Citrus Sinensis ID: 031224

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
Protein Sequence
MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGIN
Secondary Structure (PSIPRED)
cEEEcccccHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccHccccHHHcccccccccccEEEEEEEccccccHHHHHcccccccccHHHHHEEEEEHHcccccccccccccccHHHHHHHHHHHHHHHHcccHHccccccHHHHccccccccccHHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHcHcccccc
Coil and Loop (DISEMBL)
mtahvgdfgltrfipeairsnqsssiglkgtvgyappeygmgsrvstygdVYSYGILLLEtftgkrptsdifaeglDLHNFvknalpeqisevldplfvtggeegegtaeeKLKQDQVQESLATILKIGVAcsvesprermdiSDVVNNLQKVKSTLLRCGIN
Flexible Loop (DISEMBL)
mtahvgdfgltrfipeairsnqsssiglkGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVAcsvesprermdisdvvnnlqkvkstllrcgin
Low Complexity Region (SEG)
MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVtggeegegtaeeKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGIN
Disordered region (IsUnstruct)
******DFGLTRFIPEAI*******IGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVT*********************LATILKIGVACSVE*******ISDVVNNLQKVKSTLL*****
Disordered Region (DISOPRED)
MTAHVGDFGLTRFI***************GTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEE*********KQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGI*
Disordered Region (DISEMBL)
MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGIN
Disordered Region (DISPRO)
MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGIN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	163	2.2.26 [Sep-21-2011]
Q9SD62	1025	Putative receptor-like pr	no	no	0.920	0.146	0.404	2e-29
C0LGP4	1010	Probable LRR receptor-lik	no	no	0.914	0.147	0.417	1e-27
C0LGT6	1031	LRR receptor-like serine/	no	no	0.846	0.133	0.403	3e-26
Q9ZUI0	980	Putative leucine-rich rep	no	no	0.957	0.159	0.369	5e-26
Q9LYN8	1192	Leucine-rich repeat recep	no	no	0.803	0.109	0.375	2e-17
Q9M0G7	1013	Leucine-rich repeat recep	no	no	0.834	0.134	0.326	4e-16
O22476	1196	Protein BRASSINOSTEROID I	no	no	0.846	0.115	0.375	1e-15
O49318	1124	Probable leucine-rich rep	no	no	0.791	0.114	0.333	1e-15
Q9C7S5	1095	Tyrosine-sulfated glycope	no	no	0.803	0.119	0.327	4e-15
C0LGQ5	1249	LRR receptor-like serine/	no	no	0.754	0.098	0.306	5e-15

>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1

 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 99/163 (60%), Gaps = 13/163 (7%)

Query: 1    MTAHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            +TAHV DFGL + + +  R     Q SS G++GT+GYA PEYGMG   S  GDVYS+GI+
Sbjct: 868  LTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIV 927

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPE-QISEVLDPLFVTGGEEGEGTAEEKLKQD 116
            LLE FTGKRPT+ +F +GL LH+F K+AL + Q  ++ D   + G            +  
Sbjct: 928  LLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYA---------QHF 978

Query: 117  QVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
             + E L  + ++GV+CS ESP  R+ +++ ++ L  ++ +  R
Sbjct: 979  NMVECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFR 1021

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 96/163 (58%), Gaps = 14/163 (8%)

Query: 1    MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            +TAHV DFGL R +    E    NQ SS G++GT+GYA PEYG+G + S  GDVYS+GIL
Sbjct: 851  LTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGIL 910

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQD- 116
            LLE FTGKRPT+++F     L+++ K+ALPE+I +++D          E      L+   
Sbjct: 911  LLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVD----------ESILHIGLRVGF 960

Query: 117  QVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
             V E L  + ++G+ C  ESP  R+  S VV  L  ++    +
Sbjct: 961  PVVECLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFFK 1003

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1

 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 23/161 (14%)

Query: 1    MTAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            +TAHV DFGL + + +  R    NQ SS G++GT+GYA PEYGMG + S  GDVYS+GIL
Sbjct: 861  LTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGIL 920

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQ 117
            LLE F+GK+PT + FA   +LH++ K+ L    S        +GG             + 
Sbjct: 921  LLEMFSGKKPTDESFAGDYNLHSYTKSILSGCTS--------SGGS------------NA 960

Query: 118  VQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL 158
            + E L  +L++G+ CS E PR+RM   + V  L  ++S   
Sbjct: 961  IDEGLRLVLQVGIKCSEEYPRDRMRTDEAVRELISIRSKFF 1001

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=3 SV=1

 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 12/168 (7%)

Query: 1   MTAHVGDFGLTRFIP---EAIRSNQSSSIG-----LKGTVGYAPPEYGMGSRVSTYGDVY 52
           MTA V DFG++R +    E + ++ S S G     L G+VGY  PEYGMG R ST+GDVY
Sbjct: 800 MTALVTDFGISRLVQGVEETVSTDDSVSFGSTDGLLCGSVGYIAPEYGMGKRASTHGDVY 859

Query: 53  SYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEK 112
           S+G+LLLE  +G+RPT  +  EG  LH F+K+  P+ +  +++        +G+    EK
Sbjct: 860 SFGVLLLEIVSGRRPTDVLVNEGSSLHEFMKSHYPDSLEGIIEQALSRWKPQGKPEKCEK 919

Query: 113 LKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRC 160
           L ++ + E    ++++G+ C+  +P  R D+ DV + + ++K  L  C
Sbjct: 920 LWREVILE----MIELGLVCTQYNPSTRPDMLDVAHEMGRLKEYLFAC 963

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 21/152 (13%)

Query: 5    VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
            V DFGL R I  A  S+ S+ I   GT GY PPEYG  +R +T GDVYS+G++LLE  TG
Sbjct: 1059 VADFGLARLI-SACESHVSTVIA--GTFGYIPPEYGQSARATTKGDVYSFGVILLELVTG 1115

Query: 65   KRPTSDIF--AEGLDLHNFVKNALPE-QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQES 121
            K PT   F  +EG +L  +    + + +  +V+DPL V+            LK  Q++  
Sbjct: 1116 KEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVA----------LKNSQLR-- 1163

Query: 122  LATILKIGVACSVESPRERMDISDVVNNLQKV 153
               +L+I + C  E+P +R ++ DV+  L+++
Sbjct: 1164 ---LLQIAMLCLAETPAKRPNMLDVLKALKEI 1192

Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M0G7|PXL2_ARATH Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 20/156 (12%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           + A + DFGL R +    R  ++ S+ + G+ GY  PEYG   +V    D+YSYG++LLE
Sbjct: 843 LDARIADFGLARMMA---RKKETVSM-VAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLE 898

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQIS--EVLDPLFVTGGEEGEGTAEEKLKQDQV 118
             TG+RP    F E +D+  +V+  + + IS  E LDP          G          V
Sbjct: 899 LLTGRRPLEPEFGESVDIVEWVRRKIRDNISLEEALDP--------NVGNCR------YV 944

Query: 119 QESLATILKIGVACSVESPRERMDISDVVNNLQKVK 154
           QE +  +L+I + C+ + P++R  + DV++ L + K
Sbjct: 945 QEEMLLVLQIALLCTTKLPKDRPSMRDVISMLGEAK 980

Involved in the regulation of procambium maintenance and polarity during vascular-tissue development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O22476|BRI1_ARATH Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 83/157 (52%), Gaps = 19/157 (12%)

Query: 1    MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            + A V DFG+ R +  A+ ++ S S  L GT GY PPEY    R ST GDVYSYG++LLE
Sbjct: 1021 LEARVSDFGMARLM-SAMDTHLSVST-LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLE 1078

Query: 61   TFTGKRPT-SDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQ 119
              TGKRPT S  F +  +L  +VK     +IS+V DP              E +K+D   
Sbjct: 1079 LLTGKRPTDSPDFGDN-NLVGWVKQHAKLRISDVFDP--------------ELMKEDPAL 1123

Query: 120  E-SLATILKIGVACSVESPRERMDISDVVNNLQKVKS 155
            E  L   LK+ VAC  +    R  +  V+   +++++
Sbjct: 1124 EIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEIQA 1160

Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. Binds brassinolide, and less effectively castasterone, but not 2,3,22,23-O-tetramethylbrassinolide or ecdysone. May be involved in a feedback regulation of brassinosteroid biosynthesis. Phosphorylates BRI1-associated receptor kinase 1 (BAK1), Transthyretin-Like protein (TTL) and SERK1 on 'Ser-299' and 'Thr-462' in vitro. May have a guanylyl cyclase activity.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 18/147 (12%)

Query: 3    AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
            AHVGDFGL + I   +  + S+   + G+ GY  PEY    +V+   D+YS+G++LLE  
Sbjct: 966  AHVGDFGLAKVIDMPLSKSVSA---VAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELL 1022

Query: 63   TGKRPTSDIFAEGLDLHNFVKNALPEQ--ISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
            TGK P   +  +G DL  + +N + +    SE+LDP               K++ D +  
Sbjct: 1023 TGKAPVQPL-EQGGDLATWTRNHIRDHSLTSEILDPYLT------------KVEDDVILN 1069

Query: 121  SLATILKIGVACSVESPRERMDISDVV 147
             + T+ KI V C+  SP +R  + +VV
Sbjct: 1070 HMITVTKIAVLCTKSSPSDRPTMREVV 1096

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9C7S5|PSYR1_ARATH Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 28/159 (17%)

Query: 3    AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
            A+V DFGL+R I    R++ ++   L GT+GY PPEYG     +  GDVYS+G+++LE  
Sbjct: 943  AYVADFGLSRLI-LPYRTHVTTE--LVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELL 999

Query: 63   TGKRPTSDIFAEGLD------LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQD 116
            TGKRP  ++F   +       +H   ++  PE   EV D L    G E            
Sbjct: 1000 TGKRPM-EVFRPKMSRELVAWVHTMKRDGKPE---EVFDTLLRESGNE------------ 1043

Query: 117  QVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS 155
               E++  +L I   C  ++P +R +I  VV+ L+ +++
Sbjct: 1044 ---EAMLRVLDIACMCVNQNPMKRPNIQQVVDWLKNIEA 1079

Tyrosine-sulfated glycopeptide receptor with a serine/threonine-protein kinase activity. Regulates, in response to tyrosine-sulfated glycopeptide binding, a signaling cascade involved in cellular proliferation and plant growth. Not involved in PSK perception.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 24/147 (16%)

Query: 1    MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            M AH+GDFGL + + E   +N  S+     + GY  PEY    + +   DVYS GI+L+E
Sbjct: 1096 MEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLME 1155

Query: 61   TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQV-- 118
              TGK PT  +F   +D+  +V+  L                 E  G+A +KL   ++  
Sbjct: 1156 IVTGKMPTDSVFGAEMDMVRWVETHL-----------------EVAGSARDKLIDPKLKP 1198

Query: 119  -----QESLATILKIGVACSVESPRER 140
                 +++   +L+I + C+  SP+ER
Sbjct: 1199 LLPFEEDAACQVLEIALQCTKTSPQER 1225

Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
224090977	1034	predicted protein [Populus trichocarpa]	1.0	0.157	0.647	2e-52
147853780	1904	hypothetical protein VITISV_030954 [Viti	0.993	0.085	0.590	4e-50
359482058	1040	PREDICTED: probable LRR receptor-like se	0.993	0.155	0.584	6e-50
224097750	1023	predicted protein [Populus trichocarpa]	0.969	0.154	0.592	1e-48
224097752	1025	predicted protein [Populus trichocarpa]	0.969	0.154	0.586	4e-48
224127492	1022	predicted protein [Populus trichocarpa]	0.957	0.152	0.602	2e-47
224113117	1006	predicted protein [Populus trichocarpa]	0.969	0.157	0.579	7e-47
224097748	1032	predicted protein [Populus trichocarpa]	0.987	0.156	0.529	1e-44
359486510	965	PREDICTED: probable LRR receptor-like se	1.0	0.168	0.523	2e-44
255576770	851	serine-threonine protein kinase, plant-t	0.969	0.185	0.515	3e-44

>gi|224090977|ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|222855108|gb|EEE92655.1| predicted protein [Populus trichocarpa]

 Score =  209 bits (533), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/173 (64%), Positives = 129/173 (74%), Gaps = 10/173 (5%)

Query: 1    MTAHVGDFGLTRFIPEAI---RSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            MTAHVGDFGL RFI EAI     N+SSS+GLKGTVGYA PEYGMGS+ S  GDVYSYGIL
Sbjct: 862  MTAHVGDFGLARFIEEAINPSHRNESSSVGLKGTVGYAAPEYGMGSKPSMNGDVYSYGIL 921

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEG-------EGTAE 110
            LLE FTGKRPT D+F +GLDLHNFVK ALP+QISEV+DPLFVTGGE         E    
Sbjct: 922  LLEMFTGKRPTDDMFHDGLDLHNFVKTALPDQISEVVDPLFVTGGEGDEEETGHLENRTR 981

Query: 111  EKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGIN 163
             ++K+DQ+QESL  IL+IG+ACSVES  ER ++ DV+  LQ V+   L  G N
Sbjct: 982  GQIKKDQMQESLIAILRIGIACSVESINERKNVKDVLTELQNVRRFFLGSGRN 1034

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853780|emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]

 Score =  202 bits (514), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 9/171 (5%)

Query: 1    MTAHVGDFGLTRFIPEAI-RSN--QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            MTAHVGDFGL RFIPEA  RS+  QSSSIGLKGT+GYA PEYGMG++VS  GD YSYGIL
Sbjct: 894  MTAHVGDFGLARFIPEAAGRSHPSQSSSIGLKGTIGYAAPEYGMGTKVSALGDTYSYGIL 953

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTG-GEEGEGTAEE----- 111
            LLE FTGKRPT  +F++ L+LHNFVK ALPE+I++++DP F++   +E E TA +     
Sbjct: 954  LLEMFTGKRPTESMFSDQLNLHNFVKMALPERIADIIDPFFLSSEAKEEETTAADSSNLA 1013

Query: 112  KLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGI 162
             +K++++ E L +IL+IGV+CS+ESPRERM I++ +  LQ ++  LL  GI
Sbjct: 1014 HMKREKMHECLISILRIGVSCSLESPRERMAITEAIKELQLIRKILLGNGI 1064

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482058|ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  201 bits (512), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 100/171 (58%), Positives = 132/171 (77%), Gaps = 9/171 (5%)

Query: 1    MTAHVGDFGLTRFIPEAI-RSN--QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            MTAHVGDFGL RFIPEA  RS+  QSSSIGLKGT+GYA PEYGMG++VS  GD YSYGIL
Sbjct: 863  MTAHVGDFGLARFIPEAAGRSHPSQSSSIGLKGTIGYAAPEYGMGTKVSALGDTYSYGIL 922

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTG-GEEGEGTAEE----- 111
            LLE FTGKRPT  +F++ L+LHNFVK ALPE+I++++DP F++   +E E TA +     
Sbjct: 923  LLEMFTGKRPTESMFSDQLNLHNFVKMALPERIADIIDPFFLSSEAKEEETTAADSSNLA 982

Query: 112  KLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGI 162
             +K++++ E L +IL+IGV+CS+ESPRERM I++ +  LQ ++  LL  G+
Sbjct: 983  HMKREKMHECLISILRIGVSCSLESPRERMAITEAIKELQLIRKILLGNGV 1033

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097750|ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|222850886|gb|EEE88433.1| predicted protein [Populus trichocarpa]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/162 (59%), Positives = 119/162 (73%), Gaps = 4/162 (2%)

Query: 1    MTAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            MTAHVGDFGL R +P+A      +Q+SSIGLKGT+GYA PEYG+GS VS YGDVYSYGIL
Sbjct: 854  MTAHVGDFGLARLLPQASHQLCLDQTSSIGLKGTIGYAAPEYGLGSEVSPYGDVYSYGIL 913

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQ-D 116
            LLE FTG+RPT+ +F +GL+LHNF K ALP  ++EVLDP+ VT  EE  G A  ++    
Sbjct: 914  LLEVFTGRRPTNGLFKDGLNLHNFAKTALPISVAEVLDPVLVTEAEETSGDASRRMSHIG 973

Query: 117  QVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL 158
               E LA I+K+GVACS E PRERM+IS V   L++++  LL
Sbjct: 974  NHMECLAAIVKVGVACSAEFPRERMEISSVAVELRRIRHILL 1015

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097752|ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1| predicted protein [Populus trichocarpa]

 Score =  195 bits (496), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 95/162 (58%), Positives = 118/162 (72%), Gaps = 4/162 (2%)

Query: 1    MTAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            +TAHVGDFGL R +P+A      +Q+SSIGLKGT+GYA PEYG+GS VS YGDVYSYGIL
Sbjct: 856  LTAHVGDFGLARLLPQASHQLCLDQTSSIGLKGTIGYAAPEYGLGSEVSPYGDVYSYGIL 915

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQ-D 116
            LLE FTG+RPT  +F +GL+LHNF K ALP  ++EVLDP+ VT  EE  G A  ++    
Sbjct: 916  LLEVFTGRRPTDGLFKDGLNLHNFAKTALPISVAEVLDPVLVTEAEETSGDASRRMSHIG 975

Query: 117  QVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL 158
               E LA I+K+GVACS E PRERM+IS V   L++++  LL
Sbjct: 976  NHMECLAAIVKVGVACSAEFPRERMEISSVAVELRRIRHILL 1017

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127492|ref|XP_002329291.1| predicted protein [Populus trichocarpa] gi|222870745|gb|EEF07876.1| predicted protein [Populus trichocarpa]

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 118/161 (73%), Gaps = 5/161 (3%)

Query: 1    MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            MTAHVGDFGL RF  EA  SNQ+SS+GLKGT+GYA PEYG+G +VSTYGDVYSYGILLLE
Sbjct: 858  MTAHVGDFGLARFHSEA--SNQTSSVGLKGTIGYAAPEYGIGGKVSTYGDVYSYGILLLE 915

Query: 61   TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQ---DQ 117
             FTGKRP   +F +GL+LH++ K ALP++I EV+DPL V        + E  +      +
Sbjct: 916  MFTGKRPVDGMFKDGLNLHSYAKMALPDRIVEVVDPLLVREIRSVNSSDEMGMYHIGPHE 975

Query: 118  VQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL 158
            +   L TI+K+GVACSVE PRERMDI DVV  L ++K TLL
Sbjct: 976  ISACLMTIIKMGVACSVELPRERMDIGDVVTELNRIKDTLL 1016

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113117|ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|222865436|gb|EEF02567.1| predicted protein [Populus trichocarpa]

 Score =  191 bits (486), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 95/164 (57%), Positives = 123/164 (75%), Gaps = 6/164 (3%)

Query: 1    MTAHVGDFGLTRFIPEA---IRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            MTAHVGDFGL RF PEA   + SNQ+SSIGLKGTVGYA PEYG+G+ VSTYGDVYSYGIL
Sbjct: 837  MTAHVGDFGLARFRPEASVQLSSNQNSSIGLKGTVGYAAPEYGIGNEVSTYGDVYSYGIL 896

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQ-- 115
            LLE  TGK PT   F EGL+LH +VK ALP+++ EV+DP+ +   E+    A + +K+  
Sbjct: 897  LLEILTGKTPTDGSFKEGLNLHKYVKMALPDRVVEVVDPILLREIEQTSANASDGMKRIG 956

Query: 116  -DQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL 158
             D+V E L +I+++GV+CSV+ PRER +IS+VV  L +++  LL
Sbjct: 957  NDKVLECLVSIMEVGVSCSVDLPRERTNISNVVAELHRIRGILL 1000

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097748|ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/170 (52%), Positives = 118/170 (69%), Gaps = 9/170 (5%)

Query: 1    MTAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
            +TAHVGDFGL R + +A      +Q+SSIGLKGT+GYA PEYGMGS VST+GDVYSYGIL
Sbjct: 856  LTAHVGDFGLARLLTQASHQPGLDQTSSIGLKGTIGYAAPEYGMGSEVSTFGDVYSYGIL 915

Query: 58   LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEG------TAEE 111
            LLE FTGKRPT  +F + ++LHNF K A P +++E+LDP  V   EE         +A  
Sbjct: 916  LLEMFTGKRPTDTMFKDEMNLHNFAKMASPNRVTEILDPALVREAEETSADHASTSSARN 975

Query: 112  KLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCG 161
                +++ E L  I+K+GVAC+VESPRER+DIS+V   L +++  L+  G
Sbjct: 976  HNGTEKIMECLVLIIKVGVACAVESPRERIDISNVATELYRIRKILIGTG 1025

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486510|ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like, partial [Vitis vinifera]

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/168 (52%), Positives = 117/168 (69%), Gaps = 5/168 (2%)

Query: 1   MTAHVGDFGLTRFIPEA---IRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
           MT HVGDFG+ +F+PEA   +   QSSSIG++GT+GYA PEYGMGS VST GDVYS+GIL
Sbjct: 788 MTGHVGDFGIAKFLPEAATRVPEIQSSSIGIRGTIGYAAPEYGMGSEVSTSGDVYSFGIL 847

Query: 58  LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEK--LKQ 115
           LLE FTGKRPT D+F + L++HNFVK A+PE+++E+ DP+ +  G E + T  ++     
Sbjct: 848 LLEMFTGKRPTEDMFKDSLNIHNFVKTAVPERVAEIADPVLLQEGVEMDNTTSQRRMASS 907

Query: 116 DQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGIN 163
              QE L +I  IG+ACS E PRER +I+D    L  V+   L  G++
Sbjct: 908 HDAQECLISIFGIGLACSAELPRERKNITDAAAELNSVRDIFLGTGLH 955

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576770|ref|XP_002529272.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223531261|gb|EEF33104.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  182 bits (463), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 83/161 (51%), Positives = 119/161 (73%), Gaps = 3/161 (1%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           M AH+GDFGL +F+P+     QSSS+G++GT+GYAPPEYG+GS VST GDVYSYGILLLE
Sbjct: 687 MVAHIGDFGLAKFLPQLANPAQSSSMGVRGTIGYAPPEYGLGSEVSTSGDVYSYGILLLE 746

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGE--EGEGTAEEKLKQDQV 118
             TGK+PT D F    +LH+  + ALP+++SE++DP+ + G E    +G+ E K    +V
Sbjct: 747 MMTGKKPTDDNFTGNHNLHSICRMALPDEVSEIVDPILLQGDETNNNQGSMEPKAADSKV 806

Query: 119 QESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
           +  L +++K+G+ACS+ESP++RMDIS+ + NL  +KS  +R
Sbjct: 807 K-CLISMIKVGIACSMESPQDRMDISNALTNLHYIKSNYIR 846

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
TAIR|locus:2175703	502	AT5G39390 [Arabidopsis thalian	0.527	0.171	0.561	2.2e-28
TAIR|locus:2079157	1011	AT3G47580 [Arabidopsis thalian	0.920	0.148	0.401	8.8e-27
TAIR|locus:2075661	1025	AT3G47110 [Arabidopsis thalian	0.920	0.146	0.398	1.9e-26
TAIR|locus:2079142	1010	AT3G47570 [Arabidopsis thalian	0.920	0.148	0.407	1.3e-25
TAIR|locus:2149922	1031	EFR "EF-TU receptor" [Arabidop	0.527	0.083	0.539	4.3e-25
UNIPROTKB|Q40640	1025	Xa21 "Receptor kinase-like pro	0.957	0.152	0.377	4.6e-25
TAIR|locus:2075631	1009	AT3G47090 [Arabidopsis thalian	0.920	0.148	0.388	5.8e-25
TAIR|locus:2047525	980	AT2G24130 [Arabidopsis thalian	0.957	0.159	0.357	3.3e-22
TAIR|locus:2182870	1192	EMS1 "EXCESS MICROSPOROCYTES1"	0.803	0.109	0.375	5.4e-16
TAIR|locus:2139885	1013	AT4G28650 [Arabidopsis thalian	0.834	0.134	0.320	2.2e-14

TAIR|locus:2175703 AT5G39390 [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
 Identities = 50/89 (56%), Positives = 63/89 (70%)

Query:     1 MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
             +TAHV DFGL R +    E    NQ SS G++GT+GYA PEYGMGS+ S  GDVYS+G+L
Sbjct:   358 LTAHVSDFGLARLLYNFDEKTFLNQFSSAGVRGTIGYAAPEYGMGSKPSIQGDVYSFGVL 417

Query:    58 LLETFTGKRPTSDIFAEGLDLHNFVKNAL 86
             LLE FTGK+PT + F  G +LH + K+ L
Sbjct:   418 LLEMFTGKKPTDNSFGGGYNLHGYTKSVL 446

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 8.8e-27, P = 8.8e-27
 Identities = 65/162 (40%), Positives = 94/162 (58%)

Query:     1 MTAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
             +TAHV DFGL R + +  +    NQ SS G++GT+GYA PEYGMG + S +GDVYS+G+L
Sbjct:   852 LTAHVSDFGLARLLLKFDKESFLNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDVYSFGVL 911

Query:    58 LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXKLKQDQ 117
             LLE FTGKRPT ++F   L LH++ K ALPE++ E+ D   +                 +
Sbjct:   912 LLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKAILHIGLRVGF---------R 962

Query:   118 VQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
               E L  +L++G+ C  E P  R+  S+V   L  ++    +
Sbjct:   963 TAECLTLVLEVGLRCCEEYPTNRLATSEVAKELISIRERFFK 1004

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 65/163 (39%), Positives = 98/163 (60%)

Query:     1 MTAHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
             +TAHV DFGL + + +  R     Q SS G++GT+GYA PEYGMG   S  GDVYS+GI+
Sbjct:   868 LTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIV 927

Query:    58 LLETFTGKRPTSDIFAEGLDLHNFVKNALPE-QISEVLDPLFVXXXXXXXXXXXXKLKQD 116
             LLE FTGKRPT+ +F +GL LH+F K+AL + Q  ++ D   +              +  
Sbjct:   928 LLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYA---------QHF 978

Query:   117 QVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
              + E L  + ++GV+CS ESP  R+ +++ ++ L  ++ +  R
Sbjct:   979 NMVECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFR 1021

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 66/162 (40%), Positives = 94/162 (58%)

Query:     1 MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
             +TAHV DFGL R +    E    NQ SS G++GT+GYA PEYG+G + S  GDVYS+GIL
Sbjct:   851 LTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGIL 910

Query:    58 LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXKLKQDQ 117
             LLE FTGKRPT+++F     L+++ K+ALPE+I +++D   +                  
Sbjct:   911 LLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGF---------P 961

Query:   118 VQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
             V E L  + ++G+ C  ESP  R+  S VV  L  ++    +
Sbjct:   962 VVECLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFFK 1003

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
 Identities = 48/89 (53%), Positives = 64/89 (71%)

Query:     1 MTAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
             +TAHV DFGL + + +  R    NQ SS G++GT+GYA PEYGMG + S  GDVYS+GIL
Sbjct:   861 LTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGIL 920

Query:    58 LLETFTGKRPTSDIFAEGLDLHNFVKNAL 86
             LLE F+GK+PT + FA   +LH++ K+ L
Sbjct:   921 LLEMFSGKKPTDESFAGDYNLHSYTKSIL 949

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP

GO:0016045 "detection of bacterium" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0002764 "immune response-regulating signaling pathway" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0019199 "transmembrane receptor protein kinase activity" evidence=TAS

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)]

 Score = 297 (109.6 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 60/159 (37%), Positives = 92/159 (57%)

Query:     1 MTAHVGDFGLTRFIPE--AIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILL 58
             M AHVGDFGL R + +  ++    +SS+G  GT+GYA PEYG+G   ST+GD+YSYGIL+
Sbjct:   854 MVAHVGDFGLARILVDGTSLIQQSTSSMGFIGTIGYAAPEYGVGLIASTHGDIYSYGILV 913

Query:    59 LETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXKLKQDQV 118
             LE  TGKRPT   F   L L  +V+  L  ++++V+D   +               + ++
Sbjct:   914 LEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTKLILDSENWLNSTNNSPCR-RI 972

Query:   119 QESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL 157
              E +  +L++G++CS E P  R    D+++ L  +K  L
Sbjct:   973 TECIVWLLRLGLSCSQELPSSRTPTGDIIDELNAIKQNL 1011

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 5.8e-25, P = 5.8e-25
 Identities = 63/162 (38%), Positives = 93/162 (57%)

Query:     1 MTAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
             +TAHV DFGL R + +  +    NQ SS G++GT+GYA PEYGMG + S +GDVYS+G+L
Sbjct:   850 LTAHVSDFGLARLLLKFDQESFFNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDVYSFGVL 909

Query:    58 LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXKLKQDQ 117
             +LE FTGKRPT+++F     L+++ K ALPE++ ++ D   +                  
Sbjct:   910 VLEMFTGKRPTNELFGGNFTLNSYTKAALPERVLDIADKSILHSGLRVGF---------P 960

Query:   118 VQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
             V E L  IL +G+ C  ESP  R+  S+    L  ++    +
Sbjct:   961 VLECLKGILDVGLRCCEESPLNRLATSEAAKELISIRERFFK 1002

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2047525 AT2G24130 [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 60/168 (35%), Positives = 95/168 (56%)

Query:     1 MTAHVGDFGLTRFIP---EAIRSNQSSSIG-----LKGTVGYAPPEYGMGSRVSTYGDVY 52
             MTA V DFG++R +    E + ++ S S G     L G+VGY  PEYGMG R ST+GDVY
Sbjct:   800 MTALVTDFGISRLVQGVEETVSTDDSVSFGSTDGLLCGSVGYIAPEYGMGKRASTHGDVY 859

Query:    53 SYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXK 112
             S+G+LLLE  +G+RPT  +  EG  LH F+K+  P+ +  +++                K
Sbjct:   860 SFGVLLLEIVSGRRPTDVLVNEGSSLHEFMKSHYPDSLEGIIEQALSRWKPQGKPEKCEK 919

Query:   113 LKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRC 160
             L ++ + E    ++++G+ C+  +P  R D+ DV + + ++K  L  C
Sbjct:   920 LWREVILE----MIELGLVCTQYNPSTRPDMLDVAHEMGRLKEYLFAC 963

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 5.4e-16, P = 5.4e-16
 Identities = 57/152 (37%), Positives = 85/152 (55%)

Query:     5 VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
             V DFGL R I  A  S+ S+ I   GT GY PPEYG  +R +T GDVYS+G++LLE  TG
Sbjct:  1059 VADFGLARLI-SACESHVSTVIA--GTFGYIPPEYGQSARATTKGDVYSFGVILLELVTG 1115

Query:    65 KRPTSDIF--AEGLDLHNFVKNALPE-QISEVLDPLFVXXXXXXXXXXXXKLKQDQVQES 121
             K PT   F  +EG +L  +    + + +  +V+DPL V             LK  Q++  
Sbjct:  1116 KEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVA----------LKNSQLR-- 1163

Query:   122 LATILKIGVACSVESPRERMDISDVVNNLQKV 153
                +L+I + C  E+P +R ++ DV+  L+++
Sbjct:  1164 ---LLQIAMLCLAETPAKRPNMLDVLKALKEI 1192

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009556 "microsporogenesis" evidence=IMP

GO:0010234 "tapetal cell fate specification" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2139885 AT4G28650 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 50/156 (32%), Positives = 82/156 (52%)

Query:     1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
             + A + DFGL R +    R  ++ S+ + G+ GY  PEYG   +V    D+YSYG++LLE
Sbjct:   843 LDARIADFGLARMMA---RKKETVSM-VAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLE 898

Query:    61 TFTGKRPTSDIFAEGLDLHNFVKNALPEQIS--EVLDPLFVXXXXXXXXXXXXKLKQDQV 118
               TG+RP    F E +D+  +V+  + + IS  E LDP                 +   V
Sbjct:   899 LLTGRRPLEPEFGESVDIVEWVRRKIRDNISLEEALDP------------NVGNCRY--V 944

Query:   119 QESLATILKIGVACSVESPRERMDISDVVNNLQKVK 154
             QE +  +L+I + C+ + P++R  + DV++ L + K
Sbjct:   945 QEEMLLVLQIALLCTTKLPKDRPSMRDVISMLGEAK 980

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010067 "procambium histogenesis" evidence=ISS

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VI000800 hypothetical protein (1034 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	163
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-10
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-09
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-08
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-08
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	4e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-06
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-06
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-06
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-05
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-05
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	9e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	2e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-04
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	4e-04
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	5e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	7e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	7e-04
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	7e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	8e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.001
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.001
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.001
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.002
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.002
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.002
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.003
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.004
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.004
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.004

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 55.5 bits (134), Expect = 7e-10
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL R++   +    +SS G K  V +APPE    SR S+  DV+S+G+L+ E F+ 
Sbjct: 141 VSDFGLARYV---LDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSE 197

Query: 64  GKRP 67
           GK P
Sbjct: 198 GKMP 201

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 54.1 bits (130), Expect = 2e-09
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 18/100 (18%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
              V DFGL+R++   +    +SS+G K  V ++PPE  + S+ S+  DV+++G+L+ E 
Sbjct: 138 CVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEV 194

Query: 62  FT-GKRP--------TSDIFAEGLDLHNFVKNALPEQISE 92
           ++ GK P        T +  ++GL L+       P   SE
Sbjct: 195 YSLGKMPYERFNNSETVEKVSQGLRLYR------PHLASE 228

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 52.2 bits (125), Expect = 1e-08
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TR++   +    +SS G K  V ++PPE    S+ S+  DV+S+G+L+ E FT 
Sbjct: 141 VSDFGMTRYV---LDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTE 197

Query: 64  GKRP 67
           GK P
Sbjct: 198 GKMP 201

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 50.9 bits (122), Expect = 3e-08
 Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I E +  +    I  K T     PE       ST  DV+S+GILL E
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTA----PEAASHGTFSTKSDVWSFGILLYE 196

Query: 61  TFT-GKRP 67
            FT G+ P
Sbjct: 197 MFTYGQVP 204

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 48.0 bits (114), Expect = 4e-07
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TRF+   +    +SS G K  V ++ PE    S+ S+  DV+S+G+L+ E F+ 
Sbjct: 141 VSDFGMTRFV---LDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSE 197

Query: 64  GKRP 67
           GK P
Sbjct: 198 GKTP 201

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 46.3 bits (111), Expect = 1e-06
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL+R I E     +    G K  + +  PE     + ++  DV+S+G+LL E FT 
Sbjct: 143 ISDFGLSRDIYEDDYYRKRG--GGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Query: 64  GKRPTSDIFAEGLDLHNFVKN 84
           G++P   +     ++   +++
Sbjct: 201 GEQPYPGM--SNEEVLELLED 219

Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL+R + +    +     G K  + +  PE     + ++  DV+S+G+LL E FT 
Sbjct: 143 ISDFGLSRDLYD---DDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTL 199

Query: 64  GKRPTSDIFAEGLDLHNFVKN 84
           G++P   +     ++  ++KN
Sbjct: 200 GEQPYPGM--SNEEVLEYLKN 218

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFGL + +PE          G      YAP E    S+ S+  DV+S+G+ L E FT 
Sbjct: 150 ISDFGLAKVLPEDKDYYYVKEPGESPIFWYAP-ECLRTSKFSSASDVWSFGVTLYELFTY 208

Query: 65  KRPTS 69
             P+ 
Sbjct: 209 GDPSQ 213

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL R I E I     +  G K  + +  PE  + +R S   DV+S+GILL E  T 
Sbjct: 144 VADFGLARVIKEDI---YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTY 200

Query: 64  GKRP 67
           G+ P
Sbjct: 201 GRMP 204

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 45.9 bits (107), Expect = 2e-06
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 3   AHVGDFGLTRFIPEAI--RSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG---DVYSYGIL 57
             + DFGL + +P+     S  +      GT GY  PE  +G  ++      D++S GI 
Sbjct: 141 VKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGIT 200

Query: 58  LLETFTGKRP 67
           L E  TG  P
Sbjct: 201 LYELLTGLPP 210

Length = 384

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTY-GDVYSYGILLLE 60
           + DFGL++ +     S++S    + GT  Y  PE  +G    +   D++S G++L E
Sbjct: 134 LADFGLSKLL----TSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 4   HVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE-YGMGSRVSTYGDVYSYGILLLETF 62
            + DFGL + + ++  S  +      GT  Y  PE    G+      DV+S G++L E  
Sbjct: 138 KIADFGLAKKLLKSSSSLTT----FVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELL 193

Query: 63  TGKRP 67
           TGK P
Sbjct: 194 TGKPP 198

Length = 260

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 44.1 bits (105), Expect = 7e-06
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL+R + +    +     G K  + +  PE     + ++  DV+S+G+LL E FT 
Sbjct: 144 ISDFGLSRDLYD---DDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTL 200

Query: 64  GKRPTSDIFAEGLDLHNFVKN 84
           G+ P   +     ++  ++K 
Sbjct: 201 GEEPYPGM--SNAEVLEYLKK 219

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL+R + +     + +   L   + +  PE       ++  DV+S+G+LL E FT 
Sbjct: 146 ISDFGLSRDVYDDDYYRKKTGGKLP--IRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTL 203

Query: 64  GKRPTSDIFAEGLDLHNFVKN 84
           G  P   +  E  ++  +++ 
Sbjct: 204 GATPYPGLSNE--EVLEYLRK 222

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFGL R +    +          GT  Y  PE  +G       D++S G++L E  TG
Sbjct: 138 LADFGLARQLDPGEKLT-----TFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTG 192

Query: 65  KRP 67
           K P
Sbjct: 193 KPP 195

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 6   GDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGK 65
            DFG  + + +      + S+  +GT  +  PE   G       D++S G  ++E  TGK
Sbjct: 143 ADFGCAKRLGDIETGEGTGSV--RGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200

Query: 66  RPTSDI 71
            P S++
Sbjct: 201 PPWSEL 206

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 5   VGDFGLTRFIPE-AIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           V DFGL+RF+ +       +SS+G K  + +  PE     + ++  DV+SYGI++ E  +
Sbjct: 147 VSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 206

Query: 64  -GKRPTSDI 71
            G+RP  D+
Sbjct: 207 YGERPYWDM 215

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 41.4 bits (97), Expect = 6e-05
 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 7/70 (10%)

Query: 1   MTAHVGDFGLTRFIPEA--IRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILL 58
           M   + DFGL+R I  A   +++++ +I ++    + PPE    +R +T  DV++YG++L
Sbjct: 167 MVVKIADFGLSRNIYSADYYKASENDAIPIR----WMPPESIFYNRYTTESDVWAYGVVL 222

Query: 59  LETFT-GKRP 67
            E F+ G +P
Sbjct: 223 WEIFSYGMQP 232

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.1 bits (96), Expect = 9e-05
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGT--VGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           +GDFG++R     + S     +G      + + PPE  M  + +T  DV+S+G++L E F
Sbjct: 164 IGDFGMSR----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 219

Query: 63  T-GKRP 67
           T GK+P
Sbjct: 220 TYGKQP 225

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 7/70 (10%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGT--VGYAPPEYGMGSRVSTYGDVYSYGILL 58
           +   +GDFG++R     I S     +G +    + + PPE  +  + +T  D++S+G++L
Sbjct: 159 LVVKIGDFGMSR----DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL 214

Query: 59  LETFT-GKRP 67
            E FT GK+P
Sbjct: 215 WEIFTYGKQP 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL R I +      ++  G K  + +  PE     R +   DV+S+GILL E  T 
Sbjct: 144 IADFGLARLIEDDE---YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTY 200

Query: 64  GKRP 67
           G+ P
Sbjct: 201 GRVP 204

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 8/70 (11%)

Query: 3   AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           A V DFGLT+   EA  +  +  + +K T     PE     + ST  DV+S+GILL E +
Sbjct: 141 AKVSDFGLTK---EASSTQDTGKLPVKWTA----PEALREKKFSTKSDVWSFGILLWEIY 193

Query: 63  T-GKRPTSDI 71
           + G+ P   I
Sbjct: 194 SFGRVPYPRI 203

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 3   AHVGDFGLTRFIP---EAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLL 59
           A V DFG+   +P   +A  +  + +  + GT  Y  PE   G  V+   D+Y++G++ L
Sbjct: 121 AKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFL 180

Query: 60  ETFTGKR 66
           E  TG+R
Sbjct: 181 ECLTGQR 187

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 139 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 61  TFTGKR 66
             T  R
Sbjct: 196 LTTKGR 201

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 11/68 (16%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGT----VGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +GDFG++R     + +     +G  G     + + PPE  M  + +T  DV+S+G++L E
Sbjct: 163 IGDFGMSR----DVYTTDYYRVG--GHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWE 216

Query: 61  TFT-GKRP 67
            FT GK+P
Sbjct: 217 IFTYGKQP 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 3   AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           A V DFGL R     + ++       K  V +  PE     + S+  DV+SYG+LL E F
Sbjct: 139 AKVSDFGLARVGSMGVDNS-------KLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVF 191

Query: 63  T-GKRP 67
           + G+ P
Sbjct: 192 SYGRAP 197

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 6/62 (9%)

Query: 7   DFGLTR-FIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGK 65
           DFGL +    E  R+N        GT  Y  PE  +G       D +S G+LL E  TGK
Sbjct: 136 DFGLAKELSSEGSRTNTFC-----GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK 190

Query: 66  RP 67
            P
Sbjct: 191 PP 192

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 10/64 (15%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGT-VGYAPPE---YGMGSRVSTYGDVYSYGILLLE 60
           + DFG++R   E      + S GLK   + +  PE   YG   R ++  DV+SYGILL E
Sbjct: 134 ISDFGMSR---EEEGGIYTVSDGLKQIPIKWTAPEALNYG---RYTSESDVWSYGILLWE 187

Query: 61  TFTG 64
           TF+ 
Sbjct: 188 TFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)

Query: 3   AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           A V DFGL +         Q S    K  V +  PE     + ST  DV+S+GILL E +
Sbjct: 141 AKVSDFGLAK----EASQGQDSG---KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193

Query: 63  T-GKRP 67
           + G+ P
Sbjct: 194 SFGRVP 199

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E  T 
Sbjct: 143 IADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTK 199

Query: 65  KR 66
            R
Sbjct: 200 GR 201

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   + DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 139 LVCKIADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 61  TFTGKR 66
             T  R
Sbjct: 196 LVTKGR 201

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 7/66 (10%)

Query: 5   VGDFGLTR--FIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           +GDFG++R  +  +  R    + + ++    + PPE  M  + +T  DV+S G++L E F
Sbjct: 161 IGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPESIMYRKFTTESDVWSLGVVLWEIF 216

Query: 63  T-GKRP 67
           T GK+P
Sbjct: 217 TYGKQP 222

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 8/73 (10%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE----YGMGSRVSTYGDVYSYGIL 57
              + DFG+++   +   ++Q+ S  ++G+V +  PE    Y  G   S   D++S G +
Sbjct: 146 ICKISDFGISKKSDDIYDNDQNMS--MQGSVFWMAPEVIHSYSQG--YSAKVDIWSLGCV 201

Query: 58  LLETFTGKRPTSD 70
           +LE F G+RP SD
Sbjct: 202 VLEMFAGRRPWSD 214

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 38.1 bits (89), Expect = 7e-04
 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 13/69 (18%)

Query: 3   AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE----YGMGSRVSTYGDVYSYGILL 58
            H+ DF +   +     +  +S     GT GY  PE     G    V    D +S G+  
Sbjct: 139 VHITDFNIATKVTPDTLTTSTS-----GTPGYMAPEVLCRQGYSVAV----DWWSLGVTA 189

Query: 59  LETFTGKRP 67
            E   GKRP
Sbjct: 190 YECLRGKRP 198

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGT-VGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           + DFG++R   + I     SS GLK   + +  PE     R S+  DV+SYGILL ETF+
Sbjct: 134 ISDFGMSRQEDDGI----YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 149 IGDFGLTKVLPQDKEYYKVREPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 8/67 (11%)

Query: 5   VGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           V DFGL+R +   PEA  + +   I ++ T     PE     + ++  DV+SYGI++ E 
Sbjct: 147 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA----PEAIAYRKFTSASDVWSYGIVMWEV 202

Query: 62  FT-GKRP 67
            + G+RP
Sbjct: 203 MSYGERP 209

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 9/64 (14%)

Query: 5   VGDFGLTRF--IPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLET 61
           + DFGL R   IP    SN+        T+ Y  P+  +GSR  ST  D++S G ++ E 
Sbjct: 141 LADFGLARAFGIPVNTFSNEVV------TLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEM 194

Query: 62  FTGK 65
            TG+
Sbjct: 195 ITGR 198

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 11/74 (14%)

Query: 3   AHVGDFGLTRFIPEAIRSNQSSSIGLKGT----VGYAPPEYGMGSRVSTYGDVYSYGILL 58
           A + DFGL R I      N S+ + +KG     V +  PE       +   DV+SYGILL
Sbjct: 251 AKICDFGLARDI-----MNDSNYV-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 304

Query: 59  LETFT-GKRPTSDI 71
            E F+ GK P   I
Sbjct: 305 WEIFSLGKSPYPGI 318

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGT--VGYAPPEYGMGSRVSTYGDVYSYGILLL 59
           T  +GDFG+TR I E   ++     G KG   V +  PE       +T  DV+S+G++L 
Sbjct: 157 TVKIGDFGMTRDIYE---TDYYRKGG-KGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW 212

Query: 60  ETFT 63
           E  T
Sbjct: 213 EMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 3   AHVGDFGLTRFIPEAIRSNQSSSIGLKGT----VGYAPPEYGMGSRVSTYGDVYSYGILL 58
             + DFGL R I      N S+ + +KG     V +  PE       +   DV+SYGILL
Sbjct: 180 VKICDFGLARDI-----MNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 233

Query: 59  LETFT-GKRPTSDI 71
            E F+ G  P   +
Sbjct: 234 WEIFSLGSNPYPGM 247

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 6   GDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG---DVYSYGILLLETF 62
           GDFG    +     +       L GT  Y  PE   G +   +G   D++S G ++LE  
Sbjct: 141 GDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMA 200

Query: 63  TGKRPTS 69
           TGKRP S
Sbjct: 201 TGKRPWS 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)

Query: 5   VGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           V DFGL+R +   PE   +     I ++ T     PE     + ++  DV+S+GI++ E 
Sbjct: 148 VSDFGLSRVLEDDPEGTYTTSGGKIPIRWTA----PEAIAYRKFTSASDVWSFGIVMWEV 203

Query: 62  FT-GKRPTSDI 71
            + G+RP  D+
Sbjct: 204 MSFGERPYWDM 214

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGT-VGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
              + DFG++R   + +    +S+ G+K   V +  PE     R S+  DV+S+GILL E
Sbjct: 132 VLKISDFGMSREEEDGV---YASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188

Query: 61  TFT 63
            F+
Sbjct: 189 AFS 191

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 36.0 bits (83), Expect = 0.004
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           V DFGL+R +     +  +   G K  + +  PE    ++ S   DV+++G+LL E  T
Sbjct: 145 VADFGLSRLMTGDTYTAHA---GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	163
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.91
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.9
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.88
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.88
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.87
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.86
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.86
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.86
KOG0578	550	consensus p21-activated serine/threonine protein k	99.85
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.85
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.85
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.85
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.84
PHA02988	283	hypothetical protein; Provisional	99.83
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.83
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.81
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.81
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.81
KOG0198	313	consensus MEKK and related serine/threonine protei	99.81
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.81
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.81
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.8
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.8
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.79
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.79
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.79
PTZ00284	467	protein kinase; Provisional	99.79
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.78
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.78
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.78
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.78
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.78
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.77
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.76
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.76
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.76
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.76
KOG0589	426	consensus Serine/threonine protein kinase [General	99.76
PTZ00036	440	glycogen synthase kinase; Provisional	99.76
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.76
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.76
PHA02882	294	putative serine/threonine kinase; Provisional	99.75
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.75
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.75
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.75
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.75
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.75
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.74
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.74
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.74
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.74
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.74
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.74
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.74
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.74
PTZ00283	496	serine/threonine protein kinase; Provisional	99.74
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.74
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.73
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.73
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.73
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.73
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.73
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.73
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.73
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.73
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.73
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.73
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.73
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.73
PHA03212	391	serine/threonine kinase US3; Provisional	99.73
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.72
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.72
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.72
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.72
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.72
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.72
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.72
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.72
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.72
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.72
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.72
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.72
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.72
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.72
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.72
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.71
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.71
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.71
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.71
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.71
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.71
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.71
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.71
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.71
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.71
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.71
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.71
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.71
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.7
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.7
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.7
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.7
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.7
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.7
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.7
PTZ00267	478	NIMA-related protein kinase; Provisional	99.7
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.7
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.7
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.7
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.7
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.7
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.7
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.7
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.7
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.7
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.7
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.69
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.69
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.69
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.69
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.69
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.69
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.69
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.69
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.69
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.69
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.69
PHA03207	392	serine/threonine kinase US3; Provisional	99.69
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.69
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.68
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.68
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.68
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.68
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.68
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.68
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.68
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.68
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.68
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.68
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.68
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.68
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.68
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.68
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.68
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.68
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.68
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.68
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.68
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.68
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.68
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.67
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.67
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.67
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.67
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.67
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.67
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.67
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.67
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.67
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.67
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.67
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.67
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.67
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.67
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.67
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.67
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.67
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.67
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.67
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.67
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.67
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.67
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.67
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.67
PHA03209	357	serine/threonine kinase US3; Provisional	99.67
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.67
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.67
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.67
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.67
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.67
PHA03210	501	serine/threonine kinase US3; Provisional	99.67
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.66
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.66
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.66
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.66
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.66
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.66
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.66
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.66
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.66
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.66
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.66
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.66
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.66
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.66
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.66
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.66
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.66
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.66
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.66
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.66
PHA03211	461	serine/threonine kinase US3; Provisional	99.66
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.66
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.66
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.66
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.66
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.66
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.65
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.65
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.65
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.65
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.65
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.65
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.65
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.65
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.65
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.65
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.65
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.65
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.65
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.65
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.65
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.65
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.65
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.65
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.65
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.65
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.65
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.65
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.65
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.65
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.65
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.64
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.64
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.64
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.64
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.64
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.64
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.64
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.64
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.64
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.64
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.64
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.64
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.64
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.64
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.64
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.64
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.64
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.63
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.63
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.63
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.63
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.63
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.63
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.63
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.63
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.63
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.63
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.63
KOG0584	632	consensus Serine/threonine protein kinase [General	99.63
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.63
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.63
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.63
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.62
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.62
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.62
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.62
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.62
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.62
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.62
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.62
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.62
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.62
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.62
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.62
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.62
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.62
PLN00181	793	protein SPA1-RELATED; Provisional	99.62
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.62
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.62
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.62
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.62
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.62
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.61
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.61
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.61
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.61
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.61
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.61
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.61
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.61
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.61
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.61
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.61
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.61
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.61
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.6
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.6
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.6
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.6
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.6
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.6
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.6
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.59
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.59
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.59
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.59
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.59
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.59
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.59
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.59
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.59
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.59
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.59
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.59
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.59
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.58
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.58
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.58
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.58
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.58
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.58
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.58
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.58
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.57
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.57
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.57
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.57
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.57
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.57
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.57
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.57
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.57
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.57
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.57
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.56
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.56
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.56
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.56
PLN00009	294	cyclin-dependent kinase A; Provisional	99.56
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.56
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.55
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.55
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.55
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.55
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.55
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.55
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.55
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.54
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.53
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.52
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.52
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.52
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.52
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.52
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.52
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.52
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.52
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.52
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.51
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.51
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.51
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.51
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.51
KOG3653	534	consensus Transforming growth factor beta/activin	99.5
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.5
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.5
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.49
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.49
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.48
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.48
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.48
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.48
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.48
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.48
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.48
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.46
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.46
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.45
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.45
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.45
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.44
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.43
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.43
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.4
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.39
KOG0586	596	consensus Serine/threonine protein kinase [General	99.38
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.38
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.34
KOG0605	550	consensus NDR and related serine/threonine kinases	99.32
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.32
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.3
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.28
KOG0610	459	consensus Putative serine/threonine protein kinase	99.27
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.24
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.21
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.13
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.11
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.09
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.08
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.07
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.06
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.02
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.98
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.89
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.79
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.67
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.62
KOG1152	772	consensus Signal transduction serine/threonine kin	98.52
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.32
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.28
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.27
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.12
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.93
COG4248	637	Uncharacterized protein with protein kinase and he	97.81
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.71
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.65
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.24
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.6
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.12
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	95.72
KOG1266	458	consensus Protein kinase [Signal transduction mech	95.53
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.35
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	95.03
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	92.8
PRK09188	365	serine/threonine protein kinase; Provisional	91.45
KOG1093	725	consensus Predicted protein kinase (contains TBC a	87.9
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	86.77
PF04301	213	DUF452: Protein of unknown function (DUF452); Inte	81.49

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.91  E-value=4.4e-25  Score=150.79  Aligned_cols=144  Identities=15%  Similarity=0.194  Sum_probs=104.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccc-cCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFA-EGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~-~~~~~~   79 (163)
                      .+|+||||+|+.+..+...    =+.++.|.||+|||.+.+ .+|...+|||++||++.|+++|.+.|.+..+ +....+
T Consensus       139 vvKLCDFGFAR~L~~pgd~----YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I  214 (396)
T KOG0593|consen  139 VVKLCDFGFARTLSAPGDN----YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLI  214 (396)
T ss_pred             cEEeccchhhHhhcCCcch----hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHH
Confidence            4799999999987533222    234678999999999988 5699999999999999999999999987654 333444


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....+.+..+....+...-...+-...............+.....+++|++.|++.||++|++++|++..
T Consensus       215 ~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  215 RKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             HHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            4444445556666665444444433334444444444555666688999999999999999999999864

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.90  E-value=5.5e-24  Score=152.78  Aligned_cols=127  Identities=25%  Similarity=0.369  Sum_probs=93.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC--CCCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM--GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~--~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      ++||+|||+++......    ...+...||..|||||++.  ...|+.++||||||+++||+++|+.||.+....  ...
T Consensus       182 ~~KI~DFGlsr~~~~~~----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~--~~~  255 (362)
T KOG0192|consen  182 TLKIADFGLSREKVISK----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV--QVA  255 (362)
T ss_pred             EEEECCCccceeecccc----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH--HHH
Confidence            68999999998764321    2223357999999999999  557999999999999999999999999775331  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      ..+.   ....+..+.                       ..+...+..++.+||+.||..||++.+++..|+.+.+.+..
T Consensus       256 ~~v~---~~~~Rp~~p-----------------------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  256 SAVV---VGGLRPPIP-----------------------KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             HHHH---hcCCCCCCC-----------------------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            1110   000111001                       02455678899999999999999999999999999887765


Q ss_pred             c
Q 031224          160 C  160 (163)
Q Consensus       160 ~  160 (163)
                      .
T Consensus       310 ~  310 (362)
T KOG0192|consen  310 A  310 (362)
T ss_pred             c
Confidence            4

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.88  E-value=3.8e-23  Score=149.73  Aligned_cols=124  Identities=22%  Similarity=0.369  Sum_probs=89.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++|...++.+...   ....-.+.|.|||.+..+.|+.++||||||++++|+++ |+.||.+..-  .....
T Consensus       341 ~vKIsDFGLAr~~~d~~Y~~~---~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--~ev~~  415 (468)
T KOG0197|consen  341 VVKISDFGLARLIGDDEYTAS---EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--EEVLE  415 (468)
T ss_pred             eEEEcccccccccCCCceeec---CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--HHHHH
Confidence            589999999996554322111   12234678999999999999999999999999999998 8888865311  11222


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+...+.                           ...+..|+..+-++|..||+.+|++|||++.+...|+.+.+..
T Consensus       416 ~le~GyR---------------------------lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  416 LLERGYR---------------------------LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             HHhccCc---------------------------CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence            2222111                           0111255667888999999999999999999999998887654

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=3.2e-23  Score=148.69  Aligned_cols=139  Identities=14%  Similarity=0.110  Sum_probs=96.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCc--ch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL--DL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~--~~   78 (163)
                      .+||+|||+||.+..     ...-+.++.|+||+|||++... .|+.++|+|++||+++|+.+-++.|.+..+.+.  +.
T Consensus       148 ~iKiaDFGLARev~S-----kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI  222 (538)
T KOG0661|consen  148 VIKIADFGLAREVRS-----KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI  222 (538)
T ss_pred             eeEeccccccccccc-----CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence            589999999998743     2333567899999999998665 489999999999999999999999987654221  22


Q ss_pred             HHHHHhcCchhhh--hhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQIS--EVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.+..+....+.  ..+...+....+...++....+..    .+..+.+.++.+|+.+||++||||.+.++.
T Consensus       223 c~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p----~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  223 CEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP----NASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc----ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            2222222222221  123334444445544444444443    456667889999999999999999999874

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.87  E-value=7.3e-23  Score=142.80  Aligned_cols=119  Identities=22%  Similarity=0.274  Sum_probs=87.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||||||+++.+.+.      .....+||..||+||.+.+..|+.++||||||..++|+..|+.||....+..      
T Consensus       217 eVKicDFGVS~~lvnS------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~------  284 (364)
T KOG0581|consen  217 EVKICDFGVSGILVNS------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY------  284 (364)
T ss_pred             CEEeccccccHHhhhh------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC------
Confidence            4899999999987542      3345789999999999999999999999999999999999999996541111      


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                            ..+.++++..+.+..+.....           .+..++..|+..||+.||.+|+|+.|++++
T Consensus       285 ------~~~~~Ll~~Iv~~ppP~lP~~-----------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  285 ------LDIFELLCAIVDEPPPRLPEG-----------EFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             ------CCHHHHHHHHhcCCCCCCCcc-----------cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                  122233333333222211110           234557889999999999999999999865

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=7.9e-23  Score=145.29  Aligned_cols=115  Identities=21%  Similarity=0.302  Sum_probs=85.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+|++|||++..+...    .......+||++|||||++.+..|+.++||||+|+..+||.+|.+|+.+..+...  .. 
T Consensus       149 ~vkl~DfgVa~ql~~~----~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv--lf-  221 (467)
T KOG0201|consen  149 DVKLADFGVAGQLTNT----VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV--LF-  221 (467)
T ss_pred             cEEEEecceeeeeech----hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE--EE-
Confidence            5899999999887553    2223568999999999999988899999999999999999999999987654211  00 


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                         ..+.+....++.                       .+.+.+.+|+..||+.||+.||||.++++.
T Consensus       222 ---lIpk~~PP~L~~-----------------------~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  222 ---LIPKSAPPRLDG-----------------------DFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             ---eccCCCCCcccc-----------------------ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence               111221112221                       223346778889999999999999999875

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.86  E-value=1.1e-22  Score=149.26  Aligned_cols=123  Identities=20%  Similarity=0.355  Sum_probs=91.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||-++....     ....-.++||..|||||++.+.+.++|+||||||+|+|||++|..||.+....     ..
T Consensus       250 ~VKIsDFGTS~e~~~-----~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-----AI  319 (904)
T KOG4721|consen  250 VVKISDFGTSKELSD-----KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-----AI  319 (904)
T ss_pred             eEEeccccchHhhhh-----hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-----ee
Confidence            489999999886533     23344578999999999999999999999999999999999999999764221     11


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ++++-...+.                       ..-...++..+.-|+++||+..|..||++++++..|+=..-++
T Consensus       320 IwGVGsNsL~-----------------------LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel  372 (904)
T KOG4721|consen  320 IWGVGSNSLH-----------------------LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL  372 (904)
T ss_pred             EEeccCCccc-----------------------ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence            1111111111                       1112366777888999999999999999999999987544433

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2e-21  Score=140.13  Aligned_cols=137  Identities=31%  Similarity=0.570  Sum_probs=102.2

Q ss_pred             CceeecccccccccCc-cccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcccc-ccCcch
Q 031224            1 MTAHVGDFGLTRFIPE-AIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIF-AEGLDL   78 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~-~~~~~~   78 (163)
                      |++||+|||+|+..+. .    ........||.+|++||+...+..+.++||||||++++|+++|+.+.+... .....+
T Consensus       214 ~~aKlsDFGLa~~~~~~~----~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l  289 (361)
T KOG1187|consen  214 FNAKLSDFGLAKLGPEGD----TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSL  289 (361)
T ss_pred             CCEEccCccCcccCCccc----cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccH
Confidence            6799999999976643 2    111111168999999999988889999999999999999999998876543 233446


Q ss_pred             HHHHHhcCch-hhhhhhcccccc-CCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           79 HNFVKNALPE-QISEVLDPLFVT-GGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        79 ~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ..++...... ...+.+|+.+.. ...              ....+..+..++.+|++.+|..||+|.||++.|+.+..
T Consensus       290 ~~w~~~~~~~~~~~eiiD~~l~~~~~~--------------~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  290 VEWAKPLLEEGKLREIVDPRLKEGEYP--------------DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHHHCcchhheeCCCccCCCCC--------------hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            6666544443 677777877653 211              01467778999999999999999999999999966543

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=3.3e-22  Score=145.88  Aligned_cols=117  Identities=19%  Similarity=0.257  Sum_probs=84.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|..+.....    .....+||++|||||++....|++++||||||++.+||+.|.+||.+..+    +...
T Consensus       407 ~vKltDFGFcaqi~~~~~----KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P----lrAl  478 (550)
T KOG0578|consen  407 SVKLTDFGFCAQISEEQS----KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRAL  478 (550)
T ss_pred             cEEEeeeeeeeccccccC----ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh----HHHH
Confidence            479999999998765422    34557899999999999999999999999999999999999999965221    1111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ........      +.+.+                 .......+.+|+.+||+.|+.+|++|.|||+.
T Consensus       479 yLIa~ng~------P~lk~-----------------~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  479 YLIATNGT------PKLKN-----------------PEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHhhcCC------CCcCC-----------------ccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            11010000      00000                 01223446678889999999999999999875

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=6.8e-22  Score=134.13  Aligned_cols=117  Identities=24%  Similarity=0.336  Sum_probs=81.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      ++|++|||+++.+...    .......+||++||.||.+....|+.++||||+||+++||...+.||.+.     .+...
T Consensus       166 vvKLGDfGL~r~l~s~----~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L  236 (375)
T KOG0591|consen  166 VVKLGDFGLGRFLSSK----TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSL  236 (375)
T ss_pred             ceeeccchhHhHhcch----hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHH
Confidence            5899999999988654    22334578999999999999999999999999999999999999999763     11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      ..+-....+..+-                   . .   -....+..|+..|+..||+.||+...++..+
T Consensus       237 ~~KI~qgd~~~~p-------------------~-~---~YS~~l~~li~~ci~vd~~~RP~t~~~v~di  282 (375)
T KOG0591|consen  237 CKKIEQGDYPPLP-------------------D-E---HYSTDLRELINMCIAVDPEQRPDTVPYVQDI  282 (375)
T ss_pred             HHHHHcCCCCCCc-------------------H-H---HhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence            1111011110000                   0 1   1233456678889999999999954444443

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=3.6e-22  Score=138.94  Aligned_cols=140  Identities=18%  Similarity=0.185  Sum_probs=88.9

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccc-cCcchHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFA-EGLDLHN   80 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~-~~~~~~~   80 (163)
                      +||+|||+|+.....  ......+.++-|.||+|||++... .|+...||||.||++.|+++|++.|.+... ....++.
T Consensus       164 lKI~DFGLAR~~~~~--~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~  241 (359)
T KOG0660|consen  164 LKICDFGLARYLDKF--FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLIL  241 (359)
T ss_pred             EEeccccceeecccc--CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence            599999999987543  223344667889999999998765 499999999999999999999999977533 2222222


Q ss_pred             HHHhcCchhhhhhhc-----cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLD-----PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...+...+.....+.     +.+...+.. ...+.    ....+......++|+.++|..||.+|+|++|.+..
T Consensus       242 ~~lGtP~~e~l~~i~s~~ar~yi~slp~~-p~~~f----~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  242 ELLGTPSEEDLQKIRSEKARPYIKSLPQI-PKQPF----SSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             HhcCCCCHHHHHHhccHHHHHHHHhCCCC-CCCCH----HHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            222211111111111     111111111 11111    11122444567899999999999999999998764

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=1.1e-21  Score=144.22  Aligned_cols=115  Identities=21%  Similarity=0.257  Sum_probs=82.9

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      |++||+|||+|..+..+    .....+.|||+-|.|||++.....+..+||||+||++|.++.|++||+...     +..
T Consensus       155 ~~VKIgDFGLAt~le~~----~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-----vke  225 (592)
T KOG0575|consen  155 MNVKIGDFGLATQLEYD----GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-----VKE  225 (592)
T ss_pred             CcEEecccceeeeecCc----ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----HHH
Confidence            68999999999887532    233456799999999999998889999999999999999999999997631     111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....            .-.+...             .+........+|+...|+.||.+|||+++|+..
T Consensus       226 ty~~------------Ik~~~Y~-------------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  226 TYNK------------IKLNEYS-------------MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             HHHH------------HHhcCcc-------------cccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            1110            0000000             000122335678889999999999999999863

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=5.8e-22  Score=140.15  Aligned_cols=117  Identities=22%  Similarity=0.278  Sum_probs=83.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC---CccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR---VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~---~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+|+..+.     .....+.|||+.|.|||++.+..   +..++|+||+||+++-+++|.+||.+...+.. +
T Consensus       317 llKItDFGlAK~~g~-----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-l  390 (475)
T KOG0615|consen  317 LLKITDFGLAKVSGE-----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-L  390 (475)
T ss_pred             EEEecccchhhcccc-----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-H
Confidence            479999999998754     23334579999999999997754   34578999999999999999999987654431 2


Q ss_pred             HHHHHh-cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKN-ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+-+.. .+.-  ...                       ....-..+.++|+.++|..||+.|||+.|+++.
T Consensus       391 ~eQI~~G~y~f--~p~-----------------------~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  391 KEQILKGRYAF--GPL-----------------------QWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             HHHHhcCcccc--cCh-----------------------hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            222221 1110  000                       011223456889999999999999999999864

>PHA02988 hypothetical protein; Provisional

Probab=99.83  E-value=6.4e-21  Score=134.11  Aligned_cols=119  Identities=22%  Similarity=0.279  Sum_probs=83.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC--CCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG--SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~--~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++.+...       .....|+..|+|||.+.+  ..++.++|||||||+++|+++|+.||.+....  ...
T Consensus       161 ~~kl~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--~~~  231 (283)
T PHA02988        161 KLKIICHGLEKILSSP-------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--EIY  231 (283)
T ss_pred             cEEEcccchHhhhccc-------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--HHH
Confidence            4799999998865321       112457889999999865  56899999999999999999999999653211  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ..+...   ...    .    ..+               ..+...+.+++.+||+.||++|||+.++++.|+.++.
T Consensus       232 ~~i~~~---~~~----~----~~~---------------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        232 DLIINK---NNS----L----KLP---------------LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHHhc---CCC----C----CCC---------------CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            111000   000    0    000               0123456789999999999999999999999998764

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.83  E-value=2.7e-21  Score=146.71  Aligned_cols=124  Identities=21%  Similarity=0.383  Sum_probs=90.2

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~   79 (163)
                      |.|||+|||++|-.=...+..  ...+-.-.+.||+||.+..++|+.++||||||+++||+++ |+.||++....  ..+
T Consensus       640 l~VKIsDfGLsRdiYssDYYk--~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--EVI  715 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYSSDYYK--VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--EVI  715 (774)
T ss_pred             eEEEecccccchhhhhhhhhc--ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--HHH
Confidence            579999999998642221211  1112234678999999999999999999999999999997 99999775222  122


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      +.+..           ..+..                ...+++..+-+||.+||+.+|.+||+++||-..|++..+
T Consensus       716 e~i~~-----------g~lL~----------------~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  716 ECIRA-----------GQLLS----------------CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             HHHHc-----------CCccc----------------CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            22211           11111                122667788999999999999999999999999988754

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.81  E-value=1.8e-20  Score=138.85  Aligned_cols=141  Identities=21%  Similarity=0.222  Sum_probs=89.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccc-cCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFA-EGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~-~~~~~~~   80 (163)
                      .+||+|||.|......       ...++-+++|+|||++.+.+|+.+.|+||||||+.||.+|.+.|.+... +....+.
T Consensus       329 ~vKVIDFGSSc~~~q~-------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~  401 (586)
T KOG0667|consen  329 RIKVIDFGSSCFESQR-------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARII  401 (586)
T ss_pred             ceeEEecccccccCCc-------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHH
Confidence            5899999999876432       2245678999999999999999999999999999999999988876543 2222222


Q ss_pred             HHHhcCchhh-------hhhhcc-------ccccC-----------------CCCCCCc-hhhhhhhHhhHHHHHHHHHH
Q 031224           81 FVKNALPEQI-------SEVLDP-------LFVTG-----------------GEEGEGT-AEEKLKQDQVQESLATILKI  128 (163)
Q Consensus        81 ~~~~~~~~~~-------~~~~~~-------~~~~~-----------------~~~~~~~-~~~~~~~~~~~~~~~~~~~l  128 (163)
                      .+.+..+..+       ..+++.       .....                 ......+ ....+........-..++++
T Consensus       402 e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~df  481 (586)
T KOG0667|consen  402 EVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDF  481 (586)
T ss_pred             HHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHH
Confidence            2222111111       111111       00000                 0000011 11111111222445678999


Q ss_pred             HhhcCCCCcCCCCCHHHHHHH
Q 031224          129 GVACSVESPRERMDISDVVNN  149 (163)
Q Consensus       129 ~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +++||.+||.+|+|+.+++++
T Consensus       482 lk~~L~~dP~~R~tp~qal~H  502 (586)
T KOG0667|consen  482 LKRCLEWDPAERITPAQALNH  502 (586)
T ss_pred             HHHHhccCchhcCCHHHHhcC
Confidence            999999999999999998864

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.81  E-value=7.1e-20  Score=120.23  Aligned_cols=125  Identities=15%  Similarity=0.196  Sum_probs=81.4

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFV   82 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~   82 (163)
                      +|+  ||+++.....         ...|+..|+|||++.+..++.++|||||||+++|+++|+.||..............
T Consensus        50 ~~~--fG~~~~~~~~---------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~  118 (176)
T smart00750       50 LKL--DGSVAFKTPE---------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILL  118 (176)
T ss_pred             eee--ccceEeeccc---------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHH
Confidence            455  8887764321         12578999999999888899999999999999999999999865322111111111


Q ss_pred             HhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           83 KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      ...         .+   .......       ..... .....+.+++.+||+.+|.+|||+.++++.+..+..+..
T Consensus       119 ~~~---------~~---~~~~~~~-------~~~~~-~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~~  174 (176)
T smart00750      119 NGM---------PA---DDPRDRS-------NLESV-SAARSFADFMRVCASRLPQRREAANHYLAHCRALFAETL  174 (176)
T ss_pred             HHh---------cc---CCccccc-------cHHHH-HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHHh
Confidence            100         00   0000000       00000 111257889999999999999999999999888776543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=2.4e-20  Score=134.90  Aligned_cols=142  Identities=20%  Similarity=0.185  Sum_probs=91.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCcccccc-CcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAE-GLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~-~~~~~   79 (163)
                      ++||+|||+|+++....   ...-+..+-|.||++||.+.+.. |+..+|+||.|||+.||+.|++.|.+..+. ....+
T Consensus       256 ~LKiaDFGLAr~y~~~~---~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI  332 (560)
T KOG0600|consen  256 VLKIADFGLARFYTPSG---SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI  332 (560)
T ss_pred             CEEeccccceeeccCCC---CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH
Confidence            47999999999875432   22234566799999999999875 999999999999999999999999876442 22222


