Query 031218
Match_columns 163
No_of_seqs 228 out of 1464
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 17:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031218.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031218hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 8.2E-35 2.8E-39 213.4 10.3 150 1-163 1-151 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 2.6E-30 8.8E-35 191.3 13.1 105 54-162 56-161 (161)
3 3gla_A Low molecular weight he 100.0 5.4E-29 1.8E-33 170.4 14.0 97 52-149 2-98 (100)
4 4fei_A Heat shock protein-rela 99.9 1.6E-27 5.4E-32 163.8 11.8 93 51-149 3-95 (102)
5 3aab_A Putative uncharacterize 99.9 7.2E-27 2.5E-31 165.6 10.0 94 52-149 22-116 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 3.5E-25 1.2E-29 153.2 14.1 99 55-162 3-105 (106)
7 2wj5_A Heat shock protein beta 99.9 1.3E-24 4.5E-29 149.0 11.8 96 56-160 3-99 (101)
8 3q9p_A Heat shock protein beta 99.9 1.3E-23 4.6E-28 139.7 11.1 83 59-149 2-85 (85)
9 2klr_A Alpha-crystallin B chai 99.9 2.7E-23 9.2E-28 155.4 11.3 97 56-162 65-162 (175)
10 2y1y_A Alpha-crystallin B chai 99.9 1.8E-22 6.1E-27 135.6 12.5 85 61-154 3-88 (90)
11 2bol_A TSP36, small heat shock 99.9 5.7E-22 2E-26 160.1 10.0 88 53-149 97-189 (314)
12 2bol_A TSP36, small heat shock 99.8 1.6E-20 5.3E-25 151.7 11.3 90 55-149 221-314 (314)
13 1rl1_A Suppressor of G2 allele 99.1 2.6E-10 8.8E-15 78.9 8.6 81 53-149 8-88 (114)
14 2xcm_C SGT1-like protein, cyto 99.1 3E-10 1E-14 75.4 7.5 80 54-149 2-81 (92)
15 3eud_A Protein SHQ1; CS domain 98.5 1.2E-06 4.2E-11 60.1 10.3 78 51-149 14-96 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.5 2.2E-07 7.7E-12 65.8 6.8 75 54-149 3-82 (134)
17 3igf_A ALL4481 protein; two-do 98.3 1.8E-06 6.3E-11 71.1 9.1 73 54-149 297-370 (374)
18 1x5m_A Calcyclin-binding prote 98.1 4.9E-05 1.7E-09 53.2 10.4 80 54-149 20-103 (127)
19 1wgv_A KIAA1068 protein; CS do 98.0 0.00011 3.8E-09 51.1 11.5 81 53-149 18-101 (124)
20 1wh0_A Ubiquitin carboxyl-term 98.0 4E-05 1.4E-09 54.3 9.0 88 53-149 18-111 (134)
21 1ejf_A Progesterone receptor P 97.8 0.00017 5.8E-09 50.3 9.0 77 56-149 5-81 (125)
22 3qor_A Nuclear migration prote 97.7 0.00033 1.1E-08 48.5 9.7 81 50-149 12-96 (121)
23 1wfi_A Nuclear distribution ge 97.7 0.00027 9.3E-09 49.6 8.7 78 53-149 6-87 (131)
24 2rh0_A NUDC domain-containing 97.7 0.00059 2E-08 49.5 10.4 78 52-149 11-90 (157)
25 2o30_A Nuclear movement protei 97.6 0.00069 2.4E-08 47.5 9.9 76 54-149 4-80 (131)
26 2kmw_A Uncharacterized protein 97.5 0.00024 8.2E-09 51.2 6.9 77 54-149 4-81 (150)
27 2cg9_X CO-chaperone protein SB 97.4 8.5E-05 2.9E-09 52.5 3.4 84 54-149 6-97 (134)
28 3q9p_A Heat shock protein beta 83.0 2.8 9.7E-05 26.4 5.2 33 116-149 8-40 (85)
29 3gla_A Low molecular weight he 77.1 9.2 0.00031 24.4 6.4 33 116-149 15-47 (100)
30 4fei_A Heat shock protein-rela 77.0 11 0.00037 24.4 6.7 33 65-98 62-95 (102)
31 2y1y_A Alpha-crystallin B chai 76.3 4.8 0.00016 25.5 4.7 33 116-149 7-39 (90)
32 4eld_A MJ16.5-P1, small heat s 73.0 15 0.00053 25.7 7.2 32 117-149 68-99 (161)
33 3l1e_A Alpha-crystallin A chai 72.8 6.8 0.00023 25.7 4.9 32 116-148 13-44 (106)
34 2wj5_A Heat shock protein beta 72.7 6.2 0.00021 25.6 4.6 33 116-149 12-44 (101)
35 3aab_A Putative uncharacterize 68.8 11 0.00038 25.2 5.4 32 117-149 36-68 (123)
36 1gme_A Heat shock protein 16.9 61.8 17 0.00058 25.3 5.4 33 65-98 105-138 (151)
37 2nwt_A UPF0165 protein AF_2212 61.7 6.1 0.00021 24.3 2.6 16 130-145 3-18 (69)
38 2klr_A Alpha-crystallin B chai 55.2 15 0.00053 26.4 4.3 33 116-149 74-106 (175)
39 3qqz_A Putative uncharacterize 43.1 1E+02 0.0034 23.3 7.4 65 71-144 21-86 (255)
40 2cql_A OK/SW-CL.103, 60S ribos 42.9 38 0.0013 22.0 4.3 19 77-96 20-38 (100)
41 1nkw_E 50S ribosomal protein L 42.1 68 0.0023 23.9 6.1 45 77-147 39-83 (212)
42 3j21_F 50S ribosomal protein L 40.7 45 0.0015 24.2 4.8 45 77-146 14-58 (184)
43 1rl6_A Protein (ribosomal prot 40.4 59 0.002 23.4 5.4 45 77-147 11-55 (177)
44 1ew4_A CYAY protein; friedreic 37.8 18 0.00063 23.8 2.2 17 131-147 29-45 (106)
45 2o30_A Nuclear movement protei 36.8 51 0.0017 22.1 4.4 30 116-145 15-44 (131)
46 1vq8_E 50S ribosomal protein L 34.2 74 0.0025 23.0 5.1 47 77-148 9-55 (178)
47 3oeq_A Frataxin homolog, mitoc 32.5 34 0.0012 23.3 2.8 16 132-147 49-64 (123)
48 4awd_A Beta-porphyranase; hydr 30.6 1.1E+02 0.0036 24.2 5.9 48 76-126 85-145 (324)
49 3iln_A Laminarinase; jelly ROW 29.2 69 0.0023 24.0 4.4 47 77-126 46-97 (251)
50 2ks0_A Uncharacterized protein 29.2 37 0.0013 20.8 2.3 22 74-96 17-38 (71)
51 3v2d_H 50S ribosomal protein L 28.2 1.1E+02 0.0038 22.0 5.2 44 77-146 12-55 (180)
52 2hbp_A Cytoskeleton assembly c 27.8 40 0.0014 20.5 2.3 34 58-91 7-40 (68)
53 1wgv_A KIAA1068 protein; CS do 27.7 82 0.0028 20.8 4.2 31 116-146 30-61 (124)
54 3iz5_F 60S ribosomal protein L 26.5 1.4E+02 0.0048 21.7 5.5 46 77-147 13-60 (190)
55 3u5e_H L8, RP24, YL11, 60S rib 25.3 1.9E+02 0.0063 21.0 6.0 46 77-147 13-59 (191)
56 3t3l_A Frataxin, mitochondrial 25.0 46 0.0016 22.8 2.5 17 130-146 40-56 (129)
57 2kgs_A Uncharacterized protein 24.7 57 0.002 22.0 2.9 27 72-99 2-28 (132)
58 2uwa_A Cellulase; glycoside hy 23.8 1.3E+02 0.0045 22.9 5.2 43 76-126 31-74 (274)
59 2hyk_A Beta-1,3-glucanase; fam 21.8 62 0.0021 24.0 2.9 47 77-126 49-99 (245)
60 1n91_A ORF, hypothetical prote 20.4 1.9E+02 0.0065 19.0 4.9 37 59-97 8-45 (108)
61 1ulv_A Glucodextranase; GH fam 20.3 1.7E+02 0.006 26.8 6.0 95 51-149 805-915 (1020)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=100.00 E-value=8.2e-35 Score=213.43 Aligned_cols=150 Identities=67% Similarity=1.055 Sum_probs=121.6
Q ss_pred CCccccccCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCccCCCCCCCCcccccceeEEEECCCeEEEEEEcCCccCcC
Q 031218 1 MSLIPSFFGNRRSSVFDPFSLDVW-DPFRDFPLSASSFPSAVSSQFPGEASAFVNTRVDWKETPEAHVFKADLPGLRKEE 79 (163)
Q Consensus 1 M~l~p~~~~~~~~~~~~pf~~~~~-d~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~di~e~~~~~~l~~~lPG~~~ed 79 (163)
||++. +.+.|+||+ ++| ++|..+......++ ...+.....+.|++||+|++++|+|.++|||++++|
T Consensus 1 ms~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~di~e~~d~~~v~~dlPGv~ked 68 (151)
T 1gme_A 1 MSIVR------RSNVFDPFA-DLWADPFDTFRSIVPAIS-----GGGSETAAFANARMDWKETPEAHVFKADLPGVKKEE 68 (151)
T ss_dssp -CCCC------SCCCBCTTC-GGGSSHHHHHHHHGGGTT-----SSCCSHHHHGGGCEEEEECSSEEEEEEECTTCCGGG
T ss_pred Ccccc------cccccCchH-hhhhchhhhhhhhccccc-----ccccccccccCCceEEEEcCCEEEEEEECCCCChHH
Confidence 78773 257899998 888 77743210000001 012345567789999999999999999999999999
Q ss_pred eEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEEeCCEEEEEEeCcCcccCCcceEE
Q 031218 80 VKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAI 159 (163)
Q Consensus 80 i~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~~~~~~~~~~I 159 (163)
|+|++++|+.|+|+|++....+.++.+|+++||.+|.|.|+|.||.+||.++|+|+|+||+|+|++||.. +.+++.++|
T Consensus 69 I~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~-~~~~~~~~I 147 (151)
T 1gme_A 69 VKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAE-VKKPEVKAI 147 (151)
T ss_dssp EEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCC-CCTTCCCCC
