Query 031219
Match_columns 163
No_of_seqs 124 out of 1097
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 17:28:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031219.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031219hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydh_A AT5G11950; structural g 100.0 2.2E-46 7.5E-51 302.0 12.2 152 1-152 54-205 (216)
2 2a33_A Hypothetical protein; s 100.0 5.7E-46 1.9E-50 299.4 13.6 157 1-158 58-214 (215)
3 3sbx_A Putative uncharacterize 100.0 4.6E-45 1.6E-49 289.0 13.7 132 1-132 57-188 (189)
4 3qua_A Putative uncharacterize 100.0 2.1E-44 7E-49 287.3 11.8 132 1-132 66-197 (199)
5 1t35_A Hypothetical protein YV 100.0 3.3E-44 1.1E-48 284.3 10.9 138 1-138 46-183 (191)
6 1wek_A Hypothetical protein TT 100.0 5.1E-39 1.7E-43 259.1 13.3 135 1-137 81-216 (217)
7 3gh1_A Predicted nucleotide-bi 100.0 3.8E-38 1.3E-42 274.1 12.3 147 1-151 189-354 (462)
8 1weh_A Conserved hypothetical 100.0 5.6E-38 1.9E-42 244.6 8.6 124 1-133 45-170 (171)
9 3bq9_A Predicted rossmann fold 100.0 9.2E-36 3.1E-40 260.3 13.6 150 1-155 187-356 (460)
10 1rcu_A Conserved hypothetical 100.0 9.1E-33 3.1E-37 219.5 10.0 121 1-135 70-193 (195)
11 2iz6_A Molybdenum cofactor car 100.0 3E-30 1E-34 202.0 4.4 115 1-135 58-172 (176)
12 3uqz_A DNA processing protein 96.2 0.029 9.8E-07 46.5 9.5 113 3-131 149-280 (288)
13 3maj_A DNA processing chain A; 95.9 0.11 3.7E-06 44.6 12.1 114 2-133 170-303 (382)
14 2khz_A C-MYC-responsive protei 95.8 0.0047 1.6E-07 46.7 2.6 45 41-91 66-112 (165)
15 2f62_A Nucleoside 2-deoxyribos 95.7 0.017 5.7E-07 43.8 5.3 89 40-136 55-159 (161)
16 3ehd_A Uncharacterized conserv 95.6 0.024 8.1E-07 43.1 6.1 87 41-134 58-160 (162)
17 3imk_A Putative molybdenum car 95.1 0.41 1.4E-05 36.2 11.2 86 3-92 22-110 (158)
18 1f8y_A Nucleoside 2-deoxyribos 94.8 0.029 9.8E-07 42.3 4.2 46 41-92 67-116 (157)
19 4fyk_A Deoxyribonucleoside 5'- 93.5 0.09 3.1E-06 39.5 4.7 45 40-90 56-102 (152)
20 1s2d_A Purine trans deoxyribos 92.4 0.2 6.9E-06 37.9 5.2 43 41-89 70-116 (167)
21 2nx2_A Hypothetical protein YP 90.0 1.8 6E-05 33.0 8.5 85 4-90 59-169 (181)
22 2o6l_A UDP-glucuronosyltransfe 87.3 1.2 4.2E-05 31.9 5.7 63 51-134 85-151 (170)
23 3otg_A CALG1; calicheamicin, T 86.1 12 0.00041 30.1 11.8 35 46-90 302-336 (412)
24 3ufx_B Succinyl-COA synthetase 84.7 1.7 5.9E-05 37.0 6.1 82 53-154 302-385 (397)
25 2yjn_A ERYCIII, glycosyltransf 84.3 10 0.00035 31.3 10.7 77 36-134 321-400 (441)
26 2p6p_A Glycosyl transferase; X 82.4 5.9 0.0002 31.8 8.2 66 49-134 276-344 (384)
27 2iya_A OLEI, oleandomycin glyc 81.1 18 0.00061 29.5 10.9 67 48-134 317-386 (424)
28 4fzr_A SSFS6; structural genom 81.0 2.7 9.1E-05 34.2 5.7 34 47-90 295-328 (398)
29 3rsc_A CALG2; TDP, enediyne, s 78.6 11 0.00038 30.5 8.8 68 48-135 309-379 (415)
30 3ia7_A CALG4; glycosysltransfe 78.5 13 0.00045 29.6 9.1 68 48-134 293-363 (402)
31 1v4v_A UDP-N-acetylglucosamine 77.4 3.5 0.00012 33.0 5.3 66 45-135 267-332 (376)
32 1iir_A Glycosyltransferase GTF 76.8 14 0.00048 30.2 8.9 106 3-134 257-366 (415)
33 3beo_A UDP-N-acetylglucosamine 76.6 9.5 0.00032 30.1 7.6 65 45-134 275-339 (375)
34 3tsa_A SPNG, NDP-rhamnosyltran 76.3 4.5 0.00015 32.6 5.7 67 49-135 283-354 (391)
35 2iyf_A OLED, oleandomycin glyc 73.7 10 0.00035 30.9 7.3 33 48-90 295-327 (430)
36 3h4t_A Glycosyltransferase GTF 73.7 16 0.00055 29.9 8.5 67 48-134 280-349 (404)
37 1rrv_A Glycosyltransferase GTF 73.5 11 0.00036 30.9 7.3 66 49-134 299-367 (416)
38 2f9f_A First mannosyl transfer 72.9 11 0.00036 27.0 6.5 71 44-136 89-161 (177)
39 1vgv_A UDP-N-acetylglucosamine 72.0 8.5 0.00029 30.6 6.3 66 44-134 274-339 (384)
40 2jzc_A UDP-N-acetylglucosamine 71.2 3.6 0.00012 32.3 3.7 55 45-109 124-180 (224)
41 3hbm_A UDP-sugar hydrolase; PS 69.4 2.6 8.9E-05 34.1 2.6 32 48-90 221-252 (282)
42 3dzc_A UDP-N-acetylglucosamine 67.5 7.9 0.00027 32.1 5.3 74 36-134 290-364 (396)
43 2iw1_A Lipopolysaccharide core 66.0 31 0.0011 26.9 8.3 69 45-135 263-335 (374)
44 1f0k_A MURG, UDP-N-acetylgluco 62.9 28 0.00095 27.3 7.5 74 45-134 247-322 (364)
45 3oti_A CALG3; calicheamicin, T 62.2 16 0.00053 29.6 6.0 32 48-89 295-326 (398)
46 3qhp_A Type 1 capsular polysac 61.7 20 0.0007 24.7 5.9 71 43-135 65-138 (166)
47 4amg_A Snogd; transferase, pol 60.5 37 0.0013 27.0 7.9 73 3-89 259-331 (400)
48 3okp_A GDP-mannose-dependent a 58.5 25 0.00087 27.6 6.6 71 44-136 264-343 (394)
49 4hwg_A UDP-N-acetylglucosamine 57.8 42 0.0014 27.7 8.1 77 35-136 264-341 (385)
50 1nns_A L-asparaginase II; amid 57.4 24 0.00083 29.0 6.4 56 44-102 71-131 (326)
51 2hy7_A Glucuronosyltransferase 56.8 20 0.0007 29.4 5.9 87 43-150 275-366 (406)
52 3ico_A 6PGL, 6-phosphogluconol 55.0 41 0.0014 26.7 7.3 43 51-94 53-95 (268)
53 2bfw_A GLGA glycogen synthase; 54.6 25 0.00086 25.0 5.5 70 44-135 107-178 (200)
54 3tx2_A Probable 6-phosphogluco 53.1 54 0.0018 25.7 7.6 44 50-94 36-79 (251)
55 2xci_A KDO-transferase, 3-deox 53.0 28 0.00094 28.4 6.1 71 44-135 269-344 (374)
56 3ot5_A UDP-N-acetylglucosamine 49.3 32 0.0011 28.5 5.9 75 35-134 283-358 (403)
57 2jjm_A Glycosyl transferase, g 47.5 59 0.002 25.8 7.1 71 44-135 276-348 (394)
58 3s2u_A UDP-N-acetylglucosamine 47.4 7.5 0.00026 31.7 1.7 32 48-89 248-279 (365)
59 1wls_A L-asparaginase; structu 47.4 29 0.001 28.5 5.3 53 49-103 70-127 (328)
60 3oc6_A 6-phosphogluconolactona 47.1 60 0.002 25.3 7.0 44 50-94 36-79 (248)
61 2bon_A Lipid kinase; DAG kinas 46.6 16 0.00053 29.7 3.5 37 51-89 81-117 (332)
62 3lhi_A Putative 6-phosphogluco 46.1 32 0.0011 26.7 5.1 44 48-94 29-72 (232)
63 3nxk_A Cytoplasmic L-asparagin 45.6 46 0.0016 27.5 6.3 49 51-102 87-140 (334)
64 2him_A L-asparaginase 1; hydro 44.6 48 0.0017 27.6 6.3 56 45-102 94-154 (358)
65 2gek_A Phosphatidylinositol ma 44.4 57 0.0019 25.7 6.5 70 44-134 274-346 (406)
66 3c48_A Predicted glycosyltrans 44.1 63 0.0022 25.9 6.9 71 44-135 317-389 (438)
67 3nwp_A 6-phosphogluconolactona 44.0 39 0.0013 26.2 5.4 44 48-94 32-75 (233)
68 2d6f_A Glutamyl-tRNA(Gln) amid 42.2 49 0.0017 28.5 6.1 49 52-103 167-220 (435)
69 2bkx_A Glucosamine-6-phosphate 41.8 90 0.0031 23.6 7.2 41 53-94 28-70 (242)
70 3u43_A Colicin-E2 immunity pro 41.2 13 0.00046 25.4 1.9 44 90-137 29-77 (94)
71 1oi7_A Succinyl-COA synthetase 40.9 1.2E+02 0.004 24.1 7.9 87 41-134 186-286 (288)
72 3ca8_A Protein YDCF; two domai 40.6 27 0.00092 27.9 4.0 38 51-93 35-73 (266)
73 1o7j_A L-asparaginase; atomic 40.4 61 0.0021 26.6 6.2 49 52-103 85-138 (327)
74 2x0d_A WSAF; GT4 family, trans 40.4 65 0.0022 26.6 6.5 70 43-134 305-376 (413)
75 1p3y_1 MRSD protein; flavoprot 40.1 14 0.00046 28.3 2.0 88 49-136 78-185 (194)
76 1agx_A Glutaminase-asparaginas 38.7 59 0.002 26.7 5.9 49 52-103 82-135 (331)
77 2wlt_A L-asparaginase; hydrola 38.3 71 0.0024 26.2 6.3 49 52-103 85-138 (332)
78 3zqu_A Probable aromatic acid 38.0 10 0.00035 29.5 1.0 79 53-133 95-184 (209)
79 1eiw_A Hypothetical protein MT 37.7 35 0.0012 23.7 3.8 37 50-92 36-77 (111)
80 1wsa_A Asparaginase, asparagin 36.5 74 0.0025 26.1 6.2 49 52-103 83-136 (330)
81 2nu8_B SCS-beta, succinyl-COA 36.2 1.9E+02 0.0064 24.1 8.7 70 53-134 311-384 (388)
82 1zq1_A Glutamyl-tRNA(Gln) amid 36.1 79 0.0027 27.2 6.5 50 52-103 168-222 (438)
83 2icy_A Probable UTP-glucose-1- 36.0 37 0.0013 29.5 4.3 65 55-134 81-150 (469)
84 3oy2_A Glycosyltransferase B73 35.1 93 0.0032 24.7 6.5 83 37-136 256-354 (413)
85 3lp6_A Phosphoribosylaminoimid 34.7 1.2E+02 0.0041 22.9 6.5 55 42-103 47-107 (174)
86 3lwd_A 6-phosphogluconolactona 34.7 46 0.0016 25.7 4.4 43 49-94 29-71 (226)
87 2fp4_B Succinyl-COA ligase [GD 34.5 1.5E+02 0.0052 24.8 7.9 71 53-134 318-391 (395)
88 2qzs_A Glycogen synthase; glyc 32.7 1.2E+02 0.004 24.8 6.9 74 46-135 360-439 (485)
89 3fro_A GLGA glycogen synthase; 32.6 95 0.0033 24.5 6.1 71 43-135 321-393 (439)
90 3hyn_A Putative signal transdu 32.3 1.7E+02 0.0058 22.4 8.0 92 40-134 67-172 (189)
91 1jv1_A Glcnac1P uridyltransfer 31.3 51 0.0018 28.8 4.5 67 54-133 103-180 (505)
92 3tha_A Tryptophan synthase alp 30.1 63 0.0022 25.7 4.5 43 59-108 69-116 (252)
93 3ksm_A ABC-type sugar transpor 30.1 99 0.0034 22.8 5.6 37 49-90 55-92 (276)
94 1vl1_A 6PGL, 6-phosphogluconol 29.7 1.3E+02 0.0044 23.2 6.2 40 52-94 44-83 (232)
95 3g23_A Peptidase U61, LD-carbo 29.5 64 0.0022 25.7 4.5 64 40-110 51-120 (274)
96 2qtd_A Uncharacterized protein 28.8 62 0.0021 21.4 3.8 13 53-65 55-67 (105)
97 2oeg_A UTP-glucose-1-phosphate 28.1 32 0.0011 30.2 2.6 65 54-132 76-144 (505)
98 2x6q_A Trehalose-synthase TRET 27.9 2.2E+02 0.0076 22.4 7.6 68 45-135 308-377 (416)
99 3m9w_A D-xylose-binding peripl 27.2 92 0.0032 23.8 5.0 38 48-90 54-91 (313)
100 3sqn_A Conserved domain protei 26.8 15 0.0005 31.8 0.2 14 52-65 398-411 (485)
101 3n7t_A Macrophage binding prot 26.7 39 0.0013 26.4 2.7 34 56-89 108-145 (247)
102 3g1w_A Sugar ABC transporter; 26.4 1.2E+02 0.0041 22.9 5.5 37 49-90 58-94 (305)
103 3l6u_A ABC-type sugar transpor 26.3 1.2E+02 0.004 22.7 5.4 38 48-90 60-97 (293)
104 1mvl_A PPC decarboxylase athal 26.3 27 0.00091 27.0 1.6 86 49-134 93-196 (209)
105 4gdh_A DJ-1, uncharacterized p 26.0 58 0.002 24.1 3.5 34 56-89 76-114 (194)
106 3nav_A Tryptophan synthase alp 25.9 84 0.0029 25.1 4.6 46 59-108 75-125 (271)
107 1wv2_A Thiazole moeity, thiazo 25.9 42 0.0014 27.1 2.8 29 47-75 180-208 (265)
108 2i2c_A Probable inorganic poly 25.9 61 0.0021 25.4 3.8 50 53-107 36-93 (272)
109 3vnd_A TSA, tryptophan synthas 25.7 85 0.0029 24.9 4.6 44 61-108 75-123 (267)
110 1zl0_A Hypothetical protein PA 25.7 15 0.00053 30.1 0.2 66 39-111 62-133 (311)
111 1ezi_A CMP-N-acetylneuraminic 25.6 75 0.0026 23.5 4.1 57 55-133 6-63 (228)
112 1rq8_A Conserved hypothetical 25.5 62 0.0021 22.4 3.3 54 75-134 10-68 (104)
113 1n57_A Chaperone HSP31, protei 25.3 63 0.0021 25.7 3.8 33 55-89 147-185 (291)
114 3l2b_A Probable manganase-depe 25.1 1E+02 0.0035 22.9 4.8 94 35-135 122-216 (245)
115 3l49_A ABC sugar (ribose) tran 25.0 88 0.003 23.4 4.4 38 48-90 57-94 (291)
116 2v4u_A CTP synthase 2; pyrimid 24.6 52 0.0018 26.2 3.1 37 50-88 88-125 (289)
117 3rot_A ABC sugar transporter, 24.4 1.3E+02 0.0045 22.7 5.4 38 48-90 57-94 (297)
118 1v8a_A Hydroxyethylthiazole ki 24.4 35 0.0012 26.8 2.1 44 46-92 50-95 (265)
119 1rzu_A Glycogen synthase 1; gl 24.2 1.3E+02 0.0044 24.5 5.6 73 47-135 360-438 (485)
120 1vhq_A Enhancing lycopene bios 23.9 36 0.0012 26.0 2.0 10 56-65 93-102 (232)
121 3dmy_A Protein FDRA; predicted 23.9 3.3E+02 0.011 23.5 8.3 86 43-137 317-414 (480)
122 8abp_A L-arabinose-binding pro 23.8 1.2E+02 0.0041 22.8 5.1 36 49-89 54-89 (306)
123 3fij_A LIN1909 protein; 11172J 23.8 2.1E+02 0.0071 21.9 6.5 18 46-64 55-72 (254)
124 3tpf_A Otcase, ornithine carba 23.7 2.8E+02 0.0097 22.4 7.5 83 6-89 56-153 (307)
125 4hyl_A Stage II sporulation pr 23.7 1.4E+02 0.005 19.4 4.9 57 61-133 58-114 (117)
126 1m3s_A Hypothetical protein YC 23.6 1.8E+02 0.0062 20.6 5.8 38 4-64 98-135 (186)
127 3gbv_A Putative LACI-family tr 23.1 1.1E+02 0.0038 22.9 4.7 55 49-108 66-132 (304)
128 2fvy_A D-galactose-binding per 22.9 1.3E+02 0.0046 22.5 5.2 36 50-90 57-92 (309)
129 2iuy_A Avigt4, glycosyltransfe 22.6 1.2E+02 0.0042 23.2 5.0 72 44-135 223-306 (342)
130 2vk2_A YTFQ, ABC transporter p 22.5 1.4E+02 0.005 22.6 5.3 37 49-90 55-91 (306)
131 3gvp_A Adenosylhomocysteinase 22.4 78 0.0027 27.3 4.0 73 3-91 234-307 (435)
132 3n58_A Adenosylhomocysteinase; 22.4 1.2E+02 0.004 26.5 5.1 74 3-92 261-335 (464)
133 3uug_A Multiple sugar-binding 22.1 1.5E+02 0.0051 22.6 5.3 38 48-90 55-92 (330)
134 2f6u_A GGGPS, (S)-3-O-geranylg 22.1 85 0.0029 24.6 3.9 41 47-89 27-68 (234)
135 3gd5_A Otcase, ornithine carba 21.9 3.3E+02 0.011 22.3 8.1 84 6-89 68-164 (323)
136 2lnd_A De novo designed protei 21.6 1.9E+02 0.0065 19.4 6.3 62 67-135 38-99 (112)
137 2qv7_A Diacylglycerol kinase D 21.6 35 0.0012 27.5 1.6 34 53-90 81-114 (337)
138 1t1j_A Hypothetical protein; s 21.5 57 0.002 23.2 2.5 37 47-89 77-118 (125)
139 4pga_A Glutaminase-asparaginas 21.5 90 0.0031 25.8 4.1 49 52-103 90-143 (337)
140 2yv2_A Succinyl-COA synthetase 21.1 3.1E+02 0.011 21.7 7.2 88 41-134 193-294 (297)
141 2fn9_A Ribose ABC transporter, 21.1 1.6E+02 0.0053 22.0 5.2 37 49-90 55-91 (290)
142 4hcj_A THIJ/PFPI domain protei 21.1 32 0.0011 25.5 1.1 31 56-88 72-107 (177)
143 2yv1_A Succinyl-COA ligase [AD 20.8 2.6E+02 0.009 22.1 6.7 86 41-134 192-291 (294)
144 3qja_A IGPS, indole-3-glycerol 20.7 1.8E+02 0.006 23.0 5.6 65 6-89 176-242 (272)
145 1vkf_A Glycerol uptake operon 20.6 98 0.0033 23.6 3.8 36 48-88 27-62 (188)
146 1jo0_A Hypothetical protein HI 20.6 65 0.0022 21.9 2.5 52 78-135 14-70 (98)
147 1tk9_A Phosphoheptose isomeras 20.3 1.4E+02 0.0048 21.1 4.6 17 49-65 151-167 (188)
148 2ioy_A Periplasmic sugar-bindi 20.2 1.7E+02 0.0058 21.9 5.2 37 49-90 54-90 (283)
149 2h3h_A Sugar ABC transporter, 20.1 1.7E+02 0.0057 22.3 5.2 37 49-90 54-90 (313)
No 1
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=100.00 E-value=2.2e-46 Score=301.98 Aligned_cols=152 Identities=66% Similarity=1.124 Sum_probs=132.5
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCC
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI 80 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~ 80 (163)
|+|+++||+++||+||||+|+.+.++|..++.+++++++++|++||.+|+++|||||+||||+|||||+||+|||.|+|.
T Consensus 54 M~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~ 133 (216)
T 1ydh_A 54 MGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGI 133 (216)
T ss_dssp HHHHHHHHHHTTCCEEEEEEGGGHHHHCCSSCCSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHcCCcEEEEechhcCccccccCCCCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcc
Confidence 89999999999999999999998888999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHhhcCCCCCCccccceecccc
Q 031219 81 HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEEYVPKHSGVASNLSWEMEQQ 152 (163)
Q Consensus 81 ~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~~~~~~~~~~~~~~w~~~~~ 152 (163)
|+|||+++|.+|||+++++|+++|+++|||++++.+.+.+++|++|+++.|+++.+...+....++|..++.
T Consensus 134 ~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~~ 205 (216)
T 1ydh_A 134 HKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVEEL 205 (216)
T ss_dssp CCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEESSHHHHHHHHHHCC-----------------
T ss_pred cCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEeCCHHHHHHHHHHhcccccccccccccchhhc
Confidence 999999999999999999999999999999999999999999999999999998887777778899998843
No 2
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=100.00 E-value=5.7e-46 Score=299.37 Aligned_cols=157 Identities=80% Similarity=1.267 Sum_probs=123.2
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCC
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI 80 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~ 80 (163)
|+++++||+++||+||||+|..+.+.+..++.+++++++.+|++||++|+++|||||+||||+|||||+||+++|.|+|+
T Consensus 58 M~aa~~gAl~~GG~tiGVlP~~~~~~e~~~~~~~~~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~ 137 (215)
T 2a33_A 58 MGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGI 137 (215)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCC--------CCEEEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHcCCcEEEEcchHhcchhhccCCCCceeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCC
Confidence 89999999999999999999999888878888899999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHhhcCCCCCCccccceecccccccccc
Q 031219 81 HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEEYVPKHSGVASNLSWEMEQQLGYTNK 158 (163)
Q Consensus 81 ~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~ 158 (163)
|+|||+++|.+|||++|++|+++|+++|||++++.+.+.+++|++|+++.|+++.++......+++|..+ ++||++.
T Consensus 138 ~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~ 214 (215)
T 2a33_A 138 HDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEME-RIGYSSE 214 (215)
T ss_dssp CCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEESSHHHHHHHHHC-------------------------
T ss_pred CCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEeCCHHHHHHHHHHhcCcccccccccccccc-ccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998877777889999998 7799864
No 3
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=100.00 E-value=4.6e-45 Score=289.03 Aligned_cols=132 Identities=35% Similarity=0.567 Sum_probs=128.8
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCC
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI 80 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~ 80 (163)
|+|+++||+++||+||||+|..+..+|.+|+++++++++++|++||.+|+++|||||+||||+|||||+||+|||.|+|+
T Consensus 57 M~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~ 136 (189)
T 3sbx_A 57 MGAVSSAARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGM 136 (189)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTTTTTTTBCTTCSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCcEEEEcCchhhhcccCCCCCCeeEEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcc
Confidence 89999999999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHH
Q 031219 81 HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLE 132 (163)
Q Consensus 81 ~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~ 132 (163)
|+|||+|+|.+|||+++++|+++|+++|||++++.+.+.+++|++|++++|+
T Consensus 137 ~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 137 HDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDALQACA 188 (189)
T ss_dssp CCCCEEEECTTCTTHHHHHHHHHHHHTTSSCHHHHHHEEEESSHHHHHHHHC
T ss_pred cCCCEEEecCCccchHHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999874
No 4
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=100.00 E-value=2.1e-44 Score=287.31 Aligned_cols=132 Identities=40% Similarity=0.624 Sum_probs=129.0
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCC
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI 80 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~ 80 (163)
|+++++||+++||+||||+|+.+..+|.+|+.+++++++++|++||.+|+++|||||+||||+|||||+||+|+|.|+|+
T Consensus 66 M~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~ 145 (199)
T 3qua_A 66 MGAVAQAARAKGGHTVGVIPKALVHRELADVDAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGM 145 (199)
T ss_dssp HHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTTSSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCcEEEEeCchhhhccccCCCCCeeEEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhcc
Confidence 89999999999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHH
Q 031219 81 HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLE 132 (163)
Q Consensus 81 ~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~ 132 (163)
|+|||+|+|.+|||+++++|+++|+++|||++++.+.+.+++|++|+++.|+
T Consensus 146 ~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~~~e~~~~l~ 197 (199)
T 3qua_A 146 HDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQRAMDSLVVVDNVEAALEACA 197 (199)
T ss_dssp CCCCEEEECTTSTTHHHHHHHHHTTTTTSSCHHHHHTSEEESSHHHHHHHHS
T ss_pred CCCCEEEEcCCccchHHHHHHHHHHHCCCCCHHHCCeEEEeCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999985
No 5
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=100.00 E-value=3.3e-44 Score=284.26 Aligned_cols=138 Identities=40% Similarity=0.794 Sum_probs=130.9
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCC
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI 80 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~ 80 (163)
|+++++||+++||+||||+|+.+.+++.+++.+++++++.+|++||++|++.|||||+||||+|||||+||+|+|.|+|+
T Consensus 46 M~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~ 125 (191)
T 1t35_A 46 MGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGI 125 (191)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEEEEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSS
T ss_pred HHHHHHHHHHcCCeEEEEeCchhcccccccCCCCccccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999888888889999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHhhcCCC
Q 031219 81 HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEEYVPKH 138 (163)
Q Consensus 81 ~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~~~~~~ 138 (163)
|+|||+++|.+|||+++++|+++|+++||+++++.+.+.+++|++|+++.|+++.++.
T Consensus 126 ~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~~~~~~~~~~~e~~~~l~~~~~~~ 183 (191)
T 1t35_A 126 HQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQMQNYSYPI 183 (191)
T ss_dssp CCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHHHHEEEESSHHHHHHHHHTC----
T ss_pred CCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999999999999987653
No 6
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=5.1e-39 Score=259.13 Aligned_cols=135 Identities=27% Similarity=0.409 Sum_probs=122.0
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCC
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI 80 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~ 80 (163)
|+++++||+++||+||||+|. +...+.+++.+++.+.+.+|++||++|.+.|||||++|||+|||||+||+|+|.|+|.