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..+.+...+.... ... +.....-.......+...+.........++|+...|..||++|.||.++++
T Consensus       333 fklcGSP~e~~W~-~~k-LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  333 FKLCGSPTEDYWP-VSK-LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HHHhCCCChhccc-ccc-CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            2222222222211 000 110000011112222222334455566788999999999999999998875

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.81  E-value=8.8e-21  Score=133.11  Aligned_cols=121  Identities=21%  Similarity=0.353  Sum_probs=79.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++..... ...........||+.|||||++..+. ...++||||+||++.||++|+.||.... .......
T Consensus       156 ~~KlaDFG~a~~~~~~-~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~-~~~~~~~  233 (313)
T KOG0198|consen  156 DVKLADFGLAKKLESK-GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF-EEAEALL  233 (313)
T ss_pred             eEEeccCccccccccc-cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc-chHHHHH
Confidence            5799999999876531 11122233467999999999998543 3358999999999999999999997630 1001111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .+  .....     .|.+..                   .......+|+..|+..||.+||||+++++.-
T Consensus       234 ~i--g~~~~-----~P~ip~-------------------~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  234 LI--GREDS-----LPEIPD-------------------SLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             HH--hccCC-----CCCCCc-------------------ccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence            11  00000     001110                   1223456788899999999999999998864

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.81  E-value=1.8e-20  Score=146.56  Aligned_cols=128  Identities=21%  Similarity=0.300  Sum_probs=89.3

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~   79 (163)
                      +.+||+|||+|+-+-........  ....-...|||||.+....|+.++||||||+++||+++ |..||.+....  ...
T Consensus       839 r~VKIaDFGlArDiy~~~yyr~~--~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--~v~  914 (1025)
T KOG1095|consen  839 RVVKIADFGLARDIYDKDYYRKH--GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--EVL  914 (1025)
T ss_pred             CcEEEcccchhHhhhhchheecc--CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH--HHH
Confidence            46899999999943222111111  11123568999999998899999999999999999998 88999663211  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      ..+...  .++                         ...+.|...+.++|..||+.+|++||++..+++.+..+...+..
T Consensus       915 ~~~~~g--gRL-------------------------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  915 LDVLEG--GRL-------------------------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG  967 (1025)
T ss_pred             HHHHhC--Ccc-------------------------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence            111100  011                         01125566678999999999999999999999999888776543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.81  E-value=1.8e-20  Score=126.12  Aligned_cols=140  Identities=19%  Similarity=0.188  Sum_probs=87.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccC-cchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~~~   79 (163)
                      .+||+|||+++.+......    ..+.+-|.||+|||.+.+.. |+..+|+||.||++.|++.|.+.|.+..+-+ ...+
T Consensus       139 ~lKiADFGLAr~f~~p~~~----~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~I  214 (318)
T KOG0659|consen  139 QLKIADFGLARFFGSPNRI----QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKI  214 (318)
T ss_pred             cEEeecccchhccCCCCcc----cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHH
Confidence            3699999999998654222    22336799999999998876 9999999999999999999988886643311 1111


Q ss_pred             H-HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 N-FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      - ....+.++.+.++..=   .+..+....+.+.+. ..++.+....++|+..+|.+||.+|.|++|++++
T Consensus       215 f~~LGTP~~~~WP~~~~l---pdY~~~~~~P~~~~~-~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  215 FRALGTPTPDQWPEMTSL---PDYVKIQQFPKPPLN-NLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             HHHcCCCCcccCcccccc---ccHHHHhcCCCCccc-cccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence            1 1111112222221110   000000000001111 1334556667999999999999999999998864

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.80  E-value=5.4e-20  Score=132.30  Aligned_cols=125  Identities=25%  Similarity=0.363  Sum_probs=84.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||++.+..++.++||||||++++|+++ |..||.+..... ....
T Consensus       212 ~~kl~DfG~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~  288 (338)
T cd05102         212 VVKICDFGLARDIYKDPDY--VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQ  288 (338)
T ss_pred             cEEEeecccccccccCcch--hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHH
Confidence            4799999999865332111  11112235678999999988889999999999999999997 999986532111 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.           +.... ..+               ......+.+++.+||+.||++|||+.++++.|+.+..+
T Consensus       289 ~~~-----------~~~~~-~~~---------------~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         289 RLK-----------DGTRM-RAP---------------ENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE  337 (338)
T ss_pred             HHh-----------cCCCC-CCC---------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            100           00000 000               01223467899999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=5.1e-20  Score=131.57  Aligned_cols=128  Identities=20%  Similarity=0.275  Sum_probs=84.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC--CCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS--RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~--~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||++-.+..+...........+|+++|||||++...  .|+.|+|||||||..+|+.+|..||....+..    
T Consensus       164 ~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk----  239 (516)
T KOG0582|consen  164 TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK----  239 (516)
T ss_pred             cEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH----
Confidence            479999999877654432222222567899999999995443  49999999999999999999999996542221    


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                       .+...+........               ...+...........+.+++..||+.||++|||++++++.
T Consensus       240 -vLl~tLqn~pp~~~---------------t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  240 -VLLLTLQNDPPTLL---------------TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             -HHHHHhcCCCCCcc---------------cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence             11111111110000               1111122233444577888999999999999999999864

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.1e-19  Score=135.16  Aligned_cols=121  Identities=23%  Similarity=0.365  Sum_probs=88.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++++..+.+..+.   ...-.+.|.|||.+..+.++.++|||+||+++||+.+ |-.||.+..     +.+
T Consensus       403 iVKvADFGLsRlMtgDTYTAHA---GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSq  474 (1157)
T KOG4278|consen  403 IVKVADFGLSRLMTGDTYTAHA---GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQ  474 (1157)
T ss_pred             eEEeeccchhhhhcCCceeccc---CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHH
Confidence            4799999999998765332221   1122567999999999999999999999999999987 888987642     221


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      ..         .++..-..-+               ....|...+.+||+.||+++|.+||++.|+.+.|+.+.
T Consensus       475 VY---------~LLEkgyRM~---------------~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  475 VY---------GLLEKGYRMD---------------GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             HH---------HHHhcccccc---------------CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence            11         1111111111               11266777889999999999999999999999988754

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.79  E-value=6.5e-20  Score=127.99  Aligned_cols=140  Identities=16%  Similarity=0.112  Sum_probs=88.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccc-cCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFA-EGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~-~~~~~~   79 (163)
                      .+||||||.|+.+..+.     ....+.-+++|+|||.+.+.. |+.+.||||.||++.||+.|++.|.+... +...++
T Consensus       164 ~LKicDFGSAK~L~~~e-----pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eI  238 (364)
T KOG0658|consen  164 VLKICDFGSAKVLVKGE-----PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEI  238 (364)
T ss_pred             eEEeccCCcceeeccCC-----CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHH
Confidence            57999999999886542     223455689999999998876 99999999999999999999999987433 222222


Q ss_pred             HHHHhcCch-hhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPE-QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+.+.... ..............+......-.+   ........+.++|+.+++.++|.+|.++.|++..
T Consensus       239 ik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~---~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  239 IKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHK---VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             HHHhCCCCHHHHhhcCcccccccCccccccccee---ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            222222111 222211111111111111111001   1112334457889999999999999999999764

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=4.1e-20  Score=135.13  Aligned_cols=120  Identities=23%  Similarity=0.367  Sum_probs=81.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-----------CCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-----------RVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-----------~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||.|||+|..+..+.++-  .....+||.-||+||.+...           +.+.++||||+||++|+|+.|++||..
T Consensus       497 ~LKLIDFGIA~aI~~DTTsI--~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~  574 (677)
T KOG0596|consen  497 RLKLIDFGIANAIQPDTTSI--VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ  574 (677)
T ss_pred             eEEeeeechhcccCccccce--eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence            36999999999887654432  33457899999999976432           256889999999999999999999954


Q ss_pred             ccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           71 IFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .       +..+     ..+....++...-.++..              .....++++|+.||..||.+|||+.+||+.
T Consensus       575 ~-------~n~~-----aKl~aI~~P~~~Iefp~~--------------~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  575 I-------INQI-----AKLHAITDPNHEIEFPDI--------------PENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             H-------HHHH-----HHHHhhcCCCccccccCC--------------CCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            2       1111     112222222111011100              001127899999999999999999999864

>PTZ00284 protein kinase; Provisional

Probab=99.79  E-value=1.2e-19  Score=135.77  Aligned_cols=63  Identities=24%  Similarity=0.264  Sum_probs=52.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||.+.....       .....+||..|+|||++.+..++.++|||||||+++|+++|+.||...
T Consensus       286 ~vkl~DfG~~~~~~~-------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~  348 (467)
T PTZ00284        286 RVRICDLGGCCDERH-------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH  348 (467)
T ss_pred             eEEECCCCccccCcc-------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            489999998764321       122357899999999998888999999999999999999999999653

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.78  E-value=3.4e-19  Score=125.32  Aligned_cols=144  Identities=17%  Similarity=0.129  Sum_probs=82.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCc-chHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL-DLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~-~~~~   80 (163)
                      .+||+|||+++.......   .......|+..|+|||++.+..++.++|+||+||+++++++|+.||........ ....
T Consensus       138 ~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~  214 (287)
T cd07848         138 VLKLCDFGFARNLSEGSN---ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQ  214 (287)
T ss_pred             cEEEeeccCccccccccc---ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            479999999987643211   111234688899999999888889999999999999999999999975322110 0011


Q ss_pred             HHHhcCchhhhhhhccccc-cCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFV-TGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ......+......+..... .........................+.+|+.+||+.||++|||++++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         215 KVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            1111111111111000000 0000000000000001111123445789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.78  E-value=3.6e-19  Score=124.90  Aligned_cols=121  Identities=23%  Similarity=0.380  Sum_probs=82.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|+|||.+.+..++.++|+|||||+++|+++ |..||.+....  ....
T Consensus       162 ~~~L~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~  237 (283)
T cd05048         162 TVKISDFGLSRDIYSADY--YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIE  237 (283)
T ss_pred             cEEECCCcceeecccccc--ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            478999999876532211  111122345778999999888889999999999999999998 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+..           ......                .......+.+|+.+||+.||++|||+.+|++.|+++
T Consensus       238 ~i~~-----------~~~~~~----------------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         238 MIRS-----------RQLLPC----------------PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHHc-----------CCcCCC----------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            1100           000000                013345578899999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.78  E-value=1.6e-19  Score=125.17  Aligned_cols=143  Identities=20%  Similarity=0.131  Sum_probs=84.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccc-cCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFA-EGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~-~~~~~~   79 (163)
                      .+||+|||+||.++..    .+.-+..+-|.||+|||.+.+.. |+..+|+||+|||+.|++.+++.|.+... +....+
T Consensus       215 ~lKiaDFGLAR~ygsp----~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~I  290 (419)
T KOG0663|consen  215 ILKIADFGLAREYGSP----LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKI  290 (419)
T ss_pred             cEEecccchhhhhcCC----cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHH
Confidence            3699999999998654    23334456799999999999876 99999999999999999999999876543 111111


Q ss_pred             HHHHhcCchhhhh-hhccccccCCCCCCCchhhhhhhHhh-HHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISE-VLDPLFVTGGEEGEGTAEEKLKQDQV-QESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      -...+.-.+.... +...-..+.. .....+...+...+. ........+|+...+.+||.+|.||+|.++.
T Consensus       291 f~llGtPte~iwpg~~~lp~~k~~-~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  291 FKLLGTPSEAIWPGYSELPAVKKM-TFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             HHHhCCCccccCCCccccchhhcc-ccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence            1111111111111 0000000000 000000001111100 0022445778889999999999999998753

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.78  E-value=3.9e-19  Score=132.35  Aligned_cols=113  Identities=19%  Similarity=0.263  Sum_probs=83.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCc-cccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVS-TYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~-~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      ++||+|||+|....+     .....+.||++-|.|||++.+.+|. .++||||+|+|++.+++|+.||++.     .+..
T Consensus       150 nIKIADFGMAsLe~~-----gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~  219 (786)
T KOG0588|consen  150 NIKIADFGMASLEVP-----GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRV  219 (786)
T ss_pred             CEeeeccceeecccC-----CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHH
Confidence            479999999987644     3344567899999999999998874 7789999999999999999999642     2333


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.++..+.+.          +++               +-..++.+|+.+++..||.+|.|++||+++
T Consensus       220 LLlKV~~G~f~----------MPs---------------~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  220 LLLKVQRGVFE----------MPS---------------NISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             HHHHHHcCccc----------CCC---------------cCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            33322222111          010               223346788999999999999999999875

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.78  E-value=3.3e-19  Score=136.64  Aligned_cols=125  Identities=28%  Similarity=0.370  Sum_probs=85.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++................ -...|||||.+....|+.++||||||++++|+++ |..||.+... ...+..
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~~l~~  533 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TEELLE  533 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HHHHHH
Confidence            579999999996544322111111101 2456999999998889999999999999999998 8899976321 111122


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ++......                           ..+..+..++-.+|+.||+.+|++||++.++.+.|+....
T Consensus       534 ~l~~G~r~---------------------------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  534 FLKEGNRM---------------------------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             HHhcCCCC---------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            22221110                           0111345567799999999999999999999999998543

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.77  E-value=3.1e-19  Score=131.60  Aligned_cols=128  Identities=20%  Similarity=0.287  Sum_probs=86.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      +|||+|||++..-..-  ..........|...|||||++..   .+|+..+|||||||++|||++|..||.....+...+
T Consensus       526 kVkIgDFGLatvk~~w--~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIif  603 (678)
T KOG0193|consen  526 KVKIGDFGLATVKTRW--SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIF  603 (678)
T ss_pred             cEEEecccceeeeeee--ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEE
Confidence            6899999998653210  11111122347789999998854   458999999999999999999999997322221111


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                        .+.+.+   +.    +..                ..-..++.+++.+|+..||..++++||.+.+|+..|..+..+
T Consensus       604 --mVGrG~---l~----pd~----------------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  604 --MVGRGY---LM----PDL----------------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             --Eecccc---cC----ccc----------------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence              111110   00    000                011126677888999999999999999999999998888764

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.76  E-value=9.8e-19  Score=122.81  Aligned_cols=137  Identities=16%  Similarity=0.168  Sum_probs=84.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......... .......++..|++||.+....++.++|+||||++++++++|..|+.............
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~  223 (283)
T cd05080         145 LVKIGDFGLAKAVPEGHEYY-RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGP  223 (283)
T ss_pred             cEEEeecccccccCCcchhh-ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcc
Confidence            47899999998764321110 11112235667999999888788999999999999999999999985432111000000


Q ss_pred             HHhc-CchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           82 VKNA-LPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .... ........++.......               .......+.+++.+||+.+|++|||++++++.|+.+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         224 KQGQMTVVRLIELLERGMRLPC---------------PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             cccccchhhhhhhhhcCCCCCC---------------CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            0000 00011111111100000               0022345788999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.76  E-value=7.9e-20  Score=138.14  Aligned_cols=125  Identities=22%  Similarity=0.448  Sum_probs=89.4

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~   79 (163)
                      +.+||+|||++|.+.++..... ......-.+.|.|||.+...+++.++|+||||+++||+++ |..||.+....  +.+
T Consensus       768 LvCKVsDFGLSRvledd~~~~y-tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ--dVI  844 (996)
T KOG0196|consen  768 LVCKVSDFGLSRVLEDDPEAAY-TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVI  844 (996)
T ss_pred             eEEEeccccceeecccCCCccc-cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH--HHH
Confidence            4689999999998755421111 1111222568999999999999999999999999999886 99999664221  112


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ..+...+  +++                         -.-+|+..+..||+.||+.|-+.||++.||+..|+++..
T Consensus       845 kaIe~gy--RLP-------------------------pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  845 KAIEQGY--RLP-------------------------PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             HHHHhcc--CCC-------------------------CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            2121111  111                         011677888999999999999999999999999999864

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.76  E-value=9.3e-19  Score=127.61  Aligned_cols=123  Identities=28%  Similarity=0.364  Sum_probs=81.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||++.+..++.++|+|||||+++++++ |+.||....... ....
T Consensus       250 ~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~  326 (374)
T cd05106         250 VAKICDFGLARDIMNDSNY--VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYK  326 (374)
T ss_pred             eEEEeeceeeeeccCCcce--eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHH
Confidence            4799999999865432111  11112234567999999888889999999999999999997 999996532211 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      ......            ....+.               .....+.+++.+||+.||++|||+.++++.|+++.
T Consensus       327 ~~~~~~------------~~~~~~---------------~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         327 MVKRGY------------QMSRPD---------------FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHHccc------------CccCCC---------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            111000            000000               01234678999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.76  E-value=1.2e-18  Score=125.44  Aligned_cols=124  Identities=22%  Similarity=0.315  Sum_probs=83.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......  .......++..|+|||++.+..++.++|+|||||+++++++ |..||.+....+ .+..
T Consensus       211 ~vkL~DfG~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~  287 (337)
T cd05054         211 VVKICDFGLARDIYKDPDY--VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCR  287 (337)
T ss_pred             cEEEeccccchhcccCcch--hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHH
Confidence            4789999999876432111  11122345678999999988889999999999999999997 999986532111 0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+            ........+               ......+.+++.+||+.+|++||++.++++.|+.+..
T Consensus       288 ~~------------~~~~~~~~~---------------~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         288 RL------------KEGTRMRAP---------------EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HH------------hccCCCCCC---------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            11            000000000               0112346788999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.76  E-value=5.1e-19  Score=127.77  Aligned_cols=114  Identities=19%  Similarity=0.186  Sum_probs=84.7

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFV   82 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~   82 (163)
                      +||+|||+|+.+....    ......+||+.|++||++.+.+|+.++||||+||+++|+.+-+.+|....  ...++..+
T Consensus       145 VkLgDfGlaK~l~~~~----~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~--m~~Li~ki  218 (426)
T KOG0589|consen  145 VKLGDFGLAKILNPED----SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN--MSELILKI  218 (426)
T ss_pred             eeecchhhhhhcCCch----hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc--hHHHHHHH
Confidence            6999999999986542    23345789999999999999999999999999999999999999996532  11222222


Q ss_pred             HhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           83 KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...   .    .++     .+               ......+..++..|++.+|..||++.+++..
T Consensus       219 ~~~---~----~~P-----lp---------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  219 NRG---L----YSP-----LP---------------SMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             hhc---c----CCC-----CC---------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            111   0    111     00               1234456778899999999999999999987

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.76  E-value=6.8e-19  Score=130.74  Aligned_cols=138  Identities=17%  Similarity=0.225  Sum_probs=81.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+....     ......|++.|+|||++.+. .++.++|+||+||+++++++|..||.+..... .+..
T Consensus       209 ~vkL~DFGla~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~  282 (440)
T PTZ00036        209 TLKLCDFGSAKNLLAGQ-----RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVR  282 (440)
T ss_pred             ceeeeccccchhccCCC-----CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHH
Confidence            47999999998764321     11234678999999988664 58899999999999999999999996532211 1111


Q ss_pred             HHH---hcCchhhhhhhcccccc-CCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVK---NALPEQISEVLDPLFVT-GGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.   ....+.+. ..++.... ..+.   .....+...........+.+|+.+||..||.+|||+.|+++.
T Consensus       283 i~~~~~~p~~~~~~-~~~~~~~~~~~~~---~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        283 IIQVLGTPTEDQLK-EMNPNYADIKFPD---VKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HHHHhCCCCHHHHH-HhchhhhcccCCc---cCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            111   00011111 11111000 0000   000001111111123457889999999999999999999854

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.76  E-value=5.1e-19  Score=118.37  Aligned_cols=116  Identities=20%  Similarity=0.258  Sum_probs=81.9

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFV   82 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~   82 (163)
                      +|++|||++..+..     ........|++.|++||+++..+|+..+|||+.|++++-++.|..||.+..  ...+-+-+
T Consensus       152 vKL~~FGvAi~l~~-----g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I  224 (355)
T KOG0033|consen  152 VKLADFGLAIEVND-----GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQI  224 (355)
T ss_pred             eeecccceEEEeCC-----ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHH
Confidence            79999999988753     334456789999999999999999999999999999999999999997631  11111111


Q ss_pred             HhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           83 KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...           ....+.+.+             +.-.+...+|+++||..||.+|.|+.|.++.
T Consensus       225 ~~g-----------~yd~~~~~w-------------~~is~~Ak~LvrrML~~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  225 KAG-----------AYDYPSPEW-------------DTVTPEAKSLIRRMLTVNPKKRITADEALKH  267 (355)
T ss_pred             hcc-----------ccCCCCccc-------------CcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence            111           000011000             0112334678889999999999999998753

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.76  E-value=2.6e-18  Score=121.22  Aligned_cols=124  Identities=22%  Similarity=0.374  Sum_probs=84.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||+++.......  ........++..|++||++.+..++.++|+||||++++++++ |+.||.......  ...
T Consensus       161 ~~~l~dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~  236 (291)
T cd05094         161 LVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIE  236 (291)
T ss_pred             cEEECCCCcccccCCCce--eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH
Confidence            478999999876533211  111223346778999999888888999999999999999998 999985532110  111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      ...           ....... .               ......+.+++.+||+.||++|||+.+|++.|.++.+.
T Consensus       237 ~~~-----------~~~~~~~-~---------------~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         237 CIT-----------QGRVLER-P---------------RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             HHh-----------CCCCCCC-C---------------ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            100           0000000 0               01234467899999999999999999999999999775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.75  E-value=1.1e-18  Score=123.40  Aligned_cols=127  Identities=18%  Similarity=0.168  Sum_probs=83.2

Q ss_pred             ceeecccccccccCccccC---CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .++|+|||+++.+..+...   .........||+.|++||+..+..++.++|+||+||+++++++|+.||....... ..
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~  242 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NL  242 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HH
Confidence            4789999999876432111   0111122468999999999888889999999999999999999999997642211 11


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .......+   ......+...                  .......+.+++..||+.+|++||++.++.+.|
T Consensus       243 ~~~~~~~~---~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        243 IHAAKCDF---IKRLHEGKIK------------------IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHhHHHH---HHHhhhhhhc------------------cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            11111100   0111111100                  002234577899999999999999999999876

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.75  E-value=1.2e-18  Score=129.47  Aligned_cols=122  Identities=20%  Similarity=0.318  Sum_probs=89.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||++|.+..... +...  ...-.+.||+||.+....++.++|+|-||+.+||++. |..||.+....+.... 
T Consensus       529 CVKLaDFGLSR~~ed~~y-YkaS--~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~-  604 (974)
T KOG4257|consen  529 CVKLADFGLSRYLEDDAY-YKAS--RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH-  604 (974)
T ss_pred             eeeecccchhhhccccch-hhcc--ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE-
Confidence            379999999999865422 2221  2334678999999988889999999999999999886 9999976432221111 


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                       +...    -+                       .+-.+.|+..+-.||.+||.++|.+||.+.++...|+.++.
T Consensus       605 -iEnG----eR-----------------------lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  605 -IENG----ER-----------------------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             -ecCC----CC-----------------------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence             0000    00                       00112566677889999999999999999999999999887

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.75  E-value=3.8e-19  Score=127.73  Aligned_cols=138  Identities=19%  Similarity=0.189  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC--CCCccccceehhhHHHHHHHhCCCCCccccccC-cch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG--SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~--~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~~   78 (163)
                      .+||+|||+++........ ........|+..|+|||++.+  ..++.++|+|||||+++++++|+.||.+..... ...
T Consensus       141 ~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~  219 (338)
T cd07859         141 KLKICDFGLARVAFNDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDL  219 (338)
T ss_pred             cEEEccCccccccccccCc-cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Confidence            4799999999865322111 111233568999999998765  468899999999999999999999996532110 000


Q ss_pred             HHHHHh-cCchh--------hhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKN-ALPEQ--------ISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...... .....        ....+..... ..+    ..    ...........+.+++.+||+.||++|||++++++.
T Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~----~~----~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         220 ITDLLGTPSPETISRVRNEKARRYLSSMRK-KQP----VP----FSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HHHHhCCCCHHHHHHhhhhhHHHHHHhhcc-cCC----Cc----hHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            000000 00000        0000100000 000    00    000011123446789999999999999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.75  E-value=4.8e-18  Score=119.21  Aligned_cols=123  Identities=15%  Similarity=0.271  Sum_probs=82.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|++||.+.+..++.++|+||||++++|+++ |..||.+....  ....
T Consensus       147 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~  222 (279)
T cd05111         147 IVQIADFGVADLLYPDDK--KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPD  222 (279)
T ss_pred             cEEEcCCccceeccCCCc--ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            479999999987643211  111122346678999999988889999999999999999998 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+...            .....+.               .+...+..++.+||..||++|||+.++++.|..+..
T Consensus       223 ~~~~~------------~~~~~~~---------------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         223 LLEKG------------ERLAQPQ---------------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             HHHCC------------CcCCCCC---------------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            11100            0000000               112235678899999999999999999999887654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.75  E-value=1.6e-18  Score=120.27  Aligned_cols=125  Identities=24%  Similarity=0.335  Sum_probs=80.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhC-CCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG-KRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g-~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.................++..|+|||.+.+..++.++|+||||++++|+++| ..||.....  .....
T Consensus       136 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~  213 (262)
T cd05058         136 TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITV  213 (262)
T ss_pred             cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Confidence            478999999876533211111111123356689999998887889999999999999999995 555643211  01111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+.           ..... ..+               ......+.+++.+||+.+|++||++.++++.|+++..
T Consensus       214 ~~~-----------~~~~~-~~~---------------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         214 YLL-----------QGRRL-LQP---------------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHh-----------cCCCC-CCC---------------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            110           00000 000               0112346789999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.75  E-value=1.7e-18  Score=121.96  Aligned_cols=136  Identities=18%  Similarity=0.157  Sum_probs=80.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     .......|+..|+|||.+.+..++.++|+|||||+++++++|+.||.+....+ .+...
T Consensus       148 ~~kl~Dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i  221 (290)
T cd07862         148 QIKLADFGLARIYSFQ-----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKI  221 (290)
T ss_pred             CEEEccccceEeccCC-----cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHH
Confidence            4799999999865432     11223468899999999988888999999999999999999999997542211 11111


Q ss_pred             HHh---cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKN---ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...   ..+..+..... ...........    .............+.+++.+||+.||++|||+.++++
T Consensus       222 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         222 LDVIGLPGEEDWPRDVA-LPRQAFHSKSA----QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HHHhCCCChhhchhhhc-ccchhccCCCC----CCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            100   00111100000 00000000000    0000111122344678999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.74  E-value=2.1e-18  Score=120.91  Aligned_cols=124  Identities=20%  Similarity=0.288  Sum_probs=84.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+........  .....++..|++||++.+..++.++|+||||++++++++ |+.||.....  ..+..
T Consensus       155 ~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~  230 (280)
T cd05043         155 QVKITDNALSRDLFPMDYHCL--GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAA  230 (280)
T ss_pred             cEEECCCCCcccccCCceEEe--CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHH
Confidence            579999999986543211111  111234667999999888888999999999999999998 9999865321  11111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....        .    ...               ......+.+++.+||..||++|||+.++++.|+.+.+.
T Consensus       231 ~~~~~~~--------~----~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         231 YLKDGYR--------L----AQP---------------INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             HHHcCCC--------C----CCC---------------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            1111000        0    000               01123467899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.74  E-value=2.8e-18  Score=120.83  Aligned_cols=125  Identities=22%  Similarity=0.365  Sum_probs=84.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|+|||++.+..++.++|+||||++++++++ |..||......  ....
T Consensus       158 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--~~~~  233 (288)
T cd05093         158 LVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIE  233 (288)
T ss_pred             cEEeccCCccccccCCce--eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            478999999986533211  111122335678999999888788999999999999999998 88888543211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+..   ..        ......                .....+.+++.+||+.||.+|||+.+++..|+++.++.
T Consensus       234 ~i~~---~~--------~~~~~~----------------~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~  283 (288)
T cd05093         234 CITQ---GR--------VLQRPR----------------TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS  283 (288)
T ss_pred             HHHc---CC--------cCCCCC----------------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence            1100   00        000000                11234788999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.74  E-value=3.9e-18  Score=124.40  Aligned_cols=122  Identities=23%  Similarity=0.333  Sum_probs=80.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++|+||||++++++++ |..||....... ....
T Consensus       252 ~~kl~DfG~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~  328 (375)
T cd05104         252 ITKICDFGLARDIRNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYK  328 (375)
T ss_pred             cEEEecCccceeccCcccc--cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHH
Confidence            4789999999866432111  11111234567999999988889999999999999999998 888886532111 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+....            ....+.               .....+.+|+.+||+.||++|||+.+|++.|++.
T Consensus       329 ~~~~~~------------~~~~~~---------------~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         329 MIKEGY------------RMLSPE---------------CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHhCc------------cCCCCC---------------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            111100            000000               1123467899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.74  E-value=2.4e-18  Score=122.69  Aligned_cols=69  Identities=17%  Similarity=0.283  Sum_probs=52.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++........ ........|+..|+|||++.+. .++.++|+||+||+++++++|+.||...
T Consensus       150 ~~kl~DfG~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         150 RVKIADMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cEEEeecCceeccCCCCcc-ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            4899999999876432111 1112235678999999998764 4788999999999999999999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.74  E-value=6.2e-18  Score=117.57  Aligned_cols=123  Identities=24%  Similarity=0.299  Sum_probs=82.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||+++.+....    .......++..|++||.+.+..++.++|+||||++++++++|+.||....   ......
T Consensus       144 ~~~l~d~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~  216 (267)
T cd08224         144 VVKLGDLGLGRFFSSKT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSL  216 (267)
T ss_pred             cEEEeccceeeeccCCC----cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHH
Confidence            46899999987654321    11122357888999999888788999999999999999999999985421   111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .......    ...+     .+              .......+.+++.+||+.+|++|||+.+|++.|.+++
T Consensus       217 ~~~~~~~----~~~~-----~~--------------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         217 CKKIEKC----DYPP-----LP--------------ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HhhhhcC----CCCC-----CC--------------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            1000000    0000     00              0022334678899999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.74  E-value=7.9e-18  Score=118.73  Aligned_cols=122  Identities=25%  Similarity=0.400  Sum_probs=81.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......  .......++..|++||.+.+..++.++|+|||||+++++++ |..||......  ....
T Consensus       170 ~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~  245 (293)
T cd05053         170 VMKIADFGLARDIHHIDYY--RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--ELFK  245 (293)
T ss_pred             eEEeCccccccccccccce--eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--HHHH
Confidence            4789999999876432111  11111234567999999887788999999999999999997 88888543111  0000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      ...           .. .....+               ......+.+|+.+||+.||.+|||+.++++.|+++.
T Consensus       246 ~~~-----------~~-~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         246 LLK-----------EG-YRMEKP---------------QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHH-----------cC-CcCCCC---------------CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            000           00 000000               012334678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.74  E-value=5.8e-18  Score=118.08  Aligned_cols=121  Identities=19%  Similarity=0.315  Sum_probs=81.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+........  .....++..|++||++....++.++|+|||||+++|+++ |..||.+....  ....
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~  226 (273)
T cd05035         151 TVCVADFGLSKKIYSGDYYRQ--GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYD  226 (273)
T ss_pred             eEEECCccceeeccccccccc--cccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            478999999987643311111  111224567999999877788999999999999999998 88888543211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ....           ...... +               ......+.+++.+||+.||++|||+.++++.|+.+
T Consensus       227 ~~~~-----------~~~~~~-~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         227 YLRH-----------GNRLKQ-P---------------EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHc-----------CCCCCC-C---------------cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1110           000000 0               02234578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.74  E-value=4.8e-18  Score=118.22  Aligned_cols=123  Identities=23%  Similarity=0.311  Sum_probs=83.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......    .......|+..|+|||.+.+..++.++|+||+|++++++++|..||.............
T Consensus       144 ~~~l~d~g~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~  219 (267)
T cd08228         144 VVKLGDLGLGRFFSSKT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK  219 (267)
T ss_pred             CEEECccccceeccchh----HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH
Confidence            47899999988764321    11112357788999999887778899999999999999999999985432111111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      +...   ..    .+.    .               .......+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       220 ~~~~---~~----~~~----~---------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         220 IEQC---DY----PPL----P---------------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HhcC---CC----CCC----C---------------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            1100   00    000    0               0022344678999999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.74  E-value=2.5e-18  Score=129.33  Aligned_cols=117  Identities=25%  Similarity=0.359  Sum_probs=80.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+.....  ........|++.|+|||++.+..++.++|||||||+++++++|+.||.+..     ....
T Consensus       181 ~vkL~DFGls~~~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~  253 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVS--DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEV  253 (496)
T ss_pred             CEEEEecccCeecccccc--ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHH
Confidence            579999999987643211  111223568999999999988889999999999999999999999996421     1111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ........    ..+    ..                ......+.+++.+||+.||.+||++.++++.
T Consensus       254 ~~~~~~~~----~~~----~~----------------~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        254 MHKTLAGR----YDP----LP----------------PSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHhcCC----CCC----CC----------------CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            11100000    000    00                0123346789999999999999999999764

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.74  E-value=3.8e-18  Score=119.49  Aligned_cols=119  Identities=25%  Similarity=0.434  Sum_probs=79.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|+|||++.+..++.++|+||||++++++++ |..||......  ....
T Consensus       160 ~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~  235 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIE  235 (280)
T ss_pred             eEEECCcccceecccCcc--eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            478999999876432211  111122335678999999988889999999999999999998 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+..           .... ..+               ......+.+++.+||+.||++|||+.|+++.|+
T Consensus       236 ~~~~-----------~~~~-~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         236 CITQ-----------GRLL-QRP---------------RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHc-----------CCcC-CCC---------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            1110           0000 000               011234678999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.73  E-value=8e-18  Score=117.12  Aligned_cols=123  Identities=22%  Similarity=0.281  Sum_probs=82.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||++........    ......|+..|++||.+.+..++.++|+||||++++++++|..||.............
T Consensus       144 ~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  219 (267)
T cd08229         144 VVKLGDLGLGRFFSSKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK  219 (267)
T ss_pred             CEEECcchhhhccccCCc----ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh
Confidence            478999999876643211    1122357889999999888788899999999999999999999986432111111110


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      +.        ....+..   ..               ......+.+++.+||+.||.+|||+.+|++.+++++
T Consensus       220 ~~--------~~~~~~~---~~---------------~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         220 IE--------QCDYPPL---PS---------------DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             hh--------cCCCCCC---Cc---------------ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            00        0000000   00               022345678899999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=2.3e-18  Score=128.55  Aligned_cols=108  Identities=20%  Similarity=0.228  Sum_probs=81.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++....    .....++.|||+-|+|||++....|+..+|-|+||+++|||+.|+.||.+...+       
T Consensus       506 h~kiADFGlcKe~m~----~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-------  574 (694)
T KOG0694|consen  506 HVKIADFGLCKEGMG----QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-------  574 (694)
T ss_pred             cEEecccccccccCC----CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-------
Confidence            479999999986532    233456789999999999999999999999999999999999999999764222       


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                                ++++.++..+.             .++.....+.+.|+.+.+..+|++|..+
T Consensus       575 ----------e~FdsI~~d~~-------------~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  575 ----------EVFDSIVNDEV-------------RYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             ----------HHHHHHhcCCC-------------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence                      12222221111             1122445567889999999999999987

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.73  E-value=4.6e-18  Score=119.37  Aligned_cols=120  Identities=22%  Similarity=0.325  Sum_probs=79.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........+++.|+|||.+.+..++.++|+||+||+++|+++ |..||.+....  ....
T Consensus       162 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~  237 (283)
T cd05091         162 NVKISDLGLFREVYAADY--YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVIE  237 (283)
T ss_pred             ceEecccccccccccchh--eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            479999999886543211  111122335678999999887888999999999999999998 88887543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+.           +.... ..+               ..+...+.+++..||+.+|++||++.+|+..|+.
T Consensus       238 ~i~-----------~~~~~-~~~---------------~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         238 MIR-----------NRQVL-PCP---------------DDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHH-----------cCCcC-CCC---------------CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            111           00000 000               0223446789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.73  E-value=8.8e-18  Score=116.82  Aligned_cols=120  Identities=22%  Similarity=0.380  Sum_probs=80.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.........   .....++..|++||.+.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       142 ~~kl~df~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~  216 (263)
T cd05052         142 LVKVADFGLSRLMTGDTYTA---HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYE  216 (263)
T ss_pred             cEEeCCCccccccccceeec---cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            47899999998764321110   111223567999999888888999999999999999998 88888542111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+...            .....+.               .....+.+++.+||+.||++|||+.++++.|+++
T Consensus       217 ~~~~~------------~~~~~~~---------------~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         217 LLEKG------------YRMERPE---------------GCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHCC------------CCCCCCC---------------CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            11000            0000000               1234467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.73  E-value=1.5e-18  Score=127.63  Aligned_cols=115  Identities=21%  Similarity=0.304  Sum_probs=83.5

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      ..+|+||||+++.+..+    ....+...||+.|||||.+.+.+|+..+|.||+||++||+..|++||...  .-..+..
T Consensus       137 ~~~KlcdFg~Ar~m~~~----t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--si~~Lv~  210 (808)
T KOG0597|consen  137 GTLKLCDFGLARAMSTN----TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--SITQLVK  210 (808)
T ss_pred             CceeechhhhhhhcccC----ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--HHHHHHH
Confidence            36899999999988654    33334457999999999999999999999999999999999999999642  1111222


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+..                +...            ........+..++...+..||.+|.|..+++..
T Consensus       211 ~I~~----------------d~v~------------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  211 SILK----------------DPVK------------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             HHhc----------------CCCC------------CcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence            2111                0000            011334456778888899999999999998754

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=9.2e-19  Score=131.65  Aligned_cols=116  Identities=20%  Similarity=0.307  Sum_probs=81.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC--CccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR--VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~--~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||-++.+..-    ......+.||..|||||++..++  |+..+|||||||.+.||.+|++||........  .
T Consensus       714 vlKISDFGTsKRLAgi----nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--A  787 (1226)
T KOG4279|consen  714 VLKISDFGTSKRLAGI----NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--A  787 (1226)
T ss_pred             eEEecccccchhhccC----CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--h
Confidence            4799999999876431    12234567999999999998775  88999999999999999999999965432211  1


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+--+.+..     -.+                    -..........++++|+.+||.+||+|.+++.
T Consensus       788 MFkVGmyKv-----HP~--------------------iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  788 MFKVGMYKV-----HPP--------------------IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             hhhhcceec-----CCC--------------------CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            111111110     000                    01133445677999999999999999999875

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.73  E-value=3.7e-18  Score=118.34  Aligned_cols=122  Identities=20%  Similarity=0.300  Sum_probs=81.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......... ......++..|++||.+....++.++|+||||++++|+++ |+.||......  ....
T Consensus       133 ~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~  209 (257)
T cd05116         133 YAKISDFGLSKALGADENYYK-AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQ  209 (257)
T ss_pred             eEEECCCccccccCCCCCeee-ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            478999999987644321111 1112234578999999877778889999999999999998 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+....            ....+.               .....+.+++.+||+.||++||++.+|.+.|.+.
T Consensus       210 ~i~~~~------------~~~~~~---------------~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         210 MIESGE------------RMECPQ---------------RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHCCC------------CCCCCC---------------CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            111100            000000               1233467899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.73  E-value=2.9e-18  Score=124.16  Aligned_cols=65  Identities=25%  Similarity=0.198  Sum_probs=52.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....     .......|+..|+|||++.+..++.++|+|||||+++++++|+.||.+.
T Consensus       157 ~~kl~Dfg~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  221 (355)
T cd07874         157 TLKILDFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR  221 (355)
T ss_pred             CEEEeeCcccccCCCc-----cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            4799999999865332     1112346889999999998888999999999999999999999999653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.73  E-value=4.3e-18  Score=119.79  Aligned_cols=117  Identities=22%  Similarity=0.277  Sum_probs=78.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|+..|+|||++.+..++.++|+||+||+++++++|+.||.......  ....
T Consensus       140 ~~kl~Dfg~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~  212 (285)
T cd05631         140 HIRISDLGLAVQIPEGE-----TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREE  212 (285)
T ss_pred             CEEEeeCCCcEEcCCCC-----eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHH
Confidence            47899999998754321     1123468999999999988889999999999999999999999997532211  0010


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~~  149 (163)
                      +.....       ....  ...               ......+.+|+.+||+.||.+||+     ++++++.
T Consensus       213 ~~~~~~-------~~~~--~~~---------------~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         213 VDRRVK-------EDQE--EYS---------------EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             HHHHhh-------cccc--cCC---------------ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            000000       0000  000               012234678999999999999997     7888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.73  E-value=6.8e-18  Score=118.72  Aligned_cols=136  Identities=17%  Similarity=0.137  Sum_probs=79.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|+..|+|||++.+..++.++|+||+||+++++++|+.||....... .+...
T Consensus       146 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~  219 (288)
T cd07863         146 QVKLADFGLARIYSCQM-----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKI  219 (288)
T ss_pred             CEEECccCccccccCcc-----cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHH
Confidence            47899999998654321     1122457889999999988889999999999999999999999986532211 11111


Q ss_pred             HHh---cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKN---ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...   .....+.....- .......    ................+.+++.+||+.||++|||+.+++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         220 FDLIGLPPEDDWPRDVTL-PRGAFSP----RGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HHHhCCCChhhCcccccc-cccccCC----CCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            100   000011000000 0000000    0000001111122344678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.73  E-value=1.7e-18  Score=121.62  Aligned_cols=141  Identities=21%  Similarity=0.244  Sum_probs=88.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC-cchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~~~~   80 (163)
                      .+||.|||-+....+.       .+..+.|.-|+|||++.+-.|+..+||||+||++.|+.+|...|......+ ..+-+
T Consensus       250 ~I~vIDFGsAtf~~e~-------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMe  322 (415)
T KOG0671|consen  250 AIKVIDFGSATFDHEH-------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMME  322 (415)
T ss_pred             ceEEEecCCcceeccC-------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHH
Confidence            5789999999875321       134578999999999999999999999999999999999999997654211 12222


Q ss_pred             HHHhcCchhhhhhh--ccccccC-----CCCCCC-------ch-hhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           81 FVKNALPEQISEVL--DPLFVTG-----GEEGEG-------TA-EEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        81 ~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~-------~~-~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                      .+.++.|.....--  .+.+...     .....+       .. ...........+...+++|+.++|.+||++|+|+.|
T Consensus       323 rIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~E  402 (415)
T KOG0671|consen  323 RILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLRE  402 (415)
T ss_pred             HhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHH
Confidence            23333332111110  0000000     000000       00 001111122344567899999999999999999999


Q ss_pred             HHHH
Q 031224          146 VVNN  149 (163)
Q Consensus       146 v~~~  149 (163)
                      ++..
T Consensus       403 AL~H  406 (415)
T KOG0671|consen  403 ALSH  406 (415)
T ss_pred             HhcC
Confidence            8753

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.73  E-value=4.1e-18  Score=122.83  Aligned_cols=62  Identities=26%  Similarity=0.367  Sum_probs=50.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....       .....|+..|+|||++.+ ..++.++||||+||+++++++|+.||.+
T Consensus       156 ~~kl~Dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  218 (343)
T cd07878         156 ELRILDFGLARQADDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG  218 (343)
T ss_pred             CEEEcCCccceecCCC-------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            4799999999865321       123468899999999876 3588899999999999999999999965

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=7.2e-18  Score=123.55  Aligned_cols=66  Identities=26%  Similarity=0.346  Sum_probs=51.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++......   ........||+.|+|||++.+..++.++|+||+||+++++++|+.||..
T Consensus       220 ~vkL~DFG~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~  285 (391)
T PHA03212        220 DVCLGDFGAACFPVDIN---ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE  285 (391)
T ss_pred             CEEEEeCCccccccccc---ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            47999999997542211   1112235689999999999888899999999999999999999987754

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.72  E-value=8e-18  Score=120.84  Aligned_cols=63  Identities=27%  Similarity=0.462  Sum_probs=52.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....      ......|+..|+|||++.+..++.++|+|||||+++++++|+.||..
T Consensus       142 ~~kl~Dfg~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         142 EIKLCDFGVSGQLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             cEEEccCccccccccc------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            4789999998765332      11234688999999999888899999999999999999999999964

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.72  E-value=1.1e-17  Score=117.99  Aligned_cols=124  Identities=24%  Similarity=0.349  Sum_probs=82.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++..........  .....++..|++||...+..++.++|+||||++++++++ |..||.+....  .+..
T Consensus       165 ~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~  240 (290)
T cd05045         165 KMKISDFGLSRDVYEEDSYVK--RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE--RLFN  240 (290)
T ss_pred             cEEeccccccccccCccchhc--ccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            478999999986533211111  112234667999998877778999999999999999998 99998543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      ..            ........+.               .....+.+++.+||+.+|.+||++.++++.|+++..+
T Consensus       241 ~~------------~~~~~~~~~~---------------~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         241 LL------------KTGYRMERPE---------------NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             HH------------hCCCCCCCCC---------------CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence            11            1100000000               1223467899999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.72  E-value=5.2e-18  Score=117.55  Aligned_cols=123  Identities=20%  Similarity=0.364  Sum_probs=82.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......... ......++..|++||...+..++.++|+||||++++++++ |..||.....  .....
T Consensus       133 ~~kl~df~~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~  209 (257)
T cd05060         133 QAKISDFGMSRALGAGSDYYR-ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIA  209 (257)
T ss_pred             cEEeccccccceeecCCcccc-cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHH
Confidence            478999999987643321111 1111223457999999888889999999999999999997 9999865321  11111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .+.....            ...+               ......+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       210 ~~~~~~~------------~~~~---------------~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         210 MLESGER------------LPRP---------------EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHcCCc------------CCCC---------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            1111000            0000               011234678999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.72  E-value=1.8e-17  Score=117.21  Aligned_cols=122  Identities=20%  Similarity=0.246  Sum_probs=81.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++.......     .......+..|++||+.....++.++|+|||||+++++++ |..||.......  ...
T Consensus       157 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--~~~  229 (297)
T cd05089         157 ASKIADFGLSRGEEVYV-----KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--LYE  229 (297)
T ss_pred             eEEECCcCCCcccccee-----ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHH
Confidence            47899999986432110     0111122456999999887788999999999999999997 999985432110  000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ..           ... .....+               ......+.+|+.+||+.+|.+|||++++++.|..+....
T Consensus       230 ~~-----------~~~-~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         230 KL-----------PQG-YRMEKP---------------RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             HH-----------hcC-CCCCCC---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            00           000 000000               012234678999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.72  E-value=3.5e-18  Score=116.09  Aligned_cols=118  Identities=19%  Similarity=0.236  Sum_probs=80.9

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCC------CCCccccceehhhHHHHHHHhCCCCCcccccc
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG------SRVSTYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~------~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      |++||+|||++..+..+     ......|||++|.|||.+.-      ..|+..+|+|++|++++.++.|.+||....- 
T Consensus       160 ~~i~isDFGFa~~l~~G-----ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-  233 (411)
T KOG0599|consen  160 MNIKISDFGFACQLEPG-----EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-  233 (411)
T ss_pred             cceEEeccceeeccCCc-----hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-
Confidence            57899999999988654     23345789999999998743      2377889999999999999999999964210 


Q ss_pred             CcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           75 GLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..-+...            .+.......++             ..+......+|+.+||+.||++|.|++|.+..
T Consensus       234 mlMLR~I------------meGkyqF~spe-------------Wadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  234 MLMLRMI------------MEGKYQFRSPE-------------WADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             HHHHHHH------------HhcccccCCcc-------------hhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            0011111            11111111111             11223345678899999999999999999864

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.72  E-value=3.3e-18  Score=124.26  Aligned_cols=65  Identities=25%  Similarity=0.234  Sum_probs=53.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....     .......|+..|+|||++.+..++.++|+|||||+++++++|+.||.+.
T Consensus       164 ~~kL~DfG~a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  228 (364)
T cd07875         164 TLKILDFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT  228 (364)
T ss_pred             cEEEEeCCCccccCCC-----CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence            5799999999865332     1112346789999999998888999999999999999999999999653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.72  E-value=3.9e-18  Score=113.99  Aligned_cols=127  Identities=17%  Similarity=0.202  Sum_probs=84.7

Q ss_pred             ceeecccccccccCcc-----ccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEA-----IRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+++.|||.+...+-.     .....+.+.....|+.|+|||.+..   ...++++|||||||++|+++.|..||+..+.
T Consensus       167 ~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~  246 (302)
T KOG2345|consen  167 LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ  246 (302)
T ss_pred             ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh
Confidence            4688999998765321     1111122223345889999998753   3478999999999999999999999987654


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ....+.-.+           .++.+......               -..+.+..+++.|++.||.+||++.+++..++.+
T Consensus       247 ~GgSlaLAv-----------~n~q~s~P~~~---------------~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  247 QGGSLALAV-----------QNAQISIPNSS---------------RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             cCCeEEEee-----------eccccccCCCC---------------CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            332222111           11111111111               1234577899999999999999999999998876


Q ss_pred             H
Q 031224          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      .
T Consensus       301 i  301 (302)
T KOG2345|consen  301 I  301 (302)
T ss_pred             c
Confidence            3

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.72  E-value=3.2e-18  Score=124.95  Aligned_cols=119  Identities=18%  Similarity=0.238  Sum_probs=82.8

Q ss_pred             CceeecccccccccCccccC---------CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            1 MTAHVGDFGLTRFIPEAIRS---------NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      |++||+|||-|+.+......         .......++||-.|.+||++..+..+..+|+|+|||+++.|+.|++||.+.
T Consensus       211 mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~  290 (604)
T KOG0592|consen  211 GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA  290 (604)
T ss_pred             CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence            67999999999988653211         111225589999999999999999999999999999999999999999764


Q ss_pred             cccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           72 FAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ++-. .+...+..          +-.+..                   .....+.+|+.+.|..||.+|+|+.+|.+.
T Consensus       291 Neyl-iFqkI~~l----------~y~fp~-------------------~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  291 NEYL-IFQKIQAL----------DYEFPE-------------------GFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             cHHH-HHHHHHHh----------cccCCC-------------------CCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            2210 01111000          000111                   112335667778888999999999888654

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.72  E-value=5.6e-18  Score=120.70  Aligned_cols=69  Identities=17%  Similarity=0.283  Sum_probs=52.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++........ ........|+..|+|||++.+. .++.++|+||+||+++++++|+.||...
T Consensus       150 ~~kl~DfG~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         150 RVKIADMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cEEEeeccceeccCCCccc-ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            4799999999876433111 1112234678899999988764 4788999999999999999999999643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.72  E-value=4.8e-18  Score=119.75  Aligned_cols=138  Identities=17%  Similarity=0.171  Sum_probs=78.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....    ........++..|+|||.+.+ ..++.++|+||+||+++++++|+.||.+..... .+..
T Consensus       141 ~~kl~DfG~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~  215 (288)
T cd07871         141 ELKLADFGLARAKSVP----TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHL  215 (288)
T ss_pred             CEEECcCcceeeccCC----CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            4799999998764322    111223457889999998865 458899999999999999999999996532211 1111


Q ss_pred             HHH---hcCchhhhhhhccc-cc-cCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVK---NALPEQISEVLDPL-FV-TGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~---~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...   ......+....+.. +. ...+.......    ..........+.+|+.+||+.||.+|||++|+++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         216 IFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPL----INHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHHhCCCChHHhhccccchhhhccccCccCCCch----HHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            100   00111111100000 00 00000000000    0000011234678999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.72  E-value=5.8e-18  Score=119.88  Aligned_cols=127  Identities=23%  Similarity=0.331  Sum_probs=93.0

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~   79 (163)
                      +++||+|-.++|-+.....+.....  ..-...||++|.+.+..|+..+|+||||+++||+++ |+.||....+-  ...
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDn--EnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf--Em~  508 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDN--ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF--EME  508 (563)
T ss_pred             eeEEeccchhccccCcccccccCCC--CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--HHH
Confidence            4689999999987654433322211  223568999999999999999999999999999997 99999765322  223


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .++.+.++  +.   +|                      -+|+.++..+|.-||..+|++||+++|++..|.+.+.++.
T Consensus       509 ~ylkdGyR--la---QP----------------------~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt  560 (563)
T KOG1024|consen  509 HYLKDGYR--LA---QP----------------------FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLT  560 (563)
T ss_pred             HHHhccce--ec---CC----------------------CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHh
Confidence            33333221  11   11                      1556678889999999999999999999999999887764

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.72  E-value=8.1e-18  Score=122.04  Aligned_cols=65  Identities=25%  Similarity=0.215  Sum_probs=52.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++....+     .......|+..|+|||.+.+..++.++|+||+||+++++++|+.||.+.
T Consensus       161 ~~kl~Dfg~a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~  225 (359)
T cd07876         161 TLKILDFGLARTACTN-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT  225 (359)
T ss_pred             CEEEecCCCccccccC-----ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence            4799999999764322     1112346788999999998888999999999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=1.4e-17  Score=119.12  Aligned_cols=136  Identities=18%  Similarity=0.271  Sum_probs=101.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC----C-c-cccceehhhHHHHHHHhC----------C
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR----V-S-TYGDVYSYGILLLETFTG----------K   65 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~----~-~-~~~di~s~g~~~~e~~~g----------~   65 (163)
                      .+.|+|+|+|..+.+............+||..|||||++...-    | + ..+||||||.++||+..+          +
T Consensus       354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~  433 (513)
T KOG2052|consen  354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ  433 (513)
T ss_pred             cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence            4679999999988765444344556678999999999985421    2 1 447999999999998752          4


Q ss_pred             CCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           66 RPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        66 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                      .||.+..+.+....+.......++++..++..+...                  .++..+.++|+.||..+|+.|.|+-.
T Consensus       434 ~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~------------------~~l~~m~klMkeCW~~Np~aRltALr  495 (513)
T KOG2052|consen  434 LPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSD------------------PALRVMAKLMKECWYANPAARLTALR  495 (513)
T ss_pred             CCcccCCCCCCCHHHHhcceeecccCCCCCcccccC------------------HHHHHHHHHHHHhhcCCchhhhHHHH
Confidence            688887766666666655555555554444443322                  67888999999999999999999999


Q ss_pred             HHHHHHHhHH
Q 031224          146 VVNNLQKVKS  155 (163)
Q Consensus       146 v~~~l~~~~~  155 (163)
                      +.+.|.++.+
T Consensus       496 iKKtl~~l~~  505 (513)
T KOG2052|consen  496 IKKTLAKLSN  505 (513)
T ss_pred             HHHHHHHHhc
Confidence            9999998875

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.72  E-value=6.1e-18  Score=120.01  Aligned_cols=126  Identities=17%  Similarity=0.237  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh--CCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT--GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~--g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++.+......  .......++..|+|||++....++.++|+||||++++++++  +..||......  ...
T Consensus       176 ~~kl~DfG~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~  251 (304)
T cd05096         176 TIKIADFGMSRNLYAGDYY--RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE--QVI  251 (304)
T ss_pred             cEEECCCccceecccCcee--EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH--HHH
Confidence            4799999999865332111  11112335678999999888889999999999999999986  45666543211  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ..........    .........                ..+...+.+|+.+||+.||++|||+.+|.+.|+
T Consensus       252 ~~~~~~~~~~----~~~~~~~~~----------------~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         252 ENAGEFFRDQ----GRQVYLFRP----------------PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHhhhc----cccccccCC----------------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            1110000000    000000000                022345788999999999999999999988875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.72  E-value=6.7e-18  Score=119.77  Aligned_cols=66  Identities=26%  Similarity=0.384  Sum_probs=50.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....    ........++..|+|||++.+. .++.++|+||+||+++++++|..||.+.
T Consensus       141 ~~kl~Dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  207 (303)
T cd07869         141 ELKLADFGLARAKSVP----SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM  207 (303)
T ss_pred             CEEECCCCcceeccCC----CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            4799999998754321    1111234578899999987654 4788899999999999999999999754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.71  E-value=5.7e-18  Score=115.01  Aligned_cols=117  Identities=20%  Similarity=0.265  Sum_probs=82.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      ++|+||||++..+.+.     ...+...|...|||||.+.-   ..|+-++||||||+.++|+.+|+.||.+...+..-+
T Consensus       230 niKlCDFGIsGrlvdS-----kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~l  304 (391)
T KOG0983|consen  230 NIKLCDFGISGRLVDS-----KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVL  304 (391)
T ss_pred             CEEeecccccceeecc-----cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHH
Confidence            5899999999887553     23334578999999998853   348899999999999999999999998754433222


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...+. ..+    ..+++    ..                 .....+..|...||..|+.+||.-.+++++
T Consensus       305 tkvln-~eP----P~L~~----~~-----------------gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  305 TKVLN-EEP----PLLPG----HM-----------------GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             HHHHh-cCC----CCCCc----cc-----------------CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            22221 111    11111    00                 123457888999999999999999988764

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.71  E-value=1.9e-17  Score=118.12  Aligned_cols=124  Identities=19%  Similarity=0.300  Sum_probs=82.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+........  .....++..|++||.+.+..++.++|+||||++++|+++ |..||.+....  ....
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~  222 (316)
T cd05108         147 HVKITDFGLAKLLGADEKEYH--AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS  222 (316)
T ss_pred             cEEEccccccccccCCCccee--ccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            479999999987643211111  111223567999999988889999999999999999997 89998653111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .....            .....+.               .+...+..++.+||+.+|++|||+.+++..|..+...
T Consensus       223 ~~~~~------------~~~~~~~---------------~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         223 ILEKG------------ERLPQPP---------------ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             HHhCC------------CCCCCCC---------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence            11000            0000000               1122357799999999999999999999998877653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.71  E-value=4.3e-18  Score=118.57  Aligned_cols=145  Identities=17%  Similarity=0.131  Sum_probs=87.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+|+.+.-+    ...-++.++|.+|+|||++.+.. |+..+|+||+||++.|+++++..|.+..+.+.-...
T Consensus       158 ~lKlaDFGlAra~~ip----~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~I  233 (323)
T KOG0594|consen  158 VLKLADFGLARAFSIP----MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRI  233 (323)
T ss_pred             cEeeeccchHHHhcCC----cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence            4799999999976432    22234567899999999999874 899999999999999999999998765431111111


Q ss_pred             --HHHhcCchhhhhhhcc-ccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH--HHHh
Q 031224           81 --FVKNALPEQISEVLDP-LFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN--LQKV  153 (163)
Q Consensus        81 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~--l~~~  153 (163)
                        .+..+....+.....- ......+.+..   +...............+++..|++++|.+|.|+..++.+  +..+
T Consensus       234 f~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~---~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  234 FRLLGTPNEKDWPGVSSLPDYKAPFPKWPG---PKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             HHHcCCCCccCCCCccccccccccCcCCCC---ccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence              1111111122211110 00001111100   011111111111457889999999999999999999876  5544

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.71  E-value=1e-17  Score=116.23  Aligned_cols=120  Identities=25%  Similarity=0.353  Sum_probs=80.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||+++........   ......++..|++||+.....++.++|+||||++++++++ |..||......  ....
T Consensus       141 ~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~  215 (261)
T cd05072         141 MCKIADFGLARVIEDNEYT---AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMS  215 (261)
T ss_pred             cEEECCCccceecCCCcee---ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHH
Confidence            4789999999876432111   1112235667999999887788899999999999999998 89998542111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+.....       .+    ..                ......+.+++.+||+.+|++|||++++.+.|+++
T Consensus       216 ~~~~~~~-------~~----~~----------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         216 ALQRGYR-------MP----RM----------------ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HHHcCCC-------CC----CC----------------CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            1111000       00    00                01123467899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.71  E-value=3.4e-17  Score=131.84  Aligned_cols=117  Identities=19%  Similarity=0.395  Sum_probs=82.7

Q ss_pred             cccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHHHhcCch-hhhhhhccccccCCCCCCC
Q 031224           29 KGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPE-QISEVLDPLFVTGGEEGEG  107 (163)
Q Consensus        29 ~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  107 (163)
                      .++..|+|||++.+..++.++|||||||+++|+++|+.||+...........+....... .....+++.+.....    
T Consensus       839 ~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  914 (968)
T PLN00113        839 FISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS----  914 (968)
T ss_pred             cccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC----
Confidence            567899999999888899999999999999999999999965433333343333322211 223333443322111    


Q ss_pred             chhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224          108 TAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                               ........+.+++.+||+.||++||||+|+++.|+++.....
T Consensus       915 ---------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~  956 (968)
T PLN00113        915 ---------VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSS  956 (968)
T ss_pred             ---------ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence                     112344567889999999999999999999999999876443

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.71  E-value=1.4e-17  Score=116.18  Aligned_cols=121  Identities=20%  Similarity=0.303  Sum_probs=80.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......  .......++..|++||...+..++.++|+||||++++++++ |+.||.....  .....
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~  225 (272)
T cd05075         150 NVCVADFGLSKKIYNGDYY--RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYD  225 (272)
T ss_pred             CEEECCCCcccccCcccce--ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Confidence            4789999999876432111  11112235667999999888888999999999999999998 7888854211  11111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+...          ... ...                ......+.+++.+||+.||++|||+.++++.|+++
T Consensus       226 ~~~~~----------~~~-~~~----------------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         226 YLRQG----------NRL-KQP----------------PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHcC----------CCC-CCC----------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            11100          000 000                01223467899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.71  E-value=2e-17  Score=124.33  Aligned_cols=118  Identities=25%  Similarity=0.309  Sum_probs=84.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+.+.++.+...+.-. ....-...|.|||.+....|+.++|+|+||+.+|||++ |..||.+....      
T Consensus       250 tVKI~DFGLmRaLg~ned~Yvm~-p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~------  322 (1039)
T KOG0199|consen  250 TVKICDFGLMRALGENEDMYVMA-PQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI------  322 (1039)
T ss_pred             eeeeecccceeccCCCCcceEec-CCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH------
Confidence            58999999999988764444221 11223457999999999999999999999999999998 88898664221      


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                              .+.+.+|..-               .......|.+++-.+|++||..+|.+|||+..|.+.
T Consensus       323 --------qIL~~iD~~e---------------rLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  323 --------QILKNIDAGE---------------RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             --------HHHHhccccc---------------cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence                    1111111100               001122667889999999999999999999998744

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.71  E-value=1e-17  Score=122.98  Aligned_cols=124  Identities=24%  Similarity=0.348  Sum_probs=82.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++||||||++++++++ |..||....... ....
T Consensus       275 ~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-~~~~  351 (400)
T cd05105         275 IVKICDFGLARDIMHDSNY--VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-TFYN  351 (400)
T ss_pred             EEEEEeCCcceeccccccc--cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-HHHH
Confidence            4789999999865432111  11122345678999999888888999999999999999997 888886532111 0000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+....        ..    ..+               ......+.+++.+||+.||++|||+.+|.+.|..+.+
T Consensus       352 ~~~~~~--------~~----~~~---------------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         352 KIKSGY--------RM----AKP---------------DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HHhcCC--------CC----CCC---------------ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            000000        00    000               0223456789999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.71  E-value=2.5e-17  Score=115.44  Aligned_cols=124  Identities=20%  Similarity=0.316  Sum_probs=81.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.........  ......++..|++||...+..++.++|+|||||+++|+++ |..||......  ....
T Consensus       147 ~~kL~dfG~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~  222 (279)
T cd05109         147 HVKITDFGLARLLDIDETEY--HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPD  222 (279)
T ss_pred             cEEECCCCceeeccccccee--ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            47999999998764321110  1111234567999999888889999999999999999998 88888542111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+...            ......               ......+.+++.+||+.||++||++.++++.|..+...
T Consensus       223 ~~~~~------------~~~~~~---------------~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         223 LLEKG------------ERLPQP---------------PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             HHHCC------------CcCCCC---------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence            11100            000000               01223467789999999999999999999998877543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.71  E-value=1.4e-17  Score=116.61  Aligned_cols=119  Identities=23%  Similarity=0.378  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......  .......++..|++||++.+..++.++|+|||||+++++++ |..||......  ....
T Consensus       157 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~  232 (277)
T cd05036         157 VAKIADFGMARDIYRASYY--RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVME  232 (277)
T ss_pred             ceEeccCccccccCCccce--ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            3789999999875322110  00111223467999999988889999999999999999996 88998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+....            ....+               ......+.+++.+||+.+|++|||+.+|++.|.
T Consensus       233 ~~~~~~------------~~~~~---------------~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         233 FVTGGG------------RLDPP---------------KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHcCC------------cCCCC---------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            111000            00000               011234678999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.71  E-value=1.5e-17  Score=115.43  Aligned_cols=122  Identities=20%  Similarity=0.313  Sum_probs=80.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+........ ......++..|++||.+....++.++|+||||++++++++ |..||.+....  ....
T Consensus       133 ~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~  209 (257)
T cd05115         133 YAKISDFGLSKALGADDSYYK-ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMS  209 (257)
T ss_pred             cEEeccCCccccccCCcccee-ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHH
Confidence            478999999986543211111 1111223567999999887778899999999999999996 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+.....    ..++                       ..+...+.+++.+||+.+|++||++.+|.+.|+.+
T Consensus       210 ~~~~~~~----~~~~-----------------------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         210 FIEQGKR----LDCP-----------------------AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHCCCC----CCCC-----------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            1110000    0000                       01234567899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.71  E-value=2.4e-17  Score=119.38  Aligned_cols=118  Identities=19%  Similarity=0.306  Sum_probs=75.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-----CCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-----RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-----~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||+++.+....    .......|+..|++||++...     ..+.++|||||||+++++++|+.||......  
T Consensus       206 ~~kL~DfG~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--  279 (353)
T PLN00034        206 NVKIADFGVSRILAQTM----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--  279 (353)
T ss_pred             CEEEcccccceeccccc----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--
Confidence            47999999998754321    111234689999999987431     2346899999999999999999999632111  


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.........            .....            ........+.+|+.+||+.||++|||+.|+++.
T Consensus       280 ~~~~~~~~~~~------------~~~~~------------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        280 DWASLMCAICM------------SQPPE------------APATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             cHHHHHHHHhc------------cCCCC------------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11111110000            00000            000223446789999999999999999999874

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.71  E-value=2e-18  Score=120.02  Aligned_cols=118  Identities=26%  Similarity=0.399  Sum_probs=75.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........+...|++||.+....++.++||||||++++|+++ |+.||.+....  ....
T Consensus       141 ~~Kl~~f~~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--~~~~  216 (259)
T PF07714_consen  141 QVKLSDFGLSRPISEKSK--YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--EIIE  216 (259)
T ss_dssp             EEEEESTTTGEETTTSSS--EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--HHHH
T ss_pred             cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccc
Confidence            589999999987632111  111122345678999999887778999999999999999999 67888553111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .+.....           . ..+               ..+...+..++.+||+.||.+|||+.++++.|
T Consensus       217 ~~~~~~~-----------~-~~~---------------~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  217 KLKQGQR-----------L-PIP---------------DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHTTEE-----------T-TSB---------------TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccccccc-----------c-eec---------------cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            1111100           0 000               02234467899999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.70  E-value=1.2e-17  Score=115.76  Aligned_cols=116  Identities=25%  Similarity=0.354  Sum_probs=78.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++......       ....++..|++||++....++.++|+|||||+++++++ |+.||....     ...
T Consensus       140 ~~kl~dfg~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~  207 (256)
T cd05082         140 VAKVSDFGLTKEASSTQ-------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKD  207 (256)
T ss_pred             cEEecCCccceeccccC-------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHH
Confidence            47899999987643211       11234567999999887778899999999999999997 888885421     111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ....         +.........               ......+.+++.+||+.+|++|||+.++++.|+++
T Consensus       208 ~~~~---------~~~~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         208 VVPR---------VEKGYKMDAP---------------DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHH---------HhcCCCCCCC---------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            1100         0000000000               01234467889999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.70  E-value=3.5e-17  Score=116.15  Aligned_cols=122  Identities=25%  Similarity=0.337  Sum_probs=81.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||+++.........  ......++..|++||.+.+..++.++|+||+|++++++++ |..||....... ....
T Consensus       179 ~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~  255 (302)
T cd05055         179 IVKICDFGLARDIMNDSNYV--VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYK  255 (302)
T ss_pred             eEEECCCcccccccCCCcee--ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHH
Confidence            36899999998664321110  1112235678999999888888999999999999999998 999986532211 0001


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .            +........+.               .....+.+++.+||+.+|++|||+.++++.|+++
T Consensus       256 ~------------~~~~~~~~~~~---------------~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         256 L------------IKEGYRMAQPE---------------HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             H------------HHcCCcCCCCC---------------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            1            11000000000               1123467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.70  E-value=4.6e-17  Score=115.52  Aligned_cols=124  Identities=22%  Similarity=0.350  Sum_probs=82.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       175 ~~kl~D~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~  250 (304)
T cd05101         175 VMKIADFGLARDVNNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFK  250 (304)
T ss_pred             cEEECCCccceeccccccc--ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHH
Confidence            4789999999876432111  11112335678999999888788999999999999999998 77777542111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+...           . ....+               ......+.+++.+||+.+|++|||+.++++.|..+...
T Consensus       251 ~~~~~-----------~-~~~~~---------------~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         251 LLKEG-----------H-RMDKP---------------ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             HHHcC-----------C-cCCCC---------------CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            11000           0 00000               02234567899999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.70  E-value=4.6e-17  Score=116.08  Aligned_cols=126  Identities=23%  Similarity=0.352  Sum_probs=83.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++..........  .....++..|++||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~~  247 (314)
T cd05099         172 VMKIADFGLARGVHDIDYYKK--TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--ELFK  247 (314)
T ss_pred             cEEEccccccccccccccccc--cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            478999999986643211111  111224457999999888788999999999999999998 88888543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+..           ..... .+               ......+.+++.+||+.+|++|||+.++++.|.++.....
T Consensus       248 ~~~~-----------~~~~~-~~---------------~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~  298 (314)
T cd05099         248 LLRE-----------GHRMD-KP---------------SNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVS  298 (314)
T ss_pred             HHHc-----------CCCCC-CC---------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhc
Confidence            1100           00000 00               0122346679999999999999999999999999876553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.70  E-value=1.8e-17  Score=116.05  Aligned_cols=119  Identities=24%  Similarity=0.377  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||+++.........  ......++..|+|||++.+..++.++|+||||++++++++ |..||......  ....
T Consensus       157 ~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~~  232 (277)
T cd05062         157 TVKIGDFGMTRDIYETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVLR  232 (277)
T ss_pred             CEEECCCCCccccCCcceee--cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            47899999987654321111  1112245678999999888788999999999999999998 67888543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+           ..........                .....+.+++.+||+.||++|||+.++++.|+
T Consensus       233 ~~-----------~~~~~~~~~~----------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         233 FV-----------MEGGLLDKPD----------------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HH-----------HcCCcCCCCC----------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            00           0000000000                11234678999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.70  E-value=3.1e-17  Score=114.23  Aligned_cols=121  Identities=25%  Similarity=0.436  Sum_probs=80.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||+++..........  .....++..|++||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~  219 (266)
T cd05033         144 VCKVSDFGLSRRLEDSEATYT--TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIK  219 (266)
T ss_pred             CEEECccchhhccccccccee--ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHH
Confidence            478999999987642111111  111234567999999888888999999999999999987 88888542111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+.....       .+     .+               ......+.+++.+||+.+|++||++.++++.|+++
T Consensus       220 ~~~~~~~-------~~-----~~---------------~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         220 AVEDGYR-------LP-----PP---------------MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHcCCC-------CC-----CC---------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            1110000       00     00               01223467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.70  E-value=5e-18  Score=123.69  Aligned_cols=140  Identities=17%  Similarity=0.186  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......   ........++..|+|||.+.+.. ++.++|+||+||+++++++|+.||.+.....  ...
T Consensus       141 ~~kL~Dfg~a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~  215 (372)
T cd07853         141 VLKICDFGLARVEEPDE---SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLD  215 (372)
T ss_pred             CEEeccccceeecccCc---cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHH
Confidence            57999999998653321   11112345788999999987654 7889999999999999999999996542211  111


