-value=4e-05 Score=66.80 Aligned_cols=109 Identities=14% Similarity=0.122 Sum_probs=70.3
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCC-Ccce----eC---CHHHHHhcccccCC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPV----MS---DLTMVLGSISQSKA 106 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~-gi~v----~~---~l~ell~~~~~~~~ 106 (163)
+.||+|+| +|.||+.+++.+.+ .+.++ .+++++. .++.++.. .. ++.. .. ++++++. +
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~-~G~~V-~v~~R~~--~~a~~la~---~~~~~~~~~~Dv~d~~~l~~~l~------~ 68 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTD-SGIKV-TVACRTL--ESAKKLSA---GVQHSTPISLDVNDDAALDAEVA------K 68 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHT-TTCEE-EEEESSH--HHHHHTTT---TCTTEEEEECCTTCHHHHHHHHT------T
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-CcCEE-EEEECCH--HHHHHHHH---hcCCceEEEeecCCHHHHHHHHc------C
Confidence 46899999 69999999999984 67884 4566532 12222221 11 1111 12 3445553 8
Q ss_pred ccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
+|+||.++.+..+.+....+++.|+|++.. ..+.+ ....|.++|++.++.+
T Consensus 69 ~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~-~~~~~-~~~~l~~aA~~aGv~~ 119 (450)
T 1ff9_A 69 HDLVISLIPYTFHATVIKSAIRQKKHVVTT-SYVSP-AMMELDQAAKDAGITV 119 (450)
T ss_dssp SSEEEECCC--CHHHHHHHHHHHTCEEEES-SCCCH-HHHHTHHHHHHTTCEE
T ss_pred CcEEEECCccccchHHHHHHHhCCCeEEEe-ecccH-HHHHHHHHHHHCCCeE
Confidence 999998886655666778889999998764 23334 4577888888888754
No 154
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.94 E-value=4.5e-05 Score=63.22 Aligned_cols=108 Identities=11% Similarity=0.034 Sum_probs=70.0
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEecCCC--C---cchhhhccCCCCCCcceeC-CHHHHHhcccccCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSV--G---EDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKA 106 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid~~~~--g---~~~~~l~g~~~~~gi~v~~-~l~ell~~~~~~~~ 106 (163)
+++||+|+| +|.||..+++.+.+ .+ .++. ++|++.. . .....+. ..++ ++ ++++++. +
T Consensus 23 M~m~IgvIG-~G~mG~~lA~~L~~-~G~~~V~-~~dr~~~~~~~~~~~~~~~~----~~g~--~~~s~~e~~~------~ 87 (317)
T 4ezb_A 23 MMTTIAFIG-FGEAAQSIAGGLGG-RNAARLA-AYDLRFNDPAASGALRARAA----ELGV--EPLDDVAGIA------C 87 (317)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHT-TTCSEEE-EECGGGGCTTTHHHHHHHHH----HTTC--EEESSGGGGG------G
T ss_pred cCCeEEEEC-ccHHHHHHHHHHHH-cCCCeEE-EEeCCCccccchHHHHHHHH----HCCC--CCCCHHHHHh------c
Confidence 468999999 69999999999874 56 7776 5675421 0 0111111 2344 56 7888774 7
Q ss_pred ccEEEEccCchhHHHHHHHHHH---cCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 107 RAVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~---~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
.|+||.+..+....+.+..... .|. +|+-+++.++....++.+..++.++
T Consensus 88 aDvVi~avp~~~~~~~~~~i~~~l~~~~-ivv~~st~~p~~~~~~~~~l~~~g~ 140 (317)
T 4ezb_A 88 ADVVLSLVVGAATKAVAASAAPHLSDEA-VFIDLNSVGPDTKALAAGAIATGKG 140 (317)
T ss_dssp CSEEEECCCGGGHHHHHHHHGGGCCTTC-EEEECCSCCHHHHHHHHHHHHTSSC
T ss_pred CCEEEEecCCHHHHHHHHHHHhhcCCCC-EEEECCCCCHHHHHHHHHHHHHcCC
Confidence 9999966666655555544332 344 5555666777778888877776654
No 155
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=97.93 E-value=1.9e-05 Score=66.69 Aligned_cols=98 Identities=27% Similarity=0.217 Sum_probs=64.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-------------CCCCcchhhh------ccCCCCCCcceeC--CH
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-------------HSVGEDIGMV------CDMEQPLEIPVMS--DL 94 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-------------~~~g~~~~~l------~g~~~~~gi~v~~--~l 94 (163)
+||+|+|+ |++||.++|.+.++ +++++++-|. +..|+-.+++ +-.. ...+.++. ++
T Consensus 1 ikVgInG~-G~IGr~vlr~l~~~-~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~-g~~i~v~~~~dp 77 (331)
T 2g82_O 1 MKVGINGF-GRIGRQVFRILHSR-GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVD-GKAIRATAVKDP 77 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEET-TEEEEEECCSSG
T ss_pred CEEEEECc-CHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEEC-CEEEEEEecCCh
Confidence 58999996 99999999999888 9999998773 1233211111 0000 12345552 55
Q ss_pred HHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCC-cEEEeCCC
Q 031216 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGM-RSVVYVPH 139 (163)
Q Consensus 95 ~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~-~vVigttg 139 (163)
+++... +..+|+|+++|......+.+...++.|. .+|+..++
T Consensus 78 ~~l~w~---~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps 120 (331)
T 2g82_O 78 KEIPWA---EAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (331)
T ss_dssp GGSCTT---TTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred hhCccc---ccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCC
Confidence 554321 1378999987766677889999999995 46665543
No 156
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.89 E-value=7.8e-05 Score=61.69 Aligned_cols=99 Identities=9% Similarity=0.046 Sum_probs=63.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCC----cEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARG----MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~----~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
++||+|+| .|.||..+++.+.+ .+ .++. +++++........+. ..|+.+.++..+++. .+|+|
T Consensus 22 ~mkI~iIG-~G~mG~ala~~L~~-~G~~~~~~V~-v~~r~~~~~~~~~l~----~~G~~~~~~~~e~~~------~aDvV 88 (322)
T 2izz_A 22 SMSVGFIG-AGQLAFALAKGFTA-AGVLAAHKIM-ASSPDMDLATVSALR----KMGVKLTPHNKETVQ------HSDVL 88 (322)
T ss_dssp CCCEEEES-CSHHHHHHHHHHHH-TTSSCGGGEE-EECSCTTSHHHHHHH----HHTCEEESCHHHHHH------HCSEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHH-CCCCCcceEE-EECCCccHHHHHHHH----HcCCEEeCChHHHhc------cCCEE
Confidence 46899999 59999999999875 44 5554 566543111222322 346667788888775 79999
Q ss_pred EEccCchhHHHHHHHHHH---cCCcEEEeCCCCCHHHHH
Q 031216 111 IDFTDASTVYDNVKQATA---FGMRSVVYVPHIQLETVS 146 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~---~G~~vVigttg~~~e~~~ 146 (163)
|.+..|....+.+..... .+.-+|.-+++.+.++.+
T Consensus 89 ilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~ 127 (322)
T 2izz_A 89 FLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIE 127 (322)
T ss_dssp EECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHH
T ss_pred EEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHH
Confidence 977777666665554332 355555544578765443
No 157
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.88 E-value=5.1e-05 Score=58.36 Aligned_cols=91 Identities=15% Similarity=0.054 Sum_probs=54.0
Q ss_pred CCee-EEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-------eCCHHHHHhcccccC
Q 031216 34 SNIK-VIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSK 105 (163)
Q Consensus 34 ~~ir-V~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-------~~~l~ell~~~~~~~ 105 (163)
.|+| |.|+|++|.+|+.+++.+.+..+.+++++..+.. ..+.++... ..++.+ .++++++++
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~--~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~------ 72 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK--TRIPPEIID--HERVTVIEGSFQNPGXLEQAVT------ 72 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH--HHSCHHHHT--STTEEEEECCTTCHHHHHHHHT------
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc--ccchhhccC--CCceEEEECCCCCHHHHHHHHc------
Confidence 4566 9999999999999999998568899887654321 011121000 112221 123345553
Q ss_pred CccEEEEccCchh--HHHHHHHHHHcCC-cEE
Q 031216 106 ARAVVIDFTDAST--VYDNVKQATAFGM-RSV 134 (163)
Q Consensus 106 ~~DVVIDfT~p~~--~~~~~~~al~~G~-~vV 134 (163)
.+|+||...-+.. ....+..+.+.|. ++|
T Consensus 73 ~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv 104 (221)
T 3r6d_A 73 NAEVVFVGAMESGSDMASIVKALSRXNIRRVI 104 (221)
T ss_dssp TCSEEEESCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEcCCCCChhHHHHHHHHHhcCCCeEE
Confidence 8999997664311 3445566667775 444
No 158
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.88 E-value=0.00017 Score=59.78 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=62.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc--EEEEEEecCCCCcchhhhccCCCCCCc--ceeCCHHH-HHhcccccCCccE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTM-VLGSISQSKARAV 109 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~--eLvgvid~~~~g~~~~~l~g~~~~~gi--~v~~~l~e-ll~~~~~~~~~DV 109 (163)
++||+|+| +|.||..+++.+.+ .+. ++. ++|++.. ...... ..|+ ..++++++ ++. ++|+
T Consensus 33 ~~kI~IIG-~G~mG~slA~~l~~-~G~~~~V~-~~dr~~~--~~~~a~----~~G~~~~~~~~~~~~~~~------~aDv 97 (314)
T 3ggo_A 33 MQNVLIVG-VGFMGGSFAKSLRR-SGFKGKIY-GYDINPE--SISKAV----DLGIIDEGTTSIAKVEDF------SPDF 97 (314)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHH-TTCCSEEE-EECSCHH--HHHHHH----HTTSCSEEESCTTGGGGG------CCSE
T ss_pred CCEEEEEe-eCHHHHHHHHHHHh-CCCCCEEE-EEECCHH--HHHHHH----HCCCcchhcCCHHHHhhc------cCCE
Confidence 37999999 69999999999875 466 665 4675421 112211 2233 34678887 664 8999
Q ss_pred EEEccCchhHHHHHHHHH---HcCCcEEEeCCCCCHHHHHHHHHHh
Q 031216 110 VIDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFC 152 (163)
Q Consensus 110 VIDfT~p~~~~~~~~~al---~~G~~vVigttg~~~e~~~~L~~~A 152 (163)
||.++.|....+.+.... +.+. +|+-.++......+.+.+..
T Consensus 98 Vilavp~~~~~~vl~~l~~~l~~~~-iv~d~~Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 98 VMLSSPVRTFREIAKKLSYILSEDA-TVTDQGSVKGKLVYDLENIL 142 (314)
T ss_dssp EEECSCGGGHHHHHHHHHHHSCTTC-EEEECCSCCTHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHhhccCCCc-EEEECCCCcHHHHHHHHHhc
Confidence 997777766655554443 3343 44444444434455555544
No 159
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.87 E-value=5.5e-05 Score=59.93 Aligned_cols=93 Identities=10% Similarity=0.066 Sum_probs=61.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCC---cEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARG---MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~---~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
++||+|+| .|.||+.+++.+.+... .++. ++|++.. ..++.+++++++++. ++|+||
T Consensus 4 ~m~i~iiG-~G~mG~~~a~~l~~~g~~~~~~v~-~~~~~~~------------~~g~~~~~~~~~~~~------~~D~vi 63 (262)
T 2rcy_A 4 NIKLGFMG-LGQMGSALAHGIANANIIKKENLF-YYGPSKK------------NTTLNYMSSNEELAR------HCDIIV 63 (262)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHHTSSCGGGEE-EECSSCC------------SSSSEECSCHHHHHH------HCSEEE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCCCCCCeEE-EEeCCcc------------cCceEEeCCHHHHHh------cCCEEE
Confidence 46999999 59999999999875431 4544 5675431 124556778888775 799999
Q ss_pred EccCchhHHHHHHHHHH--cCCcEEEeCCCCCHHHHHH
Q 031216 112 DFTDASTVYDNVKQATA--FGMRSVVYVPHIQLETVSA 147 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~--~G~~vVigttg~~~e~~~~ 147 (163)
.++.|....+.+..... .+..+|+-+.+++.+..++
T Consensus 64 ~~v~~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~ 101 (262)
T 2rcy_A 64 CAVKPDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEE 101 (262)
T ss_dssp ECSCTTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHH
Confidence 77776665555544322 3455666666888765443
No 160
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=97.87 E-value=2.8e-05 Score=66.16 Aligned_cols=100 Identities=20% Similarity=0.171 Sum_probs=63.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec--C------------CCCcchhh--hcc--CC-CCCCcceeC--C
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--H------------SVGEDIGM--VCD--ME-QPLEIPVMS--D 93 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~--~------------~~g~~~~~--l~g--~~-~~~gi~v~~--~ 93 (163)
.+||+|.| .|++||.++|.+.+++++||+++-|+ + ..|+-.++ ..+ +. ....+.++. +
T Consensus 11 ~~kv~ING-fGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~d 89 (345)
T 2b4r_O 11 ATKLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD 89 (345)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred heEEEEeC-CchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 48999999 79999999999999999999999882 1 01110000 000 00 011234443 4
Q ss_pred HHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 94 l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
++++-.. +..+|+|+++|-.....+.+...++.|.. ||+-.+
T Consensus 90 p~~~~w~---~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsap 132 (345)
T 2b4r_O 90 PSQIPWG---KCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAP 132 (345)
T ss_dssp GGGCCHH---HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred cccCccc---ccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCC
Confidence 4443210 12799999877656667888888889865 565333
No 161
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.86 E-value=9.5e-05 Score=59.61 Aligned_cols=105 Identities=12% Similarity=0.163 Sum_probs=62.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcC-CcEEEEEEecCCCCcchhhhccCCCCCCc--ceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~-~~eLvgvid~~~~g~~~~~l~g~~~~~gi--~v~~~l~ell~~~~~~~~~DVVI 111 (163)
++||+|+| +|.||+.+++.+.+.. +.++. ++|+.. .....+. ..++ ..+.++++++. ++|+||
T Consensus 6 ~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~~~~~~~------~aDvVi 71 (290)
T 3b1f_A 6 EKTIYIAG-LGLIGASLALGIKRDHPHYKIV-GYNRSD--RSRDIAL----ERGIVDEATADFKVFAA------LADVII 71 (290)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEE-EECSSH--HHHHHHH----HTTSCSEEESCTTTTGG------GCSEEE
T ss_pred cceEEEEe-eCHHHHHHHHHHHhCCCCcEEE-EEcCCH--HHHHHHH----HcCCcccccCCHHHhhc------CCCEEE
Confidence 57999999 6999999999988653 67765 566532 1122221 1232 34677777664 899999
Q ss_pred EccCchhHHHHHHHHHHc---CCcEEEeCCCCCHHHHHHHHHHhh
Q 031216 112 DFTDASTVYDNVKQATAF---GMRSVVYVPHIQLETVSALSAFCD 153 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~---G~~vVigttg~~~e~~~~L~~~A~ 153 (163)
.++.|....+.+...... .-.+|+-.++......+.|.+...
T Consensus 72 lavp~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~ 116 (290)
T 3b1f_A 72 LAVPIKKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLK 116 (290)
T ss_dssp ECSCHHHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHT
T ss_pred EcCCHHHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhcc
Confidence 777666666666554433 123444333333333355555544
No 162
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.86 E-value=8.5e-05 Score=59.16 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=55.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee----CC---HHHHHhcccccCCcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM----SD---LTMVLGSISQSKARA 108 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~----~~---l~ell~~~~~~~~~D 108 (163)
|||.|+|++|.+|+.+++.+.+.++.++.++..+... ...+. ..++.+. .| +++++ ..+|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~---~~~~~----~~~v~~~~~D~~d~~~l~~~~------~~~d 67 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEK---VPDDW----RGKVSVRQLDYFNQESMVEAF------KGMD 67 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGG---SCGGG----BTTBEEEECCTTCHHHHHHHT------TTCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHH---HHHhh----hCCCEEEEcCCCCHHHHHHHH------hCCC
Confidence 5799999999999999999887669999987664321 11111 1222221 23 34455 3899
Q ss_pred EEEEccCc--------hhHHHHHHHHHHcCCc-EE
Q 031216 109 VVIDFTDA--------STVYDNVKQATAFGMR-SV 134 (163)
Q Consensus 109 VVIDfT~p--------~~~~~~~~~al~~G~~-vV 134 (163)
+||.+..+ ......+..+.+.|+. +|
T Consensus 68 ~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv 102 (289)
T 3e48_A 68 TVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHII 102 (289)
T ss_dssp EEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEE
Confidence 99987643 2334566788888864 44
No 163
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=97.86 E-value=1.6e-05 Score=67.57 Aligned_cols=99 Identities=26% Similarity=0.220 Sum_probs=62.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-------------CCCCcchhhh--cc--CC-CCCCcceeC--CH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-------------HSVGEDIGMV--CD--ME-QPLEIPVMS--DL 94 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-------------~~~g~~~~~l--~g--~~-~~~gi~v~~--~l 94 (163)
++||+|.|+ |++||.++|.+.++++++++++-|. +..|+-.+++ .+ +. ....+.++. ++
T Consensus 2 ~ikV~InGf-GrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp 80 (342)
T 2ep7_A 2 AIKVGINGF-GRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDP 80 (342)
T ss_dssp -CEEEEECC-SHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred ceEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCCh
Confidence 379999995 9999999999998999999999874 1122100000 00 00 011244553 44
Q ss_pred HHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeC
Q 031216 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYV 137 (163)
Q Consensus 95 ~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigt 137 (163)
+++-.. +..+|+|+++|-.....+.+...++.|.. ||+-.
T Consensus 81 ~~~~w~---~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisa 121 (342)
T 2ep7_A 81 SQIPWG---DLGVDVVIEATGVFRDRENASKHLQGGAKKVIITA 121 (342)
T ss_dssp GGCCHH---HHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESS
T ss_pred hhCCcc---ccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecC
Confidence 443210 12799999877666678888999999965 45533
No 164
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=97.84 E-value=2.5e-05 Score=65.66 Aligned_cols=90 Identities=17% Similarity=0.097 Sum_probs=60.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHH--hcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeC-CHHHHHhcccccCCccEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVT--KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~--~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~-~l~ell~~~~~~~~~DVVID 112 (163)
+||+|+||+|++|+.+++.+. .+|..++..+.+.+..|..+. +. ...+.+++ +.+ . -.+|+||+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~-~~----g~~i~v~~~~~~---~-----~~~DvV~~ 67 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLA-FR----GEEIPVEPLPEG---P-----LPVDLVLA 67 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEE-ET----TEEEEEEECCSS---C-----CCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEE-Ec----CceEEEEeCChh---h-----cCCCEEEE
Confidence 589999999999999999998 788888875544433343322 10 11233332 111 1 16899996
Q ss_pred ccCchhHHHHHHHHHHcCCcEEEeCC
Q 031216 113 FTDASTVYDNVKQATAFGMRSVVYVP 138 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigtt 138 (163)
++......+.+..+++.|..+|.-..
T Consensus 68 a~g~~~s~~~a~~~~~~G~~vId~s~ 93 (331)
T 2yv3_A 68 SAGGGISRAKALVWAEGGALVVDNSS 93 (331)
T ss_dssp CSHHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CCCccchHHHHHHHHHCCCEEEECCC
Confidence 65555668899999999998776443
No 165
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.81 E-value=9.1e-05 Score=64.75 Aligned_cols=116 Identities=14% Similarity=0.113 Sum_probs=69.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||+|+| +|.||+.+++.+.+ .+.++. ++|++. .....+.......++..+.|+++++.. ..++|+||.++
T Consensus 5 ~~~IgvIG-~G~mG~~lA~~L~~-~G~~V~-v~dr~~--~~~~~l~~~~~~~gi~~~~s~~e~v~~---l~~aDvVilav 76 (474)
T 2iz1_A 5 QANFGVVG-MAVMGKNLALNVES-RGYTVA-IYNRTT--SKTEEVFKEHQDKNLVFTKTLEEFVGS---LEKPRRIMLMV 76 (474)
T ss_dssp TBSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSSH--HHHHHHHHHTTTSCEEECSSHHHHHHT---BCSSCEEEECC
T ss_pred CCcEEEEe-eHHHHHHHHHHHHh-CCCEEE-EEcCCH--HHHHHHHHhCcCCCeEEeCCHHHHHhh---ccCCCEEEEEc
Confidence 46899999 69999999999885 577754 667542 122222210001256678899998751 02599999666
Q ss_pred Cchh-HHHHHHH---HHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 115 DAST-VYDNVKQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 115 ~p~~-~~~~~~~---al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
.+.. ..+.+.. .++.|..+|...++. .....++.+..++.++.+
T Consensus 77 p~~~~v~~vl~~l~~~l~~g~iiId~s~~~-~~~~~~l~~~l~~~g~~~ 124 (474)
T 2iz1_A 77 QAGAATDATIKSLLPLLDIGDILIDGGNTH-FPDTMRRNAELADSGINF 124 (474)
T ss_dssp CTTHHHHHHHHHHGGGCCTTCEEEECSCCC-HHHHHHHHHHTTTSSCEE
T ss_pred cCchHHHHHHHHHHhhCCCCCEEEECCCCC-HHHHHHHHHHHHHCCCeE
Confidence 5433 3344332 344577666655555 344456666666655543
No 166
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=97.80 E-value=7.5e-05 Score=63.22 Aligned_cols=99 Identities=24% Similarity=0.298 Sum_probs=65.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC--------------CCCcchhhhc--c----CCCCCCccee--C
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH--------------SVGEDIGMVC--D----MEQPLEIPVM--S 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~--------------~~g~~~~~l~--g----~~~~~gi~v~--~ 92 (163)
|+||+|.| .||+||.+.|.+.+.+++++|++-|.. ..|+=.+++. + + ....+.++ .
T Consensus 1 ~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i-~Gk~I~v~~e~ 78 (332)
T 3pym_A 1 MVRVAING-FGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIV-DGKKIATYQER 78 (332)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEE-TTEEEEEECCS
T ss_pred CeEEEEEC-CCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEE-CCEEEEEEeec
Confidence 68999999 799999999999888999999998741 0121001100 0 0 01124454 3
Q ss_pred CHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
+++++-.. +..+|+|++.|-.....+.+...++.|.. ||+-.|
T Consensus 79 dp~~i~w~---~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsap 122 (332)
T 3pym_A 79 DPANLPWG---SSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAP 122 (332)
T ss_dssp SGGGSCTT---TTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSC
T ss_pred ccccCCcc---ccCccEEEEecccccCHHHHHHHHHcCCCEEEECCC
Confidence 55554331 24899999877666678888889999964 555333
No 167
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.79 E-value=2.2e-06 Score=69.49 Aligned_cols=93 Identities=9% Similarity=0.008 Sum_probs=50.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
|+||+|+| .|+||+.+++.+.+. .+++.++|++. .....+.. ..+. .+.++++++. ++|+||.++
T Consensus 2 ~m~I~iIG-~G~mG~~la~~l~~~--~~v~~v~~~~~--~~~~~~~~---~~g~-~~~~~~~~~~------~~DvVilav 66 (276)
T 2i76_A 2 SLVLNFVG-TGTLTRFFLECLKDR--YEIGYILSRSI--DRARNLAE---VYGG-KAATLEKHPE------LNGVVFVIV 66 (276)
T ss_dssp --CCEEES-CCHHHHHHHHTTC------CCCEECSSH--HHHHHHHH---HTCC-CCCSSCCCCC---------CEEECS
T ss_pred CceEEEEe-CCHHHHHHHHHHHHc--CcEEEEEeCCH--HHHHHHHH---HcCC-ccCCHHHHHh------cCCEEEEeC
Confidence 57999999 599999999988754 77766777542 11222211 2234 5667776653 789999777
Q ss_pred CchhHHHHHHHHHHcCCcEEEeCC-CCCHH
Q 031216 115 DASTVYDNVKQATAFGMRSVVYVP-HIQLE 143 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigtt-g~~~e 143 (163)
.|....+.+......+.-+| -++ +++.+
T Consensus 67 ~~~~~~~v~~~l~~~~~ivi-~~s~~~~~~ 95 (276)
T 2i76_A 67 PDRYIKTVANHLNLGDAVLV-HCSGFLSSE 95 (276)
T ss_dssp CTTTHHHHHTTTCCSSCCEE-ECCSSSCGG
T ss_pred ChHHHHHHHHHhccCCCEEE-ECCCCCcHH
Confidence 66665555543323344444 344 44443
No 168
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=97.78 E-value=0.00012 Score=62.14 Aligned_cols=100 Identities=24% Similarity=0.281 Sum_probs=65.6
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-------------CCCcchhhh------ccCCCCCCccee--
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-------------SVGEDIGMV------CDMEQPLEIPVM-- 91 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-------------~~g~~~~~l------~g~~~~~gi~v~-- 91 (163)
++++||+|.| .||+||.+.|.+.+.+++++|++-|.. ..|+=.+++ +-+ ....+.++
T Consensus 2 ~m~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i-nGk~I~v~~e 79 (338)
T 3lvf_P 2 SMAVKVAING-FGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRV-NGKEVKSFSE 79 (338)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEE-TTEEEEEECC
T ss_pred CccEEEEEEC-CCcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEE-CCEEEEEEEe
Confidence 3568999999 699999999999988999999998721 112100100 000 01124454
Q ss_pred CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeC
Q 031216 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYV 137 (163)
Q Consensus 92 ~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigt 137 (163)
.+++++-.. +..+|+|++.|-.....+.+...++.|.. ||+-.
T Consensus 80 ~dp~~i~w~---~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISa 123 (338)
T 3lvf_P 80 PDASKLPWK---DLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 123 (338)
T ss_dssp SCGGGSCTT---TTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESS
T ss_pred cccccCCcc---ccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECC
Confidence 456554331 24899999877666678888899999964 55533
No 169
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.78 E-value=0.00021 Score=56.80 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=57.1
Q ss_pred CCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCC---cc---------hhhhccCCCCCCcceeCCHHHH
Q 031216 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG---ED---------IGMVCDMEQPLEIPVMSDLTMV 97 (163)
Q Consensus 30 ~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g---~~---------~~~l~g~~~~~gi~v~~~l~el 97 (163)
......+||+|+| +|.||+.+++.+.+ .+.++. +.|++..- +. ..++.. ..+...+.+++++
T Consensus 14 ~~~~~~~kIgiIG-~G~mG~alA~~L~~-~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~e~ 87 (245)
T 3dtt_A 14 NLYFQGMKIAVLG-TGTVGRTMAGALAD-LGHEVT-IGTRDPKATLARAEPDAMGAPPFSQWLP---EHPHVHLAAFADV 87 (245)
T ss_dssp -----CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EEESCHHHHHTCC-------CCHHHHGG---GSTTCEEEEHHHH
T ss_pred ccccCCCeEEEEC-CCHHHHHHHHHHHH-CCCEEE-EEeCChhhhhhhhhhhhhcchhhhHHHh---hcCceeccCHHHH
Confidence 3344568999999 69999999999885 578876 45654210 00 122221 2233456788888
Q ss_pred HhcccccCCccEEEEccCchhHHHHHH----HHHHcCCcEEEeC
Q 031216 98 LGSISQSKARAVVIDFTDASTVYDNVK----QATAFGMRSVVYV 137 (163)
Q Consensus 98 l~~~~~~~~~DVVIDfT~p~~~~~~~~----~al~~G~~vVigt 137 (163)
+. .+|+||.+..+....+.+. ..+ .|.-+|.-+
T Consensus 88 ~~------~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 88 AA------GAELVVNATEGASSIAALTAAGAENL-AGKILVDIA 124 (245)
T ss_dssp HH------HCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECC
T ss_pred Hh------cCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECC
Confidence 75 7999997766665554443 233 566666544
No 170
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.78 E-value=0.00019 Score=62.90 Aligned_cols=113 Identities=10% Similarity=0.100 Sum_probs=67.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhcc-CCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g-~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
+||+|+| +|.||+.++..+.+ .+.++. ++|++. .....+.. .....++..+.|+++++..+ .++|+||.++
T Consensus 3 m~IgvIG-~G~mG~~lA~~La~-~G~~V~-v~dr~~--~~~~~l~~~~~~g~gi~~~~~~~e~v~~l---~~aDvVilaV 74 (482)
T 2pgd_A 3 ADIALIG-LAVMGQNLILNMND-HGFVVC-AFNRTV--SKVDDFLANEAKGTKVLGAHSLEEMVSKL---KKPRRIILLV 74 (482)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSST--HHHHHHHHTTTTTSSCEECSSHHHHHHHB---CSSCEEEECS
T ss_pred CeEEEEC-hHHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHHhccccCCCeEEeCCHHHHHhhc---cCCCEEEEeC
Confidence 6899999 69999999999875 577754 677542 22222221 00014566788999887411 3899999655
Q ss_pred Cch-hHHHHHH---HHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 115 DAS-TVYDNVK---QATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 115 ~p~-~~~~~~~---~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
.+. .+.+.+. ..++.|..+|...++.. .+..++.+..++.++
T Consensus 75 p~~~~v~~vl~~l~~~l~~g~iII~~s~~~~-~~~~~l~~~l~~~g~ 120 (482)
T 2pgd_A 75 KAGQAVDNFIEKLVPLLDIGDIIIDGGNSEY-RDTMRRCRDLKDKGI 120 (482)
T ss_dssp CTTHHHHHHHHHHHHHCCTTCEEEECSCCCH-HHHHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHHHhhcCCCCEEEECCCCCH-HHHHHHHHHHHHcCC
Confidence 443 3333333 34456776666555653 333445555555454
No 171
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=9.9e-05 Score=56.61 Aligned_cols=92 Identities=15% Similarity=0.165 Sum_probs=54.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcch-hhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDI-GMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~-~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
.|+||.|+|++|.+|+.+++.+.+ .+.+++++..+....... ..+.-. ..++.-.+++++++. ++|+||.
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~--~~Dl~d~~~~~~~~~------~~d~vi~ 73 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALN-RGFEVTAVVRHPEKIKIENEHLKVK--KADVSSLDEVCEVCK------GADAVIS 73 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHT-TTCEEEEECSCGGGCCCCCTTEEEE--CCCTTCHHHHHHHHT------TCSEEEE
T ss_pred CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEEcCcccchhccCceEEE--EecCCCHHHHHHHhc------CCCEEEE
Confidence 368999999999999999999985 578888765432110000 000000 111111133445553 7999998
Q ss_pred ccCch------------hHHHHHHHHHHcCC-cEE
Q 031216 113 FTDAS------------TVYDNVKQATAFGM-RSV 134 (163)
Q Consensus 113 fT~p~------------~~~~~~~~al~~G~-~vV 134 (163)
+..+. .....+..+.+.|+ ++|
T Consensus 74 ~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v 108 (227)
T 3dhn_A 74 AFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFL 108 (227)
T ss_dssp CCCC------CCSHHHHHHHHHHHHHHHTTCSEEE
T ss_pred eCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 76432 23456677778886 455
No 172
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.75 E-value=0.00013 Score=56.96 Aligned_cols=97 Identities=14% Similarity=0.079 Sum_probs=58.3
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
+|..++||+|+| +|+||+.+++.+.+ .+.++. ++|++. .....+. ..++.++ ++++++. ++|+|
T Consensus 24 ~~~~~~~I~iiG-~G~~G~~la~~l~~-~g~~V~-~~~r~~--~~~~~~~----~~g~~~~-~~~~~~~------~~DvV 87 (215)
T 2vns_A 24 VPDEAPKVGILG-SGDFARSLATRLVG-SGFKVV-VGSRNP--KRTARLF----PSAAQVT-FQEEAVS------SPEVI 87 (215)
T ss_dssp -----CCEEEEC-CSHHHHHHHHHHHH-TTCCEE-EEESSH--HHHHHHS----BTTSEEE-EHHHHTT------SCSEE
T ss_pred CCCCCCEEEEEc-cCHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HcCCcee-cHHHHHh------CCCEE
Confidence 344568999999 69999999999875 467766 466532 1222222 2255554 7777764 89999
Q ss_pred EEccCchhHHHH--HHHHHHcCCcEEEeCCCCCHHH
Q 031216 111 IDFTDASTVYDN--VKQATAFGMRSVVYVPHIQLET 144 (163)
Q Consensus 111 IDfT~p~~~~~~--~~~al~~G~~vVigttg~~~e~ 144 (163)
|.++.|....+. +...+ .+..+|.-+++.+.+.
T Consensus 88 i~av~~~~~~~v~~l~~~~-~~~~vv~~s~g~~~~~ 122 (215)
T 2vns_A 88 FVAVFREHYSSLCSLSDQL-AGKILVDVSNPTEQEH 122 (215)
T ss_dssp EECSCGGGSGGGGGGHHHH-TTCEEEECCCCCHHHH
T ss_pred EECCChHHHHHHHHHHHhc-CCCEEEEeCCCccccc
Confidence 977765433222 22333 6777776566775443
No 173
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=97.73 E-value=7.5e-05 Score=63.50 Aligned_cols=101 Identities=21% Similarity=0.202 Sum_probs=65.0
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-------------CCCcchhhh------ccCCCCCCccee--
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-------------SVGEDIGMV------CDMEQPLEIPVM-- 91 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-------------~~g~~~~~l------~g~~~~~gi~v~-- 91 (163)
+.|+||+|.| .||+||.+.|.+.+.+++++|++-|.. ..|+=-+++ +-+ ....+.++
T Consensus 2 ~~~~kv~ING-fGrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~i-nGk~I~v~~e 79 (345)
T 4dib_A 2 NAMTRVAING-FGRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLV-DGKMIRLLNN 79 (345)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEE-TTEEEEEECC
T ss_pred CccEEEEEEC-CCcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEE-CCEEEEEeec
Confidence 4589999999 799999999999888999999998741 011100000 000 01124454
Q ss_pred CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 92 ~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
.+++++-.. +..+|+|++.|-.....+.+...++.|.. ||+-.|
T Consensus 80 ~dp~~i~w~---~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISap 124 (345)
T 4dib_A 80 RDPKELPWT---DLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAP 124 (345)
T ss_dssp SCGGGSCTT---TTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred CChhhCCcc---ccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCC
Confidence 456554331 24899999877666667888888999964 555333
No 174
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.73 E-value=0.00037 Score=55.84 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=61.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc--EEEEEEecCCCCcchhhhccCCCCCCcc--eeCCHHHHHhcccccC-CccE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHSVGEDIGMVCDMEQPLEIP--VMSDLTMVLGSISQSK-ARAV 109 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~--eLvgvid~~~~g~~~~~l~g~~~~~gi~--v~~~l~ell~~~~~~~-~~DV 109 (163)
|+||+|+| +|.||..+++.+.+ .+. ++. ++|+.. .....+. ..|+. .++++++++ . ++|+
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~-~g~~~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~~~~~~------~~~aDv 65 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRR-SGFKGKIY-GYDINP--ESISKAV----DLGIIDEGTTSIAKVE------DFSPDF 65 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHH-TTCCSEEE-EECSCH--HHHHHHH----HTTSCSEEESCGGGGG------GTCCSE
T ss_pred CcEEEEEe-cCHHHHHHHHHHHh-cCCCcEEE-EEeCCH--HHHHHHH----HCCCcccccCCHHHHh------cCCCCE
Confidence 56899999 69999999999875 455 665 466532 1111111 12332 356777765 4 7999
Q ss_pred EEEccCchhHHHHHHHH---HHcCCcEEEeCCCCCHHHHHHHHHHhh
Q 031216 110 VIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCD 153 (163)
Q Consensus 110 VIDfT~p~~~~~~~~~a---l~~G~~vVigttg~~~e~~~~L~~~A~ 153 (163)
||.++.|....+.+... ++.+. +|+-..+......+.|.+...
T Consensus 66 Vilavp~~~~~~v~~~l~~~l~~~~-iv~~~~~~~~~~~~~l~~~l~ 111 (281)
T 2g5c_A 66 VMLSSPVRTFREIAKKLSYILSEDA-TVTDQGSVKGKLVYDLENILG 111 (281)
T ss_dssp EEECSCHHHHHHHHHHHHHHSCTTC-EEEECCSCCTHHHHHHHHHHG
T ss_pred EEEcCCHHHHHHHHHHHHhhCCCCc-EEEECCCCcHHHHHHHHHhcc
Confidence 99777776665555433 33454 444333333344455555544
No 175
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.73 E-value=8.4e-06 Score=67.58 Aligned_cols=88 Identities=15% Similarity=0.085 Sum_probs=59.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCC--cceeCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~g--i~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+..||+|+| +|.||+.+++.+.+..+++-+.++|++. ....++.. ..+ +.+++++++++. .+|+|+
T Consensus 134 ~~~~igiIG-~G~~g~~~a~~l~~~~g~~~V~v~dr~~--~~~~~l~~---~~~~~~~~~~~~~e~v~------~aDiVi 201 (312)
T 2i99_A 134 SSEVLCILG-AGVQAYSHYEIFTEQFSFKEVRIWNRTK--ENAEKFAD---TVQGEVRVCSSVQEAVA------GADVII 201 (312)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHHCCCSEEEEECSSH--HHHHHHHH---HSSSCCEECSSHHHHHT------TCSEEE
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHHhCCCcEEEEEcCCH--HHHHHHHH---HhhCCeEEeCCHHHHHh------cCCEEE
Confidence 347899999 6999999999998765776667888643 22223321 122 566789999885 799999
Q ss_pred EccCchhHHHHHH-HHHHcCCcEEE
Q 031216 112 DFTDASTVYDNVK-QATAFGMRSVV 135 (163)
Q Consensus 112 DfT~p~~~~~~~~-~al~~G~~vVi 135 (163)
.+| |.. .+.+. ..++.|.+++.
T Consensus 202 ~at-p~~-~~v~~~~~l~~g~~vi~ 224 (312)
T 2i99_A 202 TVT-LAT-EPILFGEWVKPGAHINA 224 (312)
T ss_dssp ECC-CCS-SCCBCGGGSCTTCEEEE
T ss_pred EEe-CCC-CcccCHHHcCCCcEEEe
Confidence 665 432 22221 45678888876
No 176
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.70 E-value=0.00017 Score=60.91 Aligned_cols=101 Identities=13% Similarity=0.107 Sum_probs=60.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC--------CcchhhhccCCCCCCcceeCCHHHHHhcccccC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--------GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK 105 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~--------g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~ 105 (163)
.++||+|+| .|.||..++..+.+ .+.++. +.+++.. +....-+.+..-+.++.+++|+++++.
T Consensus 28 ~~mkI~VIG-aG~mG~alA~~La~-~G~~V~-l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~------ 98 (356)
T 3k96_A 28 FKHPIAILG-AGSWGTALALVLAR-KGQKVR-LWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE------ 98 (356)
T ss_dssp CCSCEEEEC-CSHHHHHHHHHHHT-TTCCEE-EECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT------
T ss_pred cCCeEEEEC-ccHHHHHHHHHHHH-CCCeEE-EEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh------
Confidence 457999999 59999999999874 567765 4554311 110000111111224566789988874
Q ss_pred CccEEEEccCchhHHHHHHHH---HHcCCcEEEeCCCCCHH
Q 031216 106 ARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQLE 143 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigttg~~~e 143 (163)
++|+||.+..+....+.+... +..+..+|.-+.|++.+
T Consensus 99 ~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 99 GVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp TCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcC
Confidence 899999555444334444332 33466677766677654
No 177
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=97.69 E-value=0.00012 Score=56.18 Aligned_cols=86 Identities=8% Similarity=0.164 Sum_probs=53.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce----eCC-HHHHHhcccccCCccEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MSD-LTMVLGSISQSKARAVV 110 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v----~~~-l~ell~~~~~~~~~DVV 110 (163)
|||.|+|++|.+|+.+++.+.+ .+.+++++..+... ...+ .++.+ ..| .+++...+ .++|+|
T Consensus 1 M~ilItGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~---~~~~------~~~~~~~~D~~d~~~~~~~~~---~~~d~v 67 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLST-TDYQIYAGARKVEQ---VPQY------NNVKAVHFDVDWTPEEMAKQL---HGMDAI 67 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-SSCEEEEEESSGGG---SCCC------TTEEEEECCTTSCHHHHHTTT---TTCSEE
T ss_pred CeEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCccc---hhhc------CCceEEEecccCCHHHHHHHH---cCCCEE
Confidence 4899999999999999999984 58998876653211 1110 11111 123 33332221 479999
Q ss_pred EEccCc----------hhHHHHHHHHHHcCC-cEE
Q 031216 111 IDFTDA----------STVYDNVKQATAFGM-RSV 134 (163)
Q Consensus 111 IDfT~p----------~~~~~~~~~al~~G~-~vV 134 (163)
|.+... ......++.+.+.|+ ++|
T Consensus 68 i~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv 102 (219)
T 3dqp_A 68 INVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFI 102 (219)
T ss_dssp EECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEE
T ss_pred EECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEE
Confidence 987632 124567777788885 455
No 178
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.69 E-value=0.00026 Score=62.13 Aligned_cols=114 Identities=10% Similarity=0.075 Sum_probs=67.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
+.||+|+| .|.||+.+++.+.+ .+.++. +.|++. .....+.......++..+.|+++++..+ +++|+||-+.
T Consensus 15 ~~~IgvIG-lG~MG~~lA~~La~-~G~~V~-v~~r~~--~~~~~l~~~~~~~gi~~~~s~~e~v~~l---~~aDvVil~V 86 (480)
T 2zyd_A 15 KQQIGVVG-MAVMGRNLALNIES-RGYTVS-IFNRSR--EKTEEVIAENPGKKLVPYYTVKEFVESL---ETPRRILLMV 86 (480)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHT-TTCCEE-EECSSH--HHHHHHHHHSTTSCEEECSSHHHHHHTB---CSSCEEEECS
T ss_pred CCeEEEEc-cHHHHHHHHHHHHh-CCCeEE-EEeCCH--HHHHHHHhhCCCCCeEEeCCHHHHHhCC---CCCCEEEEEC
Confidence 46899999 69999999999974 578865 566542 1222222100012566778999987510 2499999555
Q ss_pred Cch-hHHHHHHHH---HHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 115 DAS-TVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 115 ~p~-~~~~~~~~a---l~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
.+. .+.+.+... ++.|.-+|..+++.. ....++.+..++.++
T Consensus 87 p~~~~v~~vl~~l~~~l~~g~iIId~s~g~~-~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 87 KAGAGTDAAIDSLKPYLDKGDIIIDGGNTFF-QDTIRRNRELSAEGF 132 (480)
T ss_dssp CSSSHHHHHHHHHGGGCCTTCEEEECSCCCH-HHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEEECCCCCH-HHHHHHHHHHHHCCC
Confidence 442 344444433 334666666666653 333445555554444
No 179
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0004 Score=61.33 Aligned_cols=113 Identities=12% Similarity=0.069 Sum_probs=67.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhcc-CCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g-~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
.||+|+| +|.||+.+++.+.+ .+.++. ++|++. ..+..+.. .....++..+.|++++... ..++|+||...
T Consensus 11 ~~IgvIG-lG~MG~~lA~~La~-~G~~V~-v~dr~~--~~~~~l~~~~~~~~gi~~~~s~~e~v~~---l~~aDvVil~V 82 (497)
T 2p4q_A 11 ADFGLIG-LAVMGQNLILNAAD-HGFTVC-AYNRTQ--SKVDHFLANEAKGKSIIGATSIEDFISK---LKRPRKVMLLV 82 (497)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSSS--HHHHHHHHTTTTTSSEECCSSHHHHHHT---SCSSCEEEECC
T ss_pred CCEEEEe-eHHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHHcccccCCCeEEeCCHHHHHhc---CCCCCEEEEEc
Confidence 4799999 69999999999875 578875 667543 22233321 1000366677899998752 12499999555
Q ss_pred Cch-hHHHHHHHH---HHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 115 DAS-TVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 115 ~p~-~~~~~~~~a---l~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
.+. .+.+.+... ++.|.-+|..+++. +....++.+..++.++
T Consensus 83 p~~~~v~~vl~~l~~~l~~g~iIId~s~~~-~~~~~~l~~~l~~~g~ 128 (497)
T 2p4q_A 83 KAGAPVDALINQIVPLLEKGDIIIDGGNSH-FPDSNRRYEELKKKGI 128 (497)
T ss_dssp CSSHHHHHHHHHHGGGCCTTCEEEECSCCC-HHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHHHHhCCCCCEEEECCCCC-hhHHHHHHHHHHHcCC
Confidence 442 344444333 33466666656555 3444555555555444
No 180
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.66 E-value=7.1e-05 Score=60.50 Aligned_cols=91 Identities=16% Similarity=0.126 Sum_probs=57.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
|+||+|+|++|+||+.+++.+.+ .+.++. ++|++. .....+. ..++.+. ++++++. ++|+||.++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~-~g~~V~-~~~r~~--~~~~~~~----~~g~~~~-~~~~~~~------~aDvVi~av 75 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHD-SAHHLA-AIEIAP--EGRDRLQ----GMGIPLT-DGDGWID------EADVVVLAL 75 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-SSSEEE-EECCSH--HHHHHHH----HTTCCCC-CSSGGGG------TCSEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-CCCEEE-EEECCH--HHHHHHH----hcCCCcC-CHHHHhc------CCCEEEEcC
Confidence 57999999449999999999875 578877 567532 1122221 1233333 5556553 899999777
Q ss_pred CchhHHHHHHHHH---HcCCcEEEeCCCC
Q 031216 115 DASTVYDNVKQAT---AFGMRSVVYVPHI 140 (163)
Q Consensus 115 ~p~~~~~~~~~al---~~G~~vVigttg~ 140 (163)
.|....+.+.... ..+.-+|..+++.
T Consensus 76 ~~~~~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 76 PDNIIEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred CchHHHHHHHHHHHhCCCCCEEEECCCCc
Confidence 7766555554433 2355555545555
No 181
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.63 E-value=0.0005 Score=54.93 Aligned_cols=99 Identities=12% Similarity=0.182 Sum_probs=61.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCc--ceeCCHHHHHhcccccCCccEEEEc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi--~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+||+|+| +|.||+.+++.+.+ .+.++.+ +|+.. .....+. ..++ .++++++++ . ++|+||.+
T Consensus 1 m~i~iiG-~G~~G~~~a~~l~~-~g~~V~~-~~~~~--~~~~~~~----~~g~~~~~~~~~~~~-~------~~D~vi~a 64 (279)
T 2f1k_A 1 MKIGVVG-LGLIGASLAGDLRR-RGHYLIG-VSRQQ--STCEKAV----ERQLVDEAGQDLSLL-Q------TAKIIFLC 64 (279)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHH----HTTSCSEEESCGGGG-T------TCSEEEEC
T ss_pred CEEEEEc-CcHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHH----hCCCCccccCCHHHh-C------CCCEEEEE
Confidence 4899999 69999999999875 5678664 56532 1122221 1233 246788777 4 89999977
Q ss_pred cCchhHHHHHHHHHH---cCCcEEEeCCCCCHHHHHHHHHH
Q 031216 114 TDASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAF 151 (163)
Q Consensus 114 T~p~~~~~~~~~al~---~G~~vVigttg~~~e~~~~L~~~ 151 (163)
+.|....+.+..... .+..+ +-+.+.+....+.+.+.
T Consensus 65 v~~~~~~~~~~~l~~~~~~~~~v-v~~~~~~~~~~~~~~~~ 104 (279)
T 2f1k_A 65 TPIQLILPTLEKLIPHLSPTAIV-TDVASVKTAIAEPASQL 104 (279)
T ss_dssp SCHHHHHHHHHHHGGGSCTTCEE-EECCSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCEE-EECCCCcHHHHHHHHHH
Confidence 776655565554432 34444 43555665555555544
No 182
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=97.63 E-value=0.00018 Score=61.17 Aligned_cols=100 Identities=22% Similarity=0.280 Sum_probs=63.7
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC--------------CCCcchhhh--cc----CCCCCCccee-
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH--------------SVGEDIGMV--CD----MEQPLEIPVM- 91 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~--------------~~g~~~~~l--~g----~~~~~gi~v~- 91 (163)
.+|+||+|.| .||+||.++|.+...+ ++++++-|+. ..|+=.+++ .+ +. ...+.++
T Consensus 5 ~~~~kvgInG-FGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~-Gk~I~v~~ 81 (346)
T 3h9e_O 5 ARELTVGING-FGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVD-NHEISVYQ 81 (346)
T ss_dssp -CCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEET-TEEEEEEC
T ss_pred CCeeEEEEEC-CChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEEC-CEEEEEEe
Confidence 4679999999 7999999999988765 9999998841 012100100 00 00 1124444
Q ss_pred -CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCC-cEEEeCC
Q 031216 92 -SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGM-RSVVYVP 138 (163)
Q Consensus 92 -~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~-~vVigtt 138 (163)
.+++++-.. +..+|+|++.|-.....+.+...++.|. .||+-.|
T Consensus 82 e~dp~~i~W~---~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsap 127 (346)
T 3h9e_O 82 CKEPKQIPWR---AVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAP 127 (346)
T ss_dssp CSSGGGCCGG---GGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSC
T ss_pred cCChhhCCcc---cccccEEEEeccccCCHHHHHHHHHcCCCEEEECCC
Confidence 345444321 2379999987766667888889999995 4666444
No 183
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.61 E-value=0.00027 Score=61.93 Aligned_cols=114 Identities=11% Similarity=0.094 Sum_probs=66.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc---cCC-CCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---DME-QPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~---g~~-~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
+||+|+| .|.||+.+++.+.+ .+.++. ++|++. .....+. |.. ...++..+.|++++...+ +++|+||
T Consensus 2 MkIgVIG-~G~mG~~lA~~La~-~G~~V~-v~dr~~--~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l---~~aDvVi 73 (478)
T 1pgj_A 2 MDVGVVG-LGVMGANLALNIAE-KGFKVA-VFNRTY--SKSEEFMKANASAPFAGNLKAFETMEAFAASL---KKPRKAL 73 (478)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSSH--HHHHHHHHHTTTSTTGGGEEECSCHHHHHHHB---CSSCEEE
T ss_pred CEEEEEC-hHHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHHHhcCCCCCCCCeEEECCHHHHHhcc---cCCCEEE
Confidence 5899999 69999999999875 577754 667532 1112221 100 011256678999887521 2599999
Q ss_pred EccCch-hHHHHHH---HHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 112 DFTDAS-TVYDNVK---QATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 112 DfT~p~-~~~~~~~---~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
.+..+. .+.+.+. ..++.|..+|...++.. ....++.+..++.++.
