BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031220
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 132/137 (96%), Gaps = 1/137 (0%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNN-DSHVSYSQDRYIFHVKRTD 59
MAI+F+LVARG+VVL+E SAT+TNAS+I++QIL+K+PGN+ DSH+SYSQDRYIFHVKRTD
Sbjct: 1 MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTD 60
Query: 60 GLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYS 119
GLTVLCMAD+TAGR IPFAFL+DIHQRFVKTYGRA+ SAQAY MNDEFSRVLSQQME+YS
Sbjct: 61 GLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYS 120
Query: 120 DDPNADRINRIKGEMSQ 136
+DPNADR++RIKGEMSQ
Sbjct: 121 NDPNADRMSRIKGEMSQ 137
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 111/136 (81%), Positives = 128/136 (94%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
M+IL++LVARG+VVLAE S T+TNAS IA+QIL+KIPGN DSHVSYSQDRY+FHVKRTDG
Sbjct: 1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDG 60
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
LTVLCMAD+ AGRRIPF+FLEDIHQRFV+TYGRA+ SAQAY MNDEFSRVL+QQ+EYYS+
Sbjct: 61 LTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSN 120
Query: 121 DPNADRINRIKGEMSQ 136
DPNAD I+RIKGEM+Q
Sbjct: 121 DPNADTISRIKGEMNQ 136
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 242 bits (617), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 110/136 (80%), Positives = 131/136 (96%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
MAIL++LVARG+VVL+E +AT+TNAS IA+QIL+K+PG+NDS+VSYSQDRY+FHVKRTDG
Sbjct: 1 MAILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDG 60
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
LTVLCMA++TAGRRIPFAFLEDIHQRFV+TYGRAV +A AY MN+EFSRVLSQQ++YYS+
Sbjct: 61 LTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYSN 120
Query: 121 DPNADRINRIKGEMSQ 136
DPNADRINRIKGEM+Q
Sbjct: 121 DPNADRINRIKGEMNQ 136
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 112/142 (78%), Gaps = 2/142 (1%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKI-PGNNDSHVSYSQDRYIFHVKRTD 59
MAI++++VARG+VVLAE SA N A+ R+IL+K+ P +D + +SQDRYIFH+ R+D
Sbjct: 1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSD 60
Query: 60 GLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYS 119
GLT LCMA+DT GRR+PF++LE+IH RF+K YG+ +A AY MNDEFSRVL QQME++S
Sbjct: 61 GLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFS 120
Query: 120 DDPNADRINRIKGEMSQETRSA 141
+P+ D +NR++GE+S E RS
Sbjct: 121 SNPSVDTLNRVRGEVS-EIRSV 141
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
M I++SLVARGS VLAE ++T N I R+ILD IP N D+ +SY ++YIFH +D
Sbjct: 1 MPIIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPN-DTKMSYVYEKYIFHYLVSDT 59
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
LT LCMAD+ GRRIPF FL+D+ RF YG +A AYGMN +FSR L M++YS+
Sbjct: 60 LTYLCMADEEFGRRIPFTFLDDVKNRFKSMYGDKGKTAIAYGMNSDFSRTLENLMDHYSN 119
Query: 121 DPNADRINRIKGEMSQ 136
D ++R E+ +
Sbjct: 120 TTRVDTMSRTMAEIDE 135
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDR 59
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
+ LC+ DD R F FL ++ +RF TYG +A Y MN EFS VL+ Q++++S+
Sbjct: 60 IVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 121 DPNADRINRIKGEMSQ 136
+ + DR+ + ++ +
Sbjct: 120 NQSLDRVTETQAQVDE 135
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDR 59
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
+ LC+ DD R F FL +I +RF TYG +A Y MN EFS VL+ Q++Y+S+
Sbjct: 60 IIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKYHSE 119
Query: 121 DPNADRINRIKGEMSQ 136
D++ + ++ +
Sbjct: 120 SKGTDQVAETQAQVDE 135
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDR 59
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
+ LC+ DD R F+FL ++ +RF TYG +A Y MN EFS VL+ Q++++S+
Sbjct: 60 IVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 121 DPNADRINRIKGEMSQ 136
+ + D++ + ++ +