T ss_pred EEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECCEEEEEEEccC-cCCCCCeEe
Confidence 9999964569999999887766677899999999999999999999999999999999999999999998 666667899
Q ss_pred eccC
Q 031218 160 QISG 163 (163)
Q Consensus 160 ~I~~ 163 (163)
+|+|
T Consensus 148 ~I~~ 151 (151)
T 1gme_A 148 QISG 151 (151)
T ss_dssp CCCC
T ss_pred eeCC
Confidence 9986
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.97 E-value=2.6e-30 Score=191.27 Aligned_cols=105 Identities=29% Similarity=0.357 Sum_probs=95.0
Q ss_pred cceeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEee-eeeEEEEEEECCCCcccCCe
Q 031218 54 NTRVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVER-SSGMFSRRFRLPENAKMDRI 132 (163)
Q Consensus 54 ~p~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~-~~g~f~r~~~LP~~vd~~~i 132 (163)
.+++||+|++++|+|.++|||++++||+|+++++ .|+|+|++......++.+++++|| .+|.|.|+|.||.+||.++|
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i 134 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENA 134 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccE
Confidence 3449999999999999999999999999999974 999999988765556778999999 99999999999999999999
Q ss_pred EEEEeCCEEEEEEeCcCcccCCcceEEecc
Q 031218 133 KASMENGVLTVTVPKAEEAKKAHVRAIQIS 162 (163)
Q Consensus 133 ~A~~~~GvL~I~~pK~~~~~~~~~~~I~I~ 162 (163)
+|+|+||+|+|++||.+ ..+ .++|+|+
T Consensus 135 ~A~~~nGvL~I~lpK~~-~~~--~r~I~Ie 161 (161)
T 4eld_A 135 SAKFENGVLSVILPKAE-SSI--KKGINIE 161 (161)
T ss_dssp EEEEETTEEEEEEEBCG-GGS--CCCCCCC
T ss_pred EEEEECCEEEEEEEcCC-CCC--CcEeecC
Confidence 99999999999999987 544 4888886
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=5.4e-29 Score=170.42 Aligned_cols=97 Identities=38% Similarity=0.655 Sum_probs=91.0
Q ss_pred cccceeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCC
Q 031218 52 FVNTRVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDR 131 (163)
Q Consensus 52 ~~~p~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~ 131 (163)
.|.|++||+|++++|+|.++|||+++++|+|++++ +.|+|+|++......++.+|+++|+.+|.|.|+|.||.+||.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 47899999999999999999999999999999996 59999999988776677899999999999999999999999999
Q ss_pred eEEEEeCCEEEEEEeCcC
Q 031218 132 IKASMENGVLTVTVPKAE 149 (163)
Q Consensus 132 i~A~~~~GvL~I~~pK~~ 149 (163)
|+|+|+||+|+|++||.+
T Consensus 81 i~A~~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRP 98 (100)
T ss_dssp CEEEEETTEEEEEEEBC-
T ss_pred eEEEEeCCEEEEEEecCC
Confidence 999999999999999986
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=1.6e-27 Score=163.84 Aligned_cols=93 Identities=28% Similarity=0.427 Sum_probs=86.6
Q ss_pred ccccceeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccC
Q 031218 51 AFVNTRVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMD 130 (163)
Q Consensus 51 ~~~~p~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 130 (163)
+.|.|++||+|++++|+|.++|||+++++|+|++++ +.|+|+|++.. ..+|+++||.+|.|.|+|.||.+||.+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~~ 76 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRPA 76 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCTT
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcchh
Confidence 457899999999999999999999999999999996 59999999843 367888999999999999999999999
Q ss_pred CeEEEEeCCEEEEEEeCcC
Q 031218 131 RIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 131 ~i~A~~~~GvL~I~~pK~~ 149 (163)
+|+|+|+||+|+|++||..
T Consensus 77 ~i~A~~~~GvL~I~lpK~~ 95 (102)
T 4fei_A 77 SGVASLAGGVLTVRFEKLR 95 (102)
T ss_dssp CCEEEEETTEEEEEEEBSS
T ss_pred HcEEEEECCEEEEEEEccC
Confidence 9999999999999999987
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=7.2e-27 Score=165.59 Aligned_cols=94 Identities=33% Similarity=0.426 Sum_probs=86.6
Q ss_pred cccceeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCC
Q 031218 52 FVNTRVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDR 131 (163)
Q Consensus 52 ~~~p~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~ 131 (163)
.+.|++||+|++++|+|.++|||++++||+|++++++.|+|+|++.... +.+|+++||.+ .|.|+|.||.+||.++
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~ 97 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDA 97 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTC
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcch
Confidence 4569999999999999999999999999999999624899999986643 67899999999 9999999999999999
Q ss_pred e-EEEEeCCEEEEEEeCcC
Q 031218 132 I-KASMENGVLTVTVPKAE 149 (163)
Q Consensus 132 i-~A~~~~GvL~I~~pK~~ 149 (163)
| +|+|+||+|+|++||..
T Consensus 98 i~~A~~~~GvL~I~lPK~~ 116 (123)
T 3aab_A 98 EISGKYENGVLTIRIPIAG 116 (123)
T ss_dssp CCEEEEETTEEEEEEEGGG
T ss_pred hCeeEEcCCEEEEEEEcCC
Confidence 9 99999999999999987
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=3.5e-25 Score=153.17 Aligned_cols=99 Identities=25% Similarity=0.443 Sum_probs=84.7
Q ss_pred ceeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEE
Q 031218 55 TRVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKA 134 (163)
Q Consensus 55 p~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A 134 (163)
...+|+|++++|+|.++|||++++||+|++.+ +.|+|+|++..... +..|+++ .|.|+|.||.+||.++|+|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~~~-----eF~R~~~LP~~vd~~~i~A 74 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQD--DHGYISR-----EFHRRYRLPSNVDQSALSC 74 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEET--TTEEEEE-----EEEEEEECCTTBCTTSCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccC--CCCEEEE-----EEEEEEECCCCcChhHcEE
Confidence 45799999999999999999999999999997 48999999765432 3345543 5999999999999999999
Q ss_pred EE-eCCEEEEEEeCcCccc---CCcceEEecc
Q 031218 135 SM-ENGVLTVTVPKAEEAK---KAHVRAIQIS 162 (163)
Q Consensus 135 ~~-~~GvL~I~~pK~~~~~---~~~~~~I~I~ 162 (163)
+| +||+|+|++||.. +. ..+.|+|+|+
T Consensus 75 ~~s~~GvL~I~~PK~~-~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 75 SLSADGMLTFSGPKIP-SGVDAGHSERAIPVS 105 (106)
T ss_dssp EECTTSEEEEEEEBCC-CCTTTTSSSCCCCCC
T ss_pred EECCCCEEEEEEEccC-cccccCCCCeEeeec
Confidence 99 8999999999998 43 2467899986
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.92 E-value=1.3e-24 Score=149.01 Aligned_cols=96 Identities=20% Similarity=0.325 Sum_probs=80.6
Q ss_pred eeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEE
Q 031218 56 RVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKAS 135 (163)
Q Consensus 56 ~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~ 135 (163)
.+||+|++++|+|.++|||++++||+|+++++ .|+|+|++.... ++..|+++| |.|+|.||.+||.++|+|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~ 74 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSA 74 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTCCEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHCEEE
Confidence 47899999999999999999999999999974 999999987543 334566544 9999999999999999999
Q ss_pred E-eCCEEEEEEeCcCcccCCcceEEe
Q 031218 136 M-ENGVLTVTVPKAEEAKKAHVRAIQ 160 (163)
Q Consensus 136 ~-~~GvL~I~~pK~~~~~~~~~~~I~ 160 (163)
| +||+|+|++||.. +.++....|.