T Consensus 74 laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~-~~~~~l~~~l~~~g~~ 123 (478)
T 1pgj_A 74 ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHF-KDQGRRAQQLEAAGLR 123 (478)
T ss_dssp ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCH-HHHHHHHHHHHTTTCE
T ss_pred EecCChHHHHHHHHHHHhhCCCCCEEEECCCCCh-HHHHHHHHHHHHCCCe
Confidence 666543 3333333 34456776666555553 3345555555555543
No 184
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=97.61 E-value=0.00025 Score=58.37 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=30.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
|+||.|+|++|.+|+.+++.+.+.++.+++++..+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 57999999999999999999998778999877553
No 185
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=97.55 E-value=0.00011 Score=62.30 Aligned_cols=99 Identities=18% Similarity=0.189 Sum_probs=63.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC--------------CCCcchh-hh-------ccCCCCCCccee-
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH--------------SVGEDIG-MV-------CDMEQPLEIPVM- 91 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~--------------~~g~~~~-~l-------~g~~~~~gi~v~- 91 (163)
|+||+|.| .||+||.+.|.+.+.+++++|++-|.. ..|+=.+ ++ +-+. ...+.++
T Consensus 3 ~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~-Gk~I~v~~ 80 (337)
T 3v1y_O 3 KIKIGING-FGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLG-EKPVTVFG 80 (337)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEET-TEEEEEEC
T ss_pred ceEEEEEC-CChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEEC-CEEEEEEE
Confidence 68999999 799999999999988999999998741 0121111 00 0000 1124444
Q ss_pred -CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 92 -SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 92 -~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
.+++++-.. +..+|+|++.|-.....+.+...++.|.. ||+-.|
T Consensus 81 e~dp~~i~w~---~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsap 126 (337)
T 3v1y_O 81 IRNPDEIPWA---EAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp CSSGGGCCHH---HHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSC
T ss_pred ecCcccCCcc---ccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCC
Confidence 345443221 13899999877666677888888999964 555433
No 186
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=97.54 E-value=0.00028 Score=59.73 Aligned_cols=99 Identities=21% Similarity=0.226 Sum_probs=63.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhc--CCcEEEEEEecC-------------CCCcchhhh------ccCCCCCCccee--
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSH-------------SVGEDIGMV------CDMEQPLEIPVM-- 91 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~--~~~eLvgvid~~-------------~~g~~~~~l------~g~~~~~gi~v~-- 91 (163)
++||+|.| .||+||.+.|.+.+. +++++|++-|.. ..|+=.+++ +-+. ...+.++
T Consensus 2 ~~kv~ING-fGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~-Gk~I~v~~e 79 (335)
T 3doc_A 2 AVRVAING-FGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVG-YGPIKVHAV 79 (335)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEECSSEEESS-SSEEEEECC
T ss_pred CEEEEEEC-CCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEEC-CEEEEEEee
Confidence 58999999 799999999998877 789999998741 011100000 0010 1234454
Q ss_pred CCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 92 ~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
.+++++-.. +..+|+|++.|-.....+.+...++.|.. ||+-.|
T Consensus 80 ~dp~~i~w~---~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsap 124 (335)
T 3doc_A 80 RNPAELPWK---EENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAP 124 (335)
T ss_dssp SSTTSSCTT---TTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred ccccccccc---ccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCC
Confidence 345444321 24899999877666677888888999964 555433
No 187
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.53 E-value=0.00039 Score=54.12 Aligned_cols=90 Identities=12% Similarity=0.145 Sum_probs=52.5
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-------eCCHHHHHhccccc
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQS 104 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-------~~~l~ell~~~~~~ 104 (163)
+..|.+|.|+|++|.+|+.+++.+.+....+++++..+.. +..++. ..++.+ .++++++++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~---~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~----- 87 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPA---KIHKPY----PTNSQIIMGDVLNHAALKQAMQ----- 87 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG---GSCSSC----CTTEEEEECCTTCHHHHHHHHT-----
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh---hhcccc----cCCcEEEEecCCCHHHHHHHhc-----
Confidence 3457889999999999999999998543378876554321 111111 112211 123445553
Q ss_pred CCccEEEEccCchhH----HHHHHHHHHcCCc-EE
Q 031216 105 KARAVVIDFTDASTV----YDNVKQATAFGMR-SV 134 (163)
Q Consensus 105 ~~~DVVIDfT~p~~~----~~~~~~al~~G~~-vV 134 (163)
.+|+||....+... ...+..+.+.|.. +|
T Consensus 88 -~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV 121 (236)
T 3qvo_A 88 -GQDIVYANLTGEDLDIQANSVIAAMKACDVKRLI 121 (236)
T ss_dssp -TCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEE
T ss_pred -CCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEE
Confidence 78999976543322 2345566677754 54
No 188
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.53 E-value=0.0002 Score=59.66 Aligned_cols=97 Identities=13% Similarity=0.179 Sum_probs=58.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc----------cCCCCCCcceeCCHHHHHhcccccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC----------DMEQPLEIPVMSDLTMVLGSISQSK 105 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~----------g~~~~~gi~v~~~l~ell~~~~~~~ 105 (163)
+||+|+| .|.||..++..+. ..+.++. ++|++. ..+..+. +.....++.+++++++++.
T Consensus 16 ~kI~iIG-~G~mG~~la~~L~-~~G~~V~-~~~r~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 84 (366)
T 1evy_A 16 NKAVVFG-SGAFGTALAMVLS-KKCREVC-VWHMNE--EEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN------ 84 (366)
T ss_dssp EEEEEEC-CSHHHHHHHHHHT-TTEEEEE-EECSCH--HHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT------
T ss_pred CeEEEEC-CCHHHHHHHHHHH-hCCCEEE-EEECCH--HHHHHHHHcCcccccccccccccceeeeCCHHHHHc------
Confidence 3999999 5999999999987 4567765 456431 1111111 0000124556688888774
Q ss_pred CccEEEEccCchhHHHHHH-------HHHHc-CCcEEEeCCCCCHH
Q 031216 106 ARAVVIDFTDASTVYDNVK-------QATAF-GMRSVVYVPHIQLE 143 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~-------~al~~-G~~vVigttg~~~e 143 (163)
.+|+||.+..+....+.+. ..+.. +..+|.-+.|++.+
T Consensus 85 ~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~ 130 (366)
T 1evy_A 85 GAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERS 130 (366)
T ss_dssp TCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTT
T ss_pred CCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCc
Confidence 8999996665544444333 34555 77777655576554
No 189
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.49 E-value=0.0013 Score=57.98 Aligned_cols=116 Identities=11% Similarity=0.135 Sum_probs=67.9
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCC-CCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-QPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~-~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
.|+||+|+| +|.||..+++.+.+ .+.+++ +.|++. .....+.... ....+..+.+++++.+.+ .++|+||.
T Consensus 3 ~~~kIgiIG-lG~MG~~lA~~L~~-~G~~V~-v~dr~~--~~~~~l~~~g~~g~~i~~~~s~~e~v~~l---~~aDvVil 74 (484)
T 4gwg_A 3 AQADIALIG-LAVMGQNLILNMND-HGFVVC-AFNRTV--SKVDDFLANEAKGTKVVGAQSLKEMVSKL---KKPRRIIL 74 (484)
T ss_dssp CCBSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSST--HHHHHHHHTTTTTSSCEECSSHHHHHHTB---CSSCEEEE
T ss_pred CCCEEEEEC-hhHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHHhcccCCCceeccCCHHHHHhhc---cCCCEEEE
Confidence 467999999 69999999999875 578876 567543 2223332110 011233468999987621 36999985
Q ss_pred ccCch-hHHHHHHH---HHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 113 FTDAS-TVYDNVKQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 113 fT~p~-~~~~~~~~---al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
...+. .+.+.+.. .++.|.-+|-+++.. +.+..++.+..++.++-
T Consensus 75 ~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~-~~~t~~~~~~l~~~Gi~ 123 (484)
T 4gwg_A 75 LVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE-YRDTTRRCRDLKAKGIL 123 (484)
T ss_dssp CSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC-HHHHHHHHHHHHHTTCE
T ss_pred ecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC-chHHHHHHHHHHhhccc
Confidence 55443 33333333 344566666655555 33334454555555553
No 190
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.48 E-value=0.002 Score=52.48 Aligned_cols=90 Identities=13% Similarity=0.193 Sum_probs=56.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
.+.||+|+|++|.||..+++.+.+ .+.++. ++|+... .++++++. .+|+||.+
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~-~G~~V~-~~~~~~~-------------------~~~~~~~~------~aDvVila 72 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRA-SGYPIS-ILDREDW-------------------AVAESILA------NADVVIVS 72 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHT-TTCCEE-EECTTCG-------------------GGHHHHHT------TCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHh-CCCeEE-EEECCcc-------------------cCHHHHhc------CCCEEEEe
Confidence 346899999459999999999874 567765 3454320 14556653 89999977
Q ss_pred cCchhHHHHHHHHH---HcCCcEEEeCCCCCHHHHHHHHHH
Q 031216 114 TDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAF 151 (163)
Q Consensus 114 T~p~~~~~~~~~al---~~G~~vVigttg~~~e~~~~L~~~ 151 (163)
..|....+.+.... ..+. +|+-.++......+.+.+.
T Consensus 73 vp~~~~~~vl~~l~~~l~~~~-iv~~~~svk~~~~~~~~~~ 112 (298)
T 2pv7_A 73 VPINLTLETIERLKPYLTENM-LLADLTSVKREPLAKMLEV 112 (298)
T ss_dssp SCGGGHHHHHHHHGGGCCTTS-EEEECCSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCCc-EEEECCCCCcHHHHHHHHh
Confidence 76666666555443 2343 5554555555444555443
No 191
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.47 E-value=8.7e-05 Score=54.05 Aligned_cols=87 Identities=10% Similarity=0.120 Sum_probs=55.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
..||+|+| +|.||+.+++.+.. .+++ +.++++.. .+..++.... ...+..++++++++. ++|+||.+|
T Consensus 21 ~~~v~iiG-~G~iG~~~a~~l~~-~g~~-v~v~~r~~--~~~~~~a~~~-~~~~~~~~~~~~~~~------~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVG-NGMLASEIAPYFSY-PQYK-VTVAGRNI--DHVRAFAEKY-EYEYVLINDIDSLIK------NNDVIITAT 88 (144)
T ss_dssp CCEEEEEC-CSHHHHHHGGGCCT-TTCE-EEEEESCH--HHHHHHHHHH-TCEEEECSCHHHHHH------TCSEEEECS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-CCCE-EEEEcCCH--HHHHHHHHHh-CCceEeecCHHHHhc------CCCEEEEeC
Confidence 46899999 59999999998875 7899 77888643 1222222100 112234678888885 899999877
Q ss_pred CchhHHHHHHHHHHcCCcEE
Q 031216 115 DASTVYDNVKQATAFGMRSV 134 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vV 134 (163)
...... .....++.|..++
T Consensus 89 ~~~~~~-~~~~~l~~g~~vi 107 (144)
T 3oj0_A 89 SSKTPI-VEERSLMPGKLFI 107 (144)
T ss_dssp CCSSCS-BCGGGCCTTCEEE
T ss_pred CCCCcE-eeHHHcCCCCEEE
Confidence 433211 1123456677766
No 192
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=97.46 E-value=0.00041 Score=55.80 Aligned_cols=88 Identities=16% Similarity=0.216 Sum_probs=54.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCC-CCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-QPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~-~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
++||.|+|++|.+|+.+++.+.+ .+.++.++..+ . +.. . +.+.. ...++. .+++++++. ++|+||.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~-~-~~~-~-~~~~~~~~~Dl~-~~~~~~~~~------~~d~Vih~ 69 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKN-DGNTPIILTRS-I-GNK-A-INDYEYRVSDYT-LEDLINQLN------DVDAVVHL 69 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESC-C-C-------CCEEEECCCC-HHHHHHHTT------TCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCEEEEEeCC-C-Ccc-c-CCceEEEEcccc-HHHHHHhhc------CCCEEEEc
Confidence 57999999999999999999985 57888876554 2 111 1 11110 012232 344556653 89999987
Q ss_pred cCch--------------hHHHHHHHHHHcCCc-EE
Q 031216 114 TDAS--------------TVYDNVKQATAFGMR-SV 134 (163)
Q Consensus 114 T~p~--------------~~~~~~~~al~~G~~-vV 134 (163)
..+. .....+..+.+.|+. +|
T Consensus 70 a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v 105 (311)
T 3m2p_A 70 AATRGSQGKISEFHDNEILTQNLYDACYENNISNIV 105 (311)
T ss_dssp CCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 5321 224566777888876 54
No 193
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.45 E-value=0.0001 Score=61.02 Aligned_cols=98 Identities=10% Similarity=0.167 Sum_probs=58.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc--cCC-----CCCCcceeCCHHHHHhcccccCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DME-----QPLEIPVMSDLTMVLGSISQSKA 106 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~--g~~-----~~~gi~v~~~l~ell~~~~~~~~ 106 (163)
.++||+|+| .|.||..++..+.+ .+.++. +++++. ..+..+. +.. ...++.+++++++ . ..
T Consensus 13 ~~~kI~iIG-~G~mG~ala~~L~~-~G~~V~-~~~r~~--~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~------~~ 80 (335)
T 1z82_A 13 MEMRFFVLG-AGSWGTVFAQMLHE-NGEEVI-LWARRK--EIVDLINVSHTSPYVEESKITVRATNDLEE-I------KK 80 (335)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHHHHSCBTTBTTCCCCSEEESCGGG-C------CT
T ss_pred cCCcEEEEC-cCHHHHHHHHHHHh-CCCeEE-EEeCCH--HHHHHHHHhCCcccCCCCeeeEEEeCCHHH-h------cC
Confidence 568999999 59999999999874 577765 456431 1111111 100 0113566788887 5 38
Q ss_pred ccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHH
Q 031216 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLE 143 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e 143 (163)
+|+||-+..+..+.+.+......+..+|.-+.|++.+
T Consensus 81 aDvVil~vk~~~~~~v~~~l~~~~~~vv~~~nGi~~~ 117 (335)
T 1z82_A 81 EDILVIAIPVQYIREHLLRLPVKPSMVLNLSKGIEIK 117 (335)
T ss_dssp TEEEEECSCGGGHHHHHTTCSSCCSEEEECCCCCCTT
T ss_pred CCEEEEECCHHHHHHHHHHhCcCCCEEEEEeCCCCCC
Confidence 9999966655444444432211566666655576553
No 194
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=97.43 E-value=0.00022 Score=56.60 Aligned_cols=79 Identities=14% Similarity=0.160 Sum_probs=52.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||.|+|++|.+|+.+++.+.+ .+.++.++.... .++ .-.+++++++.. .++|+||.+..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~------~D~---------~d~~~~~~~~~~----~~~d~vi~~a~ 65 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP-EEYDIYPFDKKL------LDI---------TNISQVQQVVQE----IRPHIIIHCAA 65 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT-TTEEEEEECTTT------SCT---------TCHHHHHHHHHH----HCCSEEEECCC
T ss_pred eEEEEECCCCHHHHHHHHHHHh-CCCEEEEecccc------cCC---------CCHHHHHHHHHh----cCCCEEEECCc
Confidence 4999999999999999999875 588888654321 111 112355666652 37999998752
Q ss_pred chh------------------HHHHHHHHHHcCCcEE
Q 031216 116 AST------------------VYDNVKQATAFGMRSV 134 (163)
Q Consensus 116 p~~------------------~~~~~~~al~~G~~vV 134 (163)
... ....+..+.+.|.++|
T Consensus 66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v 102 (287)
T 3sc6_A 66 YTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLV 102 (287)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred ccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 211 2346677788888766
No 195
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.42 E-value=0.00021 Score=60.05 Aligned_cols=116 Identities=17% Similarity=0.198 Sum_probs=62.0
Q ss_pred ecccccccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCC-------cEEEEEEecCCC--Cc-chhhh
Q 031216 10 CRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARG-------MEVAGAIDSHSV--GE-DIGMV 79 (163)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~-------~eLvgvid~~~~--g~-~~~~l 79 (163)
-.-||.-.|. |++- +..|+||+|+| .|.||..++..+.+. + .++. +++++.. ++ ....+
T Consensus 4 ~~~~~~~~~~----~~~~----~~~~~kI~iIG-aG~mG~alA~~L~~~-G~~~~~~~~~V~-~~~r~~~~~~~~~~~~l 72 (375)
T 1yj8_A 4 HHHHHMYRNL----FDKL----KDGPLKISILG-SGNWASAISKVVGTN-AKNNYLFENEVR-MWIRDEFVNGERMVDII 72 (375)
T ss_dssp ------CCSH----HHHH----HHSCBCEEEEC-CSHHHHHHHHHHHHH-HHHCTTBCSCEE-EECCSCC---CCHHHHH
T ss_pred chhHHHHHHH----HhcC----ccCCCEEEEEC-cCHHHHHHHHHHHHc-CCccCCCCCeEE-EEECChhhhhHHHHHHH
Confidence 3446666664 4432 23467999999 599999999988753 4 5554 4554321 00 11111
Q ss_pred c----------cCCCCCCcceeCCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHH-------cCCcEEEeCCCCCH
Q 031216 80 C----------DMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATA-------FGMRSVVYVPHIQL 142 (163)
Q Consensus 80 ~----------g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~-------~G~~vVigttg~~~ 142 (163)
. +..-+.++..++|+++++. ++|+||.+..+....+.+..... .+..+|.-+.|++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~i~~~~~~~ea~~------~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~ 146 (375)
T 1yj8_A 73 NNKHENTKYLKGVPLPHNIVAHSDLASVIN------DADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIV 146 (375)
T ss_dssp HHHCBCTTTSTTCBCCTTEEEESSTHHHHT------TCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred HhcCcccccCCcccCcCCeEEECCHHHHHc------CCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence 0 1000124566788888774 89999955554444444443222 35556665557654
No 196
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.41 E-value=0.0016 Score=56.64 Aligned_cols=92 Identities=12% Similarity=0.187 Sum_probs=56.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc-cCC---------------CCCCcceeCCHHHHHh
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC-DME---------------QPLEIPVMSDLTMVLG 99 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~-g~~---------------~~~gi~v~~~l~ell~ 99 (163)
+||+|+| +|+||..++..+.+ .+.+++ ++|++. ..+..+. +.. ...++..++|+++++.
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~-~G~~V~-~~D~~~--~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~ 77 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAE-LGANVR-CIDTDR--NKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVP 77 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGG
T ss_pred CEEEEEC-cCHHHHHHHHHHHh-cCCEEE-EEECCH--HHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHh
Confidence 7999999 69999999999874 588888 567532 1111111 000 0123566789998875
Q ss_pred cccccCCccEEEEccC-ch---------hHHH---HHHHHHHcCCcEEEeCC
Q 031216 100 SISQSKARAVVIDFTD-AS---------TVYD---NVKQATAFGMRSVVYVP 138 (163)
Q Consensus 100 ~~~~~~~~DVVIDfT~-p~---------~~~~---~~~~al~~G~~vVigtt 138 (163)
++|+||.+.. |. ...+ .+...++.|.-||..+|
T Consensus 78 ------~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 78 ------EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp ------GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred ------cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 8999986542 31 2223 33344556766666554
No 197
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=97.41 E-value=0.00037 Score=55.36 Aligned_cols=85 Identities=19% Similarity=0.243 Sum_probs=53.4
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEE
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
|++...||.|+|++|.+|+.+++.+.+ .+.+++++ ++.. .++. -.+++++++.. .++|+|
T Consensus 8 ~~~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~-~r~~-----~Dl~---------d~~~~~~~~~~----~~~d~v 67 (292)
T 1vl0_A 8 HHHHHMKILITGANGQLGREIQKQLKG-KNVEVIPT-DVQD-----LDIT---------NVLAVNKFFNE----KKPNVV 67 (292)
T ss_dssp ----CEEEEEESTTSHHHHHHHHHHTT-SSEEEEEE-CTTT-----CCTT---------CHHHHHHHHHH----HCCSEE
T ss_pred cccccceEEEECCCChHHHHHHHHHHh-CCCeEEec-cCcc-----CCCC---------CHHHHHHHHHh----cCCCEE
Confidence 566789999999999999999999875 57888764 4321 1111 01345566642 279999
Q ss_pred EEccCch------------------hHHHHHHHHHHcCCcEEE
Q 031216 111 IDFTDAS------------------TVYDNVKQATAFGMRSVV 135 (163)
Q Consensus 111 IDfT~p~------------------~~~~~~~~al~~G~~vVi 135 (163)
|.+..+. .....+..+.+.|+++|.
T Consensus 68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~ 110 (292)
T 1vl0_A 68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQ 110 (292)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEE
T ss_pred EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9875321 123455667777877663
No 198
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.41 E-value=0.00018 Score=57.02 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=56.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
+||+|+| .|.||+.+++.+.+. + .++ .++|++. .....+.. ..++.+++++++++ ++|+||.++
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~-g~~~v-~~~~r~~--~~~~~~~~---~~g~~~~~~~~~~~-------~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLG-GGNMAAAVAGGLVKQ-GGYRI-YIANRGA--EKRERLEK---ELGVETSATLPELH-------SDDVLILAV 65 (263)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHH-CSCEE-EEECSSH--HHHHHHHH---HTCCEEESSCCCCC-------TTSEEEECS
T ss_pred CEEEEEC-chHHHHHHHHHHHHC-CCCeE-EEECCCH--HHHHHHHH---hcCCEEeCCHHHHh-------cCCEEEEEe
Confidence 5899999 599999999998754 5 555 4667542 12222211 23556666665432 579988666
Q ss_pred CchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhh
Q 031216 115 DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~ 153 (163)
.|....+.+......+..+|.-+.+++.+ .|.+...
T Consensus 66 ~~~~~~~v~~~l~~~~~ivv~~~~g~~~~---~l~~~~~ 101 (263)
T 1yqg_A 66 KPQDMEAACKNIRTNGALVLSVAAGLSVG---TLSRYLG 101 (263)
T ss_dssp CHHHHHHHHTTCCCTTCEEEECCTTCCHH---HHHHHTT
T ss_pred CchhHHHHHHHhccCCCEEEEecCCCCHH---HHHHHcC
Confidence 65444444432211244444433577763 3444443
No 199
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=97.39 E-value=0.0019 Score=52.45 Aligned_cols=35 Identities=11% Similarity=0.210 Sum_probs=28.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid 68 (163)
.++||.|+|++|.+|+.+++.+.+. ...++++...
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 4689999999999999999999865 2478776544
No 200
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=97.32 E-value=0.00072 Score=55.35 Aligned_cols=95 Identities=16% Similarity=0.136 Sum_probs=57.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCC-cchhhhccCCCCCCcce-------eCCHHHHHhcccccCC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG-EDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKA 106 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g-~~~~~l~g~~~~~gi~v-------~~~l~ell~~~~~~~~ 106 (163)
++||.|+|++|.+|+.+++.+.+. +.++.++..+.... .....+..+. ..++.+ .+++++++.. .+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~----~~ 83 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA-HRPTYILARPGPRSPSKAKIFKALE-DKGAIIVYGLINEQEAMEKILKE----HE 83 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHHH----TT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEECCCCCChhHHHHHHHHH-hCCcEEEEeecCCHHHHHHHHhh----CC
Confidence 468999999999999999999865 68888766543110 0111000000 112222 1234455542 48
Q ss_pred ccEEEEccCc---hhHHHHHHHHHHcC-CcEEE
Q 031216 107 RAVVIDFTDA---STVYDNVKQATAFG-MRSVV 135 (163)
Q Consensus 107 ~DVVIDfT~p---~~~~~~~~~al~~G-~~vVi 135 (163)
+|+||.+..+ ......+..|.+.| +..++
T Consensus 84 ~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 84 IDIVVSTVGGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred CCEEEECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence 9999987644 34467778888888 77665
No 201
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=97.32 E-value=0.00062 Score=55.94 Aligned_cols=95 Identities=15% Similarity=0.095 Sum_probs=57.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC-CcchhhhccCC--C-----CCCc-ceeCCHHHHHhcccccC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV-GEDIGMVCDME--Q-----PLEI-PVMSDLTMVLGSISQSK 105 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~-g~~~~~l~g~~--~-----~~gi-~v~~~l~ell~~~~~~~ 105 (163)
++||+|+| .|.||..++..+.+ .+.++. ++|+... -..+.+..+.. . ...+ .+++++++++.
T Consensus 4 ~mki~iiG-~G~~G~~~a~~L~~-~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 74 (359)
T 1bg6_A 4 SKTYAVLG-LGNGGHAFAAYLAL-KGQSVL-AWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK------ 74 (359)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT------
T ss_pred cCeEEEEC-CCHHHHHHHHHHHh-CCCEEE-EEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHh------
Confidence 37999999 59999999998874 578865 5665321 01111100100 0 0112 35678888774
Q ss_pred CccEEEEccCchhHHHHHHHH---HHcCCcEEEeCCC
Q 031216 106 ARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPH 139 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigttg 139 (163)
++|+||.++.+....+.+... +..+..+|.. .+
T Consensus 75 ~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~-~~ 110 (359)
T 1bg6_A 75 DADVILIVVPAIHHASIAANIASYISEGQLIILN-PG 110 (359)
T ss_dssp TCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES-SC
T ss_pred cCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc-CC
Confidence 899999676665555555443 3456667665 44
No 202
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.31 E-value=0.002 Score=56.15 Aligned_cols=108 Identities=13% Similarity=0.155 Sum_probs=63.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCC----------------CCCCcceeCCHHHH
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME----------------QPLEIPVMSDLTMV 97 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~----------------~~~gi~v~~~l~el 97 (163)
+.+||+|+| +|+||..++..+. ..|.++++ +|++. ..+..+.... .+.++.+++|++++
T Consensus 7 ~~~~~~vIG-lG~vG~~~A~~La-~~G~~V~~-~D~~~--~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea 81 (446)
T 4a7p_A 7 GSVRIAMIG-TGYVGLVSGACFS-DFGHEVVC-VDKDA--RKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEG 81 (446)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSCS--TTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHH
T ss_pred CceEEEEEc-CCHHHHHHHHHHH-HCCCEEEE-EeCCH--HHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHH
Confidence 448999999 7999999999887 46888885 56432 1122211100 01235667899888
Q ss_pred HhcccccCCccEEEEcc-Cch----------hHHHHHH---HHHHcCCcEEEeCCCCCHHHHHHHHHHhh
Q 031216 98 LGSISQSKARAVVIDFT-DAS----------TVYDNVK---QATAFGMRSVVYVPHIQLETVSALSAFCD 153 (163)
Q Consensus 98 l~~~~~~~~~DVVIDfT-~p~----------~~~~~~~---~al~~G~~vVigttg~~~e~~~~L~~~A~ 153 (163)
+. .+|++|.+- +|. .+.+.+. ..++.|.-||..+ +..+...+++.+..+
T Consensus 82 ~~------~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~ 144 (446)
T 4a7p_A 82 VK------DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIA 144 (446)
T ss_dssp HT------TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHH
T ss_pred Hh------cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHH
Confidence 75 899988652 332 1333332 3344566666644 444444444444433
No 203
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.31 E-value=0.0011 Score=53.60 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=58.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCC-cchhhh--------c----cCCC------CCCcceeCCHH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG-EDIGMV--------C----DMEQ------PLEIPVMSDLT 95 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g-~~~~~l--------~----g~~~------~~gi~v~~~l~ 95 (163)
+.||+|+| .|.||+.+++.+. ..+++++. +|++... ....+. . ++.. ...+...++++
T Consensus 4 ~~kV~VIG-aG~mG~~iA~~la-~~G~~V~l-~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLG-TGVLGSQIAFQTA-FHGFAVTA-YDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA 80 (283)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-hCCCeEEE-EeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence 46899999 5999999999987 45888774 6753210 001110 0 0000 01245578888
Q ss_pred HHHhcccccCCccEEEEccCch--hHHHH---HHHHHHcCCcEEEeCCCCCHHHH
Q 031216 96 MVLGSISQSKARAVVIDFTDAS--TVYDN---VKQATAFGMRSVVYVPHIQLETV 145 (163)
Q Consensus 96 ell~~~~~~~~~DVVIDfT~p~--~~~~~---~~~al~~G~~vVigttg~~~e~~ 145 (163)
+++. ++|+||.+..++ ...+. +...+..+.-++.-|++++.++.
T Consensus 81 ~~~~------~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~l 129 (283)
T 4e12_A 81 QAVK------DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDL 129 (283)
T ss_dssp HHTT------TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHhc------cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHH
Confidence 8874 899999766443 22222 23333444444444557765543
No 204
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.30 E-value=0.001 Score=49.68 Aligned_cols=85 Identities=21% Similarity=0.259 Sum_probs=52.0
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-------eCCHHHHHhcccccCCcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKARA 108 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-------~~~l~ell~~~~~~~~~D 108 (163)
+||.|+|++|.+|+.+++.+.+ .+.+++++..+... ...+. ..++.+ .++++++++ ++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-~g~~V~~~~r~~~~---~~~~~----~~~~~~~~~D~~~~~~~~~~~~------~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-AGYEVTVLVRDSSR---LPSEG----PRPAHVVVGDVLQAADVDKTVA------GQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEEESCGGG---SCSSS----CCCSEEEESCTTSHHHHHHHHT------TCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEeChhh---ccccc----CCceEEEEecCCCHHHHHHHHc------CCC
Confidence 6899999999999999999986 47898876543211 11110 111211 123445553 799
Q ss_pred EEEEccCch-----------hHHHHHHHHHHcCC-cEE
Q 031216 109 VVIDFTDAS-----------TVYDNVKQATAFGM-RSV 134 (163)
Q Consensus 109 VVIDfT~p~-----------~~~~~~~~al~~G~-~vV 134 (163)
+||.+..+. .....++.+.+.+. ++|
T Consensus 70 ~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v 107 (206)
T 1hdo_A 70 AVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVV 107 (206)
T ss_dssp EEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEE
Confidence 999876322 23455666777775 444
No 205
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.27 E-value=0.00084 Score=51.10 Aligned_cols=87 Identities=17% Similarity=0.173 Sum_probs=53.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-eCCHH----HHHhcccccCCccEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLT----MVLGSISQSKARAVV 110 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-~~~l~----ell~~~~~~~~~DVV 110 (163)
|||.|+|++|.+|+.+++.+.+ .+.+++++..+. .+..++. ..++.+ ..|+. +++ ..+|+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~---~~~~~~~----~~~~~~~~~D~~d~~~~~~------~~~d~v 66 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARR-RGHEVLAVVRDP---QKAADRL----GATVATLVKEPLVLTEADL------DSVDAV 66 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCH---HHHHHHT----CTTSEEEECCGGGCCHHHH------TTCSEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHH-CCCEEEEEEecc---ccccccc----CCCceEEecccccccHhhc------ccCCEE
Confidence 5899999999999999999985 488988765432 1122221 112221 12221 444 489999
Q ss_pred EEccCc-----------hhHHHHHHHHHHcCCcEEEe
Q 031216 111 IDFTDA-----------STVYDNVKQATAFGMRSVVY 136 (163)
Q Consensus 111 IDfT~p-----------~~~~~~~~~al~~G~~vVig 136 (163)
|.+..+ ......+..+.+.|.++|.-
T Consensus 67 i~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 67 VDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp EECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred EECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 987633 12234455666777777643
No 206
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=97.26 E-value=0.0029 Score=55.32 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=46.4
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhcc-C---C-----------CCCCcceeCCHH
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCD-M---E-----------QPLEIPVMSDLT 95 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid~~~~g~~~~~l~g-~---~-----------~~~gi~v~~~l~ 95 (163)
+.+|+||+|+| +|+||..++..+.+. ++.++++ +|++. ..+..+.. . . ...++..+++++
T Consensus 6 ~~~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~-~D~~~--~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~ 81 (481)
T 2o3j_A 6 FGKVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTV-VDMNT--AKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIP 81 (481)
T ss_dssp SCCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEE-ECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEE-EECCH--HHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHH
Confidence 34568999999 699999999998876 3788875 56431 11111110 0 0 011345667887
Q ss_pred HHHhcccccCCccEEEEcc
Q 031216 96 MVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 96 ell~~~~~~~~~DVVIDfT 114 (163)
+++. .+|+||.+.
T Consensus 82 ~~~~------~aDvvii~V 94 (481)
T 2o3j_A 82 KAIA------EADLIFISV 94 (481)
T ss_dssp HHHH------HCSEEEECC
T ss_pred HHhh------cCCEEEEec
Confidence 7775 799998663
No 207
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.25 E-value=0.00097 Score=51.56 Aligned_cols=89 Identities=12% Similarity=0.253 Sum_probs=54.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhcc--C-C-CCCCcceeCCHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD--M-E-QPLEIPVMSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g--~-~-~~~gi~v~~~l~ell~~~~~~~~~DVV 110 (163)
.+||.|+|++|.+|+.+++.+.+ .+.+++++..+.. +..++.. . . ...++. +++.+++. ++|+|
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~-~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~Dl~--~~~~~~~~------~~D~v 88 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKN-KGHEPVAMVRNEE---QGPELRERGASDIVVANLE--EDFSHAFA------SIDAV 88 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSGG---GHHHHHHTTCSEEEECCTT--SCCGGGGT------TCSEE
T ss_pred CCeEEEECCCChHHHHHHHHHHh-CCCeEEEEECChH---HHHHHHhCCCceEEEcccH--HHHHHHHc------CCCEE
Confidence 47899999999999999999985 5889887654321 1222110 0 0 011121 45556653 89999
Q ss_pred EEccCch--------------hHHHHHHHHHHcCC-cEEE
Q 031216 111 IDFTDAS--------------TVYDNVKQATAFGM-RSVV 135 (163)
Q Consensus 111 IDfT~p~--------------~~~~~~~~al~~G~-~vVi 135 (163)
|....+. .....++.+.+.|. ++|.
T Consensus 89 i~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~ 128 (236)
T 3e8x_A 89 VFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIM 128 (236)
T ss_dssp EECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEE
T ss_pred EECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEE
Confidence 9875321 13445667777774 4543
No 208
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=97.25 E-value=0.0012 Score=53.34 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=28.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
++||.|+|++|.+|+.+++.+.+ .+.+++++..+
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRA-AGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEECT
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEecC
Confidence 46999999999999999999985 57898876543
No 209
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=97.25 E-value=0.00082 Score=54.15 Aligned_cols=95 Identities=17% Similarity=0.180 Sum_probs=56.4
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCc---chhhhccCCCCCCcce----eC---CHHHHHhccc
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGE---DIGMVCDMEQPLEIPV----MS---DLTMVLGSIS 102 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~---~~~~l~g~~~~~gi~v----~~---~l~ell~~~~ 102 (163)
++|++|.|+|++|.+|+.+++.+.+ .+.++.++..+...+. ....+..+. ..++.+ ++ ++++++.
T Consensus 2 ~~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~l~~~~-~~~v~~v~~D~~d~~~l~~a~~--- 76 (321)
T 3c1o_A 2 SHMEKIIIYGGTGYIGKFMVRASLS-FSHPTFIYARPLTPDSTPSSVQLREEFR-SMGVTIIEGEMEEHEKMVSVLK--- 76 (321)
T ss_dssp --CCCEEEETTTSTTHHHHHHHHHH-TTCCEEEEECCCCTTCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHT---
T ss_pred CcccEEEEEcCCchhHHHHHHHHHh-CCCcEEEEECCcccccChHHHHHHHHhh-cCCcEEEEecCCCHHHHHHHHc---
Confidence 3567899999999999999999986 4788886654320110 111100000 112221 12 3445553
Q ss_pred ccCCccEEEEccCc---hhHHHHHHHHHHcC-CcEEE
Q 031216 103 QSKARAVVIDFTDA---STVYDNVKQATAFG-MRSVV 135 (163)
Q Consensus 103 ~~~~~DVVIDfT~p---~~~~~~~~~al~~G-~~vVi 135 (163)
.+|+||.++.+ ......+..+.+.| +.-++
T Consensus 77 ---~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 77 ---QVDIVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp ---TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred ---CCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 79999987754 33466778888888 65444
No 210
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=97.25 E-value=0.00038 Score=58.12 Aligned_cols=90 Identities=18% Similarity=0.118 Sum_probs=56.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
.+||+|+| +|.||+.+++.+.. .+++++ +.++... ...+... ..|+.++ ++++++. .+|+||.++
T Consensus 16 ~~~I~IIG-~G~mG~alA~~L~~-~G~~V~-~~~~~~~--~~~~~a~---~~G~~~~-~~~e~~~------~aDvVilav 80 (338)
T 1np3_A 16 GKKVAIIG-YGSQGHAHACNLKD-SGVDVT-VGLRSGS--ATVAKAE---AHGLKVA-DVKTAVA------AADVVMILT 80 (338)
T ss_dssp TSCEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECCTTC--HHHHHHH---HTTCEEE-CHHHHHH------TCSEEEECS
T ss_pred CCEEEEEC-chHHHHHHHHHHHH-CcCEEE-EEECChH--HHHHHHH---HCCCEEc-cHHHHHh------cCCEEEEeC
Confidence 46899999 69999999999875 567766 4554321 1111110 2355555 8888775 899999777
Q ss_pred CchhHHHHHH-H---HHHcCCcEEEeCCCC
Q 031216 115 DASTVYDNVK-Q---ATAFGMRSVVYVPHI 140 (163)
Q Consensus 115 ~p~~~~~~~~-~---al~~G~~vVigttg~ 140 (163)
+|....+.+. . .++.|..++. ..|+
T Consensus 81 p~~~~~~v~~~~i~~~l~~~~ivi~-~~gv 109 (338)
T 1np3_A 81 PDEFQGRLYKEEIEPNLKKGATLAF-AHGF 109 (338)
T ss_dssp CHHHHHHHHHHHTGGGCCTTCEEEE-SCCH
T ss_pred CcHHHHHHHHHHHHhhCCCCCEEEE-cCCc
Confidence 6666555554 2 2334554443 3443
No 211
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=97.25 E-value=0.001 Score=53.63 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=55.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCC-cchhhhccCCCCCCcce----eC---CHHHHHhcccccCC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG-EDIGMVCDMEQPLEIPV----MS---DLTMVLGSISQSKA 106 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g-~~~~~l~g~~~~~gi~v----~~---~l~ell~~~~~~~~ 106 (163)
|.||.|+|++|.+|+.+++.+.+. +.++.++..+.... ....++. ..++.+ ++ ++++++. .
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~a~~------~ 79 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNSSKTTLLDEFQ----SLGAIIVKGELDEHEKLVELMK------K 79 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTCSCHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT------T
T ss_pred CCeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCCchhhHHHHhh----cCCCEEEEecCCCHHHHHHHHc------C
Confidence 358999999999999999999864 78888665432210 0011111 112221 12 3445553 7
Q ss_pred ccEEEEccCch---hHHHHHHHHHHcC-CcEEE
Q 031216 107 RAVVIDFTDAS---TVYDNVKQATAFG-MRSVV 135 (163)
Q Consensus 107 ~DVVIDfT~p~---~~~~~~~~al~~G-~~vVi 135 (163)
+|+||.++.+. .....+..+.+.| +.-++
T Consensus 80 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 80 VDVVISALAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp CSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred CCEEEECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 99999877543 3456677788888 65555
No 212
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.0016 Score=56.15 Aligned_cols=122 Identities=16% Similarity=0.149 Sum_probs=61.1
Q ss_pred cccccccccccceeee---ccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCC-------cEEEEEEecCC--CCcchhh
Q 031216 11 RMHHISQNVKAKRFIS---CSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARG-------MEVAGAIDSHS--VGEDIGM 78 (163)
Q Consensus 11 ~~~~~~~~~~~~~~~~---~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~-------~eLvgvid~~~--~g~~~~~ 78 (163)
|.-+.++.+.++|--+ ++-..+.+|+||+|+| .|.+|..++..+.+... .++. +..++. .++...+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~KI~ViG-aGsWGTALA~~la~ng~~~~~~~~~~V~-lw~r~~e~~~~~~~e 84 (391)
T 4fgw_A 7 RLNLTSGHLNAGRKRSSSSVSLKAAEKPFKVTVIG-SGNWGTTIAKVVAENCKGYPEVFAPIVQ-MWVFEEEINGEKLTE 84 (391)
T ss_dssp --------------------------CCEEEEEEC-CSHHHHHHHHHHHHHHHHCTTTEEEEEE-EECCCCBSSSCBHHH
T ss_pred HHHHHhhhhccccccccccccccccCCCCeEEEEC-cCHHHHHHHHHHHHcCCCccccCCceEE-EEEcchHhhhHHHHH
Confidence 3444466665544332 2223344789999999 59999999998875311 1222 222211 1111111
Q ss_pred -----------hccCCCCCCcceeCCHHHHHhcccccCCccEEEEccCchhH-HHHHHHH---HHcCCcEEEeCCCCC
Q 031216 79 -----------VCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTV-YDNVKQA---TAFGMRSVVYVPHIQ 141 (163)
Q Consensus 79 -----------l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~a---l~~G~~vVigttg~~ 141 (163)
+.+..-+.++.+++|+++++. ..|+|| +..|... .+.+... +..+.++|..+-|+.
T Consensus 85 ~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al~------~ad~ii-~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 85 IINTRHQNVKYLPGITLPDNLVANPDLIDSVK------DVDIIV-FNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp HHTTTCCBTTTBTTCCCCSSEEEESCHHHHHT------TCSEEE-ECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred HHHhcCcCcccCCCCcCCCCcEEeCCHHHHHh------cCCEEE-EECChhhhHHHHHHhccccCCCceeEEeccccc
Confidence 112222456778899999985 899988 6666555 3444433 456778888777874
No 213
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.23 E-value=0.0007 Score=54.65 Aligned_cols=106 Identities=11% Similarity=0.138 Sum_probs=58.8
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcC----C-cEEEEEEecCCCCcchhhhc---cCC--C------CCCcceeCCHHH
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKAR----G-MEVAGAIDSHSVGEDIGMVC---DME--Q------PLEIPVMSDLTM 96 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~----~-~eLvgvid~~~~g~~~~~l~---g~~--~------~~gi~v~~~l~e 96 (163)
+.|+||+|+| .|.||..++..+.+.+ + .++. ++++. .....+. |.. . ...+.++++.++
T Consensus 6 ~~~m~I~iiG-~G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r~---~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 80 (317)
T 2qyt_A 6 QQPIKIAVFG-LGGVGGYYGAMLALRAAATDGLLEVS-WIARG---AHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAE 80 (317)
T ss_dssp -CCEEEEEEC-CSHHHHHHHHHHHHHHHHTTSSEEEE-EECCH---HHHHHHHHHTSEEEECSSCEEEECCSEEESCHHH
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHhCccccCCCCCEE-EEEcH---HHHHHHHhcCCeEEEeCCCCeEEecceEecCccc
Confidence 4568999999 5999999999987651 6 6766 44542 1111111 100 0 011223345543
Q ss_pred HHhcccccCCccEEEEccCchhHHHHHHHH---HHcCCcEEEeCCCCCHHHHHHHHHHh
Q 031216 97 VLGSISQSKARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFC 152 (163)
Q Consensus 97 ll~~~~~~~~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigttg~~~e~~~~L~~~A 152 (163)
. .++|+||-++.+....+.+... +..+..+|.-+.|++.+ +.|.+..
T Consensus 81 -~------~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~--~~l~~~l 130 (317)
T 2qyt_A 81 -V------GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIA--ERMRTYL 130 (317)
T ss_dssp -H------CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHH--HHHTTTS
T ss_pred -c------CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcH--HHHHHHC
Confidence 3 3899999666666555544433 22355566656687643 3344443
No 214
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.23 E-value=0.00078 Score=54.05 Aligned_cols=111 Identities=15% Similarity=0.208 Sum_probs=57.0
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc--cCC--C-----CCCcceeCCHHHHHhccccc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DME--Q-----PLEIPVMSDLTMVLGSISQS 104 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~--g~~--~-----~~gi~v~~~l~ell~~~~~~ 104 (163)
+|+||+|+| .|.||..++..+.+ .+.++.. +|++. .....+. +.. . ...+.++ +.+++... -
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~-~g~~V~~-~~r~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~---~ 72 (316)
T 2ew2_A 2 NAMKIAIAG-AGAMGSRLGIMLHQ-GGNDVTL-IDQWP--AHIEAIRKNGLIADFNGEEVVANLPIF-SPEEIDHQ---N 72 (316)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHHHHCEEEEETTEEEEECCCEE-CGGGCCTT---S
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHh-CCCcEEE-EECCH--HHHHHHHhCCEEEEeCCCeeEecceee-cchhhccc---C
Confidence 467999999 59999999999874 5778764 56431 1111111 100 0 0011122 22232210 0
Q ss_pred CCccEEEEccCchhHHHHHHHHH---HcCCcEEEeCCCCCHHHHHHHHHHhhhc
Q 031216 105 KARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFCDKA 155 (163)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al---~~G~~vVigttg~~~e~~~~L~~~A~~~ 155 (163)
.++|+||.++.+....+.+.... ..+..+|.-++|++. .+.|.+...+.
T Consensus 73 ~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~--~~~l~~~~~~~ 124 (316)
T 2ew2_A 73 EQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGH--EDVLEKYVPKE 124 (316)
T ss_dssp CCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCT--HHHHTTTSCGG
T ss_pred CCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCc--HHHHHHHcCCc
Confidence 27999996666555444444332 335566665567753 23344444333
No 215
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=97.23 E-value=0.0017 Score=55.91 Aligned_cols=114 Identities=14% Similarity=0.134 Sum_probs=70.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEe-cCCCC---cchhhhcc----CCC-----CCCccee---CCHHHH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAID-SHSVG---EDIGMVCD----MEQ-----PLEIPVM---SDLTMV 97 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid-~~~~g---~~~~~l~g----~~~-----~~gi~v~---~~l~el 97 (163)
|.||.|.|++|-+|+..+..+.++|+ ++++++.. .+... +.+.++-. +.. ..++.++ +.+.++
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~G~~~l~~~ 100 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDAATRL 100 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEESTTHHHHH
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEecHHHHHHH
Confidence 78899999999999999999999987 99999988 43210 11111100 000 0011222 123333
Q ss_pred HhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHH----HHHHHHhhhcC
Q 031216 98 LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV----SALSAFCDKAS 156 (163)
Q Consensus 98 l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~----~~L~~~A~~~~ 156 (163)
.. ..++|+|+..-.=.....-...|+++|+.+-... .|.+ +.+.+++++.+
T Consensus 101 a~----~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLAN----KEsLV~aG~lv~~~a~~~~ 155 (398)
T 2y1e_A 101 VE----QTEADVVLNALVGALGLRPTLAALKTGARLALAN----KESLVAGGSLVLRAARPGQ 155 (398)
T ss_dssp HH----HSCCSEEEECCCSGGGHHHHHHHHHHTCEEEECC----HHHHHHHTHHHHHHCCTTC
T ss_pred hc----CCCCCEEEEeCcCHHHHHHHHHHHHCCCceEEcc----cchheecHHHHHHHHHHcC
Confidence 33 2579999955555555677788999999998743 3332 34455566555
No 216
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=97.21 E-value=0.00069 Score=54.04 Aligned_cols=93 Identities=19% Similarity=0.266 Sum_probs=55.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcc----hhhhccCCCCCCcce----eCC---HHHHHhcccc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED----IGMVCDMEQPLEIPV----MSD---LTMVLGSISQ 103 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~----~~~l~g~~~~~gi~v----~~~---l~ell~~~~~ 103 (163)
|.||.|+|++|.+|+.+++.+.+. +.++.++..+...+.+ ...+..+. ..++.+ ++| +++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~---- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-GNPTYALVRKTITAANPETKEELIDNYQ-SLGVILLEGDINDHETLVKAIK---- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCSCCSSCHHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHT----
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-CCcEEEEECCCcccCChHHHHHHHHHHH-hCCCEEEEeCCCCHHHHHHHHh----
Confidence 578999999999999999999864 6788765543211111 11100000 112221 123 345553
Q ss_pred cCCccEEEEccCc---hhHHHHHHHHHHcC-CcEEE
Q 031216 104 SKARAVVIDFTDA---STVYDNVKQATAFG-MRSVV 135 (163)
Q Consensus 104 ~~~~DVVIDfT~p---~~~~~~~~~al~~G-~~vVi 135 (163)
.+|+||.+..+ ......+..+.+.| +.-++
T Consensus 76 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 76 --QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp --TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred --CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 79999987643 34456777888888 65554
No 217
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=97.20 E-value=0.00081 Score=51.69 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=30.0
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcC-CcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~-~~eLvgvid 68 (163)
.+.+|.|+|++|.+|+.+++.+.+.. +.+++++..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 46789999999999999999998765 899887654
No 218
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=97.19 E-value=0.00082 Score=52.94 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=51.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhccCCCCCCcce-------eCCHHHHHhcccccCCcc
Q 031216 37 KVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKARA 108 (163)
Q Consensus 37 rV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-------~~~l~ell~~~~~~~~~D 108 (163)
||.|+|++|.+|+.+++.+.+. ++.+++++..+... ...+.. .++.+ .+++++++ ..+|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~---~~~~~~----~~~~~~~~D~~d~~~~~~~~------~~~d 67 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK---AQALAA----QGITVRQADYGDEAALTSAL------QGVE 67 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT---CHHHHH----TTCEEEECCTTCHHHHHHHT------TTCS
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh---hhhhhc----CCCeEEEcCCCCHHHHHHHH------hCCC
Confidence 5899999999999999999865 48898876543221 111110 11111 12344455 3789
Q ss_pred EEEEccCc------hhHHHHHHHHHHcCC-cEE
Q 031216 109 VVIDFTDA------STVYDNVKQATAFGM-RSV 134 (163)
Q Consensus 109 VVIDfT~p------~~~~~~~~~al~~G~-~vV 134 (163)
+||.++.+ ......+..+.+.|+ ++|
T Consensus 68 ~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v 100 (286)
T 2zcu_A 68 KLLLISSSEVGQRAPQHRNVINAAKAAGVKFIA 100 (286)
T ss_dssp EEEECC--------CHHHHHHHHHHHHTCCEEE
T ss_pred EEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 99987643 233456677777785 444
No 219
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=97.18 E-value=0.0032 Score=51.03 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=29.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcC-CcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~-~~eLvgvid 68 (163)
|++|.|+|++|.+|+.+++.+.+.. +.+++++..