T Consensus 81 M~aa~~gAl~~gG~~iGV~~~-~P~~~~~~~~~t~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~ 159 (217)
T 1wek_A 81 MEAVNRGAYEAGGVSVGLNIE-LPHEQKPNPYQTHALSLRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEK 159 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEEEC-CTTCCCCCSCCSEEEEESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCCEEEEeeC-CcchhhccccCCcCcccCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCC
Confidence 899999999999999999664 2234556777888889999999999999999999999999999999999999999997
Q ss_pred -CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHhhcCC
Q 031219 81 -HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEEYVPK 137 (163)
Q Consensus 81 -~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~~~~~ 137 (163)
|+|||+++|. +||+++++|+++|+++||+++++.+.+.+++|++|+++.|++++++
T Consensus 160 ~~~kPvvll~~-~~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~~~~~e~~~~l~~~~~~ 216 (217)
T 1wek_A 160 VHRFPVFLLDR-GYWEGLVRWLAFLRDQKAVGPEDLQLFRLTDEPEEVVQALKAEAPP 216 (217)
T ss_dssp SCCCCEEEECH-HHHHHHHHHHHHHHHTTSSCTTGGGGSEEESCHHHHHHHHHC----
T ss_pred CCCCCEEEeCc-ccchhHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHHHHhcCC
Confidence 6799999998 6999999999999999999999999999999999999999987654
No 7
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=100.00 E-value=3.8e-38 Score=274.12 Aligned_cols=147 Identities=22% Similarity=0.341 Sum_probs=131.6
Q ss_pred ChHHHHHHHhC-------CCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHH
Q 031219 1 MGLVSQAVYDG-------GRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVI 73 (163)
Q Consensus 1 Mgava~ga~~~-------GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~ 73 (163)
|+++++||..+ ||+||||+|..+..+|.+|+.+++++++++|++||.+|++.|||||+||||+|||||+||+|
T Consensus 189 MeAa~aGA~~a~a~qr~aGG~vIGIiP~~L~~~E~~N~~vteliiv~~m~~RK~~mv~~SDAfIaLPGG~GTLEELfE~L 268 (462)
T 3gh1_A 189 MEGPMKGAAVGHAKQRYSEYRYLGLTEPSIIAAEPPNPIVNELVIMPDIEKRLEAFVRMAHGIIIFPGGPGTAEELLYIL 268 (462)
T ss_dssp GTHHHHHHHHHHHHTTCTTCCEEEEECTTTTTTSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCCeEEEEccchhhhhhccCCCCCeeEEeCCHHHHHHHHHHHCCEEEEcCCCcchHHHHHHHH
Confidence 88888888775 99999999999888888999999999999999999999999999999999999999999999
Q ss_pred HHHHcC---CCCCcEEEEec---CCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHhhcC------CCCCC
Q 031219 74 TWAQLG---IHDKPVGLLNV---DGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEEYVP------KHSGV 141 (163)
Q Consensus 74 ~~~qlg---~~~kPivlln~---~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~~~~------~~~~~ 141 (163)
+|.|++ .|+|||+|+|+ +|||++|++|+++++.++. ....+.+++|++|+++.|+++.+ ....+
T Consensus 269 Tw~qLgtgk~h~kPIVLln~~~~~gYwd~Ll~fL~~~v~eg~----~~~~~iv~DdpeEvl~~i~~~~~~v~~~r~~~~d 344 (462)
T 3gh1_A 269 GIMMHPENADQPMPIVLTGPKQSEAYFRSLDKFITDTLGEAA----RKHYSIAIDNPAEAARIMSNAMPLVRQHRKDKED 344 (462)
T ss_dssp HHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHHCGGG----GGGCEEEESCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcccCcCCCCCEEEEcCCCcccHHHHHHHHHHHHhhhhh----hhccEEEcCCHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999988 78999999998 8999999999999987763 45667899999999999987643 23557
Q ss_pred ccccceeccc
Q 031219 142 ASNLSWEMEQ 151 (163)
Q Consensus 142 ~~~~~w~~~~ 151 (163)
+|++||+..-
T Consensus 345 ay~fnw~l~i 354 (462)
T 3gh1_A 345 AYSFNWSLKI 354 (462)
T ss_dssp CSSSCCSSCC
T ss_pred ceeeeeeecc
Confidence 8999999863
No 8
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=5.6e-38 Score=244.57 Aligned_cols=124 Identities=25% Similarity=0.333 Sum_probs=116.3
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCc-ccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcC
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPRE-ITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLG 79 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e-~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg 79 (163)
|+++++||+++||+||||+|+.+.+.| .+|+.+++.+++.+|++||++|.+.||+||++|||+|||||+||+|+|.|+|
T Consensus 45 M~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~~~~~~~~~f~~Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g 124 (171)
T 1weh_A 45 MEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVDLELPAATLPQRIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLR 124 (171)
T ss_dssp HHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCSEECCCSSHHHHHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCcEEEEeccccCcccccccCCCceeeecCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhC
Confidence 899999999999999999999777766 5677788888899999999999999999999999999999999999999999
Q ss_pred C-CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHh
Q 031219 80 I-HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEE 133 (163)
Q Consensus 80 ~-~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~ 133 (163)
+ |+|| +++| |||++++ +++||+++++.+.+.+++|++|+++.|++
T Consensus 125 ~~~~kP-vll~--g~~~~l~------~~~gfi~~~~~~~~~~~~~~~e~~~~l~~ 170 (171)
T 1weh_A 125 RGVGRP-LAVD--PYWLGLL------KAHGEIAPEDVGLLRVVADEEDLRRFLRS 170 (171)
T ss_dssp SSCSCC-EEEC--GGGGGTC------CCBTTBCHHHHTTSEECCSHHHHHHHHHT
T ss_pred ccCCCe-EEEC--cchhhhH------hhcCCCChhhcCeEEEeCCHHHHHHHHHh
Confidence 8 6899 9998 8999987 88999999999999999999999999875
No 9
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=100.00 E-value=9.2e-36 Score=260.29 Aligned_cols=150 Identities=21% Similarity=0.325 Sum_probs=128.6
Q ss_pred Ch-HHHHHHHh------CCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHH
Q 031219 1 MG-LVSQAVYD------GGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVI 73 (163)
Q Consensus 1 Mg-ava~ga~~------~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~ 73 (163)
|+ +++.++.+ +||+||||+|.++.++|.+|+.+++++++++|++||.+|++.|||||+||||+|||||+||+|
T Consensus 187 MEaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~~E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaL 266 (460)
T 3bq9_A 187 MKGPMKGATIGHAKQRVEGGRYLGLTEPGIIAAEPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLL 266 (460)
T ss_dssp GTHHHHHHHHHHHHTTCSSCCEEEEECTTTTTTSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHH
T ss_pred hhHHHhhHHhhcccccCCCCEEEEEeChhhhhhhhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHH
Confidence 74 45555555 599999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCC---CCCcEEEEe---cCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHhh-------cCCCCC
Q 031219 74 TWAQLGI---HDKPVGLLN---VDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEEY-------VPKHSG 140 (163)
Q Consensus 74 ~~~qlg~---~~kPivlln---~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~~-------~~~~~~ 140 (163)
+|.|++. |+|||+++| ++|||+++++|+++++.+ ++....+.+++|++|+++.++++ +. ...
T Consensus 267 T~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~l~~~l~~----~~~~~~iiv~ddpeEal~~l~~~~~~v~~~y~-~~~ 341 (460)
T 3bq9_A 267 GILMHPDNQRQSLPVILTGPASSRDYFEALDEFIGATIGD----EARQLYKIIIDDPAAVAQHMHAGMAAVKQYRR-DSG 341 (460)
T ss_dssp HHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHTCT----TGGGGCEEEESCHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred HHHhhccccCCCCCEEEEecCCccchhhHHHHHHHHHhcc----hhhcCcEEEeCCHHHHHHHHHHHHHHHHHHhc-ccC
Confidence 9999986 899999997 589999999999998766 44555678999999999998663 22 234
Q ss_pred Cccccceeccccccc
Q 031219 141 VASNLSWEMEQQLGY 155 (163)
Q Consensus 141 ~~~~~~w~~~~~~~~ 155 (163)
..++|||+..-.+.+
T Consensus 342 ~ry~~nW~l~i~~~~ 356 (460)
T 3bq9_A 342 DAYYFNWTLKINEEF 356 (460)
T ss_dssp CCSSSCCSCCCCGGG
T ss_pred ceeeeccccccChhh
Confidence 788999998755554
No 10
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=99.98 E-value=9.1e-33 Score=219.47 Aligned_cols=121 Identities=27% Similarity=0.387 Sum_probs=108.5
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEec--CCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHc
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAV--SGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQL 78 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~--~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~ql 78 (163)
|+++++||+++||+||||+|.. ...+.+.+++++ .+|++||++|++.|||||++|||+|||+|++++|+
T Consensus 70 M~aa~~gAl~~GG~~iGVlP~e-----~~~~~~~~~~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~---- 140 (195)
T 1rcu_A 70 MELVSQGVREAGGTVVGILPDE-----EAGNPYLSVAVKTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYA---- 140 (195)
T ss_dssp HHHHHHHHHHTTCCEEEEESTT-----CCCCTTCSEEEECCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHcCCcEEEEeCCc-----ccCCCCcceeeecCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHh----
Confidence 8999999999999999999983 223455777665 69999999999999999999999999999999997
Q ss_pred CCCCCcEEEEecCCcchHHHHHHHHHHHcC-CCCccccccEEEeCCHHHHHHHHHhhc
Q 031219 79 GIHDKPVGLLNVDGYYNSLLSFIDKAVDEG-FIAPAARYIIVSAQTAHELICKLEEYV 135 (163)
Q Consensus 79 g~~~kPivlln~~Gfw~~l~~~l~~~~~~g-fi~~~~~~~i~~~~~~ee~~~~l~~~~ 135 (163)
++|||+++|.+|||++++ +.++++| |+++++.+.+.+++|++|+++.|+++.
T Consensus 141 --~~kPV~lln~~g~w~~~l---~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l~~~~ 193 (195)
T 1rcu_A 141 --LGKPVILLRGTGGWTDRI---SQVLIDGKYLDNRRIVEIHQAWTVEEAVQIIEQIL 193 (195)
T ss_dssp --TTCCEEEETTSCHHHHHG---GGGCBTTTBSSTTCCSCEEEESSHHHHHHHHHTC-
T ss_pred --cCCCEEEECCCCccHHHH---HHHHHcCCcCCHHHcCeEEEeCCHHHHHHHHHHHh
Confidence 489999999999999874 6888999 999999999999999999999998764
No 11
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=99.96 E-value=3e-30 Score=202.04 Aligned_cols=115 Identities=20% Similarity=0.218 Sum_probs=102.4
Q ss_pred ChHHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCC
Q 031219 1 MGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI 80 (163)
Q Consensus 1 Mgava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~ 80 (163)
|++++++|+++||+||||+|.. .++.+++.+++++++.+|++||++|.+.||+||++|||+|||+|++++| .
T Consensus 58 m~aa~~gAl~~gG~tigVlP~~--~~~~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al------~ 129 (176)
T 2iz6_A 58 MHEAMKGAKEAGGTTIGVLPGP--DTSEISDAVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALAL------K 129 (176)
T ss_dssp HHHHHHHHHHTTCCEEEEECC-------CCTTCSEEEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHH------H
T ss_pred hHHHHHHHHHcCCEEEEEeCch--hhhhhccCCceeEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHH------H
Confidence 8999999999999999999987 4567788889999999999999999999999999999999999999999 3
Q ss_pred CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHhhc
Q 031219 81 HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEEYV 135 (163)
Q Consensus 81 ~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~~~ 135 (163)
++|||+++|. |+ +++||+++++.+.+.+++|++|+++.|+++.
T Consensus 130 ~~kpV~~l~~---~~---------~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 130 AKKPVVLLGT---QP---------EAEKFFTSLDAGLVHVAADVAGAIAAVKQLL 172 (176)
T ss_dssp TTCCEEEESC---CH---------HHHHHHHHHCTTTEEEESSHHHHHHHHHHHH
T ss_pred hCCcEEEEcC---cc---------cccccCChhhcCeEEEcCCHHHHHHHHHHHH
Confidence 6999999985 76 5567888899999999999999999999875
No 12
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=96.22 E-value=0.029 Score=46.46 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=74.4
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCCccc-CCCcc------eEE----------ecCCHHHHHHHHHHhcCEEEEccCC--C
Q 031219 3 LVSQAVYDGGRHVLGVIPKTLMPREIT-GDTVG------EVK----------AVSGMHQRKAEMARQADAFIALPGG--Y 63 (163)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e~~-~~~~~------~li----------~~~~m~~Rk~~m~~~sDafIalPGG--~ 63 (163)
++-++|+++||++|+|++..+...=+. |..+- -++ ....|..|++++.-.||+.||.--+ -
T Consensus 149 ~AH~~aL~~~g~TIaVl~~Gld~~YP~~n~~L~~~i~~~GlliSE~ppg~~p~~~~Fp~RNRiIagLS~~~vVvEA~~~S 228 (288)
T 3uqz_A 149 AAHMAALQNGGKTIAVIGTGLDVFYPKANKRLQDYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRS 228 (288)
T ss_dssp HHHHHHHHHTCCEEEECSSCTTCCSSGGGHHHHHHHHHHSEEEESSCTTCCCCTTHHHHHHHHHHHHCSEEEEESCCTTC
T ss_pred HHHHHHHhcCCCEEEEecccccccCchhhHHHHHHhcccCcEeeccCCCCCccccccHHHHHHHHHcCCeEEEEecCCCC
Confidence 456789999999999999987421111 11110 011 1347899999999999999998765 6
Q ss_pred CCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHH
Q 031219 64 GTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKL 131 (163)
Q Consensus 64 GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l 131 (163)
|||.=.-.++.. .|||..+-. ...++.-+--..++.+| -..+.+++|+++.+
T Consensus 229 GsliTA~~Ale~------gR~VfavPG-~i~~~~s~G~n~LI~~G---------A~lv~~~~Dil~el 280 (288)
T 3uqz_A 229 GSLITCERAMEE------GRDVFAIPG-SILDGLSDGCHHLIQEG---------AKLVTSGQDVLAEF 280 (288)
T ss_dssp HHHHHHHHHHHT------TCEEEECCC-CSSSSTTHHHHHHHHTT---------CEECSSHHHHHHHC
T ss_pred hHHHHHHHHHHc------CCeEEEECC-CCCCccchHHHHHHHCC---------CEEECCHHHHHHHh
Confidence 776655555543 889987742 23344334445566665 24568899988766
No 13
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=95.95 E-value=0.11 Score=44.60 Aligned_cols=114 Identities=9% Similarity=0.058 Sum_probs=78.6
Q ss_pred hHHHHHHHhCCCeEEEEeCCCCCC---Cccc--CCCc---ceEEec----------CCHHHHHHHHHHhcCEEEEccCC-
Q 031219 2 GLVSQAVYDGGRHVLGVIPKTLMP---REIT--GDTV---GEVKAV----------SGMHQRKAEMARQADAFIALPGG- 62 (163)
Q Consensus 2 gava~ga~~~GG~viGIiP~~~~~---~e~~--~~~~---~~li~~----------~~m~~Rk~~m~~~sDafIalPGG- 62 (163)
.++-++|+++| +|+|++..+.. .+.. ...+ .-+++. .+|..|++++.-.|+++||.-.+
T Consensus 170 ~~AH~~AL~~g--TIaVLg~Gld~~YP~~n~~L~~~I~~~~G~liSE~ppg~~p~~~~Fp~RNRiIagLS~~vvVvEA~~ 247 (382)
T 3maj_A 170 QAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAY 247 (382)
T ss_dssp HHHHHHHTTTC--EEEECSSCTTSCSSGGGHHHHHHHHHTTCEEEECSCTTCCCCTTHHHHHHHHHHHHCSCEEECCCCT
T ss_pred HHHHHHHHhCC--eEEEECCCcCccCCHhhHHHHHHHHHhCCcEEecCCCCCCCCccccHHHHHHHHHhCCceEEEecCC
Confidence 45678888877 99999987632 2110 0001 112222 36899999999999999998777
Q ss_pred -CCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHh
Q 031219 63 -YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEE 133 (163)
Q Consensus 63 -~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~ 133 (163)
-|||...-.++.. +|||+.+-. ...++.-.--..++.+| -..+.+++++++.+..
T Consensus 248 kSGsliTA~~Ale~------gR~VfavPG-~i~~~~s~G~n~LI~~G---------A~lv~~~~Dil~~l~~ 303 (382)
T 3maj_A 248 RSGSLITARRAADQ------GREVFAVPG-SPLDPRAAGTNDLIKQG---------ATLITSASDIVEAVAS 303 (382)
T ss_dssp TCTHHHHHHHHHHH------TCCEEECCC-CTTCGGGHHHHHHHHTT---------CEECSSHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHh------CCcEEEEcC-CCCCcccccHHHHHHCC---------CEEECCHHHHHHHhhh
Confidence 7999999888865 899988743 24444444455677665 2467889999888853
No 14
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=95.77 E-value=0.0047 Score=46.73 Aligned_cols=45 Identities=24% Similarity=0.214 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHhcCEEEEccC--CCCCHHHHHHHHHHHHcCCCCCcEEEEecC
Q 031219 41 GMHQRKAEMARQADAFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLLNVD 91 (163)
Q Consensus 41 ~m~~Rk~~m~~~sDafIalPG--G~GTLdEl~e~~~~~qlg~~~kPivlln~~ 91 (163)
...+|...+++.||++|++++ ..||.-|+..+..+ +|||+++..+
T Consensus 66 ~i~~~d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~al------gKPVi~l~~~ 112 (165)
T 2khz_A 66 FIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVAL------GKPILCLFRP 112 (165)
T ss_dssp HHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHT------CSSEEEEECT
T ss_pred HHHHHHHHHHHhCCEEEEECCCCCCCHHHHHHHHHHC------CCEEEEEEcC
Confidence 347888899999999999975 67999999999876 9999999654
No 15
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=95.66 E-value=0.017 Score=43.81 Aligned_cols=89 Identities=17% Similarity=0.120 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHhcCEEEEc--c-----CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHH-HcCCCC
Q 031219 40 SGMHQRKAEMARQADAFIAL--P-----GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAV-DEGFIA 111 (163)
Q Consensus 40 ~~m~~Rk~~m~~~sDafIal--P-----GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~-~~gfi~ 111 (163)
...+++...+++.||++|+. | =-.||.-|+..++.+ +|||+++..+ + .++.+...... .+|+.-
T Consensus 55 ~~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~Al------gKPVi~l~~d-~-r~~~~~~~~~~d~~g~~v 126 (161)
T 2f62_A 55 LDIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAAL------NKMVLTFTSD-R-RNMREKYGSGVDKDNLRV 126 (161)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHT------TCEEEEECSC-C-SCHHHHHTSSBCTTSCBC
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHC------CCEEEEEEcC-c-hhhhhhcccccccccccc
Confidence 35577888999999999999 4 357999999999976 9999998654 2 22222111000 011100
Q ss_pred cc--------ccccEEEeCCHHHHHHHHHhhcC
Q 031219 112 PA--------ARYIIVSAQTAHELICKLEEYVP 136 (163)
Q Consensus 112 ~~--------~~~~i~~~~~~ee~~~~l~~~~~ 136 (163)
++ -...+.+.++.+++++.|.+...
T Consensus 127 edf~~~~NLMl~~~~~~~~~~~~~l~~l~~~~~ 159 (161)
T 2f62_A 127 EGFGLPFNLMLYDGVEVFDSFESAFKYFLANFP 159 (161)
T ss_dssp CCSSCSSCGGGCCSSCEESSHHHHHHHHHHHSC
T ss_pred cccCCcchhhhhhhheeeCCHHHHHHHHHHhhc
Confidence 00 01112278999999999987643
No 16
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=95.63 E-value=0.024 Score=43.10 Aligned_cols=87 Identities=16% Similarity=0.114 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHhcCEEEEc-cCC---CCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchH---HHHHHHHHH---HcCCC
Q 031219 41 GMHQRKAEMARQADAFIAL-PGG---YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNS---LLSFIDKAV---DEGFI 110 (163)
Q Consensus 41 ~m~~Rk~~m~~~sDafIal-PGG---~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~---l~~~l~~~~---~~gfi 110 (163)
..+++....++.||++|++ .|. .||.-|+..++.+ +|||+++..+ +.+. -.+-+..+. +..|.
T Consensus 58 ~i~~~D~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~------gkPVi~~~~D-~R~~g~~~~~~~~~~~~~~e~~f~ 130 (162)
T 3ehd_A 58 MIALADTENVLASDLLVALLDGPTIDAGVASEIGVAYAK------GIPVVALYTD-SRQQGADNHQKLDALNEIAENQFH 130 (162)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSSCCHHHHHHHHHHHHT------TCCEEEECCC-GGGCCTTCHHHHHHTTSTTCCCSC
T ss_pred HHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHC------CCEEEEEEcC-cccccCCcchhhhhhHHHhhhhhh
Confidence 4688888899999998886 554 8999999999975 8999999654 2220 001011111 11110
Q ss_pred Ccc------ccccEEEeCCHHHHHHHHHhh
Q 031219 111 APA------ARYIIVSAQTAHELICKLEEY 134 (163)
Q Consensus 111 ~~~------~~~~i~~~~~~ee~~~~l~~~ 134 (163)
.-. -...=.++.+.+|+++.|+++
T Consensus 131 ~~N~~~~G~i~~~g~~~~~~~~~~~~l~~~ 160 (162)
T 3ehd_A 131 YLNLYTVGLIKLNGRVVSSEEDLLEEIKQR 160 (162)
T ss_dssp CCCHHHHHHHHTTEEEESSHHHHHHHHHHT
T ss_pred hhhHHHhhhHHhCCeEEeCHHHHHHHHHHH
Confidence 000 001236779999999999876
No 17
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=95.08 E-value=0.41 Score=36.21 Aligned_cols=86 Identities=15% Similarity=0.098 Sum_probs=59.3
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCCc-ccCCCcc-eEEecCCHHHHHHHHHHhcCEEEEcc-CCCCCHHHHHHHHHHHHcC
Q 031219 3 LVSQAVYDGGRHVLGVIPKTLMPRE-ITGDTVG-EVKAVSGMHQRKAEMARQADAFIALP-GGYGTLEELLEVITWAQLG 79 (163)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e-~~~~~~~-~li~~~~m~~Rk~~m~~~sDafIalP-GG~GTLdEl~e~~~~~qlg 79 (163)
|+-+.|+++|=..-|..|....... .-...|. ......++..|....++.||+-++|- |..-.=.++...++.
T Consensus 22 aALd~A~~~gi~~gGwcP~GR~aEDG~ip~~Y~L~E~~~~~y~~Rt~~NV~DSDgTLI~~~g~lsGGT~lT~~~a~---- 97 (158)
T 3imk_A 22 AALDFAIKHHIPYGGWVPKGRLAEGGRVPETYQLQEMPTSDYSKRTEKNVLDSDGTLIISHGILKGGSALTEFFAE---- 97 (158)
T ss_dssp HHHHHHHHTTCCEECEECGGGCCTTSSCCTTSCCEECSSCCHHHHHHHHHHTSSEEEEEESSSCCHHHHHHHHHHH----
T ss_pred HHHHHHHHcCCCcceecCCCcccccCCCCccccccccCCCCHHHHHHHhhhhcCeEEEEecCCCCCchHHHHHHHH----
Confidence 5567888999888999998765432 2223332 12235789999999999999966665 766433344444443
Q ss_pred CCCCcEEEEecCC
Q 031219 80 IHDKPVGLLNVDG 92 (163)
Q Consensus 80 ~~~kPivlln~~G 92 (163)
.|.||+.+++.+.
T Consensus 98 ~~~KP~l~i~l~~ 110 (158)
T 3imk_A 98 QYKKPCLHIDLDR 110 (158)
T ss_dssp HTTCCEEEEETTT
T ss_pred HhCCCEEEEeccc
Confidence 5799999998764
No 18
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=94.77 E-value=0.029 Score=42.27 Aligned_cols=46 Identities=17% Similarity=0.022 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHhcCEEEEccCC----CCCHHHHHHHHHHHHcCCCCCcEEEEecCC
Q 031219 41 GMHQRKAEMARQADAFIALPGG----YGTLEELLEVITWAQLGIHDKPVGLLNVDG 92 (163)
Q Consensus 41 ~m~~Rk~~m~~~sDafIalPGG----~GTLdEl~e~~~~~qlg~~~kPivlln~~G 92 (163)
..+++....++.||++|++.-| .||.-|+..++.+ +|||+++..+.
T Consensus 67 ~I~~~D~~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~------gkPVv~~~~~~ 116 (157)
T 1f8y_A 67 ATYNNDLNGIKTNDIMLGVYIPDEEDVGLGMELGYALSQ------GKYVLLVIPDE 116 (157)
T ss_dssp HHHHHHHHHHHTSSEEEEECCGGGCCHHHHHHHHHHHHT------TCEEEEEECGG
T ss_pred HHHHHhHHHHHhCCEEEEEcCCCCCCccHHHHHHHHHHC------CCeEEEEEcCC
Confidence 3478888899999999998755 8999999999976 99999997653
No 19
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=93.53 E-value=0.09 Score=39.54 Aligned_cols=45 Identities=24% Similarity=0.223 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHhcCEEEEccC--CCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 40 SGMHQRKAEMARQADAFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 40 ~~m~~Rk~~m~~~sDafIalPG--G~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
...++|...+++.||++|+..- ..||.-|+..+..+ +|||+++..
T Consensus 56 ~~i~~~d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~al------gkPV~~l~~ 102 (152)
T 4fyk_A 56 QFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVAL------GKPILCLFR 102 (152)
T ss_dssp HHHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred HHHHHHHHHHHHHCCEEEEeCCCCCCCHHHHHHHHHHc------CCeEEEEEe
Confidence 3468999999999999999743 68999999999976 899999754
No 20
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=92.37 E-value=0.2 Score=37.93 Aligned_cols=43 Identities=19% Similarity=0.026 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHhcCEEEEc----cCCCCCHHHHHHHHHHHHcCCCCCcEEEEe
Q 031219 41 GMHQRKAEMARQADAFIAL----PGGYGTLEELLEVITWAQLGIHDKPVGLLN 89 (163)
Q Consensus 41 ~m~~Rk~~m~~~sDafIal----PGG~GTLdEl~e~~~~~qlg~~~kPivlln 89 (163)
..+++....++.||++|++ .=-.||.-|+..++.+ +|||+++.