T Consensus 75 ~s~nGvL~I~lPK~~-~~~~~~~~i~ 99 (101)
T 2wj5_A 75 LSPEGVLSIQATPAS-AQASLPSPPA 99 (101)
T ss_dssp ECTTSEEEEEECBCC-CCCSSCC---
T ss_pred ECCCCEEEEEEECCC-cCCCCCCccc
Confidence 9 8999999999988 6666555543
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.90 E-value=1.3e-23 Score=139.71 Aligned_cols=83 Identities=23% Similarity=0.449 Sum_probs=69.4
Q ss_pred EEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEEe-
Q 031218 59 WKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASME- 137 (163)
Q Consensus 59 i~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~- 137 (163)
+.|++++|+|.++|||++++||+|+++++ .|+|+|++...... . +..+|+|.|+|.||.+||.++|+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~--~-----~~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDE--H-----GYISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCC--C-----CEEEEEEEEEEECCCCcChHHcEEEECC
Confidence 46899999999999999999999999975 99999998764322 1 124679999999999999999999998
Q ss_pred CCEEEEEEeCcC
Q 031218 138 NGVLTVTVPKAE 149 (163)
Q Consensus 138 ~GvL~I~~pK~~ 149 (163)
||+|+|++||.+
T Consensus 74 ~GvL~I~lPK~k 85 (85)
T 3q9p_A 74 EGTLTVEAPMPK 85 (85)
T ss_dssp TSEEEEEEECCC
T ss_pred CCEEEEEEEcCC
Confidence 999999999963
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.90 E-value=2.7e-23 Score=155.38 Aligned_cols=97 Identities=25% Similarity=0.433 Sum_probs=72.5
Q ss_pred eeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEE
Q 031218 56 RVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKAS 135 (163)
Q Consensus 56 ~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~ 135 (163)
.+||+|++++|+|.++|||++++||+|+++++ .|+|+|++.... ++..|+++ .|.|+|.||.+||.++|+|+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~--~~~~~~~r-----eF~R~~~LP~~Vd~~~i~A~ 136 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQ--DEHGFISR-----EFHRKYRIPADVDPLTITSS 136 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEE--ETTEEEEE-----EEEEEEECTTTCCTTTCEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccc--cCCceEEE-----EEEEEEECCCCcChhHeEEE
Confidence 47999999999999999999999999999975 999999986643 23456554 49999999999999999999
Q ss_pred E-eCCEEEEEEeCcCcccCCcceEEecc
Q 031218 136 M-ENGVLTVTVPKAEEAKKAHVRAIQIS 162 (163)
Q Consensus 136 ~-~~GvL~I~~pK~~~~~~~~~~~I~I~ 162 (163)
| +||+|+|++||.+ ..+ ..++|+|+
T Consensus 137 ~s~dGvL~I~lPK~~-~~~-~~r~I~I~ 162 (175)
T 2klr_A 137 LSSDGVLTVNGPRKQ-VSG-PERTIPIT 162 (175)
T ss_dssp ECTTSCEEEEEECC--------------
T ss_pred EcCCCEEEEEEECCC-CCC-CCeEEEEe
Confidence 9 7999999999987 433 35788886
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.89 E-value=1.8e-22 Score=135.57 Aligned_cols=85 Identities=26% Similarity=0.454 Sum_probs=68.9
Q ss_pred ECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEE-eCC
Q 031218 61 ETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASM-ENG 139 (163)
Q Consensus 61 e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~-~~G 139 (163)
+++++|+|.++|||++++||+|++.++ .|+|+|++.... ++..|+++ .|.|+|.||.+||.++|+|+| +||
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~--~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~G 74 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQ--DEHGFISR-----EFHRKYRIPADVDPLTITSSMSSDG 74 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEE--CSSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTS
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEeccc--CCCCEEEE-----EEEEEEECCCCcChhHcEEEECCCC
Confidence 678999999999999999999999974 999999987653 34556654 499999999999999999999 899
Q ss_pred EEEEEEeCcCcccCC
Q 031218 140 VLTVTVPKAEEAKKA 154 (163)
Q Consensus 140 vL~I~~pK~~~~~~~ 154 (163)
+|+|++||.. ++++
T Consensus 75 vL~I~~pK~~-~~~p 88 (90)
T 2y1y_A 75 VLTVNGPRKQ-VSGP 88 (90)
T ss_dssp EEEEEECBC------
T ss_pred EEEEEEEcCC-CCCC
Confidence 9999999987 4443
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=5.7e-22 Score=160.14 Aligned_cols=88 Identities=18% Similarity=0.314 Sum_probs=79.8
Q ss_pred ccceeEEEECCC----eEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcc
Q 031218 53 VNTRVDWKETPE----AHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAK 128 (163)
Q Consensus 53 ~~p~~di~e~~~----~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd 128 (163)
+.|++||+|+++ +|+|.++|||+++++|+|+++++ .|+|+|++..+.+ + ++.+|.|.|+|.||.+||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e--~------~r~~g~F~R~~~LP~~Vd 167 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACG--D------AAMSESVGRSIPLPPSVD 167 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTT--C------CCBCCCEEEEEECCTTBC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCC--C------CEEEEEEEEEEECCCCcc
Confidence 679999999999 99999999999999999999974 9999999864322 1 177899999999999999
Q ss_pred cCCeEEEEe-CCEEEEEEeCcC
Q 031218 129 MDRIKASME-NGVLTVTVPKAE 149 (163)
Q Consensus 129 ~~~i~A~~~-~GvL~I~~pK~~ 149 (163)
.++|+|+|+ ||||+|++||..
T Consensus 168 ~e~i~A~~~~nGVL~I~lPK~~ 189 (314)
T 2bol_A 168 RNHIQATITTDDVLVIEAPVNE 189 (314)
T ss_dssp GGGCEEEECSSSEEEEEEEBSS
T ss_pred ccccEEEEeCCCEEEEEEeccC
Confidence 999999999 999999999987
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.83 E-value=1.6e-20 Score=151.75 Aligned_cols=90 Identities=17% Similarity=0.272 Sum_probs=70.6
Q ss_pred ceeEEEECC---CeEEEEEEc-CCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccC
Q 031218 55 TRVDWKETP---EAHVFKADL-PGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMD 130 (163)
Q Consensus 55 p~~di~e~~---~~~~l~~~l-PG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 130 (163)
..++|.+++ +.|.+.++| ||++++||+|++++ +.|+|+|+++.+.+ .++++|+.+|.|.|+|.||++||.+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~ 295 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDAS 295 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC----------------CEEEEEEEECSSEECGG
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChH
Confidence 446776655 578999999 99999999999986 59999999876432 4688899999999999999999999
Q ss_pred CeEEEEeCCEEEEEEeCcC
Q 031218 131 RIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 131 ~i~A~~~~GvL~I~~pK~~ 149 (163)
+|+|+|+||||+|++||.+
T Consensus 296 ~i~A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 296 KTQAEIVDGLMVVEAPLFK 314 (314)
T ss_dssp GCEEEEETTEEEEEEEEEC
T ss_pred HeEEEEeCCEEEEEEecCC
Confidence 9999999999999999863
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.13 E-value=2.6e-10 Score=78.91 Aligned_cols=81 Identities=15% Similarity=0.235 Sum_probs=70.8
Q ss_pred ccceeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCe
Q 031218 53 VNTRVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRI 132 (163)
Q Consensus 53 ~~p~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i 132 (163)
..|+++|+++++.+.|.+.+||+.++++.|.+.+ +.|.|++... ++ ..|...+.|+..|+++..
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~-----~~----------~~y~~~~~L~~~I~~e~s 71 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLP-----SG----------EDYNLKLELLHPIIPEQS 71 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECT-----TS----------SEEEEEECBSSCCCGGGE
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeC-----CC----------cEEEEEeeCCCcCCcccc
Confidence 3578999999999999999999999999999986 4899997642 11 147788999999999999
Q ss_pred EEEEeCCEEEEEEeCcC
Q 031218 133 KASMENGVLTVTVPKAE 149 (163)
Q Consensus 133 ~A~~~~GvL~I~~pK~~ 149 (163)
++++.+|.|+|+|+|..