Q ss_pred             HHHhcCc----hhhhhhh---ccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALP----EQISEVL---DPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.....    ..+....   ...+........ .. .. ...........+.+|+.+||+.||.+|||+.++++.
T Consensus       216 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         216 LITDLLGTPSLEAMRSACEGARAHILRGPHKPP-SL-PV-LYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCC-ch-HH-hcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            1111000    0000000   000000000000 00 00 000001123456789999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.70  E-value=2e-17  Score=124.15  Aligned_cols=117  Identities=20%  Similarity=0.263  Sum_probs=79.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+.....  .......+|++.|+|||++.+..++.++|+|||||+++++++|+.||.....     ...
T Consensus       207 ~~kL~DFgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~  279 (478)
T PTZ00267        207 IIKLGDFGFSKQYSDSVS--LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REI  279 (478)
T ss_pred             cEEEEeCcCceecCCccc--cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence            479999999987643211  1122345689999999999888899999999999999999999999964211     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...        ........ .+               ......+.+++.+||+.||++||++++++..
T Consensus       280 ~~~--------~~~~~~~~-~~---------------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        280 MQQ--------VLYGKYDP-FP---------------CPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             HHH--------HHhCCCCC-CC---------------ccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            100        00000000 00               0112346789999999999999999998753

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.70  E-value=5.1e-17  Score=115.47  Aligned_cols=126  Identities=22%  Similarity=0.333  Sum_probs=83.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|++||.+.+..++.++|+|||||+++++++ |..||......  ....
T Consensus       178 ~~kL~dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~--~~~~  253 (307)
T cd05098         178 VMKIADFGLARDIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELFK  253 (307)
T ss_pred             cEEECCCcccccccccchh--hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHH
Confidence            4789999998765432111  11111223467999999888788999999999999999998 88888542110  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+..            ......+               ......+.+++.+||+.+|++|||+.++++.|+.+...-.
T Consensus       254 ~~~~------------~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~  304 (307)
T cd05098         254 LLKE------------GHRMDKP---------------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS  304 (307)
T ss_pred             HHHc------------CCCCCCC---------------CcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence            1100            0000000               0123456779999999999999999999999999887643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.70  E-value=1.4e-17  Score=119.23  Aligned_cols=114  Identities=17%  Similarity=0.224  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+|++.|+|||++.+..++.++|+||+||+++++++|+.||.+....  .....
T Consensus       133 ~~kl~DfG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~  206 (323)
T cd05571         133 HIKITDFGLCKEGISD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL  206 (323)
T ss_pred             CEEEeeCCCCcccccC----CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHH
Confidence            4799999998754221    11122356899999999998888999999999999999999999999652110  01110


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +.           ....  ..+               ......+.+++.+||+.||++||     ++.++++.
T Consensus       207 ~~-----------~~~~--~~p---------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         207 IL-----------MEEI--RFP---------------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             HH-----------cCCC--CCC---------------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            00           0000  000               01123456789999999999999     78888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.70  E-value=1.8e-17  Score=116.39  Aligned_cols=138  Identities=21%  Similarity=0.165  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......    ......++..|+|||.+.+.. ++.++|+||+||+++++++|..|+.........+..
T Consensus       137 ~~~l~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~  212 (284)
T cd07839         137 ELKLADFGLARAFGIPVR----CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  212 (284)
T ss_pred             cEEECccchhhccCCCCC----CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHH
Confidence            478999999986533211    112235678899999876654 788999999999999999998886432211111111


Q ss_pred             HHHhcCc----hhhhhhhccccc-cCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALP----EQISEVLDPLFV-TGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                       +.....    ..+.. +..... ...+......   ............+.+++.+||+.||.+|||+++++.
T Consensus       213 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         213 -IFRLLGTPTEESWPG-VSKLPDYKPYPMYPATT---SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             -HHHHhCCCChHHhHH-hhhcccccccCCCCCcc---hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence             111000    00000 000000 0000000000   000011123345678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.70  E-value=3.9e-17  Score=114.71  Aligned_cols=120  Identities=23%  Similarity=0.384  Sum_probs=79.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|++||++.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       162 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~~~~  237 (283)
T cd05090         162 HVKISDLGLSREIYSADYY--RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--EVIE  237 (283)
T ss_pred             cEEeccccccccccCCcce--ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            4799999999865432111  11122335667999999887788999999999999999998 88888543110  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+...   .        .. ..+.               .....+.+++.+||+.||.+||++.++++.|.+
T Consensus       238 ~~~~~---~--------~~-~~~~---------------~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         238 MVRKR---Q--------LL-PCSE---------------DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHcC---C--------cC-CCCC---------------CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            11100   0        00 0000               112346778899999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.70  E-value=3e-17  Score=113.68  Aligned_cols=117  Identities=27%  Similarity=0.458  Sum_probs=77.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.++........   ......++..|+|||.+.+..++.++|+||||++++++++ |+.||.....  .....
T Consensus       138 ~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~  212 (256)
T cd05114         138 VVKVSDFGMTRYVLDDEYT---SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVE  212 (256)
T ss_pred             eEEECCCCCccccCCCcee---ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Confidence            4789999998765332111   1112234567999999887788999999999999999999 8889854311  01111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .+....         . .  ..+.               .....+.+++.+||+.+|++|||+.++++.|
T Consensus       213 ~i~~~~---------~-~--~~~~---------------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         213 MISRGF---------R-L--YRPK---------------LASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHCCC---------C-C--CCCC---------------CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            111000         0 0  0000               1123467899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=5e-17  Score=112.89  Aligned_cols=120  Identities=28%  Similarity=0.419  Sum_probs=79.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  . .......+..|++||+..+..++.++|+||||++++++++ |+.||.+....  ....
T Consensus       141 ~~~l~dfg~~~~~~~~~~--~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~  215 (261)
T cd05068         141 ICKVADFGLARVIKEDIY--E-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQ  215 (261)
T ss_pred             CEEECCcceEEEccCCcc--c-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            478999999987643211  0 1111123457999999888888999999999999999998 99998543111  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+..            .......               ......+.+++.+||+.+|++||++.++.+.|+++
T Consensus       216 ~~~~------------~~~~~~~---------------~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         216 QVDQ------------GYRMPCP---------------PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             HHHc------------CCCCCCC---------------CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            1100            0000000               01234467899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.7e-17  Score=118.27  Aligned_cols=113  Identities=20%  Similarity=0.290  Sum_probs=75.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|++.|+|||++.+..++.++|+||+||+++++++|+.||.+...     ...
T Consensus       131 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~  201 (312)
T cd05585         131 HIALCDFGLCKLNMKD----DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEM  201 (312)
T ss_pred             cEEEEECcccccCccC----CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHH
Confidence            4799999999764322    1112235689999999999888899999999999999999999999965311     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC---HHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD---ISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps---~~~v~~  148 (163)
                      ...        .......  .+               ......+.+++.+||+.||.+||+   +.+++.
T Consensus       202 ~~~--------~~~~~~~--~~---------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         202 YRK--------ILQEPLR--FP---------------DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHH--------HHcCCCC--CC---------------CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            110        0000000  00               011234567889999999999985   566554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.70  E-value=2.7e-17  Score=114.73  Aligned_cols=115  Identities=17%  Similarity=0.253  Sum_probs=74.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----CCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||+++......    .......|+..|++||++..     ..++.++|+|||||+++++++|+.||......  
T Consensus       149 ~~~l~Dfg~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~--  222 (272)
T cd06637         149 EVKLVDFGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--  222 (272)
T ss_pred             CEEEccCCCceeccccc----ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH--
Confidence            47899999987653321    11223467889999998752     34778899999999999999999998543111  


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                        ..... . ..   ..... .   ..               ......+.+|+.+||+.+|.+|||+.++++
T Consensus       223 --~~~~~-~-~~---~~~~~-~---~~---------------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         223 --RALFL-I-PR---NPAPR-L---KS---------------KKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             --HHHHH-H-hc---CCCCC-C---CC---------------CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence              00000 0 00   00000 0   00               011234678999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.70  E-value=4.7e-17  Score=113.35  Aligned_cols=122  Identities=23%  Similarity=0.428  Sum_probs=79.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||++......... .........+..|++||++.+..++.++|+||||++++++++ |..||......  ....
T Consensus       145 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~~  221 (268)
T cd05063         145 ECKVSDFGLSRVLEDDPEG-TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVMK  221 (268)
T ss_pred             cEEECCCccceeccccccc-ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHH
Confidence            4789999998765432111 111111123456999999887778999999999999999987 99998542110  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+...            ......               ......+.+++.+||+.+|++||++.+|++.|.++
T Consensus       222 ~i~~~------------~~~~~~---------------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         222 AINDG------------FRLPAP---------------MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHhcC------------CCCCCC---------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            11100            000000               01234467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.70  E-value=2.2e-17  Score=114.59  Aligned_cols=119  Identities=28%  Similarity=0.429  Sum_probs=80.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++.........    .....++..|++||......++.++|+||||++++++++ |+.||......  ....
T Consensus       142 ~~kl~d~g~~~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~  215 (261)
T cd05148         142 VCKVADFGLARLIKEDVYL----SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYD  215 (261)
T ss_pred             eEEEccccchhhcCCcccc----ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHH
Confidence            4689999999776432111    112235667999999887788899999999999999998 88998653211  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+....    .    .    ..+               ......+.+++.+||+.||.+|||+.++.+.|+++
T Consensus       216 ~~~~~~----~----~----~~~---------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         216 QITAGY----R----M----PCP---------------AKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHhCC----c----C----CCC---------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            110000    0    0    000               02234467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.69  E-value=4.3e-17  Score=113.58  Aligned_cols=119  Identities=24%  Similarity=0.373  Sum_probs=79.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||+++..........  .....++..|++||++.+..++.++|+||||++++++++ |..||......  ....
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~  224 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYRK--EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQ  224 (269)
T ss_pred             ceEECCccccccccccccccc--CcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHH
Confidence            578999999876543211111  112234678999999988889999999999999999998 99998543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+...          ...  ..+               ......+.+++.+||+.+|.+||++.++++.|.
T Consensus       225 ~~~~~----------~~~--~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         225 HVTAG----------GRL--QKP---------------ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHhcC----------Ccc--CCc---------------ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            11000          000  000               022345678999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=4.5e-17  Score=117.98  Aligned_cols=113  Identities=23%  Similarity=0.343  Sum_probs=78.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-Cc-cccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VS-TYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~-~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      ++||+|||++.....    ........+|++.|+|||++.+.. |. .++|+||+|++++.|++|..||++....  .+.
T Consensus       159 ~~Kl~DFG~s~~~~~----~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~--~l~  232 (370)
T KOG0583|consen  159 NLKLSDFGLSAISPG----EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP--NLY  232 (370)
T ss_pred             CEEEeccccccccCC----CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH--HHH
Confidence            689999999987631    122334578999999999998877 76 6789999999999999999999762111  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVV  147 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~  147 (163)
                      ..+.... -.....+                         . ...+..++.+|+..||.+|+|+.+++
T Consensus       233 ~ki~~~~-~~~p~~~-------------------------~-S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  233 RKIRKGE-FKIPSYL-------------------------L-SPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             HHHhcCC-ccCCCCc-------------------------C-CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            1111000 0000000                         0 23356788999999999999999998

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.69  E-value=3.2e-17  Score=114.70  Aligned_cols=119  Identities=27%  Similarity=0.347  Sum_probs=79.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......  .......++..|++||.+....++.++|+|||||+++++++ |..||......  ....
T Consensus       157 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~  232 (277)
T cd05032         157 TVKIGDFGMTRDIYETDYY--RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVLK  232 (277)
T ss_pred             CEEECCcccchhhccCccc--ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHHH
Confidence            4789999998865432111  11122345778999999887788999999999999999998 88888542111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+.           ...... .+.               .....+.+++.+||+.+|++|||+.+++..|+
T Consensus       233 ~~~-----------~~~~~~-~~~---------------~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         233 FVI-----------DGGHLD-LPE---------------NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHh-----------cCCCCC-CCC---------------CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            111           000000 000               11345678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.69  E-value=4.9e-17  Score=115.40  Aligned_cols=125  Identities=17%  Similarity=0.306  Sum_probs=82.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......  .......++..|++||.+.+..++.++|+||||++++|+++ |..||.+....  ....
T Consensus       147 ~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~  222 (303)
T cd05110         147 HVKITDFGLARLLEGDEKE--YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPD  222 (303)
T ss_pred             ceEEccccccccccCcccc--cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            4799999999876432111  11112334668999999888888999999999999999997 88888543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+...          ...  ..+.               .+...+..++..||..+|++||++.++++.|..+.+..
T Consensus       223 ~~~~~----------~~~--~~~~---------------~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~  272 (303)
T cd05110         223 LLEKG----------ERL--PQPP---------------ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP  272 (303)
T ss_pred             HHHCC----------CCC--CCCC---------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence            11100          000  0000               11223567889999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.69  E-value=1.5e-17  Score=116.39  Aligned_cols=66  Identities=32%  Similarity=0.404  Sum_probs=56.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .++|+|||+|+.....    .....+.|||+.|||||++....|+..+|.||+|++++||++|.+||.+.
T Consensus       163 Hi~LtDFgL~k~~~~~----~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~  228 (357)
T KOG0598|consen  163 HIKLTDFGLCKEDLKD----GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE  228 (357)
T ss_pred             cEEEeccccchhcccC----CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence            5799999999864322    22334579999999999999999999999999999999999999999764

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.69  E-value=2.9e-17  Score=115.35  Aligned_cols=142  Identities=18%  Similarity=0.225  Sum_probs=78.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||++..+....    .......++..|++||++.+. .++.++|+||||++++++++|..||....... ....
T Consensus       138 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~  212 (286)
T cd07846         138 VVKLCDFGFARTLAAPG----EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYH  212 (286)
T ss_pred             cEEEEeeeeeeeccCCc----cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHH
Confidence            47899999988654321    111224578899999988654 36788999999999999999998885432100 0000


Q ss_pred             HH--HhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FV--KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..  ............+.............................+.+++.+||+.+|++||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         213 IIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            00  001111111111100000000000000000000011123455788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.69  E-value=3.5e-17  Score=113.16  Aligned_cols=115  Identities=23%  Similarity=0.337  Sum_probs=78.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||+++.+.....    ......|+..|++||+..+..++.++|+||||++++++++|+.||......  .....
T Consensus       139 ~~~l~df~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~  212 (256)
T cd08529         139 NVKIGDLGVAKLLSDNTN----FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALILK  212 (256)
T ss_pred             CEEEcccccceeccCccc----hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            478999999887643211    112235788899999998888889999999999999999999999643210  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +..       ....+     ..               ......+.+++.+||+.+|++||++.++++.
T Consensus       213 ~~~-------~~~~~-----~~---------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         213 IIR-------GVFPP-----VS---------------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHc-------CCCCC-----Cc---------------cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            000       00000     00               0123346789999999999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.69  E-value=4.2e-17  Score=113.88  Aligned_cols=119  Identities=23%  Similarity=0.274  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||++......     ........+..|++||++....++.++|+||||++++++++ |..||.....     ..
T Consensus       150 ~~kl~dfgl~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~~  219 (270)
T cd05047         150 VAKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AE  219 (270)
T ss_pred             eEEECCCCCccccchh-----hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-----HH
Confidence            4789999998643211     01111223556999999877778899999999999999997 8999854211     11


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      ....         +........+               ......+.+++.+||+.+|.+|||+.+++..|..+.
T Consensus       220 ~~~~---------~~~~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         220 LYEK---------LPQGYRLEKP---------------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HHHH---------HhCCCCCCCC---------------CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            1100         0000000000               011234678999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.69  E-value=5.7e-17  Score=113.78  Aligned_cols=119  Identities=24%  Similarity=0.380  Sum_probs=78.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|++||.+.+..++.++|+|||||+++++++ |..||.......  ...
T Consensus       160 ~~kL~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~  235 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYY--RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIE  235 (280)
T ss_pred             CEEECCCCceeEcCCCcee--ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHH
Confidence            4799999998765322110  11112234677999999888889999999999999999998 888885432111  111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ......        ..    ..+               ......+.+++.+||+.||.+||++.+|.+.|+
T Consensus       236 ~~~~~~--------~~----~~~---------------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         236 CITQGR--------EL----ERP---------------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHcCc--------cC----CCC---------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            000000        00    000               011234678999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.69  E-value=4.2e-17  Score=114.51  Aligned_cols=143  Identities=15%  Similarity=0.168  Sum_probs=79.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchH-
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH-   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~-   79 (163)
                      .+||+|||++........    ......++..|++||++.+. .++.++|+||||++++++++|..||.+....+.... 
T Consensus       138 ~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~  213 (286)
T cd07847         138 QIKLCDFGFARILTGPGD----DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLI  213 (286)
T ss_pred             cEEECccccceecCCCcc----cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            478999999987643211    11223467889999987663 478899999999999999999999965432111000 


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...............+.............................+.+++.+||+.+|++|||+.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         214 RKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            000000111111111110000000000000000000111122455778999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.69  E-value=1.8e-17  Score=121.75  Aligned_cols=125  Identities=20%  Similarity=0.300  Sum_probs=85.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++....-    ........-...|+|||.+....|+.++|||||||++||+++ |..||.+....  ....
T Consensus       300 ~vKISDFGLs~~~~~~----~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~  373 (474)
T KOG0194|consen  300 VVKISDFGLSRAGSQY----VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKA  373 (474)
T ss_pred             eEEeCccccccCCcce----eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHH
Confidence            3699999999864311    111101123568999999988899999999999999999998 78899764221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+   ....++...+.                       ..+..+..++.+||..+|+.||||.++.+.|+.+.+...
T Consensus       374 kI---~~~~~r~~~~~-----------------------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  374 KI---VKNGYRMPIPS-----------------------KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             HH---HhcCccCCCCC-----------------------CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            11   01111111111                       223446678889999999999999999999999987755

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=4.2e-17  Score=119.63  Aligned_cols=68  Identities=22%  Similarity=0.261  Sum_probs=54.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.+.....  ........|+..|+|||++.+..++.++|+|||||+++++++|+.||.+.
T Consensus       223 ~~~l~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  290 (392)
T PHA03207        223 NAVLGDFGAACKLDAHPD--TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK  290 (392)
T ss_pred             CEEEccCccccccCcccc--cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence            478999999976643211  11122356899999999998888999999999999999999999999664

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.69  E-value=3.6e-17  Score=113.98  Aligned_cols=120  Identities=21%  Similarity=0.294  Sum_probs=78.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||.+.......   ........++..|+|||.+.+..++.++|+|||||+++++++ |..||.+....  ....
T Consensus       145 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~  219 (266)
T cd05064         145 VCKISGFRRLQEDKSEA---IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIK  219 (266)
T ss_pred             cEEECCCcccccccccc---hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHH
Confidence            47889999876532211   011112234578999999888889999999999999999775 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+.....            ...+               ......+.+++.+||+.+|++|||++++.+.|+++
T Consensus       220 ~~~~~~~------------~~~~---------------~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         220 AVEDGFR------------LPAP---------------RNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHCCCC------------CCCC---------------CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            1110000            0000               02234467789999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.68  E-value=8e-17  Score=112.37  Aligned_cols=123  Identities=19%  Similarity=0.332  Sum_probs=82.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++........ .  .....++..|+|||.+....++.++|+||||++++++++ |..||......  ....
T Consensus       145 ~~~l~d~g~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~  219 (270)
T cd05056         145 CVKLGDFGLSRYLEDESYY-K--ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--DVIG  219 (270)
T ss_pred             CeEEccCceeeecccccce-e--cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--HHHH
Confidence            4789999998865432111 1  111223467999999877778899999999999999886 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....          ..  ..+               ......+.+++.+||..+|++|||+.+++..|.++.++
T Consensus       220 ~~~~~~----------~~--~~~---------------~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         220 RIENGE----------RL--PMP---------------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             HHHcCC----------cC--CCC---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            110000          00  000               01223467799999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.68  E-value=7.8e-17  Score=111.85  Aligned_cols=119  Identities=24%  Similarity=0.406  Sum_probs=79.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||++..+......   ......++..|+|||.+.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       140 ~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~  214 (260)
T cd05070         140 VCKIADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLE  214 (260)
T ss_pred             eEEeCCceeeeeccCcccc---cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            4789999999876432111   1111234567999999877778899999999999999998 88888653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+.            .......+               ......+.+++.+||..+|++|||+.++...|+.
T Consensus       215 ~~~------------~~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         215 QVE------------RGYRMPCP---------------QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHH------------cCCCCCCC---------------CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            110            00000000               0122347789999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.68  E-value=8.5e-17  Score=114.18  Aligned_cols=122  Identities=23%  Similarity=0.300  Sum_probs=79.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......     ......++..|++||++.+..++.++|+||||++++++++ |..||......  ....
T Consensus       162 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~  234 (303)
T cd05088         162 VAKIADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYE  234 (303)
T ss_pred             cEEeCccccCcccchhh-----hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHH
Confidence            47899999986432110     0111223557999998877778899999999999999998 99998543111  0110


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ..    +.       . .....+               ......+.+++.+||+.+|++||++.+++..|..+.+.-
T Consensus       235 ~~----~~-------~-~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         235 KL----PQ-------G-YRLEKP---------------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             HH----hc-------C-CcCCCC---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            00    00       0 000000               011234678999999999999999999999988776543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.68  E-value=7.3e-17  Score=113.40  Aligned_cols=142  Identities=21%  Similarity=0.256  Sum_probs=81.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcc-hH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD-LH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~-~~   79 (163)
                      .+||+|||++........   .......++..|++||++... .++.++|+||||++++++++|..||......... ..
T Consensus       138 ~~kl~d~g~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~  214 (288)
T cd07833         138 VLKLCDFGFARALRARPA---SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLI  214 (288)
T ss_pred             CEEEEeeecccccCCCcc---ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            578999999887644311   112234578889999998877 6889999999999999999999998643211100 00


Q ss_pred             HHHHhcCchhhhhhhc--ccccc-CCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLD--PLFVT-GGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .......+......+.  +.... .......  ...............+.+++.+||+.+|++|||++++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         215 QKCLGPLPPSHQELFSSNPRFAGVAFPEPSQ--PESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHhCCCCHHHhhhcccCccccccccCCCCC--cHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            0000111111111110  00000 0000000  000000111122456788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.68  E-value=1.1e-16  Score=112.06  Aligned_cols=115  Identities=19%  Similarity=0.251  Sum_probs=78.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||++.......    .......++..|++||++.+..++.++|+||||++++++++|+.||.......  ....
T Consensus       139 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~  212 (277)
T cd06640         139 DVKLADFGVAGQLTDTQ----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--VLFL  212 (277)
T ss_pred             CEEEcccccceeccCCc----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--Hhhh
Confidence            47899999987654321    11122356788999999888788999999999999999999999986432110  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +            ...   ..+            .........+.+++.+||+.+|++||++.+++..
T Consensus       213 ~------------~~~---~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         213 I------------PKN---NPP------------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             h------------hcC---CCC------------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            0            000   000            0001234456789999999999999999999776

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.68  E-value=3.5e-17  Score=117.64  Aligned_cols=142  Identities=15%  Similarity=0.169  Sum_probs=80.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.................++..|++||.+.+ ..++.++|+||||++++++++|+.||.+.....  ...
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~--~~~  222 (334)
T cd07855         145 ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH--QLK  222 (334)
T ss_pred             cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH--HHH
Confidence            47899999997654321111111223467889999998765 347889999999999999999999996532110  011


Q ss_pred             HHHhcCchhhhhhhc----ccccc---CCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLD----PLFVT---GGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+...........++    ..+..   ..+......    ...........+.+++.+||+.+|++|||+++++..
T Consensus       223 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         223 LILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVP----WSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             HHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCC----HHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            111100000000000    00000   000000000    000111234567889999999999999999998763

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.68  E-value=6.6e-17  Score=112.68  Aligned_cols=117  Identities=18%  Similarity=0.261  Sum_probs=79.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++.......     ......|+..|++||.+.+..++.++|+||||++++++++|+.||.....     ...
T Consensus       152 ~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----~~~  221 (269)
T cd08528         152 KVTITDFGLAKQKQPES-----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----LSL  221 (269)
T ss_pred             cEEEecccceeeccccc-----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----HHH
Confidence            47899999998654321     12234578889999999887789999999999999999999999854211     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ....        .+.........               .....+.+++.+||+.||++||++.|+..+++
T Consensus       222 ~~~~--------~~~~~~~~~~~---------------~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         222 ATKI--------VEAVYEPLPEG---------------MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHH--------hhccCCcCCcc---------------cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            1000        00000000000               11234667889999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.68  E-value=7.2e-17  Score=113.44  Aligned_cols=133  Identities=19%  Similarity=0.251  Sum_probs=80.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+....... .......++..|+|||++.+..++.++|+||||+++++++++..|........   ...
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~---~~~  222 (284)
T cd05079         147 QVKIGDFGLTKAIETDKEYY-TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF---LKM  222 (284)
T ss_pred             CEEECCCccccccccCccce-eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh---hhh
Confidence            47899999998764321111 11122346677999999887788899999999999999999776543211100   000


Q ss_pred             HHhcC----chhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           82 VKNAL----PEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        82 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .....    .......+.........               ......+.+|+.+||+.+|++|||+.++++.|+.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         223 IGPTHGQMTVTRLVRVLEEGKRLPRP---------------PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             cccccccccHHHHHHHHHcCccCCCC---------------CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            00000    00000001000000000               01234578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.68  E-value=1.2e-16  Score=114.90  Aligned_cols=124  Identities=24%  Similarity=0.365  Sum_probs=82.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|++||++.+..++.++|+||||++++++++ |..||......  ....
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~  247 (334)
T cd05100         172 VMKIADFGLARDVHNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--ELFK  247 (334)
T ss_pred             cEEECCcccceeccccccc--ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            4789999999865432111  11112234567999999988888999999999999999998 78888543110  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.           ... ....+               ......+.+++.+||+.+|.+|||+.++++.|.++...
T Consensus       248 ~~~-----------~~~-~~~~~---------------~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         248 LLK-----------EGH-RMDKP---------------ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             HHH-----------cCC-CCCCC---------------CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence            000           000 00000               01233467899999999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.68  E-value=3.4e-17  Score=116.45  Aligned_cols=137  Identities=15%  Similarity=0.136  Sum_probs=78.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......    .......++..|+|||.+.+. .++.++|+||+|++++++++|+.||.+....+  ...
T Consensus       142 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~--~~~  215 (309)
T cd07872         142 ELKLADFGLARAKSVPT----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED--ELH  215 (309)
T ss_pred             CEEECccccceecCCCc----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHH
Confidence            47999999987643221    111224578899999987654 47889999999999999999999996542211  111


Q ss_pred             HHHhcC----chhhhhhhcccc--ccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNAL----PEQISEVLDPLF--VTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+....    ...+........  ....+......    ...........+.+++.+||+.||.+|||+.|+++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         216 LIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQP----LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             HHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCc----hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            111111    111111100000  00000000000    00001112334678999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.68  E-value=1.2e-16  Score=110.43  Aligned_cols=119  Identities=24%  Similarity=0.336  Sum_probs=76.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  .........+..|++||.+.+..++.++|+||||++++++++ |..||......  ... 
T Consensus       132 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~-  206 (252)
T cd05084         132 VLKISDFGMSREEEDGVY--ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTR-  206 (252)
T ss_pred             cEEECccccCcccccccc--cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHH-
Confidence            478999999876533211  000111122456999999888888999999999999999997 88888542111  000 


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                                 ..+........+               ......+.+++.+||+.+|++|||+.+++++|.
T Consensus       207 -----------~~~~~~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         207 -----------EAIEQGVRLPCP---------------ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             -----------HHHHcCCCCCCc---------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence                       001000000000               011335678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.68  E-value=8.4e-17  Score=111.40  Aligned_cols=121  Identities=21%  Similarity=0.364  Sum_probs=80.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......... .....++..|++||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~  211 (257)
T cd05040         135 KVKIGDFGLMRALPQNEDHYVM-EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILK  211 (257)
T ss_pred             EEEeccccccccccccccceec-ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            4789999999876543211111 112346778999999887788999999999999999998 99998543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+...        ... .  ..+               ......+.+++.+||+.+|++|||+.++++.|.
T Consensus       212 ~~~~~--------~~~-~--~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         212 KIDKE--------GER-L--ERP---------------EACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHhc--------CCc-C--CCC---------------ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            11000        000 0  000               011234678999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.68  E-value=8.5e-17  Score=115.66  Aligned_cols=63  Identities=27%  Similarity=0.466  Sum_probs=51.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||++......      ......|+..|+|||.+.+..++.++|+|||||+++++++|+.||..
T Consensus       142 ~~kL~Dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         142 EIKLCDFGVSGQLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             CEEEeeCCcchhhhhh------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            4799999998765321      11224578899999999887889999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.68  E-value=1e-16  Score=111.49  Aligned_cols=120  Identities=25%  Similarity=0.395  Sum_probs=80.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.++.+......   ......++..|++||+..+..++.++|+||||++++++++ |..||.+.....  ...
T Consensus       140 ~~~L~dfg~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~~~  214 (262)
T cd05071         140 VCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLD  214 (262)
T ss_pred             cEEeccCCceeeccccccc---cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--HHH
Confidence            4789999999866432111   1112235667999999887788999999999999999999 788885432110  000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+...            .....               .......+.+++.+||+.||++|||+.++++.|+..
T Consensus       215 ~~~~~------------~~~~~---------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         215 QVERG------------YRMPC---------------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHhcC------------CCCCC---------------ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            00000            00000               012234567899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.68  E-value=7.9e-17  Score=115.35  Aligned_cols=113  Identities=20%  Similarity=0.242  Sum_probs=76.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++||||||++++++++|+.||.....     ...
T Consensus       138 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~  208 (323)
T cd05584         138 HVKLTDFGLCKESIHE----GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKT  208 (323)
T ss_pred             CEEEeeCcCCeecccC----CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHH
Confidence            4799999998754222    1112234689999999999887888999999999999999999999965321     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~  148 (163)
                      ...        .......  .+.               .....+.+++.+||+.||++||     ++.++++
T Consensus       209 ~~~--------~~~~~~~--~~~---------------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         209 IDK--------ILKGKLN--LPP---------------YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHH--------HHcCCCC--CCC---------------CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            110        1110000  000               1123456899999999999999     7888766

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.68  E-value=4.6e-17  Score=115.18  Aligned_cols=117  Identities=17%  Similarity=0.217  Sum_probs=77.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.......    ......++..|++||.+.+..++.++|+||||++++++++|+.||....... .... 
T Consensus       154 ~~kl~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-~~~~-  227 (296)
T cd06654         154 SVKLTDFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYL-  227 (296)
T ss_pred             CEEECccccchhcccccc----ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-hHHH-
Confidence            478999999876533211    1122357889999999887778899999999999999999999996532211 0000 


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...   ..     .+.+. . +               ......+.+++.+||..+|+.|||+.++++.
T Consensus       228 ~~~---~~-----~~~~~-~-~---------------~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         228 IAT---NG-----TPELQ-N-P---------------EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             Hhc---CC-----CCCCC-C-c---------------cccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            000   00     00000 0 0               0112346678999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.68  E-value=5.6e-17  Score=113.72  Aligned_cols=136  Identities=21%  Similarity=0.287  Sum_probs=82.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||.+............ .....++..|++||.+.+..++.++|+||||++++++++|..|+.............
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~  225 (284)
T cd05038         147 LVKISDFGLAKVLPEDKDYYYV-KEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI  225 (284)
T ss_pred             CEEEcccccccccccCCcceec-cCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc
Confidence            4789999999876532111111 111234556999999887788899999999999999999998875432211000000


Q ss_pred             HHh-cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           82 VKN-ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        82 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ... .........+........+               ..+...+.+++.+||+.+|++|||+.+|+++|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         226 AQGQMIVTRLLELLKEGERLPRP---------------PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             ccccccHHHHHHHHHcCCcCCCC---------------ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            000 0000111111110000000               01224577899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=6.3e-17  Score=116.27  Aligned_cols=119  Identities=20%  Similarity=0.199  Sum_probs=78.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++....       ......|+..|+|||++.+..++.++|+||+||+++++++|..||.......  ....
T Consensus       139 ~~kL~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~  209 (333)
T cd05600         139 HIKLTDFGLSKGIVT-------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE--TWEN  209 (333)
T ss_pred             CEEEEeCcCCccccc-------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH--HHHH
Confidence            479999999976532       1223468999999999988889999999999999999999999996532111  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...     ...+........         .      ......+.+++.+||..+|.+||++.++++.
T Consensus       210 i~~~-----~~~~~~~~~~~~---------~------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         210 LKYW-----KETLQRPVYDDP---------R------FNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHhc-----cccccCCCCCcc---------c------cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            1000     000000000000         0      0123346778899999999999999999865

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.68  E-value=1.2e-16  Score=112.90  Aligned_cols=126  Identities=17%  Similarity=0.209  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh--CCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT--GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~--g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||++........  ........++..|+|||+..+..++.++|+||||++++++++  +..||......  ...
T Consensus       167 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~--~~~  242 (295)
T cd05097         167 TIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE--QVI  242 (295)
T ss_pred             cEEecccccccccccCcc--eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH--HHH
Confidence            479999999876532211  111112234678999999888889999999999999999988  55676542111  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ........    .. ........+.               .....+.+|+.+||+.||++|||+.+|++.|.
T Consensus       243 ~~~~~~~~----~~-~~~~~~~~~~---------------~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         243 ENTGEFFR----NQ-GRQIYLSQTP---------------LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHhhh----hc-cccccCCCCC---------------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            11000000    00 0000000000               11235788999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.68  E-value=3.4e-17  Score=115.23  Aligned_cols=119  Identities=21%  Similarity=0.328  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC---CCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS---RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~---~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++......     ......|+..|++||++...   .++.++|+||+|++++++++|+.||....    ..
T Consensus       146 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~  216 (288)
T cd06616         146 NIKLCDFGISGQLVDSI-----AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SV  216 (288)
T ss_pred             cEEEeecchhHHhccCC-----ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hH
Confidence            37899999987653321     11223578889999998765   58889999999999999999999986432    11


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...+.......     .+.+.....               ......+.+|+.+||+.+|++|||+.+|+..
T Consensus       217 ~~~~~~~~~~~-----~~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         217 FDQLTQVVKGD-----PPILSNSEE---------------REFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHHHhhhcCCC-----CCcCCCcCC---------------CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11111110000     000000000               0123457789999999999999999999764

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.68  E-value=1.2e-16  Score=112.06  Aligned_cols=136  Identities=15%  Similarity=0.116  Sum_probs=79.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+.....     .....++..|++||.+.. ..++.++|+||+||+++++++|..||......  ....
T Consensus       137 ~~kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--~~~~  209 (282)
T cd07831         137 ILKLADFGSCRGIYSKPP-----YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--DQIA  209 (282)
T ss_pred             CeEEEecccccccccCCC-----cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--HHHH
Confidence            479999999987643211     122356888999997654 34688899999999999999999999653221  1111


Q ss_pred             HHHhcC---chhhhhhhccc--cccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNAL---PEQISEVLDPL--FVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ......   ...+...+...  .....+......    ...........+.+++.+||+.+|++|||++++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         210 KIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTG----LRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHcCCCCHHHHHhhcccccccccCccccccc----HHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            111111   11111111100  000000000000    01111233566788999999999999999999876

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.67  E-value=8.8e-18  Score=118.95  Aligned_cols=65  Identities=31%  Similarity=0.512  Sum_probs=56.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+|+.+..+     ......||++.|||||++....|+.|+|+||+|+++|++++|+.||...
T Consensus       153 ~LKIADFGfAR~L~~~-----~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  153 VLKIADFGFARFLQPG-----SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             eEEecccchhhhCCch-----hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence            4799999999988542     3334578999999999999899999999999999999999999999753

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.67  E-value=7.1e-17  Score=111.70  Aligned_cols=119  Identities=23%  Similarity=0.400  Sum_probs=80.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.++.......  ........++..|++||......++.++|+||+|++++++++ |..||......  ....
T Consensus       143 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~  218 (262)
T cd00192         143 VVKISDFGLSRDVYDDDY--YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVLE  218 (262)
T ss_pred             cEEEcccccccccccccc--cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            478999999987654321  111223346778999999887788999999999999999998 68898654111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+.           ..... ..+               ......+.+++.+||..+|++|||+.++++.|+
T Consensus       219 ~~~-----------~~~~~-~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         219 YLR-----------KGYRL-PKP---------------EYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHH-----------cCCCC-CCC---------------ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            110           00000 000               012345778999999999999999999998873

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.67  E-value=7.7e-17  Score=118.43  Aligned_cols=123  Identities=26%  Similarity=0.310  Sum_probs=81.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|++||.+.+..++.++|+||||++++|+++ |..||....... ....
T Consensus       277 ~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~-~~~~  353 (401)
T cd05107         277 LVKICDFGLARDIMRDSNY--ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE-QFYN  353 (401)
T ss_pred             EEEEEecCcceeccccccc--ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH-HHHH
Confidence            4789999999865332111  11112346778999999988788999999999999999998 888885432111 0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .+.....            ...+               ......+.+|+.+||+.+|.+||++++|++.|+.+.
T Consensus       354 ~~~~~~~------------~~~p---------------~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         354 AIKRGYR------------MAKP---------------AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHcCCC------------CCCC---------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            1110000            0000               011234678999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.67  E-value=8.5e-17  Score=115.43  Aligned_cols=114  Identities=18%  Similarity=0.249  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|++.|+|||++.+..++.++|+||+||+++++++|+.||.+...     ...
T Consensus       133 ~~kL~DfG~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~  203 (328)
T cd05593         133 HIKITDFGLCKEGITD----AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKL  203 (328)
T ss_pred             cEEEecCcCCccCCCc----ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHH
Confidence            4799999998754221    1112234689999999999888899999999999999999999999964311     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      ........      ..+..                   .....+.+++.+||+.||++|+     ++.++++.
T Consensus       204 ~~~~~~~~------~~~p~-------------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         204 FELILMED------IKFPR-------------------TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHhccCC------ccCCC-------------------CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            10000000      00000                   1123456788999999999997     88888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.67  E-value=9.8e-17  Score=113.26  Aligned_cols=126  Identities=15%  Similarity=0.203  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh--CCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT--GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~--g~~p~~~~~~~~~~~~   79 (163)
                      .++|+|||+++........  .......++..|++||.+.+..++.++|+|||||+++++++  +..||......  ...
T Consensus       168 ~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~  243 (296)
T cd05051         168 TIKIADFGMSRNLYSSDYY--RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ--QVI  243 (296)
T ss_pred             ceEEccccceeecccCcce--eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH--HHH
Confidence            4789999998765332111  11122345678999999887788999999999999999987  66676432110  011


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ......+...     ........               .......+.+++.+||+.||++|||+.+|++.|+
T Consensus       244 ~~~~~~~~~~-----~~~~~~~~---------------~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         244 ENAGHFFRDD-----GRQIYLPR---------------PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHhccccc-----cccccCCC---------------ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            1110000000     00000000               0011245788999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.67  E-value=8.3e-17  Score=112.89  Aligned_cols=121  Identities=20%  Similarity=0.276  Sum_probs=78.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++......      ......|+..|++||++.+..++.++|+||||++++++++|+.||.............
T Consensus       133 ~~~l~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~  206 (279)
T cd06619         133 QVKLCDFGVSTQLVNS------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPL  206 (279)
T ss_pred             CEEEeeCCcceecccc------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchH
Confidence            4789999998765332      1122467889999999988888999999999999999999999996543221110000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                            .......+... .....              ......+.+++.+||+.+|++||+++++++.
T Consensus       207 ------~~~~~~~~~~~-~~~~~--------------~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         207 ------QLLQCIVDEDP-PVLPV--------------GQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             ------HHHHHHhccCC-CCCCC--------------CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                  00000000000 00000              0112346788999999999999999999765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.67  E-value=3.1e-17  Score=113.38  Aligned_cols=116  Identities=21%  Similarity=0.262  Sum_probs=77.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++........    ......++..|++||++.+..++.++|+||||++++++++|+.||..........  .
T Consensus       137 ~~~l~dfg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--~  210 (256)
T cd06612         137 QAKLADFGVSGQLTDTMA----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--M  210 (256)
T ss_pred             cEEEcccccchhcccCcc----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--h
Confidence            478999999887643211    1122347788999999888788899999999999999999999986532211000  0


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..            ........             ........+.+++.+||+.||++|||+.+++.
T Consensus       211 ~~------------~~~~~~~~-------------~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         211 IP------------NKPPPTLS-------------DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             hc------------cCCCCCCC-------------chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            00            00000000             00012234677899999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.67  E-value=2.9e-17  Score=114.40  Aligned_cols=120  Identities=17%  Similarity=0.226  Sum_probs=76.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.+....    .......|+..|++||.+.   ...++.++|+||+|++++++++|+.||..........
T Consensus       144 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~  219 (267)
T cd06646         144 DVKLADFGVAAKITATI----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF  219 (267)
T ss_pred             CEEECcCccceeecccc----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe
Confidence            47899999998664321    1112345788999999874   3347788999999999999999999985432111000


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                           .......   ..+....                 .......+.+++.+||+.+|++|||++++++.|
T Consensus       220 -----~~~~~~~---~~~~~~~-----------------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         220 -----LMSKSNF---QPPKLKD-----------------KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             -----eeecCCC---CCCCCcc-----------------ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence                 0000000   0000000                 001123567899999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.67  E-value=1.5e-16  Score=112.50  Aligned_cols=126  Identities=17%  Similarity=0.241  Sum_probs=77.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh--CCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT--GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~--g~~p~~~~~~~~~~~~   79 (163)
                      .++|+|||+++.+......  .......++..|++||......++.++|+|||||+++|+++  +..||......  ...
T Consensus       168 ~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~--~~~  243 (296)
T cd05095         168 TIKIADFGMSRNLYSGDYY--RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE--QVI  243 (296)
T ss_pred             CEEeccCcccccccCCcce--eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH--HHH
Confidence            4789999999865332111  01111233567999998877789999999999999999998  66777542111  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ......    ............ +               ..+...+.+++.+||+.||++|||+.+|.+.|+
T Consensus       244 ~~~~~~----~~~~~~~~~~~~-~---------------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         244 ENTGEF----FRDQGRQVYLPK-P---------------ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHH----HhhccccccCCC-C---------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            000000    000000000000 0               012345778999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=1e-16  Score=111.33  Aligned_cols=119  Identities=21%  Similarity=0.283  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||+++........ ........++..|+|||.+.+..++.++|+||+|++++++++|+.||......    ...
T Consensus       142 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~  216 (263)
T cd06625         142 NVKLGDFGASKRLQTICSS-GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAI  216 (263)
T ss_pred             CEEEeecccceeccccccc-cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHH
Confidence            4789999998765332110 11001234678899999998888899999999999999999999998543111    000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..... ...    ...+    +               ......+.+++.+||..+|.+|||+.++++.
T Consensus       217 ~~~~~-~~~----~~~~----~---------------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         217 FKIAT-QPT----NPQL----P---------------SHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHhc-cCC----CCCC----C---------------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            00000 000    0000    0               0122346778999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.67  E-value=8.7e-17  Score=113.22  Aligned_cols=119  Identities=25%  Similarity=0.379  Sum_probs=77.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||+++.......  .........+..|++||.+.+..++.++|+|||||+++++++ |..||.+....  ....
T Consensus       168 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~--~~~~  243 (288)
T cd05050         168 VVKIADFGLSRNIYSADY--YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE--EVIY  243 (288)
T ss_pred             ceEECccccceecccCcc--ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            478999999876532211  111112234567999999888889999999999999999997 77787543111  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+           .+........                .....+.+++.+||+.||++|||+.|+++.|+
T Consensus       244 ~~-----------~~~~~~~~~~----------------~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         244 YV-----------RDGNVLSCPD----------------NCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HH-----------hcCCCCCCCC----------------CCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            00           0000000000                11234678999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.67  E-value=9.1e-17  Score=114.71  Aligned_cols=113  Identities=21%  Similarity=0.318  Sum_probs=75.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......    ......+|+..|+|||++.+..++.++|+|||||+++++++|+.||.+....  .....
T Consensus       134 ~~kL~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--~~~~~  207 (316)
T cd05592         134 HIKIADFGMCKENMNGE----GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--ELFDS  207 (316)
T ss_pred             CEEEccCcCCeECCCCC----CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            47999999997643221    1122356899999999998888999999999999999999999999653211  01110


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH-HHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS-DVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~v~~  148 (163)
                      +...         .+.+    +.               .....+.+++.+||+.||++||++. ++++
T Consensus       208 i~~~---------~~~~----~~---------------~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         208 ILND---------RPHF----PR---------------WISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HHcC---------CCCC----CC---------------CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            0000         0000    00               1123356788999999999999975 4543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.67  E-value=9.2e-17  Score=115.04  Aligned_cols=113  Identities=19%  Similarity=0.217  Sum_probs=75.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||.+.+..++.++|+|||||+++++++|+.||.+....     ..
T Consensus       139 ~~kL~Dfg~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~  209 (324)
T cd05589         139 FVKIADFGLCKEGMGF----GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EV  209 (324)
T ss_pred             cEEeCcccCCccCCCC----CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HH
Confidence            4799999998753221    11123456899999999998888999999999999999999999999653211     10


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~  148 (163)
                      ...        .......  .+               ......+.+++.+||+.||++||     ++.++++
T Consensus       210 ~~~--------i~~~~~~--~p---------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         210 FDS--------IVNDEVR--YP---------------RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHH--------HHhCCCC--CC---------------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            000        0000000  00               01123356789999999999999     4666655

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.67  E-value=4.2e-17  Score=113.07  Aligned_cols=117  Identities=26%  Similarity=0.431  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.++....+...   ......++..|++||...+..++.++|+||||++++++++ |..||......  ....
T Consensus       138 ~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~  212 (256)
T cd05113         138 CVKVSDFGLSRYVLDDEYT---SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVE  212 (256)
T ss_pred             CEEECCCccceecCCCcee---ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHH
Confidence            4799999998765332110   1111234567999999887788999999999999999998 88888543211  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .+..           ... ...+.               .....+.+++.+||+.+|.+|||+.+++..|
T Consensus       213 ~~~~-----------~~~-~~~~~---------------~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         213 KVSQ-----------GLR-LYRPH---------------LASEKVYAIMYSCWHEKAEERPTFQQLLSSI  255 (256)
T ss_pred             HHhc-----------CCC-CCCCC---------------CCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence            1100           000 00000               1124467899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=8.7e-17  Score=112.40  Aligned_cols=116  Identities=20%  Similarity=0.308  Sum_probs=78.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||+++.+....    .......++..|++||++.+..++.++|+||||++++++++|+.||......  .....
T Consensus       136 ~~~l~d~g~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~~~~~  209 (274)
T cd06609         136 DVKLADFGVSGQLTSTM----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--RVLFL  209 (274)
T ss_pred             CEEEcccccceeecccc----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--HHHHH
Confidence            47899999998764321    1122345788899999998878999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...        ..+.+...                  .....+.+++.+||..+|++|||++++++.
T Consensus       210 ~~~~--------~~~~~~~~------------------~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         210 IPKN--------NPPSLEGN------------------KFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             hhhc--------CCCCCccc------------------ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            1000        00000000                  012346678899999999999999999763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.67  E-value=4.6e-17  Score=116.87  Aligned_cols=65  Identities=22%  Similarity=0.362  Sum_probs=52.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+|||||+++++++|+.||..
T Consensus       134 ~~kL~DfG~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~  198 (329)
T cd05618         134 HIKLTDYGMCKEGLRP----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             CEEEeeCCccccccCC----CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence            4799999998753221    1112235689999999999888899999999999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.67  E-value=9.3e-17  Score=112.80  Aligned_cols=133  Identities=23%  Similarity=0.304  Sum_probs=80.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.......... ......++..|++||.+.+..++.++|+||||++++|++++..++.....   .....
T Consensus       146 ~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~  221 (284)
T cd05081         146 RVKIGDFGLTKVLPQDKEYYK-VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFMRM  221 (284)
T ss_pred             eEEECCCcccccccCCCccee-ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhhhh
Confidence            478999999987643311111 11112234569999998887889999999999999999998766532110   00000


Q ss_pred             HHhcCc-----hhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           82 VKNALP-----EQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        82 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ......     ..+.+.+........               .......+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         222 MGNDKQGQMIVYHLIELLKNNGRLPA---------------PPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             cccccccccchHHHHHHHhcCCcCCC---------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            000000     001111111000000               002234577899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.67  E-value=1.4e-16  Score=109.93  Aligned_cols=119  Identities=26%  Similarity=0.383  Sum_probs=77.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|++||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       131 ~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~  206 (251)
T cd05041         131 VLKISDFGMSREEEGGIYT--VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRE  206 (251)
T ss_pred             cEEEeeccccccccCCcce--eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHH
Confidence            4789999998765422111  00011223556999999887788999999999999999998 78888543211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+            ........+               ......+.+++.+||+.+|.+|||+.++++.|.
T Consensus       207 ~~------------~~~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         207 RI------------ESGYRMPAP---------------QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HH------------hcCCCCCCC---------------ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            11            000000000               012345788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.67  E-value=8.4e-17  Score=112.91  Aligned_cols=115  Identities=17%  Similarity=0.246  Sum_probs=75.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .++|+|||++.......    .......|+..|+|||.+.     ...++.++|+||||++++++++|..||....... 
T Consensus       159 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~-  233 (282)
T cd06636         159 EVKLVDFGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR-  233 (282)
T ss_pred             CEEEeeCcchhhhhccc----cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh-
Confidence            47899999987653221    1122345788999999875     2347788999999999999999999986432110 


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                       ....+...        ..+.+.                  .......+.+++.+||+.||.+|||+.++++
T Consensus       234 -~~~~~~~~--------~~~~~~------------------~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         234 -ALFLIPRN--------PPPKLK------------------SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             -hhhhHhhC--------CCCCCc------------------ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence             00000000        000000                  0012345788999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.67  E-value=6.9e-17  Score=115.41  Aligned_cols=114  Identities=18%  Similarity=0.217  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+|+..|+|||++.+..++.++|+||+||+++++++|+.||......  .....
T Consensus       134 ~~kl~Dfg~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--~~~~~  207 (318)
T cd05570         134 HIKIADFGMCKEGILG----GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--ELFQS  207 (318)
T ss_pred             cEEecccCCCeecCcC----CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--HHHHH
Confidence            4789999998753221    11122346889999999998888999999999999999999999999653211  01000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH-----HHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI-----SDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~v~~~  149 (163)
                      +           ......  .+               ......+.+++.+||+.||++|||+     .++++.
T Consensus       208 i-----------~~~~~~--~~---------------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         208 I-----------LEDEVR--YP---------------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             H-----------HcCCCC--CC---------------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            0           000000  00               0112346789999999999999999     777653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.67  E-value=7.6e-17  Score=116.73  Aligned_cols=64  Identities=25%  Similarity=0.264  Sum_probs=51.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.......     .....++..|++||.+.+..++.++|+|||||+++++++|+.||..
T Consensus       156 ~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~  219 (353)
T cd07850         156 TLKILDFGLARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG  219 (353)
T ss_pred             CEEEccCccceeCCCCCC-----CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence            479999999987543211     1223578889999999888899999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=6.5e-17  Score=120.91  Aligned_cols=117  Identities=17%  Similarity=0.261  Sum_probs=81.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCC-----CCCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYG-----MGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~-----~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .++++|||++-.....    ......++||++|||||++     ...+|+.++||||||+.+.||..+.+|.....+...
T Consensus       168 dirLADFGVSAKn~~t----~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV  243 (1187)
T KOG0579|consen  168 DIRLADFGVSAKNKST----RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV  243 (1187)
T ss_pred             cEeeecccccccchhH----HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH
Confidence            3689999998654221    2223457899999999986     345699999999999999999999999866533211


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                          .+ ..-....+.++.                      .+.+...+-+|+.+||..||..||+++++++.
T Consensus       244 ----ll-KiaKSePPTLlq----------------------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  244 ----LL-KIAKSEPPTLLQ----------------------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             ----HH-HHhhcCCCcccC----------------------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence                11 100011111111                      12445567889999999999999999999864

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.67  E-value=1.6e-16  Score=110.28  Aligned_cols=119  Identities=24%  Similarity=0.389  Sum_probs=79.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||+++....+...   ......++..|++||...+..++.++|+||||++++++++ |..||.+.....  ...
T Consensus       140 ~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~  214 (260)
T cd05069         140 VCKIADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLE  214 (260)
T ss_pred             eEEECCCccceEccCCccc---ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH
Confidence            4789999999765432110   1111234667999999887788999999999999999998 888986532111  011


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+....        ..    ..+               ......+.+++.+||+.||.+||++.++.+.|++
T Consensus       215 ~~~~~~--------~~----~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         215 QVERGY--------RM----PCP---------------QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHcCC--------CC----CCC---------------cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            110000        00    000               0123446789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.67  E-value=1.5e-16  Score=110.20  Aligned_cols=116  Identities=27%  Similarity=0.377  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.++.......       ...++..|++||.+....++.++|+||||++++++++ |..||......  .+..
T Consensus       140 ~~~l~d~g~~~~~~~~~~-------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~  210 (256)
T cd05039         140 VAKVSDFGLAKEASQGQD-------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVP  210 (256)
T ss_pred             CEEEcccccccccccccc-------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            478999999987632211       1234567999999887788899999999999999997 88888543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+.            .......+.               .....+.+++.+||..+|++|||++++++.|+++
T Consensus       211 ~~~------------~~~~~~~~~---------------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         211 HVE------------KGYRMEAPE---------------GCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHh------------cCCCCCCcc---------------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            110            000000000               1124467899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=1.7e-16  Score=115.17  Aligned_cols=62  Identities=29%  Similarity=0.457  Sum_probs=48.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPT   68 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~   68 (163)
                      .+||+|||+++.....     .......|+..|+|||++.+..++.++|+|||||+++|++++..++
T Consensus       195 ~~kl~DfG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        195 QVCIGDLGAAQFPVVA-----PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             CEEEecCccccccccC-----cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            4789999998753221     1112346899999999998888999999999999999999855443

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.67  E-value=1.2e-17  Score=131.92  Aligned_cols=120  Identities=24%  Similarity=0.324  Sum_probs=81.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC---CccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR---VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~---~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+|++|||.|+.+..+............||+-|||||++.+..   -..+.||||+|||+.||++|+.||.... .+...
T Consensus      1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d-ne~aI 1450 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD-NEWAI 1450 (1509)
T ss_pred             cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc-chhHH
Confidence            3799999999988665322233445678999999999987644   4577899999999999999999996532 11111


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      -..+.....++.++                           .......+|+.+||..||+.|-++.|+++.
T Consensus      1451 My~V~~gh~Pq~P~---------------------------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1451 MYHVAAGHKPQIPE---------------------------RLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HhHHhccCCCCCch---------------------------hhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            11111111111111                           112234568889999999999999888764

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.67  E-value=1e-16  Score=113.73  Aligned_cols=70  Identities=24%  Similarity=0.319  Sum_probs=51.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||++..+...............++..|+|||.+.+.. ++.++|+||||++++++++|..||...
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~  227 (310)
T cd07865         157 ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN  227 (310)
T ss_pred             cEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            4789999999876432111111122345678899999876654 678899999999999999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.67  E-value=7.4e-17  Score=113.24  Aligned_cols=117  Identities=17%  Similarity=0.229  Sum_probs=74.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||++.......    .......++..|++||++.     +..++.++|+|||||+++++++|+.||....... 
T Consensus       141 ~~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-  215 (282)
T cd06643         141 DIKLADFGVSAKNTRTI----QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-  215 (282)
T ss_pred             CEEEccccccccccccc----cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-
Confidence            47899999987653221    1112345788999999874     3347788999999999999999999986532110 


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                       ........   .     .+...  .+               ......+.+++.+||+.||++|||+.++++.
T Consensus       216 -~~~~~~~~---~-----~~~~~--~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         216 -VLLKIAKS---E-----PPTLA--QP---------------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             -HHHHHhhc---C-----CCCCC--Cc---------------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             00000000   0     00000  00               0112346789999999999999999998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.67  E-value=8.6e-17  Score=111.45  Aligned_cols=117  Identities=30%  Similarity=0.451  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......++..|++||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       138 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~  212 (256)
T cd05059         138 VVKVSDFGLARYVLDDQYT---SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVE  212 (256)
T ss_pred             cEEECCcccceeccccccc---ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHH
Confidence            4789999998765432111   0111123457999999888888999999999999999998 78888643211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .+....        ..    ..+               ......+.+++.+||..+|++|||+.++++.|
T Consensus       213 ~~~~~~--------~~----~~~---------------~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         213 SVSAGY--------RL----YRP---------------KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHcCC--------cC----CCC---------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            111000        00    000               01233577899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.67  E-value=1.1e-16  Score=111.11  Aligned_cols=119  Identities=23%  Similarity=0.344  Sum_probs=79.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||++.........   ......++..|++||++....++.++|+||||++++++++ |+.||.+....  ....
T Consensus       140 ~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~  214 (260)
T cd05067         140 CCKIADFGLARLIEDNEYT---AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQ  214 (260)
T ss_pred             CEEEccCcceeecCCCCcc---cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHH
Confidence            4789999998766422110   1112234668999999887788899999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .......        .    ..+               ......+.+++.+||+.+|++|||++++...|+.
T Consensus       215 ~~~~~~~--------~----~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         215 NLERGYR--------M----PRP---------------DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHcCCC--------C----CCC---------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            1100000        0    000               0112347889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=2.2e-16  Score=119.09  Aligned_cols=63  Identities=25%  Similarity=0.388  Sum_probs=49.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRP   67 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p   67 (163)
                      .+||+|||+++.+....   ........|+..|++||++.+..++.++|||||||+++|++++..+
T Consensus       305 ~vkL~DFGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~  367 (501)
T PHA03210        305 KIVLGDFGTAMPFEKER---EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC  367 (501)
T ss_pred             CEEEEeCCCceecCccc---ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            47999999998764321   1112235689999999999888899999999999999999998754

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.66  E-value=1.1e-16  Score=115.48  Aligned_cols=124  Identities=20%  Similarity=0.320  Sum_probs=81.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|++||.+.+..++.++|+||||++++++++ |..||....... ....
T Consensus       217 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~  293 (343)
T cd05103         217 VVKICDFGLARDIYKDPDY--VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR  293 (343)
T ss_pred             cEEEEecccccccccCcch--hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHH
Confidence            4799999998865322111  11111234567999999888788999999999999999997 888885532110 0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+...            .....+.               .....+.+++..||+.||++|||+.+|++.|+.+..
T Consensus       294 ~~~~~------------~~~~~~~---------------~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         294 RLKEG------------TRMRAPD---------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             HHhcc------------CCCCCCC---------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            00000            0000000               011246788999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.66  E-value=2.4e-16  Score=110.51  Aligned_cols=124  Identities=19%  Similarity=0.306  Sum_probs=82.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++..........  .....++..|++||......++.++|+||||++++|+++ |+.||......  ....
T Consensus       147 ~~kL~dfg~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~  222 (279)
T cd05057         147 HVKITDFGLAKLLDVDEKEYH--AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPD  222 (279)
T ss_pred             eEEECCCcccccccCccccee--cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHH
Confidence            478999999987643211111  111223567999999877788999999999999999998 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+...            .....+.               .+...+..++.+||..+|+.|||+.++++.|+.+.+.
T Consensus       223 ~~~~~------------~~~~~~~---------------~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         223 LLEKG------------ERLPQPP---------------ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             HHhCC------------CCCCCCC---------------CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence            11100            0000000               1122356788999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.66  E-value=7e-17  Score=115.91  Aligned_cols=111  Identities=22%  Similarity=0.251  Sum_probs=75.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....       .....|++.|+|||++.+..++.++|+|||||+++++++|..||.+....     ..
T Consensus       156 ~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~  223 (329)
T PTZ00263        156 HVKVTDFGFAKKVPDR-------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-----RI  223 (329)
T ss_pred             CEEEeeccCceEcCCC-------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-----HH
Confidence            4799999999865332       12246899999999998888899999999999999999999999653110     00


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~~  149 (163)
                      ..        ........  .+.               .....+.+|+.+||+.||.+|++     +++++..
T Consensus       224 ~~--------~i~~~~~~--~p~---------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        224 YE--------KILAGRLK--FPN---------------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             HH--------HHhcCCcC--CCC---------------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            00        00010000  000               01123567999999999999997     5777643

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=6.7e-17  Score=119.80  Aligned_cols=112  Identities=21%  Similarity=0.276  Sum_probs=80.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .||++|||.+....        +...++||++|||||++..   +.|+.++||||+||...|+..+++|+.+.+....-+
T Consensus       164 ~VKLaDFGSAsi~~--------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY  235 (948)
T KOG0577|consen  164 LVKLADFGSASIMA--------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY  235 (948)
T ss_pred             eeeeccccchhhcC--------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH
Confidence            47999999987642        2345789999999998753   569999999999999999999999987764432111


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .  +...-    ...+.                      ...+...|..|+..||+.-|.+|||.++++..
T Consensus       236 H--IAQNe----sPtLq----------------------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  236 H--IAQNE----SPTLQ----------------------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             H--HHhcC----CCCCC----------------------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            1  11100    00010                      11445557778889999999999999998764

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.66  E-value=5.5e-17  Score=113.75  Aligned_cols=116  Identities=18%  Similarity=0.198  Sum_probs=76.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......     ......|+..|+|||++.+..++.++|+||+||+++++++|+.||........ ....
T Consensus       133 ~~~l~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~  206 (277)
T cd05607         133 NCRLSDLGLAVELKDGK-----TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEEL  206 (277)
T ss_pred             CEEEeeceeeeecCCCc-----eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHH
Confidence            47899999987664321     11224578899999999888899999999999999999999999865321110 0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVV  147 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~  147 (163)
                      ..        ......+....                ......+.+++..||+.||.+||+++|++
T Consensus       207 ~~--------~~~~~~~~~~~----------------~~~~~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         207 KR--------RTLEDEVKFEH----------------QNFTEESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             HH--------Hhhcccccccc----------------ccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence            00        01111000000                01123357899999999999999997655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.66  E-value=9.9e-17  Score=112.34  Aligned_cols=115  Identities=22%  Similarity=0.334  Sum_probs=77.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||++..+....    .......++..|++||++.+..++.++|+||||++++++++|..|+.......  ....
T Consensus       139 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~  212 (277)
T cd06642         139 DVKLADFGVAGQLTDTQ----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFL  212 (277)
T ss_pred             CEEEccccccccccCcc----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhh
Confidence            47899999987654321    11122357888999999988788899999999999999999999986432111  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +    ....    .+.+    .               ......+.+++.+||+.+|++|||+.++++.
T Consensus       213 ~----~~~~----~~~~----~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         213 I----PKNS----PPTL----E---------------GQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             h----hcCC----CCCC----C---------------cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            0    0000    0000    0               0123346788999999999999999999874

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.66  E-value=1.8e-16  Score=110.13  Aligned_cols=119  Identities=23%  Similarity=0.363  Sum_probs=79.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.+.........   ......++..|++||++....++.++|+||||++++++++ |..||......  ....
T Consensus       140 ~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~  214 (260)
T cd05073         140 VCKIADFGLARVIEDNEYT---AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIR  214 (260)
T ss_pred             cEEECCCcceeeccCCCcc---cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            4789999998765432111   1112234567999999987778899999999999999998 89998643110  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+.....            ....               ......+.+++.+||+.+|++||++.+++..|+.
T Consensus       215 ~~~~~~~------------~~~~---------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         215 ALERGYR------------MPRP---------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHhCCCC------------CCCc---------------ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            1110000            0000               0123447789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.66  E-value=9.2e-17  Score=114.89  Aligned_cols=108  Identities=21%  Similarity=0.228  Sum_probs=73.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|++.|+|||++.+..++.++|+||+||+++++++|+.||......  .....
T Consensus       134 ~~kL~DfG~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~~~~  207 (320)
T cd05590         134 HCKLADFGMCKEGIFN----GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--DLFEA  207 (320)
T ss_pred             cEEEeeCCCCeecCcC----CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHH
Confidence            4799999998754221    11122346899999999998888899999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                      +           ......  .+.               .....+.+++.+||+.||.+|+++
T Consensus       208 i-----------~~~~~~--~~~---------------~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         208 I-----------LNDEVV--YPT---------------WLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             H-----------hcCCCC--CCC---------------CCCHHHHHHHHHHcccCHHHCCCC
Confidence            1           000000  000               112335678899999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.66  E-value=1.3e-16  Score=114.22  Aligned_cols=114  Identities=18%  Similarity=0.234  Sum_probs=76.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+|||||+++++++|+.||......  .....
T Consensus       133 ~~kL~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~~  206 (323)
T cd05595         133 HIKITDFGLCKEGISD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL  206 (323)
T ss_pred             CEEecccHHhccccCC----CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4799999998754221    11112346899999999998888999999999999999999999999643111  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +           ......  .+.               .....+.+++.+||+.||.+|+     ++.++++.
T Consensus       207 ~-----------~~~~~~--~p~---------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         207 I-----------LMEEIR--FPR---------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             H-----------hcCCCC--CCC---------------CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            0           000000  000               1123456789999999999998     78887653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.66  E-value=9.1e-17  Score=113.71  Aligned_cols=117  Identities=16%  Similarity=0.213  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++........    ......++..|++||.+.+..++.++|+||||++++++++|+.||....... ... .
T Consensus       153 ~~kl~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-~~~-~  226 (296)
T cd06655         153 SVKLTDFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-ALY-L  226 (296)
T ss_pred             CEEEccCccchhcccccc----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHH-H
Confidence            478999999876543211    1122357889999999888778899999999999999999999996532110 000 0


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +.....        +.+. . +               ......+.+++.+||..||.+|||+.++++.
T Consensus       227 ~~~~~~--------~~~~-~-~---------------~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         227 IATNGT--------PELQ-N-P---------------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             HHhcCC--------cccC-C-c---------------ccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            000000        0000 0 0               0112345678999999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.66  E-value=1.3e-16  Score=111.41  Aligned_cols=121  Identities=20%  Similarity=0.312  Sum_probs=80.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++....+....  ......++..|++||.+.+..++.++|+||||++++++++ |+.||.....  .....
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~  226 (273)
T cd05074         151 TVCVADFGLSKKIYSGDYYR--QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYN  226 (273)
T ss_pred             CEEECcccccccccCCccee--cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHH
Confidence            57899999988654321110  1112234567899999887778899999999999999998 8888854311  11111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+....          .. ...                ......+.+++.+||+.+|++|||+.+++..|+++
T Consensus       227 ~~~~~~----------~~-~~~----------------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         227 YLIKGN----------RL-KQP----------------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHcCC----------cC-CCC----------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            111000          00 000                01234578899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.66  E-value=9.1e-17  Score=114.92  Aligned_cols=114  Identities=18%  Similarity=0.219  Sum_probs=76.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+||+||+++++++|+.||......  .....
T Consensus       134 ~~kL~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--~~~~~  207 (321)
T cd05591         134 HCKLADFGMCKEGILN----GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--DLFES  207 (321)
T ss_pred             CEEEeecccceecccC----CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--HHHHH
Confidence            4799999998754321    11122346899999999998888999999999999999999999999653211  11110


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-------CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-------DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-------s~~~v~~~  149 (163)
                      +           ......  .+.               .....+.+++.+||+.||++|+       ++.++++.
T Consensus       208 i-----------~~~~~~--~p~---------------~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         208 I-----------LHDDVL--YPV---------------WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             H-----------HcCCCC--CCC---------------CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            0           000000  000               1123457889999999999999       77777644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.66  E-value=1e-16  Score=114.71  Aligned_cols=108  Identities=18%  Similarity=0.229  Sum_probs=73.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|++.|+|||++.+..++.++|+|||||+++++++|+.||.+....  .....
T Consensus       139 ~~kL~DfG~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~  212 (323)
T cd05616         139 HIKIADFGMCKENMWD----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQS  212 (323)
T ss_pred             cEEEccCCCceecCCC----CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4799999998754221    11222356899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                      +..           ....  .+.               .....+.+++.+|++.||++|+++
T Consensus       213 i~~-----------~~~~--~p~---------------~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         213 IME-----------HNVA--YPK---------------SMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHh-----------CCCC--CCC---------------cCCHHHHHHHHHHcccCHHhcCCC
Confidence            110           0000  000               112345778999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.9e-16  Score=114.62  Aligned_cols=141  Identities=16%  Similarity=0.114  Sum_probs=93.5

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcccccc----Cc
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAE----GL   76 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~----~~   76 (163)
                      +++||+|||-|.+....       -+.-+-|..|++||++.+..|+..+||||++|+.+|+.||-..|+.....    +.
T Consensus       391 i~vKIaDlGNACW~~kh-------FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDE  463 (590)
T KOG1290|consen  391 IRVKIADLGNACWVHKH-------FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDE  463 (590)
T ss_pred             eeEEEeeccchhhhhhh-------hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccH
Confidence            46899999999876332       22334588999999999999999999999999999999998888653322    11