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 6799999999999999999988753 789887644
No 220
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=97.17 E-value=0.0032 Score=51.66 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=30.3
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid 68 (163)
.+++|.|+|++|.+|+.+++.+.+. .+.+++++..
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 4579999999999999999999864 7999997654
No 221
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=97.17 E-value=0.0004 Score=59.31 Aligned_cols=97 Identities=23% Similarity=0.137 Sum_probs=61.1
Q ss_pred CeeEEEEcCCCHHHHHHHHH----HHhcCCcEEEEEEecC--------------CCCcchhhh--------------ccC
Q 031216 35 NIKVIINGAVKEIGRAAVIA----VTKARGMEVAGAIDSH--------------SVGEDIGMV--------------CDM 82 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~----i~~~~~~eLvgvid~~--------------~~g~~~~~l--------------~g~ 82 (163)
++||+|.| .||+||.+.|. +.+.+++++|++-|+. ..|+=-+++ +-+
T Consensus 2 ~~kv~ING-FGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEEC-TTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEEC-CChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 58999999 79999999998 6667899999998831 011100000 000
Q ss_pred CCCCCcceeC---CHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCc-EEEe
Q 031216 83 EQPLEIPVMS---DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (163)
Q Consensus 83 ~~~~gi~v~~---~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVig 136 (163)
. ...+.++. +++++-.. +..+|+|++.|--....+.+...++.|.. ||+-
T Consensus 81 n-Gk~I~v~~~e~dp~~i~w~---~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViIS 134 (359)
T 3ids_C 81 N-GHRILCVKAQRNPADLPWG---KLGVEYVIESTGLFTAKAAAEGHLRGGARKVVIS 134 (359)
T ss_dssp T-TEEEEECCCCSSTTTSCHH---HHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEES
T ss_pred C-CEEEEEEEccCCcccCCcc---ccCccEEEEeccccCCHHHHHHHHHcCCCEEEEC
Confidence 0 11244543 44432210 13799999877666667888888899964 5553
No 222
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=97.17 E-value=0.00012 Score=62.43 Aligned_cols=102 Identities=21% Similarity=0.248 Sum_probs=58.6
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC-------------CCc------chhhhccCCCCCCcceeC
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-------------VGE------DIGMVCDMEQPLEIPVMS 92 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~-------------~g~------~~~~l~g~~~~~gi~v~~ 92 (163)
..+++||+|.|+ |++||.+.|.+.+. +++++++-|... .|+ -.+..+-+. ...+.++.
T Consensus 18 ~~~~~kVaInGf-GrIGr~vlr~l~e~-~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~-Gk~I~v~~ 94 (356)
T 3hja_A 18 GPGSMKLAINGF-GRIGRNVFKIAFER-GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVD-GREIKIIA 94 (356)
T ss_dssp ----CEEEEECC-SHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEET-TEEEEEEC
T ss_pred CCCCeEEEEECC-CHHHHHHHHHHHHC-CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEEC-CEEEEEEE
Confidence 345699999996 99999999998876 899999866310 010 000000000 12244543
Q ss_pred --CHHHHHhcccccCCccEEEEcc----CchhHHHHHHHHHH-cCCc-EEEeCCC
Q 031216 93 --DLTMVLGSISQSKARAVVIDFT----DASTVYDNVKQATA-FGMR-SVVYVPH 139 (163)
Q Consensus 93 --~l~ell~~~~~~~~~DVVIDfT----~p~~~~~~~~~al~-~G~~-vVigttg 139 (163)
+++++-.. +..+|+|+++| +|....+.+...++ .|.. ||+-.|.
T Consensus 95 ~~dp~~i~w~---~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps 146 (356)
T 3hja_A 95 ERDPKNLPWA---KLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPA 146 (356)
T ss_dssp CSSGGGCCHH---HHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCC
T ss_pred cCChhhCCcc---ccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCC
Confidence 45443211 13899999866 33333667777778 8854 6664543
No 223
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=97.16 E-value=0.0018 Score=52.66 Aligned_cols=88 Identities=22% Similarity=0.221 Sum_probs=52.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
+++||.|+|++|.+|+.+++.+.+ .+.+++++..+.. ...+.-+ ..++.-.+++++++. ++|+||.+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~r~~~-~~~~~~~-----~~Dl~d~~~~~~~~~------~~d~vih~ 84 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRT-QGRTVRGFDLRPS-GTGGEEV-----VGSLEDGQALSDAIM------GVSAVLHL 84 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHH-TTCCEEEEESSCC-SSCCSEE-----ESCTTCHHHHHHHHT------TCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHh-CCCEEEEEeCCCC-CCCccEE-----ecCcCCHHHHHHHHh------CCCEEEEC
Confidence 458899999999999999999985 5788887644321 1111100 111111133455553 89999987
Q ss_pred cCc-----h-----------hHHHHHHHHHHcCC-cEE
Q 031216 114 TDA-----S-----------TVYDNVKQATAFGM-RSV 134 (163)
Q Consensus 114 T~p-----~-----------~~~~~~~~al~~G~-~vV 134 (163)
..+ . .....+..+.+.|+ ++|
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V 122 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFV 122 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEE
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 522 1 12345677777886 454
No 224
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=97.16 E-value=0.0015 Score=52.13 Aligned_cols=93 Identities=15% Similarity=0.207 Sum_probs=55.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCC---cchhhhccCCCCCCccee-------CCHHHHHhccccc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG---EDIGMVCDMEQPLEIPVM-------SDLTMVLGSISQS 104 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g---~~~~~l~g~~~~~gi~v~-------~~l~ell~~~~~~ 104 (163)
|.||.|+|++|.+|+.+++.+.+ .+.++.++..+.... .....+.... ..++.+. +++++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~----- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLD-LGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK----- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH-TTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHh-CCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHc-----
Confidence 57899999999999999999986 467887654432110 0010000000 1222221 23445554
Q ss_pred CCccEEEEccCch---hHHHHHHHHHHcC-CcEEE
Q 031216 105 KARAVVIDFTDAS---TVYDNVKQATAFG-MRSVV 135 (163)
Q Consensus 105 ~~~DVVIDfT~p~---~~~~~~~~al~~G-~~vVi 135 (163)
.+|+||.++.+. .....+..|.+.| +.-++
T Consensus 77 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 77 -NVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp -TCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred -CCCEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 799999877543 3456777888888 65555
No 225
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.15 E-value=0.0019 Score=52.43 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=26.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~ 70 (163)
|.||+|+| .|.||..++..+.+ .+.+++ ++|++
T Consensus 15 ~~~I~VIG-~G~mG~~iA~~la~-~G~~V~-~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIG-GGLMGAGIAQVAAA-TGHTVV-LVDQT 47 (302)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-CCCeEE-EEECC
Confidence 46899999 59999999999874 588876 57753
No 226
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.15 E-value=0.00094 Score=50.51 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=28.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
|||.|+|++|.+|+.+++.+.+ .+.+++++..+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKN-RGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHh-CCCEEEEEEcC
Confidence 5899999999999999999985 57899876553
No 227
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=97.15 E-value=0.002 Score=51.94 Aligned_cols=39 Identities=13% Similarity=0.222 Sum_probs=28.8
Q ss_pred CCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 30 ~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.|++.++||.|+|++|.+|+.+++.+.+ .+.+++++..+
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r~ 47 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLE-KGYRVHGLVAR 47 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECC
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHH-CCCeEEEEeCC
Confidence 3677889999999999999999999985 57898876553
No 228
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=97.14 E-value=0.0024 Score=51.92 Aligned_cols=35 Identities=23% Similarity=0.154 Sum_probs=29.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
+++||.|+|++|.+|+.+++.+.+ .+.++.++..+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLK-LNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 357999999999999999999985 57898876653
No 229
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=97.14 E-value=0.0017 Score=52.82 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=28.6
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+.+++||.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 59 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDN 59 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHH-CCCEEEEEeC
Confidence 34568999999999999999999985 5789887654
No 230
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.12 E-value=0.0021 Score=54.19 Aligned_cols=106 Identities=14% Similarity=0.094 Sum_probs=63.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
+.||+|+| +|.||..+++.+.+ .+.++. ++|++.. ...... ..|+..+.++++++..- ...+|+||.++
T Consensus 8 ~~kIgIIG-~G~mG~slA~~L~~-~G~~V~-~~dr~~~--~~~~a~----~~G~~~~~~~~e~~~~a--~~~aDlVilav 76 (341)
T 3ktd_A 8 SRPVCILG-LGLIGGSLLRDLHA-ANHSVF-GYNRSRS--GAKSAV----DEGFDVSADLEATLQRA--AAEDALIVLAV 76 (341)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSCHH--HHHHHH----HTTCCEESCHHHHHHHH--HHTTCEEEECS
T ss_pred CCEEEEEe-ecHHHHHHHHHHHH-CCCEEE-EEeCCHH--HHHHHH----HcCCeeeCCHHHHHHhc--ccCCCEEEEeC
Confidence 36899999 69999999999875 477776 5675421 111211 34556678888877410 01579999777
Q ss_pred CchhHHHHHHHHH--HcCCcEEEeCCCCCHHHHHHHHHHh
Q 031216 115 DASTVYDNVKQAT--AFGMRSVVYVPHIQLETVSALSAFC 152 (163)
Q Consensus 115 ~p~~~~~~~~~al--~~G~~vVigttg~~~e~~~~L~~~A 152 (163)
+|....+.+.... ..| .+|+-..+......+.+.+..
T Consensus 77 P~~~~~~vl~~l~~~~~~-~iv~Dv~Svk~~i~~~~~~~~ 115 (341)
T 3ktd_A 77 PMTAIDSLLDAVHTHAPN-NGFTDVVSVKTAVYDAVKARN 115 (341)
T ss_dssp CHHHHHHHHHHHHHHCTT-CCEEECCSCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHccCCC-CEEEEcCCCChHHHHHHHHhC
Confidence 6655555443332 334 345444455555455555443
No 231
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=97.12 E-value=0.0017 Score=51.93 Aligned_cols=93 Identities=20% Similarity=0.238 Sum_probs=55.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCC--cchhhhccCCCCCCcce----eCC---HHHHHhcccccC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG--EDIGMVCDMEQPLEIPV----MSD---LTMVLGSISQSK 105 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g--~~~~~l~g~~~~~gi~v----~~~---l~ell~~~~~~~ 105 (163)
|+||.|+|++|.+|+.+++.+.+ .+.++.++..+.... .....+.... ..++.+ ++| +++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~------ 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASIS-LGHPTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALK------ 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH-TTCCEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHT------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHh-CCCcEEEEECCCcccchhHHHHHHHHH-hCCeEEEeCCCCCHHHHHHHHh------
Confidence 57899999999999999999986 478888655432110 0111110000 112222 123 445553
Q ss_pred CccEEEEccCc-------hhHHHHHHHHHHcC-CcEEE
Q 031216 106 ARAVVIDFTDA-------STVYDNVKQATAFG-MRSVV 135 (163)
Q Consensus 106 ~~DVVIDfT~p-------~~~~~~~~~al~~G-~~vVi 135 (163)
.+|+||.++.+ ......+..|.+.| +.-++
T Consensus 76 ~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 76 QVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp TCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred CCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 79999987633 23456677888888 55444
No 232
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=97.11 E-value=0.001 Score=52.52 Aligned_cols=86 Identities=13% Similarity=0.207 Sum_probs=53.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhccCCCCCCcce-------eCCHHHHHhcccccCCc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKAR 107 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-------~~~l~ell~~~~~~~~~ 107 (163)
+||.|+|++|.+|+.+++.+.+. ++.++.++..+.. +...+.. .++.+ .+++++++ .++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~---~~~~l~~----~~~~~~~~D~~d~~~l~~~~------~~~ 67 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVE---KASTLAD----QGVEVRHGDYNQPESLQKAF------AGV 67 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTT---TTHHHHH----TTCEEEECCTTCHHHHHHHT------TTC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHH---HHhHHhh----cCCeEEEeccCCHHHHHHHH------hcC
Confidence 37999999999999999999865 4889887654322 1111110 11111 12334455 379
Q ss_pred cEEEEccCc--------hhHHHHHHHHHHcCC-cEE
Q 031216 108 AVVIDFTDA--------STVYDNVKQATAFGM-RSV 134 (163)
Q Consensus 108 DVVIDfT~p--------~~~~~~~~~al~~G~-~vV 134 (163)
|+||.++.+ ......++.+.+.|+ ++|
T Consensus 68 d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v 103 (287)
T 2jl1_A 68 SKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIA 103 (287)
T ss_dssp SEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 999987643 123455677778886 454
No 233
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=97.11 E-value=0.007 Score=51.61 Aligned_cols=113 Identities=13% Similarity=0.146 Sum_probs=61.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCC--------------CCCCcceeCCHHHHHhcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME--------------QPLEIPVMSDLTMVLGSI 101 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~--------------~~~gi~v~~~l~ell~~~ 101 (163)
+||+|+| +|+||..++..+.+ +.++++ +|++. ..+..+.... ....+..++++++++.
T Consensus 1 MkI~VIG-~G~vG~~~A~~La~--G~~V~~-~d~~~--~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~-- 72 (402)
T 1dlj_A 1 MKIAVAG-SGYVGLSLGVLLSL--QNEVTI-VDILP--SKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK-- 72 (402)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTT--TSEEEE-ECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH--
T ss_pred CEEEEEC-CCHHHHHHHHHHhC--CCEEEE-EECCH--HHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc--
Confidence 4899999 69999999999875 788765 56431 1111111000 0112345678877774
Q ss_pred cccCCccEEEEccCch-----------hHHHHHHHH--HHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 102 SQSKARAVVIDFTDAS-----------TVYDNVKQA--TAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 102 ~~~~~~DVVIDfT~p~-----------~~~~~~~~a--l~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
.+|+||.++.+. ...+.+... +..|.-||...| ......++|.+...+.+++++.
T Consensus 73 ----~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST-~~~g~~~~l~~~~~~~~v~~~P 140 (402)
T 1dlj_A 73 ----EAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKST-IPIGFITEMRQKFQTDRIIFSP 140 (402)
T ss_dssp ----HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSC-CCTTHHHHHHHHTTCSCEEECC
T ss_pred ----CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCC-CCccHHHHHHHHhCCCeEEECC
Confidence 789998665332 133322222 445555554333 2222344555555444666543
No 234
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.10 E-value=0.0045 Score=46.30 Aligned_cols=107 Identities=14% Similarity=0.056 Sum_probs=55.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-eC---CHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MS---DLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-~~---~l~ell~~~~~~~~~DVV 110 (163)
..+|+|+| .|+||+.+++.+.+..+.+++ ++|++. .....+. ..++.+ +. +.+ .+.+...-.++|+|
T Consensus 39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~-vid~~~--~~~~~~~----~~g~~~~~gd~~~~~-~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILG-MGRIGTGAYDELRARYGKISL-GIEIRE--EAAQQHR----SEGRNVISGDATDPD-FWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEEC-CSHHHHHHHHHHHHHHCSCEE-EEESCH--HHHHHHH----HTTCCEEECCTTCHH-HHHTBCSCCCCCEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhccCCeEE-EEECCH--HHHHHHH----HCCCCEEEcCCCCHH-HHHhccCCCCCCEE
Confidence 35899999 699999999998753267777 456432 1222221 123332 22 322 22210001478999
Q ss_pred EEccCchhH-HHHHHHHHHcC-CcEEEeCCCCCHHHHHHHHHH
Q 031216 111 IDFTDASTV-YDNVKQATAFG-MRSVVYVPHIQLETVSALSAF 151 (163)
Q Consensus 111 IDfT~p~~~-~~~~~~al~~G-~~vVigttg~~~e~~~~L~~~ 151 (163)
|.++..... ...+..+.+.+ ...|+.. ..+.+..+.|.++
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~-~~~~~~~~~l~~~ 151 (183)
T 3c85_A 110 LLAMPHHQGNQTALEQLQRRNYKGQIAAI-AEYPDQLEGLLES 151 (183)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCCSEEEEE-ESSHHHHHHHHHH
T ss_pred EEeCCChHHHHHHHHHHHHHCCCCEEEEE-ECCHHHHHHHHHc
Confidence 966644333 33344444544 2233322 2345555555443
No 235
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=97.10 E-value=0.0027 Score=51.20 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=28.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+||.|+|++|.+|+.+++.+.+.++.+++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 489999999999999999998776899887654
No 236
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.09 E-value=0.0016 Score=52.10 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=56.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC----------------Ccc-hhhh---c-cCCCCCCccee--
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV----------------GED-IGMV---C-DMEQPLEIPVM-- 91 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~----------------g~~-~~~l---~-g~~~~~gi~v~-- 91 (163)
..||.|+| .|.+|..+++.+.. .|+.=+.++|++.. |++ +..+ + .+.....+..+
T Consensus 31 ~~~VlVvG-~Gg~G~~va~~La~-~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 31 DSRVLIVG-LGGLGCAASQYLAS-AGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHHH-HTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CCeEEEEe-eCHHHHHHHHHHHH-cCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 36899999 59999999999874 57744457885421 111 1000 0 00001112111
Q ss_pred ----CCHHHHHhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeC
Q 031216 92 ----SDLTMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 92 ----~~l~ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigt 137 (163)
.++++++. ++|+|||++..... ......|.+.|+++|.+.
T Consensus 109 ~~~~~~~~~~~~------~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 109 LLDDAELAALIA------EHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp CCCHHHHHHHHH------TSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cCCHhHHHHHHh------CCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEee
Confidence 12344553 89999998844333 455677888999998654
No 237
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.09 E-value=0.0034 Score=52.93 Aligned_cols=91 Identities=14% Similarity=0.061 Sum_probs=52.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe---cCCCCcchhhhc---cC----CCCCC--------cc-eeCCHH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID---SHSVGEDIGMVC---DM----EQPLE--------IP-VMSDLT 95 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid---~~~~g~~~~~l~---g~----~~~~g--------i~-v~~~l~ 95 (163)
|+||+|+| .|.||..++..+.+..+.++.. ++ +.. ..+.... +. ....+ +. ++++++
T Consensus 2 ~mkI~ViG-aG~~G~~~a~~La~~~G~~V~~-~~~~~r~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (404)
T 3c7a_A 2 TVKVCVCG-GGNGAHTLSGLAASRDGVEVRV-LTLFADEA--ERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPE 77 (404)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTSTTEEEEE-ECCSTTHH--HHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHH
T ss_pred CceEEEEC-CCHHHHHHHHHHHhCCCCEEEE-EeCCCCcH--HHHHHHHhhccceeeeecCCCccceeeccceEEeCCHH
Confidence 57999999 5999999999886546888774 45 211 1111110 00 00001 22 567888
Q ss_pred HHHhcccccCCccEEEEccCchhHHHHHHHH---HHcCCcEEE
Q 031216 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQA---TAFGMRSVV 135 (163)
Q Consensus 96 ell~~~~~~~~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVi 135 (163)
+++. .+|+||.++.+....+.+... +..+..||.
T Consensus 78 ~a~~------~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 78 IAIS------GADVVILTVPAFAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp HHHT------TCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEE
T ss_pred HHhC------CCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEE
Confidence 8774 899999666555544444433 223554554
No 238
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=97.08 E-value=0.0032 Score=49.61 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=25.2
Q ss_pred CCCCCCeeEEEEcCCCHHHHHHHHHHHhcC
Q 031216 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKAR 59 (163)
Q Consensus 30 ~~~~~~irV~VvGa~G~mG~~i~~~i~~~~ 59 (163)
|+.-+|+||.|+|++|.+|+.+++.+.+..
T Consensus 1 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 1 NLYFQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred CccccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 344567899999999999999999998653
No 239
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.08 E-value=0.0027 Score=53.52 Aligned_cols=121 Identities=16% Similarity=0.056 Sum_probs=60.0
Q ss_pred cccccccccceeeeccCC---CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc
Q 031216 13 HHISQNVKAKRFISCSTN---PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP 89 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~---~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~ 89 (163)
....++++..+|-..... ..-...+|+|+| .|+||+.+++.+. .-|+++. ++|+... + ..+..
T Consensus 146 ~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIG-lG~IG~~vA~~l~-~~G~~V~-~~dr~~~--~---------~~~~~ 211 (340)
T 4dgs_A 146 GDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLG-LGQIGRALASRAE-AFGMSVR-YWNRSTL--S---------GVDWI 211 (340)
T ss_dssp HHHHHHHHTTCC------CCCCCCTTCEEEEEC-CSHHHHHHHHHHH-TTTCEEE-EECSSCC--T---------TSCCE
T ss_pred HHHHHHHhcCCcccccCcCccccccCCEEEEEC-CCHHHHHHHHHHH-HCCCEEE-EEcCCcc--c---------ccCce
Confidence 333455555555321011 122347999999 7999999999987 5688876 4665321 0 11233
Q ss_pred eeCCHHHHHhcccccCCccEEEEccCch-hHH----HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhh
Q 031216 90 VMSDLTMVLGSISQSKARAVVIDFTDAS-TVY----DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154 (163)
Q Consensus 90 v~~~l~ell~~~~~~~~~DVVIDfT~p~-~~~----~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~ 154 (163)
.+.++++++. ..|+|+...+.. ... +.....++.|.-+|--..|-- .+.+.|.++.++
T Consensus 212 ~~~sl~ell~------~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~v-vde~aL~~aL~~ 274 (340)
T 4dgs_A 212 AHQSPVDLAR------DSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNV-VDEDALIEALKS 274 (340)
T ss_dssp ECSSHHHHHH------TCSEEEECC----------CHHHHHHTTTTCEEEECSCC---------------
T ss_pred ecCCHHHHHh------cCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcc-cCHHHHHHHHHc
Confidence 4579999986 899999554311 112 223344556655554333432 223445444443
No 240
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.08 E-value=0.0011 Score=59.00 Aligned_cols=110 Identities=12% Similarity=0.066 Sum_probs=66.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhc-----CCcEEEEEEecCCCCcchhhhccCCCCCCcce----eCCHHHHHhcccccCC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKA-----RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MSDLTMVLGSISQSKA 106 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~-----~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v----~~~l~ell~~~~~~~~ 106 (163)
.||+|+| +|.||..+++.+.+. .+++++...++.....+... ..|+.+ ..++++++. .
T Consensus 55 KkIgIIG-lGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~------e~G~~v~d~ta~s~aEAa~------~ 121 (525)
T 3fr7_A 55 KQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEAR------AAGFTEESGTLGDIWETVS------G 121 (525)
T ss_dssp SEEEEEC-CTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHH------HTTCCTTTTCEEEHHHHHH------H
T ss_pred CEEEEEe-EhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHH------HCCCEEecCCCCCHHHHHh------c
Confidence 6899999 799999999999865 37887755554221122222 223332 257888875 8
Q ss_pred ccEEEEccCchhHHHH---HHHHHHcCCcEEEeCCCCCHHHHHH-HHHHhhhcCeEE
Q 031216 107 RAVVIDFTDASTVYDN---VKQATAFGMRSVVYVPHIQLETVSA-LSAFCDKASMVS 159 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~---~~~al~~G~~vVigttg~~~e~~~~-L~~~A~~~~Vv~ 159 (163)
.|+||..+.|....+. +...++.|.- |+=..|++-...+. ....-+..+|+.
T Consensus 122 ADVVILaVP~~~~~eVl~eI~p~LK~GaI-Ls~AaGf~I~~le~~~i~~p~dv~VVr 177 (525)
T 3fr7_A 122 SDLVLLLISDAAQADNYEKIFSHMKPNSI-LGLSHGFLLGHLQSAGLDFPKNISVIA 177 (525)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSCTTCE-EEESSSHHHHHHHHTTCCCCTTSEEEE
T ss_pred CCEEEECCChHHHHHHHHHHHHhcCCCCe-EEEeCCCCHHHHhhhcccCCCCCcEEE
Confidence 9999977766554333 3344455654 45467886554332 223334455554
No 241
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=97.07 E-value=0.0028 Score=54.99 Aligned_cols=113 Identities=14% Similarity=0.186 Sum_probs=73.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhccCCC------CC-CcceeCCHHHHHhcc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQ------PL-EIPVMSDLTMVLGSI 101 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-----~~g~~~~~l~g~~~------~~-gi~v~~~l~ell~~~ 101 (163)
...||+|.| .|.+|+..++.+.+..+.+++++.|+. ..|-|..++..... .+ +.. +-+.++++.
T Consensus 208 ~g~~vaVqG-~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~-~~~~~eil~-- 283 (415)
T 2tmg_A 208 KKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGE-RITNEELLE-- 283 (415)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSE-EECHHHHTT--
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCce-EcCchhhhc--
Confidence 347899999 799999999988753799999999963 44555544332110 00 111 225677776
Q ss_pred cccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEc
Q 031216 102 SQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 102 ~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
.++|+++.++..+.. .+++. +-+..+|++-. .++++..+.| ++.+|++-
T Consensus 284 ---~~~DIliP~A~~n~i~~~~a~---~l~ak~V~EgAN~p~t~~a~~~l----~~~Gi~~~ 335 (415)
T 2tmg_A 284 ---LDVDILVPAALEGAIHAGNAE---RIKAKAVVEGANGPTTPEADEIL----SRRGILVV 335 (415)
T ss_dssp ---CSCSEEEECSSTTSBCHHHHT---TCCCSEEECCSSSCBCHHHHHHH----HHTTCEEE
T ss_pred ---CCCcEEEecCCcCccCcccHH---HcCCeEEEeCCCcccCHHHHHHH----HHCCCEEE
Confidence 599999998866554 34444 34888888766 4565544433 35567664
No 242
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.07 E-value=0.0024 Score=53.23 Aligned_cols=111 Identities=10% Similarity=0.015 Sum_probs=63.0
Q ss_pred cccccccccceeeeccCC----CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCc
Q 031216 13 HHISQNVKAKRFISCSTN----PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI 88 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~----~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi 88 (163)
+...++++..+|-..... ..-...+|+|+| .|+||+.+++.+. .-++++. ++|+... ...... ..++
T Consensus 129 ~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG-~G~iG~~iA~~l~-~~G~~V~-~~d~~~~--~~~~~~----~~g~ 199 (330)
T 2gcg_A 129 PEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIG-LGRIGQAIARRLK-PFGVQRF-LYTGRQP--RPEEAA----EFQA 199 (330)
T ss_dssp HHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEEC-CSHHHHHHHHHHG-GGTCCEE-EEESSSC--CHHHHH----TTTC
T ss_pred HHHHHHHHcCCCcccCcccccCcCCCCCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EECCCCc--chhHHH----hcCc
Confidence 334455666666321110 122347899999 6999999999987 4578876 4664321 111111 2344
Q ss_pred ceeCCHHHHHhcccccCCccEEEEccCchh-H---H-HHHHHHHHcCCcEEEeCCC
Q 031216 89 PVMSDLTMVLGSISQSKARAVVIDFTDAST-V---Y-DNVKQATAFGMRSVVYVPH 139 (163)
Q Consensus 89 ~v~~~l~ell~~~~~~~~~DVVIDfT~p~~-~---~-~~~~~al~~G~~vVigttg 139 (163)
... ++++++. ..|+|+....+.. . . +.....++.|.-+|.-.+|
T Consensus 200 ~~~-~l~e~l~------~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg 248 (330)
T 2gcg_A 200 EFV-STPELAA------QSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRG 248 (330)
T ss_dssp EEC-CHHHHHH------HCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCG
T ss_pred eeC-CHHHHHh------hCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence 433 8888885 8999997664321 1 1 2233445566555543334
No 243
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=97.06 E-value=0.002 Score=51.39 Aligned_cols=34 Identities=26% Similarity=0.247 Sum_probs=28.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid 68 (163)
++||.|+|++|.+|+.+++.+.+. ++.+++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 368999999999999999999876 4788887654
No 244
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=97.06 E-value=0.0036 Score=49.93 Aligned_cols=90 Identities=11% Similarity=0.023 Sum_probs=54.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce----e---CCHHHHHhcccccCCc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----M---SDLTMVLGSISQSKAR 107 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v----~---~~l~ell~~~~~~~~~ 107 (163)
+.+|.|+|++|.+|+.+++.+.+..+.++.++..+.. ......+. ..++.+ + +++++++. .+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-~~~~~~l~----~~~~~~~~~D~~d~~~l~~~~~------~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-KKAAKELR----LQGAEVVQGDQDDQVIMELALN------GA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-SHHHHHHH----HTTCEEEECCTTCHHHHHHHHT------TC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-CHHHHHHH----HCCCEEEEecCCCHHHHHHHHh------cC
Confidence 3689999999999999999998765488887654322 11111111 112211 1 23445553 79
Q ss_pred cEEEEccCch----------hHHHHHHHHHHcCCc-EEE
Q 031216 108 AVVIDFTDAS----------TVYDNVKQATAFGMR-SVV 135 (163)
Q Consensus 108 DVVIDfT~p~----------~~~~~~~~al~~G~~-vVi 135 (163)
|+||.++.+. .....+..+.+.|+. +|.
T Consensus 74 d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~ 112 (299)
T 2wm3_A 74 YATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY 112 (299)
T ss_dssp SEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999876421 123455667777864 444
No 245
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=97.06 E-value=0.0013 Score=54.50 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=29.0
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEe
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAID 68 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid 68 (163)
.+++||.|+|++|.+|+.+++.+.+ .+ .+++++..
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~-~g~~~V~~~~r 65 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLE-LGVNQVHVVDN 65 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHH-TTCSEEEEECC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHH-cCCceEEEEEC
Confidence 3567999999999999999999986 46 88887543
No 246
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=97.04 E-value=0.0032 Score=48.77 Aligned_cols=75 Identities=17% Similarity=0.124 Sum_probs=47.1
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
..++||+|+| .|.||+.+++.+.+ .+.++. ++|+.. . .+ .++|+||.
T Consensus 17 ~~~~~I~iiG-~G~mG~~la~~l~~-~g~~V~-~~~~~~-------------~-----------~~------~~aD~vi~ 63 (209)
T 2raf_A 17 FQGMEITIFG-KGNMGQAIGHNFEI-AGHEVT-YYGSKD-------------Q-----------AT------TLGEIVIM 63 (209)
T ss_dssp ---CEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECTTC-------------C-----------CS------SCCSEEEE
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEE-EEcCCH-------------H-----------Hh------ccCCEEEE
Confidence 3457999999 69999999999874 567766 345431 0 12 47899886
Q ss_pred ccCchhHHHHHH---HHHHcCCcEEEeCCCCC
Q 031216 113 FTDASTVYDNVK---QATAFGMRSVVYVPHIQ 141 (163)
Q Consensus 113 fT~p~~~~~~~~---~al~~G~~vVigttg~~ 141 (163)
+..+....+.+. ..++ +..+|.-++|++
T Consensus 64 av~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 64 AVPYPALAALAKQYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp CSCHHHHHHHHHHTHHHHT-TSEEEECCCCBC
T ss_pred cCCcHHHHHHHHHHHHhcC-CCEEEEECCCCC
Confidence 665544444433 2344 666665555665
No 247
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.03 E-value=0.00016 Score=61.20 Aligned_cols=93 Identities=14% Similarity=0.077 Sum_probs=60.3
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccC-CCCCC--cceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM-EQPLE--IPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~-~~~~g--i~v~~~l~ell~~~~~~~~~DVVI 111 (163)
..+|+|+| +|.||+.+++.+....+.+-+.+++++. ..+.++... ....+ +.+++++++++. ++|+||
T Consensus 129 ~~~v~iIG-aG~~a~~~a~al~~~~~~~~V~V~~r~~--~~a~~la~~~~~~~g~~~~~~~~~~eav~------~aDiVi 199 (350)
T 1x7d_A 129 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDP--LATAKLIANLKEYSGLTIRRASSVAEAVK------GVDIIT 199 (350)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSH--HHHHHHHHHHTTCTTCEEEECSSHHHHHT------TCSEEE
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHhCCCcEEEEEcCCH--HHHHHHHHHHHhccCceEEEeCCHHHHHh------cCCEEE
Confidence 46899999 6999999999887666787788888653 122222210 00113 445789999885 799999
Q ss_pred EccCchhHHHHH-HHHHHcCCcEEEe
Q 031216 112 DFTDASTVYDNV-KQATAFGMRSVVY 136 (163)
Q Consensus 112 DfT~p~~~~~~~-~~al~~G~~vVig 136 (163)
.+|+.....+.+ ...++.|++++.-
T Consensus 200 ~aTps~~~~pvl~~~~l~~G~~V~~v 225 (350)
T 1x7d_A 200 TVTADKAYATIITPDMLEPGMHLNAV 225 (350)
T ss_dssp ECCCCSSEEEEECGGGCCTTCEEEEC
T ss_pred EeccCCCCCceecHHHcCCCCEEEEC
Confidence 666433211111 2456789998853
No 248
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=97.03 E-value=0.0033 Score=52.74 Aligned_cols=86 Identities=12% Similarity=0.010 Sum_probs=55.9
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| .|+||+.+++.+. .-|+++. ++|+.... ..++..+.++++++. ..|+|+..
T Consensus 163 ~g~~vgIIG-~G~iG~~vA~~l~-~~G~~V~-~~dr~~~~-----------~~g~~~~~~l~ell~------~aDvVil~ 222 (333)
T 3ba1_A 163 SGKRVGIIG-LGRIGLAVAERAE-AFDCPIS-YFSRSKKP-----------NTNYTYYGSVVELAS------NSDILVVA 222 (333)
T ss_dssp TTCCEEEEC-CSHHHHHHHHHHH-TTTCCEE-EECSSCCT-----------TCCSEEESCHHHHHH------TCSEEEEC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEE-EECCCchh-----------ccCceecCCHHHHHh------cCCEEEEe
Confidence 346899999 6999999999987 5678876 46653210 113344679999885 89999966
Q ss_pred cCchh-H---H-HHHHHHHHcCCcEEEeCCC
Q 031216 114 TDAST-V---Y-DNVKQATAFGMRSVVYVPH 139 (163)
Q Consensus 114 T~p~~-~---~-~~~~~al~~G~~vVigttg 139 (163)
..+.. . . +.....++.|.-+|.-..|
T Consensus 223 vP~~~~t~~li~~~~l~~mk~gailIn~srG 253 (333)
T 3ba1_A 223 CPLTPETTHIINREVIDALGPKGVLINIGRG 253 (333)
T ss_dssp SCCCGGGTTCBCHHHHHHHCTTCEEEECSCG
T ss_pred cCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 64422 2 1 2233456667665543344
No 249
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.03 E-value=0.0019 Score=54.38 Aligned_cols=69 Identities=12% Similarity=0.050 Sum_probs=46.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| .|+||+.+++.+...-++++. ++|+.....+... ..++...+++++++. ..|+|+..
T Consensus 162 ~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~-~~d~~~~~~~~~~------~~g~~~~~~l~ell~------~aDvVil~ 227 (348)
T 2w2k_A 162 RGHVLGAVG-LGAIQKEIARKAVHGLGMKLV-YYDVAPADAETEK------ALGAERVDSLEELAR------RSDCVSVS 227 (348)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEE-EECSSCCCHHHHH------HHTCEECSSHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEE-ECHHHHHHHHHHHHhcCCEEE-EECCCCcchhhHh------hcCcEEeCCHHHHhc------cCCEEEEe
Confidence 346899999 799999999998624678876 4675432111111 123444468999885 89999976
Q ss_pred cCc
Q 031216 114 TDA 116 (163)
Q Consensus 114 T~p 116 (163)
..+
T Consensus 228 vp~ 230 (348)
T 2w2k_A 228 VPY 230 (348)
T ss_dssp CCC
T ss_pred CCC
Confidence 644
No 250
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=97.03 E-value=0.0023 Score=51.23 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=49.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||.|+|++|.+|+.+++.+.+ .+.+++++..+...+ . +. ..++.-.+++++++.. .++|+||.+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~---~-~~----~~Dl~d~~~~~~~~~~----~~~d~vih~A~ 69 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP---K-FE----QVNLLDSNAVHHIIHD----FQPHVIVHCAA 69 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEEEC--------------------------CHHHHHH----HCCSEEEECC-
T ss_pred CeEEEECCCcHHHHHHHHHHHh-CCCeEEEEccCCCCC---C-eE----EecCCCHHHHHHHHHh----hCCCEEEECCc
Confidence 6899999999999999999985 578888764322110 0 11 1122223456677752 26999998752
Q ss_pred ch------------------hHHHHHHHHHHcCCcEE
Q 031216 116 AS------------------TVYDNVKQATAFGMRSV 134 (163)
Q Consensus 116 p~------------------~~~~~~~~al~~G~~vV 134 (163)
+. .....++.+.+.|.++|
T Consensus 70 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v 106 (315)
T 2ydy_A 70 ERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLI 106 (315)
T ss_dssp ------------------CHHHHHHHHHHHHHTCEEE
T ss_pred ccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 21 12345667777787766
No 251
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.03 E-value=0.0023 Score=52.70 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=57.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCC-------cEEEEEEecCCC--Cc-chhhhc----------cCCCCCCcceeCCH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARG-------MEVAGAIDSHSV--GE-DIGMVC----------DMEQPLEIPVMSDL 94 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~-------~eLvgvid~~~~--g~-~~~~l~----------g~~~~~gi~v~~~l 94 (163)
++||+|+| .|.||..++..+.+. + .++. +++++.. ++ ....+. +..-..++..++|+
T Consensus 8 ~mkI~iIG-~G~mG~~~a~~l~~~-g~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (354)
T 1x0v_A 8 SKKVCIVG-SGNWGSAIAKIVGGN-AAQLAQFDPRVT-MWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDV 84 (354)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHH-HHHCTTEEEEEE-EECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSH
T ss_pred CCeEEEEC-CCHHHHHHHHHHHhc-CCcccCCCCeEE-EEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCH
Confidence 36999999 599999999988753 4 5554 5564321 00 111111 00001235556888
Q ss_pred HHHHhcccccCCccEEEEccCchhHHHHHHHH---HHcCCcEEEeCCCCC
Q 031216 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQ 141 (163)
Q Consensus 95 ~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigttg~~ 141 (163)
++++. ++|+||.++.+....+.+... +..+..+|.-+.|++
T Consensus 85 ~~~~~------~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 85 VQAAE------DADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHHHT------TCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred HHHHc------CCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 88774 899999666554444444433 233555666555665
No 252
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=97.03 E-value=0.0049 Score=51.12 Aligned_cols=36 Identities=22% Similarity=0.162 Sum_probs=30.1
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|+||.|+|++|.+|+.+++.+.+ .+.+++++..+
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~ 62 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKH-EGHYVIASDWK 62 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred ccCCeEEEECCccHHHHHHHHHHHH-CCCeEEEEECC
Confidence 3578999999999999999999985 57898876543
No 253
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=97.02 E-value=0.0016 Score=53.94 Aligned_cols=79 Identities=19% Similarity=0.175 Sum_probs=50.8
Q ss_pred cccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCH
Q 031216 15 ISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94 (163)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l 94 (163)
..++++..+|-.......-...+|+|+| .|+||+.+++.+. .-++++.+ +|+... .. +...+.++
T Consensus 104 ~~~~~~~g~w~~~~~~~~l~g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~~-~dr~~~-~~-----------~~~~~~~l 168 (303)
T 1qp8_A 104 YGEKMKRGDYGRDVEIPLIQGEKVAVLG-LGEIGTRVGKILA-ALGAQVRG-FSRTPK-EG-----------PWRFTNSL 168 (303)
T ss_dssp HHHHHHTTCCCCCSCCCCCTTCEEEEES-CSTHHHHHHHHHH-HTTCEEEE-ECSSCC-CS-----------SSCCBSCS
T ss_pred HHHHHHcCCCCCCCCCCCCCCCEEEEEc-cCHHHHHHHHHHH-HCCCEEEE-ECCCcc-cc-----------CcccCCCH
Confidence 3445566666221112233457899999 7999999999987 46888764 665332 10 11234688
Q ss_pred HHHHhcccccCCccEEEEcc
Q 031216 95 TMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 95 ~ell~~~~~~~~~DVVIDfT 114 (163)
++++. ..|+|+...
T Consensus 169 ~ell~------~aDvV~l~~ 182 (303)
T 1qp8_A 169 EEALR------EARAAVCAL 182 (303)
T ss_dssp HHHHT------TCSEEEECC
T ss_pred HHHHh------hCCEEEEeC
Confidence 89885 899988655
No 254
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=97.01 E-value=0.0037 Score=53.84 Aligned_cols=126 Identities=16% Similarity=0.234 Sum_probs=81.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcC--------------------CcEEEEEEec--CCCCcchhhhcc-----CCCC-
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKAR--------------------GMEVAGAIDS--HSVGEDIGMVCD-----MEQP- 85 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~--------------------~~eLvgvid~--~~~g~~~~~l~g-----~~~~- 85 (163)
-|+||.|+| .|+..+.+++-+.... |+|+|+++|. +.+|+++.+..- .+ +
T Consensus 12 ~~~~~~~~G-vGn~ASslvqGie~yk~~~~~~~Gl~~~~~~~y~~~DievvaafDVd~~KVGkdl~eai~~~pn~Vp-~~ 89 (394)
T 1vjp_A 12 HMVKVLILG-QGYVASTFVAGLEKLRKGEIEPYGVPLARELPIGFEDIKIVGSYDVDRAKIGKKLSEVVKQYWNDVD-SL 89 (394)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHHHTTSSCCTTCTTTTCSSSCGGGEEEEEEEECBTTTTTSBHHHHHHHHCTTCC-CC
T ss_pred heeeeEEEE-ehHHHHHHHHHHHHHHcCCCCCccccchhccCCCcCceEEEEEEeccccccCCcHHHHHhhCcCCCC-cc
Confidence 479999999 6999999887654211 3799999993 457777654321 11 1
Q ss_pred -CCccee-----C----------------CHHHHHhcc---cccCCccEEEEcc------Cch-----------------
Q 031216 86 -LEIPVM-----S----------------DLTMVLGSI---SQSKARAVVIDFT------DAS----------------- 117 (163)
Q Consensus 86 -~gi~v~-----~----------------~l~ell~~~---~~~~~~DVVIDfT------~p~----------------- 117 (163)
.++.|. + +.++..+++ .++.++||||... ...
T Consensus 90 l~~V~V~~G~~ldg~~~~~~~~~~~~e~~s~~e~v~~vv~~lk~~~~DVvIn~~STE~~~p~gs~~~l~~ai~~~~~~~i 169 (394)
T 1vjp_A 90 TSDPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERL 169 (394)
T ss_dssp SSCCBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHHHHHHHHCCSEEEECCCCCCCCCCSSHHHHHHHHHTTCTTTC
T ss_pred cCCCEEEeccccCcccccchhhhccccccchhhHHHHHHHHHHHcCCCEEEEecCccCCCCCCCHHHHHHHHhcCCCCcc
Confidence 122111 0 112222111 1246899999875 111
Q ss_pred -hHHHHHHHHHH-----cCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 118 -TVYDNVKQATA-----FGMRSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 118 -~~~~~~~~al~-----~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
...-|+.+|++ .|++.|-++|.+... .+.+.+++++.++.+.|.
T Consensus 170 ~aS~~YA~AAl~~~~~~aG~~fVN~~P~~ia~-~P~~~ela~~~gvpi~GD 219 (394)
T 1vjp_A 170 TATQVYAYAAALYANKRGGAAFVNVIPTFIAN-DPAFVELAKENNLVVFGD 219 (394)
T ss_dssp CHHHHHHHHHHHHHHHHTCEEEEECSSSCSTT-CHHHHHHHHHTTEEEECS
T ss_pred ChHHHHHHHHHhhccccCCcceEecCCccccC-CHHHHHHHHHcCCCEEcc
Confidence 23457789999 999999999976432 366999999999998774
No 255
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.00 E-value=0.0018 Score=53.65 Aligned_cols=124 Identities=16% Similarity=0.054 Sum_probs=68.0
Q ss_pred cccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCH
Q 031216 15 ISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94 (163)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l 94 (163)
..++++..+|- ......-...+|+|+| .|+||+.+++.+.. -++++. ++|+... .. ... ..++. +.++
T Consensus 123 ~~~~~~~g~w~-~~~~~~l~g~~vgIIG-~G~IG~~~A~~l~~-~G~~V~-~~d~~~~--~~-~~~----~~g~~-~~~l 190 (313)
T 2ekl_A 123 SMALAKSGIFK-KIEGLELAGKTIGIVG-FGRIGTKVGIIANA-MGMKVL-AYDILDI--RE-KAE----KINAK-AVSL 190 (313)
T ss_dssp HHHHHHTTCCC-CCCCCCCTTCEEEEES-CSHHHHHHHHHHHH-TTCEEE-EECSSCC--HH-HHH----HTTCE-ECCH
T ss_pred HHHHHHcCCCC-CCCCCCCCCCEEEEEe-eCHHHHHHHHHHHH-CCCEEE-EECCCcc--hh-HHH----hcCce-ecCH
Confidence 34455555552 1111223447899999 79999999999874 588887 4665431 11 111 23443 3489
Q ss_pred HHHHhcccccCCccEEEEccCchh-H---H-HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 95 TMVLGSISQSKARAVVIDFTDAST-V---Y-DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 95 ~ell~~~~~~~~~DVVIDfT~p~~-~---~-~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
++++. ..|+|+...+... . . +.....++.|.-+|.-.+|- ..+.+.|.++.++..+
T Consensus 191 ~ell~------~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~-~vd~~aL~~aL~~g~i 251 (313)
T 2ekl_A 191 EELLK------NSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAV-AVNGKALLDYIKKGKV 251 (313)
T ss_dssp HHHHH------HCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGG-GBCHHHHHHHHHTTCE
T ss_pred HHHHh------hCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCc-ccCHHHHHHHHHcCCC
Confidence 99885 8999996653211 1 1 23334455565444433331 2223445555554433
No 256
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=96.98 E-value=0.0012 Score=56.09 Aligned_cols=129 Identities=7% Similarity=0.030 Sum_probs=69.8
Q ss_pred cccccccccceeeecc---CCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcE-EEEEEecCCCCcchhhhccCCCCCCc
Q 031216 13 HHISQNVKAKRFISCS---TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGME-VAGAIDSHSVGEDIGMVCDMEQPLEI 88 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~---~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~e-Lvgvid~~~~g~~~~~l~g~~~~~gi 88 (163)
+...++++..+|-... ....-...+|+|+| .|+||+.+++.+.. -+++ +. ++|+.....+... ..++
T Consensus 139 ~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG-~G~IG~~vA~~l~~-~G~~~V~-~~d~~~~~~~~~~------~~g~ 209 (364)
T 2j6i_A 139 VPAHEQIINHDWEVAAIAKDAYDIEGKTIATIG-AGRIGYRVLERLVP-FNPKELL-YYDYQALPKDAEE------KVGA 209 (364)
T ss_dssp HHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEEC-CSHHHHHHHHHHGG-GCCSEEE-EECSSCCCHHHHH------HTTE
T ss_pred HHHHHHHHhCCCCcCcccCCcccCCCCEEEEEC-cCHHHHHHHHHHHh-CCCcEEE-EECCCccchhHHH------hcCc
Confidence 3334455666663211 11223457899999 79999999999874 5786 76 4665321111111 2344
Q ss_pred ceeCCHHHHHhcccccCCccEEEEccCchh-H----HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 89 PVMSDLTMVLGSISQSKARAVVIDFTDAST-V----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 89 ~v~~~l~ell~~~~~~~~~DVVIDfT~p~~-~----~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
..+.++++++. ..|+|+...+... . .+.....++.|.-+|.-..|- ..+.+.|.++.++..+
T Consensus 210 ~~~~~l~ell~------~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~-~vd~~aL~~aL~~g~i 276 (364)
T 2j6i_A 210 RRVENIEELVA------QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGA-ICVAEDVAAALESGQL 276 (364)
T ss_dssp EECSSHHHHHH------TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGG-GBCHHHHHHHHHHTSE
T ss_pred EecCCHHHHHh------cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCc-hhCHHHHHHHHHcCCC
Confidence 44568999985 8999997664431 1 122333344554444322332 1222445555554443
No 257
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=96.98 E-value=0.0016 Score=51.74 Aligned_cols=82 Identities=13% Similarity=0.136 Sum_probs=51.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
|||.|+|++|.+|+.+++.+. .+.+++++ ++... .. ..++.-.+++++++.. .++|+||.+..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~--~g~~V~~~-~r~~~------~~----~~D~~d~~~~~~~~~~----~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA--PVGNLIAL-DVHSK------EF----CGDFSNPKGVAETVRK----LRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT--TTSEEEEE-CTTCS------SS----CCCTTCHHHHHHHHHH----HCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh--cCCeEEEe-ccccc------cc----cccCCCHHHHHHHHHh----cCCCEEEECcc
Confidence 489999999999999999987 48998875 43211 00 1112112345566652 35999998753
Q ss_pred ch------------------hHHHHHHHHHHcCCcEE
Q 031216 116 AS------------------TVYDNVKQATAFGMRSV 134 (163)
Q Consensus 116 p~------------------~~~~~~~~al~~G~~vV 134 (163)
+. .....++.|.+.|+++|
T Consensus 64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v 100 (299)
T 1n2s_A 64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVV 100 (299)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEE
T ss_pred cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 21 12345566667777766
No 258
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.97 E-value=0.0064 Score=53.52 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=28.9
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~ 70 (163)
.++||+|+| +|.||..++..+.+.+|. ++++ +|++
T Consensus 17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~-~D~~ 52 (478)
T 3g79_A 17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLG-FQRN 52 (478)
T ss_dssp SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEE-ECCC
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEE-EECC
Confidence 468999999 699999999999876688 8875 6743
No 259
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=96.97 E-value=0.0024 Score=51.69 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=29.4
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
++.++.||.|+|++|.+|+.+++.+.+ .+.++++..++
T Consensus 5 ~~~~~~~vlVTGatGfIG~~l~~~Ll~-~G~~V~~~~r~ 42 (338)
T 2rh8_A 5 HPIGKKTACVVGGTGFVASLLVKLLLQ-KGYAVNTTVRD 42 (338)
T ss_dssp ----CCEEEEECTTSHHHHHHHHHHHH-TTCEEEEEESC
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHH-CCCEEEEEEcC
Confidence 334467899999999999999999885 68999876653
No 260
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.97 E-value=0.0029 Score=52.71 Aligned_cols=102 Identities=10% Similarity=0.022 Sum_probs=57.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCC-cchhh--------h--ccCCC--------CCCcceeCCH
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG-EDIGM--------V--CDMEQ--------PLEIPVMSDL 94 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g-~~~~~--------l--~g~~~--------~~gi~v~~~l 94 (163)
.+.||+|+| .|.||..++..+. ..|+++. ++|++... ..+.+ + .|... ...+..++|+
T Consensus 5 ~~~kI~vIG-aG~MG~~iA~~la-~~G~~V~-l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~ 81 (319)
T 2dpo_A 5 AAGDVLIVG-SGLVGRSWAMLFA-SGGFRVK-LYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNL 81 (319)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHH-HTTCCEE-EECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCH
T ss_pred CCceEEEEe-eCHHHHHHHHHHH-HCCCEEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCH
Confidence 357899999 5999999999987 4588876 46754210 01100 0 11100 0124567899
Q ss_pred HHHHhcccccCCccEEEEccCchh-HH-HHHH---HHHHcCCcEEEeCCCCCHHH
Q 031216 95 TMVLGSISQSKARAVVIDFTDAST-VY-DNVK---QATAFGMRSVVYVPHIQLET 144 (163)
Q Consensus 95 ~ell~~~~~~~~~DVVIDfT~p~~-~~-~~~~---~al~~G~~vVigttg~~~e~ 144 (163)
++++. ++|+||.+..... .. +... ..+..+.-++.-|++++..+
T Consensus 82 ~eav~------~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~ 130 (319)
T 2dpo_A 82 AEAVE------GVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSK 130 (319)
T ss_dssp HHHTT------TEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHH
T ss_pred HHHHh------cCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHH
Confidence 98874 8999996653321 22 2222 22334444444555776544
No 261
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.97 E-value=0.0025 Score=55.32 Aligned_cols=70 Identities=11% Similarity=0.123 Sum_probs=45.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcC-CcEEEEEEecCCCCcchhh---------------hccCCCCCCcceeCCHHHHH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDIGM---------------VCDMEQPLEIPVMSDLTMVL 98 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~-~~eLvgvid~~~~g~~~~~---------------l~g~~~~~gi~v~~~l~ell 98 (163)
|+||+|+| +|+||..++..+.+.. +.++++ +|++. ..+.. +.......++..++|+++++
T Consensus 5 ~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~-~d~~~--~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~ 80 (467)
T 2q3e_A 5 IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTV-VDVNE--SRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAI 80 (467)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEE-ECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHH
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEE-EECCH--HHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHH
Confidence 57999999 6999999999988653 788764 57431 11111 11000012456678888877
Q ss_pred hcccccCCccEEEEcc
Q 031216 99 GSISQSKARAVVIDFT 114 (163)
Q Consensus 99 ~~~~~~~~~DVVIDfT 114 (163)
. .+|+||.+.