T Consensus 72 ~~~~~~~~l~i~L~K~~ 88 (114)
T 1rl1_A 72 TFKVLSTKIEIKLKKPE 88 (114)
T ss_dssp EEEECSSSEEEEEECSS
T ss_pred EEEEECCEEEEEEEcCC
Confidence 99999999999999976
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.09 E-value=3e-10 Score=75.42 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=70.0
Q ss_pred cceeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeE
Q 031218 54 NTRVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIK 133 (163)
Q Consensus 54 ~p~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~ 133 (163)
.|+++++++++.+.|.+.+||+.++++.|.+.+ +.|.|++... ++ ..|...+.|+..|+++..+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~-----~~----------~~y~~~~~L~~~I~~~~s~ 65 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVP-----GE----------DAYYLQPRLFGKIIPDKCK 65 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCT-----TS----------CCEEECCBBSSCBCGGGCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcC-----CC----------cEEEEeeEcCCccCchhEE
Confidence 478999999999999999999999999999987 4899987532 11 1477889999999999999
Q ss_pred EEEeCCEEEEEEeCcC
Q 031218 134 ASMENGVLTVTVPKAE 149 (163)
Q Consensus 134 A~~~~GvL~I~~pK~~ 149 (163)
+++.+|.|+|+|.|..
T Consensus 66 ~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 66 YEVLSTKIEICLAKAD 81 (92)
T ss_dssp EEECSSCEEEEEEBSS
T ss_pred EEEECCEEEEEEEcCC
Confidence 9999999999999987
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.53 E-value=1.2e-06 Score=60.12 Aligned_cols=78 Identities=15% Similarity=0.294 Sum_probs=67.1
Q ss_pred ccccceeEEEECCCeEEEEEEcCCcc--CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCc-
Q 031218 51 AFVNTRVDWKETPEAHVFKADLPGLR--KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENA- 127 (163)
Q Consensus 51 ~~~~p~~di~e~~~~~~l~~~lPG~~--~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v- 127 (163)
....|...+.++++.++|.+.+|-++ ..++++.+++ +.+....+ .|.-++.||..+
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~~--------------------PYyLRL~lP~~vv 72 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS--------------------PYYLRLRFPHELI 72 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEET--------------------TEEEEEECSSCEE
T ss_pred CEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEecC--------------------CeEEEEecCccee
Confidence 34579999999999999999999877 7899999985 67877743 477889999996
Q ss_pred ccCCeEEEE--eCCEEEEEEeCcC
Q 031218 128 KMDRIKASM--ENGVLTVTVPKAE 149 (163)
Q Consensus 128 d~~~i~A~~--~~GvL~I~~pK~~ 149 (163)
+.++.+|+| ++|.++|++||..
T Consensus 73 ed~~~~A~YD~d~g~~~v~lpK~~ 96 (115)
T 3eud_A 73 DDERSTAQYDSKDECINVKVAKLN 96 (115)
T ss_dssp CSTTCEEEEETTTTEEEEEEEESS
T ss_pred cCCCcceEEeCCCcEEEEEEcCCc
Confidence 778889999 5999999999987
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.52 E-value=2.2e-07 Score=65.76 Aligned_cols=75 Identities=16% Similarity=0.286 Sum_probs=66.0
Q ss_pred cceeEEEECCCeEEEEEEcCCcc--CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCc-ccC
Q 031218 54 NTRVDWKETPEAHVFKADLPGLR--KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENA-KMD 130 (163)
Q Consensus 54 ~p~~di~e~~~~~~l~~~lPG~~--~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v-d~~ 130 (163)
.|.+.+.++++.++|.+.+|..+ ..++++.+++ ..+..... .|.-++.||..| +.+
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~~--------------------PYyLRL~LP~~V~e~~ 61 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS--------------------PYYLRLRFPHELIDDE 61 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECSS--------------------SSCEEECCSSCEECCS
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEecC--------------------CeEEEecCCCeeecCC
Confidence 68999999999999999999999 8999999985 67877732 366779999997 888
Q ss_pred CeEEEE--eCCEEEEEEeCcC
Q 031218 131 RIKASM--ENGVLTVTVPKAE 149 (163)
Q Consensus 131 ~i~A~~--~~GvL~I~~pK~~ 149 (163)
..+|+| +.|.|+|++||..
T Consensus 62 ~~kA~YD~d~~~~~VtLpK~~ 82 (134)
T 2k8q_A 62 RSTAQYDSKDECINVKVAKLN 82 (134)
T ss_dssp SCEEEEETTTTEEEEEEEESS
T ss_pred CcceeEeccCCEEEEEEeCCC
Confidence 899999 5999999999987
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.34 E-value=1.8e-06 Score=71.06 Aligned_cols=73 Identities=18% Similarity=0.237 Sum_probs=60.7
Q ss_pred cceeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCC-e
Q 031218 54 NTRVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDR-I 132 (163)
Q Consensus 54 ~p~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~-i 132 (163)
.+++.|.+. .|.+.+.|||+++++|++...+ ..|+|+ .|.|+|.|.||..+.... .
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~g-deL~v~--------------------~g~~rR~i~LP~~L~~~~v~ 353 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYG-PEVTVE--------------------AGDQRRNIFLPPALSGRPIT 353 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEET-TEEEEE--------------------ETTEEEEEECCTTTTTCCEE
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEEC-CeEEEE--------------------ECCEeecccCCHHHcCCCcc
Confidence 345666444 8999999999999999999985 589999 568999999999876665 6
Q ss_pred EEEEeCCEEEEEEeCcC
Q 031218 133 KASMENGVLTVTVPKAE 149 (163)
Q Consensus 133 ~A~~~~GvL~I~~pK~~ 149 (163)
.|+|+||.|+|++-...
T Consensus 354 ~A~~~~~~L~i~~~~~~ 370 (374)
T 3igf_A 354 GAKFQNNYLIISFLEHH 370 (374)
T ss_dssp EEEEETTEEEEEECCC-
T ss_pred ccEEECCEEEEEEehhc
Confidence 79999999999997654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.07 E-value=4.9e-05 Score=53.20 Aligned_cols=80 Identities=13% Similarity=0.200 Sum_probs=66.8
Q ss_pred cceeEEEECCCeEEEEEEcCCc---cCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEE-CCCCccc
Q 031218 54 NTRVDWKETPEAHVFKADLPGL---RKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFR-LPENAKM 129 (163)
Q Consensus 54 ~p~~di~e~~~~~~l~~~lPG~---~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~-LP~~vd~ 129 (163)
.++++|+++.+.+.|.+.+||+ .++++.|.+.+ +.|.|.+.... +. .|.-.+. |-..|++
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~-----~~----------~y~~~~~~L~~~I~~ 83 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN-----GK----------SYSMIVNNLLKPISV 83 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS-----SS----------CEEEEEECBSSCCCT
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC-----CC----------cEEEEhHHhcCccCc
Confidence 4689999999999999999999 88999999986 58988863211 11 3556675 9999999
Q ss_pred CCeEEEEeCCEEEEEEeCcC
Q 031218 130 DRIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 130 ~~i~A~~~~GvL~I~~pK~~ 149 (163)
+..+.....+.+.|+|-|..
T Consensus 84 e~S~~~v~~~kVei~L~K~~ 103 (127)
T 1x5m_A 84 EGSSKKVKTDTVLILCRKKV 103 (127)
T ss_dssp TTCEEEEETTEEEEEEECSS
T ss_pred ccCEEEEeCCEEEEEEEECC
Confidence 99999999999999999987
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.03 E-value=0.00011 Score=51.13 Aligned_cols=81 Identities=14% Similarity=0.243 Sum_probs=65.4
Q ss_pred ccceeEEEECCCeEEEEEEcC-Cc-cCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccC
Q 031218 53 VNTRVDWKETPEAHVFKADLP-GL-RKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMD 130 (163)
Q Consensus 53 ~~p~~di~e~~~~~~l~~~lP-G~-~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 130 (163)
..|.+.+.++.+...|.+.|| |+ ++++|.|.+.. +.|.|..+.. .+. .+.-...|...|+++
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~-----~~~----------~~~~~~~L~~~I~~e 81 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE-----NGE----------RVLMEGKLTHKINTE 81 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS-----SSE----------EEEEEEEBSSCBCTT
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc-----CCC----------ceEEcccccCcCCCc
Confidence 458899999999999999999 88 89999999987 5898886421 111 123456799999999
Q ss_pred CeEEEEeCCE-EEEEEeCcC
Q 031218 131 RIKASMENGV-LTVTVPKAE 149 (163)
Q Consensus 131 ~i~A~~~~Gv-L~I~~pK~~ 149 (163)
.....++++- |.|+|-|..