T Consensus 70 ~I~~~D~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~al------gKPVv~l~ 116 (167)
T 1s2d_A 70 ATYQNDLTGISNATCGVFLYDMDQLDDGSAFXIGFMRAM------HKPVILVP 116 (167)
T ss_dssp HHHHHHHHHHHHCSEEEEEEESSSCCHHHHHHHHHHHHT------TCCEEEEE
T ss_pred HHHHHHHHHHHhCCEEEEECCCCCCCCCceeehhhHhhC------CCeEEEEE
Confidence 3477888899999999996 3468999999999976 89999996
No 21
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=90.00 E-value=1.8 Score=32.99 Aligned_cols=85 Identities=12% Similarity=0.107 Sum_probs=51.5
Q ss_pred HHHHHHh-----CCCeEEEEeCCCCCCCcccC----------CCcceEEecC--------CHHHHHHHHHHhcCEEEEcc
Q 031219 4 VSQAVYD-----GGRHVLGVIPKTLMPREITG----------DTVGEVKAVS--------GMHQRKAEMARQADAFIALP 60 (163)
Q Consensus 4 va~ga~~-----~GG~viGIiP~~~~~~e~~~----------~~~~~li~~~--------~m~~Rk~~m~~~sDafIalP 60 (163)
+|+.|++ .+.+.+-|+|-.-.+..... ..++....+. -+..|++.|+++||..|++-
T Consensus 59 aae~vl~lk~~y~~i~L~~v~Pf~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~~y~~~~~~~~rn~~mvd~sD~liavy 138 (181)
T 2nx2_A 59 AAEAAYDLQEEYPDLKVAVITPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQKNQFFIDKSDGLLLLY 138 (181)
T ss_dssp HHHHHHTTTTTCTTCEEEEEESSBCTTTTSCHHHHHHHHHHHHHCSEEEESSSSBCCCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHHHHhccccCCceEEEEecccchhhCCCHHHHHHHHHHHHhCCeEEecccCCCCCHHHHHHHHHHHHHHCCEEEEEE
Confidence 5677777 57899999995543321100 0111222111 26799999999999998887
Q ss_pred -CCC--CCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 61 -GGY--GTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 61 -GG~--GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
|.. ||-.=+-.+-...+ .+++|+.+++.
T Consensus 139 Dg~~~GgT~~~v~~A~~~~~--~~~~pv~~I~~ 169 (181)
T 2nx2_A 139 DPEKEGSPKYMLGTAEKRRE--QDGYPIYFITM 169 (181)
T ss_dssp CTTTCCTTHHHHHHHHHHHH--HHCCCEEEECH
T ss_pred cCCCCCCHHHHHHHHHHhcc--ccCCeEEEEcH
Confidence 543 66544443333211 34799999863
No 22
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=87.31 E-value=1.2 Score=31.91 Aligned_cols=63 Identities=21% Similarity=0.324 Sum_probs=38.0
Q ss_pred HhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeC----CHHH
Q 031219 51 RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQ----TAHE 126 (163)
Q Consensus 51 ~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~----~~ee 126 (163)
..||+||- .||.||+-|.. . +.+|++++.. +.+. ....+.+.+.|. -..++ ++++
T Consensus 85 ~~ad~~I~-~~G~~t~~Ea~---~------~G~P~i~~p~--~~~Q-~~na~~l~~~g~--------g~~~~~~~~~~~~ 143 (170)
T 2o6l_A 85 PKTRAFIT-HGGANGIYEAI---Y------HGIPMVGIPL--FADQ-PDNIAHMKARGA--------AVRVDFNTMSSTD 143 (170)
T ss_dssp TTEEEEEE-CCCHHHHHHHH---H------HTCCEEECCC--STTH-HHHHHHHHTTTS--------EEECCTTTCCHHH
T ss_pred CCcCEEEE-cCCccHHHHHH---H------cCCCEEeccc--hhhH-HHHHHHHHHcCC--------eEEeccccCCHHH
Confidence 67887775 78889988765 2 2899999864 2332 222334443331 12222 7788
Q ss_pred HHHHHHhh
Q 031219 127 LICKLEEY 134 (163)
Q Consensus 127 ~~~~l~~~ 134 (163)
+.+.|.+.
T Consensus 144 l~~~i~~l 151 (170)
T 2o6l_A 144 LLNALKRV 151 (170)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87777665
No 23
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=86.11 E-value=12 Score=30.11 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=25.5
Q ss_pred HHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 46 KAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 46 k~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
...++..||+|| .+||.+|+-|. +.. .+|+|++..
T Consensus 302 ~~~~l~~ad~~v-~~~g~~t~~Ea---~a~------G~P~v~~p~ 336 (412)
T 3otg_A 302 QAALLPHVDLVV-HHGGSGTTLGA---LGA------GVPQLSFPW 336 (412)
T ss_dssp HHHHGGGCSEEE-ESCCHHHHHHH---HHH------TCCEEECCC
T ss_pred HHHHHhcCcEEE-ECCchHHHHHH---HHh------CCCEEecCC
Confidence 445778899877 78888886554 443 899999754
No 24
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=84.74 E-value=1.7 Score=36.96 Aligned_cols=82 Identities=15% Similarity=0.014 Sum_probs=47.7
Q ss_pred cCEEEE-ccCCCCCHHHHHHHHHHHHcCC-CCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHH
Q 031219 53 ADAFIA-LPGGYGTLEELLEVITWAQLGI-HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICK 130 (163)
Q Consensus 53 sDafIa-lPGG~GTLdEl~e~~~~~qlg~-~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~ 130 (163)
.|++++ ++||+-..+++.+.+.-..-.. ++||+++.-. |- ...+-.+.+.+ ..+...++++++++.
T Consensus 302 v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~-G~--~~~~~~~~l~~---------~gip~~~~~e~Aa~~ 369 (397)
T 3ufx_B 302 VKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA-GT--AEEEAKKLLEG---------KPVYMYPTSIEAAKV 369 (397)
T ss_dssp CCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEE-EE--CHHHHHHHTTT---------SSEEECSSHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEcc-CC--CHHHHHHHHHh---------CCCcccCCHHHHHHH
Confidence 577665 8899999999998876433222 4899887543 22 11121222211 238999999999999
Q ss_pred HHhhcCCCCCCccccceecccccc
Q 031219 131 LEEYVPKHSGVASNLSWEMEQQLG 154 (163)
Q Consensus 131 l~~~~~~~~~~~~~~~w~~~~~~~ 154 (163)
+.+... +..|.++ .+|
T Consensus 370 ~~~l~~-------~a~w~~~-~~g 385 (397)
T 3ufx_B 370 TVAMKG-------GAAWLEF-APG 385 (397)
T ss_dssp HHHSCC-------SCC--------
T ss_pred HHHHHH-------HhHHhhC-CCC
Confidence 977633 2368776 444
No 25
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=84.35 E-value=10 Score=31.31 Aligned_cols=77 Identities=17% Similarity=0.154 Sum_probs=43.8
Q ss_pred EEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCcccc
Q 031219 36 VKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAAR 115 (163)
Q Consensus 36 li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~ 115 (163)
+.++..... . .++..+|+||. .||.||+.|.. . +.+|++++.. +.+.. ...+.+.+.|.
T Consensus 321 v~~~~~~~~-~-~ll~~ad~~V~-~~G~~t~~Ea~---~------~G~P~i~~p~--~~dQ~-~na~~l~~~g~------ 379 (441)
T 2yjn_A 321 VRTVGFVPM-H-ALLPTCAATVH-HGGPGSWHTAA---I------HGVPQVILPD--GWDTG-VRAQRTQEFGA------ 379 (441)
T ss_dssp EEECCSCCH-H-HHGGGCSEEEE-CCCHHHHHHHH---H------TTCCEEECCC--SHHHH-HHHHHHHHHTS------
T ss_pred EEEecCCCH-H-HHHhhCCEEEE-CCCHHHHHHHH---H------hCCCEEEeCC--cccHH-HHHHHHHHcCC------
Confidence 344443333 2 34689999886 78889976665 2 4899999864 22322 22334444442
Q ss_pred ccEEEe---CCHHHHHHHHHhh
Q 031219 116 YIIVSA---QTAHELICKLEEY 134 (163)
Q Consensus 116 ~~i~~~---~~~ee~~~~l~~~ 134 (163)
.+.+- -+++++.+.|.+.
T Consensus 380 -g~~~~~~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 380 -GIALPVPELTPDQLRESVKRV 400 (441)
T ss_dssp -EEECCTTTCCHHHHHHHHHHH
T ss_pred -EEEcccccCCHHHHHHHHHHH
Confidence 12221 1677777766654
No 26
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=82.41 E-value=5.9 Score=31.85 Aligned_cols=66 Identities=15% Similarity=0.055 Sum_probs=38.5
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe---CCHH
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA---QTAH 125 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~---~~~e 125 (163)
++..+|+||. .||.||+.|.+ . +.+|++++.. +.+.. ...+.+.+.|. .+.+. -+++
T Consensus 276 ~l~~~d~~v~-~~G~~t~~Ea~---~------~G~P~v~~p~--~~dq~-~~a~~~~~~g~-------g~~~~~~~~~~~ 335 (384)
T 2p6p_A 276 VAPTCDLLVH-HAGGVSTLTGL---S------AGVPQLLIPK--GSVLE-APARRVADYGA-------AIALLPGEDSTE 335 (384)
T ss_dssp HGGGCSEEEE-CSCTTHHHHHH---H------TTCCEEECCC--SHHHH-HHHHHHHHHTS-------EEECCTTCCCHH
T ss_pred HHhhCCEEEe-CCcHHHHHHHH---H------hCCCEEEccC--cccch-HHHHHHHHCCC-------eEecCcCCCCHH
Confidence 4588998886 78889976654 3 4899999864 22222 22233444331 12221 1677
Q ss_pred HHHHHHHhh
Q 031219 126 ELICKLEEY 134 (163)
Q Consensus 126 e~~~~l~~~ 134 (163)
++.+.+.+.
T Consensus 336 ~l~~~i~~l 344 (384)
T 2p6p_A 336 AIADSCQEL 344 (384)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766654
No 27
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=81.14 E-value=18 Score=29.49 Aligned_cols=67 Identities=21% Similarity=0.212 Sum_probs=39.7
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe---CCH
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA---QTA 124 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~---~~~ 124 (163)
.++..+|+||. .||.||+-|.. . +.+|++++.. +.+-....+.+.+.|. .+.+. -++
T Consensus 317 ~~l~~~d~~v~-~~G~~t~~Ea~---~------~G~P~i~~p~---~~dQ~~na~~l~~~g~-------g~~~~~~~~~~ 376 (424)
T 2iya_A 317 DILTKASAFIT-HAGMGSTMEAL---S------NAVPMVAVPQ---IAEQTMNAERIVELGL-------GRHIPRDQVTA 376 (424)
T ss_dssp HHHTTCSEEEE-CCCHHHHHHHH---H------TTCCEEECCC---SHHHHHHHHHHHHTTS-------EEECCGGGCCH
T ss_pred HHHhhCCEEEE-CCchhHHHHHH---H------cCCCEEEecC---ccchHHHHHHHHHCCC-------EEEcCcCCCCH
Confidence 46778998664 78889876654 2 4899999853 3222222344544442 11111 177
Q ss_pred HHHHHHHHhh
Q 031219 125 HELICKLEEY 134 (163)
Q Consensus 125 ee~~~~l~~~ 134 (163)
+++.+.+++.
T Consensus 377 ~~l~~~i~~l 386 (424)
T 2iya_A 377 EKLREAVLAV 386 (424)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7877777664
No 28
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=80.97 E-value=2.7 Score=34.20 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=25.5
Q ss_pred HHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 47 AEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 47 ~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
..++..||+|| ..||.||+.|.+ . +.+|++++..
T Consensus 295 ~~ll~~ad~~v-~~gG~~t~~Ea~---~------~G~P~v~~p~ 328 (398)
T 4fzr_A 295 SAIMPACDVVV-HHGGHGTTLTCL---S------EGVPQVSVPV 328 (398)
T ss_dssp HHHGGGCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC
T ss_pred HHHHhhCCEEE-ecCCHHHHHHHH---H------hCCCEEecCC
Confidence 45677899988 688889975554 3 4899999853
No 29
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=78.61 E-value=11 Score=30.45 Aligned_cols=68 Identities=19% Similarity=0.278 Sum_probs=39.0
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe---CCH
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA---QTA 124 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~---~~~ 124 (163)
.++..||+|| ..||.||+.|.+ . ..+|++++-. +.+... .-+.+.+.|. .+.+. -++
T Consensus 309 ~ll~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~--~~~q~~-~a~~l~~~g~-------g~~~~~~~~~~ 368 (415)
T 3rsc_A 309 KVLEQATVCV-THGGMGTLMEAL---Y------WGRPLVVVPQ--SFDVQP-MARRVDQLGL-------GAVLPGEKADG 368 (415)
T ss_dssp HHHHHEEEEE-ESCCHHHHHHHH---H------TTCCEEECCC--SGGGHH-HHHHHHHHTC-------EEECCGGGCCH
T ss_pred HHHhhCCEEE-ECCcHHHHHHHH---H------hCCCEEEeCC--cchHHH-HHHHHHHcCC-------EEEcccCCCCH
Confidence 5677799855 678889976654 2 4899999742 222221 1233444332 11111 177
Q ss_pred HHHHHHHHhhc
Q 031219 125 HELICKLEEYV 135 (163)
Q Consensus 125 ee~~~~l~~~~ 135 (163)
+++.+.+.+..
T Consensus 369 ~~l~~~i~~ll 379 (415)
T 3rsc_A 369 DTLLAAVGAVA 379 (415)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88877776653
No 30
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=78.51 E-value=13 Score=29.61 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=38.3
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeC---CH
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQ---TA 124 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~---~~ 124 (163)
.++..||+|| ..||.||+.|. +. +.+|++++-.. ..+... .-+.+.+.|. .+.+.. ++
T Consensus 293 ~ll~~ad~~v-~~~G~~t~~Ea---~~------~G~P~v~~p~~-~~~q~~-~a~~~~~~g~-------g~~~~~~~~~~ 353 (402)
T 3ia7_A 293 SVLAHARACL-THGTTGAVLEA---FA------AGVPLVLVPHF-ATEAAP-SAERVIELGL-------GSVLRPDQLEP 353 (402)
T ss_dssp HHHTTEEEEE-ECCCHHHHHHH---HH------TTCCEEECGGG-CGGGHH-HHHHHHHTTS-------EEECCGGGCSH
T ss_pred HHHhhCCEEE-ECCCHHHHHHH---HH------hCCCEEEeCCC-cccHHH-HHHHHHHcCC-------EEEccCCCCCH
Confidence 5677898755 67888997664 33 48999987430 122211 1233444442 122211 67
Q ss_pred HHHHHHHHhh
Q 031219 125 HELICKLEEY 134 (163)
Q Consensus 125 ee~~~~l~~~ 134 (163)
+++.+.+.+.
T Consensus 354 ~~l~~~~~~l 363 (402)
T 3ia7_A 354 ASIREAVERL 363 (402)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777654
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=77.42 E-value=3.5 Score=32.97 Aligned_cols=66 Identities=14% Similarity=0.109 Sum_probs=40.5
Q ss_pred HHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCH
Q 031219 45 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTA 124 (163)
Q Consensus 45 Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ 124 (163)
....++..||+|| +|. |++ +.|++.. .+|+|.....+-...+ ++.| ..+.+-.|+
T Consensus 267 ~~~~~~~~ad~~v-~~S--~g~--~lEA~a~------G~PvI~~~~~~~~~~~-------~~~g-------~g~lv~~d~ 321 (376)
T 1v4v_A 267 SMAALMRASLLLV-TDS--GGL--QEEGAAL------GVPVVVLRNVTERPEG-------LKAG-------ILKLAGTDP 321 (376)
T ss_dssp HHHHHHHTEEEEE-ESC--HHH--HHHHHHT------TCCEEECSSSCSCHHH-------HHHT-------SEEECCSCH
T ss_pred HHHHHHHhCcEEE-ECC--cCH--HHHHHHc------CCCEEeccCCCcchhh-------hcCC-------ceEECCCCH
Confidence 4567788999985 555 565 6788865 8999987422333332 2222 122222688
Q ss_pred HHHHHHHHhhc
Q 031219 125 HELICKLEEYV 135 (163)
Q Consensus 125 ee~~~~l~~~~ 135 (163)
+++.+.+.+..
T Consensus 322 ~~la~~i~~ll 332 (376)
T 1v4v_A 322 EGVYRVVKGLL 332 (376)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888777654
No 32
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=76.76 E-value=14 Score=30.22 Aligned_cols=106 Identities=18% Similarity=0.180 Sum_probs=55.0
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCCcccCCCcc-eEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCC
Q 031219 3 LVSQAVYDGGRHVLGVIPKTLMPREITGDTVG-EVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIH 81 (163)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e~~~~~~~-~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~ 81 (163)
.+.++..+.+-+++=++...... . ..+. .+.++..... ..+ +..+|+||- .||.||+.|.. . +
T Consensus 257 ~~~~al~~~~~~~v~~~g~~~~~--~--~~~~~~v~~~~~~~~-~~~-l~~~d~~v~-~~G~~t~~Ea~---~------~ 320 (415)
T 1iir_A 257 VAIDAIRAHGRRVILSRGWADLV--L--PDDGADCFAIGEVNH-QVL-FGRVAAVIH-HGGAGTTHVAA---R------A 320 (415)
T ss_dssp HHHHHHHHTTCCEEECTTCTTCC--C--SSCGGGEEECSSCCH-HHH-GGGSSEEEE-CCCHHHHHHHH---H------H
T ss_pred HHHHHHHHCCCeEEEEeCCCccc--c--cCCCCCEEEeCcCCh-HHH-HhhCCEEEe-CCChhHHHHHH---H------c
Confidence 34555555555555443322111 1 1121 2344444333 333 599999886 78889977665 2 2
Q ss_pred CCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe---CCHHHHHHHHHhh
Q 031219 82 DKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA---QTAHELICKLEEY 134 (163)
Q Consensus 82 ~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~---~~~ee~~~~l~~~ 134 (163)
.+|++++.. +.+... ..+.+.+.|. .+.+. -+++++.+.|++.
T Consensus 321 G~P~i~~p~--~~dQ~~-na~~l~~~g~-------g~~~~~~~~~~~~l~~~i~~l 366 (415)
T 1iir_A 321 GAPQILLPQ--MADQPY-YAGRVAELGV-------GVAHDGPIPTFDSLSAALATA 366 (415)
T ss_dssp TCCEEECCC--STTHHH-HHHHHHHHTS-------EEECSSSSCCHHHHHHHHHHH
T ss_pred CCCEEECCC--CCccHH-HHHHHHHCCC-------cccCCcCCCCHHHHHHHHHHH
Confidence 899999864 233322 2334444332 11111 2677777777665
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=76.58 E-value=9.5 Score=30.15 Aligned_cols=65 Identities=12% Similarity=0.132 Sum_probs=40.5
Q ss_pred HHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCH
Q 031219 45 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTA 124 (163)
Q Consensus 45 Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ 124 (163)
....++..||+|| +|. |+. +.|++.. .+|+|..+..|-...+ ++.| ..+.+-.|+
T Consensus 275 ~~~~~~~~ad~~v-~~s--g~~--~lEA~a~------G~Pvi~~~~~~~~~e~-------v~~g-------~g~~v~~d~ 329 (375)
T 3beo_A 275 DFHNVAARSYLML-TDS--GGV--QEEAPSL------GVPVLVLRDTTERPEG-------IEAG-------TLKLAGTDE 329 (375)
T ss_dssp HHHHHHHTCSEEE-ECC--HHH--HHHHHHH------TCCEEECSSCCSCHHH-------HHTT-------SEEECCSCH
T ss_pred HHHHHHHhCcEEE-ECC--CCh--HHHHHhc------CCCEEEecCCCCCcee-------ecCC-------ceEEcCCCH
Confidence 5566788899986 454 444 7788876 8999988432333332 3322 233333588
Q ss_pred HHHHHHHHhh
Q 031219 125 HELICKLEEY 134 (163)
Q Consensus 125 ee~~~~l~~~ 134 (163)
+++.+.|.+.
T Consensus 330 ~~la~~i~~l 339 (375)
T 3beo_A 330 ETIFSLADEL 339 (375)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887777654
No 34
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=76.26 E-value=4.5 Score=32.57 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=40.2
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe-----CC
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA-----QT 123 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~-----~~ 123 (163)
++..||+|| ..||.||+.|.+ . +.+|++++.. +.+.. ...+.+.+.|. .+.+. .|
T Consensus 283 ll~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~--~~~q~-~~a~~~~~~g~-------g~~~~~~~~~~~ 342 (391)
T 3tsa_A 283 FLRTCELVI-CAGGSGTAFTAT---R------LGIPQLVLPQ--YFDQF-DYARNLAAAGA-------GICLPDEQAQSD 342 (391)
T ss_dssp TGGGCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC--STTHH-HHHHHHHHTTS-------EEECCSHHHHTC
T ss_pred HHhhCCEEE-eCCCHHHHHHHH---H------hCCCEEecCC--cccHH-HHHHHHHHcCC-------EEecCcccccCC
Confidence 348999988 578889976554 3 4899999853 23322 12234444442 22222 36
Q ss_pred HHHHHHHHHhhc
Q 031219 124 AHELICKLEEYV 135 (163)
Q Consensus 124 ~ee~~~~l~~~~ 135 (163)
++++.+.+.+..
T Consensus 343 ~~~l~~ai~~ll 354 (391)
T 3tsa_A 343 HEQFTDSIATVL 354 (391)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777654
No 35
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=73.72 E-value=10 Score=30.89 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=23.6
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
.++..||+|| ..||.+|+-|.+ . +.+|+++...
T Consensus 295 ~~l~~ad~~v-~~~G~~t~~Ea~---~------~G~P~i~~p~ 327 (430)
T 2iyf_A 295 AILRQADLFV-THAGAGGSQEGL---A------TATPMIAVPQ 327 (430)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC
T ss_pred HHhhccCEEE-ECCCccHHHHHH---H------hCCCEEECCC
Confidence 4677899865 578878865544 3 4899998853
No 36
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=73.70 E-value=16 Score=29.90 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=38.2
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe---CCH
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA---QTA 124 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~---~~~ 124 (163)
.++..+|+|| -.||.||+.|.. . +.+|++++-. +.+... ..+.+.+.|.- +.+. -++
T Consensus 280 ~ll~~~d~~v-~~gG~~t~~Eal---~------~GvP~v~~p~--~~dQ~~-na~~~~~~G~g-------~~l~~~~~~~ 339 (404)
T 3h4t_A 280 VLFGRVAAVV-HHGGAGTTTAVT---R------AGAPQVVVPQ--KADQPY-YAGRVADLGVG-------VAHDGPTPTV 339 (404)
T ss_dssp HHGGGSSEEE-ECCCHHHHHHHH---H------HTCCEEECCC--STTHHH-HHHHHHHHTSE-------EECSSSSCCH
T ss_pred HHHhhCcEEE-ECCcHHHHHHHH---H------cCCCEEEcCC--cccHHH-HHHHHHHCCCE-------eccCcCCCCH
Confidence 3557888876 677789976665 3 3899999842 233222 23445444421 1111 167
Q ss_pred HHHHHHHHhh
Q 031219 125 HELICKLEEY 134 (163)
Q Consensus 125 ee~~~~l~~~ 134 (163)
+++.+.+.+.
T Consensus 340 ~~l~~ai~~l 349 (404)
T 3h4t_A 340 ESLSAALATA 349 (404)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7776666654
No 37
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=73.45 E-value=11 Score=30.91 Aligned_cols=66 Identities=18% Similarity=0.175 Sum_probs=39.9
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEE---eCCHH
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVS---AQTAH 125 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~---~~~~e 125 (163)
++..+|+||. -||.||+.|.. . +.+|++++.. +.+... ..+.+.+.|. .+.+ .-+++
T Consensus 299 ll~~~d~~v~-~~G~~t~~Ea~---~------~G~P~i~~p~--~~dQ~~-na~~l~~~g~-------g~~~~~~~~~~~ 358 (416)
T 1rrv_A 299 LFRRVAAVIH-HGSAGTEHVAT---R------AGVPQLVIPR--NTDQPY-FAGRVAALGI-------GVAHDGPTPTFE 358 (416)
T ss_dssp HGGGSSEEEE-CCCHHHHHHHH---H------HTCCEEECCC--SBTHHH-HHHHHHHHTS-------EEECSSSCCCHH
T ss_pred HhccCCEEEe-cCChhHHHHHH---H------cCCCEEEccC--CCCcHH-HHHHHHHCCC-------ccCCCCCCCCHH
Confidence 4599999887 78889987765 2 3899999864 333322 2334444442 1111 12677
Q ss_pred HHHHHHHhh
Q 031219 126 ELICKLEEY 134 (163)
Q Consensus 126 e~~~~l~~~ 134 (163)
++.+.+++.
T Consensus 359 ~l~~~i~~l 367 (416)
T 1rrv_A 359 SLSAALTTV 367 (416)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777777665
No 38
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=72.93 E-value=11 Score=27.03 Aligned_cols=71 Identities=14% Similarity=0.236 Sum_probs=46.5
Q ss_pred HHHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe
Q 031219 44 QRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA 121 (163)
Q Consensus 44 ~Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~ 121 (163)
+....++..||++|..+ .|+|. =++|++.. .+|+|..+.. .+ ..++. ......+. .
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~--~~~Eama~------G~PvI~~~~~----~~----~e~i~-----~~~~g~~~-~ 146 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGL--TPIEAMAS------GKPVIAVNEG----GF----KETVI-----NEKTGYLV-N 146 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCH--HHHHHHHT------TCCEEEESSH----HH----HHHCC-----BTTTEEEE-C
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCh--HHHHHHHc------CCcEEEeCCC----CH----HHHhc-----CCCccEEe-C
Confidence 44677889999998744 46664 35777754 8999987642 11 12222 22233444 8
Q ss_pred CCHHHHHHHHHhhcC
Q 031219 122 QTAHELICKLEEYVP 136 (163)
Q Consensus 122 ~~~ee~~~~l~~~~~ 136 (163)
+|++++.+.|.+...