T Consensus 81 ~------~aDvViiaV 90 (467)
T 2q3e_A 81 K------EADLVFISV 90 (467)
T ss_dssp H------HCSEEEECC
T ss_pred h------cCCEEEEEc
Confidence 5 799999664
No 262
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=96.96 E-value=0.0062 Score=52.56 Aligned_cols=128 Identities=15% Similarity=0.189 Sum_probs=76.9
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHh--------------------cCCcEEEEEEec--CCCCcchhhhccC--------
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTK--------------------ARGMEVAGAIDS--HSVGEDIGMVCDM-------- 82 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~--------------------~~~~eLvgvid~--~~~g~~~~~l~g~-------- 82 (163)
-.|+||+|+| .|..+..++.-+.. .++.+++|+.|. ...|+++.+..-.
T Consensus 11 ~~mIrVaIvG-vGnvASTlvqGv~~~r~g~~~~~G~p~~~~~p~~~~Di~vvgg~DId~~kvgk~l~eAi~~~~n~~~~~ 89 (394)
T 3cin_A 11 HHMVKVLILG-QGYVASTFVAGLEKLRKGEIEPYGVPLARELPIGFEDIKIVGSYDVDRAKIGKKLSEVVKQYWNDVDSL 89 (394)
T ss_dssp -CCEEEEEEC-CSHHHHHHHHHHHHHHTTSSCCTTCTTTTCSSSCGGGEEEEEEEECBTTTTTSBHHHHHHHHCTTCCCC
T ss_pred cceeEEEEec-CCHHHHHHHHHHHHHHcCCCCCccccccccCCCCCCCcEEEEEecCCcchhHHHHHHHHhhchhccccc
Confidence 4689999999 59999999887651 236789999993 3456664433210
Q ss_pred CC--C-----------------CCcceeCCHHHHHhcc---cccCCccEEEEccC-----ch------------------
Q 031216 83 EQ--P-----------------LEIPVMSDLTMVLGSI---SQSKARAVVIDFTD-----AS------------------ 117 (163)
Q Consensus 83 ~~--~-----------------~gi~v~~~l~ell~~~---~~~~~~DVVIDfT~-----p~------------------ 117 (163)
.. . .+..-..++.+.++.+ .++.+.||||...+ |.
T Consensus 90 ~~~p~~~~~v~~~~~~~~~~~~~~~~~~~~~~e~i~~~~k~~~~~~~~Vvvn~asTE~ylpvgs~~~~~~a~~~~~~~~i 169 (394)
T 3cin_A 90 TSDPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERL 169 (394)
T ss_dssp SSCCBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHHHHHHHHCCSEEEECCCCCCCCCCSSHHHHHHHHHTTCTTTC
T ss_pred cCccccccCcccccccCcCccccchhhhhhHHHhHHHHHHHhhhccceeEeeecccccCCCCCCHHHHHHHhhccccccC
Confidence 00 0 0000001111211111 02347789997431 11
Q ss_pred -hHHHHHHHHH-----HcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcCC
Q 031216 118 -TVYDNVKQAT-----AFGMRSVVYVPHIQLETVSALSAFCDKASMVSTGS 162 (163)
Q Consensus 118 -~~~~~~~~al-----~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg~ 162 (163)
...-|+.+|+ +.|++.|-++|.+... .+.+.+++++.++...|.
T Consensus 170 ~as~~YA~AAl~~aa~~aG~~fvN~~P~~ia~-~P~~~ela~~~gvpi~Gd 219 (394)
T 3cin_A 170 TATQVYAYAAALYANKRGGAAFVNVIPTFIAN-DPAFVELAKENNLVVFGD 219 (394)
T ss_dssp CHHHHHHHHHHHHHHHHTCEEEEECSSSCSTT-CHHHHHHHHHTTEEEECS
T ss_pred ChhHHHHHHHHHhhhhhcCCceecCCCccccC-cHHHHHHHHHcCCcEecc
Confidence 1223455555 8999999999977643 367999999999998874
No 263
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.95 E-value=0.0015 Score=53.18 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=53.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec--CCCCcchhhhccCC--CC-----CCcceeC--CHHHHHhccccc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDME--QP-----LEIPVMS--DLTMVLGSISQS 104 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~--~~~g~~~~~l~g~~--~~-----~gi~v~~--~l~ell~~~~~~ 104 (163)
+||+|+| .|.||..++..+.+ .+.++.. +|+ +. .....+.... .. ..+.+++ ++++++.
T Consensus 1 m~I~iiG-~G~mG~~~a~~L~~-~g~~V~~-~~r~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----- 70 (335)
T 1txg_A 1 MIVSILG-AGAMGSALSVPLVD-NGNEVRI-WGTEFDT--EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE----- 70 (335)
T ss_dssp CEEEEES-CCHHHHHHHHHHHH-HCCEEEE-ECCGGGH--HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT-----
T ss_pred CEEEEEC-cCHHHHHHHHHHHh-CCCeEEE-EEccCCH--HHHHHHHHhCcCcccCccccceEEecHHhHHHHHh-----
Confidence 4899999 59999999999875 4667664 554 21 1111211100 00 1124455 7777664
Q ss_pred CCccEEEEccCchhHHHHHHHH--HHcCCcEEEeCCCC
Q 031216 105 KARAVVIDFTDASTVYDNVKQA--TAFGMRSVVYVPHI 140 (163)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~a--l~~G~~vVigttg~ 140 (163)
++|+||.++.+....+.+... +..+..+|.-+.|+
T Consensus 71 -~~D~vi~~v~~~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 71 -NAEVVLLGVSTDGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp -TCSEEEECSCGGGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred -cCCEEEEcCChHHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 899999666665554444332 33455555433366
No 264
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=96.93 E-value=0.0016 Score=54.47 Aligned_cols=86 Identities=17% Similarity=0.143 Sum_probs=53.9
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| .|+||+.+++.+. .-++++. ++|+... .+... ..++. +.++++++. .+|+|+..
T Consensus 145 ~g~~vgIIG-~G~iG~~vA~~l~-~~G~~V~-~~d~~~~-~~~~~------~~g~~-~~~l~e~l~------~aDiVil~ 207 (333)
T 2d0i_A 145 YGKKVGILG-MGAIGKAIARRLI-PFGVKLY-YWSRHRK-VNVEK------ELKAR-YMDIDELLE------KSDIVILA 207 (333)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHG-GGTCEEE-EECSSCC-HHHHH------HHTEE-ECCHHHHHH------HCSEEEEC
T ss_pred CcCEEEEEc-cCHHHHHHHHHHH-HCCCEEE-EECCCcc-hhhhh------hcCce-ecCHHHHHh------hCCEEEEc
Confidence 347899999 6999999999987 4578876 4665432 11111 12333 348988885 89999976
Q ss_pred cCch-hH----HHHHHHHHHcCCcEEEeCC
Q 031216 114 TDAS-TV----YDNVKQATAFGMRSVVYVP 138 (163)
Q Consensus 114 T~p~-~~----~~~~~~al~~G~~vVigtt 138 (163)
..+. .. .+.....++.| +++-+.
T Consensus 208 vp~~~~t~~~i~~~~~~~mk~g--ilin~s 235 (333)
T 2d0i_A 208 LPLTRDTYHIINEERVKKLEGK--YLVNIG 235 (333)
T ss_dssp CCCCTTTTTSBCHHHHHHTBTC--EEEECS
T ss_pred CCCChHHHHHhCHHHHhhCCCC--EEEECC
Confidence 6443 11 22334456667 555443
No 265
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.92 E-value=0.0037 Score=52.74 Aligned_cols=67 Identities=19% Similarity=0.167 Sum_probs=46.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| .|+||+.+++.+. .-|+++.+ +|+... ..... ..++..+.++++++. ..|+|+..
T Consensus 167 ~g~tvGIIG-~G~IG~~vA~~l~-~~G~~V~~-~d~~~~-~~~~~------~~g~~~~~~l~ell~------~aDvV~l~ 230 (347)
T 1mx3_A 167 RGETLGIIG-LGRVGQAVALRAK-AFGFNVLF-YDPYLS-DGVER------ALGLQRVSTLQDLLF------HSDCVTLH 230 (347)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-TTTCEEEE-ECTTSC-TTHHH------HHTCEECSSHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEe-ECHHHHHHHHHHH-HCCCEEEE-ECCCcc-hhhHh------hcCCeecCCHHHHHh------cCCEEEEc
Confidence 347899999 7999999999987 46899774 675321 11111 224444568999886 79999976
Q ss_pred cCc
Q 031216 114 TDA 116 (163)
Q Consensus 114 T~p 116 (163)
.+.
T Consensus 231 ~P~ 233 (347)
T 1mx3_A 231 CGL 233 (347)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 266
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=96.91 E-value=0.0038 Score=49.98 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=40.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcc-hhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED-IGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~-~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
|+||.|+|++|.+|+.+++.+.+. + .++.+.++.....+ ....... ...++.- +++++++. .+|+||.+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~-g-~~v~~~~~~~~~~~~~~~~~~~-~~~Dl~~-~~~~~~~~------~~d~vih~ 70 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES-N-EIVVIDNLSSGNEEFVNEAARL-VKADLAA-DDIKDYLK------GAEEVWHI 70 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT-S-CEEEECCCSSCCGGGSCTTEEE-ECCCTTT-SCCHHHHT------TCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-C-CEEEEEcCCCCChhhcCCCcEE-EECcCCh-HHHHHHhc------CCCEEEEC
Confidence 578999999999999999999854 5 66655443221100 0000000 0112222 45667764 89999986
Q ss_pred c
Q 031216 114 T 114 (163)
Q Consensus 114 T 114 (163)
.
T Consensus 71 a 71 (313)
T 3ehe_A 71 A 71 (313)
T ss_dssp C
T ss_pred C
Confidence 5
No 267
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.91 E-value=0.0078 Score=51.66 Aligned_cols=68 Identities=21% Similarity=0.322 Sum_probs=43.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccC----CCC-----------CC-cceeCCHHHHHh
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM----EQP-----------LE-IPVMSDLTMVLG 99 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~----~~~-----------~g-i~v~~~l~ell~ 99 (163)
+||+|+| +|+||..++..+.+ .+.++++ +|+.. ..+..+... ..+ .+ +..++++++++.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~-~G~~V~~-~d~~~--~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~ 75 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSA-RGHEVIG-VDVSS--TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL 75 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc
Confidence 4899999 69999999999874 5788764 56431 111111100 000 12 556788888775
Q ss_pred cccccCCccEEEEcc
Q 031216 100 SISQSKARAVVIDFT 114 (163)
Q Consensus 100 ~~~~~~~~DVVIDfT 114 (163)
++|+||.+.
T Consensus 76 ------~aDvviiaV 84 (436)
T 1mv8_A 76 ------DSDVSFICV 84 (436)
T ss_dssp ------TCSEEEECC
T ss_pred ------cCCEEEEEc
Confidence 899999665
No 268
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.89 E-value=0.0016 Score=53.70 Aligned_cols=102 Identities=15% Similarity=0.036 Sum_probs=61.0
Q ss_pred cccccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeC
Q 031216 13 HHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS 92 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~ 92 (163)
....++++..+|-.. ....-.-.+|+|+| .|+||+.+++.+.. -|+++.+ +|+.... ...+...+
T Consensus 101 ~~~~~~~~~g~w~~~-~~~~l~g~tvGIIG-lG~IG~~vA~~l~~-~G~~V~~-~dr~~~~-----------~~~~~~~~ 165 (290)
T 3gvx_A 101 LENNELMKAGIFRQS-PTTLLYGKALGILG-YGGIGRRVAHLAKA-FGMRVIA-YTRSSVD-----------QNVDVISE 165 (290)
T ss_dssp HHHHHHHHTTCCCCC-CCCCCTTCEEEEEC-CSHHHHHHHHHHHH-HTCEEEE-ECSSCCC-----------TTCSEECS
T ss_pred hhhhhHhhhcccccC-Cceeeecchheeec-cCchhHHHHHHHHh-hCcEEEE-Eeccccc-----------cccccccC
Confidence 334455566665322 22233457999999 79999999999874 5899885 5643211 01123346
Q ss_pred CHHHHHhcccccCCccEEEEccCc-hhHH----HHHHHHHHcCCcEEE
Q 031216 93 DLTMVLGSISQSKARAVVIDFTDA-STVY----DNVKQATAFGMRSVV 135 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT~p-~~~~----~~~~~al~~G~~vVi 135 (163)
++++++. ..|+|+...+. +... +.....++.|.-+|-
T Consensus 166 ~l~ell~------~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN 207 (290)
T 3gvx_A 166 SPADLFR------QSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVN 207 (290)
T ss_dssp SHHHHHH------HCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEE
T ss_pred ChHHHhh------ccCeEEEEeeccccchhhhhHHHHhhhhcCceEEE
Confidence 9999986 89999855532 1111 233344555655554
No 269
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=96.88 E-value=0.00026 Score=56.70 Aligned_cols=104 Identities=12% Similarity=0.086 Sum_probs=59.7
Q ss_pred eEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccCc
Q 031216 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDA 116 (163)
Q Consensus 37 rV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~p 116 (163)
||+|+| +|+||+.+++.+.+. ++++ .+++++. .+..++.. ..+.. +++++++ . ++|+||.+|.+
T Consensus 118 ~v~iiG-~G~~g~~~a~~l~~~-g~~v-~v~~r~~--~~~~~l~~---~~~~~-~~~~~~~-~------~~Divi~~tp~ 181 (263)
T 2d5c_A 118 PALVLG-AGGAGRAVAFALREA-GLEV-WVWNRTP--QRALALAE---EFGLR-AVPLEKA-R------EARLLVNATRV 181 (263)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHT-TCCE-EEECSSH--HHHHHHHH---HHTCE-ECCGGGG-G------GCSEEEECSST
T ss_pred eEEEEC-CcHHHHHHHHHHHHC-CCEE-EEEECCH--HHHHHHHH---Hhccc-hhhHhhc-c------CCCEEEEccCC
Confidence 899999 599999999998864 5654 4677542 12222221 11222 5677666 4 78999977755
Q ss_pred hhHH---HHH-HHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEE
Q 031216 117 STVY---DNV-KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVS 159 (163)
Q Consensus 117 ~~~~---~~~-~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~ 159 (163)
..+. +.+ ...++.|..++ -. ++++.+. +|.+.+++.++.+
T Consensus 182 ~~~~~~~~~l~~~~l~~g~~vi-D~-~~~p~~t-~l~~~a~~~g~~~ 225 (263)
T 2d5c_A 182 GLEDPSASPLPAELFPEEGAAV-DL-VYRPLWT-RFLREAKAKGLKV 225 (263)
T ss_dssp TTTCTTCCSSCGGGSCSSSEEE-ES-CCSSSSC-HHHHHHHHTTCEE
T ss_pred CCCCCCCCCCCHHHcCCCCEEE-Ee-ecCCccc-HHHHHHHHCcCEE
Confidence 4321 111 23455666554 22 2222222 3666677766543
No 270
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.87 E-value=0.0035 Score=52.99 Aligned_cols=85 Identities=14% Similarity=0.142 Sum_probs=53.4
Q ss_pred cccccccccceeeeccC--C--CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCc
Q 031216 13 HHISQNVKAKRFISCST--N--PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI 88 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~~--~--~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi 88 (163)
+...++++..+|-.... . ..-.-.+|||+| .|+||+.+++.+. .-|+++.+ +|+... +.... . ++
T Consensus 147 ~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIG-lG~IG~~vA~~l~-~~G~~V~~-~dr~~~--~~~~~-----~-g~ 215 (345)
T 4g2n_A 147 YEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFG-MGRIGRAIATRAR-GFGLAIHY-HNRTRL--SHALE-----E-GA 215 (345)
T ss_dssp HHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEES-CSHHHHHHHHHHH-TTTCEEEE-ECSSCC--CHHHH-----T-TC
T ss_pred HHHHHHHHcCCCcccCcccccccccCCCEEEEEE-eChhHHHHHHHHH-HCCCEEEE-ECCCCc--chhhh-----c-CC
Confidence 33445556666532111 1 112346899999 7999999999987 45899875 665321 11111 1 33
Q ss_pred ceeCCHHHHHhcccccCCccEEEEcc
Q 031216 89 PVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 89 ~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
...+++++++. ..|+|+...
T Consensus 216 ~~~~~l~ell~------~sDvV~l~~ 235 (345)
T 4g2n_A 216 IYHDTLDSLLG------ASDIFLIAA 235 (345)
T ss_dssp EECSSHHHHHH------TCSEEEECS
T ss_pred eEeCCHHHHHh------hCCEEEEec
Confidence 44479999996 899998655
No 271
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=96.87 E-value=0.0047 Score=53.39 Aligned_cols=105 Identities=12% Similarity=0.057 Sum_probs=64.0
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEecCCCC---cchhhh----------------cc-C--CCCCC
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVG---EDIGMV----------------CD-M--EQPLE 87 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid~~~~g---~~~~~l----------------~g-~--~~~~g 87 (163)
|-++|.||.|.|+||-+|+..+..+.++|+ ++++++...+... +.+.++ -. + . ..+
T Consensus 5 ~~~~~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~~f~p~~v~v~d~~~~~~L~~~l~~~-~~~ 83 (406)
T 1q0q_A 5 HHSGMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQ-GSR 83 (406)
T ss_dssp ----CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHT-TCC
T ss_pred ccCCceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhcC-CCC
Confidence 456889999999999999999999999987 9999998842110 000010 00 0 0 112
Q ss_pred cceeCCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeC
Q 031216 88 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 88 i~v~~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigt 137 (163)
+.++...+.+. ++....++|+|+..-.=.....-...|+++|+.+-...
T Consensus 84 ~~v~~G~~~l~-~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLAN 132 (406)
T 1q0q_A 84 TEVLSGQQAAC-DMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLAN 132 (406)
T ss_dssp CEEEESHHHHH-HHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECC
T ss_pred cEEEeCHHHHH-HHhcCCCCCEEEEccccHhHHHHHHHHHHCCCeEEEec
Confidence 33443333222 12223568999855544455677788999999998744
No 272
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=96.85 E-value=0.0039 Score=49.90 Aligned_cols=61 Identities=15% Similarity=0.025 Sum_probs=41.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||.|+|++|.+|+.+++.+.+ .+.+++++ ++... .++ .-.+++++++.. .++|+||.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-~g~~v~~~-~r~~~----~D~---------~d~~~~~~~~~~----~~~d~vih~a 63 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-RGDVELVL-RTRDE----LNL---------LDSRAVHDFFAS----ERIDQVYLAA 63 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-CTTEEEEC-CCTTT----CCT---------TCHHHHHHHHHH----HCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCeEEEE-ecCcc----CCc---------cCHHHHHHHHHh----cCCCEEEEcC
Confidence 36899999999999999999875 57887764 33211 111 111345566642 3799999875
No 273
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.84 E-value=0.0024 Score=55.81 Aligned_cols=113 Identities=16% Similarity=0.108 Sum_probs=72.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhccCCCCCC-c-----ceeCCHHHHHhccc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLE-I-----PVMSDLTMVLGSIS 102 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-----~~g~~~~~l~g~~~~~g-i-----~v~~~l~ell~~~~ 102 (163)
+..||+|.| .|++|+..++.+.+ .+.+++++.|+. ..|.|..++.......+ + ..+-+.++++.
T Consensus 234 ~g~~vaVqG-fGnVG~~~a~~L~e-~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~--- 308 (440)
T 3aog_A 234 EGARVAIQG-FGNVGNAAARAFHD-HGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWG--- 308 (440)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTT---
T ss_pred cCCEEEEec-cCHHHHHHHHHHHH-CCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhc---
Confidence 347999999 79999999998874 699999999963 44555444432110000 0 12235677775
Q ss_pred ccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEc
Q 031216 103 QSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 103 ~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
.++|+++.++.++.. .+++. +-+..+|++-. .++++..+.| ++.+|++.
T Consensus 309 --~~~DIlvPcA~~n~i~~~na~---~l~ak~VvEgAN~p~t~eA~~iL----~~~GI~~~ 360 (440)
T 3aog_A 309 --LPVEFLVPAALEKQITEQNAW---RIRARIVAEGANGPTTPAADDIL----LEKGVLVV 360 (440)
T ss_dssp --CCCSEEEECSSSSCBCTTTGG---GCCCSEEECCSSSCBCHHHHHHH----HHHTCEEE
T ss_pred --CCCcEEEecCCcCccchhhHH---HcCCcEEEecCccccCHHHHHHH----HHCCCEEE
Confidence 599999998866544 33443 23888888766 4566554444 35577764
No 274
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=96.83 E-value=0.0055 Score=49.44 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=27.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+++|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-HGYDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-TTCEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-CCCcEEEEec
Confidence 46899999999999999999985 5889886543
No 275
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.82 E-value=0.0027 Score=50.29 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=27.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
|+||.|+| +|.+|+.+++.+.+ .+.+++++..+
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~-~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTA-QGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHH-TTCCEEEEECT
T ss_pred CCcEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 57899999 59999999999985 57898877654
No 276
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.82 E-value=0.0025 Score=53.94 Aligned_cols=87 Identities=14% Similarity=0.080 Sum_probs=54.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
.-.+|+|+| .|+||+.+++.+. .-|+++. ++|+... +..... ..++..++++++++. ..|+|+..
T Consensus 163 ~gktvGIIG-~G~IG~~vA~~l~-~~G~~V~-~~dr~~~--~~~~~~----~~g~~~~~~l~ell~------~aDvV~l~ 227 (351)
T 3jtm_A 163 EGKTIGTVG-AGRIGKLLLQRLK-PFGCNLL-YHDRLQM--APELEK----ETGAKFVEDLNEMLP------KCDVIVIN 227 (351)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHG-GGCCEEE-EECSSCC--CHHHHH----HHCCEECSCHHHHGG------GCSEEEEC
T ss_pred cCCEEeEEE-eCHHHHHHHHHHH-HCCCEEE-EeCCCcc--CHHHHH----hCCCeEcCCHHHHHh------cCCEEEEC
Confidence 347899999 7999999999987 4589966 4665321 111111 224444579999985 89999955
Q ss_pred cC--chh---HHHHHHHHHHcCCcEEE
Q 031216 114 TD--AST---VYDNVKQATAFGMRSVV 135 (163)
Q Consensus 114 T~--p~~---~~~~~~~al~~G~~vVi 135 (163)
.+ |+. ..+.....++.|.-+|-
T Consensus 228 ~Plt~~t~~li~~~~l~~mk~gailIN 254 (351)
T 3jtm_A 228 MPLTEKTRGMFNKELIGKLKKGVLIVN 254 (351)
T ss_dssp SCCCTTTTTCBSHHHHHHSCTTEEEEE
T ss_pred CCCCHHHHHhhcHHHHhcCCCCCEEEE
Confidence 43 222 12333444555654443
No 277
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=96.82 E-value=0.0056 Score=49.17 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=27.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
|+||.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r 33 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVD-EGLSVVVVDN 33 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCEEEEEeC
Confidence 57999999999999999999985 5788887543
No 278
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.80 E-value=0.011 Score=43.05 Aligned_cols=104 Identities=13% Similarity=0.170 Sum_probs=55.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-eeC---CHHHHHhcccccCCccEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMS---DLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~~---~l~ell~~~~~~~~~DVVI 111 (163)
.+|+|+| .|.+|+.+++.+.. .+.+++. +|+.. .....+. ...+.. +.. +.+.+... .-..+|+||
T Consensus 20 ~~v~IiG-~G~iG~~la~~L~~-~g~~V~v-id~~~--~~~~~~~---~~~g~~~~~~d~~~~~~l~~~--~~~~ad~Vi 89 (155)
T 2g1u_A 20 KYIVIFG-CGRLGSLIANLASS-SGHSVVV-VDKNE--YAFHRLN---SEFSGFTVVGDAAEFETLKEC--GMEKADMVF 89 (155)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-EESCG--GGGGGSC---TTCCSEEEESCTTSHHHHHTT--TGGGCSEEE
T ss_pred CcEEEEC-CCHHHHHHHHHHHh-CCCeEEE-EECCH--HHHHHHH---hcCCCcEEEecCCCHHHHHHc--CcccCCEEE
Confidence 5799999 59999999999875 5778774 56432 1111211 012322 222 22322210 013789999
Q ss_pred EccCchhHHHHH-HHHHH-cCCcEEEeCCCCCHHHHHHHHH
Q 031216 112 DFTDASTVYDNV-KQATA-FGMRSVVYVPHIQLETVSALSA 150 (163)
Q Consensus 112 DfT~p~~~~~~~-~~al~-~G~~vVigttg~~~e~~~~L~~ 150 (163)
.++.+......+ ..+.. .+...++... .+.+..+.|.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~~-~~~~~~~~l~~ 129 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARYMFNVENVIARV-YDPEKIKIFEE 129 (155)
T ss_dssp ECSSCHHHHHHHHHHHHHTSCCSEEEEEC-SSGGGHHHHHT
T ss_pred EEeCCcHHHHHHHHHHHHHCCCCeEEEEE-CCHHHHHHHHH
Confidence 877655554444 33444 5655555444 22333344544
No 279
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=96.80 E-value=0.0043 Score=54.75 Aligned_cols=74 Identities=8% Similarity=0.083 Sum_probs=61.0
Q ss_pred CCCcceeCCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 85 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 85 ~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
..++|+|.++.++.+. ...+|+.|.+.++..+.+.++.|.++|+++|+=+.|+..++..+|.++|++.++..-|
T Consensus 18 ~~~~Pv~~~~~~~~~~---p~~~DlavI~vPa~~v~~~v~e~~~~Gv~~viis~Gf~~~~~~~l~~~A~~~g~rliG 91 (480)
T 3dmy_A 18 SQALTQVRRWDSACQK---LPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMG 91 (480)
T ss_dssp --CCEEESSHHHHHHH---STTCCEEEECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHHTTCCEEC
T ss_pred CCCCcccchHHHHHhc---CCCCCEEEEecCHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 3478999998887653 1379999989989999999999999999988877799988888999999998876544
No 280
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.79 E-value=0.0024 Score=53.06 Aligned_cols=87 Identities=11% Similarity=0.114 Sum_probs=53.9
Q ss_pred cccccccccceeeecc----CCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-CCCCcchhhhccCCCCCC
Q 031216 13 HHISQNVKAKRFISCS----TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMVCDMEQPLE 87 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~----~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-~~~g~~~~~l~g~~~~~g 87 (163)
+...++++..+|-... ....-...+|+|+| .|+||+.+++.+. .-++++. ++|+ ... ..... ..+
T Consensus 120 ~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~~~-~~~~~------~~g 189 (320)
T 1gdh_A 120 GEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYG-FGSIGQALAKRAQ-GFDMDID-YFDTHRAS-SSDEA------SYQ 189 (320)
T ss_dssp HHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEEC-CSHHHHHHHHHHH-TTTCEEE-EECSSCCC-HHHHH------HHT
T ss_pred HHHHHHHHcCCCCccccccccCcCCCCCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EECCCCcC-hhhhh------hcC
Confidence 3344556666663111 01122347899999 7999999999987 4678876 4665 432 11111 224
Q ss_pred cceeCCHHHHHhcccccCCccEEEEccC
Q 031216 88 IPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 88 i~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+...+++++++. ..|+|+...+
T Consensus 190 ~~~~~~l~ell~------~aDvVil~~p 211 (320)
T 1gdh_A 190 ATFHDSLDSLLS------VSQFFSLNAP 211 (320)
T ss_dssp CEECSSHHHHHH------HCSEEEECCC
T ss_pred cEEcCCHHHHHh------hCCEEEEecc
Confidence 444458999885 8999996654
No 281
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=96.78 E-value=0.00037 Score=58.03 Aligned_cols=89 Identities=9% Similarity=-0.022 Sum_probs=58.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCC--CCcceeCCHHHHHhcccccCCccEEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP--LEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~--~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
..|++|+| +|.||+.+++.+....+++.+.+++++. .++.++...-.. .++. ++++++++ ++|+|+.
T Consensus 125 ~~~v~iIG-aG~~a~~~~~al~~~~~~~~V~v~~r~~--~~a~~la~~~~~~~~~~~-~~~~~e~v-------~aDvVi~ 193 (322)
T 1omo_A 125 SSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVRE--KAAKKFVSYCEDRGISAS-VQPAEEAS-------RCDVLVT 193 (322)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSH--HHHHHHHHHHHHTTCCEE-ECCHHHHT-------SSSEEEE
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHhCCccEEEEECCCH--HHHHHHHHHHHhcCceEE-ECCHHHHh-------CCCEEEE
Confidence 46899999 6999999999998767788888998653 122222210000 2344 78888875 4799996
Q ss_pred ccCchhHHHHH-HHHHHcCCcEEEe
Q 031216 113 FTDASTVYDNV-KQATAFGMRSVVY 136 (163)
Q Consensus 113 fT~p~~~~~~~-~~al~~G~~vVig 136 (163)
+|+. .. +.+ ...++.|++|+..
T Consensus 194 aTp~-~~-pv~~~~~l~~G~~V~~i 216 (322)
T 1omo_A 194 TTPS-RK-PVVKAEWVEEGTHINAI 216 (322)
T ss_dssp CCCC-SS-CCBCGGGCCTTCEEEEC
T ss_pred eeCC-CC-ceecHHHcCCCeEEEEC
Confidence 6643 22 222 2457889998854
No 282
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.78 E-value=0.0058 Score=50.19 Aligned_cols=111 Identities=14% Similarity=0.125 Sum_probs=60.7
Q ss_pred CCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC-------CCcchhhhccCCCCCCcceeCCHHHHHhcc
Q 031216 29 TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-------VGEDIGMVCDMEQPLEIPVMSDLTMVLGSI 101 (163)
Q Consensus 29 ~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~-------~g~~~~~l~g~~~~~gi~v~~~l~ell~~~ 101 (163)
||-...++||+|+| .|.||..++..+.+ .+.++... .+.. .|.... ..+......+..+++++++
T Consensus 13 ~~~~~~~~kI~IiG-aGa~G~~~a~~L~~-~G~~V~l~-~~~~~~~~i~~~g~~~~-~~~~~~~~~~~~~~~~~~~---- 84 (318)
T 3hwr_A 13 ENLYFQGMKVAIMG-AGAVGCYYGGMLAR-AGHEVILI-ARPQHVQAIEATGLRLE-TQSFDEQVKVSASSDPSAV---- 84 (318)
T ss_dssp -------CEEEEES-CSHHHHHHHHHHHH-TTCEEEEE-CCHHHHHHHHHHCEEEE-CSSCEEEECCEEESCGGGG----
T ss_pred hhhhccCCcEEEEC-cCHHHHHHHHHHHH-CCCeEEEE-EcHhHHHHHHhCCeEEE-cCCCcEEEeeeeeCCHHHc----
Confidence 44456779999999 59999999999874 57787766 3211 011000 0000001233455677553
Q ss_pred cccCCccEEEEccCchhHHHHHHHH---HHcCCcEEEeCCCCCHHHHHHHHHHh
Q 031216 102 SQSKARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFC 152 (163)
Q Consensus 102 ~~~~~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigttg~~~e~~~~L~~~A 152 (163)
.++|+||.++.+....+.+... +..+..+|.-+.|++.++ .|.+.-
T Consensus 85 ---~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~--~l~~~~ 133 (318)
T 3hwr_A 85 ---QGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENAD--TLRSLL 133 (318)
T ss_dssp ---TTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHH--HHHHHC
T ss_pred ---CCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHH--HHHHHc
Confidence 3899999666555444444433 334666777777997642 444443
No 283
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.76 E-value=0.0058 Score=53.27 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCC-CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 32 PQS-NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 32 ~~~-~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
..+ |+||.|+|++|.+|+.+++.+.+ .+.+++++..+
T Consensus 143 ~~~k~m~VLVTGatG~IG~~l~~~L~~-~G~~V~~l~R~ 180 (516)
T 3oh8_A 143 FDGSPLTVAITGSRGLVGRALTAQLQT-GGHEVIQLVRK 180 (516)
T ss_dssp SCCCCCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECC
Confidence 344 78999999999999999999985 58898877654
No 284
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=96.75 E-value=0.0073 Score=49.00 Aligned_cols=34 Identities=29% Similarity=0.373 Sum_probs=28.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
.|++|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r 53 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLE-RGDKVVGIDN 53 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH-CCCEEEEEEC
Confidence 367999999999999999999985 5788887654
No 285
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=96.73 E-value=0.0079 Score=49.00 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=28.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
.|+||.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 59 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLK-LDQKVVGLDN 59 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHH-CCCEEEEEeC
Confidence 357999999999999999999985 4788887654
No 286
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.73 E-value=0.0075 Score=47.52 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=28.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
+|+||.|+|+ |.+|+.+++.+.+ .+.++.++..+
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~-~g~~V~~~~r~ 37 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAP-QGWRIIGTSRN 37 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGG-GTCEEEEEESC
T ss_pred CcCcEEEECC-cHHHHHHHHHHHH-CCCEEEEEEcC
Confidence 4689999997 9999999999985 48899877653
No 287
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.73 E-value=0.012 Score=45.22 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=26.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCc--EEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGM--EVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~--eLvgvid 68 (163)
++|.|+|++|.+|+.+++.+.+. +. +++++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEc
Confidence 58999999999999999999864 56 8876544
No 288
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.71 E-value=0.0029 Score=51.14 Aligned_cols=70 Identities=17% Similarity=0.248 Sum_probs=47.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
..||+|+| .|.||+.+++.+.+. +.++ .+++++. .++.++.. ..++.+++++++++. ++|+||.+|
T Consensus 129 ~~~v~iiG-aG~~g~aia~~L~~~-g~~V-~v~~r~~--~~~~~l~~---~~g~~~~~~~~~~~~------~aDiVi~at 194 (275)
T 2hk9_A 129 EKSILVLG-AGGASRAVIYALVKE-GAKV-FLWNRTK--EKAIKLAQ---KFPLEVVNSPEEVID------KVQVIVNTT 194 (275)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHH-TCEE-EEECSSH--HHHHHHTT---TSCEEECSCGGGTGG------GCSEEEECS
T ss_pred CCEEEEEC-chHHHHHHHHHHHHc-CCEE-EEEECCH--HHHHHHHH---HcCCeeehhHHhhhc------CCCEEEEeC
Confidence 46899999 599999999998865 5655 4667542 22233321 345556667777664 789999777
Q ss_pred Cchh
Q 031216 115 DAST 118 (163)
Q Consensus 115 ~p~~ 118 (163)
.+..
T Consensus 195 p~~~ 198 (275)
T 2hk9_A 195 SVGL 198 (275)
T ss_dssp STTS
T ss_pred CCCC
Confidence 5443
No 289
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=96.71 E-value=0.0073 Score=49.32 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=26.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARG-MEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid 68 (163)
++|.|+|++|.+|+.+++.+.+. + .+++++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDK-GITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHT-TCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCcEEEEEec
Confidence 68999999999999999999865 5 77776543
No 290
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.71 E-value=0.0073 Score=52.87 Aligned_cols=70 Identities=13% Similarity=0.222 Sum_probs=44.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhcc----CCC------------CCCcceeCCHHHH
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD----MEQ------------PLEIPVMSDLTMV 97 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g----~~~------------~~gi~v~~~l~el 97 (163)
+.+||+|+| +|+||..++..+. ..+.++++ +|++. ..+..+.. +.. ...+..++|++++
T Consensus 7 ~~~~I~VIG-~G~vG~~lA~~la-~~G~~V~~-~d~~~--~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a 81 (478)
T 2y0c_A 7 GSMNLTIIG-SGSVGLVTGACLA-DIGHDVFC-LDVDQ--AKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAA 81 (478)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHH
T ss_pred CCceEEEEC-cCHHHHHHHHHHH-hCCCEEEE-EECCH--HHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHH
Confidence 448999999 6999999999887 46788765 56421 11111100 000 1134567888877
Q ss_pred HhcccccCCccEEEEcc
Q 031216 98 LGSISQSKARAVVIDFT 114 (163)
Q Consensus 98 l~~~~~~~~~DVVIDfT 114 (163)
+. .+|+||.+.
T Consensus 82 ~~------~aDvviiaV 92 (478)
T 2y0c_A 82 VA------HGDVQFIAV 92 (478)
T ss_dssp HH------HCSEEEECC
T ss_pred hh------cCCEEEEEe
Confidence 75 799998554
No 291
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.71 E-value=0.0086 Score=47.36 Aligned_cols=94 Identities=18% Similarity=0.147 Sum_probs=54.0
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCC----cce-eCCHHHHHhcccccCCccEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE----IPV-MSDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~g----i~v-~~~l~ell~~~~~~~~~DVV 110 (163)
+||+|+| .|.||..++..+.+ .+.++.. ++++.. ....+... ...+ ..+ .++. +.+. ++|+|
T Consensus 1 m~i~iiG-~G~~G~~~a~~l~~-~g~~V~~-~~r~~~--~~~~l~~~-~~~~~~~~~~~~~~~~-~~~~------~~d~v 67 (291)
T 1ks9_A 1 MKITVLG-CGALGQLWLTALCK-QGHEVQG-WLRVPQ--PYCSVNLV-ETDGSIFNESLTANDP-DFLA------TSDLL 67 (291)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-ECSSCC--SEEEEEEE-CTTSCEEEEEEEESCH-HHHH------TCSEE
T ss_pred CeEEEEC-cCHHHHHHHHHHHh-CCCCEEE-EEcCcc--ceeeEEEE-cCCCceeeeeeeecCc-cccC------CCCEE
Confidence 4899999 59999999999874 5677764 564321 11111100 0011 111 3444 4443 79999
Q ss_pred EEccCchhHHHHHHHHH---HcCCcEEEeCCCCCH
Q 031216 111 IDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQL 142 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al---~~G~~vVigttg~~~ 142 (163)
|-++.+....+.+.... ..+..+|.-+.|++.
T Consensus 68 i~~v~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 68 LVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp EECSCGGGHHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred EEEecHHhHHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 96666665555444332 335667765667643
No 292
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.70 E-value=0.0034 Score=52.60 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=52.6
Q ss_pred ccccccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee
Q 031216 12 MHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM 91 (163)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~ 91 (163)
++...++++..+|-.. ....-.-.+|||+| +|+||+.+++.+.. -|+++.+ +|+... ....+ .+...+
T Consensus 118 ~~~~~~~~~~g~W~~~-~~~~l~g~tvGIIG-lG~IG~~vA~~l~~-~G~~V~~-~dr~~~--~~~~~------~~~~~~ 185 (324)
T 3hg7_A 118 LPLYREQQKQRLWQSH-PYQGLKGRTLLILG-TGSIGQHIAHTGKH-FGMKVLG-VSRSGR--ERAGF------DQVYQL 185 (324)
T ss_dssp HHHHHHHHHTTCCCCC-CCCCSTTCEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-ECSSCC--CCTTC------SEEECG
T ss_pred hHHHHHHHhhCCCcCC-CCcccccceEEEEE-ECHHHHHHHHHHHh-CCCEEEE-EcCChH--Hhhhh------hccccc
Confidence 3444455566665321 12223347899999 79999999999874 5899875 564321 11111 111224
Q ss_pred CCHHHHHhcccccCCccEEEEcc
Q 031216 92 SDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 92 ~~l~ell~~~~~~~~~DVVIDfT 114 (163)
.++++++. ..|+|+...
T Consensus 186 ~~l~ell~------~aDvV~l~l 202 (324)
T 3hg7_A 186 PALNKMLA------QADVIVSVL 202 (324)
T ss_dssp GGHHHHHH------TCSEEEECC
T ss_pred CCHHHHHh------hCCEEEEeC
Confidence 68999885 899988554
No 293
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=96.70 E-value=0.0087 Score=53.67 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=30.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
++++|.|+|++|.+|+.+++.+.+.++.+++++..+
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~ 349 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 349 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 568999999999999999999987768898876543
No 294
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.70 E-value=0.0029 Score=52.80 Aligned_cols=89 Identities=12% Similarity=0.061 Sum_probs=55.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| +|+||+.+++.+.. -++++. ++|+... .+... ..++. +.++++++. ..|+|+..
T Consensus 149 ~g~~vgIIG-~G~iG~~iA~~l~~-~G~~V~-~~d~~~~-~~~~~------~~g~~-~~~l~~~l~------~aDvVil~ 211 (334)
T 2dbq_A 149 YGKTIGIIG-LGRIGQAIAKRAKG-FNMRIL-YYSRTRK-EEVER------ELNAE-FKPLEDLLR------ESDFVVLA 211 (334)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSCC-HHHHH------HHCCE-ECCHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHh-CCCEEE-EECCCcc-hhhHh------hcCcc-cCCHHHHHh------hCCEEEEC
Confidence 357899999 69999999999874 688876 4665432 11111 12333 358988885 89999976
Q ss_pred cCchh-H---H-HHHHHHHHcCCcEEEeCCC
Q 031216 114 TDAST-V---Y-DNVKQATAFGMRSVVYVPH 139 (163)
Q Consensus 114 T~p~~-~---~-~~~~~al~~G~~vVigttg 139 (163)
..+.. . . +.....++.|.-+|.-.+|
T Consensus 212 vp~~~~t~~~i~~~~~~~mk~~ailIn~srg 242 (334)
T 2dbq_A 212 VPLTRETYHLINEERLKLMKKTAILINIARG 242 (334)
T ss_dssp CCCCTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred CCCChHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence 64332 1 1 2333445566655543334
No 295
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.69 E-value=0.0094 Score=47.73 Aligned_cols=95 Identities=19% Similarity=0.282 Sum_probs=56.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC-----Cc-------chhh-----h---c-cCCCCCCccee--
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV-----GE-------DIGM-----V---C-DMEQPLEIPVM-- 91 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~-----g~-------~~~~-----l---~-g~~~~~gi~v~-- 91 (163)
..||.|+| .|.+|..+++.+. ..|+.-+.++|.+.. ++ +++. + + .+.....+..+
T Consensus 28 ~~~VlvvG-~GglG~~va~~La-~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 105 (251)
T 1zud_1 28 DSQVLIIG-LGGLGTPAALYLA-GAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 105 (251)
T ss_dssp TCEEEEEC-CSTTHHHHHHHHH-HTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cCcEEEEc-cCHHHHHHHHHHH-HcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 36899999 5999999999987 568866678884321 10 0000 0 0 00000111111
Q ss_pred ----CCHHHHHhcccccCCccEEEEccCc-hhHHHHHHHHHHcCCcEEEeC
Q 031216 92 ----SDLTMVLGSISQSKARAVVIDFTDA-STVYDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 92 ----~~l~ell~~~~~~~~~DVVIDfT~p-~~~~~~~~~al~~G~~vVigt 137 (163)
+++++++. ++|+|||++.. +.-......|.+.++++|.+.
T Consensus 106 ~~~~~~~~~~~~------~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 106 RLTGEALKDAVA------RADVVLDCTDNMATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp CCCHHHHHHHHH------HCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCHHHHHHHHh------cCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 12344553 78999998843 333455577888999998654
No 296
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.69 E-value=0.017 Score=47.70 Aligned_cols=89 Identities=17% Similarity=0.131 Sum_probs=53.5
Q ss_pred CCCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee--CCHHHHHhcccccCCccE
Q 031216 33 QSNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAV 109 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~--~~l~ell~~~~~~~~~DV 109 (163)
+.|.||.++| .|.+|.. +++.+. ..|.++.+ .|..........+. ..|+.++ .+.+.+.. ..+|+
T Consensus 2 ~~~~~i~~iG-iGg~Gms~~A~~L~-~~G~~V~~-~D~~~~~~~~~~L~----~~gi~v~~g~~~~~l~~-----~~~d~ 69 (326)
T 3eag_A 2 NAMKHIHIIG-IGGTFMGGLAAIAK-EAGFEVSG-CDAKMYPPMSTQLE----ALGIDVYEGFDAAQLDE-----FKADV 69 (326)
T ss_dssp -CCCEEEEES-CCSHHHHHHHHHHH-HTTCEEEE-EESSCCTTHHHHHH----HTTCEEEESCCGGGGGS-----CCCSE
T ss_pred CCCcEEEEEE-ECHHHHHHHHHHHH-hCCCEEEE-EcCCCCcHHHHHHH----hCCCEEECCCCHHHcCC-----CCCCE
Confidence 4578999999 5999986 666654 67999874 67532111112222 3466665 34444331 16898
Q ss_pred EEEcc--CchhHHHHHHHHHHcCCcEEE
Q 031216 110 VIDFT--DASTVYDNVKQATAFGMRSVV 135 (163)
Q Consensus 110 VIDfT--~p~~~~~~~~~al~~G~~vVi 135 (163)
|| .| .|.. .+.+..|.++|++++.