T Consensus 82 ~S~w~i~~~k~v~i~L~K~~ 101 (124)
T 1wgv_A 82 SSLWSLEPGKCVLVNLSKVG 101 (124)
T ss_dssp TCEEEECTTSEEEEEECBSS
T ss_pred CCEEEEeCCCEEEEEEEECC
Confidence 9999998875 999999975
No 20
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.01 E-value=4e-05 Score=54.32 Aligned_cols=88 Identities=10% Similarity=0.126 Sum_probs=68.8
Q ss_pred ccceeEEEEC-CCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeee-----cCCCCcEEEEeeeeeEEEEEEECCCC
Q 031218 53 VNTRVDWKET-PEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEK-----EDKSDTWHRVERSSGMFSRRFRLPEN 126 (163)
Q Consensus 53 ~~p~~di~e~-~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~-----~~~~~~~~~~e~~~g~f~r~~~LP~~ 126 (163)
..++++|+++ .+.+.|.+.++++.++++.|.+.+ +.|.|........ ...+.. -.|.-.+.|-..
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~l~~~~a~g~~--------~~y~~~~~L~~~ 88 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNFLRLHPGCGPH--------TTFRWQVKLRNL 88 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHHHHHSTTCCTT--------SCEEEEEEBSSC
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcccccccccCcc--------eeEEEecccccc
Confidence 3578999999 999999999999999999999987 5898886432110 000000 036667889999
Q ss_pred cccCCeEEEEeCCEEEEEEeCcC
Q 031218 127 AKMDRIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 127 vd~~~i~A~~~~GvL~I~~pK~~ 149 (163)
|+++..+.+...+.+.|+|.|++
T Consensus 89 I~pe~S~~~v~~~kIeI~L~K~e 111 (134)
T 1wh0_A 89 IEPEQCTFCFTASRIDICLRKRQ 111 (134)
T ss_dssp EEEEEEEEEECSSEEEEEEEESS
T ss_pred CCchhCEEEEeCCEEEEEEEECC
Confidence 99998888888999999999976
No 21
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.79 E-value=0.00017 Score=50.30 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=64.1
Q ss_pred eeEEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEE
Q 031218 56 RVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKAS 135 (163)
Q Consensus 56 ~~di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~ 135 (163)
.++++++.+.+.|++.+|+. +++.|.++. +.|.+++.... ++ ..|.-.+.|-..|+++..+.+
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~----~~----------~~y~~~l~L~~~I~~e~S~~~ 67 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGS----DN----------FKHLNEIDLFHCIDPNDSKHK 67 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETT----TT----------EEEEEEEEBSSCEEEEEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCC----CC----------ceEEEEEEccceeccccCEEE
Confidence 79999999999999999996 689999987 48999876411 11 136677899999999999999
Q ss_pred EeCCEEEEEEeCcC
Q 031218 136 MENGVLTVTVPKAE 149 (163)
Q Consensus 136 ~~~GvL~I~~pK~~ 149 (163)
..+..+.|+|.|..
T Consensus 68 v~~~kiei~L~K~~ 81 (125)
T 1ejf_A 68 RTDRSILCCLRKGE 81 (125)
T ss_dssp ECSSCEEEEEEESS
T ss_pred ECCCEEEEEEEECC
Confidence 98889999999986
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.72 E-value=0.00033 Score=48.55 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=64.9
Q ss_pred cccccceeEEEECCCeEEEEEEcC-C--ccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCC
Q 031218 50 SAFVNTRVDWKETPEAHVFKADLP-G--LRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPEN 126 (163)
Q Consensus 50 ~~~~~p~~di~e~~~~~~l~~~lP-G--~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~ 126 (163)
.+...|.+.+.++.+.+.|.+.|| | ++.++|.|.+.. +.|.|..+.. . +.-...|...
T Consensus 12 nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~g~L~~~ 72 (121)
T 3qor_A 12 NGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ--------P----------AIIDGELYNE 72 (121)
T ss_dssp SSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS--------C----------CSEEEEBSSC
T ss_pred CCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc--------c----------eEEecccccc
Confidence 344568899999999999999999 4 789999999997 4788764210 0 1124578899
Q ss_pred cccCCeEEEEeCC-EEEEEEeCcC
Q 031218 127 AKMDRIKASMENG-VLTVTVPKAE 149 (163)
Q Consensus 127 vd~~~i~A~~~~G-vL~I~~pK~~ 149 (163)
|+++.....+++| .|.|+|-|..
T Consensus 73 I~~deS~w~i~~~~~i~i~L~K~~ 96 (121)
T 3qor_A 73 VKVEESSWLIADGAVVTVHLEKIN 96 (121)
T ss_dssp BCGGGCEEEEETTTEEEEEEEBSS
T ss_pred ccccccEEEEcCCCEEEEEEEECC
Confidence 9999999999998 9999999976
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.68 E-value=0.00027 Score=49.57 Aligned_cols=78 Identities=19% Similarity=0.277 Sum_probs=63.6
Q ss_pred ccceeEEEECCCeEEEEEEcC-C--ccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCccc
Q 031218 53 VNTRVDWKETPEAHVFKADLP-G--LRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKM 129 (163)
Q Consensus 53 ~~p~~di~e~~~~~~l~~~lP-G--~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~ 129 (163)
..|.+.|.++.+...|.+.|| | +++++|.|.+.. +.|.|..+.. . +.-...|...|++
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~~~L~~~I~~ 66 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ--------P----------PVVDGELYNEVKV 66 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS--------C----------CSBCSCBSSCBCS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc--------e----------EEEeccccccccc
Confidence 457899999999999999999 6 899999999997 5898885310 0 0112457889999
Q ss_pred CCeEEEEeCC-EEEEEEeCcC
Q 031218 130 DRIKASMENG-VLTVTVPKAE 149 (163)
Q Consensus 130 ~~i~A~~~~G-vL~I~~pK~~ 149 (163)
+.....+++| .|.|+|-|..
T Consensus 67 e~s~w~i~~~k~v~i~L~K~~ 87 (131)
T 1wfi_A 67 EESSWLIEDGKVVTVHLEKIN 87 (131)
T ss_dssp TTCEEEEETTTEEEEEEEBSS
T ss_pred ccCEEEEcCCCEEEEEEEECC
Confidence 9999999998 8999999986
No 24
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.65 E-value=0.00059 Score=49.47 Aligned_cols=78 Identities=14% Similarity=0.252 Sum_probs=64.6
Q ss_pred cccceeEEEECCCeEEEEEEcC-CccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccC
Q 031218 52 FVNTRVDWKETPEAHVFKADLP-GLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMD 130 (163)
Q Consensus 52 ~~~p~~di~e~~~~~~l~~~lP-G~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 130 (163)
...|.+.|.++.+.+.|.+.|| |++.++|.|.+.. +.|.|..+ +. . .-...|...|+++
T Consensus 11 ~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--------g~----------~-~l~g~L~~~I~~e 70 (157)
T 2rh0_A 11 CGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--------GR----------E-ILKGKLFDSTIAD 70 (157)
T ss_dssp EECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--------TE----------E-EEEEEBSSCBCGG
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--------CE----------E-EEeeccccccCcc
Confidence 3568899999999999999998 8999999999997 58888753 10 0 1246789999999
Q ss_pred CeEEEEeCCE-EEEEEeCcC
Q 031218 131 RIKASMENGV-LTVTVPKAE 149 (163)
Q Consensus 131 ~i~A~~~~Gv-L~I~~pK~~ 149 (163)
....+++++. |.|+|-|..
T Consensus 71 eS~w~i~~~k~v~I~L~K~~ 90 (157)
T 2rh0_A 71 EGTWTLEDRKMVRIVLTKTK 90 (157)
T ss_dssp GCEEEEECCCEEEEEEEBSS
T ss_pred ccEEEEcCCcEEEEEEEEcC
Confidence 9999998875 999999987
No 25
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.60 E-value=0.00069 Score=47.51 Aligned_cols=76 Identities=11% Similarity=0.213 Sum_probs=61.0
Q ss_pred cceeEEEECCCeEEEEEEcC-CccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCe
Q 031218 54 NTRVDWKETPEAHVFKADLP-GLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRI 132 (163)
Q Consensus 54 ~p~~di~e~~~~~~l~~~lP-G~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i 132 (163)
.|.+.+.++.+.+.|.+.|| |+++++|.|.+.. +.|.|.++ +. . .-...|...|+++..
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--------g~----------~-~~~~~L~~~I~~e~S 63 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--------GE----------I-VIDGELLHEVDVSSL 63 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--------TE----------E-EEEEEBSSCEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--------CE----------e-eEccccccccccccC
Confidence 47899999999999999996 9999999999997 48888752 10 1 123678899999999
Q ss_pred EEEEeCCEEEEEEeCcC
Q 031218 133 KASMENGVLTVTVPKAE 149 (163)
Q Consensus 133 ~A~~~~GvL~I~~pK~~ 149 (163)
...+.++.|.|+|-|..