T Consensus 147 ~d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 147 ADVNEIIDAMKKVSK 161 (177)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999988753
No 39
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=72.01 E-value=8.5 Score=30.62 Aligned_cols=66 Identities=12% Similarity=0.110 Sum_probs=39.5
Q ss_pred HHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCC
Q 031219 44 QRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQT 123 (163)
Q Consensus 44 ~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~ 123 (163)
+....++..||+||. |. |++ +.|++.. .+|+|..+..|-...+ ++.| ..+.+-.|
T Consensus 274 ~~~~~~~~~ad~~v~-~S--g~~--~lEA~a~------G~PvI~~~~~~~~~e~-------v~~g-------~g~lv~~d 328 (384)
T 1vgv_A 274 LPFVWLMNHAWLILT-DS--GGI--QEEAPSL------GKPVLVMRDTTERPEA-------VTAG-------TVRLVGTD 328 (384)
T ss_dssp HHHHHHHHHCSEEEE-SS--STG--GGTGGGG------TCCEEEESSCCSCHHH-------HHHT-------SEEEECSS
T ss_pred HHHHHHHHhCcEEEE-CC--cch--HHHHHHc------CCCEEEccCCCCcchh-------hhCC-------ceEEeCCC
Confidence 456677888999765 44 333 5666644 8999998752333332 2222 23334348
Q ss_pred HHHHHHHHHhh
Q 031219 124 AHELICKLEEY 134 (163)
Q Consensus 124 ~ee~~~~l~~~ 134 (163)
++++.+.|.+.
T Consensus 329 ~~~la~~i~~l 339 (384)
T 1vgv_A 329 KQRIVEEVTRL 339 (384)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887777654
No 40
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=71.20 E-value=3.6 Score=32.27 Aligned_cols=55 Identities=25% Similarity=0.348 Sum_probs=35.2
Q ss_pred HHHHHHH-hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCC-cchHHHHHHHHHHHcCC
Q 031219 45 RKAEMAR-QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDG-YYNSLLSFIDKAVDEGF 109 (163)
Q Consensus 45 Rk~~m~~-~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~G-fw~~l~~~l~~~~~~gf 109 (163)
....++. .||++|.= ||.||+.|+. ...||.|++-... ..++=....+.+.+.|.
T Consensus 124 ~m~~~l~~~AdlvIsh-aGagTv~Eal---------~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~ 180 (224)
T 2jzc_A 124 KMQSIIRDYSDLVISH-AGTGSILDSL---------RLNKPLIVCVNDSLMDNHQQQIADKFVELGY 180 (224)
T ss_dssp SHHHHHHHHCSCEEES-SCHHHHHHHH---------HTTCCCCEECCSSCCCCHHHHHHHHHHHHSC
T ss_pred hHHHHHHhcCCEEEEC-CcHHHHHHHH---------HhCCCEEEEcCcccccchHHHHHHHHHHCCC
Confidence 3334567 88887765 8999988776 2489999985321 23433333456777675
No 41
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=69.36 E-value=2.6 Score=34.08 Aligned_cols=32 Identities=9% Similarity=0.175 Sum_probs=24.8
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
.++..||.+|. +|| +|+.|+. + ..+|.+++-.
T Consensus 221 ~~m~~aDlvI~-~gG-~T~~E~~---~------~g~P~i~ip~ 252 (282)
T 3hbm_A 221 KLMNESNKLII-SAS-SLVNEAL---L------LKANFKAICY 252 (282)
T ss_dssp HHHHTEEEEEE-ESS-HHHHHHH---H------TTCCEEEECC
T ss_pred HHHHHCCEEEE-CCc-HHHHHHH---H------cCCCEEEEeC
Confidence 46788999998 788 7987765 3 2899999754
No 42
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=67.48 E-value=7.9 Score=32.10 Aligned_cols=74 Identities=14% Similarity=0.128 Sum_probs=42.9
Q ss_pred EEecCCH-HHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccc
Q 031219 36 VKAVSGM-HQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAA 114 (163)
Q Consensus 36 li~~~~m-~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~ 114 (163)
+.+++.+ ......++..||++|. +-| |+. .|+..+ .+|+++.+..+-+..+ ++.|
T Consensus 290 v~~~~~lg~~~~~~l~~~ad~vv~-~SG-g~~---~EA~a~------G~PvV~~~~~~~~~e~-------v~~G------ 345 (396)
T 3dzc_A 290 IVLIEPQQYLPFVYLMDRAHIILT-DSG-GIQ---EEAPSL------GKPVLVMRETTERPEA-------VAAG------ 345 (396)
T ss_dssp EEEECCCCHHHHHHHHHHCSEEEE-SCS-GGG---TTGGGG------TCCEEECCSSCSCHHH-------HHHT------
T ss_pred EEEeCCCCHHHHHHHHHhcCEEEE-CCc-cHH---HHHHHc------CCCEEEccCCCcchHH-------HHcC------
Confidence 4444444 2345678889998754 434 444 444543 8999998444455432 3333
Q ss_pred cccEEEeCCHHHHHHHHHhh
Q 031219 115 RYIIVSAQTAHELICKLEEY 134 (163)
Q Consensus 115 ~~~i~~~~~~ee~~~~l~~~ 134 (163)
..+.+-.|++++.+.+.+.
T Consensus 346 -~~~lv~~d~~~l~~ai~~l 364 (396)
T 3dzc_A 346 -TVKLVGTNQQQICDALSLL 364 (396)
T ss_dssp -SEEECTTCHHHHHHHHHHH
T ss_pred -ceEEcCCCHHHHHHHHHHH
Confidence 1233334788888777664
No 43
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=65.97 E-value=31 Score=26.92 Aligned_cols=69 Identities=26% Similarity=0.240 Sum_probs=43.6
Q ss_pred HHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEE--
Q 031219 45 RKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVS-- 120 (163)
Q Consensus 45 Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~-- 120 (163)
....++..||++|.-. .|+|+ =++|+++. .+|+|..+..|.-+ ++. .- ...+.+
T Consensus 263 ~~~~~~~~ad~~v~ps~~e~~~~--~~~Ea~a~------G~Pvi~~~~~~~~e-~i~---~~----------~~g~~~~~ 320 (374)
T 2iw1_A 263 DVSELMAAADLLLHPAYQEAAGI--VLLEAITA------GLPVLTTAVCGYAH-YIA---DA----------NCGTVIAE 320 (374)
T ss_dssp CHHHHHHHCSEEEECCSCCSSCH--HHHHHHHH------TCCEEEETTSTTTH-HHH---HH----------TCEEEECS
T ss_pred cHHHHHHhcCEEEeccccCCccc--HHHHHHHC------CCCEEEecCCCchh-hhc---cC----------CceEEeCC
Confidence 3456788899888644 46665 47777765 89999988754432 221 11 123333
Q ss_pred eCCHHHHHHHHHhhc
Q 031219 121 AQTAHELICKLEEYV 135 (163)
Q Consensus 121 ~~~~ee~~~~l~~~~ 135 (163)
..|++++.+.|.+..
T Consensus 321 ~~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 321 PFSQEQLNEVLRKAL 335 (374)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 348888888887653
No 44
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=62.89 E-value=28 Score=27.27 Aligned_cols=74 Identities=14% Similarity=0.038 Sum_probs=40.1
Q ss_pred HHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCC-
Q 031219 45 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQT- 123 (163)
Q Consensus 45 Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~- 123 (163)
....++..||+||.- +|.+| +.|++.. .+|+|..+..|.-++-....+.+++.| ...+.-.+|
T Consensus 247 ~~~~~~~~ad~~v~~-sg~~~---~~EAma~------G~Pvi~~~~~g~~~~q~~~~~~~~~~g------~g~~~~~~d~ 310 (364)
T 1f0k_A 247 DMAAAYAWADVVVCR-SGALT---VSEIAAA------GLPALFVPFQHKDRQQYWNALPLEKAG------AAKIIEQPQL 310 (364)
T ss_dssp CHHHHHHHCSEEEEC-CCHHH---HHHHHHH------TCCEEECCCCCTTCHHHHHHHHHHHTT------SEEECCGGGC
T ss_pred hHHHHHHhCCEEEEC-CchHH---HHHHHHh------CCCEEEeeCCCCchhHHHHHHHHHhCC------cEEEeccccC
Confidence 345677889987764 45444 4555554 899999987654121111123344433 112222233
Q ss_pred -HHHHHHHHHhh
Q 031219 124 -AHELICKLEEY 134 (163)
Q Consensus 124 -~ee~~~~l~~~ 134 (163)
++++.+.|.+.
T Consensus 311 ~~~~la~~i~~l 322 (364)
T 1f0k_A 311 SVDAVANTLAGW 322 (364)
T ss_dssp CHHHHHHHHHTC
T ss_pred CHHHHHHHHHhc
Confidence 77777777654
No 45
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=62.20 E-value=16 Score=29.56 Aligned_cols=32 Identities=28% Similarity=0.294 Sum_probs=23.9
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEe
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 89 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln 89 (163)
.++..||+|| ..||.||+.|. +.. .+|++++.
T Consensus 295 ~ll~~ad~~v-~~~G~~t~~Ea---l~~------G~P~v~~p 326 (398)
T 3oti_A 295 TLLRTCTAVV-HHGGGGTVMTA---IDA------GIPQLLAP 326 (398)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHH---HHH------TCCEEECC
T ss_pred HHHhhCCEEE-ECCCHHHHHHH---HHh------CCCEEEcC
Confidence 4667799887 68899997554 433 89999974
No 46
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=61.65 E-value=20 Score=24.72 Aligned_cols=71 Identities=13% Similarity=0.130 Sum_probs=44.2
Q ss_pred HHHHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCC-cEEEEecCCcchHHHHHHHHHHHcCCCCccccccEE
Q 031219 43 HQRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDK-PVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIV 119 (163)
Q Consensus 43 ~~Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~k-Pivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~ 119 (163)
.+....++..||++|.-. .|+|. =++|++.. .+ ||+..+..|....+.. . ...++
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~--~~~Eama~------G~vPvi~~~~~~~~~~~~~------------~--~~~~~ 122 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAI--ACLEAISV------GIVPVIANSPLSATRQFAL------------D--ERSLF 122 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCH--HHHHHHHT------TCCEEEECCTTCGGGGGCS------------S--GGGEE
T ss_pred HHHHHHHHHhCCEEEECCcccCccH--HHHHHHhc------CCCcEEeeCCCCchhhhcc------------C--CceEE
Confidence 455667788899887633 35554 56777754 87 9998443333332221 1 23366
Q ss_pred EeCCHHHHHHHHHhhc
Q 031219 120 SAQTAHELICKLEEYV 135 (163)
Q Consensus 120 ~~~~~ee~~~~l~~~~ 135 (163)
..+|++++.+.|.+..
T Consensus 123 ~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 123 EPNNAKDLSAKIDWWL 138 (166)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHH
Confidence 7778999888887653
No 47
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=60.51 E-value=37 Score=27.01 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=41.5
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCC
Q 031219 3 LVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHD 82 (163)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~ 82 (163)
++.++..+.+-.++-......... .........+...... ..++..+|+|| --||.||+.|.. . +.
T Consensus 259 ~~~~~l~~~~~~~v~~~~~~~~~~--~~~~~~~v~~~~~~p~--~~lL~~~~~~v-~h~G~~s~~Eal---~------~G 324 (400)
T 4amg_A 259 PLFSEVADVDAEFVLTLGGGDLAL--LGELPANVRVVEWIPL--GALLETCDAII-HHGGSGTLLTAL---A------AG 324 (400)
T ss_dssp HHHHHGGGSSSEEEEECCTTCCCC--CCCCCTTEEEECCCCH--HHHHTTCSEEE-ECCCHHHHHHHH---H------HT
T ss_pred HHHHHhhccCceEEEEecCccccc--cccCCCCEEEEeecCH--HHHhhhhhhee-ccCCccHHHHHH---H------hC
Confidence 455666667777776655443221 1111122333443332 23557788865 688899976654 3 38
Q ss_pred CcEEEEe
Q 031219 83 KPVGLLN 89 (163)
Q Consensus 83 kPivlln 89 (163)
+|++++-
T Consensus 325 vP~v~~P 331 (400)
T 4amg_A 325 VPQCVIP 331 (400)
T ss_dssp CCEEECC
T ss_pred CCEEEec
Confidence 9999974
No 48
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=58.51 E-value=25 Score=27.59 Aligned_cols=71 Identities=24% Similarity=0.234 Sum_probs=44.9
Q ss_pred HHHHHHHHhcCEEEEcc---------CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccc
Q 031219 44 QRKAEMARQADAFIALP---------GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAA 114 (163)
Q Consensus 44 ~Rk~~m~~~sDafIalP---------GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~ 114 (163)
+....++..||++|... .|+|+ =++|++.. .+|+|..+..|. ..+ +...
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~--~~~Ea~a~------G~PvI~~~~~~~-~e~------------i~~~- 321 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGI--VYLEAQAC------GVPVIAGTSGGA-PET------------VTPA- 321 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCH--HHHHHHHT------TCCEEECSSTTG-GGG------------CCTT-
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCc--HHHHHHHc------CCCEEEeCCCCh-HHH------------HhcC-
Confidence 55566788999988743 66665 57777754 899999776432 221 2222
Q ss_pred cccEEEeCCHHHHHHHHHhhcC
Q 031219 115 RYIIVSAQTAHELICKLEEYVP 136 (163)
Q Consensus 115 ~~~i~~~~~~ee~~~~l~~~~~ 136 (163)
...+.-.+|++++.+.|.+...
T Consensus 322 ~g~~~~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 322 TGLVVEGSDVDKLSELLIELLD 343 (394)
T ss_dssp TEEECCTTCHHHHHHHHHHHHT
T ss_pred CceEeCCCCHHHHHHHHHHHHh
Confidence 2233333589998888877543
No 49
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=57.79 E-value=42 Score=27.71 Aligned_cols=77 Identities=12% Similarity=0.119 Sum_probs=47.9
Q ss_pred eEEecCCH-HHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCcc
Q 031219 35 EVKAVSGM-HQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPA 113 (163)
Q Consensus 35 ~li~~~~m-~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~ 113 (163)
.+..++.+ ......++..||.+|.=.||+ ..|+..+ ++|++.++...-|... ++.|
T Consensus 264 ~v~l~~~lg~~~~~~l~~~adlvvt~SGgv-----~~EA~al------G~Pvv~~~~~ter~e~-------v~~G----- 320 (385)
T 4hwg_A 264 KIRFLPAFSFTDYVKLQMNAFCILSDSGTI-----TEEASIL------NLPALNIREAHERPEG-------MDAG----- 320 (385)
T ss_dssp GEEECCCCCHHHHHHHHHHCSEEEECCTTH-----HHHHHHT------TCCEEECSSSCSCTHH-------HHHT-----
T ss_pred CEEEEcCCCHHHHHHHHHhCcEEEECCccH-----HHHHHHc------CCCEEEcCCCccchhh-------hhcC-----
Confidence 45555554 334667899999998766652 2455554 8999998754334432 3333
Q ss_pred ccccEEEeCCHHHHHHHHHhhcC
Q 031219 114 ARYIIVSAQTAHELICKLEEYVP 136 (163)
Q Consensus 114 ~~~~i~~~~~~ee~~~~l~~~~~ 136 (163)
..+.+-.|++++.+.+.+...
T Consensus 321 --~~~lv~~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 321 --TLIMSGFKAERVLQAVKTITE 341 (385)
T ss_dssp --CCEECCSSHHHHHHHHHHHHT
T ss_pred --ceEEcCCCHHHHHHHHHHHHh
Confidence 123333589999888877543
No 50
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=57.42 E-value=24 Score=29.00 Aligned_cols=56 Identities=18% Similarity=0.260 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHH
Q 031219 44 QRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFID 102 (163)
Q Consensus 44 ~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~ 102 (163)
+|-....+..|+|||+= |.=||+|-..++++.- ..+|||||.+- .--.|...+++.
T Consensus 71 ~~I~~~~~~~dG~VItH-GTDTmeeTA~~Ls~~l--~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 131 (326)
T 1nns_A 71 KKINTDCDKTDGFVITH-GTDTMEETAYFLDLTV--KCDKPVVMVGAMRPSTSMSADGPFNLYN 131 (326)
T ss_dssp HHHHHHGGGCSEEEEEC-CSSSHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred HHHHHHhhcCCcEEEEc-CchhHHHHHHHHHHhc--CCCCCEEEeCCCCCCcCCCCchHHHHHH
Confidence 33333344459999985 5799999999999764 35899999753 123444555554
No 51
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=56.77 E-value=20 Score=29.43 Aligned_cols=87 Identities=14% Similarity=0.113 Sum_probs=48.7
Q ss_pred HHHHHHHHHhcCEEEEc--cCCCCCHHHHHHHH-HHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccE-
Q 031219 43 HQRKAEMARQADAFIAL--PGGYGTLEELLEVI-TWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYII- 118 (163)
Q Consensus 43 ~~Rk~~m~~~sDafIal--PGG~GTLdEl~e~~-~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i- 118 (163)
++....++..||+||.- ..|+|. =+.|++ -+...=...+|||..+. +.......+
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~--~~lEAm~Kl~eYla~G~PVIas~~-------------------v~~~~~G~l~ 333 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPV--YLADSSMKLLQYDFFGLPAVCPNA-------------------VVGPYKSRFG 333 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCT--THHHHCHHHHHHHHHTCCEEEEGG-------------------GTCSCSSEEE
T ss_pred HHHHHHHHHhcCEEEECCCcccCch--HHHHHHHHHHHHhhCCCcEEEehh-------------------cccCcceEEE
Confidence 35566788999998752 356655 234443 00000013899998753 222233445
Q ss_pred EEeCCHHHHHHHHHhhcCCC-CCCccccceecc
Q 031219 119 VSAQTAHELICKLEEYVPKH-SGVASNLSWEME 150 (163)
Q Consensus 119 ~~~~~~ee~~~~l~~~~~~~-~~~~~~~~w~~~ 150 (163)
+-.+|++++.+.|.+..... ......++|..-
T Consensus 334 v~~~d~~~la~ai~~ll~~~~~~~~~~~sw~~~ 366 (406)
T 2hy7_A 334 YTPGNADSVIAAITQALEAPRVRYRQCLNWSDT 366 (406)
T ss_dssp ECTTCHHHHHHHHHHHHHCCCCCCSCCCBHHHH
T ss_pred eCCCCHHHHHHHHHHHHhCcchhhhhcCCHHHH
Confidence 55678999888887654221 123445667643
No 52
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=55.01 E-value=41 Score=26.72 Aligned_cols=43 Identities=30% Similarity=0.333 Sum_probs=31.0
Q ss_pred HhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcc
Q 031219 51 RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 94 (163)
Q Consensus 51 ~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw 94 (163)
+...+.|+|+|| .|...+++.+.-..-+.--+-+.+++.+-||
T Consensus 53 ~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 95 (268)
T 3ico_A 53 ARGQALIVLTGG-GNGIALLRYLSAQAQQIEWSKVHLFWGDERY 95 (268)
T ss_dssp HHSCEEEEECCS-HHHHHHHHHHHHHGGGSCGGGEEEEESEEEC
T ss_pred hcCceEEEEecC-CchhHHHHHHHHHhhhhhheeeEEeeccccc
Confidence 367899999999 4777888877653322334678888887787
No 53
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=54.64 E-value=25 Score=25.00 Aligned_cols=70 Identities=19% Similarity=0.119 Sum_probs=42.9
Q ss_pred HHHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe
Q 031219 44 QRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA 121 (163)
Q Consensus 44 ~Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~ 121 (163)
+....++..||++|... .|+|+ =++|++.. .+|+|..+.. .+. ..+ . .....+.-.
T Consensus 107 ~~~~~~~~~ad~~l~ps~~e~~~~--~~~Ea~a~------G~PvI~~~~~----~~~----e~~-~-----~~~g~~~~~ 164 (200)
T 2bfw_A 107 EFVRELYGSVDFVIIPSYFEPFGL--VALEAMCL------GAIPIASAVG----GLR----DII-T-----NETGILVKA 164 (200)
T ss_dssp HHHHHHHTTCSEEEECCSCCSSCH--HHHHHHHT------TCEEEEESCH----HHH----HHC-C-----TTTCEEECT
T ss_pred HHHHHHHHHCCEEEECCCCCCccH--HHHHHHHC------CCCEEEeCCC----ChH----HHc-C-----CCceEEecC
Confidence 34567788899988744 34454 36777754 8999987653 122 222 1 122333444
Q ss_pred CCHHHHHHHHHhhc
Q 031219 122 QTAHELICKLEEYV 135 (163)
Q Consensus 122 ~~~ee~~~~l~~~~ 135 (163)
+|++++.+.|.+..
T Consensus 165 ~~~~~l~~~i~~l~ 178 (200)
T 2bfw_A 165 GDPGELANAILKAL 178 (200)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 59999988887754
No 54
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=53.05 E-value=54 Score=25.67 Aligned_cols=44 Identities=32% Similarity=0.370 Sum_probs=31.7
Q ss_pred HHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcc
Q 031219 50 ARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 94 (163)
Q Consensus 50 ~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw 94 (163)
-+...+.|+|+|| .|...+++.+.-..-+..-..+.+++.+-||
T Consensus 36 ~~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (251)
T 3tx2_A 36 AERGKAMIVLTGG-GTGIALLKHLRDVASGLDWTNVHVFWGDDRY 79 (251)
T ss_dssp HHHSCEEEEECCS-HHHHHHHHHHHHHHTTSCGGGEEEEESEEES
T ss_pred HhCCCEEEEECCC-chHHHHHHHHHhhccCCCCceeEEEeeeecc
Confidence 3467899999999 4777788777653322345678888887777
No 55
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=53.02 E-value=28 Score=28.37 Aligned_cols=71 Identities=25% Similarity=0.204 Sum_probs=42.9
Q ss_pred HHHHHHHHhcCEEEEcc---C-CCCCHHHHHHHHHHHHcCCCCCcEEEE-ecCCcchHHHHHHHHHHHcCCCCccccccE
Q 031219 44 QRKAEMARQADAFIALP---G-GYGTLEELLEVITWAQLGIHDKPVGLL-NVDGYYNSLLSFIDKAVDEGFIAPAARYII 118 (163)
Q Consensus 44 ~Rk~~m~~~sDafIalP---G-G~GTLdEl~e~~~~~qlg~~~kPivll-n~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i 118 (163)
+....+...||+|++.| + |--+ +.|+++. .+|||.- +.. -+..+.+ .+.+.| .+
T Consensus 269 ~dl~~~y~~aDv~vl~ss~~e~gg~~---~lEAmA~------G~PVI~~~~~~-~~~e~~~---~~~~~G--------~l 327 (374)
T 2xci_A 269 GILKELYPVGKIAIVGGTFVNIGGHN---LLEPTCW------GIPVIYGPYTH-KVNDLKE---FLEKEG--------AG 327 (374)
T ss_dssp SCHHHHGGGEEEEEECSSSSSSCCCC---CHHHHTT------TCCEEECSCCT-TSHHHHH---HHHHTT--------CE
T ss_pred HHHHHHHHhCCEEEECCcccCCCCcC---HHHHHHh------CCCEEECCCcc-ChHHHHH---HHHHCC--------CE
Confidence 34466788899988743 2 2233 5666643 8999963 222 2344433 333333 45
Q ss_pred EEeCCHHHHHHHHHhhc
Q 031219 119 VSAQTAHELICKLEEYV 135 (163)
Q Consensus 119 ~~~~~~ee~~~~l~~~~ 135 (163)
..++|++++.+.|.+..
T Consensus 328 ~~~~d~~~La~ai~~ll 344 (374)
T 2xci_A 328 FEVKNETELVTKLTELL 344 (374)
T ss_dssp EECCSHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHH
Confidence 66689999888887754
No 56
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=49.29 E-value=32 Score=28.51 Aligned_cols=75 Identities=12% Similarity=0.108 Sum_probs=43.7
Q ss_pred eEEecCCH-HHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCcc
Q 031219 35 EVKAVSGM-HQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPA 113 (163)
Q Consensus 35 ~li~~~~m-~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~ 113 (163)
.+.+++.+ ......++..||++|.=. |++. .|++.+ .+|+++....+-|..+ ++.|
T Consensus 283 ~v~l~~~l~~~~~~~l~~~ad~vv~~S---Gg~~--~EA~a~------g~PvV~~~~~~~~~e~-------v~~g----- 339 (403)
T 3ot5_A 283 RIHLIEPLDAIDFHNFLRKSYLVFTDS---GGVQ--EEAPGM------GVPVLVLRDTTERPEG-------IEAG----- 339 (403)
T ss_dssp TEEEECCCCHHHHHHHHHHEEEEEECC---HHHH--HHGGGT------TCCEEECCSSCSCHHH-------HHHT-----
T ss_pred CEEEeCCCCHHHHHHHHHhcCEEEECC---ccHH--HHHHHh------CCCEEEecCCCcchhh-------eeCC-----
Confidence 35555555 356777889999876433 4444 455643 8999998433335432 2222
Q ss_pred ccccEEEeCCHHHHHHHHHhh
Q 031219 114 ARYIIVSAQTAHELICKLEEY 134 (163)
Q Consensus 114 ~~~~i~~~~~~ee~~~~l~~~ 134 (163)
..+.+-.|++++.+.+.+.
T Consensus 340 --~~~lv~~d~~~l~~ai~~l 358 (403)
T 3ot5_A 340 --TLKLIGTNKENLIKEALDL 358 (403)
T ss_dssp --SEEECCSCHHHHHHHHHHH
T ss_pred --cEEEcCCCHHHHHHHHHHH
Confidence 1222334888887777654
No 57
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=47.46 E-value=59 Score=25.77 Aligned_cols=71 Identities=17% Similarity=0.197 Sum_probs=43.5
Q ss_pred HHHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe
Q 031219 44 QRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA 121 (163)
Q Consensus 44 ~Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~ 121 (163)
+....++..||++|.-. .|+|+ =++|++.. .+|+|..+..|.-+ ++.......+.-.
T Consensus 276 ~~~~~~~~~adv~v~ps~~e~~~~--~~~EAma~------G~PvI~~~~~~~~e-------------~v~~~~~g~~~~~ 334 (394)
T 2jjm_A 276 DNVAELLAMSDLMLLLSEKESFGL--VLLEAMAC------GVPCIGTRVGGIPE-------------VIQHGDTGYLCEV 334 (394)
T ss_dssp SCTHHHHHTCSEEEECCSCCSCCH--HHHHHHHT------TCCEEEECCTTSTT-------------TCCBTTTEEEECT
T ss_pred hhHHHHHHhCCEEEeccccCCCch--HHHHHHhc------CCCEEEecCCChHH-------------HhhcCCceEEeCC
Confidence 33456778899888542 45565 46777754 89999988654321 2222223333334
Q ss_pred CCHHHHHHHHHhhc
Q 031219 122 QTAHELICKLEEYV 135 (163)
Q Consensus 122 ~~~ee~~~~l~~~~ 135 (163)
.|++++.+.|.+..