T Consensus 70 vV-~Spgi~~~-~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 70 YV-IGNVAKRG-MDVVEAILNLGLPYIS 95 (326)
T ss_dssp EE-ECTTCCTT-CHHHHHHHHTTCCEEE
T ss_pred EE-ECCCcCCC-CHHHHHHHHcCCcEEe
Confidence 88 44 2333 3445677888888765
No 297
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.68 E-value=0.018 Score=41.45 Aligned_cols=107 Identities=7% Similarity=0.033 Sum_probs=56.8
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-eCCH--HHHHhcccccCCccE
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDL--TMVLGSISQSKARAV 109 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-~~~l--~ell~~~~~~~~~DV 109 (163)
..+-+|+|+| .|++|+.+++.+.+ .+.++++ +|++. .....+. ..++.+ +.|. ++.+.+. .-.++|+
T Consensus 5 ~~~~~viIiG-~G~~G~~la~~L~~-~g~~v~v-id~~~--~~~~~~~----~~g~~~i~gd~~~~~~l~~a-~i~~ad~ 74 (140)
T 3fwz_A 5 DICNHALLVG-YGRVGSLLGEKLLA-SDIPLVV-IETSR--TRVDELR----ERGVRAVLGNAANEEIMQLA-HLECAKW 74 (140)
T ss_dssp CCCSCEEEEC-CSHHHHHHHHHHHH-TTCCEEE-EESCH--HHHHHHH----HTTCEEEESCTTSHHHHHHT-TGGGCSE
T ss_pred cCCCCEEEEC-cCHHHHHHHHHHHH-CCCCEEE-EECCH--HHHHHHH----HcCCCEEECCCCCHHHHHhc-CcccCCE
Confidence 3346899999 69999999999874 6788875 56432 1122221 223332 2222 1222210 0147899
Q ss_pred EEEccCchhHH-HHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHH
Q 031216 110 VIDFTDASTVY-DNVKQATAF--GMRSVVYVPHIQLETVSALSAF 151 (163)
Q Consensus 110 VIDfT~p~~~~-~~~~~al~~--G~~vVigttg~~~e~~~~L~~~ 151 (163)
||.++..+... ..+..+.+. ++++|.- ..+++..+.|.++
T Consensus 75 vi~~~~~~~~n~~~~~~a~~~~~~~~iiar--~~~~~~~~~l~~~ 117 (140)
T 3fwz_A 75 LILTIPNGYEAGEIVASARAKNPDIEIIAR--AHYDDEVAYITER 117 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEEE--ESSHHHHHHHHHT
T ss_pred EEEECCChHHHHHHHHHHHHHCCCCeEEEE--ECCHHHHHHHHHC
Confidence 88555433322 233333332 4555542 2456666666654
No 298
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=96.68 E-value=0.015 Score=47.29 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=28.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
|||.|+|++|.+|+.+++.+.+..+.+++++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 489999999999999999998766889887643
No 299
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=96.67 E-value=0.0077 Score=47.71 Aligned_cols=31 Identities=23% Similarity=0.353 Sum_probs=25.8
Q ss_pred eEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEe
Q 031216 37 KVIINGAVKEIGRAAVIAVTKARG-MEVAGAID 68 (163)
Q Consensus 37 rV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid 68 (163)
||.|+|++|.+|+.+++.+.+. + .+++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK-GITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHC-CCcEEEEEcc
Confidence 5899999999999999999864 5 77776543
No 300
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=96.67 E-value=0.0067 Score=48.85 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=27.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
|+||.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r 33 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALS-QGIDLIVFDN 33 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHh-CCCEEEEEeC
Confidence 57899999999999999999985 6889887643
No 301
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=96.67 E-value=0.0082 Score=49.34 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=28.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|.|+|++|.+|+.+++.+.+ .+.+++++..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-KGYEVHGIVRR 57 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECC
T ss_pred cEEEEECCCchHHHHHHHHHHH-CCCEEEEEECC
Confidence 6899999999999999999985 57898876543
No 302
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=96.66 E-value=0.0049 Score=50.95 Aligned_cols=85 Identities=15% Similarity=0.086 Sum_probs=53.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| .|+||+.+++.+.. -++++. ++|+... .+... ..++.. .++++++. ..|+|+..
T Consensus 141 ~g~~vgIiG-~G~IG~~~A~~l~~-~G~~V~-~~d~~~~-~~~~~------~~g~~~-~~l~ell~------~aDvV~l~ 203 (307)
T 1wwk_A 141 EGKTIGIIG-FGRIGYQVAKIANA-LGMNIL-LYDPYPN-EERAK------EVNGKF-VDLETLLK------ESDVVTIH 203 (307)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSCC-HHHHH------HTTCEE-CCHHHHHH------HCSEEEEC
T ss_pred CCceEEEEc-cCHHHHHHHHHHHH-CCCEEE-EECCCCC-hhhHh------hcCccc-cCHHHHHh------hCCEEEEe
Confidence 347899999 79999999999874 578876 4665431 11111 234433 48999885 89999966
Q ss_pred cCchh-H---H-HHHHHHHHcCCcEEE
Q 031216 114 TDAST-V---Y-DNVKQATAFGMRSVV 135 (163)
Q Consensus 114 T~p~~-~---~-~~~~~al~~G~~vVi 135 (163)
.+... . . +.....++.|.-+|-
T Consensus 204 ~p~~~~t~~li~~~~l~~mk~ga~lin 230 (307)
T 1wwk_A 204 VPLVESTYHLINEERLKLMKKTAILIN 230 (307)
T ss_dssp CCCSTTTTTCBCHHHHHHSCTTCEEEE
T ss_pred cCCChHHhhhcCHHHHhcCCCCeEEEE
Confidence 53221 1 1 233345566665554
No 303
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.63 E-value=0.002 Score=51.52 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=28.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
|||.|+|++|.+|+.+++.+. ..|.+++++..+
T Consensus 1 MkILVTGatGfIG~~L~~~L~-~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLN-ARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECC
Confidence 689999999999999999987 468999987653
No 304
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.63 E-value=0.0026 Score=52.98 Aligned_cols=84 Identities=13% Similarity=0.087 Sum_probs=50.6
Q ss_pred cccccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeC
Q 031216 13 HHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS 92 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~ 92 (163)
+...++++..+|-.. ....-.-.+|+|+| .|+||+.+++.+. .-|+++.+ +|+... ....+. . .....
T Consensus 118 ~~~~~~~~~g~W~~~-~~~~l~g~tvGIiG-~G~IG~~vA~~l~-~~G~~V~~-~dr~~~--~~~~~~----~--~~~~~ 185 (315)
T 3pp8_A 118 DDYQALKNQALWKPL-PEYTREEFSVGIMG-AGVLGAKVAESLQ-AWGFPLRC-WSRSRK--SWPGVE----S--YVGRE 185 (315)
T ss_dssp HHHHHHHHTTCCCCC-CCCCSTTCCEEEEC-CSHHHHHHHHHHH-TTTCCEEE-EESSCC--CCTTCE----E--EESHH
T ss_pred hHHHHHHHhcccCCC-CCCCcCCCEEEEEe-eCHHHHHHHHHHH-HCCCEEEE-EcCCch--hhhhhh----h--hcccC
Confidence 333445555555322 22223347899999 7999999999987 56899886 454321 111100 0 00125
Q ss_pred CHHHHHhcccccCCccEEEEcc
Q 031216 93 DLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 93 ~l~ell~~~~~~~~~DVVIDfT 114 (163)
++++++. ..|+|+...
T Consensus 186 ~l~ell~------~aDiV~l~~ 201 (315)
T 3pp8_A 186 ELRAFLN------QTRVLINLL 201 (315)
T ss_dssp HHHHHHH------TCSEEEECC
T ss_pred CHHHHHh------hCCEEEEec
Confidence 8889885 899988554
No 305
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.61 E-value=0.009 Score=50.56 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=60.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC----------------CCcc----hhh-hccCCCCCCcceeC-
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----------------VGED----IGM-VCDMEQPLEIPVMS- 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~----------------~g~~----~~~-l~g~~~~~gi~v~~- 92 (163)
..||.|+| .|..|..+++.+. ..|+.=..++|.+. .|+. +.+ +..+.....+..+.
T Consensus 34 ~~~VlIvG-aGGlGs~va~~La-~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~ 111 (340)
T 3rui_A 34 NTKVLLLG-AGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 111 (340)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-HcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEec
Confidence 47899999 5999999999987 56887777888431 0111 000 00000011111111
Q ss_pred --------------------CHHHHHhcccccCCccEEEEccC-chhHHHHHHHHHHcCCcEEEeCCCC
Q 031216 93 --------------------DLTMVLGSISQSKARAVVIDFTD-ASTVYDNVKQATAFGMRSVVYVPHI 140 (163)
Q Consensus 93 --------------------~l~ell~~~~~~~~~DVVIDfT~-p~~~~~~~~~al~~G~~vVigttg~ 140 (163)
++++++. ++|+|||++. ++.-...-..|.++|+++|.+..|+
T Consensus 112 ~i~~~g~~~~~~~~~~~~~~~l~~~l~------~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa~G~ 174 (340)
T 3rui_A 112 SIPMIGHKLVNEEAQHKDFDRLRALIK------EHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGF 174 (340)
T ss_dssp CCCCTTSCCSCHHHHHHHHHHHHHHHH------HCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEEECS
T ss_pred cccccCcccchhhhhcCCHHHHHhhhc------cCCEEEecCCCHHHHHHHHHHHHHcCCcEEEeeecc
Confidence 2344554 7999999984 4444566688999999998765444
No 306
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=96.61 E-value=0.03 Score=45.05 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=27.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhc--CC---cEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKA--RG---MEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~--~~---~eLvgvid 68 (163)
|||.|+|++|.+|+.+++.+.+. ++ .+++++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 48999999999999999999864 26 88887644
No 307
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=95.63 E-value=0.00033 Score=54.52 Aligned_cols=92 Identities=11% Similarity=0.056 Sum_probs=53.9
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
.+.+||+|+| .|.||+.+++.+.+ .+.++. ++++... ...+. ..++..+ ++++++. .+|+||-
T Consensus 17 ~~~~~I~iIG-~G~mG~~la~~L~~-~G~~V~-~~~r~~~---~~~~~----~~g~~~~-~~~~~~~------~aDvVil 79 (201)
T 2yjz_A 17 EKQGVVCIFG-TGDFGKSLGLKMLQ-CGYSVV-FGSRNPQ---VSSLL----PRGAEVL-CYSEAAS------RSDVIVL 79 (201)
Confidence 3457999999 69999999999874 467765 3554321 11221 2344444 6777664 8999996
Q ss_pred ccCchhHHHHHH-HHHHcCCcEEEeCCCCC
Q 031216 113 FTDASTVYDNVK-QATAFGMRSVVYVPHIQ 141 (163)
Q Consensus 113 fT~p~~~~~~~~-~al~~G~~vVigttg~~ 141 (163)
++.|....+.+. .....|.-+|.-.+|.+
T Consensus 80 av~~~~~~~v~~l~~~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 80 AVHREHYDFLAELADSLKGRVLIDVSNNQK 109 (201)
Confidence 665543333221 11234555554444653
No 308
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=96.57 E-value=0.027 Score=45.24 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=27.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcC-CcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~-~~eLvgvid 68 (163)
+||.|+|++|.+|+.+++.+.+.. +.+++++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 589999999999999999998764 588887543
No 309
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.56 E-value=0.013 Score=47.37 Aligned_cols=33 Identities=15% Similarity=0.298 Sum_probs=28.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
.++|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~-~g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLP-QGHEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGG-GTCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEEC
Confidence 36899999999999999999985 5789887654
No 310
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=96.56 E-value=0.0038 Score=51.46 Aligned_cols=72 Identities=13% Similarity=0.196 Sum_probs=48.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
|||.|+|++|.+|+.+++.+.+....+++. +|+.. + .+++++++. ++|+||.+..
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~-~d~~~---d---------------~~~l~~~~~------~~d~Vih~a~ 55 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFE-VHRQT---K---------------EEELESALL------KADFIVHLAG 55 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEE-CCTTC---C---------------HHHHHHHHH------HCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEE-ECCCC---C---------------HHHHHHHhc------cCCEEEECCc
Confidence 589999999999999999998765547764 34310 0 134566664 7899998652
Q ss_pred c--------------hhHHHHHHHHHHcCCc
Q 031216 116 A--------------STVYDNVKQATAFGMR 132 (163)
Q Consensus 116 p--------------~~~~~~~~~al~~G~~ 132 (163)
+ ......+..|.+.|+.
T Consensus 56 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 86 (369)
T 3st7_A 56 VNRPEHDKEFSLGNVSYLDHVLDILTRNTKK 86 (369)
T ss_dssp SBCTTCSTTCSSSCCBHHHHHHHHHTTCSSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1 1234566777777744
No 311
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.55 E-value=0.0044 Score=53.87 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=72.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhccCCCCCCc------------ceeCCHHHH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLEI------------PVMSDLTMV 97 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-----~~g~~~~~l~g~~~~~gi------------~v~~~l~el 97 (163)
..+|+|.| .|.+|+..++.+. ..+.+++++.|+. +.|-|..++.......+. ..+.+.+++
T Consensus 210 gk~vaVqG-~GnVG~~aa~~L~-e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~ 287 (421)
T 1v9l_A 210 GKTVAIQG-MGNVGRWTAYWLE-KMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAI 287 (421)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-TTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGG
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchhh
Confidence 37899999 6999999998887 5699999999962 445555555433212221 112144666
Q ss_pred HhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEc
Q 031216 98 LGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 98 l~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
+. .++|+++-+..++.. .+++. +-+..+|+|-. .++++..+ .-++.+|++.
T Consensus 288 ~~-----~~~Dil~P~A~~~~I~~~~a~---~l~ak~V~EgAN~p~t~~a~~----~l~~~Gi~~~ 341 (421)
T 1v9l_A 288 FK-----LDVDIFVPAAIENVIRGDNAG---LVKARLVVEGANGPTTPEAER----ILYERGVVVV 341 (421)
T ss_dssp GG-----CCCSEEEECSCSSCBCTTTTT---TCCCSEEECCSSSCBCHHHHH----HHHTTTCEEE
T ss_pred hc-----CCccEEEecCcCCccchhhHH---HcCceEEEecCCCcCCHHHHH----HHHHCCCEEe
Confidence 75 599999987765544 23333 33889998776 45655433 3345567664
No 312
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.55 E-value=0.0031 Score=53.66 Aligned_cols=110 Identities=8% Similarity=0.124 Sum_probs=66.3
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
.-.+|+|+| .|+||+.+++.+. ..+++++ +.|++. .++.++.. ..+.. +-+.++++. .++|+++-+
T Consensus 172 ~GktV~V~G-~G~VG~~~A~~L~-~~GakVv-v~D~~~--~~l~~~a~---~~ga~-~v~~~~ll~-----~~~DIvip~ 237 (364)
T 1leh_A 172 EGLAVSVQG-LGNVAKALCKKLN-TEGAKLV-VTDVNK--AAVSAAVA---EEGAD-AVAPNAIYG-----VTCDIFAPC 237 (364)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSCH--HHHHHHHH---HHCCE-ECCGGGTTT-----CCCSEEEEC
T ss_pred CcCEEEEEC-chHHHHHHHHHHH-HCCCEEE-EEcCCH--HHHHHHHH---HcCCE-EEChHHHhc-----cCCcEeecc
Confidence 347899999 6999999999987 5689988 888642 12222221 11222 235566665 489999866
Q ss_pred cCchhH-HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeEEcC
Q 031216 114 TDASTV-YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 114 T~p~~~-~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
...+.. .+.+. .-|..+|++.+.... ..++..++.++.+|++.+
T Consensus 238 a~~~~I~~~~~~---~lg~~iV~e~An~p~-t~~ea~~~L~~~Gi~~~P 282 (364)
T 1leh_A 238 ALGAVLNDFTIP---QLKAKVIAGSADNQL-KDPRHGKYLHELGIVYAP 282 (364)
T ss_dssp SCSCCBSTTHHH---HCCCSEECCSCSCCB-SSHHHHHHHHHHTCEECC
T ss_pred chHHHhCHHHHH---hCCCcEEEeCCCCCc-ccHHHHHHHHhCCCEEec
Confidence 544433 23333 237888887773321 111244556667777654
No 313
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=96.54 E-value=0.012 Score=47.50 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=27.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+++|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 34 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLE-AGYLPVVIDN 34 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHH-TTCCEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEec
Confidence 36899999999999999999885 5788887643
No 314
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=96.53 E-value=0.0082 Score=49.87 Aligned_cols=74 Identities=16% Similarity=0.103 Sum_probs=43.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhccCCCCCCcce---eCCHHHHHhcccccCCccE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPV---MSDLTMVLGSISQSKARAV 109 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid~~~~g~~~~~l~g~~~~~gi~v---~~~l~ell~~~~~~~~~DV 109 (163)
+++||+|+||+|.+|..++..+....- .+|+. +|.......+.++.....+..+.. ++|+++++. .+|+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l-~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~------gaDv 79 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHL-YDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALT------GMDL 79 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEE-EESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHT------TCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEE-EeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcC------CCCE
Confidence 468999999889999999988875421 46654 784321001112221100112222 236777774 8999
Q ss_pred EEEcc
Q 031216 110 VIDFT 114 (163)
Q Consensus 110 VIDfT 114 (163)
||...
T Consensus 80 Vi~~a 84 (326)
T 1smk_A 80 IIVPA 84 (326)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99654
No 315
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.52 E-value=0.0024 Score=55.50 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=62.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC----------CCCcchhhhccCCCCCC-cc-----eeCCHHHHH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH----------SVGEDIGMVCDMEQPLE-IP-----VMSDLTMVL 98 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~----------~~g~~~~~l~g~~~~~g-i~-----v~~~l~ell 98 (163)
..||+|.| .|++|+..++.+. ..+.+++++.|+. ..|.|+.++.......+ +. -+-+.++++
T Consensus 212 g~~vaVqG-~GnVG~~~a~~L~-~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~~~~ 289 (421)
T 2yfq_A 212 DAKIAVQG-FGNVGTFTVKNIE-RQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDEEFW 289 (421)
T ss_dssp GSCEEEEC-CSHHHHHHHHHHH-HTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC----------------
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCccchh
Confidence 47899999 7999999999887 5789999999965 23444443322110000 00 011335556
Q ss_pred hcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEc
Q 031216 99 GSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 99 ~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
. .++|+++-++.++.. .+.+.. -+..+|++.. .++++..+.|. +.+|++.
T Consensus 290 ~-----~~~DIliP~A~~n~i~~~~A~~---l~ak~VvEgAN~P~t~ea~~il~----~~GI~~~ 342 (421)
T 2yfq_A 290 T-----KEYDIIVPAALENVITGERAKT---INAKLVCEAANGPTTPEGDKVLT----ERGINLT 342 (421)
T ss_dssp ----------CEEECSCSSCSCHHHHTT---CCCSEEECCSSSCSCHHHHHHHH----HHTCEEE
T ss_pred c-----CCccEEEEcCCcCcCCcccHHH---cCCeEEEeCCccccCHHHHHHHH----HCCCEEE
Confidence 5 589999988876554 445543 3778887665 45665444443 5677664
No 316
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=96.52 E-value=0.0078 Score=46.89 Aligned_cols=86 Identities=19% Similarity=0.247 Sum_probs=51.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
+||.|+|++|.+|+.+++.+.+ +.+++++..+... . .+ + ..++.-.++++++++. .++|+||.+..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~--g~~V~~~~r~~~~-~-~~-~-----~~Dl~~~~~~~~~~~~----~~~d~vi~~a~ 66 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE--RHEVIKVYNSSEI-Q-GG-Y-----KLDLTDFPRLEDFIIK----KRPDVIINAAA 66 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT--TSCEEEEESSSCC-T-TC-E-----ECCTTSHHHHHHHHHH----HCCSEEEECCC
T ss_pred CEEEEECCCChhHHHHHHHHhc--CCeEEEecCCCcC-C-CC-c-----eeccCCHHHHHHHHHh----cCCCEEEECCc
Confidence 4799999999999999999973 6888865443211 0 00 1 1111111344555542 25999998763
Q ss_pred ch------------------hHHHHHHHHHHcCCcEEE
Q 031216 116 AS------------------TVYDNVKQATAFGMRSVV 135 (163)
Q Consensus 116 p~------------------~~~~~~~~al~~G~~vVi 135 (163)
.. .....++.+.+.|.++|.
T Consensus 67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~ 104 (273)
T 2ggs_A 67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVH 104 (273)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEE
T ss_pred ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEE
Confidence 21 123455667777777663
No 317
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.52 E-value=0.0045 Score=50.77 Aligned_cols=111 Identities=14% Similarity=0.155 Sum_probs=63.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccC--CC----CC---CcceeCCHHHHHhcccccC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM--EQ----PL---EIPVMSDLTMVLGSISQSK 105 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~--~~----~~---gi~v~~~l~ell~~~~~~~ 105 (163)
++||+|+| .|.||..++..+.+ .+.++.. +++... ..+.+ .|+ .. .. .+.++++++++. .
T Consensus 2 ~mkI~IiG-aGaiG~~~a~~L~~-~g~~V~~-~~r~~~-~~i~~-~Gl~~~~~~~g~~~~~~~~~~~~~~~~~------~ 70 (320)
T 3i83_A 2 SLNILVIG-TGAIGSFYGALLAK-TGHCVSV-VSRSDY-ETVKA-KGIRIRSATLGDYTFRPAAVVRSAAELE------T 70 (320)
T ss_dssp -CEEEEES-CCHHHHHHHHHHHH-TTCEEEE-ECSTTH-HHHHH-HCEEEEETTTCCEEECCSCEESCGGGCS------S
T ss_pred CCEEEEEC-cCHHHHHHHHHHHh-CCCeEEE-EeCChH-HHHHh-CCcEEeecCCCcEEEeeeeeECCHHHcC------C
Confidence 47999999 59999999999875 5777764 454321 11111 010 00 00 234567777654 3
Q ss_pred CccEEEEccCchhHHHH---HHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 106 ARAVVIDFTDASTVYDN---VKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~---~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
++|+||-++.+....+. +...+..+..+|.-.-|+..+ +.|.+.-....|+
T Consensus 71 ~~DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~--~~l~~~~~~~~vl 124 (320)
T 3i83_A 71 KPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE--PEVAAAFPDNEVI 124 (320)
T ss_dssp CCSEEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS--HHHHHHSTTSCEE
T ss_pred CCCEEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH--HHHHHHCCCCcEE
Confidence 89999966655444333 333344566777767788633 3344444333443
No 318
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=96.48 E-value=0.0057 Score=48.02 Aligned_cols=33 Identities=18% Similarity=0.116 Sum_probs=27.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
|.+|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r 34 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGT-LAHEVRLSDI 34 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGG-TEEEEEECCS
T ss_pred CceEEEECCCCHHHHHHHHHHHh-CCCEEEEEeC
Confidence 46899999999999999999875 4788776543
No 319
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.48 E-value=0.012 Score=51.90 Aligned_cols=114 Identities=11% Similarity=0.129 Sum_probs=76.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-----CCCCc---chhhhccCCCC------------CCcceeCCH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-----HSVGE---DIGMVCDMEQP------------LEIPVMSDL 94 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-----~~~g~---~~~~l~g~~~~------------~gi~v~~~l 94 (163)
..||+|-| .|++|+..++.+. ..+.+++++.|+ .+.|- ++..+...... .+.... +.
T Consensus 252 g~~vaVqG-~GnVG~~~a~~L~-~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v-~~ 328 (470)
T 2bma_A 252 KQTAVVSG-SGNVALYCVQKLL-HLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF-PN 328 (470)
T ss_dssp GCEEEEEC-SSHHHHHHHHHHH-HTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC-SS
T ss_pred CCEEEEEC-CcHHHHHHHHHHH-HCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe-cC
Confidence 47899999 7999999999887 469999999995 24565 33222211000 022222 22
Q ss_pred HHHHhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEc
Q 031216 95 TMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 95 ~ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
++++. .++|+++-+..+... .+++...++.+..+|+|-. .++++.. +.-++.+|++.
T Consensus 329 ~~~~~-----~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~----~~L~~rGIl~~ 388 (470)
T 2bma_A 329 EKPWG-----VPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDAI----NLFKSNNIIYC 388 (470)
T ss_dssp CCTTS-----SCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHH----HHHHHTTCEEE
T ss_pred cCeee-----cCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHH----HHHHHCCcEEE
Confidence 45554 599999988876665 6788888889999999876 3566653 34455677765
No 320
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.48 E-value=0.0081 Score=49.50 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=27.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGM-EVAGAI 67 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvi 67 (163)
.+|.|+|++|.+|+.+++.+.+.++. +++++.
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~ 54 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS 54 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE
Confidence 68999999999999999999876466 877654
No 321
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.47 E-value=0.0044 Score=50.41 Aligned_cols=86 Identities=16% Similarity=0.145 Sum_probs=52.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce--eCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v--~~~l~ell~~~~~~~~~DVVI 111 (163)
...+|+|+| .|+||+.+++.+.. -++++. ++|+.. .+...+. ..++.. +.++++++. .+|+|+
T Consensus 154 ~g~~v~IiG-~G~iG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~l~~~l~------~aDvVi 218 (293)
T 3d4o_A 154 HGANVAVLG-LGRVGMSVARKFAA-LGAKVK-VGARES--DLLARIA----EMGMEPFHISKAAQELR------DVDVCI 218 (293)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EEESSH--HHHHHHH----HTTSEEEEGGGHHHHTT------TCSEEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHh-CCCEEE-EEECCH--HHHHHHH----HCCCeecChhhHHHHhc------CCCEEE
Confidence 347899999 69999999999874 577766 566532 1111111 123322 357888774 899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEE
Q 031216 112 DFTDASTVYDNVKQATAFGMRSV 134 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vV 134 (163)
..+.+....+.....++.|.-+|
T Consensus 219 ~~~p~~~i~~~~l~~mk~~~~li 241 (293)
T 3d4o_A 219 NTIPALVVTANVLAEMPSHTFVI 241 (293)
T ss_dssp ECCSSCCBCHHHHHHSCTTCEEE
T ss_pred ECCChHHhCHHHHHhcCCCCEEE
Confidence 77754333233334455555444
No 322
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.46 E-value=0.0077 Score=49.69 Aligned_cols=96 Identities=16% Similarity=0.216 Sum_probs=54.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhcc-CCC--CCCcceeCCHHHHHhcccccCCccEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-MEQ--PLEIPVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g-~~~--~~gi~v~~~l~ell~~~~~~~~~DVVID 112 (163)
.||+|+| .|.||..++..+. .+++++ ++|++.. .+..... +.. -.++...+|+++ +. ++|+||.
T Consensus 13 ~~V~vIG-~G~MG~~iA~~la--aG~~V~-v~d~~~~--~~~~~~~~l~~~~~~~i~~~~~~~~-~~------~aDlVie 79 (293)
T 1zej_A 13 MKVFVIG-AGLMGRGIAIAIA--SKHEVV-LQDVSEK--ALEAAREQIPEELLSKIEFTTTLEK-VK------DCDIVME 79 (293)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH--TTSEEE-EECSCHH--HHHHHHHHSCGGGGGGEEEESSCTT-GG------GCSEEEE
T ss_pred CeEEEEe-eCHHHHHHHHHHH--cCCEEE-EEECCHH--HHHHHHHHHHHHHhCCeEEeCCHHH-Hc------CCCEEEE
Confidence 6899999 6999999999987 699876 5675421 1111110 000 014556678876 43 8999996
Q ss_pred ccCchhH--HHHH-HHHHH-cCCcEEEeCCCCCHHHH
Q 031216 113 FTDASTV--YDNV-KQATA-FGMRSVVYVPHIQLETV 145 (163)
Q Consensus 113 fT~p~~~--~~~~-~~al~-~G~~vVigttg~~~e~~ 145 (163)
+. |+.. ...+ ..... .|.-+++-|+.++..+.
T Consensus 80 av-pe~~~vk~~l~~~l~~~~~~IlasntSti~~~~~ 115 (293)
T 1zej_A 80 AV-FEDLNTKVEVLREVERLTNAPLCSNTSVISVDDI 115 (293)
T ss_dssp CC-CSCHHHHHHHHHHHHTTCCSCEEECCSSSCHHHH
T ss_pred cC-cCCHHHHHHHHHHHhcCCCCEEEEECCCcCHHHH
Confidence 55 3332 2222 22111 34433344556776543
No 323
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.45 E-value=0.0051 Score=52.92 Aligned_cols=67 Identities=15% Similarity=0.091 Sum_probs=45.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| .|+||+.+++.+.. -++++. ++|+.....+... ..++..+.++++++. ..|+|+..
T Consensus 190 ~gktvGIIG-lG~IG~~vA~~l~a-~G~~V~-~~d~~~~~~~~~~------~~G~~~~~~l~ell~------~aDvV~l~ 254 (393)
T 2nac_A 190 EAMHVGTVA-AGRIGLAVLRRLAP-FDVHLH-YTDRHRLPESVEK------ELNLTWHATREDMYP------VCDVVTLN 254 (393)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGG-GTCEEE-EECSSCCCHHHHH------HHTCEECSSHHHHGG------GCSEEEEC
T ss_pred CCCEEEEEe-ECHHHHHHHHHHHh-CCCEEE-EEcCCccchhhHh------hcCceecCCHHHHHh------cCCEEEEe
Confidence 346899999 79999999999874 578876 4565321111111 224444568999885 89999966
Q ss_pred cC
Q 031216 114 TD 115 (163)
Q Consensus 114 T~ 115 (163)
..
T Consensus 255 ~P 256 (393)
T 2nac_A 255 CP 256 (393)
T ss_dssp SC
T ss_pred cC
Confidence 53
No 324
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=96.45 E-value=0.011 Score=47.02 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=28.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+++||.|+|++|.+|+.+++.+.+. +.+++++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS-GEEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-TCCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC-CCEEEEEec
Confidence 4679999999999999999999864 788887654
No 325
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.43 E-value=0.017 Score=40.37 Aligned_cols=96 Identities=14% Similarity=0.247 Sum_probs=50.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-eeC---CHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMS---DLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~~---~l~ell~~~~~~~~~DVV 110 (163)
.+||+|+|+ |++|+.+++.+.+ .+.+++ ++|++. .....+.. ..++. +.. +.+.+... .-.++|+|
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~-~g~~v~-~~d~~~--~~~~~~~~---~~~~~~~~~d~~~~~~l~~~--~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSE-KGHDIV-LIDIDK--DICKKASA---EIDALVINGDCTKIKTLEDA--GIEDADMY 73 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHH-TTCEEE-EEESCH--HHHHHHHH---HCSSEEEESCTTSHHHHHHT--TTTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCeEE-EEECCH--HHHHHHHH---hcCcEEEEcCCCCHHHHHHc--CcccCCEE
Confidence 369999995 9999999999875 578876 456432 11222210 11332 222 33332210 01479999
Q ss_pred EEccCchhHHHH-HHHHHHcC-CcEEEeCCCC
Q 031216 111 IDFTDASTVYDN-VKQATAFG-MRSVVYVPHI 140 (163)
Q Consensus 111 IDfT~p~~~~~~-~~~al~~G-~~vVigttg~ 140 (163)
|.++........ ...+.+.+ .++|+-+.+.
T Consensus 74 i~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 74 IAVTGKEEVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred EEeeCCchHHHHHHHHHHHcCCCEEEEEecCH
Confidence 977654433332 23444445 3566544443
No 326
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.42 E-value=0.011 Score=51.48 Aligned_cols=114 Identities=16% Similarity=0.219 Sum_probs=74.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhccCCCCCC-c----ceeCCHHHHHhcccc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLE-I----PVMSDLTMVLGSISQ 103 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-----~~g~~~~~l~g~~~~~g-i----~v~~~l~ell~~~~~ 103 (163)
+..||+|.| .|++|+..++.+.+ .+.+++++.|+. +.|-|..++.......+ + .-+-+.++++.
T Consensus 220 ~g~~vaVqG-~GnVG~~aa~~l~e-~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~---- 293 (424)
T 3k92_A 220 QNARIIIQG-FGNAGSFLAKFMHD-AGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLE---- 293 (424)
T ss_dssp GGCEEEEEC-CSHHHHHHHHHHHH-HTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHH----
T ss_pred ccCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCcccee----
Confidence 347899999 69999999998874 599999999953 45666665543321222 1 11225578886
Q ss_pred cCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEcC
Q 031216 104 SKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 104 ~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
.++|+++-++..... .+++.. -+..+|+|-. .++++..+. -++.+|++.+
T Consensus 294 -~~~DIliPcA~~n~I~~~~a~~---l~ak~V~EgAN~p~t~eA~~i----L~~rGI~~~P 346 (424)
T 3k92_A 294 -KDCDILVPAAISNQITAKNAHN---IQASIVVERANGPTTIDATKI----LNERGVLLVP 346 (424)
T ss_dssp -SCCSEEEECSCSSCBCTTTGGG---CCCSEEECCSSSCBCHHHHHH----HHHTTCEEEC
T ss_pred -ccccEEeecCcccccChhhHhh---cCceEEEcCCCCCCCHHHHHH----HHHCCCEEEC
Confidence 599999987754433 334432 2888888776 345554333 3556777753
No 327
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.42 E-value=0.0034 Score=51.17 Aligned_cols=86 Identities=10% Similarity=0.099 Sum_probs=52.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce--eCCHHHHHhcccccCCccEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v--~~~l~ell~~~~~~~~~DVVI 111 (163)
...+|+|+| .|+||+.+++.+.. -++++. ++|+.. .+...+. ..++.. +.++++++. .+|+|+
T Consensus 156 ~g~~v~IiG-~G~iG~~~a~~l~~-~G~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~l~~~l~------~aDvVi 220 (300)
T 2rir_A 156 HGSQVAVLG-LGRTGMTIARTFAA-LGANVK-VGARSS--AHLARIT----EMGLVPFHTDELKEHVK------DIDICI 220 (300)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EEESSH--HHHHHHH----HTTCEEEEGGGHHHHST------TCSEEE
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHH-CCCEEE-EEECCH--HHHHHHH----HCCCeEEchhhHHHHhh------CCCEEE
Confidence 457899999 69999999999874 578866 466542 1112111 123322 367888774 899999
Q ss_pred EccCchhHHHHHHHHHHcCCcEE
Q 031216 112 DFTDASTVYDNVKQATAFGMRSV 134 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vV 134 (163)
..+.+....+.....++.|.-+|
T Consensus 221 ~~~p~~~i~~~~~~~mk~g~~li 243 (300)
T 2rir_A 221 NTIPSMILNQTVLSSMTPKTLIL 243 (300)
T ss_dssp ECCSSCCBCHHHHTTSCTTCEEE
T ss_pred ECCChhhhCHHHHHhCCCCCEEE
Confidence 77765433232333345554444
No 328
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.41 E-value=0.011 Score=48.29 Aligned_cols=110 Identities=11% Similarity=0.090 Sum_probs=61.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCC--C---CC---CcceeCCHHHHHhcccccCC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME--Q---PL---EIPVMSDLTMVLGSISQSKA 106 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~--~---~~---gi~v~~~l~ell~~~~~~~~ 106 (163)
++||+|+| .|.||..++..+.+ .+.++.. +++... ..+.+ .|+. . .. .+.++++++++ ..
T Consensus 2 ~mkI~IiG-aGaiG~~~a~~L~~-~g~~V~~-~~r~~~-~~i~~-~g~~~~~~~g~~~~~~~~~~~~~~~~-------~~ 69 (312)
T 3hn2_A 2 SLRIAIVG-AGALGLYYGALLQR-SGEDVHF-LLRRDY-EAIAG-NGLKVFSINGDFTLPHVKGYRAPEEI-------GP 69 (312)
T ss_dssp --CEEEEC-CSTTHHHHHHHHHH-TSCCEEE-ECSTTH-HHHHH-TCEEEEETTCCEEESCCCEESCHHHH-------CC
T ss_pred CCEEEEEC-cCHHHHHHHHHHHH-CCCeEEE-EEcCcH-HHHHh-CCCEEEcCCCeEEEeeceeecCHHHc-------CC
Confidence 47999999 59999999999875 4667664 454321 11111 0110 0 00 23456777663 38
Q ss_pred ccEEEEccCchhHHHHHHH---HHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCeE
Q 031216 107 RAVVIDFTDASTVYDNVKQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMV 158 (163)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~---al~~G~~vVigttg~~~e~~~~L~~~A~~~~Vv 158 (163)
+|+||-++.+....+.+.. .+..+..+|+-.-|++.+ +.|.+...+..|+
T Consensus 70 ~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~--~~l~~~~~~~~v~ 122 (312)
T 3hn2_A 70 MDLVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNE--EALATLFGAERII 122 (312)
T ss_dssp CSEEEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHH--HHHHHHTCGGGEE
T ss_pred CCEEEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcH--HHHHHHCCCCcEE
Confidence 9999966666555444433 344566677766688643 3455544333443
No 329
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.40 E-value=0.0087 Score=52.50 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=29.2
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~ 70 (163)
++..+.||+|+| .|.||..++..+. ..+++++ ++|++
T Consensus 50 ~~~~i~kVaVIG-aG~MG~~IA~~la-~aG~~V~-l~D~~ 86 (460)
T 3k6j_A 50 EAYDVNSVAIIG-GGTMGKAMAICFG-LAGIETF-LVVRN 86 (460)
T ss_dssp CCCCCCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSC
T ss_pred CcccCCEEEEEC-CCHHHHHHHHHHH-HCCCeEE-EEECc
Confidence 344567999999 5999999999887 5689887 46754
No 330
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=96.40 E-value=0.01 Score=46.90 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=26.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
|.+|.|+|++|.+|+.+++.+.+ .+.+++...
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~-~G~~V~~~~ 34 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAP-MAEILRLAD 34 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGG-GEEEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-cCCEEEEEe
Confidence 46799999999999999999875 577777543
No 331
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.39 E-value=0.0068 Score=50.68 Aligned_cols=82 Identities=16% Similarity=0.249 Sum_probs=50.5
Q ss_pred ccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHH
Q 031216 16 SQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95 (163)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ 95 (163)
.++++..+|-.......-.-.+|+|+| .|+||+.+++.+. .-|+++.+ +|+... ....+ . ....+.+++
T Consensus 118 ~~~~~~~~W~~~~~~~~l~gktvGIiG-lG~IG~~vA~~l~-~~G~~V~~-~dr~~~--~~~~~-----~-~~~~~~~l~ 186 (324)
T 3evt_A 118 LNQRGARQWALPMTTSTLTGQQLLIYG-TGQIGQSLAAKAS-ALGMHVIG-VNTTGH--PADHF-----H-ETVAFTATA 186 (324)
T ss_dssp HHHTTTCCSSCSSCCCCSTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-EESSCC--CCTTC-----S-EEEEGGGCH
T ss_pred HHHHhcCCcccCCCCccccCCeEEEEC-cCHHHHHHHHHHH-hCCCEEEE-ECCCcc--hhHhH-----h-hccccCCHH
Confidence 344555555322112222347899999 7999999999987 45899886 564321 11111 0 112246889
Q ss_pred HHHhcccccCCccEEEEcc
Q 031216 96 MVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 96 ell~~~~~~~~~DVVIDfT 114 (163)
+++. ..|+|+...
T Consensus 187 ell~------~aDvV~l~l 199 (324)
T 3evt_A 187 DALA------TANFIVNAL 199 (324)
T ss_dssp HHHH------HCSEEEECC
T ss_pred HHHh------hCCEEEEcC
Confidence 9886 899998554
No 332
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=96.39 E-value=0.0095 Score=47.52 Aligned_cols=69 Identities=10% Similarity=0.160 Sum_probs=41.4
Q ss_pred eEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 37 KVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 37 rV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
||.|+|++|.+|+.+++.+.+. .+.+++++..+....... .+. ..++.-.+++++++.. .++|+||.+.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~~~----~~D~~d~~~~~~~~~~----~~~d~vih~a 70 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGI-KFI----TLDVSNRDEIDRAVEK----YSIDAIFHLA 70 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTC-CEE----ECCTTCHHHHHHHHHH----TTCCEEEECC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCc-eEE----EecCCCHHHHHHHHhh----cCCcEEEECC
Confidence 6899999999999999999876 467887654332110000 000 0111111234455542 3799999876
No 333
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=96.38 E-value=0.006 Score=45.79 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=41.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||.|+|++|.+|+.+++.+. .+.+++.+ ++... .. ..++.-.++++++++.. .++|+||...
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~--~g~~V~~~-~r~~~------~~----~~D~~~~~~~~~~~~~~---~~~d~vi~~a 66 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE--KKAEVITA-GRHSG------DV----TVDITNIDSIKKMYEQV---GKVDAIVSAT 66 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT--TTSEEEEE-ESSSS------SE----ECCTTCHHHHHHHHHHH---CCEEEEEECC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH--CCCeEEEE-ecCcc------ce----eeecCCHHHHHHHHHHh---CCCCEEEECC
Confidence 4689999999999999999987 58998765 43221 00 11121123455555421 2689999864
No 334
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.35 E-value=0.01 Score=49.55 Aligned_cols=103 Identities=14% Similarity=0.046 Sum_probs=61.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
..+|+|+| .|+||+.+++.+. .-|+++. ++|+.... ... .. + -+.++++++. ..|+|+...
T Consensus 145 g~~vgIiG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~~~-~~~-------~~-~-~~~~l~ell~------~aDvV~~~~ 205 (333)
T 1dxy_A 145 QQTVGVMG-TGHIGQVAIKLFK-GFGAKVI-AYDPYPMK-GDH-------PD-F-DYVSLEDLFK------QSDVIDLHV 205 (333)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSCCS-SCC-------TT-C-EECCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EECCCcch-hhH-------hc-c-ccCCHHHHHh------cCCEEEEcC
Confidence 47899999 7999999999987 4589976 46653211 110 11 2 2458999885 899999665
Q ss_pred Cchh-H----HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 115 DAST-V----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 115 ~p~~-~----~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
+... . .+.....++.|.-+|--.+|-- .+.+.|.++.++..+
T Consensus 206 P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~aL~~g~i 252 (333)
T 1dxy_A 206 PGIEQNTHIINEAAFNLMKPGAIVINTARPNL-IDTQAMLSNLKSGKL 252 (333)
T ss_dssp CCCGGGTTSBCHHHHHHSCTTEEEEECSCTTS-BCHHHHHHHHHTTSE
T ss_pred CCchhHHHHhCHHHHhhCCCCcEEEECCCCcc-cCHHHHHHHHHhCCc
Confidence 3221 1 1233445566655554333421 222456665555444
No 335
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=96.35 E-value=0.018 Score=47.39 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=27.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
|+|.|+|++|.+|+.+++.+.+..+.+++++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEec
Confidence 589999999999999999987345788887543
No 336
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=96.27 E-value=0.0027 Score=53.73 Aligned_cols=64 Identities=14% Similarity=0.013 Sum_probs=45.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-.+|||+| .|+||+.+++.+.. -|+++.+ +|+.. . ..... ..++...+++++++. ..|+|+...
T Consensus 160 g~tvGIIG-lG~IG~~vA~~l~~-~G~~V~~-~d~~~--~-~~~~~----~~g~~~~~~l~ell~------~aDiV~l~~ 223 (352)
T 3gg9_A 160 GQTLGIFG-YGKIGQLVAGYGRA-FGMNVLV-WGREN--S-KERAR----ADGFAVAESKDALFE------QSDVLSVHL 223 (352)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-ECSHH--H-HHHHH----HTTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-ECHHHHHHHHHHHh-CCCEEEE-ECCCC--C-HHHHH----hcCceEeCCHHHHHh------hCCEEEEec
Confidence 47899999 79999999999874 5899875 56431 1 11111 234555579999986 799988654
No 337
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=96.26 E-value=0.006 Score=51.02 Aligned_cols=65 Identities=12% Similarity=0.127 Sum_probs=44.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| .|+||+.+++.+. .-|+++.+ +|+.....+... ..++. +.++++++. ..|+|+..
T Consensus 144 ~g~tvGIIG-~G~IG~~vA~~l~-~~G~~V~~-~d~~~~~~~~~~------~~g~~-~~~l~ell~------~aDvV~l~ 207 (330)
T 4e5n_A 144 DNATVGFLG-MGAIGLAMADRLQ-GWGATLQY-HEAKALDTQTEQ------RLGLR-QVACSELFA------SSDFILLA 207 (330)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHTT-TSCCEEEE-ECSSCCCHHHHH------HHTEE-ECCHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHH-HCCCEEEE-ECCCCCcHhHHH------hcCce-eCCHHHHHh------hCCEEEEc
Confidence 347999999 7999999999976 56899774 565421111111 12332 458999986 79998855
Q ss_pred c
Q 031216 114 T 114 (163)
Q Consensus 114 T 114 (163)
.
T Consensus 208 ~ 208 (330)
T 4e5n_A 208 L 208 (330)
T ss_dssp C
T ss_pred C
Confidence 4
No 338
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.25 E-value=0.011 Score=51.44 Aligned_cols=113 Identities=19% Similarity=0.241 Sum_probs=72.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-----CCCCcchhhhccCCCCCC-cce-eCCHHHHHhcccccCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-----HSVGEDIGMVCDMEQPLE-IPV-MSDLTMVLGSISQSKA 106 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-----~~~g~~~~~l~g~~~~~g-i~v-~~~l~ell~~~~~~~~ 106 (163)
+..||+|.| .|++|+..++.+. ..+.+++++.|+ ...|.|..++.......+ +.- .-+.++++. .+
T Consensus 217 ~gk~vaVqG-~GnVG~~~a~~L~-~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~-----~~ 289 (419)
T 3aoe_E 217 RGARVVVQG-LGQVGAAVALHAE-RLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFG-----LE 289 (419)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGG-----SS
T ss_pred cCCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhc-----cC
Confidence 347899999 7999999999887 569999999996 245655544432210111 110 012345565 59
Q ss_pred ccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEc
Q 031216 107 RAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 107 ~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
+|+++-++.++.. .+++. +-+..+|+|-. .++++..+.| ++.+|++.
T Consensus 290 ~DVliP~A~~n~i~~~~A~---~l~ak~V~EgAN~p~t~~A~~~L----~~~Gi~~~ 339 (419)
T 3aoe_E 290 AEVLVLAAREGALDGDRAR---QVQAQAVVEVANFGLNPEAEAYL----LGKGALVV 339 (419)
T ss_dssp CSEEEECSCTTCBCHHHHT---TCCCSEEEECSTTCBCHHHHHHH----HHHTCEEE
T ss_pred ceEEEecccccccccchHh---hCCceEEEECCCCcCCHHHHHHH----HHCCCEEE
Confidence 9999988876655 44444 33889999876 3565544443 44567664
No 339
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=96.24 E-value=0.013 Score=49.11 Aligned_cols=86 Identities=13% Similarity=0.156 Sum_probs=52.5
Q ss_pred cccccccccceeeecc-CCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee
Q 031216 13 HHISQNVKAKRFISCS-TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM 91 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~-~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~ 91 (163)
+...++++..+|-.-. ....-...+|+|+| .|+||+.+++.+. .-++++. ++|+... ..... ..++. +
T Consensus 142 ~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIG-lG~IG~~vA~~l~-~~G~~V~-~~d~~~~-~~~~~------~~g~~-~ 210 (335)
T 2g76_A 142 PQATASMKDGKWERKKFMGTELNGKTLGILG-LGRIGREVATRMQ-SFGMKTI-GYDPIIS-PEVSA------SFGVQ-Q 210 (335)
T ss_dssp HHHHHHHHTTCCCTGGGCBCCCTTCEEEEEC-CSHHHHHHHHHHH-TTTCEEE-EECSSSC-HHHHH------HTTCE-E
T ss_pred HHHHHHHHcCCCCccCCCCcCCCcCEEEEEe-ECHHHHHHHHHHH-HCCCEEE-EECCCcc-hhhhh------hcCce-e
Confidence 3334455556552110 01122346899999 7999999999987 4689976 4665321 11111 22333 3
Q ss_pred CCHHHHHhcccccCCccEEEEccC
Q 031216 92 SDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 92 ~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
.++++++. ..|+|+...+
T Consensus 211 ~~l~ell~------~aDvV~l~~P 228 (335)
T 2g76_A 211 LPLEEIWP------LCDFITVHTP 228 (335)
T ss_dssp CCHHHHGG------GCSEEEECCC
T ss_pred CCHHHHHh------cCCEEEEecC
Confidence 58999885 8999996653
No 340
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.23 E-value=0.0045 Score=44.26 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=55.0
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-eeC---CHHHHHhcccccCCccE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMS---DLTMVLGSISQSKARAV 109 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~~---~l~ell~~~~~~~~~DV 109 (163)
+|.+|+|+| .|++|+.+++.+.+ .+.++++ +|++. .....+. ..++. ++. +.+.+... .-.++|+
T Consensus 5 ~~~~v~I~G-~G~iG~~la~~L~~-~g~~V~~-id~~~--~~~~~~~----~~~~~~~~gd~~~~~~l~~~--~~~~~d~ 73 (141)
T 3llv_A 5 GRYEYIVIG-SEAAGVGLVRELTA-AGKKVLA-VDKSK--EKIELLE----DEGFDAVIADPTDESFYRSL--DLEGVSA 73 (141)
T ss_dssp -CCSEEEEC-CSHHHHHHHHHHHH-TTCCEEE-EESCH--HHHHHHH----HTTCEEEECCTTCHHHHHHS--CCTTCSE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCeEEE-EECCH--HHHHHHH----HCCCcEEECCCCCHHHHHhC--CcccCCE
Confidence 356899999 59999999999874 5788874 56432 1122221 11222 222 22222210 0147899
Q ss_pred EEEccCchhH-HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHH
Q 031216 110 VIDFTDASTV-YDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151 (163)
Q Consensus 110 VIDfT~p~~~-~~~~~~al~~G~~vVigttg~~~e~~~~L~~~ 151 (163)
||..+..... ...+..+.+.|...|+.. ..+++..+.|.++
T Consensus 74 vi~~~~~~~~n~~~~~~a~~~~~~~iia~-~~~~~~~~~l~~~ 115 (141)
T 3llv_A 74 VLITGSDDEFNLKILKALRSVSDVYAIVR-VSSPKKKEEFEEA 115 (141)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCCCCEEEE-ESCGGGHHHHHHT
T ss_pred EEEecCCHHHHHHHHHHHHHhCCceEEEE-EcChhHHHHHHHc
Confidence 8855543332 334445555554333322 2344455555544
No 341
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=96.23 E-value=0.041 Score=42.47 Aligned_cols=84 Identities=19% Similarity=0.220 Sum_probs=54.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCC---HHHHHhcccccCCccEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD---LTMVLGSISQSKARAVV 110 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~---l~ell~~~~~~~~~DVV 110 (163)
.+.|+.|+|| |..|+.+++.+.+ .+.+++|.+|..... .. -.++|++.. ++++.. ...|-+
T Consensus 11 ~~k~v~IiGA-Gg~g~~v~~~l~~-~~~~~vgfiDd~~~~---~~------~~g~~Vlg~~~~~~~~~~-----~~~~~v 74 (220)
T 4ea9_A 11 AIGGVVIIGG-GGHAKVVIESLRA-CGETVAAIVDADPTR---RA------VLGVPVVGDDLALPMLRE-----QGLSRL 74 (220)
T ss_dssp CSSCEEEECC-SHHHHHHHHHHHH-TTCCEEEEECSCC------C------BTTBCEEESGGGHHHHHH-----TTCCEE
T ss_pred CCCCEEEEcC-CHHHHHHHHHHHh-CCCEEEEEEeCCccc---Cc------CCCeeEECCHHHHHHhhc-----ccccEE
Confidence 4568999996 9999999999886 789999999964321 11 236777744 344443 245544
Q ss_pred EEcc-CchhHHHHHHHHHHcCCcE
Q 031216 111 IDFT-DASTVYDNVKQATAFGMRS 133 (163)
Q Consensus 111 IDfT-~p~~~~~~~~~al~~G~~v 133 (163)
+-.- .+..-.+....+.+.|..+
T Consensus 75 ~iAIg~~~~R~~i~~~l~~~g~~~ 98 (220)
T 4ea9_A 75 FVAIGDNRLRQKLGRKARDHGFSL 98 (220)
T ss_dssp EECCCCHHHHHHHHHHHHHTTCEE
T ss_pred EEecCCHHHHHHHHHHHHhcCCCc
Confidence 4222 3333456777888887654
No 342
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=96.21 E-value=0.018 Score=45.94 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=27.8
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
++++|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~r 44 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTE-QNVEVFGTSR 44 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CcceEEEECCCChHHHHHHHHHHH-CCCEEEEEec
Confidence 467899999999999999999985 5789887543
No 343
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=96.21 E-value=0.018 Score=45.77 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=27.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+||.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHh-CCCEEEEEeC
Confidence 5899999999999999999985 5788886543
No 344
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.21 E-value=0.032 Score=48.46 Aligned_cols=37 Identities=27% Similarity=0.420 Sum_probs=28.6
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~ 70 (163)
++..+.||+|+| .|.||..++..+. ..+++++ ++|++
T Consensus 33 ~~~~~~kV~VIG-aG~MG~~iA~~la-~~G~~V~-l~D~~ 69 (463)
T 1zcj_A 33 SAQPVSSVGVLG-LGTMGRGIAISFA-RVGISVV-AVESD 69 (463)
T ss_dssp CCCCCCEEEEEC-CSHHHHHHHHHHH-TTTCEEE-EECSS
T ss_pred ccCCCCEEEEEC-cCHHHHHHHHHHH-hCCCeEE-EEECC
Confidence 344567899999 5999999999887 5688876 46743
No 345
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=96.21 E-value=0.014 Score=46.20 Aligned_cols=58 Identities=26% Similarity=0.237 Sum_probs=29.2
Q ss_pred eecccccccccccc-eeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 9 HCRMHHISQNVKAK-RFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 9 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
|-|.||-+.|-|-. .+.+.+-. .....++.|+|++|.+|+.+++.+.+ .|.+++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~m~-~~~~k~vlVTGas~gIG~aia~~l~~-~G~~V~~~~r 60 (260)
T 3un1_A 2 HHHHHHSSGVDLGTENLYFQSMM-RNQQKVVVITGASQGIGAGLVRAYRD-RNYRVVATSR 60 (260)
T ss_dssp ------------------CHHHH-HTTCCEEEESSCSSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CcccCcchhhhhhhhhhhhhhhh-CcCCCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEeC
Confidence 34556655554433 33333321 12235799999999999999999984 5888876543
No 346
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=96.20 E-value=0.028 Score=49.46 Aligned_cols=121 Identities=12% Similarity=0.029 Sum_probs=70.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHh---cC-CcEEEEEEecCCC------------------C-cchhhhcc-CC--CCCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTK---AR-GMEVAGAIDSHSV------------------G-EDIGMVCD-ME--QPLE 87 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~---~~-~~eLvgvid~~~~------------------g-~~~~~l~g-~~--~~~g 87 (163)
+|.||.|.|++|-+|+..+..+.+ +| .++++|+...+.. . ....++-. +. ...+
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v~v~d~~~~~~L~~~l~~~~~~~ 155 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKDYK 155 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEEEESCGGGTHHHHTGGGGSTTCC
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhhhcCCC
Confidence 577899999999999999999988 44 4999999873210 0 00111100 00 0112
Q ss_pred cceeCCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhc
Q 031216 88 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155 (163)
Q Consensus 88 i~v~~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~ 155 (163)
+.++...+. +.+++...++|+|+..-.=.....-...|+++|+.+-...-+---.-.+.+.+++++.