Q ss_pred             ---chHHHHHhcCch-------hhhhhhccc--cccCCCCCCCchhhhhhhH--hhHHHHHHHHHHHhhcCCCCcCCCCC
Q 031224           77 ---DLHNFVKNALPE-------QISEVLDPL--FVTGGEEGEGTAEEKLKQD--QVQESLATILKIGVACSVESPRERMD  142 (163)
Q Consensus        77 ---~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~dp~~Rps  142 (163)
                         .++..+...+|.       ..+++++..  +.+-..-....-...+..+  +.......+.+|+.-+|+.+|.+|||
T Consensus       464 DHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~t  543 (590)
T KOG1290|consen  464 DHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPT  543 (590)
T ss_pred             HHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcccccc
Confidence               112222222221       122333321  1111111122333444443  46677888999999999999999999


Q ss_pred             HHHHHH
Q 031224          143 ISDVVN  148 (163)
Q Consensus       143 ~~~v~~  148 (163)
                      |.+.++
T Consensus       544 A~~cl~  549 (590)
T KOG1290|consen  544 AAQCLK  549 (590)
T ss_pred             HHHHhc
Confidence            999875

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.66  E-value=1.1e-16  Score=110.79  Aligned_cols=117  Identities=28%  Similarity=0.469  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......   .......++..|++||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       138 ~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~  212 (256)
T cd05112         138 VVKVSDFGMTRFVLDDQY---TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVE  212 (256)
T ss_pred             eEEECCCcceeecccCcc---cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHH
Confidence            378999999876543211   11112234568999999887788899999999999999998 88888542111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .+..    ... ...+    .                  .....+.+|+.+||+.+|++|||+.++++.|
T Consensus       213 ~~~~----~~~-~~~~----~------------------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         213 TINA----GFR-LYKP----R------------------LASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHhC----CCC-CCCC----C------------------CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            1000    000 0000    0                  1123477899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.66  E-value=1.2e-16  Score=114.17  Aligned_cols=112  Identities=20%  Similarity=0.290  Sum_probs=74.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+||+||+++++++|+.||......  .....
T Consensus       134 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~  207 (316)
T cd05620         134 HIKIADFGMCKENVFG----DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFES  207 (316)
T ss_pred             CEEeCccCCCeecccC----CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4789999998743211    11223356899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH-HHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS-DVV  147 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~v~  147 (163)
                      +...         .+.+    +.               .....+.+++.+||+.||++|+++. +++
T Consensus       208 ~~~~---------~~~~----~~---------------~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         208 IRVD---------TPHY----PR---------------WITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHhC---------CCCC----CC---------------CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            1000         0000    00               0123356788999999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.66  E-value=1.2e-16  Score=112.13  Aligned_cols=118  Identities=16%  Similarity=0.255  Sum_probs=77.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+.....    ......|+..|+|||++.+..++.++|+||||++++++++|+.||....... .....
T Consensus       135 ~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~  209 (280)
T cd05608         135 NVRISDLGLAVELKDGQS----KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKEL  209 (280)
T ss_pred             CEEEeeCccceecCCCCc----cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHH
Confidence            478999999976543211    1123468889999999988889999999999999999999999996532111 00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      ...        ......  ..+               ......+.+++.+||+.||++||     +++++++.
T Consensus       210 ~~~--------~~~~~~--~~~---------------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         210 KQR--------ILNDSV--TYP---------------DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             HHh--------hcccCC--CCc---------------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            000        000000  000               01223466788999999999999     77777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.66  E-value=9e-17  Score=115.38  Aligned_cols=119  Identities=22%  Similarity=0.296  Sum_probs=76.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+.....   .......|+..|+|||++.+.. ++.++|||||||+++++++|+.||........ ...
T Consensus       143 ~~kl~DfG~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~  218 (332)
T cd05614         143 HVVLTDFGLSKEFLSEEK---ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSE  218 (332)
T ss_pred             CEEEeeCcCCccccccCC---CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHH
Confidence            479999999986533211   1122346899999999987654 78889999999999999999999964322110 111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      ......     . .++.+..                   .....+.+++.+||+.||++||     +++++++.
T Consensus       219 ~~~~~~-----~-~~~~~~~-------------------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         219 VSRRIL-----K-CDPPFPS-------------------FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             HHHHHh-----c-CCCCCCC-------------------CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            100000     0 0000000                   1123356789999999999999     67777653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.66  E-value=4.4e-16  Score=109.35  Aligned_cols=137  Identities=17%  Similarity=0.137  Sum_probs=79.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++.......     ......++..|++||.+.+..++.++|+||||++++++++|..||.+..... .....
T Consensus       145 ~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~  218 (287)
T cd07838         145 QVKIADFGLARIYSFEM-----ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKI  218 (287)
T ss_pred             CEEEeccCcceeccCCc-----ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHH
Confidence            47899999987764321     1112346778999999988888999999999999999999998886532111 11111


Q ss_pred             HHhcCchhhhhhhcccc--ccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLF--VTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .................  ......    ................+.+++.+||+.||++||++.+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         219 FDVIGLPSEEEWPRNVSLPRSSFPS----YTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HHHcCCCChHhcCCCcccchhhccc----ccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            11000000000000000  000000    0000001111233455678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=7.8e-17  Score=113.76  Aligned_cols=111  Identities=21%  Similarity=0.191  Sum_probs=76.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....       .....|++.|+|||++.+..++.++|+|||||+++++++|+.||.+....  .....
T Consensus       139 ~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~~~~~  209 (291)
T cd05612         139 HIKLTDFGFAKKLRDR-------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--GIYEK  209 (291)
T ss_pred             CEEEEecCcchhccCC-------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4799999999865321       11246889999999998888899999999999999999999999653211  01111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~~  149 (163)
                      +           ......  .+.               .....+.+++.+||+.||.+|++     ++++++.
T Consensus       210 i-----------~~~~~~--~~~---------------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         210 I-----------LAGKLE--FPR---------------HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             H-----------HhCCcC--CCc---------------cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            0           000000  000               11223567999999999999995     8888754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.66  E-value=8.2e-17  Score=119.94  Aligned_cols=66  Identities=24%  Similarity=0.367  Sum_probs=51.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTS   69 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~   69 (163)
                      .+||+|||+++.......  ........|+..|++||++.+..++.++|||||||+++|+++|..++.
T Consensus       298 ~vkL~DFGla~~~~~~~~--~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf  363 (461)
T PHA03211        298 DICLGDFGAACFARGSWS--TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF  363 (461)
T ss_pred             CEEEcccCCceecccccc--cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence            479999999987543211  111123468999999999988889999999999999999998876553

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.66  E-value=1.5e-16  Score=110.79  Aligned_cols=118  Identities=16%  Similarity=0.225  Sum_probs=74.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||++......    ........|+..|+|||++.   ...++.++|+||+||+++++++|..||........ .
T Consensus       144 ~~~l~dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~  218 (267)
T cd06645         144 HVKLADFGVSAQITAT----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-L  218 (267)
T ss_pred             CEEECcceeeeEccCc----ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-H
Confidence            4789999998765322    11122346888999999874   34578899999999999999999999854321110 0


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....    .   ....+......                 .....+.+++.+||+.+|++|||++++++
T Consensus       219 ~~~~~----~---~~~~~~~~~~~-----------------~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         219 FLMTK----S---NFQPPKLKDKM-----------------KWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             Hhhhc----c---CCCCCcccccC-----------------CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            00000    0   00000000000                 11234567999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.66  E-value=1.6e-16  Score=109.54  Aligned_cols=118  Identities=26%  Similarity=0.358  Sum_probs=77.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||++...........   ....++..|++||++....++.++|+||||++++++++ |..||......  ....
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~  205 (250)
T cd05085         131 VLKISDFGMSRQEDDGIYSSS---GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QARE  205 (250)
T ss_pred             eEEECCCccceeccccccccC---CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHH
Confidence            478999999876433211111   11233567999999887788899999999999999998 88898543111  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .+....        ..    ..+               ......+.+++.+||+.+|++|||+.++++.|.
T Consensus       206 ~~~~~~--------~~----~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         206 QVEKGY--------RM----SCP---------------QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHcCC--------CC----CCC---------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            110000        00    000               011345678999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.66  E-value=1e-16  Score=115.32  Aligned_cols=144  Identities=14%  Similarity=0.105  Sum_probs=80.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........|+..|+|||.+.+ ..++.++|+||+|++++++++|+.||.+....  ....
T Consensus       144 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~  220 (336)
T cd07849         144 DLKICDFGLARIADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLN  220 (336)
T ss_pred             CEEECcccceeeccccccc-cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence            4789999998765432111 112233467889999998655 45788999999999999999999999653210  0000


Q ss_pred             HHHhcC----chhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNAL----PEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ......    .+......+............ ................+.+++.+||+.||++|||+.++++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         221 LILGVLGTPSQEDLNCIISLRARNYIKSLPF-KPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHHHcCCCCHHHHHHhhchhhhhHHhhcCc-CCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000000    111111111000000000000 00000000011223457789999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.66  E-value=1.9e-16  Score=112.46  Aligned_cols=144  Identities=20%  Similarity=0.173  Sum_probs=79.0

Q ss_pred             ceeecccccccccCccccCC-------CcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSN-------QSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+|||+++.........       ........++..|+|||.+.+. .++.++|+||||++++++++|+.||.+...
T Consensus       153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~  232 (311)
T cd07866         153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD  232 (311)
T ss_pred             CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence            47899999998654321110       1111223567789999987654 478899999999999999999999865322


Q ss_pred             cCcchHHHHH--hcC-chhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           74 EGLDLHNFVK--NAL-PEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        74 ~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .. .......  ... +..+...  ..+............+.............+.+++.+||+.||.+|||+.+++.
T Consensus       233 ~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         233 ID-QLHLIFKLCGTPTEETWPGW--RSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HH-HHHHHHHHhCCCChhhchhh--hhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            11 0000000  000 0000000  00000000000000000001111122356788999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.66  E-value=1.7e-16  Score=109.98  Aligned_cols=115  Identities=19%  Similarity=0.221  Sum_probs=78.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+|++|||++........    ......++..|++||.+....++.++|+||||++++++++|+.||....  .......
T Consensus       148 ~~kl~d~g~~~~~~~~~~----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~  221 (265)
T cd08217         148 NVKLGDFGLAKILGHDSS----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASK  221 (265)
T ss_pred             CEEEecccccccccCCcc----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHH
Confidence            478999999987644311    1122457889999999888778899999999999999999999986532  1111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...           .. ...+               ......+.+++.+||+.+|++|||+.+|++.
T Consensus       222 ~~~~-----------~~-~~~~---------------~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         222 IKEG-----------KF-RRIP---------------YRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HhcC-----------CC-CCCc---------------cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            1100           00 0000               0123456789999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.65  E-value=1.6e-16  Score=111.84  Aligned_cols=116  Identities=22%  Similarity=0.341  Sum_probs=77.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++........     .....|+..|+|||++.+..++.++|+||+|++++++++|..||.......  ....
T Consensus       140 ~~~l~Dfg~~~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~  212 (285)
T cd05630         140 HIRISDLGLAVHVPEGQT-----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREE  212 (285)
T ss_pred             CEEEeeccceeecCCCcc-----ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHH
Confidence            478999999876543211     122368899999999988889999999999999999999999996532110  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~  148 (163)
                      ..... ....    ....                   ......+.+|+..||+.||.+|||     ++++++
T Consensus       213 ~~~~~-~~~~----~~~~-------------------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         213 VERLV-KEVQ----EEYS-------------------EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHhhh-hhhh----hhcC-------------------ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            00000 0000    0000                   011234678899999999999999     888876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.65  E-value=6.7e-17  Score=113.48  Aligned_cols=65  Identities=31%  Similarity=0.332  Sum_probs=49.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||++.......    .......++..|+|||.+.+. .++.++|+||||++++++++|+.||..
T Consensus       139 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~  204 (285)
T cd07861         139 VIKLADFGLARAFGIPV----RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHG  204 (285)
T ss_pred             cEEECcccceeecCCCc----ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            47899999987653221    111223567889999987654 478889999999999999999999965

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.65  E-value=1.9e-16  Score=109.58  Aligned_cols=114  Identities=18%  Similarity=0.235  Sum_probs=77.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......    .......++..|+|||+..+..++.++|+||+|++++++++|+.||.....     ...
T Consensus       140 ~~~l~df~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~  210 (257)
T cd08223         140 IIKVGDLGIARVLENQC----DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSL  210 (257)
T ss_pred             cEEEecccceEEecccC----CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHH
Confidence            47899999988664321    112234578889999999888888999999999999999999999854211     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...        ........ .+               ......+.+++.+||+.+|.+|||+.++++
T Consensus       211 ~~~--------~~~~~~~~-~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         211 VYR--------IIEGKLPP-MP---------------KDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHH--------HHhcCCCC-Cc---------------cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            000        00000000 00               012334678999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.65  E-value=2.3e-16  Score=109.76  Aligned_cols=118  Identities=19%  Similarity=0.294  Sum_probs=77.6

Q ss_pred             ceeecccccccccCccccC--CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRS--NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .++|+|||+++....+...  .........|+..|++||.+.+..++.++|+||+|++++++++|+.||......    .
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~  219 (267)
T cd06628         144 GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----Q  219 (267)
T ss_pred             CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----H
Confidence            4789999999876532110  011112234778899999988878889999999999999999999999653110    0


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      . +..     ......+.+..                   .....+..++.+||+.||.+||++.++++
T Consensus       220 ~-~~~-----~~~~~~~~~~~-------------------~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         220 A-IFK-----IGENASPEIPS-------------------NISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             H-HHH-----HhccCCCcCCc-------------------ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            0 000     00000000000                   12234677889999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.65  E-value=8e-18  Score=115.87  Aligned_cols=117  Identities=21%  Similarity=0.324  Sum_probs=85.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+|++|||++..+....    .......||++|||||++..-.|+.++||||+|+...|+..|++||.+..+....+   
T Consensus       167 ~AKLADFGVAGQLTDTM----AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF---  239 (502)
T KOG0574|consen  167 IAKLADFGVAGQLTDTM----AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF---  239 (502)
T ss_pred             hhhhhhccccchhhhhH----HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE---
Confidence            36899999998775431    22234689999999999987789999999999999999999999998765432111   


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                         ..+......+.                     ....+...+.++++.||-.+|++|.|+.++++.
T Consensus       240 ---MIPT~PPPTF~---------------------KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  240 ---MIPTKPPPTFK---------------------KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             ---eccCCCCCCCC---------------------ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence               01111111111                     112445567889999999999999999999765

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.65  E-value=1.7e-16  Score=110.29  Aligned_cols=123  Identities=20%  Similarity=0.287  Sum_probs=79.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||++..+...............|+..|++||++... .++.++|+||||++++++++|+.||....... ....
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~  218 (267)
T cd06610         140 SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLML  218 (267)
T ss_pred             CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHH
Confidence            468999999887654321111122334578899999988766 58889999999999999999999996532211 0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .... .        .+......              ........+.+++.+||+.||++|||+.++++
T Consensus       219 ~~~~-~--------~~~~~~~~--------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         219 TLQN-D--------PPSLETGA--------------DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HhcC-C--------CCCcCCcc--------------ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            1000 0        00000000              00122345678999999999999999999876

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.4e-16  Score=112.17  Aligned_cols=117  Identities=23%  Similarity=0.252  Sum_probs=77.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||+++.......     .....|+..|++||++.+..++.++|+||+|++++++++|..||.+.....  ....
T Consensus       140 ~~~l~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~--~~~~  212 (285)
T cd05605         140 HIRISDLGLAVEIPEGET-----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV--KREE  212 (285)
T ss_pred             CEEEeeCCCceecCCCCc-----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh--HHHH
Confidence            478999999887543211     122367889999999988888999999999999999999999996532110  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +...        +.... ...+               ......+.+|+.+||+.||++||     +++++++.
T Consensus       213 ~~~~--------~~~~~-~~~~---------------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         213 VERR--------VKEDQ-EEYS---------------EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HHHH--------hhhcc-cccC---------------cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            0000        00000 0000               01233467799999999999999     88888654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.65  E-value=1.3e-16  Score=114.58  Aligned_cols=65  Identities=22%  Similarity=0.361  Sum_probs=52.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....    .......+|+..|+|||++.+..++.++|+||+||+++++++|+.||..
T Consensus       134 ~~kL~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         134 HIKLTDYGMCKEGIRP----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             CEEECcCccccccccC----CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence            4799999998753211    1112235689999999999888899999999999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.65  E-value=4e-16  Score=108.84  Aligned_cols=123  Identities=20%  Similarity=0.249  Sum_probs=74.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-------CCccccceehhhHHHHHHHh-CCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-------RVSTYGDVYSYGILLLETFT-GKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-------~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~   73 (163)
                      .+|++|||+++.......  ........++..|+|||++...       .++.++|+||||++++++++ |..||.....
T Consensus       138 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~  215 (269)
T cd05087         138 TVKIGDYGLSHNKYKEDY--YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD  215 (269)
T ss_pred             cEEECCccccccccCcce--eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh
Confidence            478999999875432211  1111223467789999987532       35788999999999999996 9999965321


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .  ........   ........+.+..                   .....+.+++..|| .+|++|||+.+|+..|+
T Consensus       216 ~--~~~~~~~~---~~~~~~~~~~~~~-------------------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         216 E--QVLTYTVR---EQQLKLPKPRLKL-------------------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             H--HHHHHHhh---cccCCCCCCccCC-------------------CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            1  11111000   0000011111100                   11223566888999 68999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.65  E-value=2.3e-16  Score=109.97  Aligned_cols=123  Identities=25%  Similarity=0.456  Sum_probs=78.6

Q ss_pred             ceeecccccccccCccccCCCc-ccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQS-SSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~-~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~   79 (163)
                      .+|++|||+++........... .......+..|++||.+.+..++.++|+||||++++|+++ |..||......  ...
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~  221 (269)
T cd05065         144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVI  221 (269)
T ss_pred             cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHH
Confidence            4789999998765432111000 0011112457999999888888999999999999999886 89998543211  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ..+....        .  .  ..+               ......+.+++.+||+.+|++||++.+++..|+++
T Consensus       222 ~~i~~~~--------~--~--~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         222 NAIEQDY--------R--L--PPP---------------MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHcCC--------c--C--CCc---------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1110000        0  0  000               01223467899999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.65  E-value=1.4e-16  Score=113.80  Aligned_cols=113  Identities=24%  Similarity=0.368  Sum_probs=75.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+||+||+++++++|..||......  .....
T Consensus       134 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~  207 (316)
T cd05619         134 HIKIADFGMCKENMLG----DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQS  207 (316)
T ss_pred             CEEEccCCcceECCCC----CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4789999998753221    11122346899999999998888999999999999999999999999653211  01110


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH-HHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS-DVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~v~~  148 (163)
                      +..         ..+.+..                   .....+.+++.+||+.||++|+++. ++++
T Consensus       208 i~~---------~~~~~~~-------------------~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         208 IRM---------DNPCYPR-------------------WLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHh---------CCCCCCc-------------------cCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            000         0000000                   1122356788999999999999996 5643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.65  E-value=1e-16  Score=115.59  Aligned_cols=144  Identities=15%  Similarity=0.145  Sum_probs=80.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....       .....++..|+|||.+.+. .++.++|+||||++++++++|+.||.+..... ....
T Consensus       155 ~~kL~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~  226 (342)
T cd07879         155 ELKILDFGLARHADAE-------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQ  226 (342)
T ss_pred             CEEEeeCCCCcCCCCC-------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            4789999998764321       1223567889999988663 47889999999999999999999996532110 0111


Q ss_pred             HHH--hcCchhhhhhhcccc-ccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH--HHHhH
Q 031224           81 FVK--NALPEQISEVLDPLF-VTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN--LQKVK  154 (163)
Q Consensus        81 ~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~--l~~~~  154 (163)
                      ...  ........+.+.... ............... ..........+.+++.+||+.||.+||++++++..  ++.+.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         227 ILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDF-STLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             HHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchH-HHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            100  000001111000000 000000000000000 00001123446789999999999999999999854  55543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.3e-16  Score=110.60  Aligned_cols=118  Identities=18%  Similarity=0.300  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC---CCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS---RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~---~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||++.......    .......++..|++||.+.+.   .++.++|+||||++++++++|+.||.+...... .
T Consensus       139 ~~~l~d~g~~~~~~~~~----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~  213 (262)
T cd06613         139 DVKLADFGVSAQLTATI----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-L  213 (262)
T ss_pred             CEEECccccchhhhhhh----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-H
Confidence            47899999987654321    111234578889999998766   688899999999999999999999965321110 0


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .......+.       ....                 .........+.+++.+||..+|..|||+.+++.
T Consensus       214 ~~~~~~~~~-------~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         214 FLISKSNFP-------PPKL-----------------KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHhccCC-------Cccc-----------------cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            000000000       0000                 000122345778999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.65  E-value=1.3e-16  Score=114.71  Aligned_cols=143  Identities=19%  Similarity=0.259  Sum_probs=80.2

Q ss_pred             ceeecccccccccCccccCC-CcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSN-QSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~-~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++......... ........|+..|++||.+.+. .++.++|+||||++++++++|+.||....... ...
T Consensus       145 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~  223 (337)
T cd07852         145 RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLE  223 (337)
T ss_pred             cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHH
Confidence            47999999998764332110 1122334678899999987653 47888999999999999999999986432211 000


Q ss_pred             HHHH--hcCc-hhhhhh---hccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVK--NALP-EQISEV---LDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~--~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....  .... ......   ....+...........    ...........+.+++.+||+.||++|||+.++++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         224 KIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKP----LDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccc----hhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            0000  0000 000000   0000000000000000    000111123457789999999999999999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.65  E-value=1.2e-16  Score=112.41  Aligned_cols=126  Identities=21%  Similarity=0.252  Sum_probs=80.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......      .....|+..|++||++.+..++.++|+|||||+++++++|..||..........   
T Consensus       142 ~~~l~d~gl~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~---  212 (284)
T cd06620         142 QIKLCDFGVSGELINSI------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ---  212 (284)
T ss_pred             cEEEccCCcccchhhhc------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh---
Confidence            47899999986542211      112457889999999887788899999999999999999999997543221000   


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                         ..+......+...+....+...           .......+.+++.+||+.||++|||+.+++++.
T Consensus       213 ---~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         213 ---DDPMGILDLLQQIVQEPPPRLP-----------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             ---hhhhHHHHHHHHHhhccCCCCC-----------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence               0000111111111111000000           001234567899999999999999999998763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.65  E-value=2.2e-16  Score=110.04  Aligned_cols=116  Identities=20%  Similarity=0.306  Sum_probs=74.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC--CccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR--VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~--~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .++|+|||++.......    .......|+..|++||++....  ++.++|+||||++++++++|..||.......  ..
T Consensus       147 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~  220 (268)
T cd06624         147 VVKISDFGTSKRLAGIN----PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AA  220 (268)
T ss_pred             eEEEecchhheecccCC----CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hh
Confidence            47899999987653321    1112234788899999886543  7789999999999999999999985431110  00


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....     .... .+.+.                   ......+..++.+||+.+|.+|||+.+++.
T Consensus       221 ~~~~~-----~~~~-~~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         221 MFKVG-----MFKI-HPEIP-------------------ESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             Hhhhh-----hhcc-CCCCC-------------------cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            00000     0000 00000                   012234667899999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.65  E-value=2.6e-16  Score=110.84  Aligned_cols=122  Identities=24%  Similarity=0.325  Sum_probs=80.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++.......  ........++..|++||.+.+..++.++|+|||||+++|+++ |..||.+....  ....
T Consensus       157 ~~~L~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~~~~  232 (288)
T cd05061         157 TVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLK  232 (288)
T ss_pred             cEEECcCCcccccccccc--ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            478999999886533211  111122234667999999888888999999999999999998 77788542111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .+           .+........                .....+.+++.+||+.||++|||+.++++.|.+..
T Consensus       233 ~~-----------~~~~~~~~~~----------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         233 FV-----------MDGGYLDQPD----------------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HH-----------HcCCCCCCCC----------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            10           0000000000                11235778999999999999999999998887653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.65  E-value=8.1e-17  Score=127.20  Aligned_cols=112  Identities=20%  Similarity=0.240  Sum_probs=75.5

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCC--CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS--RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~--~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      +||+|||+++.+....     ......|++.|+|||++.+.  .++.++|||||||+++++++|..||.....    ...
T Consensus       181 VKLsDFGlAr~l~~~s-----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~----~~q  251 (1021)
T PTZ00266        181 AKIGDFGLSKNIGIES-----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN----FSQ  251 (1021)
T ss_pred             eEEccCCccccccccc-----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc----HHH
Confidence            7999999998653321     11234689999999988543  478899999999999999999999964211    111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+.... ..      +.+...                  .....+.+|+..||+.+|.+||++.+++.
T Consensus       252 li~~lk-~~------p~lpi~------------------~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        252 LISELK-RG------PDLPIK------------------GKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHh-cC------CCCCcC------------------CCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            111000 00      000000                  11234678999999999999999999984

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.65  E-value=2.4e-16  Score=110.58  Aligned_cols=115  Identities=17%  Similarity=0.274  Sum_probs=74.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC----CCCccccceehhhHHHHHHHhCCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG----SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~----~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~   77 (163)
                      .+||+|||+++.+....     ......++..|++||.+.+    ..++.++|+||||++++++++|+.||......   
T Consensus       142 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---  213 (283)
T cd06617         142 QVKLCDFGISGYLVDSV-----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---  213 (283)
T ss_pred             CEEEeeccccccccccc-----ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---
Confidence            47899999988653321     1122357788999998754    34678899999999999999999998542111   


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ... .        .............               ......+.+++.+||..+|++|||+.++++
T Consensus       214 ~~~-~--------~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         214 FQQ-L--------KQVVEEPSPQLPA---------------EKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHH-H--------HHHHhcCCCCCCc---------------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            110 0        0001000000000               012344678999999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.65  E-value=3.2e-16  Score=108.45  Aligned_cols=115  Identities=26%  Similarity=0.427  Sum_probs=76.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......       .....+..|++||.+.+..++.+.|+||||++++++++ |..||......  ....
T Consensus       138 ~~kl~Dfg~~~~~~~~~-------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~  208 (254)
T cd05083         138 VAKVSDFGLARVGSMGV-------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVKE  208 (254)
T ss_pred             cEEECCCccceeccccC-------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHHH
Confidence            47899999987543210       11123567999999887788999999999999999997 88888543111  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+            .........               ......+.+++.+||+.+|+.||++.+++..|++
T Consensus       209 ~~------------~~~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         209 CV------------EKGYRMEPP---------------EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HH------------hCCCCCCCC---------------CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            11            000000000               0112346789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.65  E-value=1.1e-16  Score=114.96  Aligned_cols=69  Identities=26%  Similarity=0.250  Sum_probs=51.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.+...............|+..|++||++.+. .++.++|+||+|++++++++|+.||..
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~  212 (332)
T cd07857         143 ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKG  212 (332)
T ss_pred             CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence            479999999987643211111112234678899999987653 578899999999999999999999865

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.65  E-value=1e-16  Score=110.88  Aligned_cols=115  Identities=21%  Similarity=0.278  Sum_probs=77.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||.+......    ........|+..|+|||++.+..++.++|+||||++++++++|..||.....     ...
T Consensus       138 ~~~l~dfg~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~  208 (255)
T cd08219         138 KVKLGDFGSARLLTSP----GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNL  208 (255)
T ss_pred             cEEEcccCcceeeccc----ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHH
Confidence            4689999998765432    1111234578889999998887888999999999999999999999964211     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .........    .+     .+               ......+.+++.+||+.||++|||+.+++..
T Consensus       209 ~~~~~~~~~----~~-----~~---------------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         209 ILKVCQGSY----KP-----LP---------------SHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHhcCCC----CC-----CC---------------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            110000000    00     00               0112346678999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.65  E-value=4.7e-17  Score=116.58  Aligned_cols=114  Identities=17%  Similarity=0.217  Sum_probs=76.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+|||||+++++++|..||......  .....
T Consensus       134 ~~kL~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~  207 (325)
T cd05594         134 HIKITDFGLCKEGIKD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL  207 (325)
T ss_pred             CEEEecCCCCeecCCC----CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHH
Confidence            4799999998754321    11112346899999999998888999999999999999999999999643111  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +.           .....  .+.               .....+.+++.+||+.||++|+     ++.++++.
T Consensus       208 i~-----------~~~~~--~p~---------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         208 IL-----------MEEIR--FPR---------------TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             Hh-----------cCCCC--CCC---------------CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            00           00000  000               1123456788999999999997     88888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.65  E-value=2.7e-16  Score=109.60  Aligned_cols=122  Identities=23%  Similarity=0.412  Sum_probs=80.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||+++.+....... .......++..|++||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~  220 (267)
T cd05066         144 VCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIK  220 (267)
T ss_pred             eEEeCCCCccccccccccee-eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHH
Confidence            47899999998764321111 11111223457999999987788999999999999999886 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+.....            ....               ......+.+++.+||+.+|.+|||+.++++.|.++
T Consensus       221 ~~~~~~~------------~~~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         221 AIEEGYR------------LPAP---------------MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHhCCCc------------CCCC---------------CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            1111000            0000               01123467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.65  E-value=2.1e-16  Score=113.19  Aligned_cols=108  Identities=18%  Similarity=0.239  Sum_probs=72.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+||+||+++++++|+.||.+....  .....
T Consensus       139 ~~kL~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~  212 (324)
T cd05587         139 HIKIADFGMCKENIFG----GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQS  212 (324)
T ss_pred             CEEEeecCcceecCCC----CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4799999998753211    11122346899999999998888999999999999999999999999653211  01110


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                      +.           ....  ..+.               .....+.+++.+||..||.+|++.
T Consensus       213 i~-----------~~~~--~~~~---------------~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         213 IM-----------EHNV--SYPK---------------SLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HH-----------cCCC--CCCC---------------CCCHHHHHHHHHHhhcCHHHcCCC
Confidence            10           0000  0000               112345788999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.64  E-value=1.7e-16  Score=110.35  Aligned_cols=119  Identities=19%  Similarity=0.329  Sum_probs=77.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||.+.........      ...++..|++||.+.+..++.++|+||||++++++++|..||.............
T Consensus       139 ~~~l~d~g~~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  212 (265)
T cd06605         139 QIKLCDFGVSGQLVNSLAK------TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFEL  212 (265)
T ss_pred             CEEEeecccchhhHHHHhh------cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHH
Confidence            4789999998765322111      1457788999999888888999999999999999999999986542211111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...        ....    ..+..   .     ..   .....+.+++.+||..||++|||+.+++..
T Consensus       213 ~~~--------~~~~----~~~~~---~-----~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         213 LQY--------IVNE----PPPRL---P-----SG---KFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHH--------HhcC----CCCCC---C-----hh---hcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            111        0000    00000   0     00   023346788899999999999999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.64  E-value=4.9e-16  Score=108.16  Aligned_cols=122  Identities=16%  Similarity=0.216  Sum_probs=78.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||.+..+...............++..|++||.+.+..++.++|+||+|++++++++|..||......  .....
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~  219 (268)
T cd06630         142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLAL  219 (268)
T ss_pred             EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHH
Confidence            3789999998876543111111122345788999999988777889999999999999999999998542111  00111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....        .........+               ......+.+++.+||+.+|++|||+.++++
T Consensus       220 ~~~~--------~~~~~~~~~~---------------~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         220 IFKI--------ASATTAPSIP---------------EHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHH--------hccCCCCCCc---------------hhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            0000        0000000000               022344677999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.64  E-value=1.6e-16  Score=113.94  Aligned_cols=65  Identities=22%  Similarity=0.360  Sum_probs=52.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....    .......+|+..|+|||++.+..++.++|+|||||+++++++|..||..
T Consensus       134 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         134 HIKLTDYGMCKEGLGP----GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             CEEEeccccceeccCC----CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence            4799999998753221    1112235689999999999888899999999999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.64  E-value=1.5e-16  Score=113.83  Aligned_cols=109  Identities=17%  Similarity=0.150  Sum_probs=73.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|++.|+|||++.+..++.++|+|||||+++++++|..||.....     ...
T Consensus       134 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~  204 (323)
T cd05575         134 HVVLTDFGLCKEGIEH----SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEM  204 (323)
T ss_pred             cEEEeccCCCcccccC----CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHH
Confidence            4799999998754221    1122234689999999999888899999999999999999999999965311     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS  144 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  144 (163)
                      ...        ....... ..+                .....+.+++.+||+.||++||++.
T Consensus       205 ~~~--------i~~~~~~-~~~----------------~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         205 YDN--------ILNKPLR-LKP----------------NISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHH--------HHcCCCC-CCC----------------CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            100        0000000 000                1123457799999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.64  E-value=1.8e-16  Score=110.29  Aligned_cols=109  Identities=17%  Similarity=0.226  Sum_probs=72.5

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHH-hCCCCCccccccCcchHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETF-TGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~-~g~~p~~~~~~~~~~~~~   80 (163)
                      ++++|||++......        ....++..|+|||.+.. ..++.++||||||+++++++ .|..|+.......  ...
T Consensus       151 ~~l~d~g~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~  220 (262)
T cd05077         151 IKLSDPGIPITVLSR--------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KER  220 (262)
T ss_pred             eEeCCCCCCccccCc--------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHH
Confidence            688999988654221        12356788999998864 45888999999999999998 4777775421100  000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .            .........                 .....+.+|+.+||+.||.+||++.++++.+
T Consensus       221 ~------------~~~~~~~~~-----------------~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         221 F------------YEGQCMLVT-----------------PSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             H------------HhcCccCCC-----------------CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            0            000000000                 1123467899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.64  E-value=1.2e-16  Score=115.02  Aligned_cols=145  Identities=17%  Similarity=0.118  Sum_probs=81.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......    .......++..|++||.+.. ..++.++|+||||++++++++|+.||.+....  ....
T Consensus       146 ~~kL~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~  219 (337)
T cd07858         146 DLKICDFGLARTTSEKG----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV--HQLK  219 (337)
T ss_pred             CEEECcCccccccCCCc----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH--HHHH
Confidence            47899999998653321    11123457888999998765 35888999999999999999999999653210  0000


Q ss_pred             HHHhc----CchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH--HHHh
Q 031224           81 FVKNA----LPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN--LQKV  153 (163)
Q Consensus        81 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~--l~~~  153 (163)
                      .+...    .+.......+.................. ..........+.+++.+||+.+|++|||++++++.  +..+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         220 LITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             HHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            01000    0001000000000000000000000000 00111234557889999999999999999999876  5544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.64  E-value=1.4e-16  Score=110.54  Aligned_cols=110  Identities=19%  Similarity=0.288  Sum_probs=72.4

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCC-CCCccccccCcchHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGK-RPTSDIFAEGLDLHN   80 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~-~p~~~~~~~~~~~~~   80 (163)
                      ++++|||++.....        .....++..|++||++.+. .++.++|+||||++++++++|. .|+......  ....
T Consensus       147 ~~l~d~g~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~~  216 (258)
T cd05078         147 IKLSDPGISITVLP--------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKLQ  216 (258)
T ss_pred             EEecccccccccCC--------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHHH
Confidence            58899998865422        1123567889999998764 4788999999999999999985 555332110  0000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .            ....  ...+.               .....+.+++.+||+.||++|||++++++.|+
T Consensus       217 ~------------~~~~--~~~~~---------------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         217 F------------YEDR--HQLPA---------------PKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             H------------HHcc--ccCCC---------------CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            0            0000  00000               01134678999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.64  E-value=4.5e-16  Score=107.58  Aligned_cols=112  Identities=19%  Similarity=0.301  Sum_probs=76.2

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFV   82 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~   82 (163)
                      +|++|||++.......     ......++..|++||.+.+..++.++|+||||++++++++|..||......  .....+
T Consensus       141 ~~l~d~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~  213 (256)
T cd08220         141 VKIGDFGISKILSSKS-----KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKI  213 (256)
T ss_pred             EEEccCCCceecCCCc-----cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHH
Confidence            6899999998764321     112245788999999998777889999999999999999999998543111  111110


Q ss_pred             HhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           83 KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..   ..    ..+     .+               ......+..++.+||+.+|++|||+.+++.
T Consensus       214 ~~---~~----~~~-----~~---------------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         214 MS---GT----FAP-----IS---------------DRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             Hh---cC----CCC-----CC---------------CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            00   00    000     00               011234678899999999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.64  E-value=7.9e-16  Score=108.36  Aligned_cols=120  Identities=21%  Similarity=0.254  Sum_probs=77.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcccccc---Ccch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAE---GLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~---~~~~   78 (163)
                      .++|+|||++.......      .....++..|++||.+.+..++.++|+||+|++++++++|..||......   ....
T Consensus       143 ~~~l~dfg~~~~~~~~~------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  216 (287)
T cd06621         143 QVKLCDFGVSGELVNSL------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIEL  216 (287)
T ss_pred             eEEEeeccccccccccc------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHH
Confidence            47899999987653221      11234677899999988878899999999999999999999999654221   0111


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...+.....        +.+.....             ........+.+++.+||+.+|++|||+.|++.
T Consensus       217 ~~~~~~~~~--------~~~~~~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         217 LSYIVNMPN--------PELKDEPG-------------NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHhcCCc--------hhhccCCC-------------CCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            111111000        00000000             00012345678999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.64  E-value=9.8e-17  Score=114.94  Aligned_cols=112  Identities=18%  Similarity=0.176  Sum_probs=74.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|++.|+|||++.+..++.++|+||+||+++++++|..||.+....     ..
T Consensus       134 ~~kl~DfG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~  204 (325)
T cd05602         134 HIVLTDFGLCKENIEH----NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EM  204 (325)
T ss_pred             CEEEccCCCCcccccC----CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-----HH
Confidence            4789999998754221    11122356899999999998888999999999999999999999999653211     11


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVV  147 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~  147 (163)
                      ...        ......... +                .....+.+++.+||+.||.+|+++.+.+
T Consensus       205 ~~~--------i~~~~~~~~-~----------------~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         205 YDN--------ILNKPLQLK-P----------------NITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             HHH--------HHhCCcCCC-C----------------CCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence            000        000000000 0                1123356788899999999999987433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.64  E-value=4.3e-16  Score=113.08  Aligned_cols=117  Identities=21%  Similarity=0.244  Sum_probs=83.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+|++|||++.....     .......+||+.|+|||++....|+..+|+||+|++.+.|+.|.+||.+........ ..
T Consensus       177 ~ik~~DFGla~~~~~-----~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i  250 (382)
T KOG0032|consen  177 RIKLIDFGLAKFIKP-----GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AI  250 (382)
T ss_pred             cEEEeeCCCceEccC-----CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HH
Confidence            589999999998754     223445789999999999988899999999999999999999999997643221111 11


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...            .+....+             ........+-+++..++..||.+|+|+.++++.
T Consensus       251 ~~~------------~~~f~~~-------------~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  251 LRG------------DFDFTSE-------------PWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             HcC------------CCCCCCC-------------CccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            111            1110100             011223446678889999999999999999874

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.64  E-value=3.6e-16  Score=109.56  Aligned_cols=139  Identities=17%  Similarity=0.117  Sum_probs=80.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.+.......    .......++..|++||.+.+. .++.++|+||+|++++++++|+.||......  ....
T Consensus       136 ~~~l~df~~~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--~~~~  209 (283)
T cd05118         136 VLKLADFGLARSFGSPV----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI--DQLF  209 (283)
T ss_pred             cEEEeeeeeeEecCCCc----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence            47899999987764432    111223567889999988766 5888999999999999999999998653211  1111


Q ss_pred             HHHhc----CchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNA----LPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+...    .+..+....+ ................ ...........+.+++.+||+.||.+||++++++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         210 KIFRTLGTPDPEVWPKFTS-LARNYKFSFPKKAGMP-LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHHcCCCchHhcccchh-hhhhhhhhhccccccC-HHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            11110    0111111100 0000000000000000 01112234566789999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.64  E-value=1.9e-16  Score=114.22  Aligned_cols=111  Identities=16%  Similarity=0.175  Sum_probs=76.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....       .....|++.|+|||++.+..++.++|+|||||+++++++|..||.+....  .....
T Consensus       169 ~ikL~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~~~  239 (340)
T PTZ00426        169 FIKMTDFGFAKVVDTR-------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LIYQK  239 (340)
T ss_pred             CEEEecCCCCeecCCC-------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HHHHH
Confidence            4799999999865321       12346899999999998877899999999999999999999999653111  00111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +           ......  .+.               .....+.+++.+|++.||.+|+     |++++++.
T Consensus       240 i-----------~~~~~~--~p~---------------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        240 I-----------LEGIIY--FPK---------------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             H-----------hcCCCC--CCC---------------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            1           010000  000               1112346789999999999995     88888764

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.64  E-value=2.6e-16  Score=110.98  Aligned_cols=116  Identities=16%  Similarity=0.197  Sum_probs=74.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-----CCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-----RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-----~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||+++.......    ......|+..|++||.+...     .++.++|+||||++++++++|+.||......  
T Consensus       166 ~~kl~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~--  239 (291)
T cd06639         166 GVKLVDFGVSAQLTSTRL----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV--  239 (291)
T ss_pred             CEEEeecccchhcccccc----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH--
Confidence            478999999886543211    11223578889999987543     2678899999999999999999998653211  


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                         ..+.......     .+.+..                 .......+.+++.+||+.+|++||++.++++
T Consensus       240 ---~~~~~~~~~~-----~~~~~~-----------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         240 ---KTLFKIPRNP-----PPTLLH-----------------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             ---HHHHHHhcCC-----CCCCCc-----------------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence               0000000000     000000                 0012234678999999999999999999876

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.64  E-value=4.7e-16  Score=108.30  Aligned_cols=68  Identities=26%  Similarity=0.400  Sum_probs=51.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.+........ ......++..|+|||.+.+..++.++|+||+||+++++++|+.||..
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~  211 (266)
T cd06651         144 NVKLGDFGASKRLQTICMSGT-GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE  211 (266)
T ss_pred             CEEEccCCCccccccccccCC-ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence            479999999876532111111 11123478889999999887889999999999999999999999964

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.64  E-value=2.2e-16  Score=110.93  Aligned_cols=117  Identities=20%  Similarity=0.238  Sum_probs=75.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----CCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||+++......    .......|+..|+|||++..     ..++.++|+||+||+++++++|+.||......  
T Consensus       162 ~~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~--  235 (286)
T cd06638         162 GVKLVDFGVSAQLTSTR----LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM--  235 (286)
T ss_pred             CEEEccCCceeecccCC----CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--
Confidence            37899999987654321    11122357889999998743     34788999999999999999999998643210  


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                        .. ... ....    ..+..  ..+               ......+..++.+||+.||++|||+.++++.
T Consensus       236 --~~-~~~-~~~~----~~~~~--~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         236 --RA-LFK-IPRN----PPPTL--HQP---------------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             --HH-Hhh-cccc----CCCcc--cCC---------------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence              00 000 0000    00000  000               0112346789999999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.64  E-value=6.2e-16  Score=108.48  Aligned_cols=138  Identities=16%  Similarity=0.129  Sum_probs=77.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcc--h
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD--L   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~--~   78 (163)
                      .++|+|||++........     .....++..|++||.+... .++.++|+||||++++++++|+.||.........  .
T Consensus       137 ~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~  211 (283)
T cd07830         137 VVKIADFGLAREIRSRPP-----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKI  211 (283)
T ss_pred             CEEEeecccceeccCCCC-----cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHH
Confidence            478999999876543211     1224578889999987543 4788999999999999999999998653221100  0


Q ss_pred             HHHHHhcCchhhhh--hhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISE--VLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...........+..  .....+....+......    ...........+.+++.+||+.+|++|||++|++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         212 CSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS----LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHhcCCCChhhhhhHhhhhcccccccccccccc----HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            00000000000000  00000000000000000    00011111355788999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.63  E-value=2.5e-16  Score=111.61  Aligned_cols=137  Identities=18%  Similarity=0.179  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++.......    .......++..|++||.+.+. .++.++|+||+|++++++++|+.||......  ....
T Consensus       142 ~~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~  215 (301)
T cd07873         142 ELKLADFGLARAKSIPT----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLH  215 (301)
T ss_pred             cEEECcCcchhccCCCC----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence            47999999987643221    111223467889999987654 4788899999999999999999999653221  1111


Q ss_pred             HHHhcC----chhhhhhhcccccc--CCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNAL----PEQISEVLDPLFVT--GGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+....    ...+...++.....  ..+......    ...........+.+|+.+|++.||.+|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         216 FIFRILGTPTEETWPGILSNEEFKSYNYPKYRADC----LHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HHHHHcCCCChhhchhhhccccccccccCcccccc----HHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            111111    11111111100000  000000000    00001112334578999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.63  E-value=4.6e-16  Score=110.73  Aligned_cols=70  Identities=20%  Similarity=0.309  Sum_probs=52.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCcccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIF   72 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~   72 (163)
                      .+||+|||+++........ ........++..|+|||++.+. .++.++|+||||++++++++|..||....
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~  220 (316)
T cd07842         150 VVKIGDLGLARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE  220 (316)
T ss_pred             eEEECCCccccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence            4789999999876443211 1112234578889999987664 47889999999999999999999997543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.63  E-value=2.2e-16  Score=109.83  Aligned_cols=120  Identities=18%  Similarity=0.224  Sum_probs=76.7

Q ss_pred             ceeecccccccccCccccC--CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRS--NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .++|+|||++.........  .........|+..|++||+..+..++.++|+||+|++++++++|..||......  ...
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~  217 (265)
T cd06631         140 IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL--AAM  217 (265)
T ss_pred             eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH--HHH
Confidence            4789999998765321000  011112345788999999998877889999999999999999999999642110  000


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ......     .... +.+..                   .....+.+++.+||+.+|++||++.+++.
T Consensus       218 ~~~~~~-----~~~~-~~~~~-------------------~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         218 FYIGAH-----RGLM-PRLPD-------------------SFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHhhhc-----cCCC-CCCCC-------------------CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000000     0000 00000                   11234577899999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.63  E-value=2.8e-16  Score=110.89  Aligned_cols=116  Identities=16%  Similarity=0.200  Sum_probs=73.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||++......    ........++..|++||++.     ...++.++|+||||++++++++|..||......  
T Consensus       148 ~~kl~dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--  221 (292)
T cd06644         148 DIKLADFGVSAKNVKT----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--  221 (292)
T ss_pred             CEEEccCccceecccc----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--
Confidence            4789999988754321    11112245778899999874     334678899999999999999999998543211  


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                         ..........     .+...  .+               ......+.+++.+||+.+|++||+++++++
T Consensus       222 ---~~~~~~~~~~-----~~~~~--~~---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         222 ---RVLLKIAKSE-----PPTLS--QP---------------SKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             ---HHHHHHhcCC-----CccCC--CC---------------cccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence               0000000000     00000  00               011234677899999999999999999976

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=2.7e-16  Score=109.67  Aligned_cols=116  Identities=18%  Similarity=0.274  Sum_probs=74.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----CCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||++.......    .......|+..|+|||++..     ..++.++|+||||++++++++|+.||.+..... 
T Consensus       151 ~~~l~d~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-  225 (275)
T cd06608         151 EVKLVDFGVSAQLDSTL----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-  225 (275)
T ss_pred             eEEECCCccceecccch----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-
Confidence            47899999987654321    11123457888999998743     236788999999999999999999996432110 


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .... +...        ..+.+.                 ........+.+++.+||..||++|||+.++++
T Consensus       226 ~~~~-~~~~--------~~~~~~-----------------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         226 ALFK-IPRN--------PPPTLK-----------------SPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHHH-hhcc--------CCCCCC-----------------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            0000 0000        000000                 00122345678999999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.63  E-value=3.3e-16  Score=105.52  Aligned_cols=145  Identities=20%  Similarity=0.224  Sum_probs=84.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccc-cCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFA-EGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~-~~~~~~   79 (163)
                      .+||+|||+++.+..........-++.+-|.+|++||.+.+.. |+++.|+|+-||++.|++++.+.+.+... ....++
T Consensus       162 ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~I  241 (376)
T KOG0669|consen  162 ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLI  241 (376)
T ss_pred             eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHH
Confidence            4689999999887543222222233456689999999998875 99999999999999999999998876432 112222


Q ss_pred             HHHHhcCc-hhhhhhhccccccCCCCCCCchhhhhhhHhhHHHH------HHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALP-EQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESL------ATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+.+... +.++++.+--+........   -+.-......+-.      ...++|+...+.+||++|+++.++++.
T Consensus       242 s~LcGs~tkevWP~~d~lpL~~sie~eP---l~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  242 SQLCGSITKEVWPNVDNLPLYQSIELEP---LPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             HHHhccCCcccCCCcccchHHHhccCCC---CCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            22222211 1221111110000000000   0000000001111      246788899999999999999998754

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.63  E-value=4.6e-16  Score=109.54  Aligned_cols=117  Identities=24%  Similarity=0.332  Sum_probs=76.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++.......     ......|+..|++||++.+..++.++|+||+|++++++++|..||.......  ....
T Consensus       140 ~~kl~Dfg~~~~~~~~~-----~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--~~~~  212 (285)
T cd05632         140 HIRISDLGLAVKIPEGE-----SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--KREE  212 (285)
T ss_pred             CEEEecCCcceecCCCC-----cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence            47899999987653221     1123468899999999988889999999999999999999999996532110  0001


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~~  149 (163)
                      +.......     ...+.                   ......+.+|+..||+.||++||+     +.+++..
T Consensus       213 ~~~~~~~~-----~~~~~-------------------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         213 VDRRVLET-----EEVYS-------------------AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             HHHhhhcc-----ccccC-------------------ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            10000000     00000                   011233567889999999999999     6676653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.63  E-value=1.5e-15  Score=105.95  Aligned_cols=123  Identities=18%  Similarity=0.241  Sum_probs=72.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-------CCCccccceehhhHHHHHHHh-CCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-------SRVSTYGDVYSYGILLLETFT-GKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-------~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~   73 (163)
                      .+||+|||++........  ........++..|++||++..       ..++.++|+||||++++|+++ +..||.....
T Consensus       137 ~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~  214 (268)
T cd05086         137 TVKVGDYGIGPSRYKEDY--IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD  214 (268)
T ss_pred             cEEecccccccccCcchh--hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH
Confidence            478999999864321100  111123456788999998743       235678999999999999997 5667754211


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                           ................++.+...                   ....+.+++..|| .+|++||++++|++.|.
T Consensus       215 -----~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         215 -----REVLNHVIKDQQVKLFKPQLELP-------------------YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             -----HHHHHHHHhhcccccCCCccCCC-------------------CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence                 11111111111111111111111                   1123566778899 68999999999988773

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.63  E-value=4.8e-16  Score=109.06  Aligned_cols=140  Identities=18%  Similarity=0.185  Sum_probs=78.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++........   .......++..|++||.+.+. .++.++|+||||++++++++|+.||......  ....
T Consensus       138 ~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~~  212 (287)
T cd07840         138 VLKLADFGLARPYTKRNS---ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQLE  212 (287)
T ss_pred             CEEEccccceeeccCCCc---ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHH
Confidence            478999999987643211   111223467789999977653 4788999999999999999999998653221  1111


Q ss_pred             HHHhcC----chhhhhhhccccccCCCCCCCchhhhhhhHhhHH-HHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNAL----PEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE-SLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+....    ...+....+-........  .............. ....+.+++.+||+.+|.+||+++++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         213 KIFELCGSPTDENWPGVSKLPWFENLKP--KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHhCCCchhhccccccchhhhhccc--cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            111100    000000000000000000  00000000011111 2456789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.63  E-value=3.7e-16  Score=112.06  Aligned_cols=150  Identities=17%  Similarity=0.137  Sum_probs=85.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||++......... ........++..|++||.+.+. .++.++|+||+|++++++++|..||.......  ...
T Consensus       141 ~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~--~~~  217 (330)
T cd07834         141 DLKICDFGLARGVDPDEDE-KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID--QLN  217 (330)
T ss_pred             CEEEcccCceEeecccccc-cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH--HHH
Confidence            4789999999876443110 0112234578889999998877 68899999999999999999999996543211  001


Q ss_pred             HHHhcCc----hhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH--HHHhH
Q 031224           81 FVKNALP----EQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN--LQKVK  154 (163)
Q Consensus        81 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~--l~~~~  154 (163)
                      .+.....    ..+.............. ...................+.+++.+||+.+|.+|||+++++..  +..+.
T Consensus       218 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         218 LIVEVLGTPSEEDLKFITSEKARNYLKS-LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             HHHHhcCCCChhHhhhccccchhhHHhh-cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence            1111000    00000000000000000 00000000000111234557889999999999999999999874  55544


Q ss_pred             H
Q 031224          155 S  155 (163)
Q Consensus       155 ~  155 (163)
                      .
T Consensus       297 ~  297 (330)
T cd07834         297 D  297 (330)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.63  E-value=2.1e-16  Score=111.86  Aligned_cols=116  Identities=16%  Similarity=0.191  Sum_probs=76.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++........    ......++..|++||.+.+..++.++|+||||++++++++|..||...........  
T Consensus       153 ~~~l~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~--  226 (297)
T cd06656         153 SVKLTDFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--  226 (297)
T ss_pred             CEEECcCccceEccCCcc----CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee--
Confidence            478999999876543211    11224578889999998887788999999999999999999999965321110000  


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...   ..     .+...  .               .......+.+++.+||+.+|++||++.++++
T Consensus       227 ~~~---~~-----~~~~~--~---------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         227 IAT---NG-----TPELQ--N---------------PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             ecc---CC-----CCCCC--C---------------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000   00     00000  0               0011233567889999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.63  E-value=1.5e-16  Score=117.92  Aligned_cols=113  Identities=23%  Similarity=0.420  Sum_probs=80.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .|||+|+|+|.....      ......+||+.|||||+-. ..|++.+||||||++++||.++..||.........+...
T Consensus       184 ~VKIGDLGLAtl~r~------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV  256 (632)
T KOG0584|consen  184 EVKIGDLGLATLLRK------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV  256 (632)
T ss_pred             ceeecchhHHHHhhc------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH
Confidence            489999999987643      1223468999999999754 569999999999999999999999997653222222223


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+..|..+..+-++                           .+..|+.+|+.. .++|+|+.|+|+.
T Consensus       257 ~SGiKP~sl~kV~dP---------------------------evr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  257 TSGIKPAALSKVKDP---------------------------EVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             HcCCCHHHhhccCCH---------------------------HHHHHHHHHhcC-chhccCHHHHhhC
Confidence            333333333332222                           245688899999 8899999999863

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.63  E-value=1.8e-16  Score=112.30  Aligned_cols=117  Identities=18%  Similarity=0.279  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++..+....    .......|+..|++||++.+..++.++|+||||++++++++|+.||......  .....
T Consensus       155 ~~kL~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~  228 (297)
T cd06659         155 RVKLSDFGFCAQISKDV----PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKR  228 (297)
T ss_pred             cEEEeechhHhhccccc----ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            47899999987654321    1112245788999999998878899999999999999999999998642110  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +....        .+.....                 ......+.+++.+||+.+|.+||+++++++.
T Consensus       229 ~~~~~--------~~~~~~~-----------------~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         229 LRDSP--------PPKLKNA-----------------HKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HhccC--------CCCcccc-----------------CCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            00000        0000000                 0112335678899999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.63  E-value=1e-15  Score=109.03  Aligned_cols=147  Identities=16%  Similarity=0.188  Sum_probs=79.2

Q ss_pred             ceeecccccccccCccccC---CCcccccccccccccCCCCCCCC--CCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGS--RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~g~~~y~~pe~~~~~--~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+|++|||.+.........   .........++..|++||++...  .++.++|+||||++++++++|+.||.+..... 
T Consensus       139 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-  217 (314)
T cd08216         139 KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-  217 (314)
T ss_pred             ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            4688999988755322110   11111223467789999988653  47889999999999999999999997532211 


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCC----CCCc-hhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEE----GEGT-AEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..........+.......-+........    .... ................+.+++.+||+.||++|||+.++++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         218 MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             HHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            1111111110000000000000000000    0000 00000011122333457789999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=3.2e-16  Score=113.22  Aligned_cols=121  Identities=19%  Similarity=0.244  Sum_probs=77.9

Q ss_pred             ceeecccccccccCcccc-------------------------CCCcccccccccccccCCCCCCCCCCccccceehhhH
Q 031224            2 TAHVGDFGLTRFIPEAIR-------------------------SNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGI   56 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~   56 (163)
                      .+||+|||+++.......                         ..........|+..|+|||++.+..++.++|||||||
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  218 (350)
T cd05573         139 HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGV  218 (350)
T ss_pred             CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecch
Confidence            479999999987643210                         0001122346899999999998888999999999999


Q ss_pred             HHHHHHhCCCCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCC
Q 031224           57 LLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVES  136 (163)
Q Consensus        57 ~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d  136 (163)
                      +++++++|+.||.......  ....+.. ...       . .  ..+...             .....+.+++.+|+. |
T Consensus       219 il~ell~g~~Pf~~~~~~~--~~~~i~~-~~~-------~-~--~~p~~~-------------~~~~~~~~li~~ll~-d  271 (350)
T cd05573         219 ILYEMLYGFPPFYSDTLQE--TYNKIIN-WKE-------S-L--RFPPDP-------------PVSPEAIDLICRLLC-D  271 (350)
T ss_pred             hhhhhccCCCCCCCCCHHH--HHHHHhc-cCC-------c-c--cCCCCC-------------CCCHHHHHHHHHHcc-C
Confidence            9999999999996532110  0000000 000       0 0  000000             012345678889997 9


Q ss_pred             cCCCCC-HHHHHHH
Q 031224          137 PRERMD-ISDVVNN  149 (163)
Q Consensus       137 p~~Rps-~~~v~~~  149 (163)
                      |.+|++ ++++++.
T Consensus       272 p~~R~~s~~~ll~h  285 (350)
T cd05573         272 PEDRLGSFEEIKSH  285 (350)
T ss_pred             hhhcCCCHHHHhcC
Confidence            999999 9999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.62  E-value=4.3e-16  Score=107.62  Aligned_cols=69  Identities=23%  Similarity=0.337  Sum_probs=54.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .|||+|||++|.+.....- .......+-|+||+|||.+.+.. |+.+.|+|++||++.|+++.++.|.+.
T Consensus       174 ~VKIaDlGlaR~~~~plkp-l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~  243 (438)
T KOG0666|consen  174 RVKIADLGLARLFNNPLKP-LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR  243 (438)
T ss_pred             eeEeecccHHHHhhccccc-cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence            4899999999988554111 11122356699999999999876 899999999999999999998888653

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.62  E-value=5.1e-16  Score=109.57  Aligned_cols=138  Identities=17%  Similarity=0.090  Sum_probs=76.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+.....    ......+++.|+|||++.+. .++.++|+||||++++++++|..||....... ....
T Consensus       149 ~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~  223 (295)
T cd07837         149 LLKIADLGLGRAFSIPVK----SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLH  223 (295)
T ss_pred             eEEEeecccceecCCCcc----ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHH
Confidence            478999999886532211    11123467789999987654 47889999999999999999999986532110 0000


Q ss_pred             HHH---hcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVK---NALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...   ......+.....-......+...    ..............+.+++.+||+.||.+|||+.+++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         224 IFKLLGTPTEQVWPGVSKLRDWHEFPQWK----PQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             HHHHhCCCChhhCcchhhccchhhcCccc----chhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            000   00000000000000000000000    00000011123345678999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.62  E-value=2.5e-16  Score=116.41  Aligned_cols=130  Identities=17%  Similarity=0.212  Sum_probs=88.3

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh--CCCCCccccccCcch
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT--GKRPTSDIFAEGLDL   78 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~--g~~p~~~~~~~~~~~   78 (163)
                      +++||+|||++|-+-.+.+...  ....+-.+.|||+|.+..++++.++|+|+||+.+||+++  ...||.....+.  .
T Consensus       674 ~~iKiadfgmsR~lysg~yy~v--qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--v  749 (807)
T KOG1094|consen  674 FTIKIADFGMSRNLYSGDYYRV--QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--V  749 (807)
T ss_pred             ccEEecCcccccccccCCceee--ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--H
Confidence            5799999999996533322221  122345688999999999999999999999999999876  678887643221  1


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .+.....++.+-..++                    ......+...+.+++.+||..|..+|||++++...|.+..
T Consensus       750 ven~~~~~~~~~~~~~--------------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  750 VENAGEFFRDQGRQVV--------------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             HHhhhhhcCCCCccee--------------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence            1111111111111100                    1112255667889999999999999999999998887653

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.62  E-value=7.1e-16  Score=106.70  Aligned_cols=115  Identities=19%  Similarity=0.291  Sum_probs=78.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.......    ......++..|.+||.+.+..++.++|+||||++++++++|..||......  .....
T Consensus       139 ~~kl~d~~~~~~~~~~~~----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--~~~~~  212 (256)
T cd08221         139 LIKLGDFGISKILGSEYS----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--NLVVK  212 (256)
T ss_pred             CEEECcCcceEEcccccc----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH--HHHHH
Confidence            479999999987644321    122345788999999988777888999999999999999999998542110  01100


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +.   ...+.    +    ..                ......+.+++.+||+.+|.+||++.++++.
T Consensus       213 ~~---~~~~~----~----~~----------------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         213 IV---QGNYT----P----VV----------------SVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HH---cCCCC----C----Cc----------------cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            00   00000    0    00                0223346788999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.62  E-value=5.4e-16  Score=106.57  Aligned_cols=119  Identities=16%  Similarity=0.187  Sum_probs=80.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC--cchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG--LDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~--~~~~   79 (163)
                      .+||+|||+++.-..+     .....-+-|++|.|||++...+|+...|+||+|+++|-++.|.+||+......  ..+.
T Consensus       202 ~lKLtDfGFAK~t~~~-----~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk  276 (400)
T KOG0604|consen  202 PLKLTDFGFAKETQEP-----GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK  276 (400)
T ss_pred             ceEecccccccccCCC-----ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHH
Confidence            4699999999875332     22233467999999999987789999999999999999999999998654311  1111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+....           .  .+++           .......+...++++..|..+|++|.|+.++++.
T Consensus       277 ~rI~~gq-----------y--~FP~-----------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  277 RRIRTGQ-----------Y--EFPE-----------PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             hHhhccC-----------c--cCCC-----------hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            1111110           0  0000           0112334445667888899999999999998753

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.62  E-value=4.1e-16  Score=107.92  Aligned_cols=115  Identities=19%  Similarity=0.294  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||++........    ......|+..|++||++.+..++.++|+||||++++++++|+.||....     ....
T Consensus       139 ~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~  209 (256)
T cd08218         139 TIKLGDFGIARVLNSTVE----LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNL  209 (256)
T ss_pred             CEEEeeccceeecCcchh----hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHH
Confidence            478999999876543211    1112357788999999888788899999999999999999999985421     1111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...        .+........                ......+.+++.+||+.+|++||++.+|++.
T Consensus       210 ~~~--------~~~~~~~~~~----------------~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         210 VLK--------IIRGSYPPVS----------------SHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHH--------HhcCCCCCCc----------------ccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            100        0000000000                0223346789999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=6.7e-16  Score=108.05  Aligned_cols=116  Identities=23%  Similarity=0.342  Sum_probs=76.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||++..+....    .......|+..|++||.+... .++.++|+||||++++++++|..||......  ....
T Consensus       139 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~  212 (277)
T cd06917         139 NVKLCDFGVAALLNQNS----SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--RAMM  212 (277)
T ss_pred             CEEEccCCceeecCCCc----cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--hhhh
Confidence            47899999998765432    112234578899999987654 4688999999999999999999999653211  0000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....    .    ..+.+...                  .....+.+++.+||+.||++||++.+++..
T Consensus       213 ~~~~----~----~~~~~~~~------------------~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         213 LIPK----S----KPPRLEDN------------------GYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             cccc----C----CCCCCCcc------------------cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            0000    0    00000000                  122346789999999999999999999763

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.62  E-value=3.9e-17  Score=110.50  Aligned_cols=120  Identities=20%  Similarity=0.229  Sum_probs=81.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC--CCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS--RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~--~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+|+||||++..+...     ...+.-.|...|+|||.+...  .|+-++|+||+|+.++|+.+|..||.........+.
T Consensus       206 ~vKLCDFGIcGqLv~S-----iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~  280 (361)
T KOG1006|consen  206 DVKLCDFGICGQLVDS-----IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC  280 (361)
T ss_pred             CEeeecccchHhHHHH-----HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH
Confidence            4799999999876542     223445789999999988643  388999999999999999999999966432111122


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+.+..         |.+..+.              ........+..++..|+-.|-+.||+..++++.
T Consensus       281 ~Vv~gdp---------p~l~~~~--------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  281 QVVIGDP---------PILLFDK--------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHHcCCC---------CeecCcc--------------cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            2111111         1111111              001234457788899999999999999988653

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.62  E-value=1.1e-15  Score=108.61  Aligned_cols=112  Identities=19%  Similarity=0.248  Sum_probs=74.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||++......        ....++..|++||++.   ...++.++|+||||++++++++|+.||.+.....  .
T Consensus       153 ~~kL~dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--~  222 (307)
T cd06607         153 TVKLADFGSASLVSPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--A  222 (307)
T ss_pred             CEEEeecCcceecCCC--------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--H
Confidence            4789999998764321        1235678899999874   3457889999999999999999999985432110  0


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...+..               ...+..           ........+.+++.+||+.+|++||++.+++..
T Consensus       223 ~~~~~~---------------~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         223 LYHIAQ---------------NDSPTL-----------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHhc---------------CCCCCC-----------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            000000               000000           000223457789999999999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.62  E-value=4.4e-16  Score=109.06  Aligned_cols=110  Identities=20%  Similarity=0.267  Sum_probs=73.0

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHH-hCCCCCccccccCcchHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETF-TGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~-~g~~p~~~~~~~~~~~~~   80 (163)
                      +|++|||++......        ....++..|++||.+.+ ..++.++|+||||++++|++ .|..||.......  ...
T Consensus       163 ~kl~d~g~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~  232 (274)
T cd05076         163 IKLSDPGVSFTALSR--------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KER  232 (274)
T ss_pred             eeecCCccccccccc--------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHH
Confidence            688999987543211        12346778999998865 45889999999999999985 6888886532111  111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ..            .....  .+.               .....+.+++.+||+.+|++|||+.++++.|+
T Consensus       233 ~~------------~~~~~--~~~---------------~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         233 FY------------EKKHR--LPE---------------PSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HH------------HhccC--CCC---------------CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            10            00000  000               01124678999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.62  E-value=5.6e-16  Score=109.50  Aligned_cols=117  Identities=18%  Similarity=0.250  Sum_probs=77.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......    .......|+..|+|||...+..++.++|+||||++++++++|+.||......  .....
T Consensus       156 ~~kL~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~  229 (292)
T cd06658         156 RIKLSDFGFCAQVSKEV----PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRR  229 (292)
T ss_pred             CEEEccCcchhhccccc----ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            47899999987653321    1112245788999999988777889999999999999999999998642110  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +        ...+.+.+....                 .....+..++.+||..||.+|||++++++.
T Consensus       230 ~--------~~~~~~~~~~~~-----------------~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         230 I--------RDNLPPRVKDSH-----------------KVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             H--------HhcCCCcccccc-----------------ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            0        001111110000                 112235678889999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.62  E-value=9.5e-17  Score=114.67  Aligned_cols=110  Identities=21%  Similarity=0.299  Sum_probs=73.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|++||.+.+..++.++|+|||||+++++++|+.||......  .....
T Consensus       136 ~~kL~Dfg~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~  209 (318)
T cd05582         136 HIKLTDFGLSKESIDH----EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--ETMTM  209 (318)
T ss_pred             cEEEeeccCCcccCCC----CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--HHHHH
Confidence            4789999998765322    11122346899999999998878889999999999999999999999653111  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                      +           .....  ..+.               .....+.+++.+||+.||++|||+.+
T Consensus       210 i-----------~~~~~--~~p~---------------~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         210 I-----------LKAKL--GMPQ---------------FLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             H-----------HcCCC--CCCC---------------CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            0           00000  0000               11233567889999999999999654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.62  E-value=4.4e-16  Score=109.27  Aligned_cols=138  Identities=20%  Similarity=0.176  Sum_probs=76.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||+++.......    ......++..|++||++.+. .++.++|+||||++++++++|+.||....... ....
T Consensus       137 ~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~  211 (283)
T cd07835         137 ALKLADFGLARAFGVPVR----TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFR  211 (283)
T ss_pred             cEEEeecccccccCCCcc----ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            478999999976533211    11223457789999987654 46888999999999999999999986532111 1111


Q ss_pred             HHHhcC-ch--hhhhh-hccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNAL-PE--QISEV-LDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~-~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...... +.  .+... ..+......+.......    ..........+.+++.+||+.||++|||++++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         212 IFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL----SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHhCCCChHHhhhhhhchhhhhhcccccccch----hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            110000 00  00000 00000000000000000    0001112245678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.62  E-value=2.6e-16  Score=120.12  Aligned_cols=121  Identities=18%  Similarity=0.166  Sum_probs=81.5

Q ss_pred             eeecccccccccCccccC-C----CcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCcccccc
Q 031224            3 AHVGDFGLTRFIPEAIRS-N----QSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~-~----~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      -||||||-+.-....... .    ........-|+.|++||++.   +...++|+|||++||++|-+.....||++..  
T Consensus       185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--  262 (738)
T KOG1989|consen  185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--  262 (738)
T ss_pred             EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc--
Confidence            589999998753222110 0    00111123478899999874   4458999999999999999999999996531  


Q ss_pred             CcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           75 GLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                        .+..             ++.......               .+.....+..|++.||+.||++||++-+|+..+..++
T Consensus       263 --~laI-------------lng~Y~~P~---------------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~  312 (738)
T KOG1989|consen  263 --KLAI-------------LNGNYSFPP---------------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA  312 (738)
T ss_pred             --ceeE-------------EeccccCCC---------------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence              1110             011110000               0144566888999999999999999999999988876


Q ss_pred             H
Q 031224          155 S  155 (163)
Q Consensus       155 ~  155 (163)
                      .
T Consensus       313 ~  313 (738)
T KOG1989|consen  313 N  313 (738)
T ss_pred             c
Confidence            4

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.62  E-value=6.2e-16  Score=122.34  Aligned_cols=91  Identities=21%  Similarity=0.266  Sum_probs=61.7

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCC
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEG  107 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (163)
                      ..||++|+|||++.+..++.++|||||||+++|++++..|+.....   ........        .+.+..         
T Consensus       175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~--------~~~~~~---------  234 (793)
T PLN00181        175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHR--------VLPPQI---------  234 (793)
T ss_pred             cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHh--------hcChhh---------
Confidence            4578899999999888899999999999999999998877643110   00000000        000000         


Q ss_pred             chhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224          108 TAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                                 .........++.+||+.+|.+|||+.|+++.
T Consensus       235 -----------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        235 -----------LLNWPKEASFCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             -----------hhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence                       0011223467788999999999999999753