T Consensus 335 ~d~~~la~~i~~l~ 348 (394)
T 2jjm_A 335 GDTTGVADQAIQLL 348 (394)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 58999888887653
No 58
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.44 E-value=7.5 Score=31.73 Aligned_cols=32 Identities=28% Similarity=0.180 Sum_probs=23.7
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEe
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 89 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln 89 (163)
.++..||.+|. -+|.+|+.|++ +. .+|+|++.
T Consensus 248 ~~l~~aDlvI~-raG~~Tv~E~~---a~------G~P~Ilip 279 (365)
T 3s2u_A 248 AAYAWADLVIC-RAGALTVSELT---AA------GLPAFLVP 279 (365)
T ss_dssp HHHHHCSEEEE-CCCHHHHHHHH---HH------TCCEEECC
T ss_pred hhhccceEEEe-cCCcchHHHHH---Hh------CCCeEEec
Confidence 46788998775 56688987765 33 89999874
No 59
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=47.38 E-value=29 Score=28.55 Aligned_cols=53 Identities=9% Similarity=0.100 Sum_probs=36.2
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHHH
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFIDK 103 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~~ 103 (163)
..+..|+|||+= |.=||+|-..++++.-. ..+||||+.+- .--.|...+++..
T Consensus 70 ~~~~~dG~VItH-GTDTmeeTA~~Ls~ll~-~~~kPVVlTGAqrP~~~~~sDg~~NL~~A 127 (328)
T 1wls_A 70 EVWEYDGIVITH-GTDTMAYSASMLSFMLR-NPPIPIVLTGSMLPITEKNSDAPFNLRTA 127 (328)
T ss_dssp HTTTCSEEEEEC-CGGGHHHHHHHHHHHEE-SCSSEEEEECCSSCTTSSSCSHHHHHHHH
T ss_pred HhccCCeEEEEc-CCchHHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCCchHHHHHHH
Confidence 334579999985 57899999999885322 35899999753 2234556665554
No 60
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=47.05 E-value=60 Score=25.34 Aligned_cols=44 Identities=27% Similarity=0.234 Sum_probs=31.4
Q ss_pred HHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcc
Q 031219 50 ARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 94 (163)
Q Consensus 50 ~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw 94 (163)
-+...+.|+|+|| .|...+++.+.-..-+..-+.+.+++.+-||
T Consensus 36 ~~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (248)
T 3oc6_A 36 GERGQATIVLTGG-GTGIGLLKRVRERSGEIDWSKVHIYWGDERF 79 (248)
T ss_dssp HHHSCEEEEECCS-HHHHHHHHHHHHTGGGSCGGGEEEEESEEEC
T ss_pred HhCCCEEEEECCC-ccHHHHHHHHHhhccCCCcceEEEEEeeecc
Confidence 3467899999999 4878888887753222334668888877777
No 61
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=46.61 E-value=16 Score=29.70 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=24.9
Q ss_pred HhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEe
Q 031219 51 RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 89 (163)
Q Consensus 51 ~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln 89 (163)
+..|.+ +.-||=||+.|+...+.-.. ...+.|+.+++
T Consensus 81 ~~~d~v-vv~GGDGTl~~v~~~l~~~~-~~~~~plgiiP 117 (332)
T 2bon_A 81 FGVATV-IAGGGDGTINEVSTALIQCE-GDDIPALGILP 117 (332)
T ss_dssp HTCSEE-EEEESHHHHHHHHHHHHHCC-SSCCCEEEEEE
T ss_pred cCCCEE-EEEccchHHHHHHHHHhhcc-cCCCCeEEEec
Confidence 445655 45699999999998885321 12467888775
No 62
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=46.10 E-value=32 Score=26.67 Aligned_cols=44 Identities=18% Similarity=0.293 Sum_probs=33.1
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcc
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 94 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw 94 (163)
.+.+...+.|+|+|| .|...+++.+.- -+.--+.+.+++.+-||
T Consensus 29 ~i~~~~~~~l~lsgG-stp~~~y~~L~~--~~i~w~~v~~f~~DEr~ 72 (232)
T 3lhi_A 29 ALDEKGGAVLAVSGG-RSPIAFFNALSQ--KDLDWKNVGITLADERI 72 (232)
T ss_dssp HHHHHSCEEEEECCS-STTHHHHHHHHT--SCCCGGGEEEEESEEES
T ss_pred HHHhCCCEEEEEeCC-CCHHHHHHHHHh--cCCCchheEEEEeeecc
Confidence 445678899999999 588899988863 23445677888877777
No 63
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=45.56 E-value=46 Score=27.54 Aligned_cols=49 Identities=20% Similarity=0.210 Sum_probs=34.5
Q ss_pred HhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHH
Q 031219 51 RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFID 102 (163)
Q Consensus 51 ~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~ 102 (163)
+..|+|||+= |.=||+|-...+++.- ..+|||||.+- .-..|...+++.
T Consensus 87 ~~~dGvVItH-GTDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~ 140 (334)
T 3nxk_A 87 EGIDGVVITH-GTDTMEETAYFLNLTI--KSDKPVVLVGAMRPSTAISADGPKNLYN 140 (334)
T ss_dssp TTCCEEEEEC-CSTTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred cCCCeEEEEC-CCchHHHHHHHHHHHc--CCCCCEEEECCCCCCCCCCchHHHHHHH
Confidence 3568888775 5799999999998753 45899999862 123444555544
No 64
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=44.61 E-value=48 Score=27.62 Aligned_cols=56 Identities=14% Similarity=0.185 Sum_probs=37.1
Q ss_pred HHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHH
Q 031219 45 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFID 102 (163)
Q Consensus 45 Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~ 102 (163)
|-....+..|+|||+= |.=||+|-..++++.- ...+|||||.+- .--.|...+++.
T Consensus 94 ~I~~~~~~~dG~VItH-GTDTmeeTA~~Ls~~l-~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 154 (358)
T 2him_A 94 DIKAHYDDYDGFVILH-GTDTMAYTASALSFML-ENLGKPVIVTGSQIPLAELRSDGQINLLN 154 (358)
T ss_dssp HHHHHGGGCSEEEEEC-CSTTHHHHHHHHHHHE-ETCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred HHHHHHhcCCeEEEec-CchHHHHHHHHHHHHH-hcCCCCEEEeCCCCCCcCCCcchHHHHHH
Confidence 3333344679999985 5789999999998742 224899999753 123444555544
No 65
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=44.35 E-value=57 Score=25.68 Aligned_cols=70 Identities=21% Similarity=0.293 Sum_probs=43.6
Q ss_pred HHHHHHHHhcCEEEEc---cCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEE
Q 031219 44 QRKAEMARQADAFIAL---PGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVS 120 (163)
Q Consensus 44 ~Rk~~m~~~sDafIal---PGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~ 120 (163)
+....++..||++|.. ..|+|+ =++|++.. .+|+|..+.. .+. .++.+| ....+.-
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~--~~~Ea~a~------G~PvI~~~~~----~~~----e~i~~~-----~~g~~~~ 332 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGI--VLVEAMAA------GTAVVASDLD----AFR----RVLADG-----DAGRLVP 332 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCH--HHHHHHHH------TCEEEECCCH----HHH----HHHTTT-----TSSEECC
T ss_pred HHHHHHHHHCCEEEecCCCCCCCch--HHHHHHHc------CCCEEEecCC----cHH----HHhcCC-----CceEEeC
Confidence 4457788999999876 345664 47778865 8999987652 222 233221 1222233
Q ss_pred eCCHHHHHHHHHhh
Q 031219 121 AQTAHELICKLEEY 134 (163)
Q Consensus 121 ~~~~ee~~~~l~~~ 134 (163)
.+|++++.+.|.+.
T Consensus 333 ~~d~~~l~~~i~~l 346 (406)
T 2gek_A 333 VDDADGMAAALIGI 346 (406)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 37888888877664
No 66
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=44.08 E-value=63 Score=25.87 Aligned_cols=71 Identities=21% Similarity=0.245 Sum_probs=42.8
Q ss_pred HHHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEe
Q 031219 44 QRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA 121 (163)
Q Consensus 44 ~Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~ 121 (163)
+....++..||++|.-. .|+|+ =++|++.. .+|||..+..|. . .++.+ .....+.-.
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~--~~~Eama~------G~PvI~~~~~~~-~-------e~i~~-----~~~g~~~~~ 375 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGL--VAMEAQAS------GTPVIAARVGGL-P-------IAVAE-----GETGLLVDG 375 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCH--HHHHHHHT------TCCEEEESCTTH-H-------HHSCB-----TTTEEEESS
T ss_pred HHHHHHHHhCCEEEECccccCCch--HHHHHHHc------CCCEEecCCCCh-h-------HHhhC-----CCcEEECCC
Confidence 45667788999987542 35564 36677754 899999876432 1 12221 112233333
Q ss_pred CCHHHHHHHHHhhc
Q 031219 122 QTAHELICKLEEYV 135 (163)
Q Consensus 122 ~~~ee~~~~l~~~~ 135 (163)
+|++++.+.|.+..
T Consensus 376 ~d~~~la~~i~~l~ 389 (438)
T 3c48_A 376 HSPHAWADALATLL 389 (438)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 58898888887653
No 67
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=44.04 E-value=39 Score=26.22 Aligned_cols=44 Identities=18% Similarity=0.259 Sum_probs=33.1
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcc
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 94 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw 94 (163)
.+.+...+.|+|+|| .|...+++.+.- -+.--+.+.+++.+-||
T Consensus 32 ~i~~~~~~~l~lsgG-stp~~~y~~L~~--~~idw~~v~~f~~DEr~ 75 (233)
T 3nwp_A 32 AVDARGKASLVVSGG-STPLKLFQLLSM--KSIDWSDVYITLADERW 75 (233)
T ss_dssp HHHHHSCEEEEECCS-STTHHHHHHHHH--CCSCGGGEEEEESEEES
T ss_pred HHHhCCCEEEEEcCC-CCHHHHHHHHHh--cCCChhHeEEEeCeecc
Confidence 345678899999999 588888888863 33445678888877777
No 68
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=42.18 E-value=49 Score=28.49 Aligned_cols=49 Identities=14% Similarity=0.124 Sum_probs=35.7
Q ss_pred hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHHH
Q 031219 52 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFIDK 103 (163)
Q Consensus 52 ~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~~ 103 (163)
..|+|||+= |.=||+|-..++++.- ..+|||||.+- .--.|...+++..
T Consensus 167 ~~DG~VItH-GTDTMeeTA~~Lsl~l--~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 220 (435)
T 2d6f_A 167 GADGVVVAH-GTDTMHYTSAALSFML--RTPVPVVFTGAQRSSDRPSSDASLNIQCS 220 (435)
T ss_dssp TCSEEEEEC-CTTTHHHHHHHHHHHE--ECSSCEEEECCSSCTTSTTCTHHHHHHHH
T ss_pred CCCeEEEEc-CcchHHHHHHHHHHHh--CCCCCEEEECCCCCCCCCCcchHHHHHHH
Confidence 579999985 5789999999998864 45899999753 1234455565553
No 69
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=41.84 E-value=90 Score=23.62 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=27.4
Q ss_pred cCEEEEccCCCCCHHHHHHHHHHH--HcCCCCCcEEEEecCCcc
Q 031219 53 ADAFIALPGGYGTLEELLEVITWA--QLGIHDKPVGLLNVDGYY 94 (163)
Q Consensus 53 sDafIalPGG~GTLdEl~e~~~~~--qlg~~~kPivlln~~Gfw 94 (163)
.+..|+|+|| .|+.++++.+.-. +-....+.+-+++.+++|
T Consensus 28 ~~~~i~lsgG-~T~~~~~~~L~~~~~~~~~~~~~v~v~~lder~ 70 (242)
T 2bkx_A 28 PDAVLGLATG-GTPEGTYRQLIRLHQTENLSFQNITTVNLDEYA 70 (242)
T ss_dssp TTCEEEECCS-STTHHHHHHHHHHHHHSCCCCTTCEEEESEEET
T ss_pred CCeEEEECCC-CCHHHHHHHHHHHhhccCCChhheEEEeCcccc
Confidence 4578899888 6888888888632 112334566667666777
No 70
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=41.19 E-value=13 Score=25.45 Aligned_cols=44 Identities=11% Similarity=0.267 Sum_probs=32.0
Q ss_pred cCCcchHHHHHHHHHHHcCCCCccccccEEE-----eCCHHHHHHHHHhhcCC
Q 031219 90 VDGYYNSLLSFIDKAVDEGFIAPAARYIIVS-----AQTAHELICKLEEYVPK 137 (163)
Q Consensus 90 ~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~-----~~~~ee~~~~l~~~~~~ 137 (163)
.+.+.+.++..+++..+. |.-.++|+. -++|+++++.+++|++.
T Consensus 29 ~E~e~d~ll~~fe~iteH----P~gSDLIfyP~~~~e~SPEgIv~~IKeWRa~ 77 (94)
T 3u43_A 29 TEEDDNKLVREFERLTEH----PDGSDLIYYPRDDREDSPEGIVKEIKEWRAA 77 (94)
T ss_dssp SHHHHHHHHHHHHHHHCC----TTTTHHHHSCCTTSCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCC----CCccCeeeeCCCCCCCCHHHHHHHHHHHHHH
Confidence 455777788877776532 444667766 36899999999999764
No 71
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=40.90 E-value=1.2e+02 Score=24.14 Aligned_cols=87 Identities=17% Similarity=0.018 Sum_probs=45.5
Q ss_pred CHHHHHHHHHH--hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCc----c-
Q 031219 41 GMHQRKAEMAR--QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAP----A- 113 (163)
Q Consensus 41 ~m~~Rk~~m~~--~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~----~- 113 (163)
++.+=.+.+.+ ..++++..--++|+.+|.+..+--. ..+|||+++.. |...+--.. +-..|-+-. .
T Consensus 186 ~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~-G~~~~~~~~---~~Htgal~~~~~g~~ 258 (288)
T 1oi7_A 186 TFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD---HMKKPVVGFIG-GRSAPKGKR---MGHAGAIIMGNVGTP 258 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH---HCCSCEEEEES-CC---------------------CCSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEe-cCCCCcccc---CcchhhcccCCCCCH
Confidence 34444444444 3557788888888887755443321 34899999864 444421111 111122210 0
Q ss_pred -------ccccEEEeCCHHHHHHHHHhh
Q 031219 114 -------ARYIIVSAQTAHELICKLEEY 134 (163)
Q Consensus 114 -------~~~~i~~~~~~ee~~~~l~~~ 134 (163)
...-+..+++++|+.+.+++.
T Consensus 259 ~~~~aa~~~aGv~~~~~~~el~~~~~~~ 286 (288)
T 1oi7_A 259 ESKLRAFAEAGIPVADTIDEIVELVKKA 286 (288)
T ss_dssp HHHHHHHHHHTCCBCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeCCHHHHHHHHHHH
Confidence 223467889999999888754
No 72
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=40.63 E-value=27 Score=27.91 Aligned_cols=38 Identities=18% Similarity=0.102 Sum_probs=24.7
Q ss_pred HhcCEEEEccCCC-CCHHHHHHHHHHHHcCCCCCcEEEEecCCc
Q 031219 51 RQADAFIALPGGY-GTLEELLEVITWAQLGIHDKPVGLLNVDGY 93 (163)
Q Consensus 51 ~~sDafIalPGG~-GTLdEl~e~~~~~qlg~~~kPivlln~~Gf 93 (163)
..+|++|+|.||. +.+++..+.+.. + ..|+++-+..|.
T Consensus 35 ~~~D~IVVLG~~~~~Rl~~A~~L~~~---g--~~~lIvSGG~g~ 73 (266)
T 3ca8_A 35 YQADCVILAGNAVMPTIDAACKIARD---Q--QIPLLISGGIGH 73 (266)
T ss_dssp CCCSEEEEESCCCHHHHHHHHHHHHH---H--TCCEEEECCSST
T ss_pred CCCCEEEECCCCchHHHHHHHHHHHc---C--CCcEEEECCCCC
Confidence 3699999999986 566665555532 2 237776665444
No 73
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=40.41 E-value=61 Score=26.58 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=34.5
Q ss_pred hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHHH
Q 031219 52 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFIDK 103 (163)
Q Consensus 52 ~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~~ 103 (163)
..|+|||+= |.=||+|-..++++.- . .+|||||.+- .--.|...+++..
T Consensus 85 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 138 (327)
T 1o7j_A 85 DVDGVVITH-GTDTVEESAYFLHLTV-K-SDKPVVFVAAMRPATAISADGPMNLLEA 138 (327)
T ss_dssp TCCEEEEEC-CSTTHHHHHHHHHHHC-C-CCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEec-CchhHHHHHHHHHHHh-C-CCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 368999985 5899999999998753 3 6899999753 1234445555543
No 74
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=40.40 E-value=65 Score=26.59 Aligned_cols=70 Identities=14% Similarity=0.048 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEE
Q 031219 43 HQRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVS 120 (163)
Q Consensus 43 ~~Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~ 120 (163)
.+....+...||+||... -|+|.. ++|+++. .+|||. +..|.. ++ +.+ .....+.-
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~--~lEAmA~------G~PVV~-~~~g~~-e~-------v~~-----~~~G~lv~ 362 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYP--PLEMAHF------GLRVIT-NKYENK-DL-------SNW-----HSNIVSLE 362 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSH--HHHHHHT------TCEEEE-ECBTTB-CG-------GGT-----BTTEEEES
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcH--HHHHHhC------CCcEEE-eCCCcc-hh-------hhc-----CCCEEEeC
Confidence 455667889999998754 478863 6788754 899998 655532 22 221 12223344
Q ss_pred eCCHHHHHHHHHhh
Q 031219 121 AQTAHELICKLEEY 134 (163)
Q Consensus 121 ~~~~ee~~~~l~~~ 134 (163)
..|++++.+.|.+.
T Consensus 363 ~~d~~~la~ai~~l 376 (413)
T 2x0d_A 363 QLNPENIAETLVEL 376 (413)
T ss_dssp SCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 57888887777653
No 75
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=40.10 E-value=14 Score=28.32 Aligned_cols=88 Identities=16% Similarity=0.197 Sum_probs=55.2
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHH----HHHcCCCCCcEEEEec--CCcchH--HHHHHHHHHHcCC--CCccccccE
Q 031219 49 MARQADAFIALPGGYGTLEELLEVIT----WAQLGIHDKPVGLLNV--DGYYNS--LLSFIDKAVDEGF--IAPAARYII 118 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~----~~qlg~~~kPivlln~--~Gfw~~--l~~~l~~~~~~gf--i~~~~~~~i 118 (163)
+...+|++|+.|=..+|+.-+..-++ ....-..++|+++.-- ...|.+ .++-++.+.+.|+ +++.....+
T Consensus 78 l~~~aD~~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f 157 (194)
T 1p3y_1 78 IGRWADIYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAF 157 (194)
T ss_dssp HHHHCSEEEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEECCCBCCC--
T ss_pred ccccCCEEEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEECCCCCccc
Confidence 34679999999999999887753221 0000015799998732 236665 2344666777774 444443122
Q ss_pred ----------EEeCCHHHHHHHHHhhcC
Q 031219 119 ----------VSAQTAHELICKLEEYVP 136 (163)
Q Consensus 119 ----------~~~~~~ee~~~~l~~~~~ 136 (163)
.-..+++++++++.+...
T Consensus 158 ~lacg~~g~~g~~~~~~~iv~~v~~~l~ 185 (194)
T 1p3y_1 158 EIATGTRKPNRGLITPDKALLAIEKGFK 185 (194)
T ss_dssp ----------CBCCCHHHHHHHHHHHCC
T ss_pred ccccCCcCcCCCCCCHHHHHHHHHHHhc
Confidence 355789999999987653
No 76
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=38.68 E-value=59 Score=26.69 Aligned_cols=49 Identities=18% Similarity=0.218 Sum_probs=34.9
Q ss_pred hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHHH
Q 031219 52 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFIDK 103 (163)
Q Consensus 52 ~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~~ 103 (163)
..|+|||+= |.=||+|-..++++.- . .+|||||.+- .--.|...+++..
T Consensus 82 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 135 (331)
T 1agx_A 82 SVNGVVITH-GTDTMEETAFFLNLVV-H-TDKPIVLVGSMRPSTALSADGPLNLYSA 135 (331)
T ss_dssp TCCEEEEEC-CGGGHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEec-CcchHHHHHHHHHHHc-C-CCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 368999885 6899999999998753 3 6899999853 2234455665554
No 77
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=38.25 E-value=71 Score=26.23 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=34.5
Q ss_pred hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHHH
Q 031219 52 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFIDK 103 (163)
Q Consensus 52 ~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~~ 103 (163)
..|+|||+= |.=||+|-..++++.- . .+|||||.+- .--.|...+++..
T Consensus 85 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 138 (332)
T 2wlt_A 85 RIQGVVITH-GTDTLEESAYFLNLVL-H-STKPVVLVGAMRNASSLSADGALNLYEA 138 (332)
T ss_dssp TCCEEEEEC-CSSSHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEec-CchhHHHHHHHHHHHh-C-CCCCEEEECCCCCCCCCCcchHHHHHHH
Confidence 368999985 5899999999998753 3 6899999753 1234445555543
No 78
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=38.00 E-value=10 Score=29.48 Aligned_cols=79 Identities=22% Similarity=0.193 Sum_probs=50.7
Q ss_pred cCEEEEccCCCCCHHHHHHHHH-------H-HHcCCCCCcEEEEecCCcchHH--HHHHHHHHHcCCC-CccccccEEEe
Q 031219 53 ADAFIALPGGYGTLEELLEVIT-------W-AQLGIHDKPVGLLNVDGYYNSL--LSFIDKAVDEGFI-APAARYIIVSA 121 (163)
Q Consensus 53 sDafIalPGG~GTLdEl~e~~~-------~-~qlg~~~kPivlln~~Gfw~~l--~~~l~~~~~~gfi-~~~~~~~i~~~ 121 (163)
+|++||.|=..+||.-+..-++ + ..+ ..++|++++--+ .|..- ++-+..+.+.|.+ =+.....+.--
T Consensus 95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~L-k~~~plvl~Pae-m~~~~~~~~Nm~~L~~~G~~iipp~~g~ya~p 172 (209)
T 3zqu_A 95 PNAMVICPCSTGTLSAVATGACNNLIERAADVAL-KERRPLVLVPRE-APFSSIHLENMLKLSNLGAVILPAAPGFYHQP 172 (209)
T ss_dssp CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHH-HHTCCEEEEECC-SSCCHHHHHHHHHHHHHTCEECCSCCCCTTCC
T ss_pred cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHH-hcCCcEEEEEcc-cccCHHHHHHHHHHHHCCCEEeCCCcccccCC
Confidence 8999999999999988764222 0 111 237999998654 55442 2335566666742 22234445566
Q ss_pred CCHHHHHHHHHh
Q 031219 122 QTAHELICKLEE 133 (163)
Q Consensus 122 ~~~ee~~~~l~~ 133 (163)
.++||+++++..
T Consensus 173 ~~iediv~~vv~ 184 (209)
T 3zqu_A 173 QSVEDLVDFVVA 184 (209)
T ss_dssp CSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 789999887754
No 79
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=37.67 E-value=35 Score=23.70 Aligned_cols=37 Identities=30% Similarity=0.328 Sum_probs=26.1
Q ss_pred HHhcCEEEEccCCCCCHH-----HHHHHHHHHHcCCCCCcEEEEecCC
Q 031219 50 ARQADAFIALPGGYGTLE-----ELLEVITWAQLGIHDKPVGLLNVDG 92 (163)
Q Consensus 50 ~~~sDafIalPGG~GTLd-----El~e~~~~~qlg~~~kPivlln~~G 92 (163)
++.||++|+|.|=.-+-. |+-.+. ..+||++.+...|
T Consensus 36 I~~~~~vIvL~G~~t~~s~wv~~EI~~A~------~~gkpIigV~~~g 77 (111)
T 1eiw_A 36 PEDADAVIVLAGLWGTRRDEILGAVDLAR------KSSKPIITVRPYG 77 (111)
T ss_dssp SSSCSEEEEEGGGTTTSHHHHHHHHHHHT------TTTCCEEEECCSS
T ss_pred cccCCEEEEEeCCCcCCChHHHHHHHHHH------HcCCCEEEEEcCC
Confidence 567899999998776433 333222 4699999998765
No 80
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=36.55 E-value=74 Score=26.06 Aligned_cols=49 Identities=20% Similarity=0.259 Sum_probs=34.9
Q ss_pred hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHHH
Q 031219 52 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFIDK 103 (163)
Q Consensus 52 ~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~~ 103 (163)
..|+|||+= |.=||+|-..++++.- . .+|||||.+- .--.|...+++..
T Consensus 83 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 136 (330)
T 1wsa_A 83 ETEAVIITH-GTDTMEETAFFLNLTV-K-SQKPVVLVGAMRPGSSMSADGPMNLYNA 136 (330)
T ss_dssp TCCCEEEEC-CSSSHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEEc-CcchHHHHHHHHHHHc-C-CCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 368999985 5799999999998753 3 6899999753 1234445565554
No 81
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=36.20 E-value=1.9e+02 Score=24.10 Aligned_cols=70 Identities=20% Similarity=0.247 Sum_probs=44.2
Q ss_pred cCE-EEEccCCCCCHHHHHHHHHHH--HcCCCCCcEEEEecCC-cchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHH
Q 031219 53 ADA-FIALPGGYGTLEELLEVITWA--QLGIHDKPVGLLNVDG-YYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELI 128 (163)
Q Consensus 53 sDa-fIalPGG~GTLdEl~e~~~~~--qlg~~~kPivlln~~G-fw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~ 128 (163)
.|+ ||...||+=..+++.+.+.-. .++ ++||+++- ..| -++.-.+ .+.+.| =.++.++|++++.
T Consensus 311 v~~ilvni~ggi~~~~~vA~gii~a~~~~~-~~~pivvr-l~G~n~~~g~~---~l~~~g-------~~~~~~~~~~~aa 378 (388)
T 2nu8_B 311 VKAVLVNIFGGIVRCDLIADGIIGAVAEVG-VNVPVVVR-LEGNNAELGAK---KLADSG-------LNIIAAKGLTDAA 378 (388)
T ss_dssp CCEEEEEEESCSSCHHHHHHHHHHHHHHHT-CCSCEEEE-EESTTHHHHHH---HHHTTC-------SSEEECSSHHHHH
T ss_pred CCEEEEEecCCcCCchHHHHHHHHHHHhcC-CCCeEEEE-eCCCCHHHHHH---HHHHCC-------CceecCCCHHHHH
Confidence 455 444569999999998876632 332 58999983 333 2333332 232333 2566789999999
Q ss_pred HHHHhh
Q 031219 129 CKLEEY 134 (163)
Q Consensus 129 ~~l~~~ 134 (163)
+.+.+.