T Consensus 64 ~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 64 WWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEETTEEEEEEEESS
T ss_pred EEEEeCCEEEEEEEECC
Confidence 99999999999999874
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.54 E-value=0.00024 Score=51.21 Aligned_cols=77 Identities=16% Similarity=0.300 Sum_probs=63.2
Q ss_pred cceeEEEECCCeEEEEEEcCCccCcCeEEEEe-CCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCe
Q 031218 54 NTRVDWKETPEAHVFKADLPGLRKEEVKVEVE-DDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRI 132 (163)
Q Consensus 54 ~p~~di~e~~~~~~l~~~lPG~~~edi~v~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i 132 (163)
.|.++++++.+.++|++.++++ +++.|.++ . +.|.+++. .. .+ ..|.-.+.|-..|+++ .
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~----~~----------~~y~~~l~L~~~Idpe-S 64 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-GA----QG----------ERFEFSLELYGKIMTE-Y 64 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-TT----TT----------EEEEEEEEBSSCEEEE-E
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-cC----CC----------ceEEEEeEhhhccccc-c
Confidence 5889999999999999999998 57888887 5 58999976 11 11 1466778899999999 8
Q ss_pred EEEEeCCEEEEEEeCcC
Q 031218 133 KASMENGVLTVTVPKAE 149 (163)
Q Consensus 133 ~A~~~~GvL~I~~pK~~ 149 (163)
+.+.....+.|+|.|+.
T Consensus 65 ~~~v~~~kIei~L~K~e 81 (150)
T 2kmw_A 65 RKNVGLRNIIFSIQKEE 81 (150)
T ss_dssp EEEEESSSEEEEEEECC
T ss_pred eEEecCCEEEEEEEECC
Confidence 88888888999999876
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.44 E-value=8.5e-05 Score=52.55 Aligned_cols=84 Identities=11% Similarity=0.240 Sum_probs=58.7
Q ss_pred cceeEEEECCCe-------EEEEEEcCCccCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCC
Q 031218 54 NTRVDWKETPEA-------HVFKADLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPEN 126 (163)
Q Consensus 54 ~p~~di~e~~~~-------~~l~~~lPG~~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~ 126 (163)
.|.+++.++.+. +.|++.+|++. ++.|.+.. +.|.+++.......... ...|.-.+.|...
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~---------~~~y~~~l~L~~~ 73 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDEN---------VHHYQLHIDLYKE 73 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC----------------CEEBCEEEECSSC
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCcc---------CceEEEEEEChhh
Confidence 578889888876 99999999984 78888876 58999866421000000 0146677899999
Q ss_pred cccCCeEEEEeCCE-EEEEEeCcC
Q 031218 127 AKMDRIKASMENGV-LTVTVPKAE 149 (163)
Q Consensus 127 vd~~~i~A~~~~Gv-L~I~~pK~~ 149 (163)
|+++..+.++.++. |.|+|.|..
T Consensus 74 Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 74 IIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CCSSSEEEEECCC--CEEEEEECS
T ss_pred ccccccEEEECCCEEEEEEEEECC
Confidence 99999999998888 999999976
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=83.05 E-value=2.8 Score=26.38 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=28.6
Q ss_pred EEEEEEECCCCcccCCeEEEEeCCEEEEEEeCcC
Q 031218 116 MFSRRFRLPENAKMDRIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 116 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 149 (163)
.|.-.+.|| +++.+.|+..+++|.|+|+.-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 577789999 589999999999999999998654
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=77.09 E-value=9.2 Score=24.43 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=28.6
Q ss_pred EEEEEEECCCCcccCCeEEEEeCCEEEEEEeCcC
Q 031218 116 MFSRRFRLPENAKMDRIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 116 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 149 (163)
.|.-.+.|| +++.+.|+..++++.|+|+.-+..
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 466779999 589999999999999999987765
No 30
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=77.02 E-value=11 Score=24.36 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=26.5
Q ss_pred eEEEEEEcC-CccCcCeEEEEeCCeEEEEEEEEee
Q 031218 65 AHVFKADLP-GLRKEEVKVEVEDDRVLQISGQRNI 98 (163)
Q Consensus 65 ~~~l~~~lP-G~~~edi~v~v~~~~~L~I~g~~~~ 98 (163)
.|.-.+.|| +++.+.++-++.+| .|+|+..+..
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~ 95 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLR 95 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSS
T ss_pred EEEEEEECCCCcchhHcEEEEECC-EEEEEEEccC
Confidence 344467899 68999999999987 9999977644
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=76.35 E-value=4.8 Score=25.51 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=28.7
Q ss_pred EEEEEEECCCCcccCCeEEEEeCCEEEEEEeCcC
Q 031218 116 MFSRRFRLPENAKMDRIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 116 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 149 (163)
.|.-.+.|| +++.+.|+..+.+|.|+|+.-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477789999 789999999999999999997654
No 32
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=73.05 E-value=15 Score=25.70 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=27.1
Q ss_pred EEEEEECCCCcccCCeEEEEeCCEEEEEEeCcC
Q 031218 117 FSRRFRLPENAKMDRIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 117 f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 149 (163)
|.-.+.|| +++.+.|+..+++|.|+|+.-+..
T Consensus 68 ~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred EEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 44458898 589999999999999999998765
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=72.78 E-value=6.8 Score=25.69 Aligned_cols=32 Identities=3% Similarity=0.099 Sum_probs=28.1
Q ss_pred EEEEEEECCCCcccCCeEEEEeCCEEEEEEeCc
Q 031218 116 MFSRRFRLPENAKMDRIKASMENGVLTVTVPKA 148 (163)
Q Consensus 116 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~ 148 (163)
.|.-.+.|| +++.+.|+..+++|.|+|+.-+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 577789999 68999999999999999999654
No 34
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=72.66 E-value=6.2 Score=25.61 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.6
Q ss_pred EEEEEEECCCCcccCCeEEEEeCCEEEEEEeCcC
Q 031218 116 MFSRRFRLPENAKMDRIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 116 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 149 (163)
.|.-.+.|| +++.+.|+..+++|.|+|+.-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 466779999 789999999999999999997754
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=68.76 E-value=11 Score=25.17 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=27.4
Q ss_pred EEEEEECCCCcccCCeEEEEeC-CEEEEEEeCcC
Q 031218 117 FSRRFRLPENAKMDRIKASMEN-GVLTVTVPKAE 149 (163)
Q Consensus 117 f~r~~~LP~~vd~~~i~A~~~~-GvL~I~~pK~~ 149 (163)
|.-.+.|| +++.+.|+..+.+ |.|+|+.-+..
T Consensus 36 ~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 36 LVVVADLA-GFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp EEEEEECC-SCCGGGCEEEEETTTEEEEEEECCC
T ss_pred EEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEec
Confidence 55558899 5899999999999 99999998765
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=61.76 E-value=17 Score=25.31 Aligned_cols=33 Identities=27% Similarity=0.309 Sum_probs=27.0
Q ss_pred eEEEEEEcC-CccCcCeEEEEeCCeEEEEEEEEee
Q 031218 65 AHVFKADLP-GLRKEEVKVEVEDDRVLQISGQRNI 98 (163)
Q Consensus 65 ~~~l~~~lP-G~~~edi~v~v~~~~~L~I~g~~~~ 98 (163)
.|.-.+.|| +++.+.|+-++.+| .|+|+..+..
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nG-vL~I~lPK~~ 138 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENG-VLTVTVPKAE 138 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETT-EEEEEEECCC
T ss_pred EEEEEEECCCCccccceEEEEECC-EEEEEEEccC
Confidence 466678898 78999999999987 9999987654
No 37
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=61.65 E-value=6.1 Score=24.26 Aligned_cols=16 Identities=38% Similarity=0.405 Sum_probs=12.7
Q ss_pred CCeEEEEeCCEEEEEE
Q 031218 130 DRIKASMENGVLTVTV 145 (163)
Q Consensus 130 ~~i~A~~~~GvL~I~~ 145 (163)
..|.|.|+||+|+-.=
T Consensus 3 k~IeAiYEnGVfkPLe 18 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQ 18 (69)
T ss_dssp CCEEEEEETTEEEESS
T ss_pred ceEEEEEECCEEeECC
Confidence 4599999999997433
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=55.20 E-value=15 Score=26.38 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=28.1
Q ss_pred EEEEEEECCCCcccCCeEEEEeCCEEEEEEeCcC
Q 031218 116 MFSRRFRLPENAKMDRIKASMENGVLTVTVPKAE 149 (163)
Q Consensus 116 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 149 (163)
.|.-.+.|| +++.+.|+.++.+|.|+|+.-+..