T Consensus 156 ~~v~~G~eg-l~e~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~IALANKESLV~aG~Lv~~~a~~~ 222 (488)
T 3au8_A 156 PIILCGDEG-MKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIH 222 (488)
T ss_dssp CEEEEHHHH-HHHHHHCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECCSHHHHHHHHHHHHHHHHS
T ss_pred ceEEeCHHH-HHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCcEEEecchhhhhchHHHHHHHHhc
Confidence 333322222 1122223579998855444445677788999999998855422223334556666665
No 347
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.19 E-value=0.018 Score=47.76 Aligned_cols=89 Identities=12% Similarity=0.133 Sum_probs=52.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-eC----C---HHHHHhcccccCC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MS----D---LTMVLGSISQSKA 106 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-~~----~---l~ell~~~~~~~~ 106 (163)
+++|.|+|++|.+|+.+++.+.+ .+.++.++..+.. ......+.. ..++.+ .. | +++++. .
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~-~~~~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~------~ 73 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAA-VGHHVRAQVHSLK-GLIAEELQA---IPNVTLFQGPLLNNVPLMDTLFE------G 73 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHH-TTCCEEEEESCSC-SHHHHHHHT---STTEEEEESCCTTCHHHHHHHHT------T
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCCC-hhhHHHHhh---cCCcEEEECCccCCHHHHHHHHh------c
Confidence 36899999999999999999985 6788887654322 111112211 012211 11 3 445553 7
Q ss_pred ccEEEEccCch------hHHHHHHHHHHcC-C-cEE
Q 031216 107 RAVVIDFTDAS------TVYDNVKQATAFG-M-RSV 134 (163)
Q Consensus 107 ~DVVIDfT~p~------~~~~~~~~al~~G-~-~vV 134 (163)
+|+||..+... .....+..+.+.| + ++|
T Consensus 74 ~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V 109 (352)
T 1xgk_A 74 AHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYI 109 (352)
T ss_dssp CSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred CCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEE
Confidence 99999765321 2244556777778 5 555
No 348
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.18 E-value=0.0099 Score=41.75 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=55.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-ee---CCHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VM---SDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~---~~l~ell~~~~~~~~~DVV 110 (163)
+.+|+|+|+ |.+|+.+++.+.+ .+.+++ ++|+.. .....+. ..+.. +. .+.+.+... .-.++|+|
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~-~g~~v~-~~d~~~--~~~~~~~----~~~~~~~~~d~~~~~~l~~~--~~~~~d~v 74 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHR-MGHEVL-AVDINE--EKVNAYA----SYATHAVIANATEENELLSL--GIRNFEYV 74 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHH-TTCCCE-EEESCH--HHHHTTT----TTCSEEEECCTTCHHHHHTT--TGGGCSEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HhCCEEEEeCCCCHHHHHhc--CCCCCCEE
Confidence 457999995 9999999999875 467766 456431 1111111 11221 22 233332210 01379999
Q ss_pred EEccCch-h-HHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHH
Q 031216 111 IDFTDAS-T-VYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150 (163)
Q Consensus 111 IDfT~p~-~-~~~~~~~al~~G~~vVigttg~~~e~~~~L~~ 150 (163)
|.++... . ....+..+.+.|.+-++... .+.+..+.|.+
T Consensus 75 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~~~~~~~~l~~ 115 (144)
T 2hmt_A 75 IVAIGANIQASTLTTLLLKELDIPNIWVKA-QNYYHHKVLEK 115 (144)
T ss_dssp EECCCSCHHHHHHHHHHHHHTTCSEEEEEC-CSHHHHHHHHH
T ss_pred EECCCCchHHHHHHHHHHHHcCCCeEEEEe-CCHHHHHHHHH
Confidence 9776532 2 23455666677766444322 23444444544
No 349
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.18 E-value=0.012 Score=52.01 Aligned_cols=67 Identities=16% Similarity=0.155 Sum_probs=46.1
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| +|+||+.+++.+.. -++++.+ +|+... ..... ..|+... ++++++. .+|+|+.+
T Consensus 141 ~g~~vgIIG-~G~IG~~vA~~l~~-~G~~V~~-~d~~~~-~~~a~------~~g~~~~-~l~e~~~------~aDvV~l~ 203 (529)
T 1ygy_A 141 FGKTVGVVG-LGRIGQLVAQRIAA-FGAYVVA-YDPYVS-PARAA------QLGIELL-SLDDLLA------RADFISVH 203 (529)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHT-TTCEEEE-ECTTSC-HHHHH------HHTCEEC-CHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHh-CCCEEEE-ECCCCC-hhHHH------hcCcEEc-CHHHHHh------cCCEEEEC
Confidence 347999999 79999999999874 5888774 575431 11111 2233333 8999885 89999977
Q ss_pred cCch
Q 031216 114 TDAS 117 (163)
Q Consensus 114 T~p~ 117 (163)
+++.
T Consensus 204 ~P~~ 207 (529)
T 1ygy_A 204 LPKT 207 (529)
T ss_dssp CCCS
T ss_pred CCCc
Confidence 6544
No 350
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=96.17 E-value=0.019 Score=46.53 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=27.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCC-----cEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARG-----MEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~-----~eLvgvid~ 69 (163)
+||.|+|++|.+|+.+++.+.+ .+ .+++++..+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~-~g~~~~~~~V~~~~r~ 39 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPL-ADTPGGPWKVYGVARR 39 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTS-TTCTTCSEEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHh-CCCCCCceEEEEEeCC
Confidence 5899999999999999999875 45 888876543
No 351
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=96.17 E-value=0.03 Score=45.18 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=27.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCC------cEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARG------MEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~------~eLvgvid 68 (163)
.+++|.|+|++|.+|+.+++.+.+... .+++++..
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r 53 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV 53 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence 357999999999999999999986431 67776543
No 352
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=96.16 E-value=0.012 Score=51.51 Aligned_cols=116 Identities=13% Similarity=0.183 Sum_probs=74.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-----CCCc----chhhhccCCCC--C---------CcceeCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGE----DIGMVCDMEQP--L---------EIPVMSD 93 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-----~~g~----~~~~l~g~~~~--~---------gi~v~~~ 93 (163)
...+|+|.| .|.||...++.+. ..+.+++++.|+. +.|. ++..+...... . +.... +
T Consensus 229 ~g~~v~VqG-~GnVG~~~a~~L~-~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i-~ 305 (449)
T 1bgv_A 229 VGKTVALAG-FGNVAWGAAKKLA-ELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFF-P 305 (449)
T ss_dssp TTCEEEECC-SSHHHHHHHHHHH-HHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEE-E
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEe-C
Confidence 347899999 6999999998886 4699999999952 4454 32222211100 0 11111 1
Q ss_pred HHHHHhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEc
Q 031216 94 LTMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVST 160 (163)
Q Consensus 94 l~ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~t 160 (163)
.++++. .++|+++-+..+... .+++......|+.+|++-. .++++.. +.+.++.||++.
T Consensus 306 ~~e~~~-----~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~---~~l~~~~Gi~~~ 367 (449)
T 1bgv_A 306 GEKPWG-----QKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEAL---RFLMQQPNMVVA 367 (449)
T ss_dssp TCCGGG-----SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHH---HHHHHCTTCEEE
T ss_pred chhhhc-----CCcceeeccccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHH---HHHHHcCCEEEE
Confidence 234554 599999977766655 6788888888999999876 4566553 233333277664
No 353
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.15 E-value=0.025 Score=48.64 Aligned_cols=101 Identities=18% Similarity=0.042 Sum_probs=59.8
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
.-.++||+| +|+||+.+++.+. .-|+++. ++|+... . . ..++....++++++. ..|+|+..
T Consensus 144 ~gktlGiIG-lG~IG~~vA~~l~-~~G~~V~-~~d~~~~-~---~------~~~~~~~~~l~ell~------~aDvV~l~ 204 (404)
T 1sc6_A 144 RGKKLGIIG-YGHIGTQLGILAE-SLGMYVY-FYDIENK-L---P------LGNATQVQHLSDLLN------MSDVVSLH 204 (404)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSCC-C---C------CTTCEECSCHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEe-ECHHHHHHHHHHH-HCCCEEE-EEcCCch-h---c------cCCceecCCHHHHHh------cCCEEEEc
Confidence 346899999 7999999999987 4689986 4675321 0 0 112334568999986 79999865
Q ss_pred cCch--h---HHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhh
Q 031216 114 TDAS--T---VYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154 (163)
Q Consensus 114 T~p~--~---~~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~ 154 (163)
.+.. . ..+-....++.|.-+|--.+|--. +.+.|.++.++
T Consensus 205 ~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~v-d~~aL~~aL~~ 249 (404)
T 1sc6_A 205 VPENPSTKNMMGAKEISLMKPGSLLINASRGTVV-DIPALADALAS 249 (404)
T ss_dssp CCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSB-CHHHHHHHHHT
T ss_pred cCCChHHHHHhhHHHHhhcCCCeEEEECCCChHH-hHHHHHHHHHc
Confidence 5322 1 113334455666555543333211 22344444444
No 354
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=96.15 E-value=0.0083 Score=50.10 Aligned_cols=104 Identities=13% Similarity=0.029 Sum_probs=60.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
..+|+|+| .|+||+.+++.+.. -++++. ++|+... .... .. +...+++++++. ..|+|+...
T Consensus 146 g~~vgIiG-~G~IG~~~A~~l~~-~G~~V~-~~d~~~~-~~~~-------~~-~~~~~~l~ell~------~aDvV~l~~ 207 (333)
T 1j4a_A 146 DQVVGVVG-TGHIGQVFMQIMEG-FGAKVI-TYDIFRN-PELE-------KK-GYYVDSLDDLYK------QADVISLHV 207 (333)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSCC-HHHH-------HT-TCBCSCHHHHHH------HCSEEEECS
T ss_pred CCEEEEEc-cCHHHHHHHHHHHH-CCCEEE-EECCCcc-hhHH-------hh-CeecCCHHHHHh------hCCEEEEcC
Confidence 46899999 79999999999874 588876 4665321 1111 11 222358999885 899999665
Q ss_pred Cch-hHH----HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 115 DAS-TVY----DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 115 ~p~-~~~----~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
... ... +.....++.|.-+|.-..|- ..+.+.|.++.++..+
T Consensus 208 p~~~~t~~li~~~~l~~mk~ga~lIn~arg~-~vd~~aL~~aL~~g~i 254 (333)
T 1j4a_A 208 PDVPANVHMINDESIAKMKQDVVIVNVSRGP-LVDTDAVIRGLDSGKI 254 (333)
T ss_dssp CCCGGGTTCBSHHHHHHSCTTEEEEECSCGG-GBCHHHHHHHHHHTSE
T ss_pred CCcHHHHHHHhHHHHhhCCCCcEEEECCCCc-ccCHHHHHHHHHhCCc
Confidence 321 111 22334455565444433332 1223455555555443
No 355
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.13 E-value=0.012 Score=49.23 Aligned_cols=85 Identities=19% Similarity=0.121 Sum_probs=51.8
Q ss_pred ccccccccccceeeeccCCC--CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc
Q 031216 12 MHHISQNVKAKRFISCSTNP--PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP 89 (163)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~--~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~ 89 (163)
++...++++..+|-...... .-.-.+|+|+| +|+||+.+++.+. .-|+++.+ +|+... +... ..++.
T Consensus 116 ~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG-~G~IG~~vA~~l~-~~G~~V~~-~d~~~~--~~~~------~~g~~ 184 (334)
T 2pi1_A 116 LKRIEDRVKKLNFSQDSEILARELNRLTLGVIG-TGRIGSRVAMYGL-AFGMKVLC-YDVVKR--EDLK------EKGCV 184 (334)
T ss_dssp HHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSSCC--HHHH------HTTCE
T ss_pred HHHHHHHHHcCCCccccCccceeccCceEEEEC-cCHHHHHHHHHHH-HCcCEEEE-ECCCcc--hhhH------hcCce
Confidence 33444555555553211111 12347899999 7999999999987 45899874 565321 1111 11232
Q ss_pred eeCCHHHHHhcccccCCccEEEEcc
Q 031216 90 VMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 90 v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
+.++++++. ..|+|+...
T Consensus 185 -~~~l~ell~------~aDvV~l~~ 202 (334)
T 2pi1_A 185 -YTSLDELLK------ESDVISLHV 202 (334)
T ss_dssp -ECCHHHHHH------HCSEEEECC
T ss_pred -ecCHHHHHh------hCCEEEEeC
Confidence 346999986 899988554
No 356
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=96.13 E-value=0.022 Score=45.61 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=27.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
++|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLE-KGYEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEEC
Confidence 5899999999999999999985 5889886543
No 357
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=96.11 E-value=0.026 Score=44.95 Aligned_cols=30 Identities=33% Similarity=0.506 Sum_probs=26.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
|||.|+|++|.+|+.+++.+.+ .+.+++++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~-~G~~V~~~ 30 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLA-RGLEVAVL 30 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHH-CCCEEEEE
Confidence 4899999999999999999874 68888765
No 358
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=96.10 E-value=0.023 Score=46.30 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=27.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
|++|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 33 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLE-KGYEVHGIKR 33 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHH-CCCEEEEEEC
Confidence 56899999999999999999985 4788886543
No 359
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=96.10 E-value=0.046 Score=43.51 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=27.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 45 k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r 76 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAK-SVSHVIC-ISR 76 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-TSSEEEE-EES
T ss_pred CEEEEECCCcHHHHHHHHHHHH-cCCEEEE-EcC
Confidence 5799999999999999999874 6888886 554
No 360
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.09 E-value=0.015 Score=52.86 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=60.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC----------------Ccc----hhh-hccCCCCCCcceeC-
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV----------------GED----IGM-VCDMEQPLEIPVMS- 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~----------------g~~----~~~-l~g~~~~~gi~v~~- 92 (163)
..||+|+|+ |..|..+++.+. ..|+.=..++|.+.+ |+. +.+ +..+.....+..+.
T Consensus 326 ~arVLIVGa-GGLGs~vA~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~ 403 (615)
T 4gsl_A 326 NTKVLLLGA-GTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 403 (615)
T ss_dssp TCEEEEECC-SHHHHHHHHHHH-HTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCeEEEECC-CHHHHHHHHHHH-HcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeec
Confidence 368999995 999999999987 568877778895321 111 000 00000011111111
Q ss_pred --------------------CHHHHHhcccccCCccEEEEccCc-hhHHHHHHHHHHcCCcEEEeCCCC
Q 031216 93 --------------------DLTMVLGSISQSKARAVVIDFTDA-STVYDNVKQATAFGMRSVVYVPHI 140 (163)
Q Consensus 93 --------------------~l~ell~~~~~~~~~DVVIDfT~p-~~~~~~~~~al~~G~~vVigttg~ 140 (163)
++++++. ++|+|||++.. +.-...-..|.++|+++|.+..|+
T Consensus 404 ~Ipm~gh~v~~e~~~~l~~~~l~~ll~------~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aalG~ 466 (615)
T 4gsl_A 404 SIPMIGHKLVNEEAQHKDFDRLRALIK------EHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGF 466 (615)
T ss_dssp CCCCTTCCCSCHHHHHHHHHHHHHHHH------HCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEEECS
T ss_pred cccccCccccchhhhcCCHHHHHHHhh------cCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEEccc
Confidence 2344553 79999999854 444566688999999998764343
No 361
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.07 E-value=0.024 Score=46.80 Aligned_cols=56 Identities=20% Similarity=0.235 Sum_probs=27.8
Q ss_pred cccccccccceeeeccCC---CCCC---CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC
Q 031216 13 HHISQNVKAKRFISCSTN---PPQS---NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~---~~~~---~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~ 70 (163)
||-|....-.|-|.-..- ..+. ..||.|+| .|..|..+++.+.. .|+-=..++|.+
T Consensus 8 ~~~~~~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvG-aGGlGs~va~~La~-aGVG~i~lvD~D 69 (292)
T 3h8v_A 8 HHHSSGLVPRGSMALKRMGIVSDYEKIRTFAVAIVG-VGGVGSVTAEMLTR-CGIGKLLLFDYD 69 (292)
T ss_dssp ------------------------CGGGGCEEEEEC-CSHHHHHHHHHHHH-HTCSEEEEECCC
T ss_pred ccccCCCCchHhhcccccChHHHHHHHhCCeEEEEC-cCHHHHHHHHHHHH-cCCCEEEEECCC
Confidence 444545555554443322 1233 46899999 59999999999884 577666788843
No 362
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.07 E-value=0.029 Score=48.57 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=59.3
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
.-.+|||+| +|+||+.+++.+.. -|+++.+ +|+... .. ..+...+.++++++. ..|+|+..
T Consensus 155 ~gktvGIIG-lG~IG~~vA~~l~~-~G~~V~~-yd~~~~-~~---------~~~~~~~~sl~ell~------~aDvV~lh 215 (416)
T 3k5p_A 155 RGKTLGIVG-YGNIGSQVGNLAES-LGMTVRY-YDTSDK-LQ---------YGNVKPAASLDELLK------TSDVVSLH 215 (416)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-ECTTCC-CC---------BTTBEECSSHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHH-CCCEEEE-ECCcch-hc---------ccCcEecCCHHHHHh------hCCEEEEe
Confidence 346899999 79999999999874 5899874 665321 00 112334579999996 89998855
Q ss_pred cCchh-H----HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcC
Q 031216 114 TDAST-V----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKAS 156 (163)
Q Consensus 114 T~p~~-~----~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~ 156 (163)
.+... . .+-....++.|.-+|--..|--.+ .+.|.++-++..
T Consensus 216 vPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd-~~aL~~aL~~g~ 262 (416)
T 3k5p_A 216 VPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVD-LEALAKVLQEGH 262 (416)
T ss_dssp CCC-----CCBCHHHHHHSCTTEEEEECSCTTSBC-HHHHHHHHHTTS
T ss_pred CCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhh-HHHHHHHHHcCC
Confidence 43211 1 122334455555554433343222 234554444433
No 363
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=96.02 E-value=0.012 Score=48.93 Aligned_cols=87 Identities=13% Similarity=0.034 Sum_probs=56.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCc--ceeCCHHHHHhcccccCCccEEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi--~v~~~l~ell~~~~~~~~~DVVID 112 (163)
..+++|+| +|.||+.+++.+....+++-+-+++++ ..+...+.+. ...++ .++ ++++++. ++|+||-
T Consensus 121 ~~~v~iIG-aG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~--~~~g~~~~~~-~~~eav~------~aDIVi~ 189 (313)
T 3hdj_A 121 SSVLGLFG-AGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIG--RRCGVPARMA-APADIAA------QADIVVT 189 (313)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHH--HHHTSCEEEC-CHHHHHH------HCSEEEE
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHH--HhcCCeEEEe-CHHHHHh------hCCEEEE
Confidence 36899999 699999999999875557777788876 3232222110 01133 345 9999985 8999996
Q ss_pred ccCchhHHHHH-HHHHHcCCcEE
Q 031216 113 FTDASTVYDNV-KQATAFGMRSV 134 (163)
Q Consensus 113 fT~p~~~~~~~-~~al~~G~~vV 134 (163)
+|.... +.+ ...++.|.+|+
T Consensus 190 aT~s~~--pvl~~~~l~~G~~V~ 210 (313)
T 3hdj_A 190 ATRSTT--PLFAGQALRAGAFVG 210 (313)
T ss_dssp CCCCSS--CSSCGGGCCTTCEEE
T ss_pred ccCCCC--cccCHHHcCCCcEEE
Confidence 664321 111 23467788877
No 364
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.98 E-value=0.0098 Score=47.92 Aligned_cols=66 Identities=18% Similarity=0.238 Sum_probs=43.0
Q ss_pred eEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 37 rV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
|++|+| .|+||+.++..+.+ .+++=+-+++++. .++.++.. ..+...++++++++. ++|+||..|+
T Consensus 110 ~vliiG-aGg~a~ai~~~L~~-~G~~~I~v~nR~~--~ka~~la~---~~~~~~~~~~~~~~~------~aDiVInatp 175 (253)
T 3u62_A 110 PVVVVG-AGGAARAVIYALLQ-MGVKDIWVVNRTI--ERAKALDF---PVKIFSLDQLDEVVK------KAKSLFNTTS 175 (253)
T ss_dssp SEEEEC-CSHHHHHHHHHHHH-TTCCCEEEEESCH--HHHHTCCS---SCEEEEGGGHHHHHH------TCSEEEECSS
T ss_pred eEEEEC-cHHHHHHHHHHHHH-cCCCEEEEEeCCH--HHHHHHHH---HcccCCHHHHHhhhc------CCCEEEECCC
Confidence 899999 59999999999885 5663334667642 22333321 223233567777664 7899997663
No 365
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=95.94 E-value=0.02 Score=47.66 Aligned_cols=125 Identities=16% Similarity=0.093 Sum_probs=67.3
Q ss_pred cccccccccceeeeccCCC--CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce
Q 031216 13 HHISQNVKAKRFISCSTNP--PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV 90 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~--~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v 90 (163)
+...++++..+|-...... .-...+|+|+| .|+||+.+++.+. .-|+++. ++|+... .... .. + -
T Consensus 122 ~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~~-~~~~-------~~-~-~ 188 (331)
T 1xdw_A 122 AYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVG-LGRIGRVAAQIFH-GMGATVI-GEDVFEI-KGIE-------DY-C-T 188 (331)
T ss_dssp HHHHHHHTTTCCCCCSTTCCCCGGGSEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSCC-CSCT-------TT-C-E
T ss_pred HHHHHHHHcCCCccccCcCccCCCCCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EECCCcc-HHHH-------hc-c-c
Confidence 3344555556553111111 22347899999 7999999999987 4689976 4665321 1110 11 2 2
Q ss_pred eCCHHHHHhcccccCCccEEEEccCch-hH----HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHhhhcCe
Q 031216 91 MSDLTMVLGSISQSKARAVVIDFTDAS-TV----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (163)
Q Consensus 91 ~~~l~ell~~~~~~~~~DVVIDfT~p~-~~----~~~~~~al~~G~~vVigttg~~~e~~~~L~~~A~~~~V 157 (163)
+.++++++. ..|+|+...+.. .. .+.....++.|.-+|--..|- ..+.+.|.++.++..+
T Consensus 189 ~~~l~ell~------~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~-~vd~~aL~~aL~~g~i 253 (331)
T 1xdw_A 189 QVSLDEVLE------KSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQ-LVDTEAVIEAVESGKL 253 (331)
T ss_dssp ECCHHHHHH------HCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGG-GBCHHHHHHHHHHTSE
T ss_pred cCCHHHHHh------hCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcc-cccHHHHHHHHHhCCc
Confidence 468999885 899999654321 11 122333455555444323332 1222445555555443
No 366
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=95.94 E-value=0.013 Score=49.49 Aligned_cols=91 Identities=22% Similarity=0.302 Sum_probs=46.0
Q ss_pred cccccccccccceeeeccCCCC-CCCeeEEEEcCCCHHHHHHHHHHHhcCCc------EEEEEEecCC-----CC--cch
Q 031216 11 RMHHISQNVKAKRFISCSTNPP-QSNIKVIINGAVKEIGRAAVIAVTKARGM------EVAGAIDSHS-----VG--EDI 76 (163)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~-~~~irV~VvGa~G~mG~~i~~~i~~~~~~------eLvgvid~~~-----~g--~~~ 76 (163)
|.||---|+++|-| .|+ .+++||.|+||+|++|+.++-.+...+=+ +|+ .+|... .| .|+
T Consensus 4 ~~~~~~~~~~~~~~-----~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~-L~Di~~~~~~~~Gva~DL 77 (345)
T 4h7p_A 4 HHHHHMGTLEAQTQ-----GPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELR-LLDIEPALKALAGVEAEL 77 (345)
T ss_dssp -----------------------CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEE-EECCGGGHHHHHHHHHHH
T ss_pred cccccccccccccc-----CCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEE-EECCCCccccchhhhhhh
Confidence 44555667887733 333 34699999999999999998877654422 454 778432 12 122
Q ss_pred hhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 77 GMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 77 ~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
.+. ..+....+.+.++.++.+. +.|+||...
T Consensus 78 ~~~-~~~~~~~~~~~~~~~~a~~------~advVvi~a 108 (345)
T 4h7p_A 78 EDC-AFPLLDKVVVTADPRVAFD------GVAIAIMCG 108 (345)
T ss_dssp HHT-TCTTEEEEEEESCHHHHTT------TCSEEEECC
T ss_pred hhc-CccCCCcEEEcCChHHHhC------CCCEEEECC
Confidence 221 1111123445688888874 999988643
No 367
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=95.93 E-value=0.016 Score=48.73 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=31.6
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
++..+.+|.|+|++|.+|+.+++.+. ..+.++.++..+
T Consensus 65 ~~~~~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~R~ 102 (427)
T 4f6c_A 65 SHRPLGNTLLTGATGFLGAYLIEALQ-GYSHRIYCFIRA 102 (427)
T ss_dssp CCCCCEEEEEECTTSHHHHHHHHHHT-TTEEEEEEEEEC
T ss_pred CCCCCCEEEEecCCcHHHHHHHHHHH-cCCCEEEEEECC
Confidence 34456899999999999999999994 678899887664
No 368
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.92 E-value=0.057 Score=47.14 Aligned_cols=106 Identities=11% Similarity=0.077 Sum_probs=61.2
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC-------CCcc------hhhhcc--CCCCCCcceeCCHHHH
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-------VGED------IGMVCD--MEQPLEIPVMSDLTMV 97 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~-------~g~~------~~~l~g--~~~~~gi~v~~~l~el 97 (163)
+.|-+|+|+| +|++|--++..+. ..+.+++| +|.+. .|+. +.+++. . .......++|++++
T Consensus 19 ~~m~~IaViG-lGYVGLp~A~~~A-~~G~~V~g-~Did~~kV~~ln~G~~pi~Epgl~ell~~~~-~~g~l~~tt~~~~a 94 (444)
T 3vtf_A 19 SHMASLSVLG-LGYVGVVHAVGFA-LLGHRVVG-YDVNPSIVERLRAGRPHIYEPGLEEALGRAL-SSGRLSFAESAEEA 94 (444)
T ss_dssp CCCCEEEEEC-CSHHHHHHHHHHH-HHTCEEEE-ECSCHHHHHHHHTTCCSSCCTTHHHHHHHHH-HTTCEEECSSHHHH
T ss_pred CCCCEEEEEc-cCHHHHHHHHHHH-hCCCcEEE-EECCHHHHHHHHCCCCCCCCCCHHHHHHHHH-HcCCeeEEcCHHHH
Confidence 3578999999 7999998888776 45889886 57321 1110 111110 0 02234556788887
Q ss_pred HhcccccCCccEEEEcc-Cch------------hHHHHHHHHHH---cCCcEEEeCC---CCCHHHHHHH
Q 031216 98 LGSISQSKARAVVIDFT-DAS------------TVYDNVKQATA---FGMRSVVYVP---HIQLETVSAL 148 (163)
Q Consensus 98 l~~~~~~~~~DVVIDfT-~p~------------~~~~~~~~al~---~G~~vVigtt---g~~~e~~~~L 148 (163)
+. ..|++|.+- +|. .+.+.+...++ .|.-||+..| |.+++....+
T Consensus 95 i~------~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~ 158 (444)
T 3vtf_A 95 VA------ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARA 158 (444)
T ss_dssp HH------TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHH
T ss_pred Hh------cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHH
Confidence 75 789887542 231 22233333344 3556777666 7776644433
No 369
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=95.90 E-value=0.027 Score=44.85 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=27.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
.||.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~r 33 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLE-NGYSVNTTIR 33 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEECC
T ss_pred CEEEEECChhHHHHHHHHHHHH-CCCEEEEEEe
Confidence 4799999999999999999874 6889887654
No 370
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=95.90 E-value=0.016 Score=46.82 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=28.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
+.+|.|+|++|.+|+.+++.+.+ .+.++++...+
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~-~G~~V~~~~r~ 38 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLE-RGYTVRATVRD 38 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESC
T ss_pred CCEEEEECCchHHHHHHHHHHHH-CCCEEEEEECC
Confidence 46899999999999999999875 68898876653
No 371
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.90 E-value=0.028 Score=47.26 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=55.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCC------------cchhh---------hccCCCCCCccee-C
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG------------EDIGM---------VCDMEQPLEIPVM-S 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g------------~~~~~---------l~g~~~~~gi~v~-~ 92 (163)
..||.|+| .|..|..+++.+. ..|+.=+.++|.+... .+++. +..+.....+..+ .
T Consensus 118 ~~~VlvvG-~GglGs~va~~La-~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 118 NAKVVILG-CGGIGNHVSVILA-TSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHH-hCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 46899999 5999999999987 4577666788853210 00000 0000000111111 1
Q ss_pred ------CHHHHHhcccccCCccEEEEccC-ch-hHHHHHHHHHHcCCcEEEe
Q 031216 93 ------DLTMVLGSISQSKARAVVIDFTD-AS-TVYDNVKQATAFGMRSVVY 136 (163)
Q Consensus 93 ------~l~ell~~~~~~~~~DVVIDfT~-p~-~~~~~~~~al~~G~~vVig 136 (163)
++++ + .++|+|||++. +. .-...-..|.+.|+|+|.+
T Consensus 196 ~i~~~~~~~~-~------~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 196 NINDYTDLHK-V------PEADIWVVSADHPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp CCCSGGGGGG-S------CCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred ccCchhhhhH-h------ccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEE
Confidence 1333 3 48999999884 44 3344557889999999854
No 372
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=95.89 E-value=0.024 Score=45.27 Aligned_cols=54 Identities=28% Similarity=0.322 Sum_probs=26.5
Q ss_pred ccccccc--ccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 13 HHISQNV--KAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 13 ~~~~~~~--~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
||-|..| --++|.+.+-....+ ..+.|+|++|.+|+.+++.+.+ .|.+++. +++
T Consensus 5 ~~~~~~~~~~~~~~~~~~m~~~~~-k~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r 60 (272)
T 4dyv_A 5 HHHSSGVDLGTENLYFQSMSKTGK-KIAIVTGAGSGVGRAVAVALAG-AGYGVAL-AGR 60 (272)
T ss_dssp -----------------------C-CEEEETTTTSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred ccccccccCCcceeehhhhcCCCC-CEEEEeCCCcHHHHHHHHHHHH-CCCEEEE-EEC
Confidence 3444444 347777776543333 5688999999999999999984 6888765 454
No 373
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=95.89 E-value=0.11 Score=41.53 Aligned_cols=48 Identities=19% Similarity=0.226 Sum_probs=29.5
Q ss_pred cccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 19 VKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 19 ~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
.+.+++++.+-...-....+.|+|++|.+|+.+++.+. ..+.+++.+.
T Consensus 13 ~~~~n~~~~~mm~~~~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~ 60 (280)
T 4da9_A 13 LGTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALA-ASGFDIAITG 60 (280)
T ss_dssp ----------CCSCCCCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred ccccchhhhhhhhccCCCEEEEecCCCHHHHHHHHHHH-HCCCeEEEEe
Confidence 34566666554444444679999999999999999998 4688887544
No 374
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.88 E-value=0.019 Score=47.55 Aligned_cols=60 Identities=22% Similarity=0.188 Sum_probs=42.9
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
...+|+|+| .|+||+.+++.+.. -++++. ++|+..... . + .+.++++++. ..|+|+..
T Consensus 143 ~g~~vgIIG-~G~IG~~~A~~l~~-~G~~V~-~~d~~~~~~----------~--~-~~~~l~ell~------~aDvV~l~ 200 (311)
T 2cuk_A 143 QGLTLGLVG-MGRIGQAVAKRALA-FGMRVV-YHARTPKPL----------P--Y-PFLSLEELLK------EADVVSLH 200 (311)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSCCSS----------S--S-CBCCHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEE-ECHHHHHHHHHHHH-CCCEEE-EECCCCccc----------c--c-ccCCHHHHHh------hCCEEEEe
Confidence 457899999 79999999999874 578876 466532110 1 1 1468888885 78999866
Q ss_pred cC
Q 031216 114 TD 115 (163)
Q Consensus 114 T~ 115 (163)
.+
T Consensus 201 ~p 202 (311)
T 2cuk_A 201 TP 202 (311)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 375
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=95.83 E-value=0.05 Score=43.71 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
+||.|+|++|.+|+.+++.+.+ .+.+++++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQ-NGHDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEEe
Confidence 4899999999999999999885 588888653
No 376
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.82 E-value=0.045 Score=46.96 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=59.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-eCCH--HHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDL--TMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v-~~~l--~ell~~~~~~~~~DVVI 111 (163)
..+|.|+| .|++|+.+++.+.+ .+.+++. +|.+. ..+..+. ..++++ +.|. .+.+... .-.++|+||
T Consensus 4 ~~~viIiG-~Gr~G~~va~~L~~-~g~~vvv-Id~d~--~~v~~~~----~~g~~vi~GDat~~~~L~~a-gi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAG-FGRFGQITGRLLLS-SGVKMVV-LDHDP--DHIETLR----KFGMKVFYGDATRMDLLESA-GAAKAEVLI 73 (413)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHH-TTCCEEE-EECCH--HHHHHHH----HTTCCCEESCTTCHHHHHHT-TTTTCSEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHH-CCCCEEE-EECCH--HHHHHHH----hCCCeEEEcCCCCHHHHHhc-CCCccCEEE
Confidence 36899999 69999999999874 6788874 56432 1122221 223433 3332 1222210 014789888
Q ss_pred EccCchh-HHHHHHHHHHcCCc--EEEeCCCCCHHHHHHHHHHh
Q 031216 112 DFTDAST-VYDNVKQATAFGMR--SVVYVPHIQLETVSALSAFC 152 (163)
Q Consensus 112 DfT~p~~-~~~~~~~al~~G~~--vVigttg~~~e~~~~L~~~A 152 (163)
-++.... ....+..+.+.+.+ +|. -..+.+....|.++.
T Consensus 74 v~~~~~~~n~~i~~~ar~~~p~~~Iia--ra~~~~~~~~L~~~G 115 (413)
T 3l9w_A 74 NAIDDPQTNLQLTEMVKEHFPHLQIIA--RARDVDHYIRLRQAG 115 (413)
T ss_dssp ECCSSHHHHHHHHHHHHHHCTTCEEEE--EESSHHHHHHHHHTT
T ss_pred ECCCChHHHHHHHHHHHHhCCCCeEEE--EECCHHHHHHHHHCC
Confidence 5553333 34555666666644 443 235566667776653
No 377
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.81 E-value=0.02 Score=43.98 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=54.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcc-eeC---CHHHHHhcccccCCccEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMS---DLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~-v~~---~l~ell~~~~~~~~~DVVI 111 (163)
|||.|+| .|++|+.+++.+.+ .+.+++ ++|++. ..+..+.. ..++. ++. +.+.+... .-.++|+||
T Consensus 1 M~iiIiG-~G~~G~~la~~L~~-~g~~v~-vid~~~--~~~~~l~~---~~~~~~i~gd~~~~~~l~~a--~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIG-GETTAYYLARSMLS-RKYGVV-IINKDR--ELCEEFAK---KLKATIIHGDGSHKEILRDA--EVSKNDVVV 70 (218)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHH-TTCCEE-EEESCH--HHHHHHHH---HSSSEEEESCTTSHHHHHHH--TCCTTCEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-CCCeEE-EEECCH--HHHHHHHH---HcCCeEEEcCCCCHHHHHhc--CcccCCEEE
Confidence 5899999 59999999999875 578887 456432 11222211 11222 222 22222110 014899998
Q ss_pred EccCchhHHHH-HHHHHH-cCCcEEEeCCCCCHHHHHHHHHH
Q 031216 112 DFTDASTVYDN-VKQATA-FGMRSVVYVPHIQLETVSALSAF 151 (163)
Q Consensus 112 DfT~p~~~~~~-~~~al~-~G~~vVigttg~~~e~~~~L~~~ 151 (163)
-++..+..... +..+.+ .+..-++... .+++..+.|.++
T Consensus 71 ~~~~~d~~n~~~~~~a~~~~~~~~iia~~-~~~~~~~~l~~~ 111 (218)
T 3l4b_C 71 ILTPRDEVNLFIAQLVMKDFGVKRVVSLV-NDPGNMEIFKKM 111 (218)
T ss_dssp ECCSCHHHHHHHHHHHHHTSCCCEEEECC-CSGGGHHHHHHH
T ss_pred EecCCcHHHHHHHHHHHHHcCCCeEEEEE-eCcchHHHHHHC
Confidence 55544443333 333443 4655455332 334455555444
No 378
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.81 E-value=0.017 Score=50.75 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=26.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~ 70 (163)
+.||+|+| .|.||..++..+. ..+++++ ++|++
T Consensus 5 ~~kVgVIG-aG~MG~~IA~~la-~aG~~V~-l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIG-SGTMGAGIAEVAA-SHGHQVL-LYDIS 37 (483)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHH-HTTCCEE-EECSC
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCeEE-EEECC
Confidence 45899999 5999999999987 4688876 46754
No 379
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=95.81 E-value=0.028 Score=45.67 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=28.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
+++|.|+|++|.+|+.+++.+.+ .+.+++++..+
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~ 42 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQT-MGATVKGYSLT 42 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHh-CCCeEEEEeCC
Confidence 36899999999999999999985 57898876543
No 380
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=95.79 E-value=0.033 Score=41.65 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=27.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid 68 (163)
++||.|+|++|.+|+.+++.+.+.... ++.++..
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r 39 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR 39 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 468999999999999999999865432 7776543
No 381
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=95.76 E-value=0.022 Score=48.49 Aligned_cols=63 Identities=14% Similarity=0.142 Sum_probs=44.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-.+|||+| .|+||+.+++.+. .-|+++.+ +|+... . .... ..++. +.++++++. ..|+|+...
T Consensus 176 gktvGIIG-lG~IG~~vA~~l~-~fG~~V~~-~d~~~~--~-~~~~----~~g~~-~~~l~ell~------~aDvV~l~~ 238 (365)
T 4hy3_A 176 GSEIGIVG-FGDLGKALRRVLS-GFRARIRV-FDPWLP--R-SMLE----ENGVE-PASLEDVLT------KSDFIFVVA 238 (365)
T ss_dssp SSEEEEEC-CSHHHHHHHHHHT-TSCCEEEE-ECSSSC--H-HHHH----HTTCE-ECCHHHHHH------SCSEEEECS
T ss_pred CCEEEEec-CCcccHHHHHhhh-hCCCEEEE-ECCCCC--H-HHHh----hcCee-eCCHHHHHh------cCCEEEEcC
Confidence 46899999 7999999999886 55899874 665321 1 1111 12333 569999986 899999654
No 382
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=95.75 E-value=0.021 Score=44.41 Aligned_cols=36 Identities=25% Similarity=0.390 Sum_probs=28.8
Q ss_pred CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 33 ~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
+++.++.|+|++|.+|+.+++.+.+..+..++. .++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~-~~~ 37 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVIN-IDI 37 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEE-EES
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEE-ecc
Confidence 346789999999999999999998767777764 453
No 383
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=95.73 E-value=0.064 Score=45.70 Aligned_cols=115 Identities=12% Similarity=0.082 Sum_probs=57.0
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCC-Ccc-eeCCHHHHHhcccccCCcc
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIP-VMSDLTMVLGSISQSKARA 108 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~-gi~-v~~~l~ell~~~~~~~~~D 108 (163)
|..+++||+|+| .|.-...+++.+.+..+++.+.+.+.. .+. ..+. .. .+. -+.|.+++++ +++..++|
T Consensus 20 ~~~m~~~IlIlG-~g~r~~al~~~~a~~~g~~~v~~~~~~-~~~--~~~~----~~~~~~~~~~d~~~l~~-~~~~~~~d 90 (452)
T 2qk4_A 20 FQSMAARVLIIG-SGGREHTLAWKLAQSHHVKQVLVAPGN-AGT--ACSE----KISNTAISISDHTALAQ-FCKEKKIE 90 (452)
T ss_dssp --CCSEEEEEEE-CSHHHHHHHHHHTTCTTEEEEEEEECC-GGG--SBSS----SEEECCCCSSCHHHHHH-HHHHHTCC
T ss_pred ccccCcEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEECCC-hhh--hhhc----cccccccCCCCHHHHHH-HHHHcCCC
Confidence 333458999999 473233355666677788866554422 111 1110 10 111 1456666553 22235799
Q ss_pred EEEEccCchhH--HHHHHHHHHcCCcEEEeCCC--CC-HHHHHHHHHHhhhcCe
Q 031216 109 VVIDFTDASTV--YDNVKQATAFGMRSVVYVPH--IQ-LETVSALSAFCDKASM 157 (163)
Q Consensus 109 VVIDfT~p~~~--~~~~~~al~~G~~vVigttg--~~-~e~~~~L~~~A~~~~V 157 (163)
+|+-. ++.. ...+..+.+.|++++ |.+. .. ..+....++++++.||
T Consensus 91 ~V~~~--~E~~~~~~~~~~l~~~gi~~~-g~~~~~~~~~~dK~~~k~~l~~~gi 141 (452)
T 2qk4_A 91 FVVVG--PEAPLAAGIVGNLRSAGVQCF-GPTAEAAQLESSKRFAKEFMDRHGI 141 (452)
T ss_dssp EEEEC--SSHHHHTTHHHHHHHTTCCEE-SCCTTTTHHHHBHHHHHHHHHHTTC
T ss_pred EEEEC--CcHHHHHHHHHHHHhcCCcEe-CcCHHHHHHhcCHHHHHHHHHHCCC
Confidence 88732 3332 245555567899864 4432 11 1223344455555443
No 384
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.67 E-value=0.033 Score=46.36 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=46.0
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhcc-CCCCCCcceeCCHHHHHhcccccCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKA 106 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~~---g--~~~~~l~g-~~~~~gi~v~~~l~ell~~~~~~~~ 106 (163)
+++||+|+|+ |.||..++..+... ++ + +.++|.... + .+..+... ......+..++|+++++. +
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~-g~~~-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~------~ 78 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALR-ELAD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALT------G 78 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHH-TCCE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHT------T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCCe-EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhC------C
Confidence 3579999996 99999999988754 54 7 667885431 1 11111110 001234555689987774 8
Q ss_pred ccEEEEcc
Q 031216 107 RAVVIDFT 114 (163)
Q Consensus 107 ~DVVIDfT 114 (163)
+|+||...
T Consensus 79 aDiVi~a~ 86 (331)
T 1pzg_A 79 ADCVIVTA 86 (331)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcc
Confidence 99999654
No 385
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=95.67 E-value=0.11 Score=45.46 Aligned_cols=115 Identities=14% Similarity=0.170 Sum_probs=76.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhccCC--------------CCCCcceeCCHH
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDME--------------QPLEIPVMSDLT 95 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-----~~g~~~~~l~g~~--------------~~~gi~v~~~l~ 95 (163)
-.||+|-| +|++|...++.+. ..|.+++++.|+. ..|.|..++.-+. ...+.. +-+.+
T Consensus 235 Gk~vaVQG-~GnVG~~aa~~L~-e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~-~~~~~ 311 (450)
T 4fcc_A 235 GMRVSVSG-SGNVAQYAIEKAM-EFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLV-YLEGQ 311 (450)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCE-EEETC
T ss_pred CCEEEEeC-CChHHHHHHHHHH-hcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcE-EecCc
Confidence 47899999 7999999999887 5799999998853 4455443322110 001111 12334
Q ss_pred HHHhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEcC
Q 031216 96 MVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 96 ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
+++. .++|+++=+...... .+++......|+.+|++-. ..+++..+.| ++.+|+|.+
T Consensus 312 ~i~~-----~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~iL----~~rGIl~~P 371 (450)
T 4fcc_A 312 QPWS-----VPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELF----QQAGVLFAP 371 (450)
T ss_dssp CGGG-----SCCSEEEECSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHH----HHTTCEEEC
T ss_pred cccc-----CCccEEeeccccccccHHHHHHHHhcCceEEecCCCCCCCHHHHHHH----HHCCCEEEC
Confidence 5555 589999976655444 6888888889999999844 4566654433 457788754
No 386
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.65 E-value=0.0076 Score=48.81 Aligned_cols=99 Identities=9% Similarity=-0.019 Sum_probs=54.6
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
++||+|+| .|.||..++..+.+. +.++. ++++...+.+.....| .....+..+..+.+. .++|+||-++
T Consensus 2 ~mkI~iiG-aGa~G~~~a~~L~~~-g~~V~-~~~r~~~~~~~~~~~g---~~~~~~~~~~~~~~~-----~~~D~vilav 70 (294)
T 3g17_A 2 SLSVAIIG-PGAVGTTIAYELQQS-LPHTT-LIGRHAKTITYYTVPH---APAQDIVVKGYEDVT-----NTFDVIIIAV 70 (294)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHH-CTTCE-EEESSCEEEEEESSTT---SCCEEEEEEEGGGCC-----SCEEEEEECS
T ss_pred CcEEEEEC-CCHHHHHHHHHHHHC-CCeEE-EEEeccCcEEEEecCC---eeccceecCchHhcC-----CCCCEEEEeC
Confidence 47999999 599999999988753 45555 3454322211111001 011223333333332 3899999677
Q ss_pred CchhHHHHHHH---HHHcCCcEEEeCCCCCHHH
Q 031216 115 DASTVYDNVKQ---ATAFGMRSVVYVPHIQLET 144 (163)
Q Consensus 115 ~p~~~~~~~~~---al~~G~~vVigttg~~~e~ 144 (163)
.|....+.+.. .+..+..+|+-.-|+..++
T Consensus 71 k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 71 KTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp CGGGHHHHGGGHHHHEEEEEEEEECCSSCCCGG
T ss_pred CccCHHHHHHHHHHhhCCCCEEEEeccCcccHh
Confidence 66655554433 3334556666556876554
No 387
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.65 E-value=0.015 Score=47.91 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=53.3
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhc--cCC-------CCCCcceeCCHHHHHhcccccC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DME-------QPLEIPVMSDLTMVLGSISQSK 105 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~--g~~-------~~~gi~v~~~l~ell~~~~~~~ 105 (163)
++||+|+| .|.||..++..+.+ .+.++.. +++.. ....+. |.. ....+..+++++++ .