T Consensus 379 ~~~v~~ 384 (388)
T 2nu8_B 379 QQVVAA 384 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987665
No 82
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=36.13 E-value=79 Score=27.20 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=35.7
Q ss_pred hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHHH
Q 031219 52 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFIDK 103 (163)
Q Consensus 52 ~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~~ 103 (163)
..|+|||+= |.=||+|-..++++. +...+|||||.+- .--.|...+++..
T Consensus 168 ~~DG~VItH-GTDTMeeTA~~Lsl~-l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 222 (438)
T 1zq1_A 168 GDYGVVVAH-GTDTMGYTAAALSFM-LRNLGKPVVLVGAQRSSDRPSSDAAMNLICS 222 (438)
T ss_dssp TCSEEEEEC-CSSSHHHHHHHHHHH-EESCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCeEEEec-CchhHHHHHHHHHHH-HhCCCCCEEEeCCCCCCCCCCcchHHHHHHH
Confidence 579999985 588999999999874 3345899999753 2234556665554
No 83
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=35.96 E-value=37 Score=29.46 Aligned_cols=65 Identities=22% Similarity=0.279 Sum_probs=38.4
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHcCC-CCCcEEEEe-cCCcchHHHHHHHHHHHc-CCCCcccccc--EEEeCCHHHHHH
Q 031219 55 AFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLN-VDGYYNSLLSFIDKAVDE-GFIAPAARYI--IVSAQTAHELIC 129 (163)
Q Consensus 55 afIalPGG~GTLdEl~e~~~~~qlg~-~~kPivlln-~~Gfw~~l~~~l~~~~~~-gfi~~~~~~~--i~~~~~~ee~~~ 129 (163)
++|+|-||.||= +|. .+||++=+. ..-|.+.+++.+..+-.. |. .... +....+.+.+.+
T Consensus 81 ~vviLAGGlGTR-----------Lg~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~----~ip~vimts~~t~e~t~~ 145 (469)
T 2icy_A 81 VVLKLNGGLGTT-----------MGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGC----KVPLVLMNSFNTHDDTHK 145 (469)
T ss_dssp EEEEEECCBSGG-----------GTCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSC----CCCEEEEECTTTHHHHHH
T ss_pred eEEEEcCCcccc-----------CCCCCCccccccCCCCCHHHHHHHHHHHHHHhcCC----CccEEEEeCCCCHHHHHH
Confidence 699999999991 243 578887554 334666666655554211 31 1122 233344778888
Q ss_pred HHHhh
Q 031219 130 KLEEY 134 (163)
Q Consensus 130 ~l~~~ 134 (163)
++++.
T Consensus 146 ~f~~~ 150 (469)
T 2icy_A 146 IVEKY 150 (469)
T ss_dssp HHGGG
T ss_pred HHHhc
Confidence 88764
No 84
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=35.15 E-value=93 Score=24.67 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=49.3
Q ss_pred EecCCH--HHHHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCC--
Q 031219 37 KAVSGM--HQRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFI-- 110 (163)
Q Consensus 37 i~~~~m--~~Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi-- 110 (163)
+.+... .+....++..||+||.-. .|+|. =+.|+++ ..+|+|..+..| +. .++.++--
T Consensus 256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~--~~lEAma------~G~PvI~s~~~g----~~----e~v~~~~~~~ 319 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGL--CSAEGAV------LGKPLIISAVGG----AD----DYFSGDCVYK 319 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCH--HHHHHHT------TTCCEEEECCHH----HH----HHSCTTTSEE
T ss_pred eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCc--HHHHHHH------cCCCEEEcCCCC----hH----HHHccCcccc
Confidence 444443 456667889999988743 34443 3677774 489999987542 22 23322210
Q ss_pred -Cc-------ccccc--EEEeCCHHHHHHHHHhhcC
Q 031219 111 -AP-------AARYI--IVSAQTAHELICKLEEYVP 136 (163)
Q Consensus 111 -~~-------~~~~~--i~~~~~~ee~~~~l~~~~~ 136 (163)
+. ..... +.-..|++++.+.| +...
T Consensus 320 i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~ 354 (413)
T 3oy2_A 320 IKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK 354 (413)
T ss_dssp ECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT
T ss_pred cccccccccccccCcceeeCCCCHHHHHHHH-HHhc
Confidence 00 00144 77778999999999 7643
No 85
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=34.71 E-value=1.2e+02 Score=22.92 Aligned_cols=55 Identities=25% Similarity=0.260 Sum_probs=39.9
Q ss_pred HHHHHHHHH-----HhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecC-CcchHHHHHHHH
Q 031219 42 MHQRKAEMA-----RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-GYYNSLLSFIDK 103 (163)
Q Consensus 42 m~~Rk~~m~-----~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~-Gfw~~l~~~l~~ 103 (163)
..+|...+. +..++||+.-|+.+-|-=+.-.++ .+|||-+-+. ++++.+-.++..
T Consensus 47 ~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t-------~~PVIgVP~~~~~l~G~daLlS~ 107 (174)
T 3lp6_A 47 TPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAAT-------PLPVIGVPVPLGRLDGLDSLLSI 107 (174)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHHHC-------SSCEEEEEECCSSGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHHHhcc-------CCCEEEeeCCCCCCCCHHHHHHH
Confidence 355555554 457899999999999988887764 7999987553 677776665443
No 86
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=34.69 E-value=46 Score=25.68 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=32.2
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcc
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 94 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw 94 (163)
+.+...+.|+|+|| .|...+++.+.- -+.--+.+.+++.+-||
T Consensus 29 i~~~~~~~l~LsgG-stp~~~y~~L~~--~~idw~~v~~f~~DEr~ 71 (226)
T 3lwd_A 29 LAKRERALLVVSGG-STPKPFFTSLAA--KALPWARVDVTLADERW 71 (226)
T ss_dssp HTTSSCEEEEECCS-STTHHHHHHHHT--SCSCGGGEEEEESEEES
T ss_pred HHhCCCEEEEEcCC-CCHHHHHHHHHh--cCCCchhEEEEEeeecc
Confidence 34567899999999 588999988863 23345678888877777
No 87
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=34.52 E-value=1.5e+02 Score=24.75 Aligned_cols=71 Identities=17% Similarity=0.097 Sum_probs=44.8
Q ss_pred cCE-EEEccCCCCCHHHHHHHHHH--HHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHH
Q 031219 53 ADA-FIALPGGYGTLEELLEVITW--AQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELIC 129 (163)
Q Consensus 53 sDa-fIalPGG~GTLdEl~e~~~~--~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~ 129 (163)
.|+ ||...||+=..+++.+.+.- ..++ ++||+++--...-++.-.+ .+.+.| =.++.++|++++.+
T Consensus 318 v~~ilvni~ggi~~~d~vA~gii~a~~~~~-~~~Pivvrl~G~n~~~g~~---~L~~~g-------l~~~~~~~~~~Aa~ 386 (395)
T 2fp4_B 318 VEAILVNIFGGIVNCAIIANGITKACRELE-LKVPLVVRLEGTNVHEAQN---ILTNSG-------LPITSAVDLEDAAK 386 (395)
T ss_dssp CCEEEEEEEESSSCHHHHHHHHHHHHHHHT-CCSCEEEEEEETTHHHHHH---HHHHTC-------SCCEECSSHHHHHH
T ss_pred CCEEEEEecCCccCcHHHHHHHHHHHHhcC-CCCeEEEEcCCCCHHHHHH---HHHHCC-------CceEeCCCHHHHHH
Confidence 455 55567999999999887663 2222 5899997432222333333 333334 25667799999999
Q ss_pred HHHhh
Q 031219 130 KLEEY 134 (163)
Q Consensus 130 ~l~~~ 134 (163)
.+.+.
T Consensus 387 ~~v~~ 391 (395)
T 2fp4_B 387 KAVAS 391 (395)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 87664
No 88
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=32.74 E-value=1.2e+02 Score=24.80 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=43.8
Q ss_pred HHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCC----CCccccccEE
Q 031219 46 KAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGF----IAPAARYIIV 119 (163)
Q Consensus 46 k~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gf----i~~~~~~~i~ 119 (163)
...++..||+||.-. .|+|. =++|+++. .+|||..+..| + ..++.+|- ........++
T Consensus 360 ~~~~~~~adv~v~pS~~E~~g~--~~lEAma~------G~PvI~s~~gg----~----~e~v~~~~~~~~~~~~~~G~l~ 423 (485)
T 2qzs_A 360 SHRIMGGADVILVPSRFEPCGL--TQLYGLKY------GTLPLVRRTGG----L----ADTVSDCSLENLADGVASGFVF 423 (485)
T ss_dssp HHHHHHHCSEEEECCSCCSSCS--HHHHHHHH------TCEEEEESSHH----H----HHHCCBCCHHHHHTTCCCBEEE
T ss_pred HHHHHHhCCEEEECCccCCCcH--HHHHHHHC------CCCEEECCCCC----c----cceeccCccccccccccceEEE
Confidence 356788999987643 46676 37777765 89999987642 2 22332210 0000233344
Q ss_pred EeCCHHHHHHHHHhhc
Q 031219 120 SAQTAHELICKLEEYV 135 (163)
Q Consensus 120 ~~~~~ee~~~~l~~~~ 135 (163)
-..|++++.+.|.+..
T Consensus 424 ~~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 424 EDSNAWSLLRAIRRAF 439 (485)
T ss_dssp CSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4468888888877653
No 89
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=32.56 E-value=95 Score=24.50 Aligned_cols=71 Identities=20% Similarity=0.147 Sum_probs=44.0
Q ss_pred HHHHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEE
Q 031219 43 HQRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVS 120 (163)
Q Consensus 43 ~~Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~ 120 (163)
.+....++..||++|... .|+|. =++|+++. .+|+|..+..| +. .++. .. ...+.-
T Consensus 321 ~~~~~~~~~~adv~v~ps~~e~~~~--~~~EAma~------G~Pvi~s~~~~----~~----e~~~-----~~-~g~~~~ 378 (439)
T 3fro_A 321 REFVRELYGSVDFVIIPSYFEPFGL--VALEAMCL------GAIPIASAVGG----LR----DIIT-----NE-TGILVK 378 (439)
T ss_dssp HHHHHHHHTTCSEEEECBSCCSSCH--HHHHHHHT------TCEEEEESSTH----HH----HHCC-----TT-TCEEEC
T ss_pred HHHHHHHHHHCCEEEeCCCCCCccH--HHHHHHHC------CCCeEEcCCCC----cc----eeEE-----cC-ceEEeC
Confidence 344556788899887543 45555 37777754 89999887642 11 2221 11 233444
Q ss_pred eCCHHHHHHHHHhhc
Q 031219 121 AQTAHELICKLEEYV 135 (163)
Q Consensus 121 ~~~~ee~~~~l~~~~ 135 (163)
.+|++++.+.|.+..
T Consensus 379 ~~d~~~la~~i~~ll 393 (439)
T 3fro_A 379 AGDPGELANAILKAL 393 (439)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 469999988887654
No 90
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=32.26 E-value=1.7e+02 Score=22.40 Aligned_cols=92 Identities=12% Similarity=0.004 Sum_probs=55.5
Q ss_pred CCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcC-CCCCcEEEEecC-----------Cc-chHHHHHHHH-HH
Q 031219 40 SGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLLNVD-----------GY-YNSLLSFIDK-AV 105 (163)
Q Consensus 40 ~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg-~~~kPivlln~~-----------Gf-w~~l~~~l~~-~~ 105 (163)
.++..|.+.=++.|+.||++-|--=.-+. ...|...+-- ..++|||.++.+ |- -+.+-++... .+
T Consensus 67 ~tIKrrLReRI~~Sk~vIllIs~~T~~s~-~v~wEIe~Ai~~~~~PII~Vy~~~~~~~~i~~~~g~~~~~~~~~wpk~p~ 145 (189)
T 3hyn_A 67 KTLKPRLHTRLDNSKNIILFLSSITANSR-ALREEMNYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQIKDLWDKLPA 145 (189)
T ss_dssp TTHHHHHHHHHHTEEEEEEECCTTCCCCH-HHHHHHHHHTTTTCCCEEEEETTCCSGGGTBCTTSCBCHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhcCcEEEEEecCccccc-hhHHHHHHHHHhcCCcEEEEECCccccchhhhccccchhhHhhcCCcchh
Confidence 46788888889999999999886533222 3333322222 458999999876 21 2222222221 11
Q ss_pred HcCCCCccccccEEEeCCHHHHHHHHHhh
Q 031219 106 DEGFIAPAARYIIVSAQTAHELICKLEEY 134 (163)
Q Consensus 106 ~~gfi~~~~~~~i~~~~~~ee~~~~l~~~ 134 (163)
-. ++......+++--.++-+...|.++
T Consensus 146 ~r--~~~~~~~~ihVPf~~~~I~~Al~n~ 172 (189)
T 3hyn_A 146 FR--DNMSSVATLHIPCTKSVIISALNNE 172 (189)
T ss_dssp HH--TTGGGSEEEEEESCHHHHHHHHTCG
T ss_pred hh--ccccCCceEEecCCHHHHHHHHhcc
Confidence 10 2223456788888898888888765
No 91
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=31.25 E-value=51 Score=28.77 Aligned_cols=67 Identities=21% Similarity=0.165 Sum_probs=37.7
Q ss_pred CEEEEccCCCCCHHHHHHHHHHHHcCC-CCCcEEEE---ecCCcchHHHHHHHH---HHH--cCCCCccccccE--EEeC
Q 031219 54 DAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLL---NVDGYYNSLLSFIDK---AVD--EGFIAPAARYII--VSAQ 122 (163)
Q Consensus 54 DafIalPGG~GTLdEl~e~~~~~qlg~-~~kPivll---n~~Gfw~~l~~~l~~---~~~--~gfi~~~~~~~i--~~~~ 122 (163)
-++|+|-||.|| .+|. .+||++=+ +..-|.+.+++.|.. +.. .| .......+ ....
T Consensus 103 vavViLAGG~GT-----------RLg~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G--~~~~ip~vImtS~~ 169 (505)
T 1jv1_A 103 VAVLLLAGGQGT-----------RLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG--NKCIIPWYIMTSGR 169 (505)
T ss_dssp EEEEEECCCCCC-----------TTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS--SCCCCCEEEEECTT
T ss_pred eEEEEEcCCccc-----------cCCCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCC
Confidence 379999999999 2243 47877655 334467766666544 221 13 00112222 3333
Q ss_pred CHHHHHHHHHh
Q 031219 123 TAHELICKLEE 133 (163)
Q Consensus 123 ~~ee~~~~l~~ 133 (163)
+.+.+.+++++
T Consensus 170 t~e~t~~~f~~ 180 (505)
T 1jv1_A 170 TMESTKEFFTK 180 (505)
T ss_dssp THHHHHHHHHH
T ss_pred CHHHHHHHHHh
Confidence 47778888876
No 92
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=30.10 E-value=63 Score=25.66 Aligned_cols=43 Identities=28% Similarity=0.546 Sum_probs=28.8
Q ss_pred ccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHH-----HHHHHHHcC
Q 031219 59 LPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLS-----FIDKAVDEG 108 (163)
Q Consensus 59 lPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~-----~l~~~~~~g 108 (163)
|-.|. |++.+|+.+.- +.. ..|++++ +||++++. |++.+.+.|
T Consensus 69 L~~g~-~~~~~~~~~~~--~r~-~~Pivlm---~Y~N~i~~~G~e~F~~~~~~aG 116 (252)
T 3tha_A 69 LDQGV-DIHSVFELLAR--IKT-KKALVFM---VYYNLIFSYGLEKFVKKAKSLG 116 (252)
T ss_dssp HHTTC-CHHHHHHHHHH--CCC-SSEEEEE---CCHHHHHHHCHHHHHHHHHHTT
T ss_pred HHCCC-CHHHHHHHHHH--Hhc-CCCEEEE---eccCHHHHhhHHHHHHHHHHcC
Confidence 34454 78888887753 322 2799998 59998765 556666655
No 93
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=30.06 E-value=99 Score=22.78 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=24.7
Q ss_pred HHHh-cCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 49 MARQ-ADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 49 m~~~-sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
+-+. .|++|+.|-.....++..+.+.. .+.|+|+++.
T Consensus 55 ~~~~~vdgii~~~~~~~~~~~~~~~~~~-----~~ipvV~~~~ 92 (276)
T 3ksm_A 55 LSQAPPDALILAPNSAEDLTPSVAQYRA-----RNIPVLVVDS 92 (276)
T ss_dssp HHHSCCSEEEECCSSTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHhCCCCEEEEeCCCHHHHHHHHHHHHH-----CCCcEEEEec
Confidence 3345 79999998766566666665532 3668888763
No 94
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=29.71 E-value=1.3e+02 Score=23.16 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=27.7
Q ss_pred hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcc
Q 031219 52 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 94 (163)
Q Consensus 52 ~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw 94 (163)
...+.|+|+|| .|...+++.+.- ...--+-+.+++.+-||
T Consensus 44 ~~~~~l~LsgG-sTp~~ly~~L~~--~~i~w~~v~~f~~DEr~ 83 (232)
T 1vl1_A 44 KDKIFVVLAGG-RTPLPVYEKLAE--QKFPWNRIHFFLSDERY 83 (232)
T ss_dssp CSCEEEEECCS-TTHHHHHHHHTT--SCCCGGGEEEEESEEES
T ss_pred CCCeEEEEcCC-ccHHHHHHHHHH--cCCChhHEEEEeCeEee
Confidence 45789999998 788899988752 22223566666666666
No 95
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=29.51 E-value=64 Score=25.70 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHH-----hcCEEEEccCCCCCHHHHHHHHHHHHc-CCCCCcEEEEecCCcchHHHHHHHHHHHcCCC
Q 031219 40 SGMHQRKAEMAR-----QADAFIALPGGYGTLEELLEVITWAQL-GIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFI 110 (163)
Q Consensus 40 ~~m~~Rk~~m~~-----~sDafIalPGG~GTLdEl~e~~~~~ql-g~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi 110 (163)
.+-.+|-+-+.+ ..||++..-||+|+. ++..-+.+..+ ..++| ++++ |+++-.++-.+...+.+
T Consensus 51 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~-rlL~~lD~~~i~~~~PK--~~~G----ySDiTaL~~al~~~~~~ 120 (274)
T 3g23_A 51 GSDALRLSAFLECANDDAFEAVWFVRGGYGAN-RIAEDALARLGRAASAK--QYLG----YSDAGTLLAALYAHRIG 120 (274)
T ss_dssp SCHHHHHHHHHHHHTCTTCSEEEESCCSSCTH-HHHHHHHTTCCGGGGGC--EEEE----CGGGHHHHHHHHHTTCS
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeeccccHH-HHHHhhhhhhhhhhCCc--EEEE----echHHHHHHHHHHhcCc
Confidence 455778776655 357999999999995 55555554333 23444 4543 67776665555565544
No 96
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=28.83 E-value=62 Score=21.41 Aligned_cols=13 Identities=0% Similarity=-0.095 Sum_probs=6.3
Q ss_pred cCEEEEccCCCCC
Q 031219 53 ADAFIALPGGYGT 65 (163)
Q Consensus 53 sDafIalPGG~GT 65 (163)
.|+=+++-|++|-
T Consensus 55 ~gv~~vi~~~iG~ 67 (105)
T 2qtd_A 55 ENVNAIICKNISE 67 (105)
T ss_dssp TCCSEEEESCCCH
T ss_pred CCCCEEEECCCCH
Confidence 3443344466665
No 97
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=28.07 E-value=32 Score=30.23 Aligned_cols=65 Identities=14% Similarity=0.172 Sum_probs=36.6
Q ss_pred CEEEEccCCCCCHHHHHHHHHHHHcCC-CCCcEEEEe-cCCcchHHHHHHHHHHHcCCCCccccccEEE--eCCHHHHHH
Q 031219 54 DAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLN-VDGYYNSLLSFIDKAVDEGFIAPAARYIIVS--AQTAHELIC 129 (163)
Q Consensus 54 DafIalPGG~GTLdEl~e~~~~~qlg~-~~kPivlln-~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~--~~~~ee~~~ 129 (163)
-++|+|-||.|| .+|. .+||++=+. ..-|.+-+++.+..+-.. .......+.. ..+.+.+.+
T Consensus 76 ~avViLAGGlGT-----------RLg~~~PK~llpV~~gk~fLe~~ie~l~~~~~~---~g~~ip~viMtS~~t~e~t~~ 141 (505)
T 2oeg_A 76 TVVLKLNGGLGT-----------GMGLCDAKTLLEVKDGKTFLDFTALQVQYLRQH---CSEHLRFMLMDSFNTSASTKS 141 (505)
T ss_dssp EEEEEEECCCCG-----------GGTCCSCGGGSEEETTEEHHHHHHHHHHHHHHH---TCTTCEEEEEECHHHHHHHHH
T ss_pred ceEEEEcCCccc-----------ccCCCCCCcccccCCCCcHHHHHHHHHHHHHHh---cCCCcCEEEEeCCCCHHHHHH
Confidence 479999999999 2343 478877665 334556555555544221 0011122222 234566777
Q ss_pred HHH
Q 031219 130 KLE 132 (163)
Q Consensus 130 ~l~ 132 (163)
+++
T Consensus 142 ~f~ 144 (505)
T 2oeg_A 142 FLK 144 (505)
T ss_dssp HHH
T ss_pred HHh
Confidence 776
No 98
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=27.90 E-value=2.2e+02 Score=22.44 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=40.8
Q ss_pred HHHHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeC
Q 031219 45 RKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQ 122 (163)
Q Consensus 45 Rk~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~ 122 (163)
....++..||+||.-. .|+|. =++|+++. .+|+|..+..| +. .++.++ ..-.+++
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~--~~lEAma~------G~PvI~~~~~g----~~----e~i~~~-------~~g~l~~ 364 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGL--TVTEAMWK------GKPVIGRAVGG----IK----FQIVDG-------ETGFLVR 364 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCH--HHHHHHHT------TCCEEEESCHH----HH----HHCCBT-------TTEEEES
T ss_pred HHHHHHHhCCEEEECCCcCCCcc--HHHHHHHc------CCCEEEccCCC----Ch----hheecC-------CCeEEEC
Confidence 4556778899986532 25555 36777754 89999887532 22 232221 1222334
Q ss_pred CHHHHHHHHHhhc
Q 031219 123 TAHELICKLEEYV 135 (163)
Q Consensus 123 ~~ee~~~~l~~~~ 135 (163)
|++++.+.|.+..
T Consensus 365 d~~~la~~i~~ll 377 (416)
T 2x6q_A 365 DANEAVEVVLYLL 377 (416)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8998888887653
No 99
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=27.15 E-value=92 Score=23.77 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=26.8
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
++-+..|++|+.|-....+.+..+.+. ..+.|+|+++.
T Consensus 54 l~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 91 (313)
T 3m9w_A 54 MINRGVDVLVIIPYNGQVLSNVVKEAK-----QEGIKVLAYDR 91 (313)
T ss_dssp HHHTTCSEEEEECSSTTSCHHHHHHHH-----TTTCEEEEESS
T ss_pred HHHcCCCEEEEeCCChhhhHHHHHHHH-----HCCCeEEEECC
Confidence 344569999999988777677666553 23678888764
No 100
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=26.83 E-value=15 Score=31.83 Aligned_cols=14 Identities=14% Similarity=0.195 Sum_probs=12.1
Q ss_pred hcCEEEEccCCCCC
Q 031219 52 QADAFIALPGGYGT 65 (163)
Q Consensus 52 ~sDafIalPGG~GT 65 (163)
.=.|+||++||+||
T Consensus 398 ~~~~~vVC~~Gigt 411 (485)
T 3sqn_A 398 TMTAYFLFQGEPAW 411 (485)
T ss_dssp SEEEEEECCSCHHH
T ss_pred cceEEEECCCchhH
Confidence 34589999999999
No 101
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=26.71 E-value=39 Score=26.43 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=18.9
Q ss_pred EEEccCCCCCHHHHH---HHHHHH-HcCCCCCcEEEEe
Q 031219 56 FIALPGGYGTLEELL---EVITWA-QLGIHDKPVGLLN 89 (163)
Q Consensus 56 fIalPGG~GTLdEl~---e~~~~~-qlg~~~kPivlln 89 (163)
.|++|||.|++..+. .+..|. +...+.|||..+-
T Consensus 108 ~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC 145 (247)
T 3n7t_A 108 LMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVC 145 (247)
T ss_dssp EEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEET
T ss_pred EEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEC
Confidence 789999999863321 111221 1123577777653
No 102
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=26.40 E-value=1.2e+02 Score=22.88 Aligned_cols=37 Identities=11% Similarity=0.080 Sum_probs=25.4
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
+-...|++|+.|......++..+.+.. .+.|+|+++.
T Consensus 58 ~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 94 (305)
T 3g1w_A 58 IAKNPAGIAISAIDPVELTDTINKAVD-----AGIPIVLFDS 94 (305)
T ss_dssp HHHCCSEEEECCSSTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHhCCCEEEEcCCCHHHHHHHHHHHHH-----CCCcEEEECC
Confidence 445689999999876656666555432 3678888764
No 103
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=26.30 E-value=1.2e+02 Score=22.72 Aligned_cols=38 Identities=13% Similarity=-0.022 Sum_probs=25.7
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
++-...|++|+.|...-.+.+..+.+.. .+.|+|+++.
T Consensus 60 l~~~~vdgiI~~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 97 (293)
T 3l6u_A 60 FVHLKVDAIFITTLDDVYIGSAIEEAKK-----AGIPVFAIDR 97 (293)
T ss_dssp HHHTTCSEEEEECSCTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHHcCCCEEEEecCChHHHHHHHHHHHH-----cCCCEEEecC
Confidence 3445689999998776666566655532 3678888764
No 104
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=26.26 E-value=27 Score=27.05 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=52.4
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHH-----cCC-CCCcEEEEec--CCcchH--HHHHHHHHHHcCC--CCccccc
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQ-----LGI-HDKPVGLLNV--DGYYNS--LLSFIDKAVDEGF--IAPAARY 116 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~q-----lg~-~~kPivlln~--~Gfw~~--l~~~l~~~~~~gf--i~~~~~~ 116 (163)
+.+.+|++||.|=..+||.-+..-++=.- ... .++|++++-- ...|+. ....|++|.+.|+ +++....