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.62  E-value=7.2e-16  Score=108.80  Aligned_cols=66  Identities=29%  Similarity=0.357  Sum_probs=50.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.......    ......++..|++||.+.+.. ++.++|+||+|++++++++|..||...
T Consensus       144 ~~~l~d~g~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~  210 (293)
T cd07843         144 ILKICDFGLAREYGSPLK----PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK  210 (293)
T ss_pred             cEEEeecCceeeccCCcc----ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            478999999887644211    112234677899999886644 678899999999999999999998653

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.62  E-value=5.1e-16  Score=109.00  Aligned_cols=65  Identities=28%  Similarity=0.378  Sum_probs=49.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||++........    ......++..|++||...+.. ++.++|+||||++++++++|+.||..
T Consensus       138 ~~~l~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~  203 (284)
T cd07860         138 AIKLADFGLARAFGVPVR----TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG  203 (284)
T ss_pred             CEEEeeccchhhcccCcc----ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            478999999876543211    112234677899999876654 57889999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.62  E-value=5.6e-17  Score=123.47  Aligned_cols=119  Identities=23%  Similarity=0.327  Sum_probs=85.5

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~   79 (163)
                      ++++|+|||+++.+..+..+... .....||-+|+|||.+....-+..+||+|+||+++.+++ |..||.+...++....
T Consensus       648 ~ra~iSDfglsKkl~~~~sS~~r-~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl  726 (903)
T KOG1027|consen  648 LRAKISDFGLSKKLAGGKSSFSR-LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL  726 (903)
T ss_pred             eeEEecccccccccCCCcchhhc-ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh
Confidence            36899999999999877555444 566789999999999988777778999999999998887 5899977544432222


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .-.....  .    +.+     .                .++  ...+|+.++++.+|..||+|.+|+.+
T Consensus       727 ~~~~~L~--~----L~~-----~----------------~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  727 TGNYTLV--H----LEP-----L----------------PDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             cCcccee--e----ecc-----C----------------chH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            1111000  0    000     0                011  45789999999999999999999754

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=4.1e-16  Score=108.17  Aligned_cols=119  Identities=24%  Similarity=0.383  Sum_probs=78.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++.+......   ......++..|++||.+.+..++.++|+||+|++++++++ |+.||.+....  ....
T Consensus       141 ~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~  215 (261)
T cd05034         141 VCKIADFGLARLIEDDEYT---AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLE  215 (261)
T ss_pred             CEEECccccceeccchhhh---hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            4789999998876432110   0111223567999999887778899999999999999998 99998543111  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+....            ....+.               .....+.+++.+||+.+|.+||++.++.+.|+.
T Consensus       216 ~~~~~~------------~~~~~~---------------~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         216 QVERGY------------RMPRPP---------------NCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHcCC------------CCCCCC---------------CCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            110000            000000               112346789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.62  E-value=4.5e-16  Score=110.07  Aligned_cols=117  Identities=19%  Similarity=0.234  Sum_probs=75.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC----CccccceehhhHHHHHHHhCCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR----VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~----~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~   77 (163)
                      .+||+|||++..+.....     .....++..|++||.+....    ++.++|+||||++++++++|+.||.......  
T Consensus       153 ~~kL~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--  225 (296)
T cd06618         153 NVKLCDFGISGRLVDSKA-----KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF--  225 (296)
T ss_pred             CEEECccccchhccCCCc-----ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH--
Confidence            478999999876543211     11224677899999886543    7788999999999999999999985421110  


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                        ....        ..+..... ..+.    .         ......+.+++.+||+.||.+||++.+++..
T Consensus       226 --~~~~--------~~~~~~~~-~~~~----~---------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         226 --EVLT--------KILQEEPP-SLPP----N---------EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             --HHHH--------HHhcCCCC-CCCC----C---------CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence              0010        01110000 0000    0         0122346788999999999999999999764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.61  E-value=4.4e-16  Score=107.79  Aligned_cols=120  Identities=21%  Similarity=0.317  Sum_probs=77.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-CCCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||.+......    ........++..|+|||.+. +..++.++|+||+|++++++++|..||......  ....
T Consensus       136 ~~~l~Dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~  209 (260)
T PF00069_consen  136 EVKLIDFGSSVKLSEN----NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLE  209 (260)
T ss_dssp             EEEESSGTTTEESTST----TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHH
T ss_pred             cccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhh
Confidence            4689999998764111    12223356788999999987 667889999999999999999999999754110  0011


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....    ...........                 .......+.+++.+||+.||++|||+.++++
T Consensus       210 ~~~~~----~~~~~~~~~~~-----------------~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  210 IIEKI----LKRPLPSSSQQ-----------------SREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHH----HHTHHHHHTTS-----------------HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             hhhhc----ccccccccccc-----------------cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11000    00000000000                 0001256788999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.61  E-value=6.9e-16  Score=106.71  Aligned_cols=114  Identities=24%  Similarity=0.315  Sum_probs=76.5

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFV   82 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~   82 (163)
                      +|++|||.+........    ......|+..|+|||......++.++|+||||++++++++|..||.....     ...+
T Consensus       141 ~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~  211 (257)
T cd08225         141 AKLGDFGIARQLNDSME----LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----HQLV  211 (257)
T ss_pred             EEecccccchhccCCcc----cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHH
Confidence            58999999876643211    11123578889999998777788999999999999999999999854311     1111


Q ss_pred             HhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           83 KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...        .........+                .....+.+++.+||..+|++|||+.++++.
T Consensus       212 ~~~--------~~~~~~~~~~----------------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         212 LKI--------CQGYFAPISP----------------NFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHH--------hcccCCCCCC----------------CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            111        1110000000                112346788999999999999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.61  E-value=6.4e-16  Score=114.80  Aligned_cols=109  Identities=17%  Similarity=0.107  Sum_probs=77.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      +++|+|||.++.....       ...-+-|..|.|||++....|++++|+||+|+++++|++|+.||.....+    .+.
T Consensus       454 ~lrltyFG~a~~~~~~-------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei  522 (612)
T KOG0603|consen  454 HLRLTYFGFWSELERS-------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEI  522 (612)
T ss_pred             cEEEEEechhhhCchh-------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHH
Confidence            4799999999876432       11224577899999999888999999999999999999999999764333    111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..+.......                           ........+|+.+||+.||.+|+++.++..
T Consensus       523 ~~~i~~~~~s---------------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  523 HTRIQMPKFS---------------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHhhcCCccc---------------------------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            1110000000                           022334567889999999999999999864

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.61  E-value=4.4e-16  Score=111.39  Aligned_cols=109  Identities=20%  Similarity=0.217  Sum_probs=73.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|++.|+|||.+.+..++.++|+|||||+++++++|..||.....     ...
T Consensus       134 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~  204 (321)
T cd05603         134 HVVLTDFGLCKEGVEP----EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQM  204 (321)
T ss_pred             CEEEccCCCCccCCCC----CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHH
Confidence            4799999998753221    1112235689999999999888899999999999999999999999965311     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS  144 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  144 (163)
                      ...        ..........                 .....+.+++.+||+.||.+|+++.
T Consensus       205 ~~~--------i~~~~~~~~~-----------------~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         205 YDN--------ILHKPLQLPG-----------------GKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHH--------HhcCCCCCCC-----------------CCCHHHHHHHHHHccCCHhhcCCCC
Confidence            100        0000000000                 1123456789999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.61  E-value=8.2e-16  Score=109.34  Aligned_cols=140  Identities=16%  Similarity=0.121  Sum_probs=77.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......    .......++..|++||.+.+. .++.++|+||+|++++++++|..||......  ....
T Consensus       146 ~~kL~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~--~~~~  219 (309)
T cd07845         146 CLKIADFGLARTYGLPA----KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI--EQLD  219 (309)
T ss_pred             CEEECccceeeecCCcc----CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence            47899999998764321    111122346789999988654 4788999999999999999999999653221  1111


Q ss_pred             HHHhcCch---hhhhhhccccc-cCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPE---QISEVLDPLFV-TGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+......   .....+..... ..... ....... ...........+.+++.+||+.||++|||+.+++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         220 LIIQLLGTPNESIWPGFSDLPLVGKFTL-PKQPYNN-LKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             HHHHhcCCCChhhchhhhcccccccccc-cCCCCCc-hHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            11111100   00000000000 00000 0000000 000011123446789999999999999999998853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.61  E-value=9.5e-16  Score=108.38  Aligned_cols=138  Identities=16%  Similarity=0.071  Sum_probs=77.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||+++......    .......++..|++||.+.+. .++.++|+|||||+++++++|..+|......  ....
T Consensus       140 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~--~~~~  213 (298)
T cd07841         140 VLKLADFGLARSFGSPN----RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI--DQLG  213 (298)
T ss_pred             CEEEccceeeeeccCCC----ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH--HHHH
Confidence            47899999998764321    111223457789999987553 4788899999999999999997777543211  1111


Q ss_pred             HHHhcCc----hhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALP----EQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .......    ..+................    ..............+.+++.+||+.||++|||+.++++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         214 KIFEALGTPTEENWPGVTSLPDYVEFKPFP----PTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             HHHHHcCCCchhhhhhcccccccccccccC----CcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            1111110    0000000000000000000    000001111224567889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.61  E-value=1.2e-15  Score=107.14  Aligned_cols=142  Identities=16%  Similarity=0.138  Sum_probs=79.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||++........   .......++..|++||.+.+.. ++.++|+||+|++++++++|..+|...... ..+..
T Consensus       137 ~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~  212 (286)
T cd07832         137 VLKIADFGLARLFSEEEP---RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAI  212 (286)
T ss_pred             cEEEeeeeecccccCCCC---CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHH
Confidence            468999999887643211   1122345788999999876544 688999999999999999997777542211 01111


Q ss_pred             HHHhc---CchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNA---LPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .....   ....+....+.............  .........+....+.+++.+||+.+|.+|||+++++..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         213 VFRTLGTPNEETWPGLTSLPDYNKITFPESK--PIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             HHHHcCCCChHHHhhccCcchhhcccCCCCC--cchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            11000   00011110000000000000000  000001111223667889999999999999999999763

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.61  E-value=7.1e-16  Score=108.98  Aligned_cols=117  Identities=17%  Similarity=0.210  Sum_probs=77.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++........    ......++..|++||.+....++.++|+||||++++++++|+.||........ ... 
T Consensus       153 ~~kL~dfg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~-  226 (293)
T cd06647         153 SVKLTDFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYL-  226 (293)
T ss_pred             CEEEccCcceeccccccc----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eee-
Confidence            478999998876543211    11223578889999998777788999999999999999999999965322110 000 


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...  .      .+.+  ..               .......+.+++.+||..+|++||++.+++.+
T Consensus       227 ~~~~--~------~~~~--~~---------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         227 IATN--G------TPEL--QN---------------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             hhcC--C------CCCC--CC---------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0000  0      0000  00               00112345678899999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.61  E-value=2.2e-16  Score=113.13  Aligned_cols=110  Identities=19%  Similarity=0.172  Sum_probs=73.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+|||||+++++++|..||.....     ...
T Consensus       134 ~~kL~DfG~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~  204 (325)
T cd05604         134 HVVLTDFGLCKEGIAQ----SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEM  204 (325)
T ss_pred             CEEEeecCCcccCCCC----CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHH
Confidence            4799999998754221    1112335689999999999888899999999999999999999999965311     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                      ...        ......... +                .....+.+++.+|++.+|.+||++.+
T Consensus       205 ~~~--------~~~~~~~~~-~----------------~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         205 YDN--------ILHKPLVLR-P----------------GASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHH--------HHcCCccCC-C----------------CCCHHHHHHHHHHhccCHHhcCCCCC
Confidence            100        011000000 0                11233567899999999999999853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.61  E-value=1.9e-15  Score=104.91  Aligned_cols=121  Identities=24%  Similarity=0.345  Sum_probs=76.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC---CccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR---VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~---~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||++..................++..|++||++....   ++.++|+||||++++++++|..||...... ...
T Consensus       137 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~  215 (264)
T cd06626         137 VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQI  215 (264)
T ss_pred             CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHH
Confidence            4789999998876443211111011245678899999987655   788999999999999999999999643211 000


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...+...        ..+.+...                 ......+.+++.+||+.+|.+|||+.+++.
T Consensus       216 ~~~~~~~--------~~~~~~~~-----------------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         216 MFHVGAG--------HKPPIPDS-----------------LQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHhcC--------CCCCCCcc-----------------cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0000000        00000000                 011233567889999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.61  E-value=2.2e-15  Score=105.98  Aligned_cols=116  Identities=17%  Similarity=0.253  Sum_probs=74.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC------CccccceehhhHHHHHHHhCCCCCccccccC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR------VSTYGDVYSYGILLLETFTGKRPTSDIFAEG   75 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~------~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~   75 (163)
                      .+||+|||++..+....      .....++..|++||.+.+..      ++.++|+|||||+++++++|+.||...... 
T Consensus       141 ~~~l~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-  213 (286)
T cd06622         141 QVKLCDFGVSGNLVASL------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-  213 (286)
T ss_pred             CEEEeecCCcccccCCc------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-
Confidence            47899999987653221      11235777899999875432      477899999999999999999999542111 


Q ss_pred             cchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           76 LDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                       ......        ......    ....            ........+.+++.+||+.+|++||++.+++..
T Consensus       214 -~~~~~~--------~~~~~~----~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         214 -NIFAQL--------SAIVDG----DPPT------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             -hHHHHH--------HHHhhc----CCCC------------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence             000000        000000    0000            000223445678999999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.61  E-value=3.2e-15  Score=106.36  Aligned_cols=63  Identities=25%  Similarity=0.484  Sum_probs=50.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||++.......      .....|+..|++||.+.+..++.++|+||||++++++++|..||..
T Consensus       138 ~~~l~dfg~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~  200 (308)
T cd06615         138 EIKLCDFGVSGQLIDSM------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP  200 (308)
T ss_pred             cEEEccCCCcccccccc------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            47899999987653221      1234678899999998777788999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.61  E-value=7.2e-16  Score=121.28  Aligned_cols=127  Identities=20%  Similarity=0.285  Sum_probs=80.0

Q ss_pred             ceeecccccccccCcccc--------------CCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCC
Q 031224            2 TAHVGDFGLTRFIPEAIR--------------SNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRP   67 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p   67 (163)
                      .+||+|||+++.......              ..........|++.|+|||.+.+..++.++|+||+||+++++++|..|
T Consensus       151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            478999999987621100              000111224689999999999888899999999999999999999999


Q ss_pred             CccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-HHHH
Q 031224           68 TSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-ISDV  146 (163)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-~~~v  146 (163)
                      |.......  ....  ...       .++.....                .......+.+++.+|++.||++|++ ++++
T Consensus       231 F~~~~~~k--i~~~--~~i-------~~P~~~~p----------------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        231 YRRKKGRK--ISYR--DVI-------LSPIEVAP----------------YREIPPFLSQIAMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             CCCcchhh--hhhh--hhc-------cChhhccc----------------cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            96522111  0000  000       00000000                0012234567889999999999965 6667


Q ss_pred             HHHHHHhHH
Q 031224          147 VNNLQKVKS  155 (163)
Q Consensus       147 ~~~l~~~~~  155 (163)
                      .+.|+....
T Consensus       284 l~~Le~~lq  292 (932)
T PRK13184        284 KQDLEPHLQ  292 (932)
T ss_pred             HHHHHHHHh
Confidence            777766543

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.60  E-value=5e-16  Score=109.33  Aligned_cols=116  Identities=19%  Similarity=0.272  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||++.......    .......|+..|++||.+.+..++.++|+||||++++++++|+.||......  .....
T Consensus       153 ~~~l~d~g~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~  226 (285)
T cd06648         153 RVKLSDFGFCAQVSKEV----PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKR  226 (285)
T ss_pred             cEEEcccccchhhccCC----cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHH
Confidence            47899999887553321    1112245788999999988778899999999999999999999998642110  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +.        ....+.+...                 ......+.+++.+||+.+|++|||+.++++
T Consensus       227 ~~--------~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         227 IR--------DNLPPKLKNL-----------------HKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HH--------hcCCCCCccc-----------------ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            00        0000000000                 011234678999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=1.3e-15  Score=111.60  Aligned_cols=111  Identities=17%  Similarity=0.305  Sum_probs=81.1

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCc-cccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVS-TYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~-~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      +|+.|||++-.+..+     ......||+..|.|||++.+..|+ +++||||+|+++|-+..|+.||...++.+ .+...
T Consensus       158 VKLTDFGFSNkf~PG-----~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-TLTmI  231 (864)
T KOG4717|consen  158 VKLTDFGFSNKFQPG-----KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-TLTMI  231 (864)
T ss_pred             eEeeeccccccCCCc-----chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-hhhhh
Confidence            799999999876543     334557899999999999999886 66899999999999999999998765433 22222


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....+.              .            +   .-...+.-+|+..||..||.+|.|.++|..
T Consensus       232 mDCKYt--------------v------------P---shvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  232 MDCKYT--------------V------------P---SHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             hccccc--------------C------------c---hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            211110              0            0   012233567888999999999999998864

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.60  E-value=1.1e-15  Score=105.55  Aligned_cols=117  Identities=27%  Similarity=0.468  Sum_probs=76.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||+++...........   ...++..|++||.+....++.++|+||+|++++++++ |..||......  ....
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~~  215 (258)
T smart00219      141 VVKISDFGLSRDLYDDDYYKKK---GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVLE  215 (258)
T ss_pred             eEEEcccCCceecccccccccc---cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            4789999999876443111110   1225678999999877778999999999999999998 77887542110  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .+..           ........                .....+.+++.+||..||.+|||+.++++.|
T Consensus       216 ~~~~-----------~~~~~~~~----------------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      216 YLKK-----------GYRLPKPE----------------NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHhc-----------CCCCCCCC----------------cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            1100           00000000                1233467799999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.60  E-value=1.2e-15  Score=106.46  Aligned_cols=113  Identities=21%  Similarity=0.279  Sum_probs=76.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||+++.....        ....++..|+|||++.+..++.++|+||+|++++++++|..||.............
T Consensus       148 ~~~l~dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~  219 (267)
T PHA03390        148 RIYLCDYGLCKIIGTP--------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESL  219 (267)
T ss_pred             eEEEecCccceecCCC--------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHH
Confidence            4789999998765321        12357889999999988888999999999999999999999997432222111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-HHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-ISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-~~~v~~  148 (163)
                      ....         ..... .                .......+.+++.+||+.+|.+|++ ++++++
T Consensus       220 ~~~~---------~~~~~-~----------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        220 LKRQ---------QKKLP-F----------------IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHhh---------cccCC-c----------------ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            1100         00000 0                0022334678889999999999996 588874

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.60  E-value=9.1e-16  Score=106.23  Aligned_cols=110  Identities=18%  Similarity=0.278  Sum_probs=74.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC--CCccccceehhhHHHHHHHh-CCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS--RVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~--~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||++.....        .....++..|++||++...  .++.++|+||||++++++++ +..||......  ..
T Consensus       146 ~~kl~Dfg~a~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~  215 (259)
T cd05037         146 FIKLSDPGIPITVLS--------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EK  215 (259)
T ss_pred             eEEeCCCCccccccc--------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hH
Confidence            479999999886532        1123456679999998776  68889999999999999998 46666443111  00


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      .....           ..... ..+                 ....+.+++.+||..+|++|||+.++++.|
T Consensus       216 ~~~~~-----------~~~~~-~~~-----------------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         216 ERFYQ-----------DQHRL-PMP-----------------DCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHHh-----------cCCCC-CCC-----------------CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            00000           00000 000                 014567899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.60  E-value=7.2e-16  Score=111.20  Aligned_cols=139  Identities=17%  Similarity=0.232  Sum_probs=77.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++.+...... ........++..|+|||.+.. ..++.++|+|||||+++++++|+.||....... ....
T Consensus       153 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~  230 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSH-KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQL  230 (342)
T ss_pred             eEEECCcccceecCCcccc-ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            3689999998765322111 111122356788999997654 347889999999999999999999996542211 0111


Q ss_pred             HHHhcCch----hhhhh---hccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPE----QISEV---LDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .. ...+.    .....   +.............+.     ..........+.+++.+||+.||.+|||+++++.
T Consensus       231 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         231 IL-ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPL-----RDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HH-HhcCCCChHHhhhhhhhhhhhhhhcccccCCCH-----HHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            11 00000    00000   0000000000000000     0001122345678999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.60  E-value=1.9e-15  Score=106.60  Aligned_cols=66  Identities=23%  Similarity=0.389  Sum_probs=49.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....    ........++..|++||.+.+. .++.++|+||||++++++++|..||...
T Consensus       141 ~~~l~Dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~  207 (291)
T cd07870         141 ELKLADFGLARAKSIP----SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV  207 (291)
T ss_pred             cEEEeccccccccCCC----CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            4799999998764321    1111223467889999988654 4788899999999999999999999654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.59  E-value=1.2e-15  Score=107.39  Aligned_cols=116  Identities=18%  Similarity=0.268  Sum_probs=75.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......    .......++..|++||.+.+..++.++|+||||++++++++|+.||.......  ....
T Consensus       154 ~~~l~d~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~--~~~~  227 (286)
T cd06614         154 SVKLADFGFAAQLTKEK----SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR--ALFL  227 (286)
T ss_pred             CEEECccchhhhhccch----hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence            47899999886553321    11122346778999999887778999999999999999999999985421110  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +...   ..    .+ .    .             ........+.+++.+||+.+|.+|||+.+++.
T Consensus       228 ~~~~---~~----~~-~----~-------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         228 ITTK---GI----PP-L----K-------------NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHhc---CC----CC-C----c-------------chhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            0000   00    00 0    0             00012344678999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=3.2e-16  Score=112.50  Aligned_cols=65  Identities=25%  Similarity=0.380  Sum_probs=50.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....    .......+|+..|+|||++.+.. ++.++|+||+||+++++++|+.||..
T Consensus       134 ~~kl~Dfg~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~  199 (330)
T cd05586         134 HIALCDFGLSKANLTD----NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA  199 (330)
T ss_pred             CEEEecCCcCcCCCCC----CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence            4789999998754322    11122356899999999886544 78899999999999999999999965

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.59  E-value=2.4e-15  Score=104.32  Aligned_cols=118  Identities=22%  Similarity=0.336  Sum_probs=78.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.........    .....++..|++||.+....++.++|+|+||++++++++|+.||......  .....
T Consensus       138 ~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~  211 (264)
T cd06623         138 EVKIADFGISKVLENTLDQ----CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFEL  211 (264)
T ss_pred             CEEEccCccceecccCCCc----ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHH
Confidence            4789999998876432111    11235678899999988777889999999999999999999998654320  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHH-HHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE-SLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...        ..........                .. ....+..++.+||+.+|++|||+.++++.
T Consensus       212 ~~~--------~~~~~~~~~~----------------~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         212 MQA--------ICDGPPPSLP----------------AEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHH--------HhcCCCCCCC----------------cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            100        0000000000                01 23456788999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.59  E-value=1.5e-15  Score=108.76  Aligned_cols=108  Identities=19%  Similarity=0.262  Sum_probs=72.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+..++.++|+||+||+++++++|..||.+....  .....
T Consensus       139 ~ikL~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~  212 (323)
T cd05615         139 HIKIADFGMCKEHMVD----GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQS  212 (323)
T ss_pred             CEEEeccccccccCCC----CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4799999998754221    11122346899999999998888999999999999999999999999653211  01111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                      +           ......  .+.               .....+.+++.+||+.+|.+|++.
T Consensus       213 i-----------~~~~~~--~p~---------------~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         213 I-----------MEHNVS--YPK---------------SLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             H-----------HhCCCC--CCc---------------cCCHHHHHHHHHHcccCHhhCCCC
Confidence            1           000000  000               112345678899999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.59  E-value=1.7e-15  Score=110.36  Aligned_cols=119  Identities=17%  Similarity=0.125  Sum_probs=75.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC----CCccccceehhhHHHHHHHhCCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS----RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~----~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~   77 (163)
                      .+||+|||+++.......   .......|++.|+|||++.+.    .++.++|+|||||+++++++|+.||.....    
T Consensus       180 ~~kL~DfG~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----  252 (370)
T cd05596         180 HLKLADFGTCMKMDANGM---VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----  252 (370)
T ss_pred             CEEEEeccceeeccCCCc---ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH----
Confidence            579999999986543211   112234689999999987643    378899999999999999999999965321    


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCC--CCCHHHHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRE--RMDISDVVNN  149 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~v~~~  149 (163)
                       ....        ....+....-..+..             ......+.+++.+||+.+|.+  |+|+.++++.
T Consensus       253 -~~~~--------~~i~~~~~~~~~~~~-------------~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         253 -VGTY--------SKIMDHKNSLTFPDD-------------IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             -HHHH--------HHHHcCCCcCCCCCc-------------CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence             1000        011110000000000             011234567889999988987  9999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.59  E-value=6.1e-16  Score=111.61  Aligned_cols=134  Identities=18%  Similarity=0.182  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++......       .....++..|++||.+.+. .++.++|+||+|++++++++|+.||.+....  ....
T Consensus       156 ~~kL~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--~~~~  226 (343)
T cd07851         156 ELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--DQLK  226 (343)
T ss_pred             CEEEcccccccccccc-------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHH
Confidence            4789999998865332       1223567889999987653 4778999999999999999999999643211  0011


Q ss_pred             HHHhcCchhhhhhhcccccc-------CCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVT-------GGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+..................       ..+.........    ........+.+++.+||+.||.+|||+.+|+.
T Consensus       227 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         227 RIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKE----VFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHH----HhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            11110100000011000000       000000000000    00112345788999999999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.59  E-value=4.9e-16  Score=111.89  Aligned_cols=64  Identities=34%  Similarity=0.483  Sum_probs=55.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      +++|+|+|+|..++.+.     .....+||.+|||||++.+..|+...|-||+||+++||+.|+.||..
T Consensus       325 hvRISDLGLAvei~~g~-----~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~  388 (591)
T KOG0986|consen  325 HVRISDLGLAVEIPEGK-----PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ  388 (591)
T ss_pred             CeEeeccceEEecCCCC-----ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence            47899999999886642     23345899999999999998899999999999999999999999965

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.59  E-value=1e-15  Score=106.77  Aligned_cols=123  Identities=18%  Similarity=0.205  Sum_probs=71.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-------CCCccccceehhhHHHHHHHh-CCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-------SRVSTYGDVYSYGILLLETFT-GKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-------~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~   73 (163)
                      .+||+|||+++..........  .....++..|+|||++..       ..++.++|+|||||+++++++ |..||.....
T Consensus       138 ~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~  215 (269)
T cd05042         138 SVKIGDYGLALEQYPEDYYIT--KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD  215 (269)
T ss_pred             cEEEeccccccccccchheec--cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence            479999999875432211101  112234667999998632       346788999999999999998 7778754321


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      .. .+...+...    ......+.+..                   .....+..++..|| .||++|||+++|++.|.
T Consensus       216 ~~-~~~~~~~~~----~~~~~~~~~~~-------------------~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         216 EQ-VLKQVVREQ----DIKLPKPQLDL-------------------KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HH-HHHHHhhcc----CccCCCCcccc-------------------cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            10 111111100    00000110000                   11233456777888 59999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.59  E-value=2e-15  Score=105.76  Aligned_cols=115  Identities=18%  Similarity=0.282  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||++..+....    .......++..|++||.+.+..++.++|+||||++++++++|..||......  .....
T Consensus       139 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~  212 (277)
T cd06641         139 EVKLADFGVAGQLTDTQ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVLFL  212 (277)
T ss_pred             CEEEeecccceecccch----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHHHH
Confidence            47899999987653321    1112235678899999988777888999999999999999999998542111  01110


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...    .    .+.+.                   ......+.+++.+||+.+|.+||++.++++.
T Consensus       213 ~~~~----~----~~~~~-------------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         213 IPKN----N----PPTLE-------------------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HhcC----C----CCCCC-------------------cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            0000    0    00000                   0123346678999999999999999999884

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.59  E-value=1.5e-15  Score=106.68  Aligned_cols=115  Identities=15%  Similarity=0.198  Sum_probs=75.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||++.......      .....|+..|++||.... ..++.++|+||+||+++++++|..||.........   
T Consensus       135 ~~~l~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---  205 (279)
T cd05633         135 HVRISDLGLACDFSKKK------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---  205 (279)
T ss_pred             CEEEccCCcceeccccC------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH---
Confidence            47899999987543211      112357889999998764 45788999999999999999999999653221111   


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      .+.....     ..+..+    +               ......+.+++.+||+.||++|+     |+.++++.
T Consensus       206 ~~~~~~~-----~~~~~~----~---------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         206 EIDRMTL-----TVNVEL----P---------------DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHHhh-----cCCcCC----c---------------cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            1100000     000000    0               01223467788999999999999     58888774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.59  E-value=2.9e-15  Score=106.97  Aligned_cols=112  Identities=20%  Similarity=0.209  Sum_probs=73.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||++......        ....|+..|++||.+.   ...++.++|+||||++++++++|+.||......  ..
T Consensus       163 ~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~  232 (317)
T cd06635         163 QVKLADFGSASIASPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SA  232 (317)
T ss_pred             CEEEecCCCccccCCc--------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HH
Confidence            4789999988654321        1235788899999874   345788999999999999999999998542111  00


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...+..           ........               ......+.+++.+||+.+|.+||++.++++.
T Consensus       233 ~~~~~~-----------~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  277 (317)
T cd06635         233 LYHIAQ-----------NESPTLQS---------------NEWSDYFRNFVDSCLQKIPQDRPTSEELLKH  277 (317)
T ss_pred             HHHHHh-----------ccCCCCCC---------------ccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence            000000           00000000               0122346778999999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.59  E-value=1.8e-15  Score=106.66  Aligned_cols=66  Identities=27%  Similarity=0.351  Sum_probs=49.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....    ........++..|+|||++.+. .++.++|+||+|++++++++|+.||.+.
T Consensus       141 ~~kl~dfg~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~  207 (291)
T cd07844         141 ELKLADFGLARAKSVP----SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS  207 (291)
T ss_pred             CEEECccccccccCCC----CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            4799999998754221    1111122457789999987653 4788999999999999999999999653

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.59  E-value=2.4e-15  Score=106.97  Aligned_cols=112  Identities=20%  Similarity=0.255  Sum_probs=73.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .++|+|||++......        ....++..|++||.+.   ...++.++|+||||++++++++|..||.......  .
T Consensus       153 ~~kl~dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~  222 (308)
T cd06634         153 LVKLGDFGSASIMAPA--------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--A  222 (308)
T ss_pred             cEEECCcccceeecCc--------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH--H
Confidence            4789999998764321        1235778899999864   3457889999999999999999999985431110  0


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .......   .     .+...                  .......+.+++.+||+.+|.+||++.++++.
T Consensus       223 ~~~~~~~---~-----~~~~~------------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         223 LYHIAQN---E-----SPALQ------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHHHhhc---C-----CCCcC------------------cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            0000000   0     00000                  00223446789999999999999999998765

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.58  E-value=1.2e-15  Score=109.49  Aligned_cols=137  Identities=17%  Similarity=0.245  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccC-cchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~~~   79 (163)
                      .++|+|||.+......       .....++..|++||.+.+ ..++.++|+||||++++++++|+.||....... ....
T Consensus       146 ~~~l~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~  218 (328)
T cd07856         146 DLKICDFGLARIQDPQ-------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSII  218 (328)
T ss_pred             CEEeCccccccccCCC-------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            4789999998754221       112346778999998765 457889999999999999999999986432100 0000


Q ss_pred             HHHHhcCchhhhh-hhccc---cccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISE-VLDPL---FVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .......+..+.. ..+..   +....+......    ...........+.+++.+||+.+|++|||+++++..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         219 TDLLGTPPDDVINTICSENTLRFVQSLPKREPVP----FSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHhCCCCHHHHHhccchhhHHHHhhccccCCCc----HHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0000000111000 00000   000000000000    000111223457789999999999999999998764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.58  E-value=4.6e-16  Score=111.66  Aligned_cols=118  Identities=16%  Similarity=0.171  Sum_probs=74.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC------CCCCccccceehhhHHHHHHHhCCCCCccccccC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM------GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG   75 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~------~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~   75 (163)
                      .+||+|||++..+......   ......|+..|+|||++.      ...++.++|+|||||+++++++|+.||...... 
T Consensus       140 ~~kL~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-  215 (330)
T cd05601         140 HIKLADFGSAARLTANKMV---NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-  215 (330)
T ss_pred             CEEeccCCCCeECCCCCce---eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-
Confidence            4799999999876432111   112246889999999876      345778999999999999999999999643211 


Q ss_pred             cchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           76 LDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                          ....        ...+.......+..             ......+.+|+..|+. +|.+|||+.+++..
T Consensus       216 ----~~~~--------~i~~~~~~~~~~~~-------------~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         216 ----KTYN--------NIMNFQRFLKFPED-------------PKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             ----HHHH--------HHHcCCCccCCCCC-------------CCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence                0000        00000000000000             0112335678888997 99999999998753

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.58  E-value=4.7e-15  Score=103.53  Aligned_cols=122  Identities=21%  Similarity=0.318  Sum_probs=76.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC--CccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR--VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~--~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .++++|||+++.......  ........|+..|++||......  ++.++|+||||++++++++|..||......    .
T Consensus       146 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~  219 (272)
T cd06629         146 ICKISDFGISKKSDDIYD--NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI----A  219 (272)
T ss_pred             eEEEeecccccccccccc--ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH----H
Confidence            478999999876532211  11122345788899999876544  788999999999999999999998532110    0


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      . ............+....                   .......+.+++.+||..+|++|||+.++++.
T Consensus       220 ~-~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         220 A-MFKLGNKRSAPPIPPDV-------------------SMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             H-HHHhhccccCCcCCccc-------------------cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            0 00000000000000000                   00123446778899999999999999998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.58  E-value=2.6e-15  Score=107.90  Aligned_cols=141  Identities=16%  Similarity=0.124  Sum_probs=77.9

Q ss_pred             ceeecccccccccCcccc----------CCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIR----------SNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .++++|||+++.......          ..........++..|++||.+.+.. ++.++|+||+|++++++++|+.||..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~  236 (335)
T PTZ00024        157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG  236 (335)
T ss_pred             CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            478999999986642100          0011111234577899999887644 68889999999999999999999965


Q ss_pred             ccccCcchHHHHHh----cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHH
Q 031224           71 IFAEGLDLHNFVKN----ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDV  146 (163)
Q Consensus        71 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v  146 (163)
                      .....  ....+..    .....+....+-........    ..+.............+.+++.+||+.+|++|||++++
T Consensus       237 ~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~  310 (335)
T PTZ00024        237 ENEID--QLGRIFELLGTPNEDNWPQAKKLPLYTEFTP----RKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA  310 (335)
T ss_pred             CCHHH--HHHHHHHHhCCCchhhCcchhhcccccccCc----CCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence            42211  1111110    00000100000000000000    00000000111223457789999999999999999999


Q ss_pred             HH
Q 031224          147 VN  148 (163)
Q Consensus       147 ~~  148 (163)
                      +.
T Consensus       311 l~  312 (335)
T PTZ00024        311 LK  312 (335)
T ss_pred             hc
Confidence            85

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.58  E-value=2.6e-15  Score=103.20  Aligned_cols=115  Identities=19%  Similarity=0.250  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||.+........     .....++..|++||.+....++.++|+||||++++++++|..||......  .....
T Consensus       136 ~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~  208 (253)
T cd05122         136 EVKLIDFGLSAQLSDTKA-----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KALFK  208 (253)
T ss_pred             eEEEeecccccccccccc-----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHHHH
Confidence            478999999887643211     12345788899999988777889999999999999999999998643111  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...   ..     .+.+...                 ......+.+++.+||+.||++|||+.++++
T Consensus       209 ~~~---~~-----~~~~~~~-----------------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         209 IAT---NG-----PPGLRNP-----------------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHh---cC-----CCCcCcc-----------------cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            000   00     0000000                 011344678899999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.58  E-value=9.6e-16  Score=105.00  Aligned_cols=65  Identities=25%  Similarity=0.366  Sum_probs=56.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+|||+|+....       ...+.|||+.|+|||++....|+.++|-|+||++++||+.|.+||.+..+
T Consensus       182 ~iKitDFGFAK~v~~-------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~  246 (355)
T KOG0616|consen  182 HIKITDFGFAKRVSG-------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP  246 (355)
T ss_pred             cEEEEeccceEEecC-------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence            379999999998743       23456899999999999999999999999999999999999999977543

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.58  E-value=3e-15  Score=106.01  Aligned_cols=140  Identities=20%  Similarity=0.236  Sum_probs=77.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++........   .......++..|++||.+.+. .++.++|+||+|++++++++|+.||......  ....
T Consensus       154 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~--~~~~  228 (302)
T cd07864         154 QIKLADFGLARLYNSEES---RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL--AQLE  228 (302)
T ss_pred             cEEeCcccccccccCCcc---cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--HHHH
Confidence            479999999987643211   111123456789999987654 4678899999999999999999999643211  1111


Q ss_pred             HHHh----cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKN----ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+..    ..+..+....+............ ...... .........+.+++.+||+.||++|||+++++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         229 LISRLCGSPCPAVWPDVIKLPYFNTMKPKKQ-YRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HHHHHhCCCChhhcccccccccccccccccc-cccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1111    11111111111000000000000 000000 000012345678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.58  E-value=2.4e-15  Score=104.01  Aligned_cols=114  Identities=19%  Similarity=0.271  Sum_probs=75.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++.......     ......|+..|++||.+.... ++.++|+||||++++++++|..||......  ....
T Consensus       140 ~~kl~d~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~--~~~~  212 (258)
T cd06632         140 VVKLADFGMAKQVVEFS-----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV--AAVF  212 (258)
T ss_pred             CEEEccCccceeccccc-----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH--HHHH
Confidence            47899999987654321     112345788899999887666 888999999999999999999998653210  0000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....  ....     +.+.                   ......+.+++.+||+.+|++||++.+++.
T Consensus       213 ~~~~--~~~~-----~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         213 KIGR--SKEL-----PPIP-------------------DHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHh--cccC-----CCcC-------------------CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            0000  0000     0000                   011234567889999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.57  E-value=5.5e-15  Score=103.51  Aligned_cols=137  Identities=20%  Similarity=0.159  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......    ......++..|+|||.+... .++.++|+||||++++++++|..||......  ....
T Consensus       136 ~~~l~d~g~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~  209 (282)
T cd07829         136 VLKLADFGLARAFGIPLR----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--DQLF  209 (282)
T ss_pred             CEEEecCCcccccCCCcc----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHH
Confidence            478999999887643211    11123456789999988766 6788999999999999999999888543211  0000


Q ss_pred             HHHhcC---chhhhhhhccc--cccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNAL---PEQISEVLDPL--FVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+....   .......+...  .....+.......    ..........+.+++.+||+.||++||++++++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         210 KIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDL----EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHHHHhCCCcHHHHHhhcccccccccccccCccch----HHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            000000   00000000000  0000000000000    0011112445788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.57  E-value=6.6e-15  Score=102.44  Aligned_cols=68  Identities=25%  Similarity=0.395  Sum_probs=51.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .++|+|||+++........ ........|+..|++||.+.+..++.++|+||||++++++++|+.||..
T Consensus       144 ~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  211 (265)
T cd06652         144 NVKLGDFGASKRLQTICLS-GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE  211 (265)
T ss_pred             CEEECcCcccccccccccc-ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence            4789999998865321111 1111223578899999998877788999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.57  E-value=6.4e-15  Score=101.65  Aligned_cols=118  Identities=17%  Similarity=0.213  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||.+.........  .......++..|.+||......++.++|+||||++++++++|..||....    .....
T Consensus       139 ~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~  212 (260)
T cd06606         139 VVKLADFGCAKRLGDIETG--EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAA  212 (260)
T ss_pred             CEEEcccccEEeccccccc--ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHH
Confidence            4689999998876543210  01123457888999999887778899999999999999999999986532    11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....        ........+               ......+.+++.+|++.+|++||++.+++.
T Consensus       213 ~~~~~--------~~~~~~~~~---------------~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         213 LYKIG--------SSGEPPEIP---------------EHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHhcc--------ccCCCcCCC---------------cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            11100        000000000               011345678889999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.57  E-value=5e-15  Score=103.95  Aligned_cols=138  Identities=18%  Similarity=0.188  Sum_probs=78.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||+++......    .......++..|++||.+.+. .++.++|+|++|++++++++|+.||.+..... ....
T Consensus       138 ~~~l~d~g~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~  212 (284)
T cd07836         138 ELKLADFGLARAFGIPV----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLK  212 (284)
T ss_pred             cEEEeecchhhhhcCCc----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHH
Confidence            47899999987653321    111223467889999987654 46888999999999999999999986542211 0111


Q ss_pred             HHH---hcCchhhhhhhc-cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVK---NALPEQISEVLD-PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...   ......+....+ +......+......    ...........+.+++.+|++.||.+||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         213 IFRIMGTPTESTWPGISQLPEYKPTFPRYPPQD----LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHHhCCCChhhHHHHhcCchhcccccCCChHH----HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000   001111111000 00000110000000    01111122445678999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.57  E-value=4e-15  Score=104.43  Aligned_cols=115  Identities=15%  Similarity=0.176  Sum_probs=75.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+....      .....|+..|++||.+.+. .++.++|+||+|++++++++|+.||.+..........
T Consensus       135 ~~kl~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~  208 (278)
T cd05606         135 HVRISDLGLACDFSKKK------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID  208 (278)
T ss_pred             CEEEccCcCccccCccC------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH
Confidence            47899999987653211      1124688899999998654 5888999999999999999999999654221110000


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      .....        ....+..                   .....+.+++.+|+..+|.+|+     ++.++++.
T Consensus       209 ~~~~~--------~~~~~~~-------------------~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         209 RMTLT--------MAVELPD-------------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             HHhhc--------cCCCCCC-------------------cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence            00000        0000000                   1123467788999999999999     99998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.57  E-value=8.9e-16  Score=110.87  Aligned_cols=136  Identities=14%  Similarity=0.171  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....       .....++..|+|||.+.+ ..++.++|+||+||+++++++|+.||....... .+..
T Consensus       158 ~~kl~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~  229 (345)
T cd07877         158 ELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKL  229 (345)
T ss_pred             CEEEeccccccccccc-------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            4789999998764321       122457888999998765 357889999999999999999999986432110 1111


Q ss_pred             HHHh--cCchhhhhhhccc----cccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKN--ALPEQISEVLDPL----FVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....  ..+......+...    .....+......    ...........+.+++.+|++.||.+|||+.+++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         230 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN----FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcc----hhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            1000  0000000000000    000000000000    000000123456789999999999999999998764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=2.6e-15  Score=104.16  Aligned_cols=116  Identities=19%  Similarity=0.194  Sum_probs=75.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++....        .....++..|++||.+.+..++.++|+||+|++++++++|..||......  .....
T Consensus       135 ~~~l~dfg~~~~~~~--------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~  204 (260)
T cd05611         135 HLKLTDFGLSRNGLE--------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--AVFDN  204 (260)
T ss_pred             cEEEeecccceeccc--------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHH
Confidence            478999998875422        11234678899999988777889999999999999999999999643211  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ..           ...... ...            ........+.+++.+||+.+|++|||+.++.+.|+
T Consensus       205 ~~-----------~~~~~~-~~~------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         205 IL-----------SRRINW-PEE------------VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             HH-----------hcccCC-CCc------------ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            00           000000 000            00022345678999999999999998765555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=3.2e-15  Score=104.78  Aligned_cols=117  Identities=17%  Similarity=0.265  Sum_probs=74.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .++|+|||++......    ........++..|++||.+.     ...++.++|+||||++++++++|+.||......  
T Consensus       141 ~~~l~d~g~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--  214 (280)
T cd06611         141 DVKLADFGVSAKNKST----LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--  214 (280)
T ss_pred             CEEEccCccchhhccc----ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--
Confidence            4789999988764322    11122345788899999864     234678899999999999999999998653111  


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                         ..........     .+.+.  .+               ......+.+++.+||+.+|++||++.++++.
T Consensus       215 ---~~~~~~~~~~-----~~~~~--~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         215 ---RVLLKILKSE-----PPTLD--QP---------------SKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             ---HHHHHHhcCC-----CCCcC--Cc---------------ccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence               0000000000     00000  00               0122346778999999999999999999765

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.57  E-value=3.2e-15  Score=107.20  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=36.8

Q ss_pred             cccccccCCCCCCC--CCCccccceehhhHHHHHHHhCCCCCccc
Q 031224           29 KGTVGYAPPEYGMG--SRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus        29 ~g~~~y~~pe~~~~--~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .++..|++||++.+  ..++.++|+|||||+++++++|+.||...
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  213 (327)
T cd08227         169 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  213 (327)
T ss_pred             cceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            45677999999865  34889999999999999999999999653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.57  E-value=4.9e-15  Score=108.35  Aligned_cols=44  Identities=30%  Similarity=0.461  Sum_probs=40.1

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||..|+|||++.+..++.++|+|||||+++|+++|..||...
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~  251 (381)
T cd05626         208 LVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAP  251 (381)
T ss_pred             ccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCC
Confidence            46899999999998888999999999999999999999999653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.57  E-value=5.3e-15  Score=105.48  Aligned_cols=112  Identities=20%  Similarity=0.247  Sum_probs=72.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||++.....        .....|+..|++||.+.   ...++.++|+||||++++++++|..||......  ..
T Consensus       159 ~~kL~dfg~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--~~  228 (313)
T cd06633         159 QVKLADFGSASKSSP--------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SA  228 (313)
T ss_pred             CEEEeecCCCcccCC--------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--HH
Confidence            378999998764321        12245788899999874   345788899999999999999999998653211  00


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ......   ...     +....                  ......+.+++.+||+.+|.+||++.+++..
T Consensus       229 ~~~~~~---~~~-----~~~~~------------------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         229 LYHIAQ---NDS-----PTLQS------------------NEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHHh---cCC-----CCCCc------------------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000000   000     00000                  0111235678899999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.56  E-value=6.2e-15  Score=102.29  Aligned_cols=113  Identities=17%  Similarity=0.200  Sum_probs=75.7

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFV   82 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~   82 (163)
                      +||+|||+++.......    ......|+..|++||...+..++.++|+||||++++++++|..||....     .....
T Consensus       144 ~~l~d~g~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~  214 (260)
T cd08222         144 LKIGDFGVSRLLMGSCD----LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVV  214 (260)
T ss_pred             EeecccCceeecCCCcc----cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHH
Confidence            68999999876543211    1112346778999998877778889999999999999999999985321     11111


Q ss_pred             HhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           83 KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...        ....... .               .......+.+++.+||+.+|++||++.++++
T Consensus       215 ~~~--------~~~~~~~-~---------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         215 LRI--------VEGPTPS-L---------------PETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHH--------HcCCCCC-C---------------cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            110        0000000 0               0022345678999999999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.56  E-value=4.4e-15  Score=102.57  Aligned_cols=112  Identities=21%  Similarity=0.213  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+|++|||+++.....      ......++..|++||.+.+..++.++|+||+|++++++++|+.||......  .+...
T Consensus       141 ~~kl~d~g~~~~~~~~------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~  212 (256)
T cd08530         141 LVKIGDLGISKVLKKN------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYK  212 (256)
T ss_pred             cEEEeeccchhhhccC------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4789999998876443      111234678899999998877888999999999999999999998543110  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +..           .    ..+.            ........+.+++.+||+.+|++|||+.++++
T Consensus       213 ~~~-----------~----~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         213 VQR-----------G----KYPP------------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             Hhc-----------C----CCCC------------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            100           0    0000            00022344788999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.56  E-value=5.4e-15  Score=104.51  Aligned_cols=117  Identities=17%  Similarity=0.277  Sum_probs=76.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......    .......|+..|++||......++.++|+||+|++++++++|..||......  .....
T Consensus       154 ~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~  227 (292)
T cd06657         154 RVKLSDFGFCAQVSKEV----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKM  227 (292)
T ss_pred             CEEEcccccceeccccc----ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            47899999887653321    1112245788899999987777889999999999999999999998642110  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +....        ...+...                 ......+.+++.+||+.+|.+||++.+++..
T Consensus       228 ~~~~~--------~~~~~~~-----------------~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         228 IRDNL--------PPKLKNL-----------------HKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HHhhC--------CcccCCc-----------------ccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            11100        0000000                 0112235678899999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=5e-15  Score=105.60  Aligned_cols=93  Identities=22%  Similarity=0.299  Sum_probs=64.4

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCC
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEG  107 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (163)
                      ..|+..|++||++.+..++.++|+||||++++++++|+.||....... .            +....+........    
T Consensus       192 ~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~------------~~~~~~~~~~~~~~----  254 (316)
T cd05574         192 FVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE-T------------FSNILKKEVTFPGS----  254 (316)
T ss_pred             CcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH-H------------HHHHhcCCccCCCc----
Confidence            457888999999988888899999999999999999999996532110 0            11111110000000    


Q ss_pred             chhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC----HHHHHH
Q 031224          108 TAEEKLKQDQVQESLATILKIGVACSVESPRERMD----ISDVVN  148 (163)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps----~~~v~~  148 (163)
                                 ......+.+++.+||+.||++|||    ++++++
T Consensus       255 -----------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         255 -----------PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             -----------cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence                       012345678999999999999999    777776

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.56  E-value=2.7e-15  Score=105.94  Aligned_cols=65  Identities=29%  Similarity=0.348  Sum_probs=49.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||++........    ......++..|++||++.+. .++.++|+||+|++++++++|..||..
T Consensus       141 ~~kl~dfg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~  206 (294)
T PLN00009        141 ALKLADFGLARAFGIPVR----TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG  206 (294)
T ss_pred             EEEEcccccccccCCCcc----ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            378999999976543211    11223567889999987654 478899999999999999999999965

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.56  E-value=5.8e-15  Score=102.54  Aligned_cols=116  Identities=22%  Similarity=0.239  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||+++......     ......++..|++||.+.+..++.++|+||+|++++++++|..||.....+.......
T Consensus       131 ~~~l~df~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  205 (262)
T cd05572         131 YVKLVDFGFAKKLKSGQ-----KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND  205 (262)
T ss_pred             CEEEeeCCcccccCccc-----ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH
Confidence            47899999998764321     1122357888999999877778899999999999999999999996542211111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~  148 (163)
                                 ..........+               ......+..++.+||+.+|++||+     +.|+++
T Consensus       206 -----------~~~~~~~~~~~---------------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         206 -----------ILKGNGKLEFP---------------NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             -----------HhccCCCCCCC---------------cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence                       00000000000               011345788999999999999999     777765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.55  E-value=7e-16  Score=112.84  Aligned_cols=142  Identities=19%  Similarity=0.182  Sum_probs=88.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccc-cCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFA-EGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~-~~~~~~~   80 (163)
                      .+||||||.|.....+.      .+.+.-+.+|.|||++.+.+|+...|+||.||.+||+.+|+..|++... ....+..
T Consensus       575 iLKLCDfGSA~~~~ene------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m  648 (752)
T KOG0670|consen  575 ILKLCDFGSASFASENE------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM  648 (752)
T ss_pred             eeeeccCcccccccccc------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH
Confidence            57999999998765431      1223457799999999999999999999999999999999999976433 2223333


Q ss_pred             HHHhcCchhh-------hhhhccccccCCCCC----------------C-Cchhhhhhh-----HhhHHHHHHHHHHHhh
Q 031224           81 FVKNALPEQI-------SEVLDPLFVTGGEEG----------------E-GTAEEKLKQ-----DQVQESLATILKIGVA  131 (163)
Q Consensus        81 ~~~~~~~~~~-------~~~~~~~~~~~~~~~----------------~-~~~~~~~~~-----~~~~~~~~~~~~l~~~  131 (163)
                      .+.+.++..+       ...||........+.                + ......+..     ......+..+-+|+..
T Consensus       649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdk  728 (752)
T KOG0670|consen  649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDK  728 (752)
T ss_pred             HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHH
Confidence            3333333211       111221111100000                0 001111111     1123445667788999


Q ss_pred             cCCCCcCCCCCHHHHHHH
Q 031224          132 CSVESPRERMDISDVVNN  149 (163)
Q Consensus       132 cl~~dp~~Rps~~~v~~~  149 (163)
                      |+..||++|.|..++|..
T Consensus       729 ml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  729 MLILDPEKRITVNQALKH  746 (752)
T ss_pred             HhccChhhcCCHHHHhcC
Confidence            999999999999988753

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.55  E-value=7e-15  Score=102.81  Aligned_cols=119  Identities=21%  Similarity=0.283  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .++++|||+++........   ......++..|++||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       155 ~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~  229 (275)
T cd05046         155 EVKVSLLSLSKDVYNSEYY---KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLN  229 (275)
T ss_pred             cEEEcccccccccCccccc---ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHH
Confidence            4688999988754321111   1112345677999999887778889999999999999998 77888543111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ...           .........               ......+.+++.+||+.+|.+|||+.+++..|.
T Consensus       230 ~~~-----------~~~~~~~~~---------------~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         230 RLQ-----------AGKLELPVP---------------EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHH-----------cCCcCCCCC---------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            100           000000000               012235678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=2.6e-15  Score=109.63  Aligned_cols=64  Identities=28%  Similarity=0.442  Sum_probs=56.3

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      +||.|||+++.+..+    .+.+ +.|||+.|.|||++.+...+.++|.|++|++++|+++|.+||.+.
T Consensus       559 ~KLVDFGFAKki~~g----~KTw-TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~  622 (732)
T KOG0614|consen  559 LKLVDFGFAKKIGSG----RKTW-TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV  622 (732)
T ss_pred             eEEeehhhHHHhccC----Ccee-eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence            799999999998654    2233 479999999999999988899999999999999999999999874

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.55  E-value=5.7e-15  Score=101.93  Aligned_cols=114  Identities=22%  Similarity=0.330  Sum_probs=76.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......    .......|+..|++||......++.++|+||+|++++++++|..||....     ....
T Consensus       141 ~~~l~d~~~~~~~~~~~----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~  211 (258)
T cd08215         141 LVKLGDFGISKVLSSTV----DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLEL  211 (258)
T ss_pred             cEEECCccceeecccCc----ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHH
Confidence            46899999987654321    11122457888999999887778899999999999999999999985421     1111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ........    ..+     .+.               .....+.+++.+||..+|++|||+.++++
T Consensus       212 ~~~~~~~~----~~~-----~~~---------------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         212 ALKILKGQ----YPP-----IPS---------------QYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHhcCC----CCC-----CCC---------------CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            11100000    000     000               11234677899999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.55  E-value=3.4e-15  Score=116.03  Aligned_cols=117  Identities=15%  Similarity=0.171  Sum_probs=75.2

Q ss_pred             eecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHHH
Q 031224            4 HVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVK   83 (163)
Q Consensus         4 kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~~   83 (163)
                      ++.|||.++.......  .......+||+.|++||++.+..++.++|||||||+++|+++|+.||.+....     ... 
T Consensus       518 ~~~~~~~~~~~~~g~~--~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~-----~~~-  589 (669)
T cd05610         518 IGTPYRTPKSVRRGAA--PVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ-----QVF-  589 (669)
T ss_pred             ccccCCCchhhhcccc--cccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHH-
Confidence            4556777665432211  11123357899999999998888999999999999999999999999653211     111 


Q ss_pred             hcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           84 NALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                             ...+...+.....     .         ......+..++..||..||.+||++.++++.
T Consensus       590 -------~~il~~~~~~p~~-----~---------~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         590 -------QNILNRDIPWPEG-----E---------EKLSVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             -------HHHHhcCCCCCcc-----c---------ccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence                   0111110000000     0         0112335677888999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=5.5e-15  Score=107.42  Aligned_cols=44  Identities=25%  Similarity=0.369  Sum_probs=40.0

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+.|+|||++....++.++|+|||||+++++++|..||...
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~  242 (364)
T cd05599         199 TVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSD  242 (364)
T ss_pred             cccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCC
Confidence            46899999999998888999999999999999999999999653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.55  E-value=8e-15  Score=104.13  Aligned_cols=123  Identities=19%  Similarity=0.188  Sum_probs=74.7

Q ss_pred             ceeecccccccccCcccc-----------CCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIR-----------SNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+|++|||+++.......           ..........++..|++||.+.+..++.++|+||||++++++++|..||.+
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~  218 (305)
T cd05609         139 HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  218 (305)
T ss_pred             CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            478999999874211100           000011123467789999998887889999999999999999999999864


Q ss_pred             ccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           71 IFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      ....     .....        ............              ......+..++.+||+.||++||++.++.+.|
T Consensus       219 ~~~~-----~~~~~--------~~~~~~~~~~~~--------------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll  271 (305)
T cd05609         219 DTPE-----ELFGQ--------VISDDIEWPEGD--------------EALPADAQDLISRLLRQNPLERLGTGGAFEVK  271 (305)
T ss_pred             CCHH-----HHHHH--------HHhcccCCCCcc--------------ccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence            2110     10000        000000000000              01123467899999999999999965555554


Q ss_pred             H
Q 031224          151 Q  151 (163)
Q Consensus       151 ~  151 (163)
                      +
T Consensus       272 ~  272 (305)
T cd05609         272 Q  272 (305)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.54  E-value=7.6e-15  Score=107.36  Aligned_cols=44  Identities=30%  Similarity=0.462  Sum_probs=40.2

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+.|+|||++.+..++.++|+||+||+++|+++|+.||...
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  251 (382)
T cd05625         208 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ  251 (382)
T ss_pred             cccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCC
Confidence            46899999999998888999999999999999999999999653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.53  E-value=1.2e-14  Score=104.34  Aligned_cols=42  Identities=29%  Similarity=0.410  Sum_probs=35.6

Q ss_pred             ccccccCCCCCCCC--CCccccceehhhHHHHHHHhCCCCCccc
Q 031224           30 GTVGYAPPEYGMGS--RVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus        30 g~~~y~~pe~~~~~--~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      ++..|++||++.+.  .++.++|+||+||+++++++|+.||...
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~  213 (328)
T cd08226         170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM  213 (328)
T ss_pred             CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            45569999998663  4788999999999999999999999653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.52  E-value=3.1e-14  Score=103.50  Aligned_cols=44  Identities=27%  Similarity=0.428  Sum_probs=40.4

Q ss_pred             cccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224           27 GLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus        27 ~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      ..+||..|+|||++.+..++.++|+|||||+++|+++|+.||.+
T Consensus       195 ~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             cccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence            35789999999999888899999999999999999999999965

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.52  E-value=1.4e-14  Score=110.97  Aligned_cols=123  Identities=18%  Similarity=0.325  Sum_probs=88.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||.|||+++.+..........  ...-.+.|+|-|.+....|+.++||||||+.+||+++ |..||++....+  .++
T Consensus       836 hvkitdfgla~ll~~d~~ey~~~--~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--I~d  911 (1177)
T KOG1025|consen  836 HVKITDFGLAKLLAPDEKEYSAP--GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--IPD  911 (1177)
T ss_pred             eEEEEecchhhccCccccccccc--ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--hhH
Confidence            47999999999886653333321  1223567999999988899999999999999999998 999997753221  222


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+....  +                         ..+.+.+.-++..++..||..|+..||+++++...+.+...
T Consensus       912 lle~ge--R-------------------------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  912 LLEKGE--R-------------------------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             HHhccc--c-------------------------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            211110  0                         11122455567789999999999999999999998887654

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.52  E-value=1.5e-14  Score=100.31  Aligned_cols=114  Identities=18%  Similarity=0.246  Sum_probs=75.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......     ......|+..|++||.+....++.++|+||+|++++++++|..||......   ....
T Consensus       138 ~~~l~d~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~  209 (258)
T cd05578         138 HVHITDFNIATKVTPDT-----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQ  209 (258)
T ss_pred             CEEEeecccccccCCCc-----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHH
Confidence            47899999987654321     112235778899999988777889999999999999999999998653211   0111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH--HHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI--SDVV  147 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~--~~v~  147 (163)
                      ....... ....+.+                       .....+.+++.+||+.||.+||++  +|++
T Consensus       210 ~~~~~~~-~~~~~~~-----------------------~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         210 IRAKQET-ADVLYPA-----------------------TWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHhcc-ccccCcc-----------------------cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            1000000 0000000                       112456789999999999999999  6654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.52  E-value=1.4e-14  Score=101.57  Aligned_cols=116  Identities=20%  Similarity=0.227  Sum_probs=74.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++......     .......++..|++||++.+..++.++|+||+|++++++++|+.||....... ... .
T Consensus       133 ~~~l~dfg~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~-~  205 (277)
T cd05577         133 NVRISDLGLAVELKGG-----KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKE-E  205 (277)
T ss_pred             CEEEccCcchhhhccC-----CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHH-H
Confidence            4789999998765321     11122356778999999887778899999999999999999999996532211 000 0


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~  148 (163)
                      +.......     ..    ..+               ......+.+++.+||+.||++||     ++.+++.
T Consensus       206 ~~~~~~~~-----~~----~~~---------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         206 LKRRTLEM-----AV----EYP---------------DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHhccccc-----cc----cCC---------------ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            00000000     00    000               01123456789999999999999     6666764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.52  E-value=5.7e-15  Score=106.62  Aligned_cols=135  Identities=17%  Similarity=0.166  Sum_probs=76.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++.....       .....++..|++||.+.+. .++.++|+||+|++++++++|..||.+..... ....
T Consensus       156 ~~kl~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~  227 (343)
T cd07880         156 ELKILDFGLARQTDSE-------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLME  227 (343)
T ss_pred             CEEEeecccccccccC-------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            4789999998765321       1123467889999987653 47888999999999999999999996532110 1111


Q ss_pred             HHHh--cCchhhhhhhccc----cccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKN--ALPEQISEVLDPL----FVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....  ..+..+...+...    .....+......    ...........+.+++.+|++.||++|||+.+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         228 IMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKD----FRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             HHHhcCCCCHHHHHhhcchhHHHHHHhccccCcch----HHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1100  0000111100000    000000000000    00001122334678999999999999999999984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.52  E-value=4.8e-15  Score=102.48  Aligned_cols=64  Identities=25%  Similarity=0.224  Sum_probs=53.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||.|||+++.....     -..+.++.+.+|+|||++.+..+...+||||.||++.||+.|+..|.+
T Consensus       156 ~lKi~dfg~ar~e~~~-----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g  219 (369)
T KOG0665|consen  156 TLKILDFGLARTEDTD-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG  219 (369)
T ss_pred             heeeccchhhcccCcc-----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence            4689999999875432     133456789999999999888899999999999999999999988764

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.52  E-value=1.8e-14  Score=105.10  Aligned_cols=66  Identities=24%  Similarity=0.289  Sum_probs=51.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC----CCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS----RVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~----~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.+....   ........|+..|+|||++...    .++.++|+||+||+++++++|+.||..
T Consensus       180 ~~kL~DFG~a~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~  249 (370)
T cd05621         180 HLKLADFGTCMKMDETG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA  249 (370)
T ss_pred             CEEEEecccceecccCC---ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence            57999999998764321   1111235689999999988653    267899999999999999999999965

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.52  E-value=1e-14  Score=111.25  Aligned_cols=133  Identities=13%  Similarity=0.112  Sum_probs=72.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC----------------------CCccccceehhhHHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS----------------------RVSTYGDVYSYGILLL   59 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~----------------------~~~~~~di~s~g~~~~   59 (163)
                      .+||+|||+++.+......   ......+++.|+|||.+...                      .++.++||||+||+++
T Consensus       294 ~~KL~DFGlA~~l~~~~~~---~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~  370 (566)
T PLN03225        294 SFKIIDLGAAADLRVGINY---IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFL  370 (566)
T ss_pred             cEEEEeCCCcccccccccc---CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHH
Confidence            5799999999865432111   12345688999999954321                      2345669999999999


Q ss_pred             HHHhCCCCCccccccCcchHHHHHhc-Cc-hhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCc
Q 031224           60 ETFTGKRPTSDIFAEGLDLHNFVKNA-LP-EQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESP  137 (163)
Q Consensus        60 e~~~g~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp  137 (163)
                      |++++..++....   ..+...+... .. ..+...+.+........       .  ............+|+.+||+.||
T Consensus       371 el~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~d~~~~~~~dLi~~mL~~dP  438 (566)
T PLN03225        371 QMAFPNLRSDSNL---IQFNRQLKRNDYDLVAWRKLVEPRASPDLRR-------G--FEVLDLDGGAGWELLKSMMRFKG  438 (566)
T ss_pred             HHHhCcCCCchHH---HHHHHHHHhcCCcHHHHHHhhccccchhhhh-------h--hhhccccchHHHHHHHHHccCCc
Confidence            9998765543210   0111111100 00 01111111110000000       0  00000112234579999999999


Q ss_pred             CCCCCHHHHHHH
Q 031224          138 RERMDISDVVNN  149 (163)
Q Consensus       138 ~~Rps~~~v~~~  149 (163)
                      .+|||+.++++.
T Consensus       439 ~kR~ta~e~L~H  450 (566)
T PLN03225        439 RQRISAKAALAH  450 (566)
T ss_pred             ccCCCHHHHhCC
Confidence            999999999874

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.52  E-value=8.5e-15  Score=115.61  Aligned_cols=120  Identities=23%  Similarity=0.320  Sum_probs=75.2

Q ss_pred             ceeecccccccccCc-------------c-ccCCCcccccccccccccCCCCCCCC---CCccccceehhhHHHHHHHhC
Q 031224            2 TAHVGDFGLTRFIPE-------------A-IRSNQSSSIGLKGTVGYAPPEYGMGS---RVSTYGDVYSYGILLLETFTG   64 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~-------------~-~~~~~~~~~~~~g~~~y~~pe~~~~~---~~~~~~di~s~g~~~~e~~~g   64 (163)
                      .|||+|||++.....             . ........+..+||-.|+|||++.+.   .|+.|+|+||+|++++||+. 
T Consensus       735 ~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y-  813 (1351)
T KOG1035|consen  735 SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY-  813 (1351)
T ss_pred             CeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc-
Confidence            589999999987310             0 11122244667899999999998654   49999999999999999975 


Q ss_pred             CCCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH
Q 031224           65 KRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS  144 (163)
Q Consensus        65 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  144 (163)
                        ||...    +.....+...-...++.. ...                    .......-.+++.++++.||++||||.
T Consensus       814 --PF~Ts----MERa~iL~~LR~g~iP~~-~~f--------------------~~~~~~~e~slI~~Ll~hdP~kRPtA~  866 (1351)
T KOG1035|consen  814 --PFGTS----MERASILTNLRKGSIPEP-ADF--------------------FDPEHPEEASLIRWLLSHDPSKRPTAT  866 (1351)
T ss_pred             --cCCch----HHHHHHHHhcccCCCCCC-ccc--------------------ccccchHHHHHHHHHhcCCCccCCCHH
Confidence              35332    122222211111111111 000                    001122235688899999999999999


Q ss_pred             HHHHH
Q 031224          145 DVVNN  149 (163)
Q Consensus       145 ~v~~~  149 (163)
                      |+++.
T Consensus       867 eLL~s  871 (1351)
T KOG1035|consen  867 ELLNS  871 (1351)
T ss_pred             HHhhc
Confidence            99863

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=3.6e-14  Score=98.73  Aligned_cols=117  Identities=19%  Similarity=0.210  Sum_probs=74.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||+++........ ........++..|++||.+.+..++.++|+||||++++++++|+.||......    .. 
T Consensus       144 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~-  217 (264)
T cd06653         144 NVKLGDFGASKRIQTICMS-GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AA-  217 (264)
T ss_pred             CEEECcccccccccccccc-CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HH-
Confidence            4789999999865321100 11112345788899999988877889999999999999999999999642110    00 


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +.......    ..+.+.                   ......+.+++.+||+ ++..|||+.+++.
T Consensus       218 ~~~~~~~~----~~~~~p-------------------~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         218 IFKIATQP----TKPMLP-------------------DGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHHcCC----CCCCCC-------------------cccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            00000000    000000                   0223446778889999 5699999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.51  E-value=6.1e-15  Score=107.64  Aligned_cols=44  Identities=30%  Similarity=0.447  Sum_probs=40.2

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+|+..|+|||++.+..++.++|+|||||+++++++|+.||...
T Consensus       204 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~  247 (376)
T cd05598         204 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAD  247 (376)
T ss_pred             cCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCC
Confidence            46899999999998888999999999999999999999999653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=2.3e-14  Score=102.77  Aligned_cols=66  Identities=23%  Similarity=0.345  Sum_probs=56.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.-.-    ........+||+-|+|||++...+|+.++|-||||++++|++.|+.||++.
T Consensus       488 HiKi~DFGmcKEni~----~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe  553 (683)
T KOG0696|consen  488 HIKIADFGMCKENIF----DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE  553 (683)
T ss_pred             ceEeeeccccccccc----CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence            479999999985321    233445689999999999999999999999999999999999999999875

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.51  E-value=2.7e-14  Score=104.20  Aligned_cols=66  Identities=23%  Similarity=0.263  Sum_probs=51.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC----CCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS----RVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~----~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.+....   ........|++.|+|||++.+.    .++.++|+||+||+++++++|+.||..
T Consensus       180 ~ikL~DfG~a~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  249 (371)
T cd05622         180 HLKLADFGTCMKMNKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA  249 (371)
T ss_pred             CEEEEeCCceeEcCcCC---cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence            47999999998764321   1112235689999999998653    277899999999999999999999965

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.51  E-value=2.6e-14  Score=102.27  Aligned_cols=112  Identities=23%  Similarity=0.332  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      ++||+|||++-.+..     ......+||++.|..||++.+.+| .+.+|.||+|+++|.+..|..||++.     +...
T Consensus       191 NiKIADFGLSNly~~-----~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~  260 (668)
T KOG0611|consen  191 NIKIADFGLSNLYAD-----KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKR  260 (668)
T ss_pred             Ceeeeccchhhhhcc-----ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHH
Confidence            579999999977633     445567899999999999999887 47799999999999999999999763     2222


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+..-..+.+.+   +                       ..+.....|++++|..+|+.|.|.++|...
T Consensus       261 lvrQIs~GaYrE---P-----------------------~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  261 LVRQISRGAYRE---P-----------------------ETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             HHHHhhcccccC---C-----------------------CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence            221111111111   0                       111123457788889999999999998653

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.50  E-value=1.8e-14  Score=104.17  Aligned_cols=135  Identities=18%  Similarity=0.223  Sum_probs=82.7

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-Cc-----cccceehhhHHHHHHHhCCCCCcccccc
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VS-----TYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~-----~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      +++.|+|||+|..+.....  .......+||..|||||++.+.. +.     .+.||||+|.++||++++...++.-...
T Consensus       353 lTccIaDFGLAl~~~p~~~--~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp  430 (534)
T KOG3653|consen  353 LTCCIADFGLALRLEPGKP--QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVP  430 (534)
T ss_pred             CcEEeeccceeEEecCCCC--CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Confidence            4678999999998864322  12223478999999999987643 22     3479999999999999865443210011