Sbjct: 120 NKSLDKVMETQAQVDE 135
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDR 59
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
+ LC+ DD R F FL +I +RF TYG +A Y MN EFS VL+ Q++++S+
Sbjct: 60 IVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 121 DPNADRINRIKGEMSQ 136
+ D++ + ++ +
Sbjct: 120 NKGLDKVMETQAQVDE 135
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
MAILF++VARG+ +LA+ + N + QIL KIP N+ ++YS Y+FH D
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDR 59
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
+ LC+ DD R F FL +I +RF TYG +A Y MN EFS VL+ Q++++S+
Sbjct: 60 IVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 121 DPNADRINRIKGEMSQ 136
+ D++ + ++ +
Sbjct: 120 NKGLDKVMETQAQVDE 135
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 1 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDG 60
MAILF++VARG+ +LA+ + N + QIL KIP N+ ++Y Y+FH D
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYPHGNYLFHYICQDR 59
Query: 61 LTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
+ LC+ DD R F FL +I +RF TYG +A Y MN EFS VL+ Q++++S+
Sbjct: 60 IVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 121 DPNADRINRIKGEMSQ 136
+ D++ + ++ +
Sbjct: 120 NKGLDKVMETQAQVDE 135
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
Query: 2 AILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGL 61
++++S VARG+V+L E + N ++IA Q L K+P +N+ +Y+ D + F+ DG
Sbjct: 5 SLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNK-FTYNCDGHTFNYLVEDGF 63
Query: 62 TVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRA-VLSAQAYGMNDEFSRVLSQQMEYYSD 120
T +A D+AGR+IP +FLE + + F K YG +AQA +N EF L + M+Y D
Sbjct: 64 TYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMD 123
Query: 121 DPNA-DRINRIKGEMSQ 136
P+ ++ ++K ++S+
Sbjct: 124 HPDEISKLAKVKAQVSE 140
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
Query: 2 AILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGL 61
++++S VARG+V+L E + N ++IA Q L K+P +N+ +Y+ D + F+ +G
Sbjct: 5 SLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNK-FTYNCDGHTFNYLVENGF 63
Query: 62 TVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRA-VLSAQAYGMNDEFSRVLSQQMEYYSD 120
T +A D+AGR+IP AFLE + + F K YG +AQA +N EF L + M+Y D
Sbjct: 64 TYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMD 123
Query: 121 DPNA-DRINRIKGEMSQ 136
P+ ++ ++K ++S+
Sbjct: 124 HPDEISKLAKVKAQVSE 140
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 84/137 (61%), Gaps = 3/137 (2%)
Query: 2 AILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGL 61
++++S VARG+V+LAE + N +++A Q L K+P +N+ +Y+ D + F+ +G
Sbjct: 5 SLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNK-FTYNCDGHTFNYLADNGF 63
Query: 62 TVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLS-AQAYGMNDEFSRVLSQQMEYYSD 120
T + ++AGR+IP AFLE + + F K YG S A+A +N EF L + M+Y +D
Sbjct: 64 TYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCAD 123
Query: 121 DPNA-DRINRIKGEMSQ 136
P +++++K ++++
Sbjct: 124 HPEEISKLSKVKAQVTE 140
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
Query: 3 ILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLT 62
+++S VARG+V+L E + N +A+A Q L K+P +N+ +Y+ D + F+ +G T
Sbjct: 71 LIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKF-TYNCDGHTFNYLVENGFT 129
Query: 63 VLCMADDTAGRRIPFAFLEDIHQRFVKTYGRA-VLSAQAYGMNDEFSRVLSQQMEYYSDD 121
+A ++ GR+IP AFLE + + F K YG +AQA +N EF L + M+Y D
Sbjct: 130 YCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDH 189
Query: 122 PN-ADRINRIKGEMSQ 136
P+ ++ ++K ++++
Sbjct: 190 PDEISKLAKVKAQVTE 205
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 2 AILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGL 61
++ +S +ARG+V+L E + N +++A Q L+ +P +N+ +Y+ D + F+ +G
Sbjct: 5 SLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNK-FTYNCDGHTFNDLVENGF 63