T Consensus 93 l~~~aD~mvIaPaTanTlAKiA~GiaDnLlt~~~~A~d~~~pvvlaPaMN~~M~e~P~t~~nl~~L~~~G~~ivpP~~g~ 172 (209)
T 1mvl_A 93 LRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKR 172 (209)
T ss_dssp HHHHCSEEEEEEECHHHHHHHHHTCCSSHHHHHHHTCCTTSCEEEEECCCHHHHHSHHHHHHHHHHHHHTCEECCCBC--
T ss_pred hcccCCEEEEecCCHHHHHHHHccccCcHHHHHHHHhcCCCCEEEEECCChhHhhChhHHHHHHHHHHCCCEEeCCcccc
Confidence 34679999999999999988764332110 111 2789999631 246754 3334677777774 3433321
Q ss_pred cE------EEeCCHHHHHHHHHhh
Q 031219 117 II------VSAQTAHELICKLEEY 134 (163)
Q Consensus 117 ~i------~~~~~~ee~~~~l~~~ 134 (163)
.- --..+++++++.+...
T Consensus 173 lacg~~G~gr~~~~~~Iv~~v~~~ 196 (209)
T 1mvl_A 173 LASGDYGNGAMAEPSLIYSTVRLF 196 (209)
T ss_dssp -------CCBCCCHHHHHHHHHHH
T ss_pred ccCCCcCCCCCCCHHHHHHHHHHH
Confidence 11 1245799999888764
No 105
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=25.99 E-value=58 Score=24.10 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=19.3
Q ss_pred EEEccCCCCCHHHHH---HHHHHH--HcCCCCCcEEEEe
Q 031219 56 FIALPGGYGTLEELL---EVITWA--QLGIHDKPVGLLN 89 (163)
Q Consensus 56 fIalPGG~GTLdEl~---e~~~~~--qlg~~~kPivlln 89 (163)
.|++|||.+..+.+. .+..|. +.....||+...-
T Consensus 76 ~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC 114 (194)
T 4gdh_A 76 IAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMIC 114 (194)
T ss_dssp EEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEG
T ss_pred EEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeec
Confidence 578899976554432 223332 2334568887664
No 106
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.92 E-value=84 Score=25.06 Aligned_cols=46 Identities=26% Similarity=0.397 Sum_probs=29.7
Q ss_pred ccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHH-----HHHHHHHHcC
Q 031219 59 LPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLL-----SFIDKAVDEG 108 (163)
Q Consensus 59 lPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~-----~~l~~~~~~g 108 (163)
|-.|+ |++.+|+.+.-.+-.....|++++ +||+++. +|++.+.+.|
T Consensus 75 L~~G~-~~~~~~~~v~~~r~~~~~~Pivlm---~Y~n~v~~~g~~~f~~~~~~aG 125 (271)
T 3nav_A 75 LAAKT-TPDICFELIAQIRARNPETPIGLL---MYANLVYARGIDDFYQRCQKAG 125 (271)
T ss_dssp HHTTC-CHHHHHHHHHHHHHHCTTSCEEEE---ECHHHHHHTCHHHHHHHHHHHT
T ss_pred HHcCC-CHHHHHHHHHHHHhcCCCCCEEEE---ecCcHHHHHhHHHHHHHHHHCC
Confidence 34453 677778777543322246799998 5998754 4677777766
No 107
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=25.91 E-value=42 Score=27.14 Aligned_cols=29 Identities=14% Similarity=0.184 Sum_probs=16.2
Q ss_pred HHHHHhcCEEEEccCCCCCHHHHHHHHHH
Q 031219 47 AEMARQADAFIALPGGYGTLEELLEVITW 75 (163)
Q Consensus 47 ~~m~~~sDafIalPGG~GTLdEl~e~~~~ 75 (163)
+.+.+..+.-|+.-||++|.+.+..++.+
T Consensus 180 ~~I~e~~~vPVI~eGGI~TPsDAa~AmeL 208 (265)
T 1wv2_A 180 RIILEEAKVPVLVDAGVGTASDAAIAMEL 208 (265)
T ss_dssp HHHHHHCSSCBEEESCCCSHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEeCCCCCHHHHHHHHHc
Confidence 34444555555556666666666655544
No 108
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=25.88 E-value=61 Score=25.42 Aligned_cols=50 Identities=12% Similarity=0.157 Sum_probs=31.1
Q ss_pred cCEEEEccCCCCCHHHHHHHHHHHHcCC-CCCcEEEEec--CCcc-----hHHHHHHHHHHHc
Q 031219 53 ADAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLNV--DGYY-----NSLLSFIDKAVDE 107 (163)
Q Consensus 53 sDafIalPGG~GTLdEl~e~~~~~qlg~-~~kPivlln~--~Gfw-----~~l~~~l~~~~~~ 107 (163)
.|. |+.-||=||+-+.+..+. +. .++|++-+|. .||. +++.+.++.+.+.
T Consensus 36 ~D~-vv~lGGDGT~l~aa~~~~----~~~~~~PilGIn~G~lgfl~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI-VISIGGDGTFLSAFHQYE----ERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE-EEEEESHHHHHHHHHHTG----GGTTTCEEEEEESSSCCSSCCBCGGGHHHHHHHHHTT
T ss_pred CCE-EEEEcCcHHHHHHHHHHh----hcCCCCCEEEEeCCCCCcCCcCCHHHHHHHHHHHHcC
Confidence 454 455689999988876652 11 2679777764 4565 4455556665543
No 109
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=25.70 E-value=85 Score=24.94 Aligned_cols=44 Identities=34% Similarity=0.456 Sum_probs=28.2
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHH-----HHHHHHHHHcC
Q 031219 61 GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSL-----LSFIDKAVDEG 108 (163)
Q Consensus 61 GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l-----~~~l~~~~~~g 108 (163)
.|+ |++.+++.+.-.+-.....|++++ +||+++ .+|++.+.+.|
T Consensus 75 ~G~-~~~~~~~~v~~ir~~~~~~Pivlm---~Y~npv~~~g~e~f~~~~~~aG 123 (267)
T 3vnd_A 75 AGT-TSSDCFDIITKVRAQHPDMPIGLL---LYANLVFANGIDEFYTKAQAAG 123 (267)
T ss_dssp TTC-CHHHHHHHHHHHHHHCTTCCEEEE---ECHHHHHHHCHHHHHHHHHHHT
T ss_pred cCC-CHHHHHHHHHHHHhcCCCCCEEEE---ecCcHHHHhhHHHHHHHHHHcC
Confidence 453 566777766543321136799987 599985 55677777766
No 110
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=25.68 E-value=15 Score=30.07 Aligned_cols=66 Identities=23% Similarity=0.419 Sum_probs=44.3
Q ss_pred cCCHHHHHHHHHHh-----cCEEEEccCCCCCHHHHHHHHHHHHcCC-CCCcEEEEecCCcchHHHHHHHHHHHcCCCC
Q 031219 39 VSGMHQRKAEMARQ-----ADAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIA 111 (163)
Q Consensus 39 ~~~m~~Rk~~m~~~-----sDafIalPGG~GTLdEl~e~~~~~qlg~-~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~ 111 (163)
..+-.+|-+-+.+. .||++..-||+|+. ++..-+.+..+.. ++|+++ -|+++-.++-.+...|+.+
T Consensus 62 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~-rlLp~LD~~~i~~a~PK~~i------GySDiTaL~~al~~~G~~t 133 (311)
T 1zl0_A 62 AGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCG-QLLPGLDWGRLQAASPRPLI------GFSDISVLLSAFHRHGLPA 133 (311)
T ss_dssp SSCHHHHHHHHHHHHHSTTEEEEEESCCSSCGG-GGTTTCCHHHHHHSCCCCEE------ECGGGHHHHHHHHHTTCCE
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEccCCcCHH-HHhhccchhhhhccCCCEEE------EEchhHHHHHHHHHcCCcE
Confidence 45667787666643 47999999999995 4555555665555 677766 3677777666666557654
No 111
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=25.58 E-value=75 Score=23.46 Aligned_cols=57 Identities=23% Similarity=0.186 Sum_probs=31.1
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHH-HHHHHHcCCCCccccccEEEeCCHHHHHHHHHh
Q 031219 55 AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSF-IDKAVDEGFIAPAARYIIVSAQTAHELICKLEE 133 (163)
Q Consensus 55 afIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~-l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~ 133 (163)
..|+|-||.|| .++ +||+.-++. .+++.+ ++.+.+.+.+ .+.+.+++ .+++.+++++
T Consensus 6 ~aiIlA~G~g~-----------R~~--~K~l~~i~g----kpll~~~l~~~~~~~~~----~~ivvv~~-~~~i~~~~~~ 63 (228)
T 1ezi_A 6 IAVILARQNSK-----------GLP--LKNLRKMNG----ISLLGHTINAAISSKCF----DRIIVSTD-GGLIAEEAKN 63 (228)
T ss_dssp EEEEECCSSCS-----------SST--TTTTCEETT----EEHHHHHHHHHHHHCCC----SEEEEEES-CHHHHHHHHH
T ss_pred EEEEecCCCCC-----------CCC--CcccceeCC----cCHHHHHHHHHHhCCCC----CEEEEECC-CHHHHHHHHH
Confidence 46889999998 222 777777653 255554 3455444322 23344444 3555555544
No 112
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=25.49 E-value=62 Score=22.35 Aligned_cols=54 Identities=19% Similarity=0.220 Sum_probs=36.0
Q ss_pred HHHcCCCCCcEEEEecCCcchHHHHHHHH-HHHcCCCCccccccEEEe----CCHHHHHHHHHhh
Q 031219 75 WAQLGIHDKPVGLLNVDGYYNSLLSFIDK-AVDEGFIAPAARYIIVSA----QTAHELICKLEEY 134 (163)
Q Consensus 75 ~~qlg~~~kPivlln~~Gfw~~l~~~l~~-~~~~gfi~~~~~~~i~~~----~~~ee~~~~l~~~ 134 (163)
++.++-+-+|++.++.+|.-+.+++.++. +-...+| .+.+. +|.+++.+.|++.
T Consensus 10 LR~~ah~Lkpvv~IGK~GlTe~vi~ei~~aL~~hELI------KVkvl~~~~~d~~e~a~~la~~ 68 (104)
T 1rq8_A 10 LRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELI------KVHVLQNNFDDKKELAETLSEA 68 (104)
T ss_dssp HHHHTTSSCCSCEECSSSCCHHHHHHHHHHHHHSSEE------EEEECCCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCcE------EEEEeCCCHHHHHHHHHHHHHH
Confidence 34445567999999999999999999976 4443333 23343 3455667777664
No 113
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=25.32 E-value=63 Score=25.75 Aligned_cols=33 Identities=36% Similarity=0.557 Sum_probs=19.3
Q ss_pred EEEEccCCCCCH------HHHHHHHHHHHcCCCCCcEEEEe
Q 031219 55 AFIALPGGYGTL------EELLEVITWAQLGIHDKPVGLLN 89 (163)
Q Consensus 55 afIalPGG~GTL------dEl~e~~~~~qlg~~~kPivlln 89 (163)
..|++|||.|+. .++...+... ....|||+-+-
T Consensus 147 D~livPGG~g~~~~l~~~~~l~~~l~~~--~~~gk~VaaIC 185 (291)
T 1n57_A 147 AAIFVPGGHGALIGLPESQDVAAALQWA--IKNDRFVISLC 185 (291)
T ss_dssp EEEEECCSGGGGSSGGGCHHHHHHHHHH--HHTTCEEEEET
T ss_pred CEEEecCCcchhhhhhhCHHHHHHHHHH--HHcCCEEEEEC
Confidence 378999999986 2344333321 12466666553
No 114
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=25.10 E-value=1e+02 Score=22.94 Aligned_cols=94 Identities=11% Similarity=0.137 Sum_probs=57.9
Q ss_pred eEEecCCHHHHHHHHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHH-HHHHcCCCCcc
Q 031219 35 EVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFID-KAVDEGFIAPA 113 (163)
Q Consensus 35 ~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~-~~~~~gfi~~~ 113 (163)
+++++.+-.+....+++..-+++++.||...-+++...+.- ...|++....+ .+.- ...+. .+.-+..|.+.
T Consensus 122 ~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~-----~~~~~i~t~~d-~~~~-~~~~~~~~~v~~im~~~ 194 (245)
T 3l2b_A 122 DIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK-----NNITVITTPHD-SFTA-SRLIVQSLPVDYVMTKD 194 (245)
T ss_dssp CEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH-----HTCEEEECSSC-HHHH-HHHGGGGSBHHHHSBCT
T ss_pred CEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH-----cCCeEEEeCCC-hHHH-HHHHhcCCceeeEecCC
Confidence 46667777788888888888899999999999999888763 24566654322 2221 11111 11011133333
Q ss_pred ccccEEEeCCHHHHHHHHHhhc
Q 031219 114 ARYIIVSAQTAHELICKLEEYV 135 (163)
Q Consensus 114 ~~~~i~~~~~~ee~~~~l~~~~ 135 (163)
....+.--++.+++++.+.+..
T Consensus 195 ~~~~~~~~~~~~~~~~~m~~~~ 216 (245)
T 3l2b_A 195 NLVAVSTDDLVEDVKVTMSETR 216 (245)
T ss_dssp TCCCEETTSBHHHHHHHHHHHC
T ss_pred ccEEECCCCcHHHHHHHHHhcC
Confidence 3344555567899999998753
No 115
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=25.01 E-value=88 Score=23.43 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=25.1
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
++-...|++|+.|...-..++..+.+.. .+.|+|+++.
T Consensus 57 l~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 94 (291)
T 3l49_A 57 LIAQKPDAIIEQLGNLDVLNPWLQKIND-----AGIPLFTVDT 94 (291)
T ss_dssp HHHHCCSEEEEESSCHHHHHHHHHHHHH-----TTCCEEEESC
T ss_pred HHHcCCCEEEEeCCChhhhHHHHHHHHH-----CCCcEEEecC
Confidence 4446689999998765455555554432 3678888764
No 116
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=24.64 E-value=52 Score=26.23 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=19.6
Q ss_pred HHhcCEEEEccCCCCCHHHHHHHHHHHH-cCCCCCcEEEE
Q 031219 50 ARQADAFIALPGGYGTLEELLEVITWAQ-LGIHDKPVGLL 88 (163)
Q Consensus 50 ~~~sDafIalPGG~GTLdEl~e~~~~~q-lg~~~kPivll 88 (163)
+...|++ +||||.|+-. +.....+.+ .-..++|+.-.
T Consensus 88 l~~~dgi-il~GG~~~~~-~~~~~~~i~~~~~~~~PilGI 125 (289)
T 2v4u_A 88 LCKADGI-LVPGGFGIRG-TLGKLQAISWARTKKIPFLGV 125 (289)
T ss_dssp HHHCSEE-EECSCCSSTT-HHHHHHHHHHHHHTTCCEEEE
T ss_pred HhhCCEE-EecCCCCchh-HHHHHHHHHHHHHcCCcEEEE
Confidence 5567876 6788999732 222222211 11246887643
No 117
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=24.42 E-value=1.3e+02 Score=22.68 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=27.0
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
++-+..|++|+.|-....+++..+.+.. .+.|+|+++.
T Consensus 57 l~~~~vdgiii~~~~~~~~~~~~~~~~~-----~giPvV~~~~ 94 (297)
T 3rot_A 57 ALATYPSGIATTIPSDTAFSKSLQRANK-----LNIPVIAVDT 94 (297)
T ss_dssp HHHTCCSEEEECCCCSSTTHHHHHHHHH-----HTCCEEEESC
T ss_pred HHHcCCCEEEEeCCCHHHHHHHHHHHHH-----CCCCEEEEcC
Confidence 3445689999999887777777665532 2678888764
No 118
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=24.41 E-value=35 Score=26.83 Aligned_cols=44 Identities=25% Similarity=0.145 Sum_probs=21.5
Q ss_pred HHHHHHhcCEEEEccCCCCCHHHHHHHH-HH-HHcCCCCCcEEEEecCC
Q 031219 46 KAEMARQADAFIALPGGYGTLEELLEVI-TW-AQLGIHDKPVGLLNVDG 92 (163)
Q Consensus 46 k~~m~~~sDafIalPGG~GTLdEl~e~~-~~-~qlg~~~kPivlln~~G 92 (163)
-.-+++.+|++++=|| +|+- |..+.+ .. .....+++|+|+ +..+
T Consensus 50 ~~~~~~~~dalvi~~G-~~~~-~~~~~~~~~~~~a~~~~~pvVl-Dpv~ 95 (265)
T 1v8a_A 50 LEEMIRLADAVVINIG-TLDS-GWRRSMVKATEIANELGKPIVL-DPVG 95 (265)
T ss_dssp HHHHHHHCSEEEEECT-TCCH-HHHHHHHHHHHHHHHHTCCEEE-ECTT
T ss_pred HHHHHHHCCEEEEEEC-CCCH-HHHHHHHHHHHHHHHcCCcEEE-cCcc
Confidence 3345678999988333 3332 222221 11 112234688764 5544
No 119
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=24.21 E-value=1.3e+02 Score=24.53 Aligned_cols=73 Identities=21% Similarity=0.145 Sum_probs=41.5
Q ss_pred HHHHHhcCEEEEcc--CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcC----CCCccccccEEE
Q 031219 47 AEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEG----FIAPAARYIIVS 120 (163)
Q Consensus 47 ~~m~~~sDafIalP--GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~g----fi~~~~~~~i~~ 120 (163)
..++..||+||.-. -|+|. =++|+++. .+|+|..+..| +. .++.+| +........++-
T Consensus 360 ~~~~~~adv~v~pS~~E~~~~--~~lEAma~------G~PvI~s~~gg----~~----e~v~~~~~~~~~~~~~~G~l~~ 423 (485)
T 1rzu_A 360 HLMQAGCDAIIIPSRFEPCGL--TQLYALRY------GCIPVVARTGG----LA----DTVIDANHAALASKAATGVQFS 423 (485)
T ss_dssp HHHHHHCSEEEECCSCCSSCS--HHHHHHHH------TCEEEEESSHH----HH----HHCCBCCHHHHHTTCCCBEEES
T ss_pred HHHHhcCCEEEECcccCCCCH--HHHHHHHC------CCCEEEeCCCC----hh----heecccccccccccCCcceEeC
Confidence 56788899877532 46665 36777765 89999987632 22 233221 000001223333
Q ss_pred eCCHHHHHHHHHhhc
Q 031219 121 AQTAHELICKLEEYV 135 (163)
Q Consensus 121 ~~~~ee~~~~l~~~~ 135 (163)
..|++++.+.|.+..
T Consensus 424 ~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 424 PVTLDGLKQAIRRTV 438 (485)
T ss_dssp SCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 458888887776653
No 120
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=23.91 E-value=36 Score=25.95 Aligned_cols=10 Identities=40% Similarity=1.152 Sum_probs=8.8
Q ss_pred EEEccCCCCC
Q 031219 56 FIALPGGYGT 65 (163)
Q Consensus 56 fIalPGG~GT 65 (163)
.|++|||.|+
T Consensus 93 ~livpGG~~~ 102 (232)
T 1vhq_A 93 ALIVPGGFGA 102 (232)
T ss_dssp EEEECCSTHH
T ss_pred EEEECCCcch
Confidence 6889999987
No 121
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=23.85 E-value=3.3e+02 Score=23.48 Aligned_cols=86 Identities=15% Similarity=0.110 Sum_probs=47.6
Q ss_pred HHHHHHHHH--hcCEEEE--c--cCCCCCH-HHHHHHHHHHHcCC-CCCcE-EEEecCCc---chHHHHHHHHHHHcCCC
Q 031219 43 HQRKAEMAR--QADAFIA--L--PGGYGTL-EELLEVITWAQLGI-HDKPV-GLLNVDGY---YNSLLSFIDKAVDEGFI 110 (163)
Q Consensus 43 ~~Rk~~m~~--~sDafIa--l--PGG~GTL-dEl~e~~~~~qlg~-~~kPi-vlln~~Gf---w~~l~~~l~~~~~~gfi 110 (163)
.+.-+.+++ ..|++++ + |++.... +++.+++.-.+-.. .+||+ ++....|. -+...+..+.+.+
T Consensus 317 ~~al~~~l~D~~vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~~~~~~~~~~~L~~---- 392 (480)
T 3dmy_A 317 NQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLED---- 392 (480)
T ss_dssp HHHHHHGGGCTTEEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTSTTCHHHHHHHHHH----
T ss_pred HHHHHHHhcCCCCCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccchhhHHHHHHHHHh----
Confidence 344444443 3456555 4 6666554 78888775433221 27995 33222222 1122222334443
Q ss_pred CccccccEEEeCCHHHHHHHHHhhcCC
Q 031219 111 APAARYIIVSAQTAHELICKLEEYVPK 137 (163)
Q Consensus 111 ~~~~~~~i~~~~~~ee~~~~l~~~~~~ 137 (163)
..+-+.+++|++++.+.....+
T Consensus 393 -----aGIp~f~spe~Av~a~~~l~~~ 414 (480)
T 3dmy_A 393 -----AGIAVVSSLPEATLLAAALIHP 414 (480)
T ss_dssp -----TTCEECSSHHHHHHHHHHHTSC
T ss_pred -----CCCcccCCHHHHHHHHHHHHhc
Confidence 3488999999999999887644
No 122
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=23.82 E-value=1.2e+02 Score=22.84 Aligned_cols=36 Identities=14% Similarity=0.004 Sum_probs=24.8
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEe
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 89 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln 89 (163)
+-...|++|+.|-......+..+.+. ..+.|+|+++
T Consensus 54 ~~~~vdgiii~~~~~~~~~~~~~~~~-----~~~iPvV~~~ 89 (306)
T 8abp_A 54 AASGAKGFVICTPDPKLGSAIVAKAR-----GYDMKVIAVD 89 (306)
T ss_dssp HHTTCCEEEEECSCGGGHHHHHHHHH-----HTTCEEEEES
T ss_pred HHcCCCEEEEeCCCchhhHHHHHHHH-----HCCCcEEEeC
Confidence 34568999999977666555554432 2467999987
No 123
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=23.82 E-value=2.1e+02 Score=21.92 Aligned_cols=18 Identities=17% Similarity=0.348 Sum_probs=10.8
Q ss_pred HHHHHHhcCEEEEccCCCC
Q 031219 46 KAEMARQADAFIALPGGYG 64 (163)
Q Consensus 46 k~~m~~~sDafIalPGG~G 64 (163)
...+++..|++|+ |||.+
T Consensus 55 ~~~~l~~~DGlil-~GG~~ 72 (254)
T 3fij_A 55 AVQAISLVDGLLL-TGGQD 72 (254)
T ss_dssp HHHHHHTCSEEEE-CCCSC
T ss_pred HHHHHhhCCEEEE-CCCCC
Confidence 3445677888754 55533
No 124
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=23.71 E-value=2.8e+02 Score=22.42 Aligned_cols=83 Identities=16% Similarity=0.064 Sum_probs=41.8
Q ss_pred HHHHhCCCeEEEEeCCCCC--CCccc------CCCcceEEecCCH-HHHHHHHHHhcCEEEEccCCCCC---HHHHHHHH
Q 031219 6 QAVYDGGRHVLGVIPKTLM--PREIT------GDTVGEVKAVSGM-HQRKAEMARQADAFIALPGGYGT---LEELLEVI 73 (163)
Q Consensus 6 ~ga~~~GG~viGIiP~~~~--~~e~~------~~~~~~li~~~~m-~~Rk~~m~~~sDafIalPGG~GT---LdEl~e~~ 73 (163)
-+++.-||+++.+-|...- ..|.- -+.+.+.++..+. +..-..+.+.|++=|+=.|. |. .+-+.+++
T Consensus 56 ~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~-~~~HPtQaLaDl~ 134 (307)
T 3tpf_A 56 LAITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHETLLEFARYSKAPVINALS-ELYHPTQVLGDLF 134 (307)
T ss_dssp HHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHHSSEEEEECSCHHHHHHHHHHCSSCEEEEEC-SSCCHHHHHHHHH
T ss_pred HHHHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChHHHHHHHHhCCCCEEeCCC-CCcCcHHHHHHHH
Confidence 4678899999998665321 11110 0111244444333 45555566666654333332 32 45566666
Q ss_pred HHHHc-C-CC-CCcEEEEe
Q 031219 74 TWAQL-G-IH-DKPVGLLN 89 (163)
Q Consensus 74 ~~~ql-g-~~-~kPivlln 89 (163)
|..+. | .. ++.|.+++
T Consensus 135 Ti~e~~g~l~~gl~va~vG 153 (307)
T 3tpf_A 135 TIKEWNKMQNGIAKVAFIG 153 (307)
T ss_dssp HHHHTTCCGGGCCEEEEES
T ss_pred HHHHHhCCCCCCCEEEEEc
Confidence 65544 2 23 45566654
No 125
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=23.69 E-value=1.4e+02 Score=19.39 Aligned_cols=57 Identities=16% Similarity=0.242 Sum_probs=33.7
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHh
Q 031219 61 GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEE 133 (163)
Q Consensus 61 GG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~ 133 (163)
-|+|.|.++...+. ..+.++.+.+.. ..+...|+.. |+ .+.+.+.+|.+++++.+.+
T Consensus 58 sgl~~L~~~~~~~~-----~~g~~l~l~~~~---~~v~~~l~~~---gl-----~~~~~i~~~~~~Al~~~~~ 114 (117)
T 4hyl_A 58 AGLRVLLSLYRHTS-----NQQGALVLVGVS---EEIRDTMEIT---GF-----WNFFTACASMDEALRILGS 114 (117)
T ss_dssp HHHHHHHHHHHHHH-----HTTCEEEEECCC---HHHHHHHHHH---TC-----GGGCEEESCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHH-----HcCCEEEEEeCC---HHHHHHHHHh---Cc-----cceeeecCCHHHHHHHhcc
Confidence 35566555554442 346788888765 3333333332 22 3456788999998887643
No 126
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=23.59 E-value=1.8e+02 Score=20.56 Aligned_cols=38 Identities=18% Similarity=0.195 Sum_probs=26.5
Q ss_pred HHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCC
Q 031219 4 VSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYG 64 (163)
Q Consensus 4 va~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~G 64 (163)
+++.|++.|.++|+|+.... + -+.+.||..+.+|.+-.