Q ss_pred             CcchH------------HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC
Q 031224           75 GLDLH------------NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD  142 (163)
Q Consensus        75 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps  142 (163)
                      +..++            +...-+..++.+..+...+.+.                  ..+..+.+.+..||..||+.|.|
T Consensus       431 ~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h------------------~~~~~l~et~EeCWDhDaeARLT  492 (534)
T KOG3653|consen  431 EYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH------------------AGMAVLCETIEECWDHDAEARLT  492 (534)
T ss_pred             cccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC------------------ccHHHHHHHHHHHcCCchhhhhh
Confidence            11111            1111111111111111111111                  23455677888999999999999


Q ss_pred             HHHHHHHHHHhHH
Q 031224          143 ISDVVNNLQKVKS  155 (163)
Q Consensus       143 ~~~v~~~l~~~~~  155 (163)
                      +.=+.+.+.++..
T Consensus       493 A~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  493 AGCVEERMAELMM  505 (534)
T ss_pred             hHHHHHHHHHHhc
Confidence            9988888777654

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=1.6e-14  Score=100.76  Aligned_cols=66  Identities=21%  Similarity=0.310  Sum_probs=57.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+|+....    ........|||+.|.|||++....|...+|-|.+|++++||+.|+.||++.
T Consensus       306 HIKitDFGLCKE~I~----~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~  371 (516)
T KOG0690|consen  306 HIKITDFGLCKEEIK----YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK  371 (516)
T ss_pred             ceEeeecccchhccc----ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence            479999999986432    234456689999999999999999999999999999999999999999763

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=2.6e-14  Score=98.52  Aligned_cols=114  Identities=20%  Similarity=0.328  Sum_probs=76.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.........    .....++..|++||......++.++|+|++|++++++++|..||.....    ....
T Consensus       137 ~~~l~d~~~~~~~~~~~~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~  208 (254)
T cd06627         137 VVKLADFGVATKLNDVSKD----DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAAL  208 (254)
T ss_pred             CEEEeccccceecCCCccc----ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHH
Confidence            4789999999876443211    1223578889999998777788899999999999999999999864321    0100


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .. .....    . +    ..+.               .....+.+++.+||+.+|++|||+.+++.
T Consensus       209 ~~-~~~~~----~-~----~~~~---------------~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         209 FR-IVQDD----H-P----PLPE---------------GISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HH-HhccC----C-C----CCCC---------------CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            00 00000    0 0    0000               11234567889999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=3.9e-15  Score=101.57  Aligned_cols=67  Identities=25%  Similarity=0.259  Sum_probs=52.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||||||+++......   ....+..+-|.+|+|||++.+.. |+..+||||.||++.|++.++..|...
T Consensus       194 vLKICDFGLARvee~d~---~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq  261 (449)
T KOG0664|consen  194 ILKICDFGLARTWDQRD---RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA  261 (449)
T ss_pred             eEEecccccccccchhh---hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence            46999999999764332   11223345688999999998876 999999999999999999888777543

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.49  E-value=5.1e-14  Score=99.34  Aligned_cols=110  Identities=19%  Similarity=0.219  Sum_probs=74.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....       .....++..|++||.+.+...+.++|+||||++++++++|+.||.....     ...
T Consensus       139 ~~kl~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~  206 (290)
T cd05580         139 YIKITDFGFAKRVKGR-------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQI  206 (290)
T ss_pred             CEEEeeCCCccccCCC-------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence            4789999998876432       1234578899999998777788899999999999999999999865321     000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~  148 (163)
                      ..        .......  ..+.               .....+.+++.+||..||.+|+     +++++++
T Consensus       207 ~~--------~~~~~~~--~~~~---------------~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         207 YE--------KILEGKV--RFPS---------------FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HH--------HHhcCCc--cCCc---------------cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            00        0000000  0000               1123456788999999999999     7777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.48  E-value=3.1e-14  Score=95.04  Aligned_cols=112  Identities=22%  Similarity=0.387  Sum_probs=80.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+|++|||.+..-+.      ......|||.-|.+||...+..++..+|+|++|++.+|++.|.+||.....+  .....
T Consensus       162 ~lkiAdfGwsV~~p~------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~--etYkr  233 (281)
T KOG0580|consen  162 ELKIADFGWSVHAPS------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS--ETYKR  233 (281)
T ss_pred             CeeccCCCceeecCC------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH--HHHHH
Confidence            468999999976532      2344578999999999999999999999999999999999999999764311  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...      +...|   .                   .....+.+++.+|+..+|.+|.+..|++..
T Consensus       234 I~k~------~~~~p---~-------------------~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  234 IRKV------DLKFP---S-------------------TISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             HHHc------cccCC---c-------------------ccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            1100      00011   0                   222345678899999999999999998764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.48  E-value=3.3e-14  Score=97.04  Aligned_cols=116  Identities=24%  Similarity=0.296  Sum_probs=76.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||.+.......     ......++..|++||......++.++|+|++|++++++++|..||...... ......
T Consensus       125 ~~~l~d~~~~~~~~~~~-----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~~~~~~  198 (244)
T smart00220      125 HVKLADFGLARQLDPGG-----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-LELFKK  198 (244)
T ss_pred             cEEEccccceeeecccc-----ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHH
Confidence            46899999988764321     122345778899999987777888999999999999999999998542111 011111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...           .........              ......+.+++.+||..+|++||++.++++
T Consensus       199 ~~~-----------~~~~~~~~~--------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      199 IGK-----------PKPPFPPPE--------------WKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             Hhc-----------cCCCCcccc--------------ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            100           000000000              002345778999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.48  E-value=5.3e-14  Score=99.08  Aligned_cols=122  Identities=18%  Similarity=0.196  Sum_probs=76.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC--CccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR--VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~--~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .++|+|||+++.+.....   .......|+..|++||.+.+..  .+.++|+||||++++++++|..||...... ....
T Consensus       143 ~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~  218 (288)
T cd05583         143 HVVLTDFGLSKEFLAEEE---ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQS  218 (288)
T ss_pred             CEEEEECccccccccccc---cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHH
Confidence            478999999876543211   1112235788999999876554  678899999999999999999998532111 0111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .....        ..... . ..+               ......+.+++.+||+.||++|||+.++...|..
T Consensus       219 ~~~~~--------~~~~~-~-~~~---------------~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         219 EISRR--------ILKSK-P-PFP---------------KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             HHHHH--------HHccC-C-CCC---------------cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            11000        00000 0 000               0112335678899999999999998877666543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.48  E-value=4.4e-14  Score=97.92  Aligned_cols=121  Identities=21%  Similarity=0.261  Sum_probs=75.1

Q ss_pred             ceeecccccccccCccccC----CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRS----NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~----~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~   77 (163)
                      .++|+|||++.........    .........++..|++||.......+.++|+||||++++++++|..||......   
T Consensus       131 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---  207 (265)
T cd05579         131 HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE---  207 (265)
T ss_pred             CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---
Confidence            4789999998764322100    000112245677899999988777888999999999999999999998643211   


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                        .....        ......  ..+.             .......+..++.+||+.+|++|||+..+.+.|
T Consensus       208 --~~~~~--------~~~~~~--~~~~-------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         208 --EIFQN--------ILNGKI--EWPE-------------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             --HHHHH--------HhcCCc--CCCc-------------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence              00000        000000  0000             000134467899999999999999995444443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.48  E-value=5.5e-14  Score=101.05  Aligned_cols=66  Identities=24%  Similarity=0.277  Sum_probs=50.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.+....   ........|++.|+|||++.     ...++.++|+|||||+++|+++|+.||..
T Consensus       140 ~~kL~DfG~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~  210 (332)
T cd05623         140 HIRLADFGSCLKLMEDG---TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (332)
T ss_pred             CEEEeecchheecccCC---cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence            57999999987653221   11112346899999999875     23478899999999999999999999964

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=3.4e-14  Score=103.81  Aligned_cols=43  Identities=26%  Similarity=0.366  Sum_probs=39.6

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+|++.|+|||++.+..++.++|+|||||+++|+++|..||..
T Consensus       208 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (377)
T cd05629         208 TVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCS  250 (377)
T ss_pred             cCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCC
Confidence            4689999999999888899999999999999999999999965

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.48  E-value=2.1e-14  Score=104.34  Aligned_cols=44  Identities=27%  Similarity=0.405  Sum_probs=40.3

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+.|+|||++.+..++.++|+|||||+++++++|+.||.+.
T Consensus       196 ~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             cCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC
Confidence            46899999999998888999999999999999999999999653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.46  E-value=1.8e-14  Score=94.52  Aligned_cols=79  Identities=22%  Similarity=0.269  Sum_probs=58.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC----CCCccccceehhhHHHHHHHhCCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG----SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~----~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~   77 (163)
                      ++|+||||++..+.+.     ...+...|...|+|||.+..    ..|+-++||||+|+.+.|+.+++.||+........
T Consensus       187 qVKiCDFGIsG~L~dS-----iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~q  261 (282)
T KOG0984|consen  187 QVKICDFGISGYLVDS-----IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQ  261 (282)
T ss_pred             cEEEcccccceeehhh-----hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHH
Confidence            5899999999887542     22233468889999998742    35899999999999999999999999765444444


Q ss_pred             hHHHHHhc
Q 031224           78 LHNFVKNA   85 (163)
Q Consensus        78 ~~~~~~~~   85 (163)
                      +.+.+..+
T Consensus       262 LkqvVeep  269 (282)
T KOG0984|consen  262 LKQVVEEP  269 (282)
T ss_pred             HHHHhcCC
Confidence            44444433

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.46  E-value=3.6e-14  Score=102.85  Aligned_cols=119  Identities=20%  Similarity=0.331  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccC-CCcccccccccccccCCCCCCCC---CC-ccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRS-NQSSSIGLKGTVGYAPPEYGMGS---RV-STYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~g~~~y~~pe~~~~~---~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      ++||+|||++.....+... .......-+||+.|+|||.....   .+ +.+.||||+|+.+|.++.|+.||.+...-  
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~--  325 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL--  325 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH--
Confidence            5899999999876432111 11122235799999999987662   23 46679999999999999999999653111  


Q ss_pred             chHHHHHhcCchhhhhhhc-cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLD-PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.           ...++ +......+                +....+.+|++++|..||++|.+..+|...
T Consensus       326 ~l~-----------~KIvn~pL~fP~~p----------------e~~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  326 ELF-----------DKIVNDPLEFPENP----------------EINEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             HHH-----------HHHhcCcccCCCcc----------------cccHHHHHHHHHHhhcChhheeehhhheec
Confidence            111           11111 11111110                233446678899999999999999888643

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.45  E-value=1.4e-13  Score=96.24  Aligned_cols=117  Identities=15%  Similarity=0.251  Sum_probs=76.4

Q ss_pred             ceeecccccccccCccccCC----------------CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCC
Q 031224            2 TAHVGDFGLTRFIPEAIRSN----------------QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGK   65 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~----------------~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~   65 (163)
                      .++++|||++..........                ........++..|++||......++.++|+||+|++++++++|.
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~  219 (280)
T cd05581         140 HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK  219 (280)
T ss_pred             CEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence            47899999988764321100                01122345678899999987777888999999999999999999


Q ss_pred             CCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH--
Q 031224           66 RPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI--  143 (163)
Q Consensus        66 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~--  143 (163)
                      .||.....     .....        .......  ..+               ......+.+++.+||+.+|++|||+  
T Consensus       220 ~p~~~~~~-----~~~~~--------~~~~~~~--~~~---------------~~~~~~~~~li~~~l~~~p~~R~~~~~  269 (280)
T cd05581         220 PPFRGSNE-----YLTFQ--------KILKLEY--SFP---------------PNFPPDAKDLIEKLLVLDPQDRLGVNE  269 (280)
T ss_pred             CCCCCccH-----HHHHH--------HHHhcCC--CCC---------------CccCHHHHHHHHHHhcCCHhhCCCccc
Confidence            99965321     00000        0000000  000               0113346789999999999999999  


Q ss_pred             --HHHHH
Q 031224          144 --SDVVN  148 (163)
Q Consensus       144 --~~v~~  148 (163)
                        +++++
T Consensus       270 ~~~~ll~  276 (280)
T cd05581         270 GYDELKA  276 (280)
T ss_pred             CHHHHhc
Confidence              77764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.45  E-value=9.2e-14  Score=99.89  Aligned_cols=66  Identities=23%  Similarity=0.280  Sum_probs=50.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----CCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----SRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.......   .......|+..|+|||++.+     ..++.++|+||||++++++++|+.||..
T Consensus       140 ~~kl~DfG~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~  210 (331)
T cd05624         140 HIRLADFGSCLKMNQDGT---VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             CEEEEeccceeeccCCCc---eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence            479999999976543211   11123468999999998765     3577889999999999999999999964

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.45  E-value=6.7e-14  Score=96.07  Aligned_cols=60  Identities=25%  Similarity=0.254  Sum_probs=46.7

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCc
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTS   69 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~   69 (163)
                      ++++|||.+..+...       .....++..|++||......++.++|+||+|++++++++|..++.
T Consensus       124 ~~l~df~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~  183 (237)
T cd05576         124 IQLTYFSRWSEVEDS-------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE  183 (237)
T ss_pred             EEEecccchhccccc-------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence            688999987655321       111234667999999877778899999999999999999988764

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.44  E-value=1.7e-13  Score=94.43  Aligned_cols=109  Identities=23%  Similarity=0.247  Sum_probs=72.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++|+|||++.......    .......++..|++||...+...+.++|+|+||++++++++|+.||.....  ......
T Consensus       131 ~~~l~d~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~  204 (250)
T cd05123         131 HIKLTDFGLAKELSSEG----SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEK  204 (250)
T ss_pred             cEEEeecCcceecccCC----CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHH
Confidence            47899999987653321    112234577889999998777788899999999999999999999954311  011100


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS  144 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  144 (163)
                                 ......  ..+.               .....+.+++.+||..||+.||++.
T Consensus       205 -----------~~~~~~--~~~~---------------~~~~~l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         205 -----------ILKDPL--RFPE---------------FLSPEARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             -----------HhcCCC--CCCC---------------CCCHHHHHHHHHHhcCCHhhCCCcc
Confidence                       000000  0000               1123457799999999999999994

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=2.1e-13  Score=98.07  Aligned_cols=66  Identities=24%  Similarity=0.272  Sum_probs=50.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----CCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----SRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||++..+.....   .......|++.|+|||++..     ..++.++|+||+||+++++++|+.||..
T Consensus       140 ~~kl~Dfg~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  210 (331)
T cd05597         140 HIRLADFGSCLRLLADGT---VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             CEEEEECCceeecCCCCC---ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence            479999999876543211   11122458999999998753     3467889999999999999999999965

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.43  E-value=1e-13  Score=106.57  Aligned_cols=117  Identities=17%  Similarity=0.236  Sum_probs=84.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----CCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+|++|||++..+...    .....+.+||++|||||++.-     ..|+.++|+||+|++-.|+..|.+|+.+..+...
T Consensus       161 ~VKLvDFGvSaQldsT----~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra  236 (953)
T KOG0587|consen  161 EVKLVDFGVSAQLDST----VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA  236 (953)
T ss_pred             cEEEeeeeeeeeeecc----cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh
Confidence            4799999999877432    334455789999999999743     3478889999999999999999999876533211


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      -+      ..+.+.+                     +.......+.+.+.+++..||.-|-.+||++.++++.
T Consensus       237 LF------~IpRNPP---------------------PkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  237 LF------LIPRNPP---------------------PKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             hc------cCCCCCC---------------------ccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            00      1111111                     1112234677889999999999999999999998753

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.40  E-value=4.2e-13  Score=94.58  Aligned_cols=119  Identities=23%  Similarity=0.333  Sum_probs=73.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC--CCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS--RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~--~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++.......   .......|+..|++||.+...  .++.++|+||||++++++++|..||...... ....
T Consensus       143 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~  218 (290)
T cd05613         143 HVVLTDFGLSKEFHEDEV---ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQA  218 (290)
T ss_pred             CEEEeeCccceecccccc---cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHH
Confidence            478999999876533211   111234578899999988653  3678899999999999999999998532111 1111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      .........      .+..    +               ......+..++.+||+.||++|+     ++.+++..
T Consensus       219 ~~~~~~~~~------~~~~----~---------------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         219 EISRRILKS------EPPY----P---------------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             HHHHHhhcc------CCCC----C---------------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            111100000      0000    0               01123457889999999999997     66777653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.39  E-value=2e-13  Score=98.84  Aligned_cols=70  Identities=24%  Similarity=0.427  Sum_probs=53.6

Q ss_pred             ceeecccccccccCccccC-C--CcccccccccccccCCCCCCCC----CCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRS-N--QSSSIGLKGTVGYAPPEYGMGS----RVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~-~--~~~~~~~~g~~~y~~pe~~~~~----~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.+...... .  ....+...||.||.+||.+...    ..+.++||||+|++++.++.|+.||...
T Consensus       611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn  687 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN  687 (775)
T ss_pred             eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence            3799999999998654211 0  1123446799999999976543    2689999999999999999999999653

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.38  E-value=2e-13  Score=101.29  Aligned_cols=114  Identities=18%  Similarity=0.236  Sum_probs=78.4

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      |++||+|||++..+..+     ......+|++.|.|||+..+..| .+.+|+||+|++++.++.|..||++..-     .
T Consensus       192 mnikIaDfgfS~~~~~~-----~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-----k  261 (596)
T KOG0586|consen  192 MNIKIADFGFSTFFDYG-----LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-----K  261 (596)
T ss_pred             cceeeeccccceeeccc-----ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-----c
Confidence            57899999999887532     23345689999999999988775 5779999999999999999999976321     1


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....+.....++-      ..                   ....+.-+++++.+..+|.+|++++++.+.
T Consensus       262 ~Lr~rvl~gk~rI------p~-------------------~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  262 ELRPRVLRGKYRI------PF-------------------YMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             cccchheeeeecc------cc-------------------eeechhHHHHHHhhccCccccCCHHHhhhh
Confidence            1111111111110      00                   001123457778888899999999998653

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.38  E-value=1.3e-14  Score=106.78  Aligned_cols=64  Identities=27%  Similarity=0.438  Sum_probs=55.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||||||++|.+++.     .-....+||+.|.|||++....|+..-|+||.|+++|-.++|..||..
T Consensus       705 QvKlCDFGfARiIgEk-----sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE  768 (888)
T KOG4236|consen  705 QVKLCDFGFARIIGEK-----SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE  768 (888)
T ss_pred             ceeeccccceeecchh-----hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence            4799999999998763     223346899999999999999999999999999999999999999954

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=1.2e-12  Score=91.95  Aligned_cols=64  Identities=22%  Similarity=0.385  Sum_probs=55.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTS   69 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~   69 (163)
                      .+|++|+|+++.-...    ....+..+||+-|.|||++.+..|..++|-|++|++++||+.|+.||+
T Consensus       389 hikltdygmcke~l~~----gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  389 HIKLTDYGMCKEGLGP----GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             ceeecccchhhcCCCC----CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence            4799999999864322    334456899999999999999999999999999999999999999996

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.32  E-value=4.6e-13  Score=98.17  Aligned_cols=46  Identities=26%  Similarity=0.364  Sum_probs=42.3

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccc
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+-|+|||++.+..|+..+|.||+|||++|++.|.+||....+
T Consensus       348 tVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp  393 (550)
T KOG0605|consen  348 TVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETP  393 (550)
T ss_pred             ccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCH
Confidence            5699999999999999999999999999999999999999977543

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.32  E-value=3.4e-12  Score=82.44  Aligned_cols=67  Identities=27%  Similarity=0.347  Sum_probs=53.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHh-CCCCCcccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFT-GKRPTSDIF   72 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~-g~~p~~~~~   72 (163)
                      ..|++|||+++.++-......    ..+-|.+|++|+++.+.. |+.+.|+||-||++.|+.. |.+.|.+..
T Consensus       139 elkladfglarafgipvrcys----aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d  207 (292)
T KOG0662|consen  139 ELKLADFGLARAFGIPVRCYS----AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND  207 (292)
T ss_pred             cEEecccchhhhcCCceEeee----ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc
Confidence            468999999998865433322    235688999999999887 8888999999999999985 777776643

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.30  E-value=2.2e-12  Score=97.43  Aligned_cols=64  Identities=28%  Similarity=0.378  Sum_probs=54.6

Q ss_pred             eecccccccccCccccCCCcccccccccccccCCCCCC-CCCCccccceehhhHHHHHHHhCCCCCcccc
Q 031224            4 HVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-GSRVSTYGDVYSYGILLLETFTGKRPTSDIF   72 (163)
Q Consensus         4 kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~   72 (163)
                      ||+|||.|+-+.++.     .....+||.-|.+||... +..|+..+|.|||||++|++++|..||....
T Consensus       164 KLtDfG~Arel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  164 KLTDFGAARELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG  228 (732)
T ss_pred             eeecccccccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence            899999999886642     334578999999999987 4678999999999999999999999997643

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.28  E-value=2.5e-12  Score=85.93  Aligned_cols=143  Identities=15%  Similarity=0.092  Sum_probs=80.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+++.|+|+|.+...+...+     ..+.+.+|..||.+...+ |+.+-|+|||||++..++..+.||..-.+....+..
T Consensus       171 kLrlIDWGLAEFYHp~~eYn-----VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVk  245 (338)
T KOG0668|consen  171 KLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVK  245 (338)
T ss_pred             eeeeeecchHhhcCCCceee-----eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHH
Confidence            46899999999875442222     245678899999988765 888899999999999999999888532211111111


Q ss_pred             HHHhcCch-------hhhhhhccccccCCC-CCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPE-------QISEVLDPLFVTGGE-EGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+...-..       .+.-.+++.+..-.. ...............--...+.++|+...|.+|..+|+||.|.+..
T Consensus       246 IakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  246 IAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             HHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence            11110000       111111221111000 0000000000000000112456788888999999999999998764

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.27  E-value=6e-12  Score=89.99  Aligned_cols=95  Identities=23%  Similarity=0.319  Sum_probs=67.7

Q ss_pred             ccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCC
Q 031224           26 IGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEG  105 (163)
Q Consensus        26 ~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (163)
                      ...+||-.|.|||++.+...+.++|-|+|||++|||+.|.+||.+....+ .+.+.+....          .+....   
T Consensus       293 nSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl~NIv~~~l----------~Fp~~~---  358 (459)
T KOG0610|consen  293 NSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-TLRNIVGQPL----------KFPEEP---  358 (459)
T ss_pred             cccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-hHHHHhcCCC----------cCCCCC---
Confidence            45789999999999999999999999999999999999999997743222 2222222110          000000   


Q ss_pred             CCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC----HHHHHH
Q 031224          106 EGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD----ISDVVN  148 (163)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps----~~~v~~  148 (163)
                                    .....+.+|+++.|..||.+|..    |.||.+
T Consensus       359 --------------~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  359 --------------EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             --------------cchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence                          11233567888999999999998    777654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.24  E-value=4.6e-12  Score=97.07  Aligned_cols=126  Identities=18%  Similarity=0.188  Sum_probs=82.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccc-cceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTY-GDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~-~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.+..+.-............+|+..|+|||++.+..|.+. .||||.|+++..|+.|+.||.-....+.....
T Consensus       458 ~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~  537 (601)
T KOG0590|consen  458 ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT  537 (601)
T ss_pred             ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh
Confidence            47999999998764432222234455778999999999999998766 59999999999999999998643322211100


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .   ....               +.......   ..-.....+....++.++|+.||.+|.|+++|++
T Consensus       538 ~---~~~~---------------~~~~~~~~---~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  538 N---NYSD---------------QRNIFEGP---NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             h---cccc---------------ccccccCh---HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            0   0000               00000000   0112244555678999999999999999999975

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.21  E-value=2.1e-11  Score=90.37  Aligned_cols=131  Identities=21%  Similarity=0.316  Sum_probs=81.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-------CccccceehhhHHHHHHHhCCCCCcccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-------VSTYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-------~~~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      .+|++|||+.......  ..........-..-|.+||.+....       .+.+.|+||||++++|++..+.||......
T Consensus        87 ~lklt~~Gl~~~~~~~--~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~  164 (484)
T KOG1023|consen   87 VLKLTDFGLNSLLEET--AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLV  164 (484)
T ss_pred             EEEechhhhccccccc--ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccccccc
Confidence            5899999998776421  0011111112345689999886631       356689999999999999999999764432


Q ss_pred             Cc--chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           75 GL--DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        75 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      ..  .....+..    .....+-|.+...                 ......++.++..||..+|..||+++++-..++.
T Consensus       165 ~~~~eii~~~~~----~~~~~~rP~i~~~-----------------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~  223 (484)
T KOG1023|consen  165 EDPDEIILRVKK----GGSNPFRPSIELL-----------------NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT  223 (484)
T ss_pred             CChHHHHHHHHh----cCCCCcCcchhhh-----------------hhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence            22  12222211    0111111111100                 0222357889999999999999999999888877


Q ss_pred             hHH
Q 031224          153 VKS  155 (163)
Q Consensus       153 ~~~  155 (163)
                      +..
T Consensus       224 ~~~  226 (484)
T KOG1023|consen  224 INK  226 (484)
T ss_pred             hcc
Confidence            655

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.13  E-value=3.9e-11  Score=82.28  Aligned_cols=98  Identities=20%  Similarity=0.242  Sum_probs=71.7

Q ss_pred             cccccccCCCCCCCCC--C-ccccceehhhHHHHHHHhCCCCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCC
Q 031224           29 KGTVGYAPPEYGMGSR--V-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEG  105 (163)
Q Consensus        29 ~g~~~y~~pe~~~~~~--~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (163)
                      ..++.|++||.+...+  . -..+|+|||+++++|+-++..||.+..+.+......+.     .++..+.|         
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale-----glrv~ipp---------  412 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE-----GLRVHIPP---------  412 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc-----cccccCCC---------
Confidence            4577899999886654  2 25679999999999999999999876655433333221     22222332         


Q ss_pred             CCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224          106 EGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                                    .....+.+|+.-|++.||.+||.+..++-.|++++
T Consensus       413 --------------gis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  413 --------------GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             --------------CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence                          22345678999999999999999999999998764

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.11  E-value=7.2e-11  Score=82.51  Aligned_cols=69  Identities=19%  Similarity=0.231  Sum_probs=49.8

Q ss_pred             eeecccccccccCccccCC---CcccccccccccccCCCCCCC-----CCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            3 AHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMG-----SRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~-----~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      +|||||.+..-+..+....   .......+|+-.|||||++..     ..|+.+.|.||+|+++|-|++|..||.+.
T Consensus       218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~  294 (463)
T KOG0607|consen  218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH  294 (463)
T ss_pred             eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence            6999997766543221111   112234578889999997632     23788899999999999999999999764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.09  E-value=4.2e-11  Score=88.01  Aligned_cols=61  Identities=30%  Similarity=0.428  Sum_probs=48.8

Q ss_pred             eeecccccccccCccc--cCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh
Q 031224            3 AHVGDFGLTRFIPEAI--RSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT   63 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~--~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~   63 (163)
                      +||+|||+........  .......+...||.+||+||.+.+..|+.++|||++|.+++|++.
T Consensus       395 ~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  395 LKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            6899999987665432  011223345679999999999999999999999999999999987

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.08  E-value=6e-11  Score=89.56  Aligned_cols=118  Identities=16%  Similarity=0.206  Sum_probs=77.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+|++|||.+-.+...    ........||++|||||+..   .+.|+.++|+|+.|+.-.|+...++|..+..+.... 
T Consensus       150 DvklaDfgvsaqitat----i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l-  224 (829)
T KOG0576|consen  150 DVKLADFGVSAQITAT----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL-  224 (829)
T ss_pred             ceeecccCchhhhhhh----hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH-
Confidence            3789999998776432    22334578999999999863   345899999999999999998888876543221110 


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                        ++...-.-+     .+.....                 ......+.+|++.|+-.+|.+|||++.++.
T Consensus       225 --~LmTkS~~q-----pp~lkDk-----------------~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  225 --FLMTKSGFQ-----PPTLKDK-----------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             --HHhhccCCC-----CCcccCC-----------------ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence              111000000     1111111                 133455778899999999999999998765

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.07  E-value=3.3e-10  Score=85.36  Aligned_cols=66  Identities=21%  Similarity=0.267  Sum_probs=43.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC----------------------CccccceehhhHHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR----------------------VSTYGDVYSYGILLL   59 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~----------------------~~~~~di~s~g~~~~   59 (163)
                      .+||+|||+++.+......   ......+++.|++||.+....                      ...+.|+||+||+++
T Consensus       347 ~~kL~DFGla~~~~~~~~~---~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~  423 (507)
T PLN03224        347 QVKIIDFGAAVDMCTGINF---NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLM  423 (507)
T ss_pred             cEEEEeCcCccccccCCcc---CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHH
Confidence            5799999999765332111   111223478899999875321                      113469999999999


Q ss_pred             HHHhCCC-CCcc
Q 031224           60 ETFTGKR-PTSD   70 (163)
Q Consensus        60 e~~~g~~-p~~~   70 (163)
                      +++++.. |+.+
T Consensus       424 em~~~~l~p~~~  435 (507)
T PLN03224        424 QMCVPELRPVAN  435 (507)
T ss_pred             HHHhCCCCCccc
Confidence            9999764 6643

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.06  E-value=1.7e-10  Score=82.69  Aligned_cols=48  Identities=25%  Similarity=0.376  Sum_probs=40.9

Q ss_pred             cccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCcccccc
Q 031224           27 GLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus        27 ~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      ...||++|+|||++...+ -++++|+||.|++++-+++++.||.....+
T Consensus       236 nrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd  284 (418)
T KOG1167|consen  236 NRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDD  284 (418)
T ss_pred             ccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccc
Confidence            456999999999998766 678899999999999999999998765433

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.02  E-value=3.8e-10  Score=75.11  Aligned_cols=83  Identities=22%  Similarity=0.411  Sum_probs=63.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .++|+|||.+........    ......+...|.+||..... .++.+.|+|++|++++++                   
T Consensus       131 ~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------  187 (215)
T cd00180         131 KVKLADFGLSKLLTSDKS----LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------  187 (215)
T ss_pred             cEEEecCCceEEccCCcc----hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------
Confidence            468899999876543211    11223467789999988776 677889999999999998                   


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                                                                ..+.+++..|++.+|++||++.++++.
T Consensus       188 ------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ------------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ------------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                                                      235678889999999999999999864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.98  E-value=2.2e-10  Score=90.87  Aligned_cols=66  Identities=24%  Similarity=0.305  Sum_probs=53.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC----C-CCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM----G-SRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~----~-~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      ++||+|||-|-.+..+.   ......-+|||-|.+||++.    + +.|+..+|.||+|+++|||+.|.+||+.
T Consensus       213 HikLADFGsClkm~~dG---~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa  283 (1317)
T KOG0612|consen  213 HIKLADFGSCLKMDADG---TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA  283 (1317)
T ss_pred             cEeeccchhHHhcCCCC---cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence            47999999998886432   22334468999999999874    2 4588999999999999999999999964

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.89  E-value=1.4e-09  Score=74.55  Aligned_cols=120  Identities=18%  Similarity=0.274  Sum_probs=72.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCC--CccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSR--VSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~--~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      ++|+||||..+..+.....       .--+..|.+||...   ...  ..+..|+|.||++++.+++|..||.....++.
T Consensus       161 rvKlcDFG~t~k~g~tV~~-------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~  233 (378)
T KOG1345|consen  161 RVKLCDFGLTRKVGTTVKY-------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK  233 (378)
T ss_pred             EEEeeecccccccCceehh-------hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc
Confidence            5899999998875432111       11233477887542   222  46778999999999999999999975443333


Q ss_pred             chHHHHH---hcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           77 DLHNFVK---NALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        77 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ....+..   +..+ ..++.+.                        -....++++.++-+..++.+|-...++.++....
T Consensus       234 ~Y~~~~~w~~rk~~-~~P~~F~------------------------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~  288 (378)
T KOG1345|consen  234 PYWEWEQWLKRKNP-ALPKKFN------------------------PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL  288 (378)
T ss_pred             hHHHHHHHhcccCc-cCchhhc------------------------ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence            3332221   1111 1111111                        2233456777888999999886666665554433

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.79  E-value=2.9e-09  Score=80.73  Aligned_cols=49  Identities=27%  Similarity=0.346  Sum_probs=43.3

Q ss_pred             ccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224           28 LKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus        28 ~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||.-|+|||++....|+...|.||.|++++||+.|+.||....+.+.
T Consensus       831 lvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~t  879 (1034)
T KOG0608|consen  831 LVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGET  879 (1034)
T ss_pred             hcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcc
Confidence            5699999999999888899999999999999999999999977555443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.67  E-value=1.9e-08  Score=67.91  Aligned_cols=66  Identities=33%  Similarity=0.489  Sum_probs=50.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCC-CCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYG-MGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~-~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .++|+|||.+.......   ........++..|++||.. ....++.++|+|+||++++++++|+.||..
T Consensus       136 ~~~l~d~g~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      136 LVKLADFGLARFIHRDL---AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CEEEeeCceeeEecCcc---cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            47899999988764321   0011234567789999987 555677899999999999999999999954

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.62  E-value=6.7e-09  Score=82.35  Aligned_cols=70  Identities=23%  Similarity=0.278  Sum_probs=54.6

Q ss_pred             ceeecccccccccCcccc-----------CCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIR-----------SNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+|++|||+++.......           .........+||+.|.|||++.-..|...+|.|++|++++|.+.|+.||.+
T Consensus       181 hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG  260 (1205)
T KOG0606|consen  181 HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  260 (1205)
T ss_pred             cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence            368999999886532210           011122346899999999999988899999999999999999999999976


Q ss_pred             c
Q 031224           71 I   71 (163)
Q Consensus        71 ~   71 (163)
                      .
T Consensus       261 d  261 (1205)
T KOG0606|consen  261 D  261 (1205)
T ss_pred             C
Confidence            3

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.52  E-value=1.9e-08  Score=75.43  Aligned_cols=62  Identities=27%  Similarity=0.392  Sum_probs=50.1

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCc-cccceehhhHHHHHHHhCCCCCcc
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVS-TYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~-~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      +||.|||.+.....+      +-....||+.|.|||++.+.+|- ...|||++|+++|.++...-||++
T Consensus       709 ~klidfgsaa~~ksg------pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  709 VKLIDFGSAAYTKSG------PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             EEEeeccchhhhcCC------CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            689999988765332      23347899999999999998875 457999999999999888888865

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.32  E-value=2.6e-07  Score=74.10  Aligned_cols=86  Identities=20%  Similarity=0.334  Sum_probs=55.1

Q ss_pred             cccCCCCCCC----------CC-CccccceehhhHHHHHHHh-CCCCCccccccCcchHHHHHh--cCchhhhhhhcccc
Q 031224           33 GYAPPEYGMG----------SR-VSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHNFVKN--ALPEQISEVLDPLF   98 (163)
Q Consensus        33 ~y~~pe~~~~----------~~-~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   98 (163)
                      .|.|||....          .. .+++.||||.||++.|++. |+++|.-.     .+-.|...  ..++...+.++.  
T Consensus       192 CYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~~~~~e~~Le~Ied--  264 (1431)
T KOG1240|consen  192 CYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGNADDPEQLLEKIED--  264 (1431)
T ss_pred             eecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccCccCHHHHHHhCcC--
Confidence            5889996532          12 4678899999999999987 78887321     22222211  111111111111  


Q ss_pred             ccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           99 VTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                                              ..+..++..|++.||++|.+|++.++.
T Consensus       265 ------------------------~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  265 ------------------------VSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ------------------------ccHHHHHHHHHccCchhccCHHHHHHh
Confidence                                    124567778889999999999999987

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.28  E-value=1.9e-06  Score=62.59  Aligned_cols=119  Identities=19%  Similarity=0.195  Sum_probs=67.9

Q ss_pred             eeecccccccccCcc--ccCCCcccccccccccccCCCCCCCCC------CccccceehhhHHHHHHHhCCCCCcccccc
Q 031224            3 AHVGDFGLTRFIPEA--IRSNQSSSIGLKGTVGYAPPEYGMGSR------VSTYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~--~~~~~~~~~~~~g~~~y~~pe~~~~~~------~~~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      +.|+|||++-.-...  ..-........-|.-..||||+...-+      -..++|.|+.|.+-||++...-||+.....
T Consensus       384 LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem  463 (598)
T KOG4158|consen  384 LVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM  463 (598)
T ss_pred             EEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh
Confidence            568999987432211  000011111223555689999864321      237789999999999999999999873322


Q ss_pred             CcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           75 GLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+...|....++.     +..                       .+...+..++...|+.||++|+|+.-..+.
T Consensus       464 ~L~~r~Yqe~qLPa-----lp~-----------------------~vpp~~rqlV~~lL~r~pskRvsp~iAANv  510 (598)
T KOG4158|consen  464 LLDTRTYQESQLPA-----LPS-----------------------RVPPVARQLVFDLLKRDPSKRVSPNIAANV  510 (598)
T ss_pred             eechhhhhhhhCCC-----Ccc-----------------------cCChHHHHHHHHHhcCCccccCCccHHHhH
Confidence            22222222211111     110                       222334567777789999999996654443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.27  E-value=3.8e-06  Score=59.30  Aligned_cols=129  Identities=20%  Similarity=0.288  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCC--cccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCcccccc--
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQ--SSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFAE--   74 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~--~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~--   74 (163)
                      .++++|||.++.+........  .......|+..|++||.+.+   ..+....|+|++|+++++++.+..||......  
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~  219 (384)
T COG0515         140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA  219 (384)
T ss_pred             eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc
Confidence            368999999986544321111  12345678999999999877   46778899999999999999999996543211  


Q ss_pred             CcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           75 GLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .......+.....        +...........           ......+.+++..|+..+|..|.++.+....
T Consensus       220 ~~~~~~~~~~~~~--------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         220 TSQTLKIILELPT--------PSLASPLSPSNP-----------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHHhcCC--------cccccccCcccc-----------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            0011111111000        000000000000           1223445677888888899999998876654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.12  E-value=8.1e-07  Score=67.25  Aligned_cols=59  Identities=29%  Similarity=0.412  Sum_probs=47.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+++.|||+++.....    .    ..||+..|||||+..  .....+|.||||++.+++++|..||..
T Consensus       135 hi~~tdfglske~v~~----~----~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  135 HIKLTDFGLSKEAVKE----K----IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             ccccCCchhhhHhHhh----h----hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            3678899999875332    1    127999999999987  345778999999999999999999965

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.93  E-value=4.2e-06  Score=58.90  Aligned_cols=62  Identities=23%  Similarity=0.312  Sum_probs=38.2

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCC--------CCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG--------SRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~--------~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      +.|+||+.....+.....       ...+..|.+||....        ..++.+.|.|++|++++.++.+..||...
T Consensus       184 v~Lg~F~~~~r~g~~~~~-------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  184 VFLGDFSSLVRAGTRYRC-------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             EEE--GGGEEETTEEEEG-------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             EEEcChHHHeecCceeec-------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            567888776654332110       123456888886522        23678889999999999999999999653

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.81  E-value=0.00015  Score=53.63  Aligned_cols=124  Identities=15%  Similarity=0.182  Sum_probs=73.1

Q ss_pred             cccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhC-CCCCccccccCc----chHHHHHhcCchhhhhhhcc
Q 031224           27 GLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTG-KRPTSDIFAEGL----DLHNFVKNALPEQISEVLDP   96 (163)
Q Consensus        27 ~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g-~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~   96 (163)
                      +.+|...|.+||...     +..-+...|.|.+|+++++++.| +.||.+..-...    .........+....    +.
T Consensus       175 cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~----~~  250 (637)
T COG4248         175 CPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYAS----DQ  250 (637)
T ss_pred             cccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeech----hc
Confidence            456788899999754     22345668999999999998875 999987653211    11111111110000    00


Q ss_pred             ccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCC--cCCCCCHHHHHHHHHHhHHHHHhccCC
Q 031224           97 LFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVES--PRERMDISDVVNNLQKVKSTLLRCGIN  163 (163)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d--p~~Rps~~~v~~~l~~~~~~~~~~~~~  163 (163)
                      .     ......+.+    .-..-....+..+..+|+...  +.-|||++-.+..|.++..++..|-.+
T Consensus       251 ~-----~g~~p~P~~----~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~  310 (637)
T COG4248         251 R-----RGLKPPPRS----IPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVS  310 (637)
T ss_pred             c-----CCCCCCCCC----CChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhc
Confidence            0     000000000    001122344556777787643  668999999999999999999988653

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.71  E-value=0.0003  Score=50.72  Aligned_cols=130  Identities=21%  Similarity=0.179  Sum_probs=77.4

Q ss_pred             ceeeccccccc--ccCcc-ccC-CCc-c-cccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC
Q 031224            2 TAHVGDFGLTR--FIPEA-IRS-NQS-S-SIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG   75 (163)
Q Consensus         2 ~~kl~dfg~~~--~~~~~-~~~-~~~-~-~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~   75 (163)
                      .+.+.|||+++  .+... ... ... . .....||..|.++....+...+.+.|+||++-++.++..|..||.......
T Consensus       165 ~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~  244 (322)
T KOG1164|consen  165 TLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD  244 (322)
T ss_pred             eEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc
Confidence            46889999998  33211 110 111 1 223458999999988878888999999999999999999999986543211


Q ss_pred             cchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           76 LDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      . .... ...   ........ .. .                  .....+..+...+-+.+...+|....+...|..+..
T Consensus       245 ~-~~~~-~~~---~~~~~~~~-~~-~------------------~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~  299 (322)
T KOG1164|consen  245 L-KSKF-EKD---PRKLLTDR-FG-D------------------LKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD  299 (322)
T ss_pred             h-HHHH-HHH---hhhhcccc-cc-C------------------CChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence            1 1111 000   00000000 00 0                  112233444444555788889999988888776655


Q ss_pred             H
Q 031224          156 T  156 (163)
Q Consensus       156 ~  156 (163)
                      .
T Consensus       300 ~  300 (322)
T KOG1164|consen  300 S  300 (322)
T ss_pred             h
Confidence            4

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.65  E-value=1.3e-05  Score=62.25  Aligned_cols=68  Identities=28%  Similarity=0.316  Sum_probs=51.7

Q ss_pred             ceeecccccccccCc-cccCCCcccccccc-cccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPE-AIRSNQSSSIGLKG-TVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~-~~~~~~~~~~~~~g-~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      ..+++|||++..+.. +..  .......+| ++.|.+||...+.. .....|+||.|+++..+++|..|+...
T Consensus       163 ~l~~~df~~At~~~~~~g~--~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~  233 (601)
T KOG0590|consen  163 ALKIADFGLATAYRNKNGA--ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP  233 (601)
T ss_pred             cccCCCchhhccccccCCc--ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence            367899999988755 222  222334567 99999999987744 457789999999999999999998654

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.24  E-value=0.0012  Score=47.34  Aligned_cols=73  Identities=21%  Similarity=0.335  Sum_probs=55.0

Q ss_pred             ceeecccccccccCccccCCC---cccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQ---SSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~---~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      .+.+.|||+++.+....+..+   .......||-.||.--...+..-+.+-|+=|+|-++...+.|..||.+...+
T Consensus       167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~  242 (449)
T KOG1165|consen  167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD  242 (449)
T ss_pred             eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence            367899999998865433222   1223456888899877666766788889999999999999999999886544

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.60  E-value=0.0027  Score=51.85  Aligned_cols=45  Identities=33%  Similarity=0.514  Sum_probs=40.1

Q ss_pred             ccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224           26 IGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus        26 ~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      ....|++.|.+||.+.+......+|.|++|++++|.++|.+||..
T Consensus       993 ~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen  993 HAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred             ccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence            345688999999999998888889999999999999999999965

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.12  E-value=0.0025  Score=49.66  Aligned_cols=66  Identities=20%  Similarity=0.367  Sum_probs=41.7

Q ss_pred             eeecccccccccCccccC-----CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHH-hCCCCC
Q 031224            3 AHVGDFGLTRFIPEAIRS-----NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF-TGKRPT   68 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~-----~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~-~g~~p~   68 (163)
                      .||+.|+++.....+...     .........-..-|.+||++.+...+.++|++|+|++++-+. .|+..+
T Consensus       139 wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~  210 (700)
T KOG2137|consen  139 WKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSII  210 (700)
T ss_pred             eeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchh
Confidence            367777776654332111     011111122345699999998877888999999999998877 455544

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.72  E-value=0.013  Score=40.57  Aligned_cols=70  Identities=24%  Similarity=0.264  Sum_probs=47.2

Q ss_pred             eeecccccccccCccccCC---CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcccc
Q 031224            3 AHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIF   72 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~   72 (163)
                      +.+.|||+++.+....+..   -.......||-.|.+--...+..-+.+-|+=|+|-++...-.|..||.+..
T Consensus       153 l~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk  225 (341)
T KOG1163|consen  153 LYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK  225 (341)
T ss_pred             EEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence            5689999999875431111   112234567777765444334445677799999999988888999998754

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=95.53  E-value=0.015  Score=42.02  Aligned_cols=36  Identities=25%  Similarity=0.492  Sum_probs=28.2

Q ss_pred             ccccccCCCCCCCCCCccccceehhhHHHHHHHhCC
Q 031224           30 GTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGK   65 (163)
Q Consensus        30 g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~   65 (163)
                      +-++|.+|++-.....+..+|||+||...+++..+.
T Consensus       244 ~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE  279 (458)
T KOG1266|consen  244 SLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE  279 (458)
T ss_pred             cCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence            556788888766556678899999998888887654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.35  E-value=0.022  Score=43.61  Aligned_cols=66  Identities=27%  Similarity=0.349  Sum_probs=45.1

Q ss_pred             ceeecccccccccCccc-cCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCC
Q 031224            2 TAHVGDFGLTRFIPEAI-RSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPT   68 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~   68 (163)
                      ..+++|||+...+..+. ..........-|...|++||.+.+ -++...|++++|.++.+...+....
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccc
Confidence            46788999988876542 111111122246667999998643 4677889999999999988776544

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=95.03  E-value=0.034  Score=45.70  Aligned_cols=63  Identities=14%  Similarity=-0.015  Sum_probs=47.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKR   66 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~   66 (163)
                      .++|+|||.+.-+....  ........++|-.+.|+|+..+.+|+...|.|.++.+++-|+.|+.
T Consensus       839 ~l~lIDfG~siDm~lfp--~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  839 GLYLIDFGRSIDMKLFP--DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ceEEEecccceeeeEcC--CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            47899999986542211  0122334567888999999999999999999999999999988754

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=92.80  E-value=0.096  Score=41.86  Aligned_cols=52  Identities=17%  Similarity=0.238  Sum_probs=33.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGIL   57 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~   57 (163)
                      .+||+|||+++.....    ........+++.|.+||...... -...+++|++|.-
T Consensus       142 ~vkL~DFGls~~~~~~----~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~  194 (669)
T cd05610         142 HIKLTDFGLSKVTLNR----ELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFN  194 (669)
T ss_pred             CEEEEeCCCCccccCC----cccccccccCccccCccccccCCCCceeeeeeecCcC
Confidence            5799999999875432    11223356888999998654433 2334577887743

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK09188 serine/threonine protein kinase; Provisional

Probab=91.45  E-value=0.14  Score=37.82  Aligned_cols=40  Identities=18%  Similarity=-0.012  Sum_probs=24.9

Q ss_pred             ceeecccccccccCccccCCCc----ccccccccccccCCCCCC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQS----SSIGLKGTVGYAPPEYGM   41 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~----~~~~~~g~~~y~~pe~~~   41 (163)
                      .+||+|||+++.+.........    ...+..++..|++||.+.
T Consensus       150 ~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        150 EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            4799999999977543111110    012345677788999864

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=87.90  E-value=0.5  Score=36.81  Aligned_cols=27  Identities=15%  Similarity=-0.037  Sum_probs=20.7

Q ss_pred             HHHHHHHHHHhhcCCCCcCCCCCHHHH
Q 031224          120 ESLATILKIGVACSVESPRERMDISDV  146 (163)
Q Consensus       120 ~~~~~~~~l~~~cl~~dp~~Rps~~~v  146 (163)
                      .+.+.++.+...|+...|..||...++
T Consensus       165 ~~d~~~~~~~~~c~~~~~~ir~l~~~~  191 (725)
T KOG1093|consen  165 LADKKRLPLLKKCLWLEPIIRPLPMEL  191 (725)
T ss_pred             hhhHhHHHHhccCCccccccccchhHH
Confidence            455667888899999999988865544

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=86.77  E-value=0.12  Score=35.69  Aligned_cols=19  Identities=16%  Similarity=0.193  Sum_probs=14.3

Q ss_pred             CCCccccceehhhHHHHHH
Q 031224           43 SRVSTYGDVYSYGILLLET   61 (163)
Q Consensus        43 ~~~~~~~di~s~g~~~~e~   61 (163)
                      ..|+.++|+|+||+.+.-.
T Consensus       197 r~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        197 RHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             hHhcccccccceeEeehHH
Confidence            3456789999999877644

>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins

Probab=81.49  E-value=8.3  Score=26.40  Aligned_cols=22  Identities=9%  Similarity=0.190  Sum_probs=18.0

Q ss_pred             CCCCCHHHHHHHHHHhHHHHHh
Q 031224          138 RERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus       138 ~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      ..|++.+++.+.|..+++.+..
T Consensus       137 ~~r~~~~elk~EL~~l~~~~~~  158 (213)
T PF04301_consen  137 PPRRSFEELKEELAALYEFIKK  158 (213)
T ss_pred             CcCCCHHHHHHHHHHHHHHHhc
Confidence            4689999999999999876554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	163
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-09
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		8e-09
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-08
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-08
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		5e-08
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-08
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		7e-08
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		7e-08
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-07
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-07
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-07
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		3e-07
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-07
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-07
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		9e-06
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		1e-05
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-05
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-05
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		3e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		4e-05
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-04
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		2e-04
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-04
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-04
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-04
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-04
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		4e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		5e-04
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		5e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		5e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		5e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		5e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		5e-04
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		5e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		5e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		5e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		6e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		6e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		7e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		8e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		8e-04
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		8e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		8e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		9e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 22/153 (14%)
Query: 3   AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           A VGDFGL + +      +      ++GT+G+  PEY    + S   DV+ YG++LLE  
Sbjct: 181 AVVGDFGLAKLMD---YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 237
Query: 63  TGKRPTSDIFAEGLD----LHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXKLKQDQV 118
           TG+R   D+     D    L ++VK  L E+  E L                  L+ +  
Sbjct: 238 TGQR-AFDLARLANDDDVMLLDWVKGLLKEKKLEAL--------------VDVDLQGNYK 282
Query: 119 QESLATILKIGVACSVESPRERMDISDVVNNLQ 151
            E +  ++++ + C+  SP ER  +S+VV  L+
Sbjct: 283 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Query: 3   AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           A VGDFGL + +      +      ++G +G+  PEY    + S   DV+ YG++LLE  
Sbjct: 173 AVVGDFGLAKLMD---YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 229
Query: 63  TGKRPTSDIFAEGLD----LHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXKLKQDQV 118
           TG+R   D+     D    L ++VK  L E+  E L                  L+ +  
Sbjct: 230 TGQR-AFDLARLANDDDVMLLDWVKGLLKEKKLEAL--------------VDVDLQGNYK 274
Query: 119 QESLATILKIGVACSVESPRERMDISDVVNNLQ 151
            E +  ++++ + C+  SP ER  +S+VV  L+
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 12/84 (14%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R++   +   ++SS+G K  V ++PPE  M S+ S+  D++++G+L+ E ++ 
Sbjct: 161 VSDFGLSRYV---LDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
Query: 64  GKRP--------TSDIFAEGLDLH 79
           GK P        T++  A+GL L+
Sbjct: 218 GKMPYERFTNSETAEHIAQGLRLY 241

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R++   +    +SS+G K  V ++PPE  M S+ S+  D++++G+L+ E ++ 
Sbjct: 141 VSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 197
Query: 64  GKRP--------TSDIFAEGLDLH 79
           GK P        T++  A+GL L+
Sbjct: 198 GKMPYERFTNSETAEHIAQGLRLY 221

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R++   +    +SS+G K  V ++PPE  M S+ S+  D++++G+L+ E ++ 
Sbjct: 145 VSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 201
Query: 64  GKRP--------TSDIFAEGLDLH 79
           GK P        T++  A+GL L+
Sbjct: 202 GKMPYERFTNSETAEHIAQGLRLY 225

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R++   +    +SS+G K  V ++PPE  M S+ S+  D++++G+L+ E ++ 
Sbjct: 146 VSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 202
Query: 64  GKRP--------TSDIFAEGLDLH 79
           GK P        T++  A+GL L+
Sbjct: 203 GKMPYERFTNSETAEHIAQGLRLY 226

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R++   +    +SS+G K  V ++PPE  M S+ S+  D++++G+L+ E ++ 
Sbjct: 152 VSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 208
Query: 64  GKRP--------TSDIFAEGLDLH 79
           GK P        T++  A+GL L+
Sbjct: 209 GKMPYERFTNSETAEHIAQGLRLY 232

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R++   +    +SS+G K  V ++PPE  M S+ S+  D++++G+L+ E ++ 
Sbjct: 161 VSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
Query: 64  GKRP--------TSDIFAEGLDLH 79
           GK P        T++  A+GL L+
Sbjct: 218 GKMPYERFTNSETAEHIAQGLRLY 241

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TRF+   +    +SS G K  V +A PE    SR S+  DV+S+G+L+ E F+ 
Sbjct: 142 VSDFGMTRFV---LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 198
Query: 64  GKRP 67
           GK P
Sbjct: 199 GKIP 202

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TRF+   +    +SS G K  V +A PE    SR S+  DV+S+G+L+ E F+ 
Sbjct: 144 VSDFGMTRFV---LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 200
Query: 64  GKRP 67
           GK P
Sbjct: 201 GKIP 204

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TRF+   +    +SS G K  V +A PE    SR S+  DV+S+G+L+ E F+ 
Sbjct: 145 VSDFGMTRFV---LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 201
Query: 64  GKRP 67
           GK P
Sbjct: 202 GKIP 205

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 12/85 (14%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R++   +    +SS G K  V ++PPE  M S+ S+  D++++G+L+ E ++ 
Sbjct: 146 VSDFGLSRYV---LDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 202
Query: 64  GKRP--------TSDIFAEGLDLHN 80
           GK P        T++  A+GL L+ 
Sbjct: 203 GKMPYERFTNSETAEHIAQGLRLYR 227

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TRF+   +    +SS G K  V +A PE    SR S+  DV+S+G+L+ E F+ 
Sbjct: 144 VSDFGMTRFV---LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 200
Query: 64  GKRP 67
           GK P
Sbjct: 201 GKIP 204

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TRF+   +    +SS G K  V +A PE    SR S+  DV+S+G+L+ E F+ 
Sbjct: 147 VSDFGMTRFV---LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 203
Query: 64  GKRP 67
           GK P
Sbjct: 204 GKIP 207

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TRF+   +    +SS G K  V +A PE    SR S+  DV+S+G+L+ E F+ 
Sbjct: 164 VSDFGMTRFV---LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 220
Query: 64  GKRP 67
           GK P
Sbjct: 221 GKIP 224

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1   MTAHVGDFGLTRFIPE-AIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLL 59
           +   V DFGL+RF+ E +    ++SS+G K  + +  PE     + ++  D +SYGI++ 
Sbjct: 155 LVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 214
Query: 60  ETFT-GKRPTSDI 71
           E  + G+RP  D+
Sbjct: 215 EVMSFGERPYWDM 227

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFG+TR++   +     SS+G K  V ++ PE     + S+  DV+++GIL+ E
Sbjct: 141 LCVKVSDFGMTRYV---LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE 197
Query: 61  TFT-GKRP 67
            F+ GK P
Sbjct: 198 VFSLGKMP 205

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 33/156 (21%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFG+++   E  +++    +  KGT+GY  PEY +  R++   DVYS+G++L E    
Sbjct: 180 ITDFGISKKGTELDQTHLXXVV--KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 65  K--------RPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXKLKQD 116
           +        R   ++    ++ HN        Q+ +++DP                   D
Sbjct: 238 RSAIVQSLPREMVNLAEWAVESHN------NGQLEQIVDPNLA----------------D 275
Query: 117 QVQ-ESLATILKIGVACSVESPRERMDISDVVNNLQ 151
           +++ ESL       V C   S  +R  + DV+  L+
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1   MTAHVGDFGLTRFIPE-AIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLL 59
           +   V DFGL+RF+ E +     +SS+G K  + +  PE     + ++  D +SYGI++ 
Sbjct: 153 LVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 212
Query: 60  ETFT-GKRPTSDI 71
           E  + G+RP  D+
Sbjct: 213 EVMSFGERPYWDM 225

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 33/156 (21%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFG+++   E  +++    +  KGT+GY  PEY +  R++   DVYS+G++L E    
Sbjct: 180 ITDFGISKKGTELGQTHLXXVV--KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 65  K--------RPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVXXXXXXXXXXXXKLKQD 116
           +        R   ++    ++ HN        Q+ +++DP                   D
Sbjct: 238 RSAIVQSLPREMVNLAEWAVESHN------NGQLEQIVDPNLA----------------D 275
Query: 117 QVQ-ESLATILKIGVACSVESPRERMDISDVVNNLQ 151
           +++ ESL       V C   S  +R  + DV+  L+
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1   MTAHVGDFGLTRFIPEAIRS-NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLL 59
           +   V DFGL+RF+ +       +S++G K  + +  PE     + ++  DV+SYGI++ 
Sbjct: 146 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 205
Query: 60  ETFT-GKRPTSDI 71
           E  + G+RP  D+
Sbjct: 206 EVMSYGERPYWDM 218

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1   MTAHVGDFGLTRFIPEAIRS-NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLL 59
           +   V DFGL+RF+ +       +S++G K  + +  PE     + ++  DV+SYGI++ 
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 231
Query: 60  ETFT-GKRPTSDI 71
           E  + G+RP  D+
Sbjct: 232 EVMSYGERPYWDM 244

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 1   MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
           +   V DFGL+R I   PEA+ +     I ++ T     PE     + ++  DV+SYGI+
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTA----PEAIQYRKFTSASDVWSYGIV 237
Query: 58  LLETFT-GKRPTSDI 71
           + E  + G+RP  D+
Sbjct: 238 MWEVMSYGERPYWDM 252

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           V DFG+ R I ++  S  + +  + GT  Y  PE   G  V    DVYS G +L E  TG
Sbjct: 157 VMDFGIARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 65  KRP 67
           + P
Sbjct: 216 EPP 218

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           V DFG+ R I ++  S  + +  + GT  Y  PE   G  V    DVYS G +L E  TG
Sbjct: 157 VMDFGIARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 65  KRP 67
           + P
Sbjct: 216 EPP 218

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           V DFG+ R I ++  S  + +  + GT  Y  PE   G  V    DVYS G +L E  TG
Sbjct: 157 VMDFGIARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 65  KRP 67
           + P
Sbjct: 216 EPP 218

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           V DFG+ R I ++  S  + +  + GT  Y  PE   G  V    DVYS G +L E  TG
Sbjct: 157 VMDFGIARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 65  KRP 67
           + P
Sbjct: 216 EPP 218

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           V DFG+ R I ++  S  + +  + GT  Y  PE   G  V    DVYS G +L E  TG
Sbjct: 174 VMDFGIARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
Query: 65  KRP 67
           + P
Sbjct: 233 EPP 235

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFGL R        ++++ +   G   +  PE    S  S   DV+SYG+LL E  TG
Sbjct: 157 ITDFGLAR------EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
Query: 65  KRP 67
           + P
Sbjct: 211 EVP 213

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            TA + DFGL R   +  ++   S I   GT  Y  PE  +   ++   D+YS+G++LLE
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXSRI--VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLE 226
Query: 61  TFTG 64
             TG
Sbjct: 227 IITG 230

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           V DFG+ R I ++  S   ++  + GT  Y  PE   G  V    DVYS G +L E  TG
Sbjct: 157 VVDFGIARAIADSGNSVXQTA-AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 65  KRP 67
           + P
Sbjct: 216 EPP 218

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 5   VGDFGLTR--FIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           +GDFG++R  +  +  R    + + ++    + PPE  M  + +T  DV+S+G++L E F
Sbjct: 174 IGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 63  T-GKRP 67
           T GK+P
Sbjct: 230 TYGKQP 235

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 148 LVCKVADFGLARLIED---NEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 61  TFTGKR 66
             T  R
Sbjct: 205 LTTKGR 210

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 141 LVCKVADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 197
Query: 61  TFTGKR 66
             T  R
Sbjct: 198 LTTKGR 203

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 151 LVCKVADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 61  TFTGKR 66
             T  R
Sbjct: 208 LTTKGR 213

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   + DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 142 LICKIADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 61  TFTGKR 66
             T  R
Sbjct: 199 LVTKGR 204

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
           +GDFGLT+ +P+     +    G      YAP E    S+ S   DV+S+G++L E FT
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            TA + DFGL R   +  +    S I   GT  Y  PE  +   ++   D+YS+G++LLE
Sbjct: 161 FTAKISDFGLARASEKFAQXVXXSRI--VGTTAYXAPE-ALRGEITPKSDIYSFGVVLLE 217
Query: 61  TFTG 64
             TG
Sbjct: 218 IITG 221

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 1   MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
           +   V DFG++R +   PEA  + +   I ++ T     PE     + ++  DV+SYGI+
Sbjct: 153 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA----PEAIAYRKFTSASDVWSYGIV 208
Query: 58  LLETFT-GKRPTSDI 71
           + E  + G+RP  D+
Sbjct: 209 MWEVMSYGERPYWDM 223

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 1   MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
           +   V DFG++R +   PEA  + +   I ++ T     PE     + ++  DV+SYGI+
Sbjct: 168 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA----PEAIAYRKFTSASDVWSYGIV 223
Query: 58  LLETFT-GKRPTSDI 71
           + E  + G+RP  D+
Sbjct: 224 MWEVMSYGERPYWDM 238

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGT--VGYAPPEYGMGSRVSTYGDVYSYGILL 58
           +   +GDFG++R     I S     +G +    + + PPE  +  + +T  DV+S+G++L
Sbjct: 172 LVVKIGDFGMSR----DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 227
Query: 59  LETFT-GKRPTSDI 71
            E FT GK+P   +
Sbjct: 228 WEIFTYGKQPWYQL 241

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 148 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 61  TFTGKR 66
             T  R
Sbjct: 205 LTTKGR 210

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 1   MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
           +   V DFG++R +   PEA  + +   I ++ T     PE     + ++  DV+SYGI+
Sbjct: 147 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA----PEAIAYRKFTSASDVWSYGIV 202
Query: 58  LLETFT-GKRPTSDI 71
           + E  + G+RP  D+
Sbjct: 203 MWEVMSYGERPYWDM 217

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 144 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 200
Query: 61  TFTGKR 66
             T  R
Sbjct: 201 LTTKGR 206

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 142 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 61  TFTGKR 66
             T  R
Sbjct: 199 LTTKGR 204

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 140 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 196
Query: 61  TFTGKR 66
             T  R
Sbjct: 197 LTTKGR 202

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 151 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 61  TFTGKR 66
             T  R
Sbjct: 208 LTTKGR 213

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 151 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 61  TFTGKR 66
             T  R
Sbjct: 208 LTTKGR 213

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 151 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 61  TFTGKR 66
             T  R
Sbjct: 208 LTTKGR 213

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 151 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 61  TFTGKR 66
             T  R
Sbjct: 208 LTTKGR 213

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGT--VGYAPPEYGMGSRVSTYGDVYSYGILL 58
           +   +GDFG++R     I S     +G +    + + PPE  +  + +T  DV+S+G++L
Sbjct: 166 LVVKIGDFGMSR----DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 221
Query: 59  LETFT-GKRPTSDI 71
            E FT GK+P   +
Sbjct: 222 WEIFTYGKQPWYQL 235

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 151 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 61  TFTGKR 66
             T  R
Sbjct: 208 LTTKGR 213

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 151 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 61  TFTGKR 66
             T  R
Sbjct: 208 LTTKGR 213

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 151 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 61  TFTGKR 66
             T  R
Sbjct: 208 LTTKGR 213

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 317 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 61  TFTGKR 66
             T  R
Sbjct: 374 LTTKGR 379

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 317 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 61  TFTGKR 66
             T  R
Sbjct: 374 LTTKGR 379

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 317 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 61  TFTGKR 66
             T  R
Sbjct: 374 LTTKGR 379

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 1   MTAHVGDFGLTRFIPEA--IRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILL 58
           M   + DFGL+R I  A   +++ + +I ++    + PPE    +R +T  DV++YG++L
Sbjct: 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVL 266
Query: 59  LETFT 63
            E F+
Sbjct: 267 WEIFS 271

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 1   MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
           +   V DFGL+R +   PEA  + +   I ++ T     PE     + ++  DV+SYGI+
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIV 210
Query: 58  LLETFT-GKRP 67
           L E  + G+RP
Sbjct: 211 LWEVMSYGERP 221

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFG    I   + +N       KG+  +  PE   GS  S   DV+S+GI+L E  T 
Sbjct: 147 ICDFGTACDIQTHMTNN-------KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR 199
Query: 65  KRPTSDI----FAEGLDLHN-----FVKNALPEQISEVL 94
           ++P  +I    F     +HN      +KN LP+ I  ++
Sbjct: 200 RKPFDEIGGPAFRIMWAVHNGTRPPLIKN-LPKPIESLM 237

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFG    I   + +N       KG+  +  PE   GS  S   DV+S+GI+L E  T 
Sbjct: 148 ICDFGTACDIQTHMTNN-------KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR 200
Query: 65  KRPTSDI----FAEGLDLHN-----FVKNALPEQISEVL 94
           ++P  +I    F     +HN      +KN LP+ I  ++
Sbjct: 201 RKPFDEIGGPAFRIMWAVHNGTRPPLIKN-LPKPIESLM 238

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 1   MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
           +   V DFGL+R +   PEA  + +   I ++ T     PE     + ++  DV+SYGI+
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIV 210
Query: 58  LLETFT-GKRP 67
           L E  + G+RP
Sbjct: 211 LWEVMSYGERP 221

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            TA + DFGL R   +  ++     I   GT  Y  PE  +   ++   D+YS+G++LLE
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXXRI--VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLE 226
Query: 61  TFTG 64
             TG
Sbjct: 227 IITG 230

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 1   MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
           +   V DFGL+R +   PEA  + +   I ++    +  PE     + ++  DV+SYGI+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIV 239
Query: 58  LLETFT-GKRP 67
           L E  + G+RP
Sbjct: 240 LWEVMSYGERP 250

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGT--VGYAPPEYGMGSRVSTYGDVYSYGILL 58
           +   +GDFG++R     I S     +G +    + + PPE  +  + +T  DV+S+G++L
Sbjct: 195 LVVKIGDFGMSR----DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 59  LETFT-GKRPTSDI 71
            E FT GK+P   +
Sbjct: 251 WEIFTYGKQPWYQL 264

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	163
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-23
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	9e-21
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-20
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-12
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-11
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-11
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-10
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	8e-09
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-08
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-08
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	8e-08
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-07
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-07
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-07
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	8e-07
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-06
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	7e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	8e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-05
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-05
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-05
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	5e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	8e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-04
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 93.4 bits (233), Expect = 1e-23
 Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 22/150 (14%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
            A VGDFGL + +     ++ ++++  +GT+G+  PEY    + S   DV+ YG++LLE 
Sbjct: 172 EAVVGDFGLAKLMDYK-DTHVTTAV--RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 228

Query: 62  FTGKRPTSDIFAEGLDLHNFVKNALP----EQISEVLDPLFVTGGEEGEGTAEEKLKQDQ 117
            TG+R          D    +         +++  ++D                 L+ + 
Sbjct: 229 ITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV---------------DLQGNY 273

Query: 118 VQESLATILKIGVACSVESPRERMDISDVV 147
             E +  ++++ + C+  SP ER  +S+VV
Sbjct: 274 KDEEVEQLIQVALLCTQSSPMERPKMSEVV 303

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 85.3 bits (212), Expect = 9e-21
 Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFG+++   E  +++ S+ +  KGT+GY  PEY +  R++   DVYS+G++L E
Sbjct: 176 FVPKITDFGISKKGTELDQTHLSTVV--KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALP----EQISEVLDPLFVTGGEEGEGTAEEKLKQD 116
               +            + N  + A+      Q+ +++DP                L   
Sbjct: 234 VLCARSAIVQSLPRE--MVNLAEWAVESHNNGQLEQIVDP---------------NLADK 276

Query: 117 QVQESLATILKIGVACSVESPRERMDISDVVNNLQ 151
              ESL       V C   S  +R  + DV+  L+
Sbjct: 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 84.9 bits (211), Expect = 1e-20
 Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 28/161 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            TA + DFGL R   +  ++  +S I   GT  Y  PE  +   ++   D+YS+G++LLE
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRI--VGTTAYMAPEA-LRGEITPKSDIYSFGVVLLE 226

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALP-----EQISEVLDPLFVTGGEEGEGTAEEKLKQ 115
             TG         E  +    +          + I + +D                    
Sbjct: 227 IITGLPAVD----EHREPQLLLDIKEEIEDEEKTIEDYIDKKM----------------N 266

Query: 116 DQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST 156
           D    S+  +  +   C  E   +R DI  V   LQ++ ++
Sbjct: 267 DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 28/168 (16%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG-----DVYSYG 55
           +TA + DFGL          +   + G  GT  Y  PE   G+           D+Y+ G
Sbjct: 168 LTACIADFGLALKFEAG--KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG 225

Query: 56  ILLLETFTGKRPTSDIFAEG-LDLHNFVKNALP-EQISEV-----LDPLFVTGGEEGEGT 108
           ++L E  +          E  L     +      E + EV       P+           
Sbjct: 226 LVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVL---------- 275

Query: 109 AEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST 156
             +  ++      L   ++    C       R+    V   + +++  
Sbjct: 276 -RDYWQKHAGMAMLCETIE---ECWDHDAEARLSAGCVGERITQMQRL 319

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
              + DFG    I       Q+     KG+  +  PE   GS  S   DV+S+GI+L E 
Sbjct: 144 VLKICDFGTACDI-------QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196

Query: 62  FTGKRPTSDIFAEGLDLHNFVKN----ALPEQISEVLDPL 97
            T ++P  +I      +   V N     L + + + ++ L
Sbjct: 197 ITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 236

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 60.8 bits (148), Expect = 7e-12
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            T  V DFGL+R       S   SS    GT  +  PE       +   DVYS+G++L E
Sbjct: 176 YTVKVCDFGLSRLK----ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWE 231

Query: 61  TFTGKRPTSDI 71
             T ++P  ++
Sbjct: 232 LATLQQPWGNL 242

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFGL R        ++++ +   G   +  PE    S  S   DV+SYG+LL E  TG
Sbjct: 157 ITDFGLAREW------HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210