Query: 62 TVLCMADDTAGRRIPFAFLEDIHQRFVKTY-GRAVLSAQAYGMNDEFSRVLSQQMEYYSD 120
T +A D+AGR IP AFLE + + F K Y G + QA +N EF L + M+Y D
Sbjct: 64 TYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMD 123
Query: 121 DPN 123
P+
Sbjct: 124 HPD 126
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 22/156 (14%)
Query: 2 AILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGL 61
+++S VA+G+VVLAE + + N S IA Q L K+P N S +YS D + F+ +G
Sbjct: 5 GLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLP-TNSSKYTYSCDGHTFNFLVDNGF 63
Query: 62 TVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQ--------------------AY 101
L +AD++ GR +PF FLE + + F K Y ++ + + AY
Sbjct: 64 VFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAY 123
Query: 102 GMNDEFSRVLSQQMEYYSDDP-NADRINRIKGEMSQ 136
++ EF +L + M+Y P +++++K ++++
Sbjct: 124 NLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITE 159
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 2 AILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGL 61
+ ++S VARG+++LAE + N +IA Q L K+P +++S +Y+ D + F+ DG
Sbjct: 5 SFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGY 64
Query: 62 TVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLS-AQAYGMNDEFSRVLSQQMEYYSD 120
+A D+ ++I AFLE + F K YG S A A +N EF V+ + M Y D
Sbjct: 65 AYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVD 124
Query: 121 DPNA-DRINRIKGEMSQ 136
+++ ++K ++S+
Sbjct: 125 HAEEIEKLIKVKAQVSE 141
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 3 ILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLT 62
IL++ V+ V L E N +AR+++ KIP S Y+ + + FH + L
Sbjct: 6 ILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPT--SKKIYTSENHNFHYISENDLA 63
Query: 63 VLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDP 122
LC+ + G +IP FL DI Q+F+++YG++ D F RVL ++M+YYS +P
Sbjct: 64 FLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYDPFIRVLEERMKYYS-NP 122
Query: 123 NADRINRIKGEMSQ 136
++++N + ++S+
Sbjct: 123 KSNKMNLVMDQVSE 136
>sp|Q6C880|SEC22_YARLI Protein transport protein SEC22 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC22 PE=3 SV=1
Length = 213
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 3 ILFSLVARGSVVLAECSATATNASAIARQ------ILDKIPGNNDSHVSYSQDRYIFHVK 56
+L +L+ R S L ++ ++ Q + K+ N+ S Y+ H
Sbjct: 2 VLSTLIMRASDGLPLSASVDDGQENLSEQKKQCKLVTQKLSANSADRASIESGNYVIHYL 61
Query: 57 RTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLS--AQAYGMNDEFSRVLSQQ 114
DG+ C+++ + R++ F++L+++ + F K++G+ L + Y EF + +
Sbjct: 62 MKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFV-EFDTFMQKT 120
Query: 115 MEYYSDDPNADRINRIKGEMSQETRSASES 144
Y D ++++ E+ TR +++
Sbjct: 121 KRVYQDTRATHNLDKLNTELQDVTRVMTKN 150
>sp|Q9Y7L0|SEC22_SCHPO Protein transport protein sec22 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec22 PE=3 SV=2
Length = 215
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+ IL ++ ++ S Y FH +G+ LC+ + + R++ F++LE++ F
Sbjct: 35 AKLILKRLSPTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFW 94
Query: 89 KTYGRAVLSA--QAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQETRSASESRL 146
++G L + Y +F + + Y+ D ++++ E+ TR +++
Sbjct: 95 NSFGEEALQPGLRPYAFV-QFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKN-- 151
Query: 147 GVSEAQYGGET 157
+ + Y G++
Sbjct: 152 -IEDLLYRGDS 161
>sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22
PE=2 SV=1
Length = 218
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 38 GNND-SHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVL 96
G ND S +S Y+FH + L M D + +++ F +LED+ F + G +
Sbjct: 46 GQNDASRMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIE 105
Query: 97 SAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQ----ETRSASESRLGVSEAQ 152
+A +F + + + Y D I ++ E+ + TR+ E LGV E