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 466678898 689999999999999999997654
No 39
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=43.07 E-value=1e+02 Score=23.26 Aligned_cols=65 Identities=9% Similarity=0.170 Sum_probs=38.8
Q ss_pred EcCCccCcCeEEEEe-CCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEEeCCEEEEE
Q 031218 71 DLPGLRKEEVKVEVE-DDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVT 144 (163)
Q Consensus 71 ~lPG~~~edi~v~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~ 144 (163)
.|||+..+==-+..+ +++.|.+.... ....+.-... |.+.|+++|...-|++.|... .+|.+.|.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~-------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK-------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET-------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC-------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 699998753336666 23456554221 2223333333 788899999877788877653 66655543
No 40
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=42.86 E-value=38 Score=22.03 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=14.8
Q ss_pred CcCeEEEEeCCeEEEEEEEE
Q 031218 77 KEEVKVEVEDDRVLQISGQR 96 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~ 96 (163)
|+.|+|++++ +.++|+|.+
T Consensus 20 P~gV~V~i~~-~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEET-TEEEEEETT
T ss_pred CCCCEEEEeC-CEEEEECCC
Confidence 4678899985 689999864
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=42.07 E-value=68 Score=23.89 Aligned_cols=45 Identities=20% Similarity=0.421 Sum_probs=29.9
Q ss_pred CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEEeCCEEEEEEeC
Q 031218 77 KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPK 147 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK 147 (163)
|+.|+|++++ +.++|+|.+ |...+.| +.. ++...++|.|.|+.+.
T Consensus 39 P~gV~V~i~~-~~VtVKGPk------------------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~ 83 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPK------------------GELTVPY--NTE-----LTVRQDGDQLLVERPS 83 (212)
T ss_pred CCCcEEEEeC-CEEEEECCC------------------EEEEEEC--CCC-----eEEEEECCEEEEEcCC
Confidence 4678899975 689999864 3344433 433 4455789988887654
No 42
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=40.66 E-value=45 Score=24.24 Aligned_cols=45 Identities=29% Similarity=0.478 Sum_probs=28.7
Q ss_pred CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEEeCCEEEEEEe
Q 031218 77 KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVP 146 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~p 146 (163)
|++|+|+++ |+.++|+|.+ |...+.|.-| . ++...+++.|.|...
T Consensus 14 P~gV~v~i~-~~~V~VkGpk------------------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVE-GYKVKVKGPK------------------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEES-SSEEEEECSS------------------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEe-CCEEEEEcCC------------------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 378899997 4689999754 3344443211 2 444578898888753
No 43
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=40.42 E-value=59 Score=23.42 Aligned_cols=45 Identities=29% Similarity=0.549 Sum_probs=30.3
Q ss_pred CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEEeCCEEEEEEeC
Q 031218 77 KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPK 147 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK 147 (163)
|+.|+|++++ +.++|+|.+ |...+.| +.. ++...+++.|.|+.+.
T Consensus 11 P~gV~V~i~~-~~VtVkGpk------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPK------------------GELTRTF--HPD-----MTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEEC--CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEc--CCC-----EEEEEeCCEEEEEcCC
Confidence 4678899985 689999764 3444444 443 4455789998887654
No 44
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=37.82 E-value=18 Score=23.84 Aligned_cols=17 Identities=35% Similarity=0.612 Sum_probs=14.8
Q ss_pred CeEEEEeCCEEEEEEeC
Q 031218 131 RIKASMENGVLTVTVPK 147 (163)
Q Consensus 131 ~i~A~~~~GvL~I~~pK 147 (163)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 48888999999999974
No 45
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=36.81 E-value=51 Score=22.13 Aligned_cols=30 Identities=20% Similarity=0.220 Sum_probs=23.3
Q ss_pred EEEEEEECCCCcccCCeEEEEeCCEEEEEE
Q 031218 116 MFSRRFRLPENAKMDRIKASMENGVLTVTV 145 (163)
Q Consensus 116 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~ 145 (163)
...-+|.||.+++.+.+...+...-|.|.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 455679999999999999999999999987
No 46
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=34.17 E-value=74 Score=22.95 Aligned_cols=47 Identities=19% Similarity=0.388 Sum_probs=30.4
Q ss_pred CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEEeCCEEEEEEeCc
Q 031218 77 KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKA 148 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~ 148 (163)
|+.|+|++++ +.++|+|.+ |..++.|. +.. ++...++|.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpk------------------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDN------------------GSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 3678899985 689999864 33444432 333 44557899988876543
No 47
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=32.52 E-value=34 Score=23.28 Aligned_cols=16 Identities=25% Similarity=0.619 Sum_probs=14.2
Q ss_pred eEEEEeCCEEEEEEeC
Q 031218 132 IKASMENGVLTVTVPK 147 (163)
Q Consensus 132 i~A~~~~GvL~I~~pK 147 (163)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7888999999999974
No 48
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=30.55 E-value=1.1e+02 Score=24.18 Aligned_cols=48 Identities=21% Similarity=0.349 Sum_probs=29.9
Q ss_pred cCcCeEEEEeCCeEEEEEEEEeeeecC-CC---CcEE-------EE--eeeeeEEEEEEECCCC
Q 031218 76 RKEEVKVEVEDDRVLQISGQRNIEKED-KS---DTWH-------RV--ERSSGMFSRRFRLPEN 126 (163)
Q Consensus 76 ~~edi~v~v~~~~~L~I~g~~~~~~~~-~~---~~~~-------~~--e~~~g~f~r~~~LP~~ 126 (163)
+++++.| ++| .|+|++.+...... .+ ..|. .+ ...+|.|+-++.||..
T Consensus 85 ~~~Nv~v--~dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSV--KKG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEE--ETT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEE--ECC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 5677655 466 79999987643110 01 1232 22 2567899999999975
No 49
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=29.23 E-value=69 Score=23.98 Aligned_cols=47 Identities=30% Similarity=0.333 Sum_probs=26.3
Q ss_pred CcCeEEEEeCCeEEEEEEEEeeee--cCCCCcEEE---EeeeeeEEEEEEECCCC
Q 031218 77 KEEVKVEVEDDRVLQISGQRNIEK--EDKSDTWHR---VERSSGMFSRRFRLPEN 126 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~~~~~--~~~~~~~~~---~e~~~g~f~r~~~LP~~ 126 (163)
++++ .+++| .|+|++.+.... .-.+.++.. ....+|.|+-++.||..
T Consensus 46 ~~nv--~v~~G-~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 46 IENA--RVGGG-VLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp TTTE--EEETT-EEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred CcCE--EEECC-EEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 4554 44566 799998765310 000111211 12357889999999964
No 50
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=29.23 E-value=37 Score=20.77 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=16.6
Q ss_pred CccCcCeEEEEeCCeEEEEEEEE
Q 031218 74 GLRKEEVKVEVEDDRVLQISGQR 96 (163)
Q Consensus 74 G~~~edi~v~v~~~~~L~I~g~~ 96 (163)
-|+.+.|.+....| .|.|+|+.
T Consensus 17 sFd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTE-EEEEEEEC
T ss_pred EECCCEEEEEeCce-EEEEEcCC
Confidence 35677888888765 88898875
No 51
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=28.20 E-value=1.1e+02 Score=21.96 Aligned_cols=44 Identities=25% Similarity=0.478 Sum_probs=29.3
Q ss_pred CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEEeCCEEEEEEe
Q 031218 77 KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVP 146 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~p 146 (163)
|++|+|++++ +.++|+|.+ |...+. |+.. ++...+++.|.|...
T Consensus 12 P~gV~v~i~~-~~v~VkGpk------------------G~L~~~--~~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPK------------------GELEVP--VSPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSS------------------CEEEEE--CCTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCC------------------cEEEEE--eCCC-----EEEEEECCEEEEEEC
Confidence 4788999985 689999754 334444 4443 444567998888754
No 52
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=27.82 E-value=40 Score=20.49 Aligned_cols=34 Identities=12% Similarity=0.276 Sum_probs=26.8
Q ss_pred EEEECCCeEEEEEEcCCccCcCeEEEEeCCeEEE
Q 031218 58 DWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQ 91 (163)
Q Consensus 58 di~e~~~~~~l~~~lPG~~~edi~v~v~~~~~L~ 91 (163)
.|....+.|.+++.+=|+....|.+.-.+|..+.