T Consensus 3 ~mkI~IiG-aG~~G~~~a~~L~~-~g~~V~~-~~r~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~ 69 (335)
T 3ghy_A 3 LTRICIVG-AGAVGGYLGARLAL-AGEAINV-LARGA---TLQALQTAGLRLTEDGATHTLPVRATHDAAAL-------G 69 (335)
T ss_dssp CCCEEEES-CCHHHHHHHHHHHH-TTCCEEE-ECCHH---HHHHHHHTCEEEEETTEEEEECCEEESCHHHH-------C
T ss_pred CCEEEEEC-cCHHHHHHHHHHHH-CCCEEEE-EEChH---HHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-------C
Confidence 47999999 59999999999875 4666654 44321 111110 100 01123446788764 3
Q ss_pred CccEEEEccCchhHHHHHHHH---HHcCCcEEEeCCCC
Q 031216 106 ARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHI 140 (163)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigttg~ 140 (163)
++|+||.++.+....+.+... +..+..+|.-..|+
T Consensus 70 ~~D~Vilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 EQDVVIVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CCSEEEECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred CCCEEEEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 899999555554444443322 23456666655574
No 388
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=95.64 E-value=0.074 Score=44.58 Aligned_cols=95 Identities=13% Similarity=0.108 Sum_probs=58.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC----------------CCcc-h---h-hhccCCCCCCccee-C
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----------------VGED-I---G-MVCDMEQPLEIPVM-S 92 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~----------------~g~~-~---~-~l~g~~~~~gi~v~-~ 92 (163)
..||.|+| .|..|..+++.+. ..|+.=+-++|.+. .|+. + . .+..+.....+..+ .
T Consensus 36 ~~~VlivG-~GGlG~~ia~~La-~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~ 113 (346)
T 1y8q_A 36 ASRVLLVG-LKGLGAEIAKNLI-LAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTE 113 (346)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECS
T ss_pred CCeEEEEC-CCHHHHHHHHHHH-HcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEec
Confidence 36899999 5999999999988 56886666888421 1111 0 0 00001001112222 2
Q ss_pred C----HHHHHhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeC
Q 031216 93 D----LTMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYV 137 (163)
Q Consensus 93 ~----l~ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigt 137 (163)
+ .++.+. .+|+|||++.+... ...-..|.+.++++|.+-
T Consensus 114 ~~~~~~~~~~~------~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~ 157 (346)
T 1y8q_A 114 DIEKKPESFFT------QFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGD 157 (346)
T ss_dssp CGGGCCHHHHT------TCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCcchHHHhc------CCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 2 345553 89999998855444 556678889999999653
No 389
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.63 E-value=0.047 Score=44.85 Aligned_cols=98 Identities=19% Similarity=0.162 Sum_probs=52.0
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce--eCCHHHHHhcccccCCccEEEEc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v--~~~l~ell~~~~~~~~~DVVIDf 113 (163)
-+|.|+|++|.+|+.+++.+. ..+.+++++..+... .+...-+|. ..-+.. ..++.+.+.+.... .+|+|||+
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~-~~Ga~V~~~~~~~~~-~~~~~~~g~--~~~~d~~~~~~~~~~~~~~~~~-~~D~vi~~ 245 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAK-AMGYRVLGIDGGEGK-EELFRSIGG--EVFIDFTKEKDIVGAVLKATDG-GAHGVINV 245 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSTTH-HHHHHHTTC--CEEEETTTCSCHHHHHHHHHTS-CEEEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCcEEEEcCCHHH-HHHHHHcCC--ceEEecCccHhHHHHHHHHhCC-CCCEEEEC
Confidence 579999988999999998876 457887765433211 111111121 000000 12444444321112 69999998
Q ss_pred cCchhHHHHHHHHHH-cCCcEEEeCC
Q 031216 114 TDASTVYDNVKQATA-FGMRSVVYVP 138 (163)
Q Consensus 114 T~p~~~~~~~~~al~-~G~~vVigtt 138 (163)
+-.....+.+..+++ .|.-+.+|.+
T Consensus 246 ~g~~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 246 SVSEAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp SSCHHHHHHHTTSEEEEEEEEECCCC
T ss_pred CCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 764444444444444 3444445544
No 390
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.63 E-value=0.037 Score=50.06 Aligned_cols=98 Identities=12% Similarity=0.138 Sum_probs=59.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC----------------CCcc----hhhhc-cCCCCCCccee--
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----------------VGED----IGMVC-DMEQPLEIPVM-- 91 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~----------------~g~~----~~~l~-g~~~~~gi~v~-- 91 (163)
..||.|+| .|..|..+++.+. ..|+.=..++|.+. .|+. +.+.+ .+.....+..+
T Consensus 327 ~~kVLIVG-aGGLGs~va~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~ 404 (598)
T 3vh1_A 327 NTKVLLLG-AGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 404 (598)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-TTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCeEEEEC-CCHHHHHHHHHHH-HcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEec
Confidence 46899999 5999999999987 57887777888431 1111 00000 00001111111
Q ss_pred -------------------CCHHHHHhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCCCC
Q 031216 92 -------------------SDLTMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVPHI 140 (163)
Q Consensus 92 -------------------~~l~ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigttg~ 140 (163)
+++++++. +.|+|||++..-.. ...-..|.++++++|.+.-|+
T Consensus 405 ~I~~pgh~i~~~~~~~l~~~~l~~li~------~~DvVvdatDn~~tR~lin~~c~~~~~plI~aa~G~ 467 (598)
T 3vh1_A 405 SIPMIGHKLVNEEAQHKDFDRLRALIK------EHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGF 467 (598)
T ss_dssp CCCCSSCCCCSHHHHHHHHHHHHHHHH------HCSEEEECCSBGGGTHHHHHHHHHTTCEEEEEEECS
T ss_pred cccccCcccccccccccCHHHHHHHHh------cCCEEEECCCCHHHHHHHHHHHHhcCCCEEEEEECC
Confidence 12234553 78999999854444 556678889999988764453
No 391
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.63 E-value=0.027 Score=47.83 Aligned_cols=107 Identities=13% Similarity=0.159 Sum_probs=66.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDf 113 (163)
.-.+|+|.| .|++|+.+++.+. .-+++++ +.|+... + .++.. ..+.. +-+.++++. .+.|+++-+
T Consensus 174 ~GktV~I~G-~GnVG~~~A~~l~-~~GakVv-vsD~~~~--~-~~~a~---~~ga~-~v~~~ell~-----~~~DIliP~ 238 (355)
T 1c1d_A 174 DGLTVLVQG-LGAVGGSLASLAA-EAGAQLL-VADTDTE--R-VAHAV---ALGHT-AVALEDVLS-----TPCDVFAPC 238 (355)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSCHH--H-HHHHH---HTTCE-ECCGGGGGG-----CCCSEEEEC
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EEeCCcc--H-HHHHH---hcCCE-EeChHHhhc-----CccceecHh
Confidence 347899999 7999999999887 4589999 8886421 1 11111 12332 236677775 489998855
Q ss_pred cCchhH-HHHHHHHHHcCCcEEEeCCC--CCHHHHHHHHHHhhhcCeEEcC
Q 031216 114 TDASTV-YDNVKQATAFGMRSVVYVPH--IQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 114 T~p~~~-~~~~~~al~~G~~vVigttg--~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
.+.+.. .+.+. .-+..+|++... +++++. .++-++.+|++.+
T Consensus 239 A~~~~I~~~~~~---~lk~~iVie~AN~p~t~~eA---~~~L~~~gIlv~P 283 (355)
T 1c1d_A 239 AMGGVITTEVAR---TLDCSVVAGAANNVIADEAA---SDILHARGILYAP 283 (355)
T ss_dssp SCSCCBCHHHHH---HCCCSEECCSCTTCBCSHHH---HHHHHHTTCEECC
T ss_pred HHHhhcCHHHHh---hCCCCEEEECCCCCCCCHHH---HHHHHhCCEEEEC
Confidence 544433 34443 336788888773 343332 2445666777754
No 392
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=95.62 E-value=0.034 Score=46.84 Aligned_cols=82 Identities=21% Similarity=0.139 Sum_probs=51.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-.+|+|+| .|+||+.+++.+.. -|+++.+ +|+... + .. ..++ -+.++++++. ..|+|+...
T Consensus 148 gktvgIiG-lG~IG~~vA~~l~~-~G~~V~~-~d~~~~--~--~~-----~~~~-~~~~l~ell~------~aDvV~l~~ 208 (343)
T 2yq5_A 148 NLTVGLIG-VGHIGSAVAEIFSA-MGAKVIA-YDVAYN--P--EF-----EPFL-TYTDFDTVLK------EADIVSLHT 208 (343)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-ECSSCC--G--GG-----TTTC-EECCHHHHHH------HCSEEEECC
T ss_pred CCeEEEEe-cCHHHHHHHHHHhh-CCCEEEE-ECCChh--h--hh-----hccc-cccCHHHHHh------cCCEEEEcC
Confidence 46899999 79999999999874 5899874 565321 1 11 1122 2459999986 899998655
Q ss_pred C--chhH---HHHHHHHHHcCCcEEE
Q 031216 115 D--ASTV---YDNVKQATAFGMRSVV 135 (163)
Q Consensus 115 ~--p~~~---~~~~~~al~~G~~vVi 135 (163)
+ |+.. .......++.|.-+|-
T Consensus 209 Plt~~t~~li~~~~l~~mk~gailIN 234 (343)
T 2yq5_A 209 PLFPSTENMIGEKQLKEMKKSAYLIN 234 (343)
T ss_dssp CCCTTTTTCBCHHHHHHSCTTCEEEE
T ss_pred CCCHHHHHHhhHHHHhhCCCCcEEEE
Confidence 3 2221 1333344555655554
No 393
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.61 E-value=0.049 Score=46.83 Aligned_cols=87 Identities=21% Similarity=0.136 Sum_probs=52.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC--CcchhhhccCCCCCCccee--CCHHHHHhcccccCCccEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~--g~~~~~l~g~~~~~gi~v~--~~l~ell~~~~~~~~~DVV 110 (163)
..||.|+| .|+.|...++.+. ..|.++.+ .|.... ......+. ..|++++ .+.++.+. ..+|+|
T Consensus 9 ~k~v~viG-~G~sG~s~A~~l~-~~G~~V~~-~D~~~~~~~~~~~~L~----~~gi~~~~g~~~~~~~~-----~~~d~v 76 (451)
T 3lk7_A 9 NKKVLVLG-LARSGEAAARLLA-KLGAIVTV-NDGKPFDENPTAQSLL----EEGIKVVCGSHPLELLD-----EDFCYM 76 (451)
T ss_dssp TCEEEEEC-CTTTHHHHHHHHH-HTTCEEEE-EESSCGGGCHHHHHHH----HTTCEEEESCCCGGGGG-----SCEEEE
T ss_pred CCEEEEEe-eCHHHHHHHHHHH-hCCCEEEE-EeCCcccCChHHHHHH----hCCCEEEECCChHHhhc-----CCCCEE
Confidence 46899999 5999999887776 67899885 674321 11111221 3466665 23344443 138988
Q ss_pred EEcc-CchhHHHHHHHHHHcCCcEE
Q 031216 111 IDFT-DASTVYDNVKQATAFGMRSV 134 (163)
Q Consensus 111 IDfT-~p~~~~~~~~~al~~G~~vV 134 (163)
|-.+ .|... +.+..+.+.|++|+
T Consensus 77 v~spgi~~~~-p~~~~a~~~gi~v~ 100 (451)
T 3lk7_A 77 IKNPGIPYNN-PMVKKALEKQIPVL 100 (451)
T ss_dssp EECTTSCTTS-HHHHHHHHTTCCEE
T ss_pred EECCcCCCCC-hhHHHHHHCCCcEE
Confidence 8332 34333 44677788888875
No 394
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.60 E-value=0.024 Score=48.25 Aligned_cols=90 Identities=19% Similarity=0.237 Sum_probs=52.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhccCCCCCCcc--eeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCDMEQPLEIP--VMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~~g~~~~~l~g~~~~~gi~--v~~~l~ell~~~~~~~~~DVVI 111 (163)
..+|+|+|+ |.||+.+++.+... |+ ++. +++++. .+..++.. ..+.. -++++++++. .+|+||
T Consensus 167 g~~VlIiGa-G~iG~~~a~~l~~~-G~~~V~-v~~r~~--~ra~~la~---~~g~~~~~~~~l~~~l~------~aDvVi 232 (404)
T 1gpj_A 167 DKTVLVVGA-GEMGKTVAKSLVDR-GVRAVL-VANRTY--ERAVELAR---DLGGEAVRFDELVDHLA------RSDVVV 232 (404)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHH-CCSEEE-EECSSH--HHHHHHHH---HHTCEECCGGGHHHHHH------TCSEEE
T ss_pred CCEEEEECh-HHHHHHHHHHHHHC-CCCEEE-EEeCCH--HHHHHHHH---HcCCceecHHhHHHHhc------CCCEEE
Confidence 468999995 99999999998754 77 555 566542 12112211 11221 1357777774 899999
Q ss_pred EccCchhH---HHHHHH-HHH---cCCcEEEeCC
Q 031216 112 DFTDASTV---YDNVKQ-ATA---FGMRSVVYVP 138 (163)
Q Consensus 112 DfT~p~~~---~~~~~~-al~---~G~~vVigtt 138 (163)
++|..... .+.+.. +++ .+.-++++..
T Consensus 233 ~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 233 SATAAPHPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp ECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred EccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 98743222 144444 343 2455666653
No 395
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=95.60 E-value=0.22 Score=41.30 Aligned_cols=88 Identities=18% Similarity=0.282 Sum_probs=52.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCcc---EEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVID 112 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~D---VVID 112 (163)
..+.|+|++|.+|+.+++.+. ..+.+++.+..+..... ++ ...++++.+++. ..... +..|
T Consensus 46 k~vlVTGas~GIG~aia~~La-~~Ga~Vvl~~r~~~~~~---~l-----------~~~l~~~~~~~~-~~g~~~~~~~~D 109 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAA-KDGANIVIAAKTAQPHP---KL-----------LGTIYTAAEEIE-AVGGKALPCIVD 109 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCCSCCS---SS-----------CCCHHHHHHHHH-HTTCEEEEEECC
T ss_pred CEEEEeCCChHHHHHHHHHHH-HCCCEEEEEECChhhhh---hh-----------HHHHHHHHHHHH-hcCCeEEEEEcc
Confidence 569999999999999999998 46888775543321111 10 011222111100 01222 2357
Q ss_pred ccCchhHHHHHHHHHHc--CCcEEEeCCC
Q 031216 113 FTDASTVYDNVKQATAF--GMRSVVYVPH 139 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~--G~~vVigttg 139 (163)
.+.++...+.+..+.+. ++.+|+-..|
T Consensus 110 v~d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 110 VRDEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 88888887777766665 7888876654
No 396
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.55 E-value=0.02 Score=43.96 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=27.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
|.+|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~-~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLAR-AGHTVIGIDR 33 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CcEEEEeCCCcHHHHHHHHHHHh-CCCEEEEEeC
Confidence 45799999999999999999985 5788876543
No 397
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=95.54 E-value=0.046 Score=41.95 Aligned_cols=31 Identities=29% Similarity=0.386 Sum_probs=25.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
+.++.|+|++|.+|+.+++.+.+ .+.+++..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~-~G~~V~~~ 32 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALAR-DGYALALG 32 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCEEEEE
Confidence 45799999999999999999984 67886644
No 398
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=95.53 E-value=0.013 Score=46.72 Aligned_cols=57 Identities=25% Similarity=0.221 Sum_probs=27.7
Q ss_pred cccccccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 11 RMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
+-||-.|+-+.++=++...-..-...++.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~m~~l~gk~vlVTGas~gIG~aia~~la~-~G~~V~~-~~r 60 (266)
T 3uxy_A 4 HHHHSSGVDLGTENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRA-AGARVAV-ADR 60 (266)
T ss_dssp ----------------------CTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEE-CSS
T ss_pred cccCCCCCCCCCCCcchhhhhCCCCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEE-EeC
Confidence 44566666666655554433333346799999999999999999984 6888764 454
No 399
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=95.52 E-value=0.021 Score=46.99 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=28.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|.|+|++|.+|+.+++.+.+ .+.+++++..+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLG-KGYEVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHH-CCCEEEEEecC
Confidence 5899999999999999999985 57898876543
No 400
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.51 E-value=0.053 Score=47.59 Aligned_cols=116 Identities=9% Similarity=0.076 Sum_probs=77.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec-----CCCCcchhhhccC---C----C--------CCCcceeCC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-----HSVGEDIGMVCDM---E----Q--------PLEIPVMSD 93 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~-----~~~g~~~~~l~g~---~----~--------~~gi~v~~~ 93 (163)
+..||+|-| .|++|...++.+.+ .+.+++++.|+ .+.|-|..++.-+ . . ..+...+ +
T Consensus 238 ~g~~VaVQG-~GnVG~~aa~~L~e-~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v-~ 314 (456)
T 3r3j_A 238 ENKKCLVSG-SGNVAQYLVEKLIE-KGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF-E 314 (456)
T ss_dssp TTCCEEEEC-CSHHHHHHHHHHHH-HTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE-C
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe-C
Confidence 347899999 79999999998874 68999999995 2456655444210 0 0 0122222 3
Q ss_pred HHHHHhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEcC
Q 031216 94 LTMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 94 l~ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
.++++. .++|+++=+...... .+++....+.+..+|+|-. .++++..+ .-++.+|++.+
T Consensus 315 ~~~i~~-----~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~----iL~~rGI~~~P 376 (456)
T 3r3j_A 315 NQKPWN-----IPCDIAFPCATQNEINENDADLFIQNKCKMIVEGANMPTHIKALH----KLKQNNIILCP 376 (456)
T ss_dssp SCCGGG-----SCCSEEEECSCTTCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHH----HHHTTTCEEEC
T ss_pred Cccccc-----cCccEEEeCCCccchhhHHHHHHHhcCCeEEEecCCCCCCHHHHH----HHHHCCCEEeC
Confidence 356665 589999977766555 6788887788999999876 34555433 33456777653
No 401
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=95.50 E-value=0.032 Score=51.25 Aligned_cols=37 Identities=22% Similarity=0.192 Sum_probs=28.8
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~ 70 (163)
++..+.||+|+| .|.||..++..+. ..+++++ ++|++
T Consensus 308 ~~~~~~kV~VIG-aG~MG~~iA~~la-~aG~~V~-l~D~~ 344 (725)
T 2wtb_A 308 VPRKIKKVAIIG-GGLMGSGIATALI-LSNYPVI-LKEVN 344 (725)
T ss_dssp CCCCCCCEEEEC-CSHHHHHHHHHHH-TTTCCEE-EECSS
T ss_pred ccccCcEEEEEc-CCHhhHHHHHHHH-hCCCEEE-EEECC
Confidence 344567899999 5999999999887 4688876 46743
No 402
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=95.46 E-value=0.028 Score=44.81 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=27.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
..++.|+|++|.+|+.+++.+. ..|.+++...++
T Consensus 31 gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~ 64 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVN 64 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 3579999999999999999998 468887755443
No 403
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.38 E-value=0.054 Score=45.22 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=26.0
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
-||+|+| +|-||+.++.... ..|++++ ++|.
T Consensus 7 ~~VaViG-aG~MG~giA~~~a-~~G~~V~-l~D~ 37 (319)
T 3ado_A 7 GDVLIVG-SGLVGRSWAMLFA-SGGFRVK-LYDI 37 (319)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-HTTCCEE-EECS
T ss_pred CeEEEEC-CcHHHHHHHHHHH-hCCCeEE-EEEC
Confidence 4899999 5999999998876 5799877 6774
No 404
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=95.33 E-value=0.028 Score=47.01 Aligned_cols=62 Identities=19% Similarity=0.142 Sum_probs=42.7
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
..++||+| +|++|+.+++.+. .=++++.+ +|+.. .+... ..++ .+.++++++. ..|+|+...
T Consensus 141 g~tvGIiG-~G~IG~~va~~~~-~fg~~v~~-~d~~~--~~~~~------~~~~-~~~~l~ell~------~sDivslh~ 202 (334)
T 3kb6_A 141 RLTLGVIG-TGRIGSRVAMYGL-AFGMKVLC-YDVVK--REDLK------EKGC-VYTSLDELLK------ESDVISLHV 202 (334)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSSC--CHHHH------HTTC-EECCHHHHHH------HCSEEEECC
T ss_pred CcEEEEEC-cchHHHHHHHhhc-ccCceeee-cCCcc--chhhh------hcCc-eecCHHHHHh------hCCEEEEcC
Confidence 46899999 7999999999886 56899875 56432 11111 1122 3578999986 788887554
No 405
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=95.31 E-value=0.051 Score=43.56 Aligned_cols=59 Identities=25% Similarity=0.312 Sum_probs=27.1
Q ss_pred eecccccccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 9 HCRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
|-|-||-|.+-+--+=+++..-.......+.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r 60 (283)
T 3v8b_A 2 HHHHHHSSGVDLGTENLYFQSMMNQPSPVALITGAGSGIGRATALALAA-DGVTVGA-LGR 60 (283)
T ss_dssp -------------------------CCCEEEEESCSSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred CCccCCccccccccchhhhhhhcCCCCCEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EeC
Confidence 4455666655443332333222222235699999999999999999884 5888775 444
No 406
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=95.31 E-value=0.02 Score=49.04 Aligned_cols=60 Identities=17% Similarity=0.126 Sum_probs=42.5
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-.+|||+| .|+||+.+++.+. .-|+++.+ +|+... . . . ....+.++++++. ..|+|+..+
T Consensus 119 gktvGIIG-lG~IG~~vA~~l~-a~G~~V~~-~d~~~~-----~-~----~-~~~~~~sl~ell~------~aDiV~l~~ 178 (381)
T 3oet_A 119 DRTIGIVG-VGNVGSRLQTRLE-ALGIRTLL-CDPPRA-----A-R----G-DEGDFRTLDELVQ------EADVLTFHT 178 (381)
T ss_dssp GCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECHHHH-----H-T----T-CCSCBCCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-ECHHHHHHHHHHH-HCCCEEEE-ECCChH-----H-h----c-cCcccCCHHHHHh------hCCEEEEcC
Confidence 36899999 7999999999987 45899885 464210 0 0 0 1113578999986 799988555
No 407
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.30 E-value=0.029 Score=46.33 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=42.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhccCCCCCCccee---CCHHHHHhcccccCCccEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM---SDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~---~~l~ell~~~~~~~~~DVVI 111 (163)
+||+|+|++|.+|..++..+....- -+| .++|....-..+.++.....+..+..+ +|+++++. .+|+||
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev-~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~------~aDvVv 73 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRL-TLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLK------GCDVVV 73 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEE-EEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHT------TCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEE-EEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhC------CCCEEE
Confidence 5999999779999999988875432 344 467854310111222211111123332 47888774 899988
Q ss_pred Ecc
Q 031216 112 DFT 114 (163)
Q Consensus 112 DfT 114 (163)
...
T Consensus 74 i~a 76 (314)
T 1mld_A 74 IPA 76 (314)
T ss_dssp ECC
T ss_pred ECC
Confidence 543
No 408
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.27 E-value=0.16 Score=40.27 Aligned_cols=109 Identities=13% Similarity=0.092 Sum_probs=53.5
Q ss_pred ccccccccccceeeeccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcce-
Q 031216 12 MHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV- 90 (163)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v- 90 (163)
-||-|-.....+|+--.-+- ...||.|+| .|.+|..-++.+.+ .|.+++ ++++.. ...+.++.. ..++.+
T Consensus 10 ~~~~~~~~~~~~~~Pifl~L--~gk~VLVVG-gG~va~~ka~~Ll~-~GA~Vt-Vvap~~-~~~l~~l~~---~~~i~~i 80 (223)
T 3dfz_A 10 HHHSSGHIEGRHMYTVMLDL--KGRSVLVVG-GGTIATRRIKGFLQ-EGAAIT-VVAPTV-SAEINEWEA---KGQLRVK 80 (223)
T ss_dssp ------------CCEEEECC--TTCCEEEEC-CSHHHHHHHHHHGG-GCCCEE-EECSSC-CHHHHHHHH---TTSCEEE
T ss_pred cccccCcccccCccccEEEc--CCCEEEEEC-CCHHHHHHHHHHHH-CCCEEE-EECCCC-CHHHHHHHH---cCCcEEE
Confidence 45556666666654333332 336899999 59999999999875 467766 455432 122333332 223332
Q ss_pred eCCHHHHHhcccccCCccEEEEccCchhHHHHHHHHHHcCCcEE
Q 031216 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSV 134 (163)
Q Consensus 91 ~~~l~ell~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vV 134 (163)
..++++..- ..+|.||-.|.-......+....+.|++|-
T Consensus 81 ~~~~~~~dL-----~~adLVIaAT~d~~~N~~I~~~ak~gi~VN 119 (223)
T 3dfz_A 81 RKKVGEEDL-----LNVFFIVVATNDQAVNKFVKQHIKNDQLVN 119 (223)
T ss_dssp CSCCCGGGS-----SSCSEEEECCCCTHHHHHHHHHSCTTCEEE
T ss_pred ECCCCHhHh-----CCCCEEEECCCCHHHHHHHHHHHhCCCEEE
Confidence 233332211 489998866644444444433344777654
No 409
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=95.25 E-value=0.015 Score=50.26 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=30.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.|++|.|+|++|.+|+.+++.+ ...+.++.++..+
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L-~~~g~~V~~l~R~ 183 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEAL-QGYSHRIYCFIRA 183 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHT-BTTEEEEEEEEES
T ss_pred CCCeEEEECCccchHHHHHHHH-HhcCCEEEEEECC
Confidence 4689999999999999999998 4678899887654
No 410
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.24 E-value=0.085 Score=46.87 Aligned_cols=99 Identities=10% Similarity=0.076 Sum_probs=59.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCC----------------CCcc-h---h-hhccCCCCCCccee-CC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----------------VGED-I---G-MVCDMEQPLEIPVM-SD 93 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~----------------~g~~-~---~-~l~g~~~~~gi~v~-~~ 93 (163)
.||.|+| .|..|..+++.+. ..|+.=..++|.+. .|+. + . .+..+.....+..+ .+
T Consensus 33 ~~VlvvG-~GGlGseiak~La-~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~v~~~~~~ 110 (531)
T 1tt5_A 33 AHVCLIN-ATATGTEILKNLV-LPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES 110 (531)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-TTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSBCCEESSC
T ss_pred CeEEEEC-cCHHHHHHHHHHH-HcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 6899999 5999999999997 67887777889431 1211 0 0 01111001112222 34
Q ss_pred HHHHHhcc-cccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEe
Q 031216 94 LTMVLGSI-SQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVY 136 (163)
Q Consensus 94 l~ell~~~-~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVig 136 (163)
++++++.. .--..+|+|||++.+... ......|.+.++|+|.+
T Consensus 111 ~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 111 PENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 54321100 000378999999855444 55667899999999976
No 411
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=95.21 E-value=0.027 Score=51.68 Aligned_cols=37 Identities=11% Similarity=0.158 Sum_probs=29.1
Q ss_pred CCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC
Q 031216 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (163)
Q Consensus 31 ~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~ 70 (163)
++..+.||+|+| .|.||..++..+.+ .+++++ ++|++
T Consensus 310 ~~~~i~kV~VIG-aG~MG~~iA~~la~-aG~~V~-l~D~~ 346 (715)
T 1wdk_A 310 IAKDVKQAAVLG-AGIMGGGIAYQSAS-KGTPIL-MKDIN 346 (715)
T ss_dssp TCCCCSSEEEEC-CHHHHHHHHHHHHH-TTCCEE-EECSS
T ss_pred ccccCCEEEEEC-CChhhHHHHHHHHh-CCCEEE-EEECC
Confidence 455567899999 59999999998874 588876 56753
No 412
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=95.19 E-value=0.11 Score=41.33 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 30 k~vlVTGas~gIG~aia~~L~~-~G~~V~~-~~r 61 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLE-AGARVFI-CAR 61 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-ECS
T ss_pred CEEEEeCCCChHHHHHHHHHHH-CCCEEEE-EeC
Confidence 5799999999999999999985 5788764 454
No 413
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=95.18 E-value=0.093 Score=47.06 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=28.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+++|.|+|++|.+|+.+++.+.+ .+.+++++..
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~-~G~~V~~~~r 43 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIE-NGYDCVVADN 43 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CcCEEEEEEC
Confidence 46899999999999999999985 5788887544
No 414
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.18 E-value=0.056 Score=44.93 Aligned_cols=96 Identities=13% Similarity=0.091 Sum_probs=54.0
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee-CCHHHHHhcccccCCccEEEEcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-SDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~-~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-+|.|+|++|.+|...++.+....+.+++++..+.. -.+...-+|.. .+.-+ +++.+.+.+. ....+|+|+|++
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~-~~~~~~~lGad---~vi~~~~~~~~~v~~~-~~~g~Dvvid~~ 247 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPE-TQEWVKSLGAH---HVIDHSKPLAAEVAAL-GLGAPAFVFSTT 247 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHH-HHHHHHHTTCS---EEECTTSCHHHHHHTT-CSCCEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHHHHcCCC---EEEeCCCCHHHHHHHh-cCCCceEEEECC
Confidence 579999988999999988877557888886544221 01111112210 11111 2444444321 124799999988
Q ss_pred CchhHHHHHHHHHHcC-CcEEEe
Q 031216 115 DASTVYDNVKQATAFG-MRSVVY 136 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G-~~vVig 136 (163)
-.....+.+..+++.+ .-+++|
T Consensus 248 g~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 248 HTDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp CHHHHHHHHHHHSCTTCEEEECS
T ss_pred CchhhHHHHHHHhcCCCEEEEEC
Confidence 6555555555555554 433444
No 415
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=95.14 E-value=0.076 Score=42.21 Aligned_cols=30 Identities=37% Similarity=0.637 Sum_probs=25.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
..+.|+|++|.+|+.+++.+.+ .|.+++..
T Consensus 29 k~~lVTGas~GIG~aia~~la~-~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELAR-RGAMVIGT 58 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEE
Confidence 5689999999999999999884 58887754
No 416
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=95.12 E-value=0.14 Score=39.97 Aligned_cols=33 Identities=9% Similarity=0.158 Sum_probs=26.7
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
+..+|.|+|++|.+|+.+++.+.+ .|.+++.+.
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~-~G~~V~~~~ 53 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKS-KSWNTISID 53 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEe
Confidence 346799999999999999999884 688876543
No 417
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=95.11 E-value=0.2 Score=38.15 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=28.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|.|+|++|.+|+.+++.+.+ .+.+++.+.++
T Consensus 2 k~vlITGasggiG~~~a~~l~~-~G~~v~~~~~r 34 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAE-DGFALAIHYGQ 34 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHT-TTCEEEEEESS
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCC
Confidence 4799999999999999999985 68888876554
No 418
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=95.03 E-value=0.3 Score=38.35 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=28.0
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+..+|.|+|++|.+|+.+++.+. ..+.+++.+..
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r 61 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLA-SMGLKVWINYR 61 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeC
Confidence 34679999999999999999998 46888876544
No 419
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.00 E-value=0.032 Score=45.51 Aligned_cols=99 Identities=10% Similarity=0.085 Sum_probs=53.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeC---------CH-HHHHhccccc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS---------DL-TMVLGSISQS 104 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~---------~l-~ell~~~~~~ 104 (163)
++||+|+| .|.||..++..+. .+.++.. +++.. .....+. ..|+.+.. +. ++..
T Consensus 2 ~mkI~IiG-aGa~G~~~a~~L~--~g~~V~~-~~r~~--~~~~~l~----~~G~~~~~~~~~~~~~~~~~~~~~------ 65 (307)
T 3ego_A 2 SLKIGIIG-GGSVGLLCAYYLS--LYHDVTV-VTRRQ--EQAAAIQ----SEGIRLYKGGEEFRADCSADTSIN------ 65 (307)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH--TTSEEEE-ECSCH--HHHHHHH----HHCEEEEETTEEEEECCEEESSCC------
T ss_pred CCEEEEEC-CCHHHHHHHHHHh--cCCceEE-EECCH--HHHHHHH----hCCceEecCCCeeccccccccccc------
Confidence 57999999 5999999999887 6778774 44421 1111110 01111110 00 1222
Q ss_pred CCccEEEEccCchhHHHHHHHHHHcC-CcEEEeCCCCCHHHHHHHHHH
Q 031216 105 KARAVVIDFTDASTVYDNVKQATAFG-MRSVVYVPHIQLETVSALSAF 151 (163)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~~G-~~vVigttg~~~e~~~~L~~~ 151 (163)
.++|+||-++.|....+.+......+ ..+|+-.-|++.+ +.|.++
T Consensus 66 ~~~D~vilavK~~~~~~~l~~l~~~~~~~ivs~~nGi~~~--e~l~~~ 111 (307)
T 3ego_A 66 SDFDLLVVTVKQHQLQSVFSSLERIGKTNILFLQNGMGHI--HDLKDW 111 (307)
T ss_dssp SCCSEEEECCCGGGHHHHHHHTTSSCCCEEEECCSSSHHH--HHHHTC
T ss_pred CCCCEEEEEeCHHHHHHHHHHhhcCCCCeEEEecCCccHH--HHHHHh
Confidence 48999996666666555554432222 2266655588643 345444
No 420
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=95.00 E-value=0.018 Score=49.28 Aligned_cols=60 Identities=17% Similarity=0.126 Sum_probs=42.4
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
..+|||+| .|+||+.+++.+. .-|+++.+ +|+... . . + .+. .+.++++++. ..|+|+..+
T Consensus 116 g~tvGIIG-lG~IG~~vA~~l~-~~G~~V~~-~d~~~~--~--~--~----~g~-~~~~l~ell~------~aDvV~l~~ 175 (380)
T 2o4c_A 116 ERTYGVVG-AGQVGGRLVEVLR-GLGWKVLV-CDPPRQ--A--R--E----PDG-EFVSLERLLA------EADVISLHT 175 (380)
T ss_dssp GCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECHHHH--H--H--S----TTS-CCCCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-CCHHHHHHHHHHH-HCCCEEEE-EcCChh--h--h--c----cCc-ccCCHHHHHH------hCCEEEEec
Confidence 46899999 7999999999987 46899874 664210 0 0 0 111 2468999885 799988654
No 421
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.97 E-value=0.021 Score=46.66 Aligned_cols=33 Identities=9% Similarity=0.096 Sum_probs=25.2
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~ 70 (163)
..|+.|+| +|.||+.++..+.+ .+. ++. +++++
T Consensus 117 ~k~vlvlG-aGg~g~aia~~L~~-~G~~~v~-v~~R~ 150 (277)
T 3don_A 117 DAYILILG-AGGASKGIANELYK-IVRPTLT-VANRT 150 (277)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHT-TCCSCCE-EECSC
T ss_pred CCEEEEEC-CcHHHHHHHHHHHH-CCCCEEE-EEeCC
Confidence 46899999 59999999999874 566 444 56654
No 422
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.96 E-value=0.11 Score=42.31 Aligned_cols=71 Identities=18% Similarity=0.140 Sum_probs=41.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCC-cEEEEEEecCCC---C--cchhhhccCCCCCCcce-eCCHHHHHhcccccCCc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSV---G--EDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKAR 107 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~-~eLvgvid~~~~---g--~~~~~l~g~~~~~gi~v-~~~l~ell~~~~~~~~~ 107 (163)
|+||+|+| .|.||..++..+....- .+++ ++|+... + .+........ ...+.+ .+++ +.+ .++
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~-l~d~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~d~-~~~------~~a 70 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYV-FIDANEAKVKADQIDFQDAMANL-EAHGNIVINDW-AAL------ADA 70 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEE-EECSSHHHHHHHHHHHHHHGGGS-SSCCEEEESCG-GGG------TTC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEE-EEcCCHHHHHHHHHHHHhhhhhc-CCCeEEEeCCH-HHh------CCC
Confidence 57999999 59999999998875431 3554 6675321 0 0111110000 112344 4677 445 389
Q ss_pred cEEEEccC
Q 031216 108 AVVIDFTD 115 (163)
Q Consensus 108 DVVIDfT~ 115 (163)
|+||.++.
T Consensus 71 DvViiav~ 78 (309)
T 1hyh_A 71 DVVISTLG 78 (309)
T ss_dssp SEEEECCS
T ss_pred CEEEEecC
Confidence 99996654
No 423
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.90 E-value=0.053 Score=44.67 Aligned_cols=70 Identities=20% Similarity=0.261 Sum_probs=40.4
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCc--EEEEEEecCC--CCcchhhhccCCCCCCcceeCCHHHHHhcccccCCc
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR 107 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~--eLvgvid~~~--~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~ 107 (163)
+..+.||+|+|+ |.||..++..+.. .++ +|+ ++|... .|. +.++.... ...+..+.|+ +.+ ..+
T Consensus 11 ~~~~~kV~ViGa-G~vG~~~a~~l~~-~g~~~ev~-L~Di~~~~~g~-a~dl~~~~-~~~i~~t~d~-~~l------~~a 78 (303)
T 2i6t_A 11 NKTVNKITVVGG-GELGIACTLAISA-KGIADRLV-LLDLSEGTKGA-TMDLEIFN-LPNVEISKDL-SAS------AHS 78 (303)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHH-HTCCSEEE-EECCC-----C-HHHHHHHT-CTTEEEESCG-GGG------TTC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHh-cCCCCEEE-EEcCCcchHHH-HHHHhhhc-CCCeEEeCCH-HHH------CCC
Confidence 345689999995 9999998888764 455 555 678532 111 11222111 2255566777 434 378
Q ss_pred cEEEEc
Q 031216 108 AVVIDF 113 (163)
Q Consensus 108 DVVIDf 113 (163)
|+||..
T Consensus 79 D~Vi~a 84 (303)
T 2i6t_A 79 KVVIFT 84 (303)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 888754
No 424
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=94.89 E-value=0.079 Score=42.04 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=27.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
..+.|+|++|.+|+.+++.+.+ .|.+++...++
T Consensus 28 k~~lVTGas~GIG~aia~~la~-~G~~Vv~~~~~ 60 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLAS-DGFTVVINYAG 60 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-HTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEcCC
Confidence 4699999999999999999885 58888765443
No 425
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=94.89 E-value=0.24 Score=38.27 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=26.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+.
T Consensus 13 k~vlVTGasggiG~~~a~~l~~-~G~~V~~~~ 43 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVG-QGASAVLLD 43 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEe
Confidence 5799999999999999999985 588887643
No 426
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=94.89 E-value=0.077 Score=42.72 Aligned_cols=57 Identities=23% Similarity=0.187 Sum_probs=27.5
Q ss_pred eecccccccccccceeeeccCCCC---CCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 9 HCRMHHISQNVKAKRFISCSTNPP---QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
|-.-||-|-.+|-.+.+.-.-.+. -...++.|+|++|.+|+.+++.+.+ .+.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~L~~-~G~~V~~~ 64 (291)
T 3cxt_A 5 HHHHHHSSGLVPRGSHMNQQFSLDQFSLKGKIALVTGASYGIGFAIASAYAK-AGATIVFN 64 (291)
T ss_dssp -------------------CCCGGGGCCTTCEEEEETCSSHHHHHHHHHHHH-TTCEEEEE
T ss_pred cccccccccccCHhHHhccccCccccCCCCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEE
Confidence 334567776666555544322111 1225799999999999999999985 58887754
No 427
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=94.89 E-value=0.18 Score=38.44 Aligned_cols=31 Identities=29% Similarity=0.375 Sum_probs=26.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
.+|.|+|++|.+|+.+++.+.+ .+.+++.+.
T Consensus 6 k~vlVtGasggiG~~~a~~l~~-~G~~V~~~~ 36 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHA-KGYRVGLMA 36 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEEE
Confidence 4699999999999999999985 688877543
No 428
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=94.85 E-value=0.08 Score=42.32 Aligned_cols=32 Identities=28% Similarity=0.294 Sum_probs=26.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .|.+++. +++
T Consensus 30 k~vlVTGas~gIG~aia~~la~-~G~~V~~-~~r 61 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLAD-EGCHVLC-ADI 61 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHH-TTCEEEE-EES
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeC
Confidence 5699999999999999999874 5888775 444
No 429
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=94.84 E-value=0.038 Score=42.85 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=26.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
..++.|+|++|.+|+.+++.+.+ .+.+++.+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~ 38 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRA-RNWWVASID 38 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-TTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCEEEEEe
Confidence 35799999999999999999984 588877543
No 430
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.80 E-value=0.32 Score=40.33 Aligned_cols=96 Identities=10% Similarity=0.064 Sum_probs=54.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee--CCHHHHHhcccccCCccEEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVVID 112 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~--~~l~ell~~~~~~~~~DVVID 112 (163)
.-+|.|+|++|.+|...++.+. ..+.++++..+.. -.+...-+|. ..+.-+ .++.+.+.++.. ..+|+++|
T Consensus 165 g~~VlV~Ga~G~vG~~a~qla~-~~Ga~Vi~~~~~~--~~~~~~~lGa---~~vi~~~~~~~~~~v~~~t~-g~~d~v~d 237 (371)
T 3gqv_A 165 PVYVLVYGGSTATATVTMQMLR-LSGYIPIATCSPH--NFDLAKSRGA---EEVFDYRAPNLAQTIRTYTK-NNLRYALD 237 (371)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECGG--GHHHHHHTTC---SEEEETTSTTHHHHHHHHTT-TCCCEEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCHH--HHHHHHHcCC---cEEEECCCchHHHHHHHHcc-CCccEEEE
Confidence 3579999988999999888776 6788998876321 1122221221 111112 233333322111 25999999
Q ss_pred ccCchhHHHHHHHHH-H-cCCcEEEeC
Q 031216 113 FTDASTVYDNVKQAT-A-FGMRSVVYV 137 (163)
Q Consensus 113 fT~p~~~~~~~~~al-~-~G~~vVigt 137 (163)
++-.....+.+..++ + .|.-+.+|.
T Consensus 238 ~~g~~~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 238 CITNVESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp SSCSHHHHHHHHHHSCTTCEEEEESSC
T ss_pred CCCchHHHHHHHHHhhcCCCEEEEEec
Confidence 986655555565565 3 455555553
No 431
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.78 E-value=0.077 Score=39.71 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=25.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
-+|.|+|++|.+|+.+++.+.. .+.+++++.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~-~G~~V~~~~ 70 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKM-IGARIYTTA 70 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-HTCEEEEEE
T ss_pred CEEEEeeCCChHHHHHHHHHHH-cCCEEEEEe
Confidence 5799999899999999988774 578877543
No 432
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=94.76 E-value=0.33 Score=38.06 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=27.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|.|+|++|.+|+.+++.+. ..+.+++...++
T Consensus 27 k~vlITGas~gIG~a~a~~l~-~~G~~V~~~~~~ 59 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAA-RQGWRVGVNYAA 59 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCC
Confidence 469999999999999999987 468888765554
No 433
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.73 E-value=0.033 Score=42.57 Aligned_cols=32 Identities=28% Similarity=0.409 Sum_probs=26.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+..
T Consensus 3 k~vlVtGasggiG~~la~~l~~-~G~~V~~~~r 34 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKA-RGYRVVVLDL 34 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-HTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHH-CCCEEEEEcc
Confidence 5799999999999999999985 4788876543
No 434
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=94.71 E-value=0.23 Score=38.57 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=28.6
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
++.++.|+|++|.+|+.+++.+.+ .+.+++.+.++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~-~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLA-KGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred ccCEEEEeCCCchhHHHHHHHHHH-CCCEEEEEcCC
Confidence 346799999999999999999984 58888865544
No 435
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.70 E-value=0.066 Score=41.22 Aligned_cols=32 Identities=28% Similarity=0.249 Sum_probs=26.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+..
T Consensus 4 k~vlITGas~gIG~~~a~~l~~-~G~~V~~~~r 35 (236)
T 1ooe_A 4 GKVIVYGGKGALGSAILEFFKK-NGYTVLNIDL 35 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-TTEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEEec
Confidence 5799999999999999999985 5888876543
No 436
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=94.69 E-value=0.24 Score=39.34 Aligned_cols=30 Identities=30% Similarity=0.377 Sum_probs=25.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
.+|.|+|++|.+|+.+++.+.+ .+.+++.+
T Consensus 19 k~vlVTGasggIG~~la~~l~~-~G~~V~~~ 48 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLE-LGSNVVIA 48 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEE
Confidence 5799999999999999999985 67887754
No 437
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=94.67 E-value=0.056 Score=41.89 Aligned_cols=70 Identities=17% Similarity=0.162 Sum_probs=42.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEcc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT 114 (163)
|.++.|+|++|.+|+.+++.+.+ .+.+++.+ +++....+. . . ..++.-.++++++++.. ..++|+||...
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~-~G~~V~~~-~r~~~~~~~-~---~--~~Dl~~~~~v~~~~~~~--~~~id~lv~~A 70 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEA-AGHQIVGI-DIRDAEVIA-D---L--STAEGRKQAIADVLAKC--SKGMDGLVLCA 70 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ESSSSSEEC-C---T--TSHHHHHHHHHHHHTTC--TTCCSEEEECC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE-eCCchhhcc-c---c--ccCCCCHHHHHHHHHHh--CCCCCEEEECC
Confidence 45799999999999999999985 68887764 433211100 0 0 11222223455555421 03679999865
No 438
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.67 E-value=0.2 Score=40.45 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=26.1
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCc--EEEEEEecC
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSH 70 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~--eLvgvid~~ 70 (163)
+..++||+|+|+ |.||..++..+.. .+. +++ ++|+.
T Consensus 4 ~~~~mkI~IiGa-G~vG~~~a~~l~~-~g~~~~V~-l~d~~ 41 (319)
T 1lld_A 4 TVKPTKLAVIGA-GAVGSTLAFAAAQ-RGIAREIV-LEDIA 41 (319)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHH-TTCCSEEE-EECSS
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHh-CCCCCEEE-EEeCC
Confidence 345689999995 9999999988874 455 765 66753
No 439
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.67 E-value=0.061 Score=44.17 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=42.8
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC---CcchhhhccC----CCCCCcceeCCHHHHHhcccccCCc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV---GEDIGMVCDM----EQPLEIPVMSDLTMVLGSISQSKAR 107 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~---g~~~~~l~g~----~~~~gi~v~~~l~ell~~~~~~~~~ 107 (163)
++||+|+|+ |.||..++..+....-++ +.++|.... |. +.++... .....+..++|+ +.+ .++
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~-v~L~Di~~~~~~g~-~~dl~~~~~~~~~~~~i~~t~d~-~a~------~~a 71 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGK-ALDLYEASPIEGFDVRVTGTNNY-ADT------ANS 71 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHH-HHHHHTTHHHHTCCCCEEEESCG-GGG------TTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCe-EEEEeCCccHHHHH-HHhHHHhHhhcCCCeEEEECCCH-HHH------CCC
Confidence 469999996 999999999887554348 778885421 11 1111110 002234445787 455 389
Q ss_pred cEEEEcc
Q 031216 108 AVVIDFT 114 (163)
Q Consensus 108 DVVIDfT 114 (163)
|+||...
T Consensus 72 D~Vi~a~ 78 (309)
T 1ur5_A 72 DVIVVTS 78 (309)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9999653
No 440
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.64 E-value=0.02 Score=47.17 Aligned_cols=96 Identities=17% Similarity=0.200 Sum_probs=49.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee-CCHHHHHhcccccCCccEEEEcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-SDLTMVLGSISQSKARAVVIDFT 114 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~-~~l~ell~~~~~~~~~DVVIDfT 114 (163)
-+|.|+|++|.+|...++.+. ..+.+++++..+.. ..+...-+|.. .+.-+ .++.+.+.+...+..+|++||++
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~-~~Ga~Vi~~~~~~~-~~~~~~~~ga~---~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAK-GMGAKVIAVVNRTA-ATEFVKSVGAD---IVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSGG-GHHHHHHHTCS---EEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeCCHH-HHHHHHhcCCc---EEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 479999988999999988876 56888886654321 11111112211 11111 34433332221224799999987
Q ss_pred CchhHHHHHHHHHHcCCcEEEe
Q 031216 115 DASTVYDNVKQATAFGMRSVVY 136 (163)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVig 136 (163)
-.+.....+......|.-+++|
T Consensus 236 g~~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 236 GGPAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp C--CHHHHHHTEEEEEEEEEC-
T ss_pred chhHHHHHHHhhcCCCEEEEEE
Confidence 5443333333223334444444
No 441
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=94.64 E-value=0.1 Score=40.49 Aligned_cols=32 Identities=31% Similarity=0.518 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .|.+++. +++
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~-~G~~V~~-~~r 35 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVE-RGHQVSM-MGR 35 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EEC
Confidence 5799999999999999999984 6888775 444
No 442
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=94.62 E-value=0.39 Score=37.87 Aligned_cols=89 Identities=18% Similarity=0.228 Sum_probs=51.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhccc-ccCCcc-EEEEc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSIS-QSKARA-VVIDF 113 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~-~~~~~D-VVIDf 113 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+ +++... ..++ ...+++....+. ...++. +..|.