Sbjct: 106 TAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEV-LGVGEKL 164
Query: 153 YGGETSSSRL 162
SSRL
Sbjct: 165 DQVSEMSSRL 174
>sp|Q7ZV15|S22BA_DANRE Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2
SV=1
Length = 215
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 45/106 (42%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + + FH G+ L + + +++ FA+LED+ F
Sbjct: 37 AKQLCRKLNEQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFS 96
Query: 89 KTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEM 134
+ YG V S EF + + ++ Y D + I E+
Sbjct: 97 EQYGAKVPSVSRPYSFIEFDTYIQKTIKSYIDSRARRNLGNINSEL 142
>sp|Q4KM74|SC22B_RAT Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 46/111 (41%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFD 96
Query: 89 KTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQETR 139
+ +G+ V + EF + + + Y D + I E+ R
Sbjct: 97 EQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQR 147
>sp|Q5RAI9|SC22B_PONAB Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2
SV=3
Length = 215
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 46/111 (41%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFD 96
Query: 89 KTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQETR 139
+ +G+ V + EF + + + Y D + I E+ R
Sbjct: 97 EQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQR 147
>sp|O08547|SC22B_MOUSE Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1
SV=3
Length = 215
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 46/111 (41%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFD 96
Query: 89 KTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQETR 139
+ +G+ V + EF + + + Y D + I E+ R
Sbjct: 97 EQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQR 147
>sp|O08595|SC22B_CRIGR Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 46/111 (41%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F
Sbjct: 37 AKQLFRKLNEQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFD 96
Query: 89 KTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQETR 139
+ +G+ V + EF + + + Y D + I E+ R
Sbjct: 97 EQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQR 147
>sp|Q9CQW1|YKT6_MOUSE Synaptobrevin homolog YKT6 OS=Mus musculus GN=Ykt6 PE=2 SV=1
Length = 198
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 42 SHVSYSQDRYIFHVK-RTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGR------A 94
S S + Y+ HV R+D L + +AD R+ F LE + F K R +
Sbjct: 55 SRASVKEQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGS 114
Query: 95 VLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQ 136
+ Q G++D S+ Y + AD +++++ E+ +
Sbjct: 115 PATIQYTGLDDHLSK--------YQNPREADPMSKVQAELDE 148
>sp|O75396|SC22B_HUMAN Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1
SV=4
Length = 215
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 45/111 (40%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + FH G+ L + + + + FA+LED+H F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCDLVLCEAAFPKTLAFAYLEDLHSEFD 96
Query: 89 KTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQETR 139
+ +G+ V + EF + + + Y D + I E+ R
Sbjct: 97 EQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSCARRNLGSINTELQDVQR 147
>sp|Q6P7L4|SC22B_XENTR Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b
PE=2 SV=1
Length = 215
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + FH G+ L + + +++ FA+LED+ F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFD 96
Query: 89 KTYGRAV 95
+ +G+ V
Sbjct: 97 EQHGKKV 103
>sp|Q5ZJW4|SC22B_CHICK Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2
SV=1
Length = 215
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + FH G+ L + + +++ FA+LED+ F
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFD 96
Query: 89 KTYGRAV 95
+ +G+ V
Sbjct: 97 EQHGKKV 103