Query: 65  KRPTSDI 71
           + P   I
Sbjct: 211 EVPFRGI 217

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 57.7 bits (140), Expect = 8e-11
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 9/73 (12%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE--YGMGSRVSTYGDVYSYGILL 58
           + A V DFGL++           S  GL G   +  PE         +   D YS+ ++L
Sbjct: 166 VCAKVADFGLSQQSVH-------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218

Query: 59  LETFTGKRPTSDI 71
               TG+ P  + 
Sbjct: 219 YTILTGEGPFDEY 231

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 57.7 bits (140), Expect = 9e-11
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGIL 57
            T  +GDFGL         S+Q     L G++ +  PE       +  S   DVY++GI+
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214

Query: 58  LLETFTGKRPTSDI 71
           L E  TG+ P S+I
Sbjct: 215 LYELMTGQLPYSNI 228

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 12/74 (16%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG---DVYSYGIL 57
           MTA +    +              S G      +  PE        T     D++S+ +L
Sbjct: 150 MTARISMADVKFSF---------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200

Query: 58  LLETFTGKRPTSDI 71
           L E  T + P +D+
Sbjct: 201 LWELVTREVPFADL 214

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 10/81 (12%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSI-GLKGTVGYAPPE---------YGMGSRVSTYGD 50
               + DFGL           +   +    G + +  PE                S + D
Sbjct: 166 GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD 225

Query: 51  VYSYGILLLETFTGKRPTSDI 71
           V++ G +  E    + P    
Sbjct: 226 VFALGTIWYELHAREWPFKTQ 246

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 10/81 (12%)

Query: 1   MTAHVGDFGLTRFIPE----------AIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGD 50
               V DFGL R + +            + ++     + G   +  PE   G       D
Sbjct: 145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVD 204

Query: 51  VYSYGILLLETFTGKRPTSDI 71
           V+S+GI+L E         D 
Sbjct: 205 VFSFGIVLCEIIGRVNADPDY 225

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 50.2 bits (120), Expect = 4e-08
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 13/88 (14%)

Query: 1   MTAHVGDFGLTRFI----PEAIRSNQSSSIGLKGTVGYAPPEYGMGS-------RVSTYG 49
            T  + DFGL+  +            +++I   GT+ Y  PE   G+             
Sbjct: 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV 216

Query: 50  DVYSYGILLLETFTGKRPTSDIFAEGLD 77
           D+Y+ G++  E F   R T     E + 
Sbjct: 217 DMYALGLIYWEIFM--RCTDLFPGESVP 242

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           V DFG+ R I ++  S   ++  + GT  Y  PE   G  V    DVYS G +L E  TG
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

Query: 65  KRP 67
           + P
Sbjct: 216 EPP 218

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFG+ + + E   +  +  +G   TV Y  PE   G       D+YS GI+L E   G
Sbjct: 152 IFDFGIAKALSETSLTQTNHVLG---TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208

Query: 65  KRP 67
           + P
Sbjct: 209 EPP 211

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFG+     +   +   +++G   T+ Y  PE    S  +   D+Y+   +L E  TG
Sbjct: 175 LVDFGIASATTDEKLTQLGNTVG---TLYYMAPERFSESHATYRADIYALTCVLYECLTG 231

Query: 65  KRP 67
             P
Sbjct: 232 SPP 234

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 12/77 (15%), Positives = 23/77 (29%), Gaps = 6/77 (7%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE------YGMGSRVSTYGDVYSY 54
               + D GL     ++       +    GT  Y  PE                 D++++
Sbjct: 150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF 209

Query: 55  GILLLETFTGKRPTSDI 71
           G++L E          +
Sbjct: 210 GLVLWEVARRMVSNGIV 226

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)

Query: 5   VGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           V DFGL R +   PEA  + +   I ++ T     PE     + ++  DV+SYGI+L E 
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEV 243

Query: 62  FT-GKRP 67
            + G+RP
Sbjct: 244 MSYGERP 250

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R++ +      +SS+G K  V ++PPE  M S+ S+  D++++G+L+ E ++ 
Sbjct: 161 VSDFGLSRYVLD---DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217

Query: 64  GKRP 67
           GK P
Sbjct: 218 GKMP 221

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TR++ +       SS+G K  V ++ PE     + S+  DV+++GIL+ E F+ 
Sbjct: 145 VSDFGMTRYVLD---DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSL 201

Query: 64  GKRP 67
           GK P
Sbjct: 202 GKMP 205

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 7/66 (10%)

Query: 5   VGDFGLTRFIPEAI--RSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETF 62
           + DFG++R   + +   S     + +K T     PE     R S+  DV+S+GILL ETF
Sbjct: 254 ISDFGMSREEADGVYAASGGLRQVPVKWT----APEALNYGRYSSESDVWSFGILLWETF 309

Query: 63  T-GKRP 67
           + G  P
Sbjct: 310 SLGASP 315

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E  T 
Sbjct: 404 VADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 460

Query: 64  GKRP 67
           G+ P
Sbjct: 461 GRVP 464

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 8/67 (11%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGILLLET 61
           V DFGL+R + E       ++ G K  + +  PE   Y    + ++  DV+S+GI++ E 
Sbjct: 188 VSDFGLSRVL-EDDPEATYTTSGGKIPIRWTAPEAISYR---KFTSASDVWSFGIVMWEV 243

Query: 62  FT-GKRP 67
            T G+RP
Sbjct: 244 MTYGERP 250

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+TRF+ +      +SS G K  V +A PE    SR S+  DV+S+G+L+ E F+ 
Sbjct: 145 VSDFGMTRFVLD---DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 201

Query: 64  GKRP 67
           GK P
Sbjct: 202 GKIP 205

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 47.8 bits (114), Expect = 3e-07
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E  T 
Sbjct: 321 VADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377

Query: 64  GKRP 67
           G+ P
Sbjct: 378 GRVP 381

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R +        ++  G K  + +  PE    ++ S   DV+++G+LL E  T 
Sbjct: 359 VADFGLSRLMTG---DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415

Query: 64  GKRP 67
           G  P
Sbjct: 416 GMSP 419

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 6/77 (7%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG------DVYSY 54
            T  + D GL      A  +   +     GT  Y  PE    S    +       D+Y+ 
Sbjct: 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 243

Query: 55  GILLLETFTGKRPTSDI 71
           G++  E           
Sbjct: 244 GLVFWEIARRCSIGGIH 260

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 47.0 bits (112), Expect = 6e-07
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL R I +   +  ++  G K  + +  PE       +   DV+S+GILL+E  T 
Sbjct: 325 IADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY 381

Query: 64  GKRP 67
           G+ P
Sbjct: 382 GRIP 385

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 46.7 bits (111), Expect = 7e-07
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 6/77 (7%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYG---DVYSY 54
            T  + D GL                   GT  Y PPE     +           D+YS+
Sbjct: 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSF 238

Query: 55  GILLLETFTGKRPTSDI 71
           G++L E          +
Sbjct: 239 GLILWEVARRCVSGGIV 255

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 46.4 bits (111), Expect = 8e-07
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL R I +   +  ++  G K  + +  PE       +   DV+S+GILL E  T 
Sbjct: 150 IADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206

Query: 64  GKRP 67
           G+ P
Sbjct: 207 GRIP 210

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 1   MTAHVGDFGLTRFIPEA--IRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILL 58
             A +GDFG+ R I  A   R    + + +K      PPE  M    ++  D +S+G+LL
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM----PPEAFMEGIFTSKTDTWSFGVLL 235

Query: 59  LETFT-GKRP 67
            E F+ G  P
Sbjct: 236 WEIFSLGYMP 245

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 1   MTAHVGDFGLTRFIPEA--IRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILL 58
             A +GDFG+ R I  A   R    + + +K      PPE  M    ++  D +S+G+LL
Sbjct: 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM----PPEAFMEGIFTSKTDTWSFGVLL 276

Query: 59  LETFT-GKRP 67
            E F+ G  P
Sbjct: 277 WEIFSLGYMP 286

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 14/70 (20%)

Query: 5   VGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGILL 58
           V DFGL+R +   P+A  +     I ++ T     PE   +      S+  DV+S+G+++
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWT----APEAIAFR---TFSSASDVWSFGVVM 244

Query: 59  LETFT-GKRP 67
            E    G+RP
Sbjct: 245 WEVLAYGERP 254

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           +GDFGL+R++ +   S    +   K  + +  PE     R ++  DV+ +G+ + E    
Sbjct: 532 LGDFGLSRYMED---STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH 588

Query: 64  GKRP 67
           G +P
Sbjct: 589 GVKP 592

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 7/94 (7%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           +GD GL      A     S +  + GT  +  PE           DVY++G+ +LE  T 
Sbjct: 173 IGDLGL------ATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATS 225

Query: 65  KRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLF 98
           + P S+                P    +V  P  
Sbjct: 226 EYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL+R +        ++  G K  + +  PE    ++ S   DV+++G+LL E  T 
Sbjct: 152 VADFGLSRLMTG---DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208

Query: 64  GKRP 67
           G  P
Sbjct: 209 GMSP 212

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.1 bits (105), Expect = 5e-06
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 10/67 (14%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGILLLET 61
           +GDFGL+R++ +   S    +   K  + +  PE   +    R ++  DV+ +G+ + E 
Sbjct: 157 LGDFGLSRYMED---STYYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEI 210

Query: 62  FT-GKRP 67
              G +P
Sbjct: 211 LMHGVKP 217

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 43.8 bits (104), Expect = 6e-06
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)

Query: 5   VGDFGLTRFIPE----AIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           V DFGL R I +    +++ ++ + + +K T      E     R +T  DV+S+G+LL E
Sbjct: 165 VADFGLARDILDREYYSVQQHRHARLPVKWT----ALESLQTYRFTTKSDVWSFGVLLWE 220

Query: 61  TFT-GKRP 67
             T G  P
Sbjct: 221 LLTRGAPP 228

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 43.8 bits (103), Expect = 7e-06
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
               + DFGL R I             ++      P     PE       +   DV+S+G
Sbjct: 230 NVVKICDFGLARDI-------YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 282

Query: 56  ILLLETFT-GKRP 67
           +LL E F+ G  P
Sbjct: 283 VLLWEIFSLGASP 295

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 44.0 bits (104), Expect = 7e-06
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)

Query: 5   VGDFGLTRFI----PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           V DFGL R +     +++ +   + + +K        E     + +T  DV+S+G+LL E
Sbjct: 233 VADFGLARDMYDKEFDSVHNKTGAKLPVKWM----ALESLQTQKFTTKSDVWSFGVLLWE 288

Query: 61  TFT-GKRP 67
             T G  P
Sbjct: 289 LMTRGAPP 296

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 44.1 bits (104), Expect = 7e-06
 Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 9/63 (14%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + D G         R N    +   GT G+  PE       +   D+Y+ G  L      
Sbjct: 222 LIDLGAVS------RINSFGYLY--GTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLD 272

Query: 65  KRP 67
              
Sbjct: 273 LPT 275

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 43.8 bits (104), Expect = 7e-06
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 13/69 (18%)

Query: 5   VGDFGLTRFIPEA--IRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGILLL 59
           +GDFG++R I      R    + + ++      PPE   Y    + +T  DV+S+G++L 
Sbjct: 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWM----PPESILYR---KFTTESDVWSFGVVLW 251

Query: 60  ETFT-GKRP 67
           E FT GK+P
Sbjct: 252 EIFTYGKQP 260

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 14/74 (18%)

Query: 1   MTAHVGDFGLTRFI---PEAIRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSY 54
             A + DFGL++ +       ++       +K       PE   Y    + S+  DV+S+
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWY----APECINYY---KFSSKSDVWSF 206

Query: 55  GILLLETFT-GKRP 67
           G+L+ E F+ G++P
Sbjct: 207 GVLMWEAFSYGQKP 220

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 14/70 (20%)

Query: 5   VGDFGLTRFIPE---AIRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGILL 58
           + DFGL++ +        +  +    LK       PE   +    + S+  DV+SYG+ +
Sbjct: 151 ISDFGLSKALGADDSYYTARSAGKWPLKWY----APECINFR---KFSSRSDVWSYGVTM 203

Query: 59  LETFT-GKRP 67
            E  + G++P
Sbjct: 204 WEALSYGQKP 213

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 43.8 bits (103), Expect = 8e-06
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 5   VGDFGLTRFIPE---AIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           + DFGL++ +        +  +    LK       PE     + S+  DV+SYG+ + E 
Sbjct: 477 ISDFGLSKALGADDSYYTARSAGKWPLKWY----APECINFRKFSSRSDVWSYGVTMWEA 532

Query: 62  FT-GKRP 67
            + G++P
Sbjct: 533 LSYGQKP 539

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           +GDFGL R +P+            K    +  PE       S   D + +G+ L E FT 
Sbjct: 162 IGDFGLMRALPQNDDHYVMQE-HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 220

Query: 64  GKRP 67
           G+ P
Sbjct: 221 GQEP 224

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 10/67 (14%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGILLLET 61
           +GDFGL+R+I +    +   +   +  + +  PE   +    R +T  DV+ + + + E 
Sbjct: 154 LGDFGLSRYIED---EDYYKASVTRLPIKWMSPESINFR---RFTTASDVWMFAVCMWEI 207

Query: 62  FT-GKRP 67
            + GK+P
Sbjct: 208 LSFGKQP 214

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 13/69 (18%)

Query: 5   VGDFGLTRFIPEAI--RSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGILLL 59
           + D GL R +  A   +   +S + ++       PE   YG   + S   D++SYG++L 
Sbjct: 169 ISDLGLFREVYAADYYKLLGNSLLPIRWM----APEAIMYG---KFSIDSDIWSYGVVLW 221

Query: 60  ETFT-GKRP 67
           E F+ G +P
Sbjct: 222 EVFSYGLQP 230

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGL R + +    +  +  G K  V +   E     + +T  DV+S+G+LL E  T 
Sbjct: 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 228

Query: 64  GKRP 67
           G  P
Sbjct: 229 GAPP 232

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL + +       +  + G K  + +   E  +    +   DV+SYG+ + E  T 
Sbjct: 158 ITDFGLAKLLGAE--EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215

Query: 64  GKRP 67
           G +P
Sbjct: 216 GSKP 219

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 13/69 (18%)

Query: 5   VGDFGLTRFIPEA--IRSNQSSSIGLKGTVGYAPPE---YGMGSRVSTYGDVYSYGILLL 59
           +GDFG++R +      R    + + ++      PPE   Y    + +T  DV+S+G++L 
Sbjct: 174 IGDFGMSRDVYSTDYYRVGGHTMLPIRWM----PPESIMYR---KFTTESDVWSFGVILW 226

Query: 60  ETFT-GKRP 67
           E FT GK+P
Sbjct: 227 EIFTYGKQP 235

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
               + DFGL R I        +     K T G  P     PE       +   DV+S+G
Sbjct: 194 NVMKIADFGLARDI-------NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246

Query: 56  ILLLETFT-GKRP 67
           +L+ E FT G  P
Sbjct: 247 VLMWEIFTLGGSP 259

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 7   DFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG---DVYSYGILLLETFT 63
           DFGL + +     S    S G+ GT G+  PE              D++S G +     +
Sbjct: 166 DFGLCKKLAVGRHSFSRRS-GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224

Query: 64  GKRP 67
               
Sbjct: 225 EGSH 228

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 10/65 (15%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE-YGMGSRVSTYGDVYSYGILLLETFT 63
           + D G++  +             L+  + + PPE       ++   D +S+G  L E  +
Sbjct: 162 LSDPGISITV--------LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213

Query: 64  -GKRP 67
            G +P
Sbjct: 214 GGDKP 218

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
               + DFGL R I              K T G  P     PE       +   DV+S+G
Sbjct: 228 NVMKIADFGLARDI-------HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280

Query: 56  ILLLETFT-GKRP 67
           +LL E FT G  P
Sbjct: 281 VLLWEIFTLGGSP 293

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGLT+          S+    K  V +  PE     + ST  DV+S+GILL E ++ 
Sbjct: 158 VSDFGLTKEA-------SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 210

Query: 64  GKRP 67
           G+ P
Sbjct: 211 GRVP 214

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
               + DFGL R I        +     K T G  P     PE       +   DV+S+G
Sbjct: 240 NVMKIADFGLARDI-------NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292

Query: 56  ILLLETFT-GKRP 67
           +L+ E FT G  P
Sbjct: 293 VLMWEIFTLGGSP 305

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 13/69 (18%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYGILLL 59
           + DFGL R I       ++ S  +       P     PE       +   DV+SYGI L 
Sbjct: 186 ICDFGLARDI-------KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238

Query: 60  ETFT-GKRP 67
           E F+ G  P
Sbjct: 239 ELFSLGSSP 247

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 21/98 (21%), Positives = 31/98 (31%), Gaps = 20/98 (20%)

Query: 6   GDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE-----YGMGSRVSTYGDVYSYGILLLE 60
           GDFGL   +         +    +G   Y  PE     YG  +      DV+S G+ +LE
Sbjct: 199 GDFGLLVEL-----GTAGAGEVQEGDPRYMAPELLQGSYGTAA------DVFSLGLTILE 247

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLF 98
                         G       +  LP + +  L    
Sbjct: 248 VACNMEL----PHGGEGWQQLRQGYLPPEFTAGLSSEL 281

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFGLT+          S+    K  V +  PE     + ST  DV+S+GILL E ++ 
Sbjct: 330 VSDFGLTKEA-------SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 382

Query: 64  GKRP 67
           G+ P
Sbjct: 383 GRVP 386

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
             A +GDFGL R I        + S  +       P     PE       +   DV+SYG
Sbjct: 201 HVAKIGDFGLARDI-------MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253

Query: 56  ILLLETFT-GKRP 67
           ILL E F+ G  P
Sbjct: 254 ILLWEIFSLGLNP 266

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 11/66 (16%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG---DVYSYGILLLET 61
           +GD      +       +  +      V YAP E+ + +  +T+    + +  G+ +   
Sbjct: 235 LGDVSALWKVGT-----RGPASS--VPVTYAPREF-LNASTATFTHALNAWQLGLSIYRV 286

Query: 62  FTGKRP 67
           +    P
Sbjct: 287 WCLFLP 292

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 23/104 (22%), Positives = 34/104 (32%), Gaps = 15/104 (14%)

Query: 7   DFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVST----YG---DVYSYGILLL 59
           DFGL + +     S +++     GT G+  PE    S             D++S G +  
Sbjct: 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230

Query: 60  ETFT-GKRPTSD-------IFAEGLDLHNFVKNALPEQISEVLD 95
              + GK P  D       I      L           I+E  D
Sbjct: 231 YILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD 274

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
               + DFGL+R +             +K + G  P      E       +T  DV+S+G
Sbjct: 187 RKMKISDFGLSRDV-------YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239

Query: 56  ILLLETFT-GKRP 67
           +LL E  T G  P
Sbjct: 240 VLLWEIVTLGGNP 252

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 8/67 (11%)

Query: 5   VGDFGLTRFIP---EAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           + DFGL + +P   +     +     +        PE    +  S   DV+S+G++L E 
Sbjct: 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWY----APESLSDNIFSRQSDVWSFGVVLYEL 223

Query: 62  FT-GKRP 67
           FT   + 
Sbjct: 224 FTYCDKS 230

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           V DFG+   +P      Q      K  + +   E     + +   DV+SYG+ + E  T 
Sbjct: 156 VADFGVADLLPPD--DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTF 213

Query: 64  GKRP 67
           G  P
Sbjct: 214 GAEP 217

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
           MT  V DFGL+R I        S     +G     P      E    +  + + DV+++G
Sbjct: 174 MTVCVADFGLSRKI-------YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFG 226

Query: 56  ILLLETFT-GKRP 67
           + + E  T G+ P
Sbjct: 227 VTMWEIMTRGQTP 239

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 5   VGDFGLTRFIP---EAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           +GDFGLT+ I    E           +        PE  M S+     DV+S+G+ L E 
Sbjct: 167 IGDFGLTKAIETDKEYYTVKDDRDSPVFWY----APECLMQSKFYIASDVWSFGVTLHEL 222

Query: 62  FT-GKRPTS 69
            T     +S
Sbjct: 223 LTYCDSDSS 231

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 13/69 (18%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYGILLL 59
           + DFGL R I        S S  +       P     PE       +   DV+SYGILL 
Sbjct: 213 ICDFGLARDI-------MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265

Query: 60  ETFT-GKRP 67
           E F+ G  P
Sbjct: 266 EIFSLGVNP 274

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 40.8 bits (96), Expect = 6e-05
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 19/76 (25%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PE---YGMGSRVSTYGDVY 52
           M   + DFGL+R I        S+           P     PE   Y    R +T  DV+
Sbjct: 211 MVVKIADFGLSRNI-------YSADYYKADGNDAIPIRWMPPESIFYN---RYTTESDVW 260

Query: 53  SYGILLLETFT-GKRP 67
           +YG++L E F+ G +P
Sbjct: 261 AYGVVLWEIFSYGLQP 276

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 19/76 (25%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PE---YGMGSRVSTYGDVY 52
            T  +GDFG+TR I         +    KG  G  P     PE    G     +TY DV+
Sbjct: 175 FTVKIGDFGMTRDI-------YETDYYRKGGKGLLPVRWMSPESLKDG---VFTTYSDVW 224

Query: 53  SYGILLLETFT-GKRP 67
           S+G++L E  T  ++P
Sbjct: 225 SFGVVLWEIATLAEQP 240

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 40.7 bits (96), Expect = 7e-05
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
               + DFGL R I             ++      P     PE       +   DV+S+G
Sbjct: 185 NVVKICDFGLARDI-------YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237

Query: 56  ILLLETFT-GKRP 67
           +LL E F+ G  P
Sbjct: 238 VLLWEIFSLGASP 250

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT- 63
           + DFGL + +       +  + G K  + +   E  +    +   DV+SYG+ + E  T 
Sbjct: 158 ITDFGLAKLLGAE--EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215

Query: 64  GKRP 67
           G +P
Sbjct: 216 GSKP 219

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 40.3 bits (95), Expect = 8e-05
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 13/73 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAP-----PEYGMGSRVSTYGDVYSYG 55
           MT  V DFGL++ I        S     +G +   P      E       ++  DV+++G
Sbjct: 184 MTVCVADFGLSKKI-------YSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 236

Query: 56  ILLLETFT-GKRP 67
           + + E  T G  P
Sbjct: 237 VTMWEIATRGMTP 249

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 40.6 bits (95), Expect = 9e-05
 Identities = 24/103 (23%), Positives = 35/103 (33%), Gaps = 13/103 (12%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE--------YGMGSRVSTYG---DVYS 53
           + DFG+   +     S    S    G V Y PPE           G   S      DV+S
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQ--VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252

Query: 54  YGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDP 96
            G +L     GK P   I  +   LH  +      +  ++ + 
Sbjct: 253 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 295

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 13/101 (12%)

Query: 7   DFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE--------YGMGSRVSTYG---DVYSYG 55
           DFG+   +     S    S    GTV Y PPE           G   S      DV+S G
Sbjct: 150 DFGIANQMQPDTTSVVKDSQ--VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207

Query: 56  ILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDP 96
            +L     GK P   I  +   LH  +      +  ++ + 
Sbjct: 208 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 248

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 25/103 (24%), Positives = 36/103 (34%), Gaps = 13/103 (12%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPE--------YGMGSRVSTYG---DVYS 53
           + DFG+   +     S    S    GTV Y PPE           G   S      DV+S
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQ--VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224

Query: 54  YGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDP 96
            G +L     GK P   I  +   LH  +      +  ++ + 
Sbjct: 225 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK 267

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 7   DFGL-TRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGK 65
           DFG      P+ +  +  +   + GT  +  PE  MG       D++S   ++L    G 
Sbjct: 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253

Query: 66  RPTSDI 71
            P +  
Sbjct: 254 HPWTQY 259

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 5   VGDFGLTRFIP---EAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           +GDFGLT+ +P   E  +  +     +        PE    S+ S   DV+S+G++L E 
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWY----APESLTESKFSVASDVWSFGVVLYEL 210

Query: 62  FT 63
           FT
Sbjct: 211 FT 212

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 8/74 (10%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLK--------GTVGYAPPEYGMGSRVSTYGDVYSYGI 56
           VGDFGL   + +        +            GT  Y  PE   G+  S   D++S G+
Sbjct: 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGL 264

Query: 57  LLLETFTGKRPTSD 70
           +L E         +
Sbjct: 265 ILFELLYSFSTQME 278

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 8/69 (11%)

Query: 5   VGDFGLTRFIPEAI---RSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           +GDFGL + +PE     R  +     +        PE     +     DV+S+G+ L E 
Sbjct: 175 IGDFGLAKAVPEGHEYYRVREDGDSPVFWY----APECLKEYKFYYASDVWSFGVTLYEL 230

Query: 62  FT-GKRPTS 69
            T      S
Sbjct: 231 LTHCDSSQS 239

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 5   VGDFGLTRFIP---EAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           +GDFGLT+ +P   E  +  +     +        PE    S+ S   DV+S+G++L E 
Sbjct: 186 IGDFGLTKVLPQDKEYYKVKEPGESPIFWY----APESLTESKFSVASDVWSFGVVLYEL 241

Query: 62  FT 63
           FT
Sbjct: 242 FT 243

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
             A + DFGL+R   E         + ++        E    S  +T  DV+SYG+LL E
Sbjct: 179 YVAKIADFGLSRGQ-EVYVKKTMGRLPVRWM----AIESLNYSVYTTNSDVWSYGVLLWE 233

Query: 61  TFT-GKRP 67
             + G  P
Sbjct: 234 IVSLGGTP 241

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 19/74 (25%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEY--------GMGSRVSTYG---DVYS 53
           +  F         +R           + G+ PPE             R +      D ++
Sbjct: 247 LTGFEH------LVRDGARVVS--SVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298

Query: 54  YGILLLETFTGKRP 67
            G+++   +    P
Sbjct: 299 LGLVIYWIWCADLP 312

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	163
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.93
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.93
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.93
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.93
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.91
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.9
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.89
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.89
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.88
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.88
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.87
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.87
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.87
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.87
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.87
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.86
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.86
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.85
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.85
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.84
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.84
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.84
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.84
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.84
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.83
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.83
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.83
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.83
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.82
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.82
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.82
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.82
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.82
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.82
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.82
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.81
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.81
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.81
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.81
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.81
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.81
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.81
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.81
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.8
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.8
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.8
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.8
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.8
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.8
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.8
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.8
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.8
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.8
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.79
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.79
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.79
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.79
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.79
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.79
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.79
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.79
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.79
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.79
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.79
3niz_A	311	Rhodanese family protein; structural genomics, str	99.79
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.79
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.79
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.79
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.79
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.79
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.78
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.78
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.78
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.78
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.78
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.78
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.78
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.78
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.78
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.78
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.78
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.78
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.78
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.78
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.78
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.78
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.78
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.78
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.78
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.78
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.77
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.77
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.77
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.77
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.77
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.77
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.77
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.77
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.77
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.77
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.77
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.77
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.77
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.77
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.77
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.77
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.77
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.77
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.77
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.77
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.77
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.77
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.77
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.77
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.77
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.76
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.76
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.76
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.76
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.76
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.76
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.76
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.76
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.76
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.76
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.76
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.76
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.76
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.76
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.76
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.76
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.76
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.76
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.76
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.76
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.76
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.75
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.75
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.75
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.75
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.75
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.75
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.75
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.75
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.75
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.75
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.75
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.75
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.75
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.75
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.75
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.75
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.75
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.75
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.74
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.74
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.74
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.74
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.74
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.74
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.74
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.74
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.74
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.74
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.74
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.74
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.74
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.74
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.74
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.74
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.74
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.74
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.74
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.74
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.74
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.73
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.73
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.73
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.73
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.73
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.73
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.73
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.73
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.73
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.72
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.72
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.72
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.72
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.72
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.72
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.72
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.72
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.72
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.72
3bhy_A	283	Death-associated protein kinase 3; death associate	99.72
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.72
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.72
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.72
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.72
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.71
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.71
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.71
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.71
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.71
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.71
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.71
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.71
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.71
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.71
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.71
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.71
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.71
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.71
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.71
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.7
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.7
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.7
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.7
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.7
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.69
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.69
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.69
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.69
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.69
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.69
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.69
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.68
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.68
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.68
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.68
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.68
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.68
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.68
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.67
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.67
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.66
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.66
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.66
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.65
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.65
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.64
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.64
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.6
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.58
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.44
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.23
3uqc_A	286	Probable conserved transmembrane protein; structur	99.2
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.19
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.35

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.94  E-value=8.7e-28  Score=169.29  Aligned_cols=146  Identities=18%  Similarity=0.155  Sum_probs=88.0

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCC------CCccccceehhhHHHHHHHhCCCCCcccccc
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS------RVSTYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~------~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      .++||+|||+++................+||+.|+|||++.+.      .++.++|||||||+++|+++|..||......
T Consensus       145 ~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~  224 (303)
T 3hmm_A          145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccc
Confidence            3689999999987644322212223345799999999998653      3678899999999999999998877543221


Q ss_pred             CcchHHHHHh-cCchhhhh-hhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           75 GLDLHNFVKN-ALPEQISE-VLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        75 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .......... ........ ..........+.          ......+...+.+|+.+||+.||++||||.||++.|+.
T Consensus       225 ~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~----------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN----------RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG----------GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             cccchhcccccchHHHHHHHHhcccCCCCCCc----------cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            1111100000 00000111 111111111110          00112455678899999999999999999999999998


Q ss_pred             hHHH
Q 031224          153 VKST  156 (163)
Q Consensus       153 ~~~~  156 (163)
                      +.++
T Consensus       295 l~~~  298 (303)
T 3hmm_A          295 LSQQ  298 (303)
T ss_dssp             HHHC
T ss_pred             HHHH
Confidence            8764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.93  E-value=2e-27  Score=167.13  Aligned_cols=129  Identities=23%  Similarity=0.321  Sum_probs=83.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      ++||+|||+|+.......  .......+||+.|+|||++.+   ..|+.++|||||||+++|+++|+.||.+..... ..
T Consensus       170 ~~Ki~DFGla~~~~~~~~--~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~  246 (307)
T 3omv_A          170 TVKIGDFGLATVKSRWSG--SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QI  246 (307)
T ss_dssp             EEEECCCSSCBC--------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HH
T ss_pred             cEEEeeccCceecccCCc--ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HH
Confidence            689999999987643211  112234579999999999853   358999999999999999999999996532111 11


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      ...+....       ..+......                ..+...+.+|+.+||+.||++|||+.||++.|+.++.+
T Consensus       247 ~~~~~~~~-------~~p~~~~~~----------------~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~  301 (307)
T 3omv_A          247 IFMVGRGY-------ASPDLSKLY----------------KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             HHHHHTTC-------CCCCSTTSC----------------TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             HHHHhcCC-------CCCCccccc----------------ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence            11111110       001000000                02234567899999999999999999999999887654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=1.4e-27  Score=170.97  Aligned_cols=127  Identities=20%  Similarity=0.305  Sum_probs=90.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      ++||+|||+|+.+.....  ........||+.|+|||++.+..|+.++|||||||+++|+++ |+.||.+..... .+..
T Consensus       223 ~vKi~DFGlar~~~~~~~--~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-~~~~  299 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR  299 (353)
T ss_dssp             CEEECCCGGGSCTTTCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH
T ss_pred             CEEECcchhhhhcccCCC--ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-HHHH
Confidence            689999999987644311  112234578999999999988889999999999999999998 899997642211 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+.....        .    ..+.               .+...+.+++.+||+.||++|||+++|++.|+++.++..
T Consensus       300 ~i~~g~~--------~----~~p~---------------~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~  350 (353)
T 4ase_A          300 RLKEGTR--------M----RAPD---------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA  350 (353)
T ss_dssp             HHHHTCC--------C----CCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             HHHcCCC--------C----CCCc---------------cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence            1111100        0    0000               123346789999999999999999999999999877643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.93  E-value=6.2e-27  Score=166.38  Aligned_cols=124  Identities=24%  Similarity=0.374  Sum_probs=81.3

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLH   79 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~   79 (163)
                      .++||+|||+++.+.....  ........||+.|+|||++.+..|+.++|||||||++||+++ |+.||.+....  ...
T Consensus       195 ~~~Ki~DFGla~~~~~~~~--~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~  270 (329)
T 4aoj_A          195 LVVKIGDFGMSRDIYSTDY--YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAI  270 (329)
T ss_dssp             TEEEECCCC------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHH
T ss_pred             CcEEEcccccceeccCCCc--ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHH
Confidence            3689999999987643211  112233568999999999999899999999999999999998 89999754211  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ..+.....        .   . .+               ..+...+.+|+.+||+.||++|||++||++.|+.+.+
T Consensus       271 ~~i~~g~~--------~---~-~p---------------~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          271 DCITQGRE--------L---E-RP---------------RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HHHHHTCC--------C---C-CC---------------TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCC--------C---C-Cc---------------ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            11111000        0   0 00               0223456789999999999999999999999998765

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.93  E-value=3.4e-27  Score=166.38  Aligned_cols=121  Identities=22%  Similarity=0.321  Sum_probs=86.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      ++||+|||+++.......  ........||+.|+|||++.+..|+.++|||||||+++|+++ |..||.+....  ....
T Consensus       183 ~~Ki~DFGlar~~~~~~~--~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~  258 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADY--YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVE  258 (308)
T ss_dssp             CEEECCSCCBCGGGGGGC--BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHH
T ss_pred             CEEECCcccceeccCCCc--eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            689999999987643211  112234578999999999988899999999999999999998 89999764221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+...           ......                ..+...+.+|+.+||+.||++|||++||++.|++.
T Consensus       259 ~i~~~-----------~~~~~p----------------~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          259 MIRNR-----------QVLPCP----------------DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHTT-----------CCCCCC----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHcC-----------CCCCCc----------------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            11110           000000                02334577899999999999999999999999754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.93  E-value=4e-27  Score=165.38  Aligned_cols=124  Identities=22%  Similarity=0.356  Sum_probs=88.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      ++||+|||+|+.......  ........||+.|+|||++.+..|+.++|||||||+++|+++ |+.||.+....  ....
T Consensus       166 ~~Ki~DFGla~~~~~~~~--~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~  241 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIE  241 (299)
T ss_dssp             CEEECCCSCHHHHTGGGC--EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH
T ss_pred             cEEECCcccceecCCCCc--eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            689999999987643211  112223468999999999988899999999999999999998 89999764221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+...           ..... +               ..+...+.+|+.+||+.||++|||+++|+..|+++.+.
T Consensus       242 ~i~~~-----------~~~~~-p---------------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          242 CITQG-----------RVLQR-P---------------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHHHT-----------CCCCC-C---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHcC-----------CCCCC-C---------------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            11110           00000 0               02234567899999999999999999999999988764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.93  E-value=2.5e-26  Score=163.15  Aligned_cols=129  Identities=18%  Similarity=0.193  Sum_probs=87.8

Q ss_pred             ceeecccccccccCccccCC-CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSN-QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~-~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+|+.+....... .......+||+.|+|||++.+..|+.++||||+||+++||++|+.||.+.....  +..
T Consensus       189 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~  266 (336)
T 4g3f_A          189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCL  266 (336)
T ss_dssp             CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHH
T ss_pred             EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHH
Confidence            48999999999775431111 112233579999999999999889999999999999999999999997643322  111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+....+. .. .+.+                       .....+.+|+.+||+.||++|||+.|+++.|.....+.
T Consensus       267 ~i~~~~~~-~~-~~~~-----------------------~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~  318 (336)
T 4g3f_A          267 KIASEPPP-IR-EIPP-----------------------SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV  318 (336)
T ss_dssp             HHHHSCCG-GG-GSCT-----------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCC-ch-hcCc-----------------------cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence            11111000 00 0000                       12334677899999999999999999999998877654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.91  E-value=1.8e-25  Score=156.22  Aligned_cols=113  Identities=23%  Similarity=0.390  Sum_probs=77.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.....      .....+||+.|+|||++.+ .|+.++|||||||+++|+++|+.||.+..... .+...
T Consensus       170 ~vKl~DFGla~~~~~~------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~~  241 (290)
T 3fpq_A          170 SVKIGDLGLATLKRAS------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRR  241 (290)
T ss_dssp             CEEECCTTGGGGCCTT------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHH
T ss_pred             CEEEEeCcCCEeCCCC------ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHHH
Confidence            5899999999864321      2234689999999998864 69999999999999999999999996532110 11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +.....   ...++.                       .....+.+|+.+||+.||++|||++|+++
T Consensus       242 i~~~~~---~~~~~~-----------------------~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          242 VTSGVK---PASFDK-----------------------VAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HTTTCC---CGGGGG-----------------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHcCCC---CCCCCc-----------------------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111000   000000                       11223567899999999999999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.90  E-value=6.9e-25  Score=156.28  Aligned_cols=116  Identities=17%  Similarity=0.280  Sum_probs=81.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.+...    .......+||+.|+|||++.+..|+.++||||+||+++||++|+.||.+....  .....
T Consensus       208 ~vKl~DFGla~~~~~~----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~  281 (346)
T 4fih_A          208 RVKLSDFGFCAQVSKE----VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKM  281 (346)
T ss_dssp             CEEECCCTTCEECCSS----SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH
T ss_pred             CEEEecCcCceecCCC----CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHH
Confidence            5899999999876432    12234568999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +....        .+.+..                 .......+.+|+.+||+.||++|||++|+++
T Consensus       282 i~~~~--------~~~~~~-----------------~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          282 IRDNL--------PPRLKN-----------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHSS--------CCCCSC-----------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHcCC--------CCCCCc-----------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11110        000000                 0011234678999999999999999999976

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.89  E-value=6.1e-25  Score=156.78  Aligned_cols=114  Identities=20%  Similarity=0.264  Sum_probs=80.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.+...    .......+||+.|+|||++.+..|+.++||||+||+++||++|+.||.+...     ...
T Consensus       163 ~vKl~DFGla~~~~~~----~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~  233 (350)
T 4b9d_A          163 TVQLGDFGIARVLNST----VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-----KNL  233 (350)
T ss_dssp             CEEECSTTEESCCCHH----HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHH
T ss_pred             CEEEcccccceeecCC----cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHH
Confidence            5899999999876432    1112346799999999999988899999999999999999999999965321     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....        +.........                .....+.+|+.+||+.||++|||++|+++
T Consensus       234 ~~~i--------~~~~~~~~~~----------------~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          234 VLKI--------ISGSFPPVSL----------------HYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHH--------HHTCCCCCCT----------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHH--------HcCCCCCCCc----------------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1110        0000000000                11234677999999999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.89  E-value=3e-24  Score=156.51  Aligned_cols=116  Identities=17%  Similarity=0.255  Sum_probs=81.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.+...    .......+||+.|+|||++.+..|+.++||||+||+++||++|+.||.+....  .....
T Consensus       285 ~vKl~DFGla~~~~~~----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~  358 (423)
T 4fie_A          285 RVKLSDFGFCAQVSKE----VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKM  358 (423)
T ss_dssp             CEEECCCTTCEECCSS----CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH
T ss_pred             CEEEecCccceECCCC----CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHH
Confidence            5899999999876432    12234568999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +....        .+.+....                 .....+.+|+.+||..||++|||+.|+++
T Consensus       359 i~~~~--------~~~~~~~~-----------------~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          359 IRDNL--------PPRLKNLH-----------------KVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHSC--------CCCCSCTT-----------------SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHcCC--------CCCCcccc-----------------cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11110        01000000                 11234677999999999999999999976

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.88  E-value=2.3e-24  Score=156.70  Aligned_cols=142  Identities=14%  Similarity=0.095  Sum_probs=81.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCc-chH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGL-DLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~-~~~   79 (163)
                      .+||+|||+|+.+..............+||+.|+|||++.+.. ++.++||||+||+++||++|+.||.+...... ..+
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I  275 (398)
T 4b99_A          196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI  275 (398)
T ss_dssp             CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHH
T ss_pred             CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            5799999999876543222223334578999999999987765 68899999999999999999999976422110 011


Q ss_pred             HHHHhcCchhhhhhh-----ccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVL-----DPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .......+......+     ...+. ..+........    .........+.+|+.+||..||++|||+.|+++
T Consensus       276 ~~~~g~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          276 MMVLGTPSPAVIQAVGAERVRAYIQ-SLPPRQPVPWE----TVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             HHHHCCCCGGGTC-----CHHHHHH-SSCCCCCCCHH----HHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhcCCCChHHhhhhhhhhhhhhhh-cCCCcCCCCHH----HhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            000000000000000     00000 00000000000    001112345678999999999999999999976

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.88  E-value=1.1e-23  Score=146.00  Aligned_cols=112  Identities=20%  Similarity=0.275  Sum_probs=70.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+|+.....     ......+||+.|+|||++.+..+ +.++||||+||+++++++|+.||.+....  .+..
T Consensus       150 ~vkl~DFGla~~~~~~-----~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~  222 (275)
T 3hyh_A          150 NVKIADFGLSNIMTDG-----NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFK  222 (275)
T ss_dssp             CEEECCSSCC--------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH
T ss_pred             CEEEeecCCCeecCCC-----CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHH
Confidence            5899999999876432     12234679999999999988775 57899999999999999999999653111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+..           ....  .+.               .....+.+|+.+||+.||++|||++|+++
T Consensus       223 ~i~~-----------~~~~--~p~---------------~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          223 NISN-----------GVYT--LPK---------------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHH-----------TCCC--CCT---------------TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHc-----------CCCC--CCC---------------CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1111           0000  000               11233567899999999999999999986

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.87  E-value=2.4e-23  Score=146.29  Aligned_cols=116  Identities=23%  Similarity=0.321  Sum_probs=69.3

Q ss_pred             ceeecccccccccCccccCC--------CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSN--------QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~--------~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+|||+|+.+.......        .......+||+.|+|||++.+..|+.++||||+||+++||++   ||.....
T Consensus       156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~  232 (299)
T 4g31_A          156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME  232 (299)
T ss_dssp             CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred             cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH
Confidence            58999999999875431110        112234579999999999998889999999999999999985   6643211


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....+.......++                            ...........+|+.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~p----------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          233 RVRTLTDVRNLKFP----------------------------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHHHHHTTCCC----------------------------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhcCCCC----------------------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            00000000000000                            001122233467899999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.87  E-value=7.2e-23  Score=143.62  Aligned_cols=134  Identities=18%  Similarity=0.269  Sum_probs=86.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC------CCccccceehhhHHHHHHHhC----------C
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS------RVSTYGDVYSYGILLLETFTG----------K   65 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~------~~~~~~di~s~g~~~~e~~~g----------~   65 (163)
                      .+||+|||+++.................|++.|+|||.+.+.      .++.++||||||++++++++|          .
T Consensus       151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~  230 (301)
T 3q4u_A          151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK  230 (301)
T ss_dssp             CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence            589999999986543211111112234689999999998765      455789999999999999999          7


Q ss_pred             CCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           66 RPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        66 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                      .||.........................+..                  ..........+.+|+.+||+.||.+|||+.+
T Consensus       231 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~  292 (301)
T 3q4u_A          231 PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN------------------RWFSDPTLTSLAKLMKECWYQNPSARLTALR  292 (301)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG------------------GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             ccccccCCCCcchhhhhHHHhccCCCCCCCh------------------hhccCccHHHHHHHHHHHhhcChhhCCCHHH
Confidence            7776543332222222111100000000000                  0011144567889999999999999999999


Q ss_pred             HHHHHHHh
Q 031224          146 VVNNLQKV  153 (163)
Q Consensus       146 v~~~l~~~  153 (163)
                      +++.|+++
T Consensus       293 i~~~L~~i  300 (301)
T 3q4u_A          293 IKKTLTKI  300 (301)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhcc
Confidence            99999876

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.87  E-value=2e-23  Score=146.61  Aligned_cols=113  Identities=19%  Similarity=0.285  Sum_probs=77.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.....    .......+||+.|+|||++.+..|+.++|+||+||+++||++|+.||.+....  .....
T Consensus       164 ~vKl~DFGla~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~  237 (304)
T 3ubd_A          164 HIKLTDFGLSKESIDH----EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTM  237 (304)
T ss_dssp             CEEEESSEEEEC---------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEecccccceeccCC----CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--HHHHH
Confidence            5899999999865432    12223468999999999998888999999999999999999999999753211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH-----HHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI-----SDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~v~~  148 (163)
                      +...           ..  ..+.               .....+.+|+.+||+.||++|||+     +|+++
T Consensus       238 i~~~-----------~~--~~p~---------------~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          238 ILKA-----------KL--GMPQ---------------FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHC-----------CC--CCCT---------------TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HHcC-----------CC--CCCC---------------cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            1110           00  0000               112345779999999999999995     56654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=3.3e-22  Score=142.27  Aligned_cols=137  Identities=20%  Similarity=0.249  Sum_probs=85.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccc------cceehhhHHHHHHHhC----------C
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTY------GDVYSYGILLLETFTG----------K   65 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~------~di~s~g~~~~e~~~g----------~   65 (163)
                      .+||+|||+++.+...............|+..|+|||++.+..+...      +|||||||+++++++|          .
T Consensus       180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~  259 (337)
T 3mdy_A          180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ  259 (337)
T ss_dssp             CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence            58999999998765432221212234578999999999877655544      8999999999999999          5


Q ss_pred             CCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           66 RPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        66 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                      .||...................        .......+.          ......+...+.+|+.+||+.||++|||+.+
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~e  321 (337)
T 3mdy_A          260 LPYHDLVPSDPSYEDMREIVCI--------KKLRPSFPN----------RWSSDECLRQMGKLMTECWAHNPASRLTALR  321 (337)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTT--------SCCCCCCCG----------GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ccHhhhcCCCCchhhhHHHHhh--------hccCccccc----------cchhhHHHHHHHHHHHHhhhhChhhCCCHHH
Confidence            5554432222111111111000        000000000          0011145667889999999999999999999


Q ss_pred             HHHHHHHhHHH
Q 031224          146 VVNNLQKVKST  156 (163)
Q Consensus       146 v~~~l~~~~~~  156 (163)
                      +++.|+.+.++
T Consensus       322 ll~~L~~l~~~  332 (337)
T 3mdy_A          322 VKKTLAKMSES  332 (337)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHhh
Confidence            99999998875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.87  E-value=1.4e-23  Score=147.65  Aligned_cols=114  Identities=14%  Similarity=0.211  Sum_probs=79.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.+.....  .......+||+.|+|||++.+..|+.++|+||+||++++|++|+.||.+....  .+...
T Consensus       170 ~vKl~DFGla~~~~~~~~--~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~  245 (311)
T 4aw0_A          170 HIQITDFGTAKVLSPESK--QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--LIFAK  245 (311)
T ss_dssp             CEEECCCTTCEECCTTTT--CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEEEcCCceecCCCCC--cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            589999999997643211  22234568999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVV  147 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~  147 (163)
                      +..           ..+  ..+.               .....+.+|+.+||+.||++|||++|++
T Consensus       246 i~~-----------~~~--~~p~---------------~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          246 IIK-----------LEY--DFPE---------------KFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHH-----------TCC--CCCT---------------TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHc-----------CCC--CCCc---------------ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            110           000  0000               0122356789999999999999999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.86  E-value=1.3e-22  Score=145.99  Aligned_cols=69  Identities=25%  Similarity=0.343  Sum_probs=51.3

Q ss_pred             ceeecccccccccCcccc------------------------CCCcccccccccccccCCCCCCCCC-CccccceehhhH
Q 031224            2 TAHVGDFGLTRFIPEAIR------------------------SNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGI   56 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~------------------------~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~   56 (163)
                      .+||+|||+|+.......                        .........+||++|+|||++.+.. |+.++|+||+||
T Consensus       156 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~  235 (361)
T 4f9c_A          156 KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV  235 (361)
T ss_dssp             EEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             eEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence            479999999986533210                        0011123457999999999987765 889999999999


Q ss_pred             HHHHHHhCCCCCcc
Q 031224           57 LLLETFTGKRPTSD   70 (163)
Q Consensus        57 ~~~e~~~g~~p~~~   70 (163)
                      +++||++|+.||..
T Consensus       236 il~ell~G~~Pf~~  249 (361)
T 4f9c_A          236 IFLSLLSGRYPFYK  249 (361)
T ss_dssp             HHHHHHHTCSSSSC
T ss_pred             HHHHHHHCCCCCCC
Confidence            99999999999964

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.86  E-value=3.3e-22  Score=144.06  Aligned_cols=138  Identities=17%  Similarity=0.143  Sum_probs=94.7

Q ss_pred             ceeecccccccccCccccCC---CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.+.......   ........||+.|+|||++.+..++.++|||||||+++++++|+.||.+..... ..
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-~~  270 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-KY  270 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-HH
Confidence            57999999998765432111   111234558999999999988889999999999999999999999997532221 11


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      ...............+++.+...                  .....+.+++..||+.||.+||++.+|++.|+++.+...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~  332 (364)
T 3op5_A          271 VRDSKIRYRENIASLMDKCFPAA------------------NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG  332 (364)
T ss_dssp             HHHHHHHHHHCHHHHHHHHSCTT------------------CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhhhhHHHHHHHhcccc------------------cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            11111112222233333222111                  123457789999999999999999999999999887653

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.85  E-value=8.3e-22  Score=139.80  Aligned_cols=143  Identities=20%  Similarity=0.199  Sum_probs=90.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-----CCccccceehhhHHHHHHHhCCCCCccccccC-
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-----RVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-   75 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-----~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-   75 (163)
                      .+||+|||+++.+.....  ........|+..|+|||++.+.     .++.++|||||||+++++++|+.||.+..... 
T Consensus       169 ~~kL~DFg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~  246 (322)
T 3soc_A          169 TACIADFGLALKFEAGKS--AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM  246 (322)
T ss_dssp             CEEECCCTTCEEECTTSC--CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCC
T ss_pred             eEEEccCCcccccccccC--ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhc
Confidence            589999999987654321  1112235689999999998763     45678899999999999999999997643321 


Q ss_pred             cchHHHHHhc-Cchhhhhhh-ccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           76 LDLHNFVKNA-LPEQISEVL-DPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        76 ~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .......... ........+ ..........          ..........+.+|+.+||+.||++|||+.++++.|+.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRD----------YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCG----------GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cchhhhhccCCchhhhhhhhhcccCCCCccc----------cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            1111111110 001111111 1111000000          001113455688999999999999999999999999998


Q ss_pred             HHH
Q 031224          154 KST  156 (163)
Q Consensus       154 ~~~  156 (163)
                      .+.
T Consensus       317 ~~~  319 (322)
T 3soc_A          317 QRL  319 (322)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.85  E-value=1.1e-21  Score=137.24  Aligned_cols=134  Identities=17%  Similarity=0.140  Sum_probs=91.9

Q ss_pred             ceeecccccccccCccccCC---CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCc-c
Q 031224            2 TAHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL-D   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~-~   77 (163)
                      .+||+|||+++.........   ........|+..|+|||.+.+..++.++|||||||+++++++|+.||.+...... .
T Consensus       146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 4hgt_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence            47999999998765432111   1122345689999999999888899999999999999999999999976433211 1


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ....+...   ........                    ........+.+++.+||+.||++|||++++++.|+++.++.
T Consensus       226 ~~~~~~~~---~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          226 KYERISEK---KMSTPIEV--------------------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHHHHHH---HHHSCHHH--------------------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhcc---cccchhhh--------------------hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence            11111110   00000000                    00011345778999999999999999999999999998876


Q ss_pred             H
Q 031224          158 L  158 (163)
Q Consensus       158 ~  158 (163)
                      .
T Consensus       283 ~  283 (296)
T 4hgt_A          283 G  283 (296)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.84  E-value=1.2e-21  Score=138.74  Aligned_cols=137  Identities=26%  Similarity=0.437  Sum_probs=92.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC-cchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~~~~   80 (163)
                      .+||+|||+++.......  ........|+..|+|||.+.+..++.++|+||||++++++++|+.||....... .....
T Consensus       177 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~  254 (321)
T 2qkw_B          177 VPKITDFGISKKGTELDQ--THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE  254 (321)
T ss_dssp             CEEECCCTTCEECSSSSC--CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHH
T ss_pred             CEEEeecccccccccccc--cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHH
Confidence            579999999986543211  111233458999999999887789999999999999999999999997644322 12221


Q ss_pred             HHHhc-CchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNA-LPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      +.... ........+++....               .........+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          255 WAVESHNNGQLEQIVDPNLAD---------------KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HTHHHHTTTCCCSSSSSSCTT---------------CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HhhhccccccHHHhcChhhcc---------------ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            11110 011111111111111               1123556678899999999999999999999999998865

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.84  E-value=1.5e-21  Score=136.64  Aligned_cols=134  Identities=17%  Similarity=0.149  Sum_probs=91.3

Q ss_pred             ceeecccccccccCccccCC---CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC-cc
Q 031224            2 TAHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~   77 (163)
                      .+||+|||+++.........   ........|+..|+|||.+.+..++.++||||||++++++++|+.||....... ..
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 3uzp_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence            47999999998765432111   011234568999999999988889999999999999999999999997643221 11


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ....+...   ........ .                   .......+.+++.+||+.||++|||++++++.|+++.++.
T Consensus       226 ~~~~~~~~---~~~~~~~~-~-------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          226 KYERISEK---KMSTPIEV-L-------------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHHHHHH---HHHSCHHH-H-------------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hhhhhccc---ccCCchHH-H-------------------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence            11111110   00000000 0                   0012344778999999999999999999999999988765


Q ss_pred             H
Q 031224          158 L  158 (163)
Q Consensus       158 ~  158 (163)
                      .
T Consensus       283 ~  283 (296)
T 3uzp_A          283 G  283 (296)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.84  E-value=1e-21  Score=140.00  Aligned_cols=137  Identities=19%  Similarity=0.206  Sum_probs=88.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC------CCccccceehhhHHHHHHHhC----------C
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS------RVSTYGDVYSYGILLLETFTG----------K   65 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~------~~~~~~di~s~g~~~~e~~~g----------~   65 (163)
                      .+||+|||+++.................|+..|+|||.+.+.      .++.++||||||++++++++|          .
T Consensus       185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            579999999987643211111122335689999999998664      233689999999999999998          6


Q ss_pred             CCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           66 RPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        66 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                      .||..................        ........+..          .........+.+|+.+||+.||++|||+.+
T Consensus       265 ~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~  326 (342)
T 1b6c_B          265 LPYYDLVPSDPSVEEMRKVVC--------EQKLRPNIPNR----------WQSCEALRVMAKIMRECWYANGAARLTALR  326 (342)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHT--------TSCCCCCCCGG----------GGTSHHHHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             cCccccCcCcccHHHHHHHHH--------HHHhCCCCccc----------ccchhHHHHHHHHHHHHhccChhhCCCHHH
Confidence            677554322222222111111        11111111000          011245667889999999999999999999


Q ss_pred             HHHHHHHhHHH
Q 031224          146 VVNNLQKVKST  156 (163)
Q Consensus       146 v~~~l~~~~~~  156 (163)
                      +++.|+.+.++
T Consensus       327 i~~~L~~i~~~  337 (342)
T 1b6c_B          327 IKKTLSQLSQQ  337 (342)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHH
Confidence            99999998765

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.84  E-value=8.1e-22  Score=138.07  Aligned_cols=134  Identities=17%  Similarity=0.137  Sum_probs=91.0

Q ss_pred             eeecccccccccCccccCC---CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            3 AHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      +||+|||+++.........   ........|+..|+|||.+.+..++.++||||||++++++++|+.||.......  ..
T Consensus       150 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~  227 (298)
T 1csn_A          150 IYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT--NK  227 (298)
T ss_dssp             EEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC--HH
T ss_pred             EEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc--cH
Confidence            8999999998765432111   012234568999999999988889999999999999999999999997643211  11


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .................                    ........+.+++.+||+.||++|||+++|++.|+++.++..
T Consensus       228 ~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          228 QKYERIGEKKQSTPLRE--------------------LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             HHHHHHHHHHHHSCHHH--------------------HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhhccCccHHH--------------------HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence            11110000000000000                    000223457789999999999999999999999999988754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.83  E-value=1.2e-21  Score=148.42  Aligned_cols=116  Identities=23%  Similarity=0.252  Sum_probs=81.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...     ......+||+.|+|||++.+..|+.++||||+||++++|++|..||.+.....  ....
T Consensus       295 ~vKl~DFG~a~~~~~~-----~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~--~~~~  367 (573)
T 3uto_A          295 ELKLIDFGLTAHLDPK-----QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--TLRN  367 (573)
T ss_dssp             CEEECCCSSCEECCTT-----SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHH
T ss_pred             CEEEeeccceeEccCC-----CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHH
Confidence            4799999999987432     22234579999999999999889999999999999999999999996532211  1111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +..... .    +.....                   ......+.+|+.+||+.||.+|||+.|+++
T Consensus       368 i~~~~~-~----~~~~~~-------------------~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          368 VKSCDW-N----MDDSAF-------------------SGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHTTCC-C----CCSGGG-------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHhCCC-C----CCcccc-------------------cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111000 0    000000                   011234578899999999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.83  E-value=2.3e-21  Score=137.53  Aligned_cols=133  Identities=30%  Similarity=0.515  Sum_probs=90.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccc---cCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFA---EGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~---~~~~~   78 (163)
                      .+||+|||+++......   ........|++.|+|||++.+..++.++||||+|++++++++|..||.....   .....
T Consensus       172 ~~kl~Dfg~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  248 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKD---THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML  248 (326)
T ss_dssp             CEEECCCSSCEECCSSS---SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred             CEEeccCccccccCccc---ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence            58999999998764321   1122334589999999998777889999999999999999999999964321   12222


Q ss_pred             HHHHHhcCch-hhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           79 HNFVKNALPE-QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        79 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      ..+....... ......+.....               .........+.+++.+||+.||.+|||+.+|++.|+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          249 LDWVKGLLKEKKLEALVDVDLQG---------------NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             HHHHTTTTSSCCSTTSSCTTCTT---------------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHHhhchhhhhhcChhhcc---------------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            2222222111 111122211111               1123556778999999999999999999999999974

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.83  E-value=1.4e-21  Score=137.84  Aligned_cols=132  Identities=22%  Similarity=0.325  Sum_probs=89.1

Q ss_pred             ceeecccccccccCccccCCC----------cccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQ----------SSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~----------~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++..........          .......|++.|+|||.+.+..++.++||||||++++++++|..|+...
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          146 NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             CEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             CEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence            489999999987643311100          0111456899999999998888999999999999999999999988654


Q ss_pred             cccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           72 FAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ...........        ....+.....                   .....+.+++.+||+.||++|||+.++++.|+
T Consensus       226 ~~~~~~~~~~~--------~~~~~~~~~~-------------------~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~  278 (310)
T 3s95_A          226 LPRTMDFGLNV--------RGFLDRYCPP-------------------NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE  278 (310)
T ss_dssp             SCBCTTSSBCH--------HHHHHHTCCT-------------------TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hhhHHHHhhhh--------hccccccCCC-------------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            32221111100        0011111000                   11233677999999999999999999999999


Q ss_pred             HhHHHHHhc
Q 031224          152 KVKSTLLRC  160 (163)
Q Consensus       152 ~~~~~~~~~  160 (163)
                      .+...+...
T Consensus       279 ~l~~~~~~~  287 (310)
T 3s95_A          279 TLRMHLAGH  287 (310)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHhccCc
Confidence            999877643

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.82  E-value=1.7e-20  Score=131.93  Aligned_cols=134  Identities=26%  Similarity=0.415  Sum_probs=89.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.......  ........|+..|+|||.+.+ .++.++|+||||++++++++|..||........ ....
T Consensus       171 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~  246 (307)
T 2nru_A          171 TAKISDFGLARASEKFAQ--TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDI  246 (307)
T ss_dssp             CEEECCCTTCEECCSCSS--CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHH
T ss_pred             cEEEeecccccccccccc--cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHH
Confidence            579999999987543211  111223468999999998754 578899999999999999999999976433221 1111


Q ss_pred             HHh--cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           82 VKN--ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        82 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ...  .....+...+++.....                .......+..++.+||+.||.+|||+.++++.|+.+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          247 KEEIEDEEKTIEDYIDKKMNDA----------------DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHTTSCCHHHHSCSSCSCC----------------CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHhhhhhhhhhhhcccccccc----------------chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            110  11112222233222111                12445668889999999999999999999999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.82  E-value=2.8e-21  Score=136.47  Aligned_cols=126  Identities=22%  Similarity=0.269  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||.+.+..++.++||||||++++++++|..||.+.....  ....
T Consensus       177 ~~kL~Dfg~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~  250 (309)
T 3p86_A          177 TVKVCDFGLSRLKAST----FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAA  250 (309)
T ss_dssp             CEEECCCC---------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHH
T ss_pred             cEEECCCCCCcccccc----ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence            5899999999865332    111233568999999999988889999999999999999999999996532111  1110


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      +....         ..  ...+               ......+.+|+.+||+.||.+|||+.++++.|+.+.+....
T Consensus       251 ~~~~~---------~~--~~~~---------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p  302 (309)
T 3p86_A          251 VGFKC---------KR--LEIP---------------RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP  302 (309)
T ss_dssp             HHHSC---------CC--CCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred             HHhcC---------CC--CCCC---------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence            00000         00  0000               01123467899999999999999999999999999876543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.82  E-value=7.8e-21  Score=137.25  Aligned_cols=126  Identities=22%  Similarity=0.348  Sum_probs=87.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......+++.|+|||++.+..++.++|+|||||+++|+++ |..||.+....  ....
T Consensus       241 ~~kl~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~~~~  316 (370)
T 2psq_A          241 VMKIADFGLARDINNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFK  316 (370)
T ss_dssp             CEEECCCSSCEETTCCCTT--CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred             CEEEccccCCcccCcccce--ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            5799999999876432111  11223456788999999988889999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+.....            ...+               ......+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus       317 ~~~~~~~------------~~~~---------------~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~  367 (370)
T 2psq_A          317 LLKEGHR------------MDKP---------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  367 (370)
T ss_dssp             HHHTTCC------------CCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHhcCCC------------CCCC---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            1111000            0000               0123346789999999999999999999999999887543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.82  E-value=3.7e-21  Score=136.91  Aligned_cols=148  Identities=16%  Similarity=0.157  Sum_probs=87.9

Q ss_pred             ceeecccccccccCccccC----CCcccccccccccccCCCCCCC-------CCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRS----NQSSSIGLKGTVGYAPPEYGMG-------SRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~----~~~~~~~~~g~~~y~~pe~~~~-------~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.+......    .........||..|+|||++.+       ..++.++|||||||+++++++|..|+..
T Consensus       158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            5899999999876532111    1112223568999999999876       3466789999999999999999776643


Q ss_pred             ccc-cCc--chHHHHHhc-Cchhhhhhhc-cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           71 IFA-EGL--DLHNFVKNA-LPEQISEVLD-PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        71 ~~~-~~~--~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                      ... ...  ......... ........+. .......+...         .........+.+|+.+||+.||++|||+.|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  308 (336)
T 3g2f_A          238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW---------KENSLAVRSLKETIEDCWDQDAEARLTAQX  308 (336)
T ss_dssp             TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC---------CCCSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc---------ccccchHHHHHHHHHHHhcCChhhCcchHH
Confidence            221 111  111100000 0001111110 00001111000         001134556889999999999999999999


Q ss_pred             HHHHHHHhHHHHH
Q 031224          146 VVNNLQKVKSTLL  158 (163)
Q Consensus       146 v~~~l~~~~~~~~  158 (163)
                      +++.|+.+.+.+.
T Consensus       309 ~l~~L~~ll~~~~  321 (336)
T 3g2f_A          309 AEERMAELMMIWE  321 (336)
T ss_dssp             HHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887544

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.82  E-value=8.1e-22  Score=139.60  Aligned_cols=145  Identities=18%  Similarity=0.206  Sum_probs=91.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++........ ........++..|+|||.+.+..++.++|+||+|++++++++|..||.............
T Consensus       172 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~  250 (318)
T 3lxp_A          172 LVKIGDFGLAKAVPEGHEY-YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI  250 (318)
T ss_dssp             CEEECCGGGCEECCTTCSE-EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCS
T ss_pred             CEEECCccccccccccccc-cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcc
Confidence            4799999999876543111 111223457888999999987788899999999999999999999986432110000000


Q ss_pred             HHhcC-chhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHhc
Q 031224           82 VKNAL-PEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRC  160 (163)
Q Consensus        82 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~~  160 (163)
                      ..... .......+........+               ......+.+|+.+||+.||.+|||+.++++.|+.+.+++..+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~  315 (318)
T 3lxp_A          251 AQGQMTVLRLTELLERGERLPRP---------------DKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ  315 (318)
T ss_dssp             CCHHHHHHHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred             cccchhHHHHHHHHhcccCCCCC---------------ccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence            00000 00111111111110000               022345788999999999999999999999999999998876


Q ss_pred             cC
Q 031224          161 GI  162 (163)
Q Consensus       161 ~~  162 (163)
                      .+
T Consensus       316 ~p  317 (318)
T 3lxp_A          316 AP  317 (318)
T ss_dssp             --
T ss_pred             CC
Confidence            54

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.82  E-value=8.5e-21  Score=134.94  Aligned_cols=132  Identities=14%  Similarity=0.107  Sum_probs=89.7

Q ss_pred             eeecccccccccCccccCC---CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            3 AHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      +||+|||+++.+.......   ........||..|+|||++.+..++.++|+||||++++++++|..||.+.....  ..
T Consensus       149 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~  226 (330)
T 2izr_A          149 IHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LK  226 (330)
T ss_dssp             EEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HH
T ss_pred             EEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HH
Confidence            8999999998764431111   111234678999999999988889999999999999999999999997643221  11


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ...............+                .    ...... .+.+++..||+.||.+||++.+|.+.|+++.+..
T Consensus       227 ~~~~~i~~~~~~~~~~----------------~----~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          227 ERYQKIGDTKRATPIE----------------V----LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HHHHHHHHHHHHSCHH----------------H----HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhhccCCHH----------------H----HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            1111100000000000                0    000112 5788999999999999999999999999887765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.82  E-value=5.9e-21  Score=136.59  Aligned_cols=133  Identities=16%  Similarity=0.179  Sum_probs=87.1

Q ss_pred             ceeecccccccccCccccC---CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.+......   .........|+..|+|||++.+..++.++|||||||+++++++|+.||..........
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~  270 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV  270 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence            5899999999876543111   1112234578999999999988889999999999999999999999996532221111


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ..... .........+......                  ......+.+++.+||+.||++|||+.+|++.|+++
T Consensus       271 ~~~~~-~~~~~~~~~~~~~~~~------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          271 QTAKT-NLLDELPQSVLKWAPS------------------GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHH-HHHHTTTHHHHHHSCT------------------TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             HHHHH-hhcccccHHHHhhccc------------------cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            11111 0001111111000000                  01234577899999999999999999999999764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.81  E-value=1.3e-20  Score=135.14  Aligned_cols=138  Identities=14%  Similarity=0.125  Sum_probs=91.2

Q ss_pred             ceeecccccccccCccccC---CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.+......   .........|++.|+|||++.+..++.++|+||||++++++++|+.||..........
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  278 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDI  278 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHH
Confidence            5899999999876543211   1112233478999999999988889999999999999999999999997643221111


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      ...... +........+.....                  ......+.+++.+||+.||++|||++++++.|+.+.++..
T Consensus       279 ~~~~~~-~~~~~~~~~~~~~~~------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          279 MKQKQK-FVDKPGPFVGPCGHW------------------IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHHHH-HHHSCCCEECTTSCE------------------ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHh-ccCChhhhhhhcccc------------------CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            111100 000000000000000                  0112446789999999999999999999999999987754

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.81  E-value=8.8e-21  Score=132.26  Aligned_cols=119  Identities=24%  Similarity=0.392  Sum_probs=81.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC--CCCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM--GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~--~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++....       ......|+..|+|||.+.  ...++.++|+||+|++++++++|+.||...........
T Consensus       167 ~~kl~Dfg~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~  239 (287)
T 4f0f_A          167 CAKVADFGLSQQSVH-------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI  239 (287)
T ss_dssp             CEEECCCTTCBCCSS-------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH
T ss_pred             eEEeCCCCccccccc-------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH
Confidence            389999999975432       122356899999999984  34478899999999999999999999965432221111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ......       ...+.+..                   .....+.+++.+||+.||.+|||++++++.|+++
T Consensus       240 ~~~~~~-------~~~~~~~~-------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          240 NMIREE-------GLRPTIPE-------------------DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHS-------CCCCCCCT-------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHhcc-------CCCCCCCc-------------------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            111110       00000000                   1223467899999999999999999999999764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.81  E-value=5.9e-21  Score=134.60  Aligned_cols=121  Identities=24%  Similarity=0.373  Sum_probs=79.6

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFV   82 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~   82 (163)
                      +||+|||+++.....       .....|+..|+|||.+.+..++.++||||||++++++++|+.||..............
T Consensus       145 ~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~  217 (307)
T 2eva_A          145 LKICDFGTACDIQTH-------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV  217 (307)
T ss_dssp             EEECCCCC-------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHH
T ss_pred             EEEcccccccccccc-------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHH
Confidence            799999999765321       1223589999999999888899999999999999999999999965322111110000


Q ss_pred             HhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           83 KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ....        .+....                   .....+.+++.+||+.||++|||++++++.|+.+.+.+
T Consensus       218 ~~~~--------~~~~~~-------------------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          218 HNGT--------RPPLIK-------------------NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             HTTC--------CCCCBT-------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             hcCC--------CCCccc-------------------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence            0000        000000                   11234677999999999999999999999999887644

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.81  E-value=5.6e-21  Score=137.13  Aligned_cols=126  Identities=20%  Similarity=0.312  Sum_probs=87.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+.....  ........|+..|+|||++.+..++.++||||||++++++++ |..||.+..... ....
T Consensus       231 ~~kl~Dfg~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~  307 (359)
T 3vhe_A          231 VVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR  307 (359)
T ss_dssp             CEEECCCGGGSCTTSCTT--CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH
T ss_pred             cEEEEeccceeeeccccc--chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHH
Confidence            579999999987643211  112233457889999999888889999999999999999998 999996542211 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+....        ..    ..+.               .....+.+++.+||+.||.+|||+.++++.|+++.+..
T Consensus       308 ~~~~~~--------~~----~~~~---------------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          308 RLKEGT--------RM----RAPD---------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHHHTC--------CC----CCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHcCC--------CC----CCCC---------------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            111100        00    0000               11234678899999999999999999999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.81  E-value=2.7e-21  Score=135.17  Aligned_cols=128  Identities=23%  Similarity=0.355  Sum_probs=77.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.......  ........|+..|+|||.+.   ...++.++||||+|++++++++|+.||.+..... ..
T Consensus       158 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~  234 (289)
T 3og7_A          158 TVKIGDFGLATEKSRWSG--SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QI  234 (289)
T ss_dssp             EEEECCCC--------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HH
T ss_pred             CEEEccceeccccccccc--cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HH
Confidence            479999999986543211  11122346899999999886   4567889999999999999999999996542211 11