T Consensus 7 tWtDrtG~F~VeA~flg~~dgki~LhK~nGv~I~ 40 (68)
T 2hbp_A 7 LWVDRSGTFKVDAEFIGCAKGKIHLHKANGVKIA 40 (68)
T ss_dssp EEEBSSSCCEEEEEEEEEETTEEEEECTTSCEEE
T ss_pred EEEcCCCCeEEEEEEEEEeCCEEEEEecCCcEEE
Confidence 4677778999999999999888888877774333
No 53
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=27.72 E-value=82 Score=20.81 Aligned_cols=31 Identities=13% Similarity=0.306 Sum_probs=26.2
Q ss_pred EEEEEEECCCCc-ccCCeEEEEeCCEEEEEEe
Q 031218 116 MFSRRFRLPENA-KMDRIKASMENGVLTVTVP 146 (163)
Q Consensus 116 ~f~r~~~LP~~v-d~~~i~A~~~~GvL~I~~p 146 (163)
...-+|.||..+ +.+.+...+...-|+|.+.
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 456679999888 8999999999999999884
No 54
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=26.50 E-value=1.4e+02 Score=21.66 Aligned_cols=46 Identities=24% Similarity=0.350 Sum_probs=29.6
Q ss_pred CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEEE--eCCEEEEEEeC
Q 031218 77 KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASM--ENGVLTVTVPK 147 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~--~~GvL~I~~pK 147 (163)
|+.|+|++++ +.++|+|.+ |...+. |+. ..++..+ +++.|.|....
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------------------G~L~~~--~~~----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPR------------------GKLTRN--FKH----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEE--CCC----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------ceEEEE--ccC----CcEEEEEEcCCCEEEEEECC
Confidence 4788999985 689999764 334443 331 1244456 78888888654
No 55
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=25.26 E-value=1.9e+02 Score=21.01 Aligned_cols=46 Identities=24% Similarity=0.530 Sum_probs=29.6
Q ss_pred CcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCcccCCeEEE-EeCCEEEEEEeC
Q 031218 77 KEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKAS-MENGVLTVTVPK 147 (163)
Q Consensus 77 ~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~-~~~GvL~I~~pK 147 (163)
|+.|+|++++ +.++|+|.+ |...+ .|+. . .+.-. .+++.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------------------G~L~~--~~~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPR------------------GTLTK--NLKH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEE--ECTT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------eEEEE--EccC-C---cEEEEEecCCeEEEEECC
Confidence 4788999985 689999864 33444 3443 1 23444 468988888653
No 56
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=24.95 E-value=46 Score=22.76 Aligned_cols=17 Identities=35% Similarity=0.518 Sum_probs=14.7
Q ss_pred CCeEEEEeCCEEEEEEe
Q 031218 130 DRIKASMENGVLTVTVP 146 (163)
Q Consensus 130 ~~i~A~~~~GvL~I~~p 146 (163)
..+.+.+.+|||+|++.
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45788899999999995
No 57
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=24.68 E-value=57 Score=22.04 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=22.1
Q ss_pred cCCccCcCeEEEEeCCeEEEEEEEEeee
Q 031218 72 LPGLRKEEVKVEVEDDRVLQISGQRNIE 99 (163)
Q Consensus 72 lPG~~~edi~v~v~~~~~L~I~g~~~~~ 99 (163)
-|.+.+-.|.|.+++| .++++|.....
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~~ 28 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPDE 28 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESCH
T ss_pred CCcccceeEEEEEECC-EEEEEEECCCH
Confidence 4677788899999986 89999998653
No 58
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=23.79 E-value=1.3e+02 Score=22.88 Aligned_cols=43 Identities=16% Similarity=0.259 Sum_probs=27.4
Q ss_pred cCcCeEEEEeCCeEEEEEEEEeeeecCCCCcEEE-EeeeeeEEEEEEECCCC
Q 031218 76 RKEEVKVEVEDDRVLQISGQRNIEKEDKSDTWHR-VERSSGMFSRRFRLPEN 126 (163)
Q Consensus 76 ~~edi~v~v~~~~~L~I~g~~~~~~~~~~~~~~~-~e~~~g~f~r~~~LP~~ 126 (163)
.++++.| ++| .|+|++.+. .+..+.. ....+|.|+-++.||..
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~-----tsa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDST-----SGSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSS-----CCEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecC-----CCCEEEECceEeeEEEEEEEEeCCC
Confidence 4566665 566 588886542 1223332 34578999999999975
No 59
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=21.80 E-value=62 Score=23.99 Aligned_cols=47 Identities=11% Similarity=0.222 Sum_probs=24.5
Q ss_pred CcCeEEEEeC-CeEEEEEEEEeeeecCCCCcEEEE---eeeeeEEEEEEECCCC
Q 031218 77 KEEVKVEVED-DRVLQISGQRNIEKEDKSDTWHRV---ERSSGMFSRRFRLPEN 126 (163)
Q Consensus 77 ~edi~v~v~~-~~~L~I~g~~~~~~~~~~~~~~~~---e~~~g~f~r~~~LP~~ 126 (163)
++++ .+++ | .|+|++.+.....-.+.++..+ ...+|.|+-++.||..
T Consensus 49 ~~n~--~v~~~G-~L~I~~~~~~~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 49 RANS--ALDGNG-NLVITARQEADGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp TTTE--EECSSS-CEEEEEEECTTSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred ccce--EEecCC-EEEEEEEecCCCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 3454 3443 5 6888877643100001112221 1346889999999964
No 60
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=20.43 E-value=1.9e+02 Score=18.96 Aligned_cols=37 Identities=8% Similarity=0.196 Sum_probs=26.5
Q ss_pred EEECCCeEEEEEEc-CCccCcCeEEEEeCCeEEEEEEEEe
Q 031218 59 WKETPEAHVFKADL-PGLRKEEVKVEVEDDRVLQISGQRN 97 (163)
Q Consensus 59 i~e~~~~~~l~~~l-PG~~~edi~v~v~~~~~L~I~g~~~ 97 (163)
+.+.++.+.|.+.+ ||.+++.|. .+.++ .|.|+-.-.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~~-~LkV~v~Ap 45 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHGD-EVKVAITAP 45 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECSS-CEEEECCCC
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccCC-EEEEEEecC
Confidence 56777888888877 899888774 45544 788775543
No 61
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=20.30 E-value=1.7e+02 Score=26.79 Aligned_cols=95 Identities=20% Similarity=0.311 Sum_probs=54.8
Q ss_pred ccccceeEEEECCCeEEEEEEc----------CCccCcCeEEEEeCCe---EEEEEEEEeeeecCCCCcEEEEeeeeeEE
Q 031218 51 AFVNTRVDWKETPEAHVFKADL----------PGLRKEEVKVEVEDDR---VLQISGQRNIEKEDKSDTWHRVERSSGMF 117 (163)
Q Consensus 51 ~~~~p~~di~e~~~~~~l~~~l----------PG~~~edi~v~v~~~~---~L~I~g~~~~~~~~~~~~~~~~e~~~g~f 117 (163)
.+-.-.++|++.++.|++.+.+ |||+..-|+|.++.+. .=.+- ... -..+..|...=+..|.+
T Consensus 805 ~fDl~~~~v~~~~~~~~~~~~~~~~~~npw~~~gfs~q~~~iy~~~~~~g~~~~l~---~~~-~~~~~~W~~~~~~~G~~ 880 (1020)
T 1ulv_A 805 AFDLTGVDVYDAGDDYAFVATIAGEVTNPWGGQAISHQRVNIYLGKGEGGATPGLP---GTN-INLEHAWDSVIVTDGRF 880 (1020)
T ss_dssp TTCEEEEEEEEETTEEEEEEEESSCCCCTTCCSSCSSEEEEEEEECSCSSCEECSG---GGC-CEESSCEEEEEEECCST
T ss_pred ccccceeEEEEcCCEEEEEEEecccCCCCCCCCCcceeEEEEEEECCCCCCcccCC---ccc-CCCCCCccEEEEEeccC
Confidence 3444678999999999999988 6899999999998531 10010 000 11122333322223322
Q ss_pred EEE-EECCCCcccCC--eEEEEeCCEEEEEEeCcC
Q 031218 118 SRR-FRLPENAKMDR--IKASMENGVLTVTVPKAE 149 (163)
Q Consensus 118 ~r~-~~LP~~vd~~~--i~A~~~~GvL~I~~pK~~ 149 (163)
-.. +..|+.-.... |.+.-.+..++|++||..
T Consensus 881 ~~~~~~~~~g~~~~~~~v~~~~~~~~i~~~v~~~~ 915 (1020)
T 1ulv_A 881 DGAGVYAPDGTRTSAVSLLAVPEARQIVTRVPKAA 915 (1020)
T ss_dssp TCCEEECTTSCEEECCEEEEETTTTEEEEEEEGGG
T ss_pred CCcceECCCCCcCCCceEEEecCCCEEEEEEcHHH
Confidence 222 45565533333 444445889999999964
Done!