>sp|Q9ZRD6|YKT61_ARATH VAMP-like protein YKT61 OS=Arabidopsis thaliana GN=YKT61 PE=2 SV=1
Length = 199
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 28 IARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRF 87
+ R + + P + V + + Y H +GL + DD R F+ L + +
Sbjct: 45 VGRTVASRTPPSQRQSVQH--EEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEY 102
Query: 88 VKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQ 136
K++G + SA+ N + L++ + + D AD++ +I+ E+ +
Sbjct: 103 QKSFGESWRSAKE-DSNQPWP-YLTEALNKFQDPAEADKLLKIQRELDE 149
>sp|Q7SXP0|S22BB_DANRE Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2
SV=1
Length = 215
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 29 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFV 88
A+Q+ K+ + + + FH G+ L + + +++ FA+LED+ F
Sbjct: 37 AKQLFRKLNEQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFH 96
Query: 89 KTYGRAV 95
+ +G+ V
Sbjct: 97 EQHGKKV 103
>sp|Q3T000|YKT6_BOVIN Synaptobrevin homolog YKT6 OS=Bos taurus GN=YKT6 PE=2 SV=1
Length = 198
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 42 SHVSYSQDRYIFHVK-RTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQA 100
S S + Y+ HV R D L + +AD R+ F LE + F K R
Sbjct: 55 SRASVKEQEYLCHVYVRNDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPT-- 112
Query: 101 YGMNDEFSRV-LSQQMEYYSDDPNADRINRIKGEMSQ 136
G D L Q+ Y + AD + +++ E+ +
Sbjct: 113 -GSPDTIRYSGLDSQLSRYQNPREADPMTKVQAELDE 148
>sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240 OS=Arabidopsis
thaliana GN=At1g25240 PE=3 SV=1
Length = 376
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 73 RRIPFAF--LEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINR 129
RR+PF D H R KT+G + D++S LS Q+ P D +N+
Sbjct: 109 RRLPFDLSDFSDGHSRPSKTWGFNAFIRAYFSFLDQYSFFLSDQIRRRHKKPQLDSVNQ 167
>sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1
SV=4
Length = 1006
Score = 30.4 bits (67), Expect = 5.7, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 116 EYYSDDPNADRI---NRIKGEMSQETRSASESRLGVSEAQYGGETSSSRL 162
++Y DP+AD + +RI+G +++ A LG+ + G S RL
Sbjct: 190 DHYWTDPSADELVQRHRIRGPPTRQDSPAKRPALGIRKRHSSGSASEDRL 239
>sp|Q97EB0|TILS_CLOAB tRNA(Ile)-lysidine synthase OS=Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=tilS PE=3 SV=1
Length = 461
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 53 FHVKRTDGLTVL---CMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSR 109
F+VKR D + ++ + AGR I +AF E++ +RF +A A A+ ND+
Sbjct: 81 FYVKRVDVNKIAHEKKISSEMAGREIRYAFFEEVKERF-----KANKIAIAHNANDQAET 135
Query: 110 VL 111
++
Sbjct: 136 IM 137
>sp|Q9LVM9|YKT62_ARATH VAMP-like protein YKT62 OS=Arabidopsis thaliana GN=YKT62 PE=2 SV=1
Length = 199
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 28 IARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRF 87
IAR + + P V + + Y H +GL + DD R F+ L + +
Sbjct: 47 IARTVARRTPPGQRQSVKHEE--YKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVY 104
Query: 88 VKTYG---RAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQ 136
K YG R S+Q + L + + + D AD++ +I+ E+ +
Sbjct: 105 QKDYGDTWRFENSSQPWPY-------LKEASDKFRDPAEADKLLKIQRELDE 149
>sp|Q6CJA0|SEC22_KLULA Protein transport protein SEC22 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC22 PE=3 SV=1
Length = 214
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 54 HVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYG 92
H R + + + +A+ R + F++L DI Q F +YG
Sbjct: 59 HYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYG 97
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,028,566
Number of Sequences: 539616
Number of extensions: 1920816
Number of successful extensions: 5038
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4982
Number of HSP's gapped (non-prelim): 46
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)