T Consensus 7 k~~lVTGas~GIG~aia~~la~-~G~~V~~~-~r~~~~--~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv 71 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAAR-DGANVAIA-AKSAVA--NPKL-----------PGTIHSAAAAVNAAGGQGLALKCDI 71 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ESCCSC--CTTS-----------CCCHHHHHHHHHHHTSEEEEEECCT
T ss_pred cEEEEECCCChHHHHHHHHHHH-CCCEEEEE-eccchh--hhhh-----------HHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 5799999999999999999985 57887754 433210 0010 012222111000 001111 34577
Q ss_pred cCchhHHHHHHHHHHc--CCcEEEeCCC
Q 031216 114 TDASTVYDNVKQATAF--GMRSVVYVPH 139 (163)
Q Consensus 114 T~p~~~~~~~~~al~~--G~~vVigttg 139 (163)
+.++...+.+....+. ++.+++-..|
T Consensus 72 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG 99 (274)
T 3e03_A 72 REEDQVRAAVAATVDTFGGIDILVNNAS 99 (274)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7787777766666554 6888876654
No 443
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=94.61 E-value=0.16 Score=40.43 Aligned_cols=32 Identities=31% Similarity=0.331 Sum_probs=26.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 28 k~vlVTGas~GIG~aia~~l~~-~G~~V~~-~~r 59 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAK-NGAYVVV-ADV 59 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeC
Confidence 5799999999999999999984 6888774 444
No 444
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.54 E-value=0.096 Score=37.82 Aligned_cols=31 Identities=19% Similarity=0.348 Sum_probs=25.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|.|+| .|++|+.+++.+.+ .+.+++. +|+
T Consensus 4 ~~vlI~G-~G~vG~~la~~L~~-~g~~V~v-id~ 34 (153)
T 1id1_A 4 DHFIVCG-HSILAINTILQLNQ-RGQNVTV-ISN 34 (153)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHH-TTCCEEE-EEC
T ss_pred CcEEEEC-CCHHHHHHHHHHHH-CCCCEEE-EEC
Confidence 4799999 59999999999875 5788875 454
No 445
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=94.54 E-value=0.33 Score=38.60 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=26.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+. ..|.+++. +++
T Consensus 26 k~~lVTGas~GIG~~ia~~la-~~G~~V~~-~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLA-KAGANIVL-NGF 57 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEE-ECC
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEE-EeC
Confidence 579999999999999999998 46788774 443
No 446
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=94.51 E-value=0.032 Score=49.08 Aligned_cols=91 Identities=9% Similarity=0.062 Sum_probs=54.1
Q ss_pred ccCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCC
Q 031216 27 CSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (163)
Q Consensus 27 ~~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~ 106 (163)
++++..-.-.+|+|+| .|++|+.+++.+. .-|+++. ++|++.. ...+.. ..++. +.++++++. .
T Consensus 239 Ratg~~L~GKTVgVIG-~G~IGr~vA~~lr-afGa~Vi-v~d~dp~--~a~~A~----~~G~~-vv~LeElL~------~ 302 (464)
T 3n58_A 239 RGTDVMMAGKVAVVCG-YGDVGKGSAQSLA-GAGARVK-VTEVDPI--CALQAA----MDGFE-VVTLDDAAS------T 302 (464)
T ss_dssp HHHCCCCTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSHH--HHHHHH----HTTCE-ECCHHHHGG------G
T ss_pred HhcCCcccCCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EEeCCcc--hhhHHH----hcCce-eccHHHHHh------h
Confidence 4455555557899999 7999999999987 4578876 4554221 111100 12333 347999885 8
Q ss_pred ccEEEEccC-chhHHHHHHHHHHcCCcE
Q 031216 107 RAVVIDFTD-ASTVYDNVKQATAFGMRS 133 (163)
Q Consensus 107 ~DVVIDfT~-p~~~~~~~~~al~~G~~v 133 (163)
.|+|+..+- +..........++.|.-+
T Consensus 303 ADIVv~atgt~~lI~~e~l~~MK~GAIL 330 (464)
T 3n58_A 303 ADIVVTTTGNKDVITIDHMRKMKDMCIV 330 (464)
T ss_dssp CSEEEECCSSSSSBCHHHHHHSCTTEEE
T ss_pred CCEEEECCCCccccCHHHHhcCCCCeEE
Confidence 999997652 222223333344445433
No 447
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.50 E-value=0.028 Score=45.03 Aligned_cols=108 Identities=11% Similarity=0.044 Sum_probs=60.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCcc-EEEEc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~D-VVIDf 113 (163)
++||+|+| .|.||..+++.+.+ .+.++++. ++...-.+.. ++..+ .+.+.+++..+...-+++ +|+|+
T Consensus 6 ~mkI~IIG-~G~~G~sLA~~L~~-~G~~V~~~-~~~~~~~~aD-ilavP-------~~ai~~vl~~l~~~l~~g~ivvd~ 74 (232)
T 3dfu_A 6 RLRVGIFD-DGSSTVNMAEKLDS-VGHYVTVL-HAPEDIRDFE-LVVID-------AHGVEGYVEKLSAFARRGQMFLHT 74 (232)
T ss_dssp CCEEEEEC-CSCCCSCHHHHHHH-TTCEEEEC-SSGGGGGGCS-EEEEC-------SSCHHHHHHHHHTTCCTTCEEEEC
T ss_pred CcEEEEEe-eCHHHHHHHHHHHH-CCCEEEEe-cCHHHhccCC-EEEEc-------HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 47999999 69999999999875 58888754 4321101111 22211 123444443322112344 77886
Q ss_pred c--CchhHHHHHHHHHHcCCcEEEeCC---------CCCHHHHHHHHHHhhhcC
Q 031216 114 T--DASTVYDNVKQATAFGMRSVVYVP---------HIQLETVSALSAFCDKAS 156 (163)
Q Consensus 114 T--~p~~~~~~~~~al~~G~~vVigtt---------g~~~e~~~~L~~~A~~~~ 156 (163)
+ .+....+ .+.+.|..+|-+-| +.+++..+.++++.+..|
T Consensus 75 sgs~~~~vl~---~~~~~g~~fvg~HPm~g~~~~i~a~d~~a~~~l~~L~~~lG 125 (232)
T 3dfu_A 75 SLTHGITVMD---PLETSGGIVMSAHPIGQDRWVASALDELGETIVGLLVGELG 125 (232)
T ss_dssp CSSCCGGGGH---HHHHTTCEEEEEEEEETTEEEEEESSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHH---HHHhCCCcEEEeeeCCCCceeeeCCCHHHHHHHHHHHHHhC
Confidence 5 3433333 33466775442222 235666788888888765
No 448
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.45 E-value=0.029 Score=46.22 Aligned_cols=95 Identities=17% Similarity=0.080 Sum_probs=52.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEEEccC
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVIDfT~ 115 (163)
-+|.|+|++|.+|...++.+. ..+.+++++ .+... .+...-+|.. . +.-..++.+.+.+......+|+++|++-
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~-~~Ga~Vi~~-~~~~~-~~~~~~lGa~--~-i~~~~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIAL-ARGARVFAT-ARGSD-LEYVRDLGAT--P-IDASREPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEE-ECHHH-HHHHHHHTSE--E-EETTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CEEEEecCCCHHHHHHHHHHH-HCCCEEEEE-eCHHH-HHHHHHcCCC--E-eccCCCHHHHHHHHhcCCCceEEEECCC
Confidence 479999988999999988776 678899887 43211 1111112211 1 1111344443322112357999999886
Q ss_pred chhHHHHHHHHHHc-CCcEEEeC
Q 031216 116 ASTVYDNVKQATAF-GMRSVVYV 137 (163)
Q Consensus 116 p~~~~~~~~~al~~-G~~vVigt 137 (163)
.+. .+.+..+++. |.-+++|.
T Consensus 226 ~~~-~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 226 GPV-LDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp THH-HHHHHHHEEEEEEEEESCC
T ss_pred cHH-HHHHHHHHhcCCeEEEEcc
Confidence 543 3334444444 44333443
No 449
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.44 E-value=0.17 Score=44.07 Aligned_cols=88 Identities=10% Similarity=0.101 Sum_probs=52.1
Q ss_pred CCCCeeEEEEcCCCHHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHH-HHHhcccccCCccE
Q 031216 32 PQSNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT-MVLGSISQSKARAV 109 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~-i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~-ell~~~~~~~~~DV 109 (163)
+.++.||.|+| .|+.|.. +++.+. ..|.++.+ .|.... .....+. ..|++++...+ +.+ ..+|+
T Consensus 19 ~~~~~~v~viG-iG~sG~s~~A~~l~-~~G~~V~~-~D~~~~-~~~~~l~----~~gi~~~~g~~~~~~------~~~d~ 84 (494)
T 4hv4_A 19 MRRVRHIHFVG-IGGAGMGGIAEVLA-NEGYQISG-SDLAPN-SVTQHLT----ALGAQIYFHHRPENV------LDASV 84 (494)
T ss_dssp ---CCEEEEET-TTSTTHHHHHHHHH-HTTCEEEE-ECSSCC-HHHHHHH----HTTCEEESSCCGGGG------TTCSE
T ss_pred hccCCEEEEEE-EcHhhHHHHHHHHH-hCCCeEEE-EECCCC-HHHHHHH----HCCCEEECCCCHHHc------CCCCE
Confidence 44567999999 5999985 677665 67999885 674321 1112221 45666653222 223 37898
Q ss_pred EEEcc--CchhHHHHHHHHHHcCCcEEE
Q 031216 110 VIDFT--DASTVYDNVKQATAFGMRSVV 135 (163)
Q Consensus 110 VIDfT--~p~~~~~~~~~al~~G~~vVi 135 (163)
|| .| .|.. .+.+..|.++|++|+.
T Consensus 85 vV-~Spgi~~~-~p~~~~a~~~gi~v~~ 110 (494)
T 4hv4_A 85 VV-VSTAISAD-NPEIVAAREARIPVIR 110 (494)
T ss_dssp EE-ECTTSCTT-CHHHHHHHHTTCCEEE
T ss_pred EE-ECCCCCCC-CHHHHHHHHCCCCEEc
Confidence 88 44 2333 3456667788888764
No 450
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=94.42 E-value=0.058 Score=42.82 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=27.5
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
...+|.|+|++|.+|+.+++.+.+ .|.+++.+.
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~-~G~~V~~~~ 45 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVR-YGAKVVSVS 45 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEe
Confidence 346899999999999999999884 688887543
No 451
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=94.41 E-value=0.11 Score=41.15 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=26.2
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .|.+++. +++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~-~G~~V~~-~~r 59 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLE-HGHRVII-SYR 59 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHH-TTCCEEE-EES
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EeC
Confidence 4689999999999999999885 5788775 444
No 452
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=94.40 E-value=0.48 Score=36.77 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=26.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.. ++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~-~G~~V~~~-~r 39 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQ-EGATVLGL-DL 39 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEE-ES
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE-eC
Confidence 4689999999999999999984 68887754 43
No 453
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.37 E-value=0.058 Score=44.64 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=45.2
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCc------EEEEEEecC----C---CCcchhhhccC--CCCCCcceeCCHHHHH
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGM------EVAGAIDSH----S---VGEDIGMVCDM--EQPLEIPVMSDLTMVL 98 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~------eLvgvid~~----~---~g~~~~~l~g~--~~~~gi~v~~~l~ell 98 (163)
.++||+|+|++|.+|+.++..+....-+ +|+. +|.. . .| .+.++... ....++..++++.+++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l-~Di~~~~~~~~~~g-~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQL-LEIPNEKAQKALQG-VMMEIDDCAFPLLAGMTAHADPMTAF 81 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEE-ECCSCHHHHHHHHH-HHHHHHTTTCTTEEEEEEESSHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEE-EcCCCccccccchh-hHHHHhhhcccccCcEEEecCcHHHh
Confidence 4589999998899999999888754322 6664 7754 1 11 01112110 0011344557888888
Q ss_pred hcccccCCccEEEEcc
Q 031216 99 GSISQSKARAVVIDFT 114 (163)
Q Consensus 99 ~~~~~~~~~DVVIDfT 114 (163)
. .+|+||...
T Consensus 82 ~------~aD~Vi~~a 91 (329)
T 1b8p_A 82 K------DADVALLVG 91 (329)
T ss_dssp T------TCSEEEECC
T ss_pred C------CCCEEEEeC
Confidence 4 899988653
No 454
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.36 E-value=0.17 Score=39.58 Aligned_cols=32 Identities=34% Similarity=0.433 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r 40 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVR-EGATVAI-ADI 40 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeC
Confidence 4799999999999999999984 5888764 454
No 455
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=94.35 E-value=0.36 Score=39.50 Aligned_cols=88 Identities=16% Similarity=0.195 Sum_probs=52.1
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCcc-EEEEcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~D-VVIDfT 114 (163)
..+.|+|++|.+|+.+++.+. ..|.++++...+ ..+.+...+. .+.+.+.. ...++. +..|.|
T Consensus 6 k~vlVTGas~GIG~aia~~L~-~~G~~V~~~~r~-~~~r~~~~~~------------~l~~~~~~--~~~~~~~~~~Dvt 69 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALA-GAGHRVYASMRD-IVGRNASNVE------------AIAGFARD--NDVDLRTLELDVQ 69 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESC-TTTTTHHHHH------------HHHHHHHH--HTCCEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEecCc-ccccCHHHHH------------HHHHHHHh--cCCcEEEEEeecC
Confidence 468999999999999999998 468998876542 2222211110 11111110 001222 245777
Q ss_pred CchhHHHHHHHHHHc--CCcEEEeCCC
Q 031216 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (163)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigttg 139 (163)
.++...+.+....+. ++.+|+-..|
T Consensus 70 d~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 70 SQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 777777666655544 6888876655
No 456
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=94.35 E-value=0.081 Score=41.77 Aligned_cols=31 Identities=32% Similarity=0.365 Sum_probs=26.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~ 39 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVD-EGSKVIDLS 39 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEe
Confidence 5799999999999999999985 588877543
No 457
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.34 E-value=0.096 Score=40.43 Aligned_cols=35 Identities=20% Similarity=0.154 Sum_probs=28.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
++.+|.|+|++|.+|+.+++.+.+..+.+++.+..
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR 37 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeC
Confidence 34679999999999999999998646788776543
No 458
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=94.29 E-value=0.16 Score=45.00 Aligned_cols=114 Identities=10% Similarity=0.074 Sum_probs=70.5
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhccCCC-------CCCcceeCCHHHHHh
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQ-------PLEIPVMSDLTMVLG 99 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-----~~g~~~~~l~g~~~-------~~gi~v~~~l~ell~ 99 (163)
+-+..||+|-| .|++|+..++.+. ..+.+++++.|+. +.|.|..++..... -.+...+.+ +++.
T Consensus 241 ~l~g~tVaVQG-~GNVG~~aa~~L~-e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~--~il~ 316 (501)
T 3mw9_A 241 GFGDKTFVVQG-FGNVGLHSMRYLH-RFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG--SILE 316 (501)
T ss_dssp SSTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS--CGGG
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc--cccc
Confidence 34568999999 7999999999887 4699999999952 45655544432110 011222222 4565
Q ss_pred cccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEeCC--CCCHHHHHHHHHHhhhcCeEEcC
Q 031216 100 SISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMVSTG 161 (163)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigtt--g~~~e~~~~L~~~A~~~~Vv~tg 161 (163)
.++|+++=+...... .+++. +-+..+|+|-. ..+++..+.| ++.||++.+
T Consensus 317 -----~~~DIliPcA~~n~I~~~na~---~l~akiV~EgAN~p~T~eA~~iL----~~rGIl~~P 369 (501)
T 3mw9_A 317 -----VDCDILIPAASEKQLTKSNAP---RVKAKIIAEGANGPTTPEADKIF----LERNIMVIP 369 (501)
T ss_dssp -----SCCSEEEECSSSCCBCTTTGG---GCCCSEEECCSSSCBCHHHHHHH----HHTTCEEEC
T ss_pred -----ccceEEeeccccCccCHhHHH---HcCceEEEeCCCCcCCHHHHHHH----HHCCCEEEC
Confidence 599999976644333 23333 23688888776 2455543333 456777753
No 459
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=94.29 E-value=0.3 Score=38.31 Aligned_cols=30 Identities=20% Similarity=0.356 Sum_probs=25.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
.++.|+|++|.+|+.+++.+.+ .|.+++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~ 37 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVA-EGAKVVFG 37 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE
Confidence 5799999999999999999985 58887754
No 460
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=94.29 E-value=0.66 Score=35.87 Aligned_cols=32 Identities=31% Similarity=0.401 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.. ++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~-~r 39 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAV-EGADIAIA-DL 39 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ES
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEEE-cC
Confidence 4699999999999999999985 58887754 44
No 461
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.28 E-value=0.14 Score=42.42 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=43.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhcc-CCCCCCcceeCCHHHHHhcccccCCc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKAR 107 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~~---g--~~~~~l~g-~~~~~gi~v~~~l~ell~~~~~~~~~ 107 (163)
++||+|+|+ |.||..++..+... ++ + +.++|.... | .++..... ......+..++|+ +++ .++
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~-g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al------~~a 73 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQK-NLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDL------AGA 73 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT-TCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGG------TTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHh------CCC
Confidence 479999996 99999998888754 55 7 778885421 1 11111100 0012234445788 555 389
Q ss_pred cEEEEcc
Q 031216 108 AVVIDFT 114 (163)
Q Consensus 108 DVVIDfT 114 (163)
|+||...
T Consensus 74 D~Vi~a~ 80 (322)
T 1t2d_A 74 DVVIVTA 80 (322)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999653
No 462
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=94.25 E-value=0.073 Score=42.57 Aligned_cols=46 Identities=15% Similarity=0.181 Sum_probs=26.6
Q ss_pred ceeeeccCCCCC----CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 22 KRFISCSTNPPQ----SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 22 ~~~~~~~~~~~~----~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|++-.+.. ...++.|+|++|.+|+.+++.+.+ .|.+++. +++
T Consensus 16 ~~l~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r 65 (281)
T 4dry_A 16 ENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSA-EGYSVVI-TGR 65 (281)
T ss_dssp ------------------CEEEETTTTSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred ceEEEeccccccCCCCCCCEEEEeCCCCHHHHHHHHHHHH-CCCEEEE-EEC
Confidence 355665543222 235799999999999999999984 6888775 454
No 463
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=94.22 E-value=0.31 Score=37.97 Aligned_cols=32 Identities=9% Similarity=0.214 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+ ++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~-~r 39 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELAR-NGARLLLF-SR 39 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ES
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEEE-eC
Confidence 4799999999999999999985 58887754 44
No 464
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.21 E-value=0.048 Score=48.07 Aligned_cols=90 Identities=12% Similarity=0.027 Sum_probs=54.6
Q ss_pred CCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCcc
Q 031216 29 TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA 108 (163)
Q Consensus 29 ~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~D 108 (163)
.+..-...+|+|+| .|+||+.+++.+... |+++. ++|+.. .+..+.. ..++. +.++++++. ..|
T Consensus 251 ~~~~l~GktVgIIG-~G~IG~~vA~~l~~~-G~~Vi-v~d~~~--~~~~~a~----~~g~~-~~~l~ell~------~aD 314 (479)
T 1v8b_A 251 TDFLISGKIVVICG-YGDVGKGCASSMKGL-GARVY-ITEIDP--ICAIQAV----MEGFN-VVTLDEIVD------KGD 314 (479)
T ss_dssp HCCCCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEE-EECSCH--HHHHHHH----TTTCE-ECCHHHHTT------TCS
T ss_pred cccccCCCEEEEEe-eCHHHHHHHHHHHhC-cCEEE-EEeCCh--hhHHHHH----HcCCE-ecCHHHHHh------cCC
Confidence 34445567999999 799999999998865 78876 466532 1111111 22333 358999885 899
Q ss_pred EEEEccC-chhHHHHHHHHHHcCCcEE
Q 031216 109 VVIDFTD-ASTVYDNVKQATAFGMRSV 134 (163)
Q Consensus 109 VVIDfT~-p~~~~~~~~~al~~G~~vV 134 (163)
+|+-.+. +..........++.|.-+|
T Consensus 315 iVi~~~~t~~lI~~~~l~~MK~gaili 341 (479)
T 1v8b_A 315 FFITCTGNVDVIKLEHLLKMKNNAVVG 341 (479)
T ss_dssp EEEECCSSSSSBCHHHHTTCCTTCEEE
T ss_pred EEEECCChhhhcCHHHHhhcCCCcEEE
Confidence 9997752 2222222223345555444
No 465
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=94.20 E-value=0.14 Score=40.67 Aligned_cols=32 Identities=22% Similarity=0.266 Sum_probs=26.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r 54 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGK-EGLRVFV-CAR 54 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EeC
Confidence 5799999999999999999985 5888775 444
No 466
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=94.20 E-value=0.6 Score=37.08 Aligned_cols=88 Identities=22% Similarity=0.217 Sum_probs=51.3
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCcc---EEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVID 112 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~D---VVID 112 (163)
.++.|+|++|.+|+.+++.+. ..+.+++.+..+..... ++ ...++++..++. ....+ +..|
T Consensus 10 k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~---~~-----------~~~~~~~~~~~~-~~~~~~~~~~~D 73 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVA-ADGANVALVAKSAEPHP---KL-----------PGTIYTAAKEIE-EAGGQALPIVGD 73 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-TTTCEEEEEESCCSCCS---SS-----------CCCHHHHHHHHH-HHTSEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECChhhhh---hh-----------hHHHHHHHHHHH-hcCCcEEEEECC
Confidence 579999999999999999998 45888775443321111 10 011222111100 01222 2347
Q ss_pred ccCchhHHHHHHHHHHc--CCcEEEeCCC
Q 031216 113 FTDASTVYDNVKQATAF--GMRSVVYVPH 139 (163)
Q Consensus 113 fT~p~~~~~~~~~al~~--G~~vVigttg 139 (163)
.+.++...+.+....+. ++.+++-..|
T Consensus 74 v~~~~~v~~~~~~~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 74 IRDGDAVAAAVAKTVEQFGGIDICVNNAS 102 (285)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 78888777776666554 7888876654
No 467
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.20 E-value=0.44 Score=36.88 Aligned_cols=30 Identities=33% Similarity=0.521 Sum_probs=25.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~-~G~~V~~~ 35 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAK-EGARLVAC 35 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEE
Confidence 5799999999999999999874 68887754
No 468
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=94.19 E-value=0.37 Score=36.88 Aligned_cols=31 Identities=26% Similarity=0.332 Sum_probs=26.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvi 67 (163)
.+|.|+|++|.+|+.+++.+.+ .+.+++.+.
T Consensus 8 k~vlVTGasggiG~~~a~~l~~-~G~~V~~~~ 38 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFAR-AGAKVGLHG 38 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHH-CCCEEEEEC
Confidence 5799999999999999999985 588877543
No 469
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=94.19 E-value=0.21 Score=39.51 Aligned_cols=84 Identities=15% Similarity=0.120 Sum_probs=48.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCcc-EEEEcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~D-VVIDfT 114 (163)
.++.|+|++|.+|+.+++.+. ..+.+++.+ ++.. .+..+.. ..+.+... .++. +..|.+
T Consensus 28 k~~lVTGas~GIG~aia~~l~-~~G~~V~~~-~r~~--~~~~~~~-----------~~~~~~~~-----~~~~~~~~Dv~ 87 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFM-RHGCHTVIA-SRSL--PRVLTAA-----------RKLAGATG-----RRCLPLSMDVR 87 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-TTTCEEEEE-ESCH--HHHHHHH-----------HHHHHHHS-----SCEEEEECCTT
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEE-eCCH--HHHHHHH-----------HHHHHhcC-----CcEEEEEcCCC
Confidence 579999999999999999998 568888754 4321 1111110 01111110 1222 234677
Q ss_pred CchhHHHHHHHHHHc--CCcEEEeCCC
Q 031216 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (163)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigttg 139 (163)
.++...+.+..+.+. ++.+++-..|
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 88 APPAVMAAVDQALKEFGRIDILINCAA 114 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 777766666555544 6777775554
No 470
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=94.17 E-value=0.23 Score=38.58 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=27.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCC--cEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARG--MEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~--~eLvgvid 68 (163)
+.+|.|+|++|.+|+.+++.+.+... .+++.+..
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r 56 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR 56 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEec
Confidence 46899999999999999999985432 78776543
No 471
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=94.15 E-value=0.049 Score=44.67 Aligned_cols=71 Identities=13% Similarity=0.163 Sum_probs=43.9
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-------EEEEEEecCC-----CCcchhhhccC--CCCCCcceeCCHHHHHhc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-------EVAGAIDSHS-----VGEDIGMVCDM--EQPLEIPVMSDLTMVLGS 100 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-------eLvgvid~~~-----~g~~~~~l~g~--~~~~gi~v~~~l~ell~~ 100 (163)
++||.|+|++|.+|+.++..+.. .+. +++. +|+.. .|. ..++... .-..++...+++.+++.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~-~g~~~~~~~~ev~l-~D~~~~~~~~~g~-~~dl~~~~~~~~~di~~~~~~~~a~~- 79 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAA-GEMLGKDQPVILQL-LEIPQAMKALEGV-VMELEDCAFPLLAGLEATDDPKVAFK- 79 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHT-TTTTCTTCCEEEEE-ECCGGGHHHHHHH-HHHHHTTTCTTEEEEEEESCHHHHTT-
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-CCCCCCCCCCEEEE-EeCCCchhhccch-hhhhhcccccccCCeEeccChHHHhC-
Confidence 47999999999999999999876 443 6664 67531 110 1112110 00012334467777774
Q ss_pred ccccCCccEEEEcc
Q 031216 101 ISQSKARAVVIDFT 114 (163)
Q Consensus 101 ~~~~~~~DVVIDfT 114 (163)
++|+||.+.
T Consensus 80 -----~~D~Vih~A 88 (327)
T 1y7t_A 80 -----DADYALLVG 88 (327)
T ss_dssp -----TCSEEEECC
T ss_pred -----CCCEEEECC
Confidence 899999864
No 472
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.14 E-value=0.045 Score=47.75 Aligned_cols=88 Identities=17% Similarity=0.179 Sum_probs=53.4
Q ss_pred cCCCCCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCc
Q 031216 28 STNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR 107 (163)
Q Consensus 28 ~~~~~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~ 107 (163)
+++..-.-.+|+|+| +|.+|+.+++.+.. -|+++. ++|++.. ...+.. ..+.. +.++++++. ..
T Consensus 213 at~~~L~GktV~ViG-~G~IGk~vA~~Lra-~Ga~Vi-v~D~dp~--ra~~A~----~~G~~-v~~Leeal~------~A 276 (435)
T 3gvp_A 213 TTDMMFGGKQVVVCG-YGEVGKGCCAALKA-MGSIVY-VTEIDPI--CALQAC----MDGFR-LVKLNEVIR------QV 276 (435)
T ss_dssp HHCCCCTTCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSCHH--HHHHHH----HTTCE-ECCHHHHTT------TC
T ss_pred hhCceecCCEEEEEe-eCHHHHHHHHHHHH-CCCEEE-EEeCChh--hhHHHH----HcCCE-eccHHHHHh------cC
Confidence 344444457999999 69999999999874 588865 4664321 111100 12322 358999885 89
Q ss_pred cEEEEccC-chhHHHHHHHHHHcCC
Q 031216 108 AVVIDFTD-ASTVYDNVKQATAFGM 131 (163)
Q Consensus 108 DVVIDfT~-p~~~~~~~~~al~~G~ 131 (163)
|+|+.++- +..........++.|.
T Consensus 277 DIVi~atgt~~lI~~e~l~~MK~ga 301 (435)
T 3gvp_A 277 DIVITCTGNKNVVTREHLDRMKNSC 301 (435)
T ss_dssp SEEEECSSCSCSBCHHHHHHSCTTE
T ss_pred CEEEECCCCcccCCHHHHHhcCCCc
Confidence 99998652 3333333344455554
No 473
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.14 E-value=0.33 Score=38.53 Aligned_cols=32 Identities=31% Similarity=0.477 Sum_probs=26.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.. ++
T Consensus 33 k~~lVTGas~GIG~aia~~la~-~G~~V~~~-~r 64 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAE-AGAQVAVA-AR 64 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEE-ES
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE-eC
Confidence 5799999999999999999985 58887754 44
No 474
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.14 E-value=0.13 Score=39.77 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 10 k~vlITGas~giG~~~a~~l~~-~G~~V~~-~~r 41 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAR-EGAAVVV-ADI 41 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEE-EcC
Confidence 5799999999999999999984 5888765 454
No 475
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.14 E-value=0.12 Score=42.50 Aligned_cols=68 Identities=22% Similarity=0.137 Sum_probs=42.0
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
|.||+|+| .|..|++++..+. .-|++++.+ |+... .....++.. ..-++.+++.+.++.. .+++|+|+
T Consensus 1 MK~I~ilG-gg~~g~~~~~~Ak-~~G~~vv~v-d~~~~-~~~~~~aD~--~~~~~~~~d~~~~~~~---~~~~D~v~ 68 (363)
T 4ffl_A 1 MKTICLVG-GKLQGFEAAYLSK-KAGMKVVLV-DKNPQ-ALIRNYADE--FYCFDVIKEPEKLLEL---SKRVDAVL 68 (363)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEE-ESCTT-CTTTTTSSE--EEECCTTTCHHHHHHH---HTSSSEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEE-eCCCC-ChhHhhCCE--EEECCCCcCHHHHHHH---hcCCCEEE
Confidence 67999999 5999999998876 569999865 64321 111122110 1123334566665432 26899877
No 476
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.14 E-value=0.094 Score=44.22 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=26.9
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~ 70 (163)
...||+|+| .|.+|+.+++.+.. -+++ |-++|+.
T Consensus 171 ~g~~V~ViG-aG~iG~~aa~~a~~-~Ga~-V~~~d~~ 204 (384)
T 1l7d_A 171 PPARVLVFG-VGVAGLQAIATAKR-LGAV-VMATDVR 204 (384)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHH-TTCE-EEEECSC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCE-EEEEeCC
Confidence 457999999 59999999998874 5677 5567854
No 477
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=94.13 E-value=0.56 Score=37.72 Aligned_cols=32 Identities=31% Similarity=0.476 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .|.+++.+ ++
T Consensus 42 k~vlVTGas~GIG~aia~~la~-~G~~V~~~-~r 73 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFAR-AGANVAVA-AR 73 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEE-ES
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEEE-EC
Confidence 4799999999999999999984 68887754 54
No 478
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.10 E-value=0.3 Score=39.81 Aligned_cols=68 Identities=21% Similarity=0.203 Sum_probs=42.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhh---hccCCCCCCcceeCCHHHHHhcccccC
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGM---VCDMEQPLEIPVMSDLTMVLGSISQSK 105 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~~---g--~~~~~---l~g~~~~~gi~v~~~l~ell~~~~~~~ 105 (163)
++||+|+|+ |.||..++..+... ++ + +.++|+... + .+... ..+. ...+..++++ +.+ .
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~-g~~~-V~l~D~~~~~~~~~~~~l~~~~~~~~~--~~~i~~t~d~-~a~------~ 71 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKD-NLAD-VVLFDIAEGIPQGKALDITHSMVMFGS--TSKVIGTDDY-ADI------S 71 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHH-TCCE-EEEECSSSSHHHHHHHHHHHHHHHHTC--CCCEEEESCG-GGG------T
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCce-EEEEeCCchHHHHHHHHHHhhhhhcCC--CcEEEECCCH-HHh------C
Confidence 479999995 99999999988754 55 7 557785431 1 01100 0100 2234455777 455 3
Q ss_pred CccEEEEcc
Q 031216 106 ARAVVIDFT 114 (163)
Q Consensus 106 ~~DVVIDfT 114 (163)
++|+||...
T Consensus 72 ~aDiVi~av 80 (317)
T 2ewd_A 72 GSDVVIITA 80 (317)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEeC
Confidence 899999654
No 479
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=94.09 E-value=0.29 Score=38.64 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=26.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~-~G~~V~~-~~r 43 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLAR-AGARVVL-ADL 43 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EEC
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EcC
Confidence 5799999999999999999984 6888764 454
No 480
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.08 E-value=0.15 Score=41.40 Aligned_cols=98 Identities=15% Similarity=0.125 Sum_probs=53.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCccee--CCHHHHHhcccccCCccEEEEc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVVIDF 113 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~--~~l~ell~~~~~~~~~DVVIDf 113 (163)
-+|.|.|+ |.+|...++.+. .-+...+.++++...-.+...-+|. ..+.-+ .+..+....+.....+|+|+|+
T Consensus 162 ~~VlV~Ga-G~vG~~aiq~ak-~~G~~~vi~~~~~~~k~~~a~~lGa---~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~ 236 (346)
T 4a2c_A 162 KNVIIIGA-GTIGLLAIQCAV-ALGAKSVTAIDISSEKLALAKSFGA---MQTFNSSEMSAPQMQSVLRELRFNQLILET 236 (346)
T ss_dssp SEEEEECC-SHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHGGGCSSEEEEEC
T ss_pred CEEEEECC-CCcchHHHHHHH-HcCCcEEEEEechHHHHHHHHHcCC---eEEEeCCCCCHHHHHHhhcccCCccccccc
Confidence 57999996 999998887765 5677666666743211122222221 111112 2334433322224578999999
Q ss_pred cCchhHHHHHHHHHHcCCc-EEEeCC
Q 031216 114 TDASTVYDNVKQATAFGMR-SVVYVP 138 (163)
Q Consensus 114 T~p~~~~~~~~~al~~G~~-vVigtt 138 (163)
+-.....+.+..+++.|-. +++|..
T Consensus 237 ~G~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 237 AGVPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp SCSHHHHHHHHHHCCTTCEEEECCCC
T ss_pred ccccchhhhhhheecCCeEEEEEecc
Confidence 8644455555555555444 444544
No 481
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.07 E-value=0.16 Score=39.38 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=28.4
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
...+|.|+|++|.+|+.+++.+.+ .+.+++.+.++
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~-~G~~v~~~~~~ 46 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHK-DGFRVVAGCGP 46 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHH-TTEEEEEEECT
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCC
Confidence 347899999999999999999984 58888765543
No 482
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.05 E-value=0.064 Score=44.84 Aligned_cols=71 Identities=18% Similarity=0.150 Sum_probs=42.3
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCC---CC--cchhhhccCCCCCCcceeCCHHHHHhcccccCCc
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHS---VG--EDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR 107 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~---~g--~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~ 107 (163)
.+.||+|+|+ |.||..++..+...+-+ +|+ ++|... .| .|+.+.... ..++.++.+..+.+ .++
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~-l~D~~~~k~~g~a~DL~~~~~~--~~~~~i~~~~~~a~------~~a 77 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIG-IVDIFKDKTKGDAIDLEDALPF--TSPKKIYSAEYSDA------KDA 77 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSCHHHHHHHHHHHHTTGGG--SCCCEEEECCGGGG------TTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEE-EEeCChHHHHHHHhhHhhhhhh--cCCcEEEECcHHHh------cCC
Confidence 3579999995 99999999988765544 554 678531 11 122221111 12344554444445 489
Q ss_pred cEEEEcc
Q 031216 108 AVVIDFT 114 (163)
Q Consensus 108 DVVIDfT 114 (163)
|+||...
T Consensus 78 DiVvi~a 84 (326)
T 3vku_A 78 DLVVITA 84 (326)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9988653
No 483
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=94.04 E-value=0.46 Score=36.94 Aligned_cols=32 Identities=44% Similarity=0.472 Sum_probs=26.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+ ++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~-~r 44 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDK-AGATVAIA-DL 44 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ES
T ss_pred CEEEEeCCCChHHHHHHHHHHH-CCCEEEEE-eC
Confidence 5799999999999999999985 67887754 44
No 484
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=94.03 E-value=0.32 Score=44.32 Aligned_cols=91 Identities=12% Similarity=0.180 Sum_probs=56.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCC-----C-------cchh--------hhc-cCCCCCCcce--e-
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV-----G-------EDIG--------MVC-DMEQPLEIPV--M- 91 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~-----g-------~~~~--------~l~-g~~~~~gi~v--~- 91 (163)
.||+|+| .|.+|..+++.+. ..|+.=+.++|.+.. + .+++ +.+ .+ ..++.+ +
T Consensus 18 s~VlVVG-aGGLGsevak~La-~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~i--NP~v~V~a~~ 93 (640)
T 1y8q_B 18 GRVLVVG-AGGIGCELLKNLV-LTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQF--YPKANIVAYH 93 (640)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-HHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTT--CTTCEEEEEE
T ss_pred CeEEEEC-cCHHHHHHHHHHH-HcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHH--CCCCeEEEEe
Confidence 6899999 5999999999988 567866778884311 0 1111 000 11 112222 1
Q ss_pred CCH------HHHHhcccccCCccEEEEccCchhH-HHHHHHHHHcCCcEEEe
Q 031216 92 SDL------TMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVY 136 (163)
Q Consensus 92 ~~l------~ell~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVig 136 (163)
..+ ++.+ ..+|+|||++..-.. ...-..|.++++|+|.+
T Consensus 94 ~~i~~~~~~~~~~------~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~ 139 (640)
T 1y8q_B 94 DSIMNPDYNVEFF------RQFILVMNALDNRAARNHVNRMCLAADVPLIES 139 (640)
T ss_dssp SCTTSTTSCHHHH------TTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred cccchhhhhHhhh------cCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 222 3444 389999998844444 45557889999999854
No 485
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.03 E-value=0.14 Score=42.35 Aligned_cols=70 Identities=21% Similarity=0.239 Sum_probs=41.8
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhc-CCcEEEEEEecCC--CCcchhhhccCCCCCCccee----CCHHHHHhcccccCCcc
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSKARA 108 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~-~~~eLvgvid~~~--~g~~~~~l~g~~~~~gi~v~----~~l~ell~~~~~~~~~D 108 (163)
+||+|+||+|.+|..++..+... +-..=+.++|... .|+ +-++... +....+. ++..+.+ .++|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~-a~Dl~~~--~~~~~v~~~~~~~~~~~~------~~aD 71 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGV-AVDLSHI--PTAVKIKGFSGEDATPAL------EGAD 71 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHH-HHHHHTS--CSSEEEEEECSSCCHHHH------TTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhH-HHHhhCC--CCCceEEEecCCCcHHHh------CCCC
Confidence 58999998899999999888765 3333344778543 121 1222221 2233332 2445555 3899
Q ss_pred EEEEcc
Q 031216 109 VVIDFT 114 (163)
Q Consensus 109 VVIDfT 114 (163)
+||...
T Consensus 72 ivii~a 77 (312)
T 3hhp_A 72 VVLISA 77 (312)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 988543
No 486
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=94.00 E-value=0.22 Score=38.62 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=26.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 10 k~vlITGas~gIG~~~a~~l~~-~G~~V~~-~~r 41 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAK-GGAKVVI-VDR 41 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EES
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEE-EcC
Confidence 5799999999999999999984 5888775 454
No 487
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.00 E-value=0.072 Score=44.30 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=53.6
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhccCCCCCCccee----CCHHHHHhcccccCCccEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSKARAVV 110 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~~g~~~~~l~g~~~~~gi~v~----~~l~ell~~~~~~~~~DVV 110 (163)
-+|+|+|+ |.+|...++.+. .-+. ++++ +++...-.+...-+|.. .+.-+ .++.+.+.++..+ .+|+|
T Consensus 195 ~~VlV~Ga-G~vG~~a~q~a~-~~Ga~~Vi~-~~~~~~~~~~a~~lGa~---~vi~~~~~~~~~~~~i~~~~~g-g~D~v 267 (378)
T 3uko_A 195 SNVAIFGL-GTVGLAVAEGAK-TAGASRIIG-IDIDSKKYETAKKFGVN---EFVNPKDHDKPIQEVIVDLTDG-GVDYS 267 (378)
T ss_dssp CCEEEECC-SHHHHHHHHHHH-HHTCSCEEE-ECSCTTHHHHHHTTTCC---EEECGGGCSSCHHHHHHHHTTS-CBSEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-HcCCCeEEE-EcCCHHHHHHHHHcCCc---EEEccccCchhHHHHHHHhcCC-CCCEE
Confidence 47999997 999999888776 5577 5665 45322111222212210 11111 2344433322112 79999
Q ss_pred EEccCchhHHHHHHHHHHc--CCcEEEeCC
Q 031216 111 IDFTDASTVYDNVKQATAF--GMRSVVYVP 138 (163)
Q Consensus 111 IDfT~p~~~~~~~~~al~~--G~~vVigtt 138 (163)
||++-.....+.+..+++. |.-+++|.+
T Consensus 268 id~~g~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 268 FECIGNVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp EECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred EECCCCHHHHHHHHHHhhccCCEEEEEccc
Confidence 9998665555666566664 565666653
No 488
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.00 E-value=0.072 Score=47.03 Aligned_cols=87 Identities=14% Similarity=0.116 Sum_probs=53.2
Q ss_pred CCCCeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCccEEE
Q 031216 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (163)
Q Consensus 32 ~~~~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~DVVI 111 (163)
...-.+|+|+| .|.||+.+++.+.. -+++++ ++|+.. .+..... ..|+. +.++++++. .+|+||
T Consensus 271 ~l~GktV~IiG-~G~IG~~~A~~lka-~Ga~Vi-v~d~~~--~~~~~A~----~~Ga~-~~~l~e~l~------~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICG-YGDVGKGCAEAMKG-QGARVS-VTEIDP--INALQAM----MEGFD-VVTVEEAIG------DADIVV 334 (494)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----HTTCE-ECCHHHHGG------GCSEEE
T ss_pred CCCcCEEEEEc-cCHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HcCCE-EecHHHHHh------CCCEEE
Confidence 34457899999 69999999999874 578765 566532 1111111 22333 347888764 899999
Q ss_pred EccCchh-HHHHHHHHHHcCCcEE
Q 031216 112 DFTDAST-VYDNVKQATAFGMRSV 134 (163)
Q Consensus 112 DfT~p~~-~~~~~~~al~~G~~vV 134 (163)
+++.... ........++.|--++
T Consensus 335 ~atgt~~~i~~~~l~~mk~ggilv 358 (494)
T 3ce6_A 335 TATGNKDIIMLEHIKAMKDHAILG 358 (494)
T ss_dssp ECSSSSCSBCHHHHHHSCTTCEEE
T ss_pred ECCCCHHHHHHHHHHhcCCCcEEE
Confidence 8874333 3323444556665544
No 489
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=93.95 E-value=0.33 Score=37.96 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=27.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|.|+|++|.+|+.+++.+.+ .+.+++...++
T Consensus 27 k~vlVTGas~gIG~~la~~l~~-~G~~v~i~~~r 59 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAA-DGFNIGVHYHR 59 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCC
Confidence 4799999999999999999874 68888765554
No 490
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.95 E-value=0.25 Score=37.52 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=26.4
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCC--cEEEEEEe
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARG--MEVAGAID 68 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~--~eLvgvid 68 (163)
.+|.|+|++|.+|+.+++.+.+ .+ .+++.+..
T Consensus 4 k~vlItGasggiG~~la~~l~~-~g~~~~V~~~~r 37 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVK-DKNIRHIIATAR 37 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHT-CTTCCEEEEEES
T ss_pred CEEEEecCCchHHHHHHHHHHh-cCCCcEEEEEec
Confidence 5799999999999999999985 45 78776543
No 491
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.94 E-value=0.2 Score=41.48 Aligned_cols=70 Identities=21% Similarity=0.257 Sum_probs=43.1
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhcc-CCCCCCcceeCCHHHHHhcccccCCc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKAR 107 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~~~---g--~~~~~l~g-~~~~~gi~v~~~l~ell~~~~~~~~~ 107 (163)
++||+|+|+ |.||..++..+.. .++ + +.++|.... + .+...... ......+..++|+ +++ .++
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~-~g~~~-V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al------~~a 83 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQ-KDLGD-VYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYL------QNS 83 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCCE-EEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGG------TTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCCe-EEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHH------CCC
Confidence 369999996 9999999988774 466 7 667885421 1 11111110 0002235555788 555 389
Q ss_pred cEEEEcc
Q 031216 108 AVVIDFT 114 (163)
Q Consensus 108 DVVIDfT 114 (163)
|+||...
T Consensus 84 D~VI~av 90 (328)
T 2hjr_A 84 DVVIITA 90 (328)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9999654
No 492
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.94 E-value=0.87 Score=35.82 Aligned_cols=93 Identities=19% Similarity=0.275 Sum_probs=51.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecC-CCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCcc---EEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVI 111 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~-~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~D---VVI 111 (163)
.++.|+|++|.+|+.+++.+. ..+.+++.+ ++. ...... .+.. .. ...++++...+. ..... +..
T Consensus 16 k~~lVTGas~gIG~a~a~~la-~~G~~V~~~-~r~~~~~~~~-~~~~----~~---~~~~~~~~~~~~-~~~~~~~~~~~ 84 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLA-AEGADIIAC-DICAPVSASV-TYAP----AS---PEDLDETARLVE-DQGRKALTRVL 84 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEE-ECCSCCCTTC-CSCC----CC---HHHHHHHHHHHH-TTTCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEE-eccccccccc-cccc----cC---HHHHHHHHHHHH-hcCCeEEEEEc
Confidence 569999999999999999998 468888754 432 110000 0000 00 011122111100 01222 235
Q ss_pred EccCchhHHHHHHHHHHc--CCcEEEeCCC
Q 031216 112 DFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (163)
Q Consensus 112 DfT~p~~~~~~~~~al~~--G~~vVigttg 139 (163)
|.+.++...+.+..+.+. ++.+++-..|
T Consensus 85 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 85 DVRDDAALRELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp CTTCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 778888777776665554 6888876654
No 493
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=93.92 E-value=0.34 Score=37.09 Aligned_cols=30 Identities=27% Similarity=0.287 Sum_probs=25.9
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+
T Consensus 7 k~vlVtGasggiG~~~a~~l~~-~G~~V~~~ 36 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVE-EGAKVMIT 36 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred cEEEEeCCCChHHHHHHHHHHH-CCCEEEEE
Confidence 5799999999999999999985 58887754
No 494
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=93.91 E-value=0.28 Score=38.20 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=26.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.. ++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~-~r 39 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAK-EGAHIVLV-AR 39 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-TTCEEEEE-ES
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEEE-cC
Confidence 4699999999999999999985 57887754 44
No 495
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=93.89 E-value=0.34 Score=37.07 Aligned_cols=30 Identities=30% Similarity=0.282 Sum_probs=25.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEE
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgv 66 (163)
.++.|+|++|.+|+.+++.+.+ .+.+++.+
T Consensus 3 k~vlItGasggiG~~~a~~l~~-~G~~V~~~ 32 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLA-RGDRVAAL 32 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEE
Confidence 4689999999999999999985 57887754
No 496
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=93.89 E-value=0.23 Score=39.16 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=51.3
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhccCCCCCCcceeCCHHHHHhcccccCCcc-EEEEc
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~~~~g~~~~~l~g~~~~~gi~v~~~l~ell~~~~~~~~~D-VVIDf 113 (163)
..+|.|+|++|.+|+.+++.+.+ .|.+++.+..+.. +..+. .+++... ...++. +..|.
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~-~G~~V~~~~r~~~---~~~~~--------------~~~l~~~--~~~~~~~~~~Dl 71 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSS-NGIMVVLTCRDVT---KGHEA--------------VEKLKNS--NHENVVFHQLDV 71 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHH-TTCEEEEEESCHH---HHHHH--------------HHHHHTT--TCCSEEEEECCT
T ss_pred CcEEEEecCCchHHHHHHHHHHH-CCCEEEEEeCCHH---HHHHH--------------HHHHHhc--CCCceEEEEccC
Confidence 35799999999999999999985 5888775443211 11110 1111110 001222 23578
Q ss_pred cCc-hhHHHHHHHHHHc--CCcEEEeCCCC
Q 031216 114 TDA-STVYDNVKQATAF--GMRSVVYVPHI 140 (163)
Q Consensus 114 T~p-~~~~~~~~~al~~--G~~vVigttg~ 140 (163)
+.+ +.....+....+. ++.+|+-..|.
T Consensus 72 ~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 72 TDPIATMSSLADFIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred CCcHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 888 6666665555444 78999877764
No 497
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=93.88 E-value=0.58 Score=37.27 Aligned_cols=32 Identities=28% Similarity=0.361 Sum_probs=26.7
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.+|.|.|+++++|+.+++.+. ..|.+++. +|+
T Consensus 3 K~vlVTGas~GIG~aia~~la-~~Ga~V~~-~~~ 34 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFL-EAGDKVCF-IDI 34 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEE-EES
T ss_pred CEEEEecCCCHHHHHHHHHHH-HCCCEEEE-EeC
Confidence 468999999999999999998 57888764 564
No 498
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.87 E-value=0.075 Score=43.74 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=25.8
Q ss_pred CCeeEEEEcCCCHHHHHHHHHHHhcCCc-EEEEEEecC
Q 031216 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (163)
Q Consensus 34 ~~irV~VvGa~G~mG~~i~~~i~~~~~~-eLvgvid~~ 70 (163)
.++||+|+|+ |.||..++..+....-. +|+ ++|..
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~-l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIV-LIDAN 40 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEE-EEeCC
Confidence 4579999996 99999999887654322 555 57853
No 499
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=93.84 E-value=0.16 Score=39.93 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=27.3
Q ss_pred CeeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEe
Q 031216 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (163)
Q Consensus 35 ~irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid 68 (163)
+.++.|+|++|.+|+.+++.+.+ .|.+++....
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~-~G~~V~~~~r 37 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVA-AGDTVIGTAR 37 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CcEEEEECCCChHHHHHHHHHHH-CCCEEEEEeC
Confidence 45799999999999999999884 6888876543
No 500
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.83 E-value=0.45 Score=37.30 Aligned_cols=32 Identities=28% Similarity=0.416 Sum_probs=26.5
Q ss_pred eeEEEEcCCCHHHHHHHHHHHhcCCcEEEEEEec
Q 031216 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (163)
Q Consensus 36 irV~VvGa~G~mG~~i~~~i~~~~~~eLvgvid~ 69 (163)
.++.|+|++|.+|+.+++.+. ..+.+++. +++
T Consensus 11 k~vlVTGas~gIG~aia~~l~-~~G~~V~~-~~r 42 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFA-RAGANVAV-AGR 42 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEE-EES
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEE-EeC
Confidence 579999999999999999987 46888775 454
Done!