T Consensus 98 ~~~~ak~~g~~vi~IT~~~~-------s----------------~l~~~ad~~l~~~~~~~ 135 (186)
T 1m3s_A 98 TAAKAKSLHGIVAALTINPE-------S----------------SIGKQADLIIRMPGSPK 135 (186)
T ss_dssp HHHHHHHTTCEEEEEESCTT-------S----------------HHHHHCSEEEECSCCSC
T ss_pred HHHHHHHCCCEEEEEECCCC-------C----------------chHHhCCEEEEeCCccc
Confidence 56778889999999966421 1 35667888888876543
No 127
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=23.08 E-value=1.1e+02 Score=22.88 Aligned_cols=55 Identities=9% Similarity=-0.040 Sum_probs=33.2
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecC--C----------cchHHHHHHHHHHHcC
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD--G----------YYNSLLSFIDKAVDEG 108 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~--G----------fw~~l~~~l~~~~~~g 108 (163)
.-...|++|++|-......+..+.+.. .+.|+|+++.. + .+..-....+++.+.|
T Consensus 66 ~~~~vdgiii~~~~~~~~~~~~~~~~~-----~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g 132 (304)
T 3gbv_A 66 IEEQPDGVMFAPTVPQYTKGFTDALNE-----LGIPYIYIDSQIKDAPPLAFFGQNSHQSGYFAARMLMLLA 132 (304)
T ss_dssp HTTCCSEEEECCSSGGGTHHHHHHHHH-----HTCCEEEESSCCTTSCCSEEEECCHHHHHHHHHHHHHHHS
T ss_pred HhcCCCEEEECCCChHHHHHHHHHHHH-----CCCeEEEEeCCCCCCCceEEEecChHHHHHHHHHHHHHHh
Confidence 345689999998766555666555533 26788877642 1 2233344456777765
No 128
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=22.87 E-value=1.3e+02 Score=22.54 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=23.7
Q ss_pred HHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 50 ARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 50 ~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
-+..|++|+.|......++..+.+. ..+.|+|+++.
T Consensus 57 ~~~vdgiii~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 92 (309)
T 2fvy_A 57 AKGVKALAINLVDPAAAGTVIEKAR-----GQNVPVVFFNK 92 (309)
T ss_dssp HTTCSEEEECCSSGGGHHHHHHHHH-----TTTCCEEEESS
T ss_pred HcCCCEEEEeCCCcchhHHHHHHHH-----HCCCcEEEecC
Confidence 4568999998876554555554432 24678888875
No 129
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=22.58 E-value=1.2e+02 Score=23.24 Aligned_cols=72 Identities=15% Similarity=0.004 Sum_probs=43.8
Q ss_pred HHHHHHHHhcCEEEEc------------cCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCC
Q 031219 44 QRKAEMARQADAFIAL------------PGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIA 111 (163)
Q Consensus 44 ~Rk~~m~~~sDafIal------------PGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~ 111 (163)
+....++..||++|.- ..|+|. =++|+++. .+|+|..+..| .. .++.+.
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~--~~~EAma~------G~PvI~s~~~~-~~-------e~~~~~--- 283 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGAT--VVSEAAVS------GTPVVGTGNGC-LA-------EIVPSV--- 283 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCH--HHHHHHHT------TCCEEECCTTT-HH-------HHGGGG---
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccH--HHHHHHhc------CCCEEEcCCCC-hH-------HHhccc---
Confidence 4447788999998864 346665 47777754 89999988643 22 222220
Q ss_pred ccccccEEEeCCHHHHHHHHHhhc
Q 031219 112 PAARYIIVSAQTAHELICKLEEYV 135 (163)
Q Consensus 112 ~~~~~~i~~~~~~ee~~~~l~~~~ 135 (163)
......+.-. |++++.+.|.+..
T Consensus 284 ~~~~g~~~~~-d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 284 GEVVGYGTDF-APDEARRTLAGLP 306 (342)
T ss_dssp EEECCSSSCC-CHHHHHHHHHTSC
T ss_pred CCCceEEcCC-CHHHHHHHHHHHH
Confidence 0111222222 8888888887754
No 130
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=22.49 E-value=1.4e+02 Score=22.57 Aligned_cols=37 Identities=27% Similarity=0.215 Sum_probs=23.8
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
+-+..|++|+.|...-.+++..+.+.. .+.|+|+++.
T Consensus 55 ~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 91 (306)
T 2vk2_A 55 VAQGVDAIFIAPVVATGWEPVLKEAKD-----AEIPVFLLDR 91 (306)
T ss_dssp HHHTCSEEEECCSSSSSCHHHHHHHHH-----TTCCEEEESS
T ss_pred HHcCCCEEEEeCCChhhHHHHHHHHHH-----CCCCEEEecC
Confidence 346789999998665444555544432 3578888764
No 131
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=22.44 E-value=78 Score=27.28 Aligned_cols=73 Identities=18% Similarity=0.162 Sum_probs=43.2
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHH-HHHHHHHHHHcCCC
Q 031219 3 LVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLE-ELLEVITWAQLGIH 81 (163)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLd-El~e~~~~~qlg~~ 81 (163)
.+|+.++..|.+|++.-+......+.....+ .+.++. -.+..||.||..+|-.+.++ |.+..+
T Consensus 234 ~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~----~v~~Le----eal~~ADIVi~atgt~~lI~~e~l~~M-------- 297 (435)
T 3gvp_A 234 GCCAALKAMGSIVYVTEIDPICALQACMDGF----RLVKLN----EVIRQVDIVITCTGNKNVVTREHLDRM-------- 297 (435)
T ss_dssp HHHHHHHHTTCEEEEECSCHHHHHHHHHTTC----EECCHH----HHTTTCSEEEECSSCSCSBCHHHHHHS--------
T ss_pred HHHHHHHHCCCEEEEEeCChhhhHHHHHcCC----EeccHH----HHHhcCCEEEECCCCcccCCHHHHHhc--------
Confidence 4666777788888886322110000000111 123443 36778999999998888887 666655
Q ss_pred CCcEEEEecC
Q 031219 82 DKPVGLLNVD 91 (163)
Q Consensus 82 ~kPivlln~~ 91 (163)
++-.+++|+.
T Consensus 298 K~gailINvg 307 (435)
T 3gvp_A 298 KNSCIVCNMG 307 (435)
T ss_dssp CTTEEEEECS
T ss_pred CCCcEEEEec
Confidence 4556777774
No 132
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=22.41 E-value=1.2e+02 Score=26.46 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=42.2
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhcCEEEEccCCCCCHH-HHHHHHHHHHcCCC
Q 031219 3 LVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLE-ELLEVITWAQLGIH 81 (163)
Q Consensus 3 ava~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~sDafIalPGG~GTLd-El~e~~~~~qlg~~ 81 (163)
.+|+.++..|.+|+..-+......+.....+ .+.++. -+++.||.||..+|-.+.++ |.+..+
T Consensus 261 ~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~----~vv~Le----ElL~~ADIVv~atgt~~lI~~e~l~~M-------- 324 (464)
T 3n58_A 261 GSAQSLAGAGARVKVTEVDPICALQAAMDGF----EVVTLD----DAASTADIVVTTTGNKDVITIDHMRKM-------- 324 (464)
T ss_dssp HHHHHHHHTTCEEEEECSSHHHHHHHHHTTC----EECCHH----HHGGGCSEEEECCSSSSSBCHHHHHHS--------
T ss_pred HHHHHHHHCCCEEEEEeCCcchhhHHHhcCc----eeccHH----HHHhhCCEEEECCCCccccCHHHHhcC--------
Confidence 4667777788888877221110000000111 123443 36789999999998777763 555444
Q ss_pred CCcEEEEecCC
Q 031219 82 DKPVGLLNVDG 92 (163)
Q Consensus 82 ~kPivlln~~G 92 (163)
++-.+++|+..
T Consensus 325 K~GAILINvGR 335 (464)
T 3n58_A 325 KDMCIVGNIGH 335 (464)
T ss_dssp CTTEEEEECSS
T ss_pred CCCeEEEEcCC
Confidence 55667778753
No 133
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=22.15 E-value=1.5e+02 Score=22.64 Aligned_cols=38 Identities=11% Similarity=0.018 Sum_probs=25.8
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
++-+..|++|+.|-......+..+.+.. .+.|+|+++.
T Consensus 55 ~~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~giPvV~~~~ 92 (330)
T 3uug_A 55 MVTKGVKVLVIASIDGTTLSDVLKQAGE-----QGIKVIAYDR 92 (330)
T ss_dssp HHHHTCSEEEECCSSGGGGHHHHHHHHH-----TTCEEEEESS
T ss_pred HHHcCCCEEEEEcCCchhHHHHHHHHHH-----CCCCEEEECC
Confidence 3456789999998776555666655432 3678888764
No 134
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=22.14 E-value=85 Score=24.56 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=26.9
Q ss_pred HHHHHhcCEEEEccCCCC-CHHHHHHHHHHHHcCCCCCcEEEEe
Q 031219 47 AEMARQADAFIALPGGYG-TLEELLEVITWAQLGIHDKPVGLLN 89 (163)
Q Consensus 47 ~~m~~~sDafIalPGG~G-TLdEl~e~~~~~qlg~~~kPivlln 89 (163)
+.|.+..--+|.+.|+.| |++.+++.+...+ ..+.|++++.
T Consensus 27 ~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir--~~~~Pivl~~ 68 (234)
T 2f6u_A 27 KAVADSGTDAVMISGTQNVTYEKARTLIEKVS--QYGLPIVVEP 68 (234)
T ss_dssp HHHHTTTCSEEEECCCTTCCHHHHHHHHHHHT--TSCCCEEECC
T ss_pred HHHHHcCCCEEEECCCCCCCHHHHHHHHHHhc--CCCCCEEEec
Confidence 455555433566777777 5666888776543 3578999963
No 135
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=21.87 E-value=3.3e+02 Score=22.25 Aligned_cols=84 Identities=14% Similarity=0.098 Sum_probs=45.6
Q ss_pred HHHHhCCCeEEEEeCCCC--CCCccc------CCCcceEEecCCH-HHHHHHHHHhcCEEEEccCCCC--CHHHHHHHHH
Q 031219 6 QAVYDGGRHVLGVIPKTL--MPREIT------GDTVGEVKAVSGM-HQRKAEMARQADAFIALPGGYG--TLEELLEVIT 74 (163)
Q Consensus 6 ~ga~~~GG~viGIiP~~~--~~~e~~------~~~~~~li~~~~m-~~Rk~~m~~~sDafIalPGG~G--TLdEl~e~~~ 74 (163)
-|+..-||+++.+-|... -..|.- -+.+.+.++..+. +..-..+.+.|++=|+=.|.-+ -.+-+.+++|
T Consensus 68 ~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~T 147 (323)
T 3gd5_A 68 VAMYQLGGQVIDLSPSNTQVGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIPVINALTDHEHPCQVVADLLT 147 (323)
T ss_dssp HHHHHTTCEEEEC----------CCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHH
T ss_pred HHHHHcCCeEEEeCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHH
Confidence 467889999999866432 111110 1223455555444 5666677777877555554411 1456677777
Q ss_pred HHHc-C-CCCCcEEEEe
Q 031219 75 WAQL-G-IHDKPVGLLN 89 (163)
Q Consensus 75 ~~ql-g-~~~kPivlln 89 (163)
..+. | ..++.|++++
T Consensus 148 i~e~~g~l~glkva~vG 164 (323)
T 3gd5_A 148 IRENFGRLAGLKLAYVG 164 (323)
T ss_dssp HHHHHSCCTTCEEEEES
T ss_pred HHHHhCCCCCCEEEEEC
Confidence 6654 4 3466777765
No 136
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.65 E-value=1.9e+02 Score=19.40 Aligned_cols=62 Identities=19% Similarity=0.380 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccccEEEeCCHHHHHHHHHhhc
Q 031219 67 EELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEEYV 135 (163)
Q Consensus 67 dEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~ee~~~~l~~~~ 135 (163)
..+-+++.. ..-..||++++-...--++.-+|-.....+|. .--+.-..||||+.+..+++.
T Consensus 38 qdirdiiks--mkdngkplvvfvngasqndvnefqneakkegv-----sydvlkstdpeeltqrvrefl 99 (112)
T 2lnd_A 38 QDIRDIIKS--MKDNGKPLVVFVNGASQNDVNEFQNEAKKEGV-----SYDVLKSTDPEELTQRVREFL 99 (112)
T ss_dssp HHHHHHHHH--HTTCCSCEEEEECSCCHHHHHHHHHHHHHHTC-----EEEEEECCCHHHHHHHHHHHH
T ss_pred hhHHHHHHH--HHhcCCeEEEEecCcccccHHHHHHHHHhcCc-----chhhhccCCHHHHHHHHHHHH
Confidence 344444432 23467998876332233444444445666663 122455789999998888764
No 137
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=21.56 E-value=35 Score=27.50 Aligned_cols=34 Identities=26% Similarity=0.422 Sum_probs=23.9
Q ss_pred cCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 53 ADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 53 sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
.|. |+.-||=||+.|+...+.- ...+.|+.+++.
T Consensus 81 ~d~-vvv~GGDGTv~~v~~~l~~---~~~~~pl~iIP~ 114 (337)
T 2qv7_A 81 YDV-LIAAGGDGTLNEVVNGIAE---KPNRPKLGVIPM 114 (337)
T ss_dssp CSE-EEEEECHHHHHHHHHHHTT---CSSCCEEEEEEC
T ss_pred CCE-EEEEcCchHHHHHHHHHHh---CCCCCcEEEecC
Confidence 354 5556999999999988721 124679888864
No 138
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=21.50 E-value=57 Score=23.18 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=27.6
Q ss_pred HHHHHhcCEEEEc--cC---CCCCHHHHHHHHHHHHcCCCCCcEEEEe
Q 031219 47 AEMARQADAFIAL--PG---GYGTLEELLEVITWAQLGIHDKPVGLLN 89 (163)
Q Consensus 47 ~~m~~~sDafIal--PG---G~GTLdEl~e~~~~~qlg~~~kPivlln 89 (163)
..|+..+|+++|+ || +-|--.|+--+-. .++||.+++
T Consensus 77 ~~lL~~CdevwV~~L~Gw~~S~Gm~~Ei~~A~~------~g~pV~~~~ 118 (125)
T 1t1j_A 77 AFYMDHLEELIVLDLPGWRDSAGIRREMEFFEA------GGQRVSLWS 118 (125)
T ss_dssp HHHHHHCSEEEECCCTTGGGCHHHHHHHHHHHH------TTCEEEEHH
T ss_pred HHHHHhCCeeEEEecCCCCCChhHHHHHHHHHH------CCCcEEEEc
Confidence 4578999997655 68 7888888876654 378998654
No 139
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=21.46 E-value=90 Score=25.75 Aligned_cols=49 Identities=22% Similarity=0.323 Sum_probs=34.8
Q ss_pred hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec-----CCcchHHHHHHHH
Q 031219 52 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-----DGYYNSLLSFIDK 103 (163)
Q Consensus 52 ~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~-----~Gfw~~l~~~l~~ 103 (163)
..|+|||+= |.=||+|-...+++.- ..+|||||.+- .-..|...+++..
T Consensus 90 ~~dGvVItH-GTDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~A 143 (337)
T 4pga_A 90 DVDGIVITH-GTDTLEETAYFLNLVQ--KTDKPIVVVGSMRPGTAMSADGMLNLYNA 143 (337)
T ss_dssp TCSEEEEEC-CSTTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCeEEEEC-CCccHHHHHHHHHHHc--CCCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 468888875 5799999999998763 45899999853 2234555555543
No 140
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=21.13 E-value=3.1e+02 Score=21.68 Aligned_cols=88 Identities=17% Similarity=0.068 Sum_probs=45.5
Q ss_pred CHHHHHHHHHH--hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCC-----c-
Q 031219 41 GMHQRKAEMAR--QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIA-----P- 112 (163)
Q Consensus 41 ~m~~Rk~~m~~--~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~-----~- 112 (163)
++.+=.+.+.+ ..++++..--++|+.+|.+..+.- -...+|||+++.. |-..+--.. +-..|-+- .
T Consensus 193 ~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~--~~~~~KPVv~~k~-G~s~~~~~~---~sHtgal~~~~~g~~ 266 (297)
T 2yv2_A 193 SFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIK--KGEFTKPVIAYIA-GRTAPPEKR---MGHAGAIIMMGTGTY 266 (297)
T ss_dssp CHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHH--TTSCCSCEEEEES-CCC---------------------CSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHH--hccCCCCEEEEEe-CCCCccccc---cCCccccccCCCCCH
Confidence 34444444443 344677777777777765544322 1235899999864 444421111 11112221 0
Q ss_pred ------cccccEEEeCCHHHHHHHHHhh
Q 031219 113 ------AARYIIVSAQTAHELICKLEEY 134 (163)
Q Consensus 113 ------~~~~~i~~~~~~ee~~~~l~~~ 134 (163)
-...-+..+++++|+.+.++..
T Consensus 267 ~~~~aa~~~aGv~~v~~~~el~~~~~~~ 294 (297)
T 2yv2_A 267 EGKVKALREAGVEVAETPFEVPELVRKA 294 (297)
T ss_dssp HHHHHHHHTTTCEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCeEeCCHHHHHHHHHHH
Confidence 0234578899999999988765
No 141
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=21.12 E-value=1.6e+02 Score=22.00 Aligned_cols=37 Identities=19% Similarity=0.044 Sum_probs=23.2
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
.-+..|++|+.|.....+.+..+.+. ..+.|+|+++.
T Consensus 55 ~~~~vdgiI~~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 91 (290)
T 2fn9_A 55 IAAGYDAIIFNPTDADGSIANVKRAK-----EAGIPVFCVDR 91 (290)
T ss_dssp HHTTCSEEEECCSCTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEecCChHHHHHHHHHHH-----HCCCeEEEEec
Confidence 34568999999876554444444332 13578888864
No 142
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=21.09 E-value=32 Score=25.50 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=17.8
Q ss_pred EEEccCCCCCHH-----HHHHHHHHHHcCCCCCcEEEE
Q 031219 56 FIALPGGYGTLE-----ELLEVITWAQLGIHDKPVGLL 88 (163)
Q Consensus 56 fIalPGG~GTLd-----El~e~~~~~qlg~~~kPivll 88 (163)
.|++|||.|+-. ++.+.+ ++...+.|||.-+
T Consensus 72 ~liiPGG~g~~~l~~~~~~~~~l--~~~~~~~k~iaaI 107 (177)
T 4hcj_A 72 AVVFVGGIGCITLWDDWRTQGLA--KLFLDNQKIVAGI 107 (177)
T ss_dssp EEEECCSGGGGGGTTCHHHHHHH--HHHHHTTCEEEEE
T ss_pred EEEECCCccHHHHhhCHHHHHHH--HHHHHhCCEEEEe
Confidence 578899999732 222222 1222457888765
No 143
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=20.77 E-value=2.6e+02 Score=22.08 Aligned_cols=86 Identities=14% Similarity=0.015 Sum_probs=42.3
Q ss_pred CHHHHHHHHHH--hcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCC-----c-
Q 031219 41 GMHQRKAEMAR--QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIA-----P- 112 (163)
Q Consensus 41 ~m~~Rk~~m~~--~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~~Gfw~~l~~~l~~~~~~gfi~-----~- 112 (163)
++.+=.+.+.+ ..++++..--++|+.+|.+ ..+.. ..+|||+++.. |...+--.. +-..|-+- .
T Consensus 192 ~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~~--~~~~~--~~~KPVv~~k~-G~~~~~g~~---~sHtgal~~~~~g~~ 263 (294)
T 2yv1_A 192 RYKEVLDLFEKDDETEAIVMIGEIGGGAEEEA--AKFIE--KMKKPVIGYIA-GQSAPEGKR---MGHAGAIVEKGKGTA 263 (294)
T ss_dssp CHHHHHHHHHTCTTCSEEEEEEESSSSHHHHH--HHHHT--TCSSCEEEEEE-CC----------------------CCH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHH--HHHHH--hCCCCEEEEEe-cCCCCcccc---CCchhhhccCCCCCH
Confidence 33343444443 3446666667777776653 22221 25899999854 444421111 11112221 0
Q ss_pred ------cccccEEEeCCHHHHHHHHHhh
Q 031219 113 ------AARYIIVSAQTAHELICKLEEY 134 (163)
Q Consensus 113 ------~~~~~i~~~~~~ee~~~~l~~~ 134 (163)
-...-+..+++++|+.+.++..
T Consensus 264 ~~~~aa~~~aGv~~~~~~~el~~~~~~~ 291 (294)
T 2yv1_A 264 ESKMKALEEAGAYVAKNISDIPKLLAGI 291 (294)
T ss_dssp HHHHHHHHHHTCEECSSTTHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeCCHHHHHHHHHHH
Confidence 0223578899999999888764
No 144
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=20.75 E-value=1.8e+02 Score=23.03 Aligned_cols=65 Identities=18% Similarity=0.187 Sum_probs=38.1
Q ss_pred HHHHhCCCeEEEEeCCCCCCCcccCCCcceEEecCCHHHHHHHHHHhc--CEEEEccCCCCCHHHHHHHHHHHHcCCCCC
Q 031219 6 QAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQA--DAFIALPGGYGTLEELLEVITWAQLGIHDK 83 (163)
Q Consensus 6 ~ga~~~GG~viGIiP~~~~~~e~~~~~~~~li~~~~m~~Rk~~m~~~s--DafIalPGG~GTLdEl~e~~~~~qlg~~~k 83 (163)
+.|.+.|-.+|||.+..+...+ .++ +.-..+.+.. +..|+.-||+.|.+.+..+... .-
T Consensus 176 ~~A~~~Gad~IGv~~r~l~~~~------------~dl-~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~------Ga 236 (272)
T 3qja_A 176 DRALKAGAKVIGVNARDLMTLD------------VDR-DCFARIAPGLPSSVIRIAESGVRGTADLLAYAGA------GA 236 (272)
T ss_dssp HHHHHHTCSEEEEESBCTTTCC------------BCT-THHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHT------TC
T ss_pred HHHHHCCCCEEEECCCcccccc------------cCH-HHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHc------CC
Confidence 3456778889999754321110 111 1222344444 7788889999999888877643 34
Q ss_pred cEEEEe
Q 031219 84 PVGLLN 89 (163)
Q Consensus 84 Pivlln 89 (163)
--++++
T Consensus 237 dgvlVG 242 (272)
T 3qja_A 237 DAVLVG 242 (272)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 455554
No 145
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=20.65 E-value=98 Score=23.60 Aligned_cols=36 Identities=17% Similarity=0.041 Sum_probs=26.9
Q ss_pred HHHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEE
Q 031219 48 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL 88 (163)
Q Consensus 48 ~m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivll 88 (163)
.+-..+..++.+.|.+++|+++.+.+. .++||+++.
T Consensus 27 ~~~s~~~~ifll~g~I~~L~~iv~~ik-----~~gK~vivh 62 (188)
T 1vkf_A 27 IGEIEPDVVFLLKSDILNLKFHLKILK-----DRGKTVFVD 62 (188)
T ss_dssp CCCCCSSEEEECCEETTTHHHHHHHHH-----HTTCEEEEE
T ss_pred cccCCCCEEEEEeCcHHHHHHHHHHHH-----HCCCeEEEe
Confidence 334456788889999999999887774 247888875
No 146
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=20.62 E-value=65 Score=21.91 Aligned_cols=52 Identities=23% Similarity=0.284 Sum_probs=35.0
Q ss_pred cCCCCCcEEEEecCCcchHHHHHHHH-HHHcCCCCccccccEEEe----CCHHHHHHHHHhhc
Q 031219 78 LGIHDKPVGLLNVDGYYNSLLSFIDK-AVDEGFIAPAARYIIVSA----QTAHELICKLEEYV 135 (163)
Q Consensus 78 lg~~~kPivlln~~Gfw~~l~~~l~~-~~~~gfi~~~~~~~i~~~----~~~ee~~~~l~~~~ 135 (163)
++.+-+|++.++.+|.-+.+++.++. +-...+| .+.+. +|.+++.+.|++..
T Consensus 14 ~ah~l~pvv~IGk~GlT~~vi~ei~~aL~~~ELI------KVkvl~~~~~~~~e~a~~la~~t 70 (98)
T 1jo0_A 14 LAHHLNPVVMLGGNGLTEGVLAEIENALNHHELI------KVKVAGADRETKQLIINAIVRET 70 (98)
T ss_dssp HHTTBCCSEEECTTCSCHHHHHHHHHHHHHHSEE------EEEETTCCHHHHHHHHHHHHHHH
T ss_pred HhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCeE------EEEEeCCCHHHHHHHHHHHHHHh
Confidence 33456899999999999999999976 4343333 23333 34566677776643
No 147
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=20.29 E-value=1.4e+02 Score=21.12 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=12.3
Q ss_pred HHHhcCEEEEccCCCCC
Q 031219 49 MARQADAFIALPGGYGT 65 (163)
Q Consensus 49 m~~~sDafIalPGG~GT 65 (163)
+.+.||..+.+|.+-..
T Consensus 151 L~~~ad~~l~~~~~~~~ 167 (188)
T 1tk9_A 151 MNKLCDHNLVVPSDDTA 167 (188)
T ss_dssp HHHHCSEEEEESCSCHH
T ss_pred hHHcCCEEEEeCCCCHH
Confidence 45678888888876544
No 148
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=20.22 E-value=1.7e+02 Score=21.88 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=22.9
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
+-...|++|+.|.....+.+..+.+. ..+.|+|+++.
T Consensus 54 ~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (283)
T 2ioy_A 54 IQQKVDVLLINPVDSDAVVTAIKEAN-----SKNIPVITIDR 90 (283)
T ss_dssp HHTTCSEEEECCSSTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEeCCchhhhHHHHHHHH-----HCCCeEEEecC
Confidence 34568999998865544445443332 23578888764
No 149
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=20.12 E-value=1.7e+02 Score=22.31 Aligned_cols=37 Identities=14% Similarity=0.127 Sum_probs=24.5
Q ss_pred HHHhcCEEEEccCCCCCHHHHHHHHHHHHcCCCCCcEEEEec
Q 031219 49 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 90 (163)
Q Consensus 49 m~~~sDafIalPGG~GTLdEl~e~~~~~qlg~~~kPivlln~ 90 (163)
+-+..|++|+.|.....+.+..+.+. ..+.|+|+++.
T Consensus 54 ~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (313)
T 2h3h_A 54 IAEGVNGIAIAPSDPTAVIPTIKKAL-----EMGIPVVTLDT 90 (313)
T ss_dssp HHTTCSEEEECCSSTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEeCCChHHHHHHHHHHH-----HCCCeEEEeCC
Confidence 34678999999877655555544332 13678888864
Done!