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ...+...       ...+......                ......+.+|+.+||+.||++|||+.++++.|+++.+
T Consensus       235 ~~~~~~~-------~~~~~~~~~~----------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          235 IEMVGRG-------SLSPDLSKVR----------------SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHT-------SCCCCTTSSC----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHhccc-------ccCcchhhcc----------------ccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            1111110       0000000000                0223457789999999999999999999999998754

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.81  E-value=1.4e-20  Score=139.95  Aligned_cols=134  Identities=16%  Similarity=0.159  Sum_probs=91.3

Q ss_pred             ceeecccccccccCccccCC---CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.+.......   ........|+..|++||++.+..++.++|||||||+++++++|+.||.+.....  .
T Consensus       144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~--~  221 (483)
T 3sv0_A          144 QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT--K  221 (483)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS--H
T ss_pred             eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh--H
Confidence            58999999998765432111   111224678999999999988889999999999999999999999997643221  1


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ...............+..                    ........+.+|+..||+.||++||++.+|++.|+.+....
T Consensus       222 ~~~~~~i~~~~~~~~~~~--------------------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          222 KQKYEKISEKKVATSIEA--------------------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             HHHHHHHHHHHHHSCHHH--------------------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhccccccHHH--------------------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            111111100111110000                    00122345788999999999999999999999999987653

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.81  E-value=1.3e-20  Score=143.69  Aligned_cols=113  Identities=15%  Similarity=0.198  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcc-hH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD-LH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~-~~   79 (163)
                      .+||+|||+|+.+...      .....+||+.|+|||++.. ..|+.++|+||+||+++||++|..||.+....... +.
T Consensus       330 ~vKL~DFGlA~~~~~~------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~  403 (689)
T 3v5w_A          330 HVRISDLGLACDFSKK------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID  403 (689)
T ss_dssp             CEEECCCTTCEECSSC------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH
T ss_pred             CEEecccceeeecCCC------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            5899999999876432      1234589999999999865 46999999999999999999999999764322211 11


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~  148 (163)
                      ..+...         ...+..                   .....+.+|+.+||+.||.+|++     ++||++
T Consensus       404 ~~i~~~---------~~~~p~-------------------~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          404 RMTLTM---------AVELPD-------------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHHHHC---------CCCCCT-------------------TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             HhhcCC---------CCCCCc-------------------cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            111000         000000                   11233578999999999999998     677754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=2.5e-20  Score=130.51  Aligned_cols=130  Identities=25%  Similarity=0.308  Sum_probs=88.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.................++..|++||.+.+..++.++|+||+|++++++++|..|+..... .......
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~  240 (298)
T 3pls_A          162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHF  240 (298)
T ss_dssp             CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHH
T ss_pred             cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHH
Confidence            589999999987654322222223345678899999999888899999999999999999996555432211 1111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      +.....            ...+.               .....+.+++.+||+.||.+|||+.++++.|+++.+++..
T Consensus       241 ~~~~~~------------~~~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~  291 (298)
T 3pls_A          241 LAQGRR------------LPQPE---------------YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG  291 (298)
T ss_dssp             HHTTCC------------CCCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred             hhcCCC------------CCCCc---------------cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence            111100            00000               1123467899999999999999999999999999887643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.80  E-value=7.4e-21  Score=135.18  Aligned_cols=124  Identities=19%  Similarity=0.302  Sum_probs=84.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++||||||++++++++ |+.||.+....  ....
T Consensus       155 ~~kl~Dfg~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~  230 (327)
T 3poz_A          155 HVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS  230 (327)
T ss_dssp             EEEECCTTHHHHHTTTCC---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH
T ss_pred             CEEEccCcceeEccCCccc--ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHH
Confidence            5799999999876443211  11223456788999999988889999999999999999999 99999653221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....            ...+               ......+..++.+||+.||.+|||+.++++.|+.+...
T Consensus       231 ~~~~~~~------------~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          231 ILEKGER------------LPQP---------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHTTCC------------CCCC---------------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHcCCC------------CCCC---------------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            1111100            0000               01223467899999999999999999999999988653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=7.9e-21  Score=137.35  Aligned_cols=128  Identities=25%  Similarity=0.364  Sum_probs=78.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+...............++..|+|||.+.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       230 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~  307 (373)
T 3c1x_A          230 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITV  307 (373)
T ss_dssp             CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHH
T ss_pred             CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHH
Confidence            58999999998764331111112223456788999999888889999999999999999999 67777553221  1221


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+.....     ...       +.               .....+.+++.+||+.||++|||+.++++.|+++..++.
T Consensus       308 ~~~~~~~-----~~~-------p~---------------~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          308 YLLQGRR-----LLQ-------PE---------------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             HHHTTCC-----CCC-------CT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHcCCC-----CCC-------CC---------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            1111100     000       00               112346789999999999999999999999999887653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.80  E-value=4.9e-20  Score=132.00  Aligned_cols=148  Identities=19%  Similarity=0.164  Sum_probs=83.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCc-chH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL-DLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~-~~~   79 (163)
                      .+||+|||+++.+...............|++.|+|||++.+. .++.++||||+||+++++++|..||.+...... ...
T Consensus       162 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  241 (351)
T 3mi9_A          162 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI  241 (351)
T ss_dssp             CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            579999999987653322222233445789999999988764 478999999999999999999999976422110 111


Q ss_pred             HHHHhcCch-hhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPE-QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .......+. .+...-..............................+.+|+.+||+.||++|||++|+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          242 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             HHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            111111111 1111100000000000000000000000000112346789999999999999999999863

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.80  E-value=2.9e-20  Score=131.58  Aligned_cols=143  Identities=11%  Similarity=0.085  Sum_probs=85.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC--------CCCCccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM--------GSRVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~--------~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+|||+++......     ......|+..|+|||++.        +..++.++|||||||+++++++|+.||.....
T Consensus       154 ~~kL~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  228 (319)
T 4euu_A          154 VYKLTDFGAARELEDDE-----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG  228 (319)
T ss_dssp             EEEECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred             eEEEccCCCceecCCCC-----ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence            37999999998764431     122346899999999875        45688999999999999999999999965432


Q ss_pred             cCc--chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           74 EGL--DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        74 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ...  .....+....+......+...............   ............+.+++.+||+.||++|||++|+++...
T Consensus       229 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          229 PRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMP---VSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             GGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCC---TTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             cchhHHHHHHHhcCCCcccchhhhcccCCccccCccCC---cccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            111  111111111111000000000000000000000   000112344556788999999999999999999998876


Q ss_pred             H
Q 031224          152 K  152 (163)
Q Consensus       152 ~  152 (163)
                      .
T Consensus       306 d  306 (319)
T 4euu_A          306 D  306 (319)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.80  E-value=1e-20  Score=132.88  Aligned_cols=116  Identities=19%  Similarity=0.230  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......    .......|++.|+|||.+.+..++.++||||+|++++++++|..||.+..... .....
T Consensus       154 ~~kl~Dfg~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~  228 (297)
T 3fxz_A          154 SVKLTDFGFCAQITPEQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLI  228 (297)
T ss_dssp             CEEECCCTTCEECCSTT----CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH
T ss_pred             CEEEeeCCCceecCCcc----cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence            57999999998764331    12234578999999999988889999999999999999999999996532111 00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....+         ..  ..+               ......+.+++.+||+.||++|||++|+++
T Consensus       229 ~~~~~~---------~~--~~~---------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          229 ATNGTP---------EL--QNP---------------EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHCSC---------CC--SCG---------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HhCCCC---------CC--CCc---------------cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            000000         00  000               011234678999999999999999999976

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.80  E-value=4.7e-21  Score=134.17  Aligned_cols=137  Identities=21%  Similarity=0.293  Sum_probs=83.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++........ ........++..|+|||.+.+..++.++||||||++++++++|..|+......   ....
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~  227 (295)
T 3ugc_A          152 RVKIGDFGLTKVLPQDKEF-FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRM  227 (295)
T ss_dssp             EEEECCCCSCC--------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHH
T ss_pred             eEEEccCcccccccCCcce-eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhh
Confidence            4799999999876543111 11122345677899999998888999999999999999999999988543211   0000


Q ss_pred             HHhcCc-h----hhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           82 VKNALP-E----QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        82 ~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      ...... .    .....+........+               ......+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          228 IGNDKQGQMIVFHLIELLKNNGRLPRP---------------DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HCTTCCTHHHHHHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hcCccccchhHHHHHHHHhccCcCCCC---------------cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            000000 0    000011000000000               02234577899999999999999999999999999876


Q ss_pred             H
Q 031224          157 L  157 (163)
Q Consensus       157 ~  157 (163)
                      +
T Consensus       293 l  293 (295)
T 3ugc_A          293 M  293 (295)
T ss_dssp             -
T ss_pred             c
Confidence            5

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.80  E-value=3e-20  Score=134.69  Aligned_cols=126  Identities=22%  Similarity=0.342  Sum_probs=87.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||++.+..++.++|||||||+++++++ |..||.+....  ....
T Consensus       229 ~~kL~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~~~~  304 (382)
T 3tt0_A          229 VMKIADFGLARDIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELFK  304 (382)
T ss_dssp             CEEECSCSCCCCSSCCCTT--CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH
T ss_pred             cEEEcccCccccccccccc--ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5899999999876432111  12223456888999999988889999999999999999999 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+....            ....+.               .....+.+|+.+||+.||++|||+.++++.|+.+.....
T Consensus       305 ~~~~~~------------~~~~~~---------------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          305 LLKEGH------------RMDKPS---------------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             HHHTTC------------CCCCCS---------------SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             HHHcCC------------CCCCCc---------------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            111100            000000               122346789999999999999999999999999876543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.80  E-value=1.4e-20  Score=136.23  Aligned_cols=124  Identities=25%  Similarity=0.382  Sum_probs=84.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++|||||||+++|+++ |..||.+....  ....
T Consensus       251 ~~kl~DfG~s~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~  326 (377)
T 3cbl_A          251 VLKISDFGMSREEADGVYA--ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTRE  326 (377)
T ss_dssp             CEEECCGGGCEECTTSEEE--CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHH
T ss_pred             cEEECcCCCceecCCCcee--ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5799999999865432111  11111235678999999887789999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....            ....+.               .+...+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       327 ~~~~~~------------~~~~~~---------------~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          327 FVEKGG------------RLPCPE---------------LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HHHTTC------------CCCCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHcCC------------CCCCCC---------------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            111100            000000               1223467899999999999999999999999998865

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.80  E-value=2.3e-20  Score=137.89  Aligned_cols=119  Identities=24%  Similarity=0.342  Sum_probs=83.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....       .....++..|+|||.+.+..++.++||||||++++|+++ |..||......  ....
T Consensus       327 ~~kl~DfG~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~  397 (450)
T 1k9a_A          327 VAKVSDFGLTKEASST-------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVP  397 (450)
T ss_dssp             CEEECCCTTCEECC-------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHH
T ss_pred             CEEEeeCCCccccccc-------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5799999999854321       112346788999999988889999999999999999998 99999654221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....            ...+               ..+...+.+|+.+||+.||++|||+.++++.|+.+.+.
T Consensus       398 ~i~~~~~------------~~~p---------------~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          398 RVEKGYK------------MDAP---------------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHTTCC------------CCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHcCCC------------CCCC---------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            1111100            0000               02234567899999999999999999999999998764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.80  E-value=1.5e-20  Score=139.38  Aligned_cols=137  Identities=18%  Similarity=0.180  Sum_probs=79.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     ......+||++|+|||++.+..++.++||||+||+++++++|+.||.+..... .+...
T Consensus       202 ~~kl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i  275 (464)
T 3ttj_A          202 TLKILDFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKV  275 (464)
T ss_dssp             CEEECCCCCC-----C-----CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred             CEEEEEEEeeeecCCC-----cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence            5899999999876432     12234578999999999998889999999999999999999999997642211 01111


Q ss_pred             HH---hcCc-------hhhhhhhccccccCCCCCCCchhhhh--------hhHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           82 VK---NALP-------EQISEVLDPLFVTGGEEGEGTAEEKL--------KQDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        82 ~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                      +.   ...+       ......+..    .. .......+..        ...........+.+|+.+||+.||++|||+
T Consensus       276 ~~~lg~p~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta  350 (464)
T 3ttj_A          276 IEQLGTPCPEFMKKLQPTVRNYVEN----RP-KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV  350 (464)
T ss_dssp             HHHHCSCCHHHHTTSCHHHHHHHTT----SC-CCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHhcCCCCHHHHHHcchhhhhHhhc----cc-ccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCH
Confidence            00   0000       011111110    00 0000000000        001111224567899999999999999999


Q ss_pred             HHHHHH
Q 031224          144 SDVVNN  149 (163)
Q Consensus       144 ~~v~~~  149 (163)
                      +|+++.
T Consensus       351 ~e~L~H  356 (464)
T 3ttj_A          351 DDALQH  356 (464)
T ss_dssp             HHHHTS
T ss_pred             HHHhcC
Confidence            999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.79  E-value=2.5e-20  Score=142.38  Aligned_cols=129  Identities=19%  Similarity=0.283  Sum_probs=86.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+........ ......+++.|+|||++.+..++.++|||||||+++|+++ |+.||.+....  ....
T Consensus       474 ~vkL~DFGla~~~~~~~~~~~-~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~  550 (613)
T 2ozo_A          474 YAKISDFGLSKALGADDSYYT-ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMA  550 (613)
T ss_dssp             EEEECCCSTTTTCC---------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHH
T ss_pred             cEEEeeccCcccccCCCceee-eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHH
Confidence            589999999987643321111 1122345678999999987889999999999999999998 99999754221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHhc
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRC  160 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~~  160 (163)
                      .+.....          .  ..+               ..+...+.+|+.+||+.||++|||+.+|++.|+.+..+....
T Consensus       551 ~i~~~~~----------~--~~p---------------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~  603 (613)
T 2ozo_A          551 FIEQGKR----------M--ECP---------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  603 (613)
T ss_dssp             HHHTTCC----------C--CCC---------------TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred             HHHcCCC----------C--CCC---------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence            1111100          0  000               022345778999999999999999999999999998876543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.79  E-value=2.8e-20  Score=130.35  Aligned_cols=127  Identities=25%  Similarity=0.340  Sum_probs=85.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.................++..|+|||.+.+..++.++|+||+|++++++++ +..||......  ....
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~  243 (298)
T 3f66_A          166 TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITV  243 (298)
T ss_dssp             CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHH
T ss_pred             CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHH
Confidence            58999999998765432222222334457788999999888788999999999999999999 55566443211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ........        .    .+.               .....+.+++.+||+.||.+|||+.++++.|+++.+++
T Consensus       244 ~~~~~~~~--------~----~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          244 YLLQGRRL--------L----QPE---------------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             HHHTTCCC--------C----CCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             HHhcCCCC--------C----CCc---------------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            11111000        0    000               11234678999999999999999999999999998754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.79  E-value=3.1e-20  Score=133.40  Aligned_cols=63  Identities=24%  Similarity=0.320  Sum_probs=53.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....       .....|++.|+|||++.+..++.++||||+||+++++++|+.||...
T Consensus       200 ~~kl~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          200 GIKLIDFGCATFKSDY-------HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             CEEECCCTTCEETTSC-------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CEEEEeccCceecCCC-------CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence            4799999999865321       12356899999999998888999999999999999999999999653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.79  E-value=3.1e-20  Score=131.95  Aligned_cols=126  Identities=21%  Similarity=0.337  Sum_probs=84.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........++..|+|||++.+..++.++||||||++++++++ |..||.+....  ....
T Consensus       189 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~  265 (325)
T 3kul_A          189 VCKVSDFGLSRVLEDDPDA-AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVIS  265 (325)
T ss_dssp             CEEECCCSSCEECC----C-CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHH
T ss_pred             CEEECCCCcccccccCccc-eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHH
Confidence            5899999999876543111 111222345778999999987788999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+....            ....+               ......+.+++.+||+.||.+|||+.++++.|+.+.+..
T Consensus       266 ~~~~~~------------~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          266 SVEEGY------------RLPAP---------------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHTTC------------CCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHcCC------------CCCCC---------------CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            111000            00000               012344678999999999999999999999999987653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.79  E-value=1.1e-20  Score=136.41  Aligned_cols=124  Identities=23%  Similarity=0.351  Sum_probs=85.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+.....  ........|++.|+|||++.+..++.++|||||||+++++++ |..||......  ....
T Consensus       222 ~~kL~DFG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~  297 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGY--YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLE  297 (367)
T ss_dssp             CEEECCCHHHHHHHHHSS--CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH
T ss_pred             eEEECCCccccccccccc--cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            489999999986532211  112233467889999999888889999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....            ...+               ......+.+|+.+||+.||.+|||+.++++.|..+...
T Consensus       298 ~i~~~~~------------~~~~---------------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          298 FVTSGGR------------MDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             HHHTTCC------------CCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHcCCC------------CCCC---------------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            1111000            0000               01123467899999999999999999999999988654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.79  E-value=3.6e-20  Score=128.94  Aligned_cols=125  Identities=18%  Similarity=0.309  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......+++.|+|||.+.+..++.++|+||+|++++++++ |..||.+....  ....
T Consensus       154 ~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~  228 (281)
T 1mp8_A          154 CVKLGDFGLSRYMEDSTYY---KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIG  228 (281)
T ss_dssp             EEEECC----------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH
T ss_pred             CEEECccccccccCccccc---ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHH
Confidence            4799999999876432111   1122346778999999887788999999999999999996 99999653221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+....           .. ..+               ......+.+++.+||+.||++|||+.++++.|+++.++.-
T Consensus       229 ~i~~~~-----------~~-~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  279 (281)
T 1mp8_A          229 RIENGE-----------RL-PMP---------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  279 (281)
T ss_dssp             HHHTTC-----------CC-CCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHcCC-----------CC-CCC---------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence            111100           00 000               0123346789999999999999999999999999987653

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.79  E-value=6e-20  Score=129.38  Aligned_cols=126  Identities=24%  Similarity=0.332  Sum_probs=86.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|+|||.+.+..++.++|+||||++++++++ |..||....... ....
T Consensus       183 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~  259 (313)
T 1t46_A          183 ITKICDFGLARDIKNDSN--YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYK  259 (313)
T ss_dssp             EEEECCCGGGSCTTSCTT--SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HHHH
T ss_pred             CEEEcccccccccccccc--ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HHHH
Confidence            479999999987654311  111223456788999999887789999999999999999998 999986532111 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+...        ...    ..+.               .....+.+++.+||+.||.+|||+.++++.|+++.++.
T Consensus       260 ~~~~~--------~~~----~~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          260 MIKEG--------FRM----LSPE---------------HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             HHHHT--------CCC----CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HhccC--------CCC----CCcc---------------cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence            11110        000    0000               11234678999999999999999999999999988764

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.79  E-value=3e-20  Score=133.38  Aligned_cols=142  Identities=19%  Similarity=0.248  Sum_probs=83.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......     ......|+..|+|||++.+.. ++.++|||||||+++++++|+.||.+..... .+..
T Consensus       170 ~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~  243 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSE-----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHE  243 (360)
T ss_dssp             EEEECCCTTCBCCCTTS-----CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             cEEEeeCCCceecCCCC-----CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHH
Confidence            58999999998764321     122346899999999986655 8999999999999999999999997642211 1111


Q ss_pred             HHHh--cCchhhhhhhcccccc-CCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKN--ALPEQISEVLDPLFVT-GGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....  ..+......+++.... ........................+.+|+.+||+.||.+|||+.|+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            1110  0111111111110000 0000000000000000111234567889999999999999999999863

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.79  E-value=2.8e-20  Score=131.07  Aligned_cols=144  Identities=16%  Similarity=0.151  Sum_probs=77.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCc-chH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL-DLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~-~~~   79 (163)
                      .+||+|||+++......    .......|+..|+|||.+.+ ..++.++|+||+|++++++++|..||.+...... ...
T Consensus       140 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  215 (311)
T 4agu_A          140 VIKLCDFGFARLLTGPS----DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI  215 (311)
T ss_dssp             CEEECCCTTCEECC----------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CEEEeeCCCchhccCcc----cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            47999999998764321    11223468999999998876 4588999999999999999999999976432111 000


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..............+..............................+.+|+.+||+.||++|||++|+++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          216 RKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             HHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             HHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0011111111111111000000000000000000000111233456789999999999999999999853

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=3.7e-20  Score=129.24  Aligned_cols=129  Identities=19%  Similarity=0.276  Sum_probs=89.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........++..|+|||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       148 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~  224 (287)
T 1u59_A          148 YAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMA  224 (287)
T ss_dssp             EEEECCCTTCEECTTCSCE-ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHH
T ss_pred             CEEECcccceeeeccCcce-eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHH
Confidence            4799999999876433111 111222346788999999877778999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHhc
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRC  160 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~~  160 (163)
                      .+....        ....    +               ......+.+++.+||+.||.+|||+.++++.|.++..+....
T Consensus       225 ~i~~~~--------~~~~----~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~  277 (287)
T 1u59_A          225 FIEQGK--------RMEC----P---------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  277 (287)
T ss_dssp             HHHTTC--------CCCC----C---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHhcCC--------cCCC----C---------------CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence            111100        0000    0               012334678999999999999999999999999999887654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.79  E-value=1.4e-20  Score=130.18  Aligned_cols=118  Identities=24%  Similarity=0.318  Sum_probs=76.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......      .....|+..|+|||.+.+..++.++|+||+|++++++++|+.||.+.....  ....
T Consensus       154 ~~kl~Dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~  225 (271)
T 3dtc_A          154 ILKITDFGLAREWHRTT------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--VAYG  225 (271)
T ss_dssp             CEEECCCCC-------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHH
T ss_pred             ceEEccCCccccccccc------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHh
Confidence            37999999998654321      113468999999999887788999999999999999999999996532111  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .           .........+.               .....+.+++.+||+.||.+|||+.++++.|+++
T Consensus       226 ~-----------~~~~~~~~~~~---------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          226 V-----------AMNKLALPIPS---------------TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             H-----------HTSCCCCCCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             h-----------hcCCCCCCCCc---------------ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            0           00000000000               1223467899999999999999999999999754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.79  E-value=3.3e-20  Score=131.00  Aligned_cols=138  Identities=20%  Similarity=0.201  Sum_probs=81.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+ ..++.++|+||+||+++++++|+.||.+..... .+..
T Consensus       157 ~~kl~Dfg~a~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~  231 (311)
T 3niz_A          157 ALKLADFGLARAFGIP----VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPK  231 (311)
T ss_dssp             CEEECCCTTCEETTSC----CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHH
T ss_pred             CEEEccCcCceecCCC----cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHH
Confidence            4799999999876432    112223468999999999876 458899999999999999999999997643322 1111


Q ss_pred             HHH---hcCchhhhhhhccc--cccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVK---NALPEQISEVLDPL--FVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...   ...+..+....+-.  .............    ..........+.+|+.+||+.||++|||++|+++
T Consensus       232 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          232 IFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPW----SSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCH----HHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHCCCChHHhhhhhccchhhhcccccccCCcH----HHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            111   11111111100000  0000000000000    0011122345678999999999999999999986

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.79  E-value=3.3e-20  Score=131.90  Aligned_cols=124  Identities=18%  Similarity=0.287  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++||||||++++++++ |..||.+....  ....
T Consensus       155 ~~kL~DfG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~  230 (327)
T 3lzb_A          155 HVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS  230 (327)
T ss_dssp             EEEECCTTC------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH
T ss_pred             CEEEccCcceeEccCcccc--ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHH
Confidence            4799999999876433111  11223346778999999988889999999999999999999 99999654221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....            ...+.               .....+..++.+||+.||.+|||+.++++.|+.+...
T Consensus       231 ~~~~~~~------------~~~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          231 ILEKGER------------LPQPP---------------ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHTTCC------------CCCCT---------------TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHcCCC------------CCCCc---------------cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            1111100            00000               1123467899999999999999999999999998743

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.79  E-value=3.4e-20  Score=130.59  Aligned_cols=137  Identities=19%  Similarity=0.167  Sum_probs=82.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     .......||+.|+|||++.+..++.++||||+||+++++++|+.||.+..... .+...
T Consensus       158 ~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i  231 (308)
T 3g33_A          158 TVKLADFGLARIYSYQ-----MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKI  231 (308)
T ss_dssp             CEEECSCSCTTTSTTC-----CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHH
T ss_pred             CEEEeeCccccccCCC-----cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence            4799999999876432     12234578999999999988889999999999999999999999996542211 11111


Q ss_pred             HHh--cCc-hhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKN--ALP-EQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...  ..+ ..+..... ..........    ..............+.+|+.+||+.||++|||+.|+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          232 FDLIGLPPEDDWPRDVS-LPRGAFPPRG----PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             HHHHCCCCTTTSCSSCS-SCGGGSCCCC----CCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhCCCChhhccchhh-ccccccCCCC----CCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            100  000 00000000 0000000000    000011111223456789999999999999999999863

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.79  E-value=5.3e-20  Score=129.80  Aligned_cols=127  Identities=20%  Similarity=0.305  Sum_probs=87.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........|+..|+|||++.+..++.++|+||+|++++++++ |..||.+..... ....
T Consensus       186 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~  262 (316)
T 2xir_A          186 VVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR  262 (316)
T ss_dssp             CEEECCCGGGSCTTTCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHHH
T ss_pred             CEEECCCccccccccCcc--ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH-HHHH
Confidence            479999999987643211  111223457888999999888889999999999999999998 999996532211 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+.....        .    ..+.               .....+.+++.+||+.||.+|||+.++++.|+++.++..
T Consensus       263 ~~~~~~~--------~----~~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  313 (316)
T 2xir_A          263 RLKEGTR--------M----RAPD---------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA  313 (316)
T ss_dssp             HHHHTCC--------C----CCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HhccCcc--------C----CCCC---------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            1111000        0    0000               112346788999999999999999999999999987654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.79  E-value=6.9e-20  Score=133.56  Aligned_cols=119  Identities=17%  Similarity=0.201  Sum_probs=76.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCc--chH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL--DLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~--~~~   79 (163)
                      .+||+|||+++.....     ......+||+.|+|||++.+..++.++|||||||+++++++|..||.+......  ...
T Consensus       202 ~~kl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~  276 (400)
T 1nxk_A          202 ILKLTDFGFAKETTSH-----NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK  276 (400)
T ss_dssp             CEEECCCTTCEECC----------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH
T ss_pred             cEEEEecccccccCCC-----CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH
Confidence            4899999999865432     112345789999999999888899999999999999999999999976432211  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+...           ........             .......+.+|+.+||+.||++|||+.++++.
T Consensus       277 ~~i~~~-----------~~~~~~~~-------------~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          277 TRIRMG-----------QYEFPNPE-------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHHHHT-----------CCCCCTTT-------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHcC-----------cccCCCcc-------------cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            111100           00000000             00112346789999999999999999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.79  E-value=8.5e-20  Score=129.57  Aligned_cols=124  Identities=16%  Similarity=0.279  Sum_probs=83.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......|+..|+|||.+.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       153 ~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~  228 (325)
T 3kex_A          153 QVQVADFGVADLLPPDDKQ--LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPD  228 (325)
T ss_dssp             CEEECSCSGGGGSCCCTTC--CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHH
T ss_pred             eEEECCCCcccccCccccc--ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHH
Confidence            4799999999876543211  11233457788999999987889999999999999999999 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+......            ..+.               .....+..++.+||+.||.+|||+.++++.|..+...
T Consensus       229 ~~~~~~~~------------~~~~---------------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          229 LLEKGERL------------AQPQ---------------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             HHHTTCBC------------CCCT---------------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             HHHcCCCC------------CCCC---------------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            11111000            0000               0112256788999999999999999999999887643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.78  E-value=1.7e-20  Score=136.38  Aligned_cols=119  Identities=23%  Similarity=0.371  Sum_probs=76.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----------CCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----------SRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----------~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.+......  ......+||+.|+|||++.+           ..++.++|||||||+++++++|+.||..
T Consensus       192 ~~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~  269 (390)
T 2zmd_A          192 MLKLIDFGIANQMQPDTTS--VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  269 (390)
T ss_dssp             CEEECCCSSSCCC-----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eEEEEecCccccccCCCcc--ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence            4799999999876433111  11233579999999998754           3588899999999999999999999965


Q ss_pred             ccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           71 IFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .....    .        .+...+++......+.               .....+.+|+.+||+.||.+|||+.++++.
T Consensus       270 ~~~~~----~--------~~~~~~~~~~~~~~~~---------------~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          270 IINQI----S--------KLHAIIDPNHEIEFPD---------------IPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             CCCHH----H--------HHHHHHCTTSCCCCCC---------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhHHH----H--------HHHHHhCccccCCCCc---------------cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            32110    0        1111111111111110               002346789999999999999999999753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.78  E-value=2.2e-20  Score=143.09  Aligned_cols=127  Identities=19%  Similarity=0.286  Sum_probs=85.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+...... ........++..|+|||++.+..++.++|||||||+++|+++ |+.||.+....  ....
T Consensus       507 ~~kL~DFGla~~~~~~~~~-~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~  583 (635)
T 4fl3_A          507 YAKISDFGLSKALRADENY-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTA  583 (635)
T ss_dssp             EEEECCTTHHHHTTC--------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH
T ss_pred             CEEEEEcCCccccccCccc-cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5799999999876543211 111223346788999999988889999999999999999998 99999653221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+.....            ...+               ..+...+.+|+.+||+.||++|||+.+|++.|+++...+.
T Consensus       584 ~i~~~~~------------~~~p---------------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~  634 (635)
T 4fl3_A          584 MLEKGER------------MGCP---------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  634 (635)
T ss_dssp             HHHTTCC------------CCCC---------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred             HHHcCCC------------CCCC---------------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence            1111100            0000               0223457789999999999999999999999999887764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.78  E-value=3.9e-20  Score=129.40  Aligned_cols=140  Identities=19%  Similarity=0.112  Sum_probs=79.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+.. ++.++|+||+||+++++++|..|+.........+..
T Consensus       139 ~~kl~Dfg~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~  214 (292)
T 3o0g_A          139 ELKLANFGLARAFGIP----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_dssp             CEEECCCTTCEECCSC----CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH
T ss_pred             CEEEeecccceecCCc----cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHH
Confidence            5799999999876432    11223346899999999987766 799999999999999999988876432211111111


Q ss_pred             HHHhc---CchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNA---LPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....   ....+... ............  ................+.+|+.+||+.||++|||++|+++
T Consensus       215 i~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          215 IFRLLGTPTEEQWPSM-TKLPDYKPYPMY--PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHCCCCTTTCTTG-GGSTTCCCCCCC--CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhCCCChhhhhhh-cccccccccccc--cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            11100   00010000 000000000000  0000000000112344678999999999999999999986

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.78  E-value=7.4e-20  Score=130.09  Aligned_cols=127  Identities=27%  Similarity=0.351  Sum_probs=86.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|+|||.+.+..++.++||||||++++++++ |..||.+..... ....
T Consensus       202 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~  278 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSN--YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYK  278 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTT--SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHH
T ss_pred             eEEECccccccccccccc--eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHH
Confidence            479999999986543211  111223456788999999887788999999999999999998 899986532111 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      ......            ....+.               .....+.+++.+||+.||.+|||+.++++.|+.+..+..
T Consensus       279 ~~~~~~------------~~~~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  329 (333)
T 2i1m_A          279 LVKDGY------------QMAQPA---------------FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR  329 (333)
T ss_dssp             HHHHTC------------CCCCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHhcCC------------CCCCCC---------------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence            111100            000000               112346789999999999999999999999999887654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.78  E-value=8.5e-20  Score=134.63  Aligned_cols=118  Identities=19%  Similarity=0.256  Sum_probs=80.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|++.|+|||++.+..++.++||||+||+++++++|..||.+....  .....
T Consensus       151 ~vkL~DFG~a~~~~~~----~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~~  224 (444)
T 3soa_A          151 AVKLADFGLAIEVEGE----QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQ  224 (444)
T ss_dssp             CEEECCCSSCBCCCTT----CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHH
T ss_pred             cEEEccCceeEEecCC----CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHHH
Confidence            4799999999876432    11223457999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...           ......+..             ......+.+|+.+||+.||++|||+.|+++.
T Consensus       225 i~~~-----------~~~~~~~~~-------------~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          225 IKAG-----------AYDFPSPEW-------------DTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             HHHT-----------CCCCCTTTT-------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHhC-----------CCCCCcccc-------------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            1110           000000000             0112346789999999999999999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.78  E-value=1.2e-19  Score=131.59  Aligned_cols=140  Identities=17%  Similarity=0.155  Sum_probs=84.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchH--
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH--   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~--   79 (163)
                      .+||+|||+++.....       .....||..|+|||++.+..++.++|||||||+++++++|+.||...........  
T Consensus       234 ~~kl~DfG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~  306 (397)
T 1wak_A          234 KVKIADLGNACWVHKH-------FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDED  306 (397)
T ss_dssp             CEEECCGGGCEETTBC-------SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHH
T ss_pred             ceEecccccccccccc-------CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHH
Confidence            5899999999876432       2234689999999999888899999999999999999999999976433221100  


Q ss_pred             --HHH---HhcCchhhh--hhhc-cccccCC-----CCC-CCchhhhhh--hHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           80 --NFV---KNALPEQIS--EVLD-PLFVTGG-----EEG-EGTAEEKLK--QDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        80 --~~~---~~~~~~~~~--~~~~-~~~~~~~-----~~~-~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                        ..+   ....+....  .... ..+....     ... .......+.  ..........+.+|+.+||+.||++|||+
T Consensus       307 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  386 (397)
T 1wak_A          307 HIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATA  386 (397)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCH
T ss_pred             HHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCH
Confidence              000   011111000  0000 0000000     000 000000000  01123456678899999999999999999


Q ss_pred             HHHHH
Q 031224          144 SDVVN  148 (163)
Q Consensus       144 ~~v~~  148 (163)
                      .|+++
T Consensus       387 ~e~l~  391 (397)
T 1wak_A          387 AECLR  391 (397)
T ss_dssp             HHHHT
T ss_pred             HHHhh
Confidence            99986

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.78  E-value=6.3e-20  Score=129.28  Aligned_cols=127  Identities=21%  Similarity=0.287  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......    .......|+..|+|||.+.+..++.++|+||||++++++++|..||.+...........
T Consensus       174 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  249 (310)
T 2wqm_A          174 VVKLGDLGLGRFFSSKT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK  249 (310)
T ss_dssp             CEEECCC----------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHH
T ss_pred             CEEEEeccceeeecCCC----ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHH
Confidence            47999999998764321    11123468899999999988889999999999999999999999996532111111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      +...   .    ..+....                   .....+.+++.+||+.||++|||+.++++.|+.+....-
T Consensus       250 ~~~~---~----~~~~~~~-------------------~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~  300 (310)
T 2wqm_A          250 IEQC---D----YPPLPSD-------------------HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA  300 (310)
T ss_dssp             HHTT---C----SCCCCTT-------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             hhcc---c----CCCCccc-------------------ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence            1000   0    0000000                   112346789999999999999999999999999987653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.78  E-value=1e-19  Score=132.42  Aligned_cols=139  Identities=15%  Similarity=0.146  Sum_probs=83.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......     ......|++.|+|||++.+. .++.++||||+||+++++++|+.||.+..... .+..
T Consensus       180 ~~kL~DFG~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~  253 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAGE-----PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVE  253 (394)
T ss_dssp             EEEECCCTTCEECCTTC-----CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             cEEEeeCCCcccccCCC-----CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            47999999998764321     12235689999999998765 48999999999999999999999997643211 1111


Q ss_pred             HHHh---cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKN---ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+..   .....+............+..........   ........+.+|+.+||+.||.+|||+.|+++.
T Consensus       254 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          254 IIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKV---FRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHH---SCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHh---ccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            1111   11111111111111111111110000000   011123457889999999999999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.78  E-value=8.4e-20  Score=134.19  Aligned_cols=62  Identities=26%  Similarity=0.285  Sum_probs=52.7

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      +||+|||+++.....       .....|++.|+|||++.+..++.++|||||||+++++++|..||.+.
T Consensus       241 vkL~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          241 IKVIDFGSSCYEHQR-------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             EEECCCTTCEETTCC-------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eEEeecccceecCCc-------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            899999999765321       22356899999999998888999999999999999999999999764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=4.7e-20  Score=131.64  Aligned_cols=127  Identities=24%  Similarity=0.294  Sum_probs=85.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........|+..|+|||.+.+..++.++||||||++++++++ |..||.+..... ....
T Consensus       210 ~~kL~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~  286 (344)
T 1rjb_A          210 VVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-NFYK  286 (344)
T ss_dssp             EEEECCCGGGSCGGGCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH
T ss_pred             cEEeCCCccCcccccCcc--ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH-HHHH
Confidence            479999999987643211  111223456788999999887789999999999999999998 999996542211 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+...            .....+.               .....+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus       287 ~~~~~------------~~~~~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  337 (344)
T 1rjb_A          287 LIQNG------------FKMDQPF---------------YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE  337 (344)
T ss_dssp             HHHTT------------CCCCCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             HHhcC------------CCCCCCC---------------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence            11110            0000000               112346789999999999999999999999998876543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.78  E-value=6.7e-20  Score=129.84  Aligned_cols=124  Identities=20%  Similarity=0.298  Sum_probs=79.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++|+|||||+++++++ |..||.+....  ....
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~  250 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYY--RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYN  250 (323)
T ss_dssp             CEEECCCCC-------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH
T ss_pred             CEEEeeccccccccccccc--cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHH
Confidence            5899999999876433111  11122346778999999888889999999999999999999 89999653221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+...           .......                .....+.+++.+||+.||.+|||+.++++.|+++...
T Consensus       251 ~~~~~-----------~~~~~~~----------------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          251 YLIGG-----------NRLKQPP----------------ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             HHHTT-----------CCCCCCT----------------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHhcC-----------CCCCCCC----------------ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            11110           0000000                1223467899999999999999999999999988754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.78  E-value=8.4e-20  Score=128.80  Aligned_cols=125  Identities=21%  Similarity=0.268  Sum_probs=81.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~  260 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYY--RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYD  260 (313)
T ss_dssp             CEEECSCSCC------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred             cEEEeecCcceeccccccc--CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHH
Confidence            5899999999876432111  11222346778999999988889999999999999999999 88888653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+.....        ...    +               ......+.+++.+||+.||.+|||+.++++.|+++.+++
T Consensus       261 ~~~~~~~--------~~~----~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          261 YLLHGHR--------LKQ----P---------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             HHHTTCC--------CCC----B---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHcCCC--------CCC----C---------------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            1111000        000    0               012234678999999999999999999999999998764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.78  E-value=5.7e-20  Score=129.53  Aligned_cols=124  Identities=24%  Similarity=0.337  Sum_probs=85.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++|+||+|++++++++ |..||.+....  ....
T Consensus       188 ~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~  263 (314)
T 2ivs_A          188 KMKISDFGLSRDVYEEDSY--VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE--RLFN  263 (314)
T ss_dssp             EEEECCCTTCEECTTTSCE--ECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred             CEEEccccccccccccccc--eeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            4799999999876432111  11223456788999999887778999999999999999999 99999653221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....        .    ..+               ......+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       264 ~~~~~~~--------~----~~~---------------~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          264 LLKTGHR--------M----ERP---------------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHTTCC--------C----CCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HhhcCCc--------C----CCC---------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            1111100        0    000               01233467899999999999999999999999988653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.78  E-value=2.9e-20  Score=132.22  Aligned_cols=144  Identities=17%  Similarity=0.172  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcch-H
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL-H   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~-~   79 (163)
                      .+||+|||+++.+....    .......|+..|+|||.+.+. .++.++|+||+||+++++++|+.||.......... .
T Consensus       162 ~~kl~Dfg~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  237 (331)
T 4aaa_A          162 VVKLCDFGFARTLAAPG----EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI  237 (331)
T ss_dssp             CEEECCCTTC----------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cEEEEeCCCceeecCCc----cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence            57999999998764321    112234689999999998765 58899999999999999999999996543211000 0


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..............+..............................+.+|+.+||+.||++|||+.|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          238 MMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             HHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0001111111111111100000000000000000011111234557889999999999999999999764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.78  E-value=1.1e-19  Score=126.31  Aligned_cols=126  Identities=19%  Similarity=0.276  Sum_probs=84.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......++..|+|||.+.+..++.++|+||||++++++++ |+.||......  ....
T Consensus       151 ~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~  225 (281)
T 3cc6_A          151 CVKLGDFGLSRYIEDEDYY---KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIG  225 (281)
T ss_dssp             EEEECCCCGGGCC------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHH
T ss_pred             cEEeCccCCCccccccccc---ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHH
Confidence            4799999999876432111   1122346778999999877788999999999999999998 99999643221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      .+.....            ...+.               .....+.+++.+||+.||++|||+.++++.|+.+.....+
T Consensus       226 ~~~~~~~------------~~~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~  277 (281)
T 3cc6_A          226 VLEKGDR------------LPKPD---------------LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD  277 (281)
T ss_dssp             HHHHTCC------------CCCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCC------------CCCCC---------------CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence            1111000            00000               1123467899999999999999999999999998876543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.78  E-value=3.5e-20  Score=128.18  Aligned_cols=123  Identities=28%  Similarity=0.421  Sum_probs=84.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......++..|+|||.+.+..++.++|+||+|++++++++ |..||......  ....
T Consensus       144 ~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~  218 (269)
T 4hcu_A          144 VIKVSDFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVE  218 (269)
T ss_dssp             CEEECCTTGGGGBCCHHHH---STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH
T ss_pred             CEEeccccccccccccccc---cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHH
Confidence            4799999999876433111   1122346778999999887789999999999999999999 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....        ..    ..+.               .....+.+++.+||+.||.+|||+.++++.|+++.++
T Consensus       219 ~~~~~~--------~~----~~~~---------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          219 DISTGF--------RL----YKPR---------------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HHHTTC--------CC----CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHhcCc--------cC----CCCC---------------cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            111000        00    0000               1123467899999999999999999999999998864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.78  E-value=1.3e-19  Score=131.20  Aligned_cols=63  Identities=24%  Similarity=0.271  Sum_probs=53.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....       .....|++.|+|||++.+..++.++|||||||+++++++|+.||.+.
T Consensus       199 ~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          199 AIKIVDFGSSCQLGQR-------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             CEEECCCTTCEETTCC-------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cEEEEeccCceecccc-------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            4799999999876432       12356899999999998888999999999999999999999999754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.78  E-value=1.6e-20  Score=134.20  Aligned_cols=119  Identities=24%  Similarity=0.365  Sum_probs=74.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----------CCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----------SRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----------~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.+......  .......|++.|+|||++.+           ..++.++|||||||+++++++|+.||..
T Consensus       145 ~~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  222 (343)
T 3dbq_A          145 MLKLIDFGIANQMQPDTTS--VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  222 (343)
T ss_dssp             EEEECCCSSSCCC--------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cEEEeecccccccCccccc--ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence            4799999999876443111  11223568999999998753           5578899999999999999999999965


Q ss_pred             ccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           71 IFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .......            ....+++......+.               .....+.+|+.+||+.||.+|||+.++++.
T Consensus       223 ~~~~~~~------------~~~~~~~~~~~~~~~---------------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          223 IINQISK------------LHAIIDPNHEIEFPD---------------IPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CCSHHHH------------HHHHHCTTSCCCCCC---------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhHHHH------------HHHHhcCCcccCCcc---------------cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            3211101            111111111111110               011346789999999999999999999764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.78  E-value=1.7e-20  Score=133.13  Aligned_cols=141  Identities=21%  Similarity=0.246  Sum_probs=85.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++........ ........|+..|+|||.+.+..++.++||||+|++++++++|..||.............
T Consensus       165 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~  243 (327)
T 3lxl_A          165 HVKIADFGLAKLLPLDKDY-YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC  243 (327)
T ss_dssp             EEEECCGGGCEECCTTCSE-EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-
T ss_pred             CEEEcccccceecccCCcc-ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccc
Confidence            4799999999876433111 111223457888999999887778999999999999999999999986432110000000


Q ss_pred             HHhcCc--hhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           82 VKNALP--EQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        82 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                       ....+  ......+........+               ......+.+|+.+||+.||.+|||+.++++.|+.+......
T Consensus       244 -~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~  307 (327)
T 3lxl_A          244 -ERDVPALSRLLELLEEGQRLPAP---------------PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG  307 (327)
T ss_dssp             ----CCHHHHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred             -ccccccHHHHHHHhhcccCCCCC---------------CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence             00000  0111111111000000               02234577899999999999999999999999998776543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.78  E-value=2.9e-20  Score=137.49  Aligned_cols=123  Identities=22%  Similarity=0.349  Sum_probs=85.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......++..|+|||++....++.++||||||++++|+++ |+.||.+....  ....
T Consensus       322 ~~kl~DFG~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~  396 (454)
T 1qcf_A          322 VCKIADFGLARVIEDNEYT---AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIR  396 (454)
T ss_dssp             CEEECSTTGGGGBCCHHHH---TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH
T ss_pred             cEEEeeCCCceEcCCCcee---ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5899999999876432111   1122345778999999987889999999999999999999 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....            ....+               ..+...+.+|+.+||+.||++|||+++|++.|+.+...
T Consensus       397 ~i~~~~------------~~~~~---------------~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          397 ALERGY------------RMPRP---------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHHTC------------CCCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHcCC------------CCCCC---------------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            111100            00000               02234567899999999999999999999999987543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.77  E-value=1.4e-19  Score=132.64  Aligned_cols=137  Identities=18%  Similarity=0.178  Sum_probs=82.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+....     ......|++.|+|||++.+. .++.++|||||||+++|+++|+.||.+..... .+..
T Consensus       195 ~~kl~DFG~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~  268 (420)
T 1j1b_A          195 VLKLCDFGSAKQLVRGE-----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVE  268 (420)
T ss_dssp             EEEECCCTTCEECCTTC-----CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             eEEeccchhhhhcccCC-----CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            37999999998764321     12235689999999998765 58999999999999999999999997642211 1111


Q ss_pred             HHHh---cCchhhhhhhccccc-cCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKN---ALPEQISEVLDPLFV-TGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+..   ...+.+... ++... ...+......-..   .........+.+|+.+||+.||.+|||+.|+++
T Consensus       269 i~~~lg~p~~~~~~~~-~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          269 IIKVLGTPTREQIREM-NPNYTEFKFPQIKAHPWTK---VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHHHCSCCHHHHHHH-CSCCCCCCCCCCCCCCHHH---HSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhCCCCHHHHHhh-ChhhhhhccCccCCCCHHH---hcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            1111   111111111 11110 0011000000000   000112345788999999999999999999985

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.77  E-value=1.1e-19  Score=127.08  Aligned_cols=128  Identities=19%  Similarity=0.281  Sum_probs=86.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........++..|+|||.+.+..++.++|+||||++++++++ |+.||.+....  ....
T Consensus       155 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~  231 (291)
T 1xbb_A          155 YAKISDFGLSKALRADENY-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTA  231 (291)
T ss_dssp             EEEECCCTTCEECCTTCSE-EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH
T ss_pred             cEEEccCCcceeeccCCCc-ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            4799999999876433111 111122345688999999877778899999999999999999 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      .+....        ..    ..+               ......+.+++.+||+.||++|||+.++++.|+++..+...
T Consensus       232 ~~~~~~--------~~----~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~  283 (291)
T 1xbb_A          232 MLEKGE--------RM----GCP---------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN  283 (291)
T ss_dssp             HHHTTC--------CC----CCC---------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCC--------CC----CCC---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence            111100        00    000               01233467899999999999999999999999999887653

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.77  E-value=1.5e-19  Score=129.01  Aligned_cols=112  Identities=22%  Similarity=0.296  Sum_probs=77.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......     .....+|++.|+|||++.+..+ +.++||||+|++++++++|..||.+......  . 
T Consensus       146 ~~kl~DFG~s~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~-  217 (336)
T 3h4j_B          146 NVKIADFGLSNIMTDGN-----FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--F-  217 (336)
T ss_dssp             CEEECCSSCTBTTTTSB-----TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--B-
T ss_pred             CEEEEEeccceeccCCc-----ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--H-
Confidence            58999999998764421     1233568999999999987775 6789999999999999999999965321110  0 


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                                 ..+..... ..+.               .....+.+|+.+||+.||.+|||++|+++
T Consensus       218 -----------~~i~~~~~-~~p~---------------~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          218 -----------KKVNSCVY-VMPD---------------FLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             -----------CCCCSSCC-CCCT---------------TSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             -----------HHHHcCCC-CCcc---------------cCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                       00000000 0000               11234578999999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.77  E-value=1.4e-19  Score=133.16  Aligned_cols=122  Identities=19%  Similarity=0.279  Sum_probs=76.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-------CCCccccceehhhHHHHHHHh-CCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-------SRVSTYGDVYSYGILLLETFT-GKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-------~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~   73 (163)
                      .+||+|||+++.................||+.|+|||++.+       ..++.++|||||||+++++++ |..||.+...
T Consensus       166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~  245 (434)
T 2rio_A          166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS  245 (434)
T ss_dssp             EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred             EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence            58999999998875432221112234578999999998865       458899999999999999998 9999965321


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..   .........            ......          .........+.+++.+||+.||.+|||+.++++
T Consensus       246 ~~---~~i~~~~~~------------~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          246 RE---SNIIRGIFS------------LDEMKC----------LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HH---HHHHHTCCC------------CCCCTT----------CCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hH---HHHhcCCCC------------cccccc----------cccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            11   111111000            000000          001133456788999999999999999999986

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.77  E-value=6.6e-20  Score=130.39  Aligned_cols=139  Identities=21%  Similarity=0.198  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+.. ++.++||||+||+++++++|..||.+..... .+..
T Consensus       175 ~~kl~Dfg~a~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~  249 (329)
T 3gbz_A          175 VLKIGDFGLARAFGIP----IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFK  249 (329)
T ss_dssp             EEEECCTTHHHHHC---------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             eEEECcCCCccccCCc----ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHH
Confidence            3899999999876432    11123346799999999987754 8999999999999999999999996532211 1111


Q ss_pred             HHHh-cCch--hhhhhhc-cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKN-ALPE--QISEVLD-PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~-~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .... ..+.  .+..... +......+............   ......+.+|+.+||+.||.+|||++|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          250 IFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLG---ALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcc---cccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            1100 0000  0000000 00000011100001111111   112345678999999999999999999986

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.77  E-value=9.7e-20  Score=130.65  Aligned_cols=116  Identities=19%  Similarity=0.240  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......    .......||+.|+|||++.+..++.++||||+||+++++++|..||.+...   .....
T Consensus       171 ~vkl~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~  243 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESG----LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEG  243 (351)
T ss_dssp             CEEECCCTTCEECCTTS----CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HHHHH
T ss_pred             cEEEecCcceeEecCCC----eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HHHHH
Confidence            38999999998764421    112335689999999999888899999999999999999999999965311   11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +......     ..+                   .........+.+|+.+||+.||++|||+.++++
T Consensus       244 i~~~~~~-----~~~-------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          244 IIKGKYK-----MNP-------------------RQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHTCCC-----CCH-------------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHcCCCC-----CCc-------------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1000000     000                   000011234678999999999999999999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.77  E-value=5e-20  Score=131.34  Aligned_cols=127  Identities=23%  Similarity=0.343  Sum_probs=84.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|+|||.+.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       212 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~  287 (343)
T 1luf_A          212 VVKIADFGLSRNIYSADY--YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE--EVIY  287 (343)
T ss_dssp             CEEECCCSCHHHHTGGGC--BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH
T ss_pred             eEEEeecCCCcccccCcc--ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH--HHHH
Confidence            579999999987643211  111223457889999999887789999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      .+..           ..... .+.               .....+.+++.+||+.||++|||+.++++.|+++.+....
T Consensus       288 ~~~~-----------~~~~~-~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~  339 (343)
T 1luf_A          288 YVRD-----------GNILA-CPE---------------NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG  339 (343)
T ss_dssp             HHHT-----------TCCCC-CCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred             HHhC-----------CCcCC-CCC---------------CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence            1110           00000 000               1123467899999999999999999999999998876654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.77  E-value=2.9e-19  Score=127.75  Aligned_cols=63  Identities=29%  Similarity=0.368  Sum_probs=53.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....       .....|+..|+|||++.+..++.++|+||+||+++++++|..||...
T Consensus       180 ~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (355)
T 2eu9_A          180 SIRVADFGSATFDHEH-------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH  242 (355)
T ss_dssp             CEEECCCTTCEETTSC-------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cEEEeecCcccccccc-------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence            4799999999864321       12346899999999998888999999999999999999999999754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.77  E-value=2.1e-19  Score=127.62  Aligned_cols=123  Identities=20%  Similarity=0.234  Sum_probs=68.5

Q ss_pred             ceeecccccccccCccccCC--------CcccccccccccccCCCCC---CCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSN--------QSSSIGLKGTVGYAPPEYG---MGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~--------~~~~~~~~g~~~y~~pe~~---~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.........        ........|+..|+|||++   .+..++.++||||||++++++++|+.||.+
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            57999999998765431110        0111134588999999998   455688999999999999999999999964


Q ss_pred             ccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           71 IFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      ....     .......            ......               .....+.+|+.+||+.||.+|||+.++++.|
T Consensus       256 ~~~~-----~~~~~~~------------~~~~~~---------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          256 GAKL-----RIVNGKY------------SIPPHD---------------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             ---------------C------------CCCTTC---------------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             hhHH-----HhhcCcc------------cCCccc---------------ccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            3211     0000000            000000               0011256789999999999999999999999


Q ss_pred             HHhHHH
Q 031224          151 QKVKST  156 (163)
Q Consensus       151 ~~~~~~  156 (163)
                      ..+...
T Consensus       304 ~~~~~~  309 (337)
T 3ll6_A          304 QEIAAA  309 (337)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.77  E-value=1.5e-19  Score=130.08  Aligned_cols=116  Identities=16%  Similarity=0.211  Sum_probs=79.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+....     .....+||+.|+|||++.+..++.++|+||+|++++++++|..||.+....  .....
T Consensus       157 ~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--~~~~~  229 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGV-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLAN  229 (361)
T ss_dssp             CEEECCCSSCEECCTTC-----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHH
T ss_pred             CEEEEecCCceEcCCCC-----ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            58999999998764421     123356899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +......     +++.                   ........+.+|+.+||..||.+|||+.|+++
T Consensus       230 i~~~~~~-----~~~~-------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          230 ITAVSYD-----FDEE-------------------FFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHTTCCC-----CCHH-------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhcCCC-----CCch-------------------hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1110000     0000                   00011234678999999999999999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.77  E-value=1e-19  Score=129.25  Aligned_cols=117  Identities=20%  Similarity=0.223  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|++.|+|||++.+..++.++|+||+|++++++++|..||.+....  .....
T Consensus       156 ~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~  228 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLAN  228 (326)
T ss_dssp             CEEECCCTTCEECCTTS-----CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHH
T ss_pred             CEEEEECCCCeECCCCC-----ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHH
Confidence            58999999998764321     122346899999999998888999999999999999999999999653211  01111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +......     +..                   .........+.+|+.+||+.||++|||+.++++.
T Consensus       229 ~~~~~~~-----~~~-------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          229 VSAVNYE-----FED-------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHHTCCC-----CCH-------------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHhcCCC-----cCc-------------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1000000     000                   0000122346789999999999999999999873

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.77  E-value=1e-19  Score=131.58  Aligned_cols=125  Identities=23%  Similarity=0.383  Sum_probs=74.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........++..|+|||++.+..++.++||||||++++|+++ |..||......  ....
T Consensus       185 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~  261 (373)
T 2qol_A          185 VCKVSDFGLGRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIK  261 (373)
T ss_dssp             CEEECCC-----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHH
T ss_pred             CEEECcCccccccccCCcc-ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5799999999876443111 111112235678999999888889999999999999999997 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+..            ......+               ......+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       262 ~i~~------------~~~~~~~---------------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          262 AVDE------------GYRLPPP---------------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHT------------TEECCCC---------------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHc------------CCCCCCC---------------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            1110            0000000               01234467899999999999999999999999998764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.77  E-value=5.5e-20  Score=132.72  Aligned_cols=127  Identities=9%  Similarity=-0.003  Sum_probs=81.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC--CCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG--SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~--~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++.....       .....+++.|+|||++.+  ..++.++|||||||+++++++|+.||.+.........
T Consensus       232 ~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~  304 (371)
T 3q60_A          232 RLMLGDVSALWKVGTR-------GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSW  304 (371)
T ss_dssp             CEEECCGGGEEETTCE-------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCC
T ss_pred             CEEEEecceeeecCCC-------ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccch
Confidence            5899999999876432       112346699999999977  5689999999999999999999999976432211000


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH--HHHHhHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN--NLQKVKST  156 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~--~l~~~~~~  156 (163)
                      ..      ............  .+.             .......+.+|+.+||+.||++|||+.++++  .+.++.+.
T Consensus       305 ~~------~~~~~~~~~~~~--~~~-------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  362 (371)
T 3q60_A          305 KR------PSLRVPGTDSLA--FGS-------------CTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE  362 (371)
T ss_dssp             CB------CCTTSCCCCSCC--CTT-------------SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred             hh------hhhhhccccccc--hhh-------------ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence            00      000000000000  000             0011334678999999999999999999975  35544443

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.77  E-value=2.1e-19  Score=127.59  Aligned_cols=139  Identities=13%  Similarity=0.066  Sum_probs=81.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......     ......|+..|+|||.+.+ ..++.++||||+||+++++++|+.||.........+..
T Consensus       169 ~~kl~Dfg~a~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~  243 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHPGQ-----EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR  243 (330)
T ss_dssp             EEEECCCTTCEECCTTC-----CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred             EEEEEeCCCceEcCCCC-----ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHH
Confidence            57999999998764321     1223468899999999876 45889999999999999999999999543221111111


Q ss_pred             HHHhcCchhhhhhhccc-----------cccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPL-----------FVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .............++..           ..........   ..............+.+|+.+||+.||.+|||++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE---RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGG---GGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCchhhhHHHHhccccccchhhhhhhccccchh---hhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            11111111111111100           0000000000   00000000112345788999999999999999999986

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.77  E-value=1.7e-19  Score=125.50  Aligned_cols=123  Identities=26%  Similarity=0.434  Sum_probs=84.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......++..|+|||.+.+..++.++|+||+|++++++++ |+.||......  ....
T Consensus       158 ~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~  232 (283)
T 3gen_A          158 VVKVSDFGLSRYVLDDEYT---SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAE  232 (283)
T ss_dssp             CEEECSTTGGGGBCCHHHH---STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH
T ss_pred             CEEEccccccccccccccc---cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHH
Confidence            5799999999876433111   1122345778999999887789999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....        ..    ..+.               .....+.+++.+||+.||.+|||+.++++.|.++.++
T Consensus       233 ~~~~~~--------~~----~~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          233 HIAQGL--------RL----YRPH---------------LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             HHHTTC--------CC----CCCT---------------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhccc--------CC----CCCC---------------cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            111100        00    0000               1123467899999999999999999999999998764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.77  E-value=2.4e-20  Score=130.91  Aligned_cols=134  Identities=19%  Similarity=0.237  Sum_probs=85.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++........ ........|+..|+|||.+.+..++.++|+||+|++++++++|..|+......   ....
T Consensus       164 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~  239 (302)
T 4e5w_A          164 QVKIGDFGLTKAIETDKEY-YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKM  239 (302)
T ss_dssp             EEEECCCTTCEECCTTCCE-EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHH
T ss_pred             CEEECcccccccccCCCcc-eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---Hhhc
Confidence            4799999999876543111 11122345788899999988878889999999999999999999886432110   0000


Q ss_pred             HHhcCch----hhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           82 VKNALPE----QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .......    .....+........+               ......+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          240 IGPTHGQMTVTRLVNTLKEGKRLPCP---------------PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HCSCCGGGHHHHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCcccccCHHHHHHHHhccCCCCCC---------------CCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            0000000    001111100000000               022345778999999999999999999999999875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.77  E-value=1.2e-19  Score=126.05  Aligned_cols=119  Identities=25%  Similarity=0.340  Sum_probs=78.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....       .....++..|+|||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       155 ~~~l~Dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~  225 (278)
T 1byg_A          155 VAKVSDFGLTKEASST-------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVP  225 (278)
T ss_dssp             CEEECCCCC-------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHH
T ss_pred             cEEEeecccccccccc-------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            4799999998765321       112346788999999887788999999999999999998 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....        ..    ..+               ......+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       226 ~~~~~~--------~~----~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          226 RVEKGY--------KM----DAP---------------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHTTTC--------CC----CCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhcCC--------CC----CCc---------------ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            110000        00    000               01123467899999999999999999999999998765

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.77  E-value=1.3e-19  Score=130.46  Aligned_cols=117  Identities=19%  Similarity=0.247  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|++.|+|||++.+..++.++|+||+||+++++++|..||.+....  .....
T Consensus       169 ~~kl~DfG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~  241 (362)
T 2bdw_A          169 AVKLADFGLAIEVNDSE-----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQ  241 (362)
T ss_dssp             CEEECCCTTCBCCTTCC-----SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEeecCcceEecCCc-----ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHH
Confidence            48999999998764321     122357899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +....           ......             ........+.+|+.+||+.||++|||+.++++.
T Consensus       242 i~~~~-----------~~~~~~-------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          242 IKAGA-----------YDYPSP-------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHTC-----------CCCCTT-------------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHhCC-----------CCCCcc-------------cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            11100           000000             000112346789999999999999999998754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.77  E-value=1.9e-19  Score=125.54  Aligned_cols=125  Identities=21%  Similarity=0.333  Sum_probs=86.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......   ........++..|+|||.+.+..++.++|+||+|++++++++ |..||......  ....
T Consensus       149 ~~~l~Dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~  223 (288)
T 3kfa_A          149 LVKVADFGLSRLMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYE  223 (288)
T ss_dssp             CEEECCCCGGGTSCSSS---SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred             CEEEccCccceeccCCc---cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            47999999998764321   111222346778999999887888999999999999999999 99998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+....            ....+.               .....+.+++.+||+.||.+|||+.++++.|+.+..+..
T Consensus       224 ~~~~~~------------~~~~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~  274 (288)
T 3kfa_A          224 LLEKDY------------RMERPE---------------GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS  274 (288)
T ss_dssp             HHHTTC------------CCCCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHhccC------------CCCCCC---------------CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            111100            000000               112346789999999999999999999999999887643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.77  E-value=5.9e-20  Score=133.70  Aligned_cols=146  Identities=11%  Similarity=0.084  Sum_probs=87.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC--------CCCccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG--------SRVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~--------~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+|||+++......     ......|+..|+|||++..        ..++.++|+|||||+++++++|+.||.....
T Consensus       154 ~~kL~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~  228 (396)
T 4eut_A          154 VYKLTDFGAARELEDDE-----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG  228 (396)
T ss_dssp             EEEECCGGGCEECCCGG-----GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred             eEEEecCCCceEccCCC-----ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence            37999999998764432     1123468999999998754        3577889999999999999999999975432


Q ss_pred             cCcc--hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           74 EGLD--LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        74 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ....  ....+....+......+...............   ............+.+++.+||+.||++|||+.++++.+.
T Consensus       229 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~  305 (396)
T 4eut_A          229 PRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMP---VSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (396)
T ss_dssp             TTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCC---TTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             ccchHHHHHHHhcCCCcccchhheeccCCCcccCccCC---cccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence            2111  11111111111000000000000000000000   000112345566778999999999999999999999998


Q ss_pred             HhHH
Q 031224          152 KVKS  155 (163)
Q Consensus       152 ~~~~  155 (163)
                      .+.+
T Consensus       306 ~il~  309 (396)
T 4eut_A          306 DILH  309 (396)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            7764

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.77  E-value=3.7e-19  Score=126.40  Aligned_cols=141  Identities=16%  Similarity=0.200  Sum_probs=83.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC-cchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~~~~   80 (163)
                      .+||+|||+++.....       .....|+..|+|||++.+..++.++|+||+||+++++++|..||....... .....
T Consensus       175 ~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  247 (339)
T 1z57_A          175 DIKVVDFGSATYDDEH-------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME  247 (339)
T ss_dssp             CEEECCCSSCEETTSC-------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHH
T ss_pred             CceEeeCcccccCccc-------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            4799999999865321       123468999999999988889999999999999999999999997543211 01111


Q ss_pred             HHHhcCchhhhhhhc-cccccCC-CCCCC-chhhhhh----------hHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHH
Q 031224           81 FVKNALPEQISEVLD-PLFVTGG-EEGEG-TAEEKLK----------QDQVQESLATILKIGVACSVESPRERMDISDVV  147 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~----------~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~  147 (163)
                      ......+........ ....... ..... .......          ..........+.+|+.+||+.||.+|||+.|++
T Consensus       248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell  327 (339)
T 1z57_A          248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL  327 (339)
T ss_dssp             HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence            111111111111000 0000000 00000 0000000          000113355678999999999999999999998


Q ss_pred             HH
Q 031224          148 NN  149 (163)
Q Consensus       148 ~~  149 (163)
                      +.
T Consensus       328 ~h  329 (339)
T 1z57_A          328 KH  329 (339)
T ss_dssp             TS
T ss_pred             cC
Confidence            54

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.77  E-value=3.3e-19  Score=126.41  Aligned_cols=117  Identities=20%  Similarity=0.292  Sum_probs=79.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......    .......|++.|+|||++.+..++.++|+||||++++++++|+.||......  .....
T Consensus       179 ~~kl~Dfg~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~  252 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDV----PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKR  252 (321)
T ss_dssp             CEEECCCTTCEECCSSS----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH
T ss_pred             cEEEeeeeeeeecccCc----cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            57999999998764321    1123356899999999998888999999999999999999999999653211  01111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...        ..+.+...                 ......+.+++.+||+.||++|||+.++++.
T Consensus       253 ~~~~--------~~~~~~~~-----------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          253 LRDS--------PPPKLKNS-----------------HKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHS--------SCCCCTTG-----------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HhcC--------CCCCcCcc-----------------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1000        00000000                 0112346778999999999999999999863

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.77  E-value=1.6e-19  Score=128.40  Aligned_cols=113  Identities=19%  Similarity=0.228  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCc-cccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVS-TYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~-~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....     ......+|++.|+|||++.+..+. .++||||+||+++++++|+.||.+....  ....
T Consensus       152 ~~kl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~  224 (328)
T 3fe3_A          152 NIKIADFGFSNEFTVG-----GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRE  224 (328)
T ss_dssp             CEEECSTTCCGGGSSS-----CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH
T ss_pred             CEEEeeccCceecCCC-----CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence            5899999999865432     122345799999999998877764 7899999999999999999999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.           .....  .+.               .....+.+|+.+||+.||.+|||++|+++.
T Consensus       225 ~i~-----------~~~~~--~p~---------------~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          225 RVL-----------RGKYR--IPF---------------YMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHH-----------HCCCC--CCT---------------TSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             HHH-----------hCCCC--CCC---------------CCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            110           00000  000               112335679999999999999999999753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.77  E-value=6.8e-19  Score=129.01  Aligned_cols=118  Identities=22%  Similarity=0.297  Sum_probs=74.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.....     ......+|++.|+|||++.+   ..++.++|+||+||+++++++|..||....... .+
T Consensus       280 ~~kl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~  353 (419)
T 3i6u_A          280 LIKITDFGHSKILGET-----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SL  353 (419)
T ss_dssp             CEEECCSSTTTSCC----------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CH
T ss_pred             eEEEeecccceecCCC-----ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HH
Confidence            4899999999876432     11223578999999999853   457889999999999999999999996532211 22


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...+..........                        ........+.+|+.+||+.||.+|||+.++++.
T Consensus       354 ~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          354 KDQITSGKYNFIPE------------------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             HHHHHTTCCCCCHH------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHhcCCCCCCch------------------------hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            22211111000000                        000123346789999999999999999999874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=5e-20  Score=132.88  Aligned_cols=131  Identities=18%  Similarity=0.214  Sum_probs=80.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....       .....++.+|+|||++.+ ..++.++|+||+||+++++++|+.||.+..... .+..
T Consensus       166 ~~kl~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~  237 (367)
T 1cm8_A          166 ELKILDFGLARQADSE-------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKE  237 (367)
T ss_dssp             CEEECCCTTCEECCSS-------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             CEEEEeeecccccccc-------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            5799999999875331       223568999999998876 568999999999999999999999997542211 0111


Q ss_pred             HHH--hcCchhh---------hhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVK--NALPEQI---------SEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...  ...+...         ...+... .....    ....    .........+.+|+.+||+.||++|||++++++.
T Consensus       238 i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~----~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          238 IMKVTGTPPAEFVQRLQSDEAKNYMKGL-PELEK----KDFA----SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHHCCCCHHHHHTCSCHHHHHHHHHS-CCCCC----CCGG----GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHhcCCCCHHHHHHhhhHHHHHHHHhC-CCCCC----CCHH----HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            100  0011111         0111000 00000    0000    0001223456789999999999999999999873

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.76  E-value=8.3e-20  Score=136.40  Aligned_cols=121  Identities=21%  Similarity=0.350  Sum_probs=83.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......++..|+|||++.+..++.++||||||++++|+++ |..||.+....  ....
T Consensus       356 ~~kl~DFG~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~  430 (495)
T 1opk_A          356 LVKVADFGLSRLMTGDTYT---AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYE  430 (495)
T ss_dssp             CEEECCTTCEECCTTCCEE---CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred             cEEEeecccceeccCCcee---ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5899999999876432111   1122345778999999887789999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .+....            ....+               ..+...+.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus       431 ~~~~~~------------~~~~~---------------~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          431 LLEKDY------------RMERP---------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHTTC------------CCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHcCC------------CCCCC---------------CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            111110            00000               022344678999999999999999999999998763

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.76  E-value=3.3e-20  Score=133.85  Aligned_cols=131  Identities=15%  Similarity=0.187  Sum_probs=71.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....       .....|+.+|+|||++.+ ..++.++||||+||+++++++|+.||.+..... .+..
T Consensus       170 ~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~  241 (367)
T 2fst_X          170 ELKILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKL  241 (367)
T ss_dssp             CEEECC----------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred             CEEEeecccccccccc-------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            5899999999865321       223568999999999876 568899999999999999999999997642211 0111


Q ss_pred             HHH--hcCch---------hhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVK--NALPE---------QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...  .....         .....+...     ........    ..........+.+|+.+||+.||++|||+.++++.
T Consensus       242 i~~~~g~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          242 ILRLVGTPGAELLKKISSESARNYIQSL-----TQMPKMNF----ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHHCSCCHHHHTTCCCHHHHHHHHTS-----CCCCCCCH----HHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHhCCCCHHHHHHhhhHHHHHHHhcc-----CCCCCCCH----HHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            100  00000         011111100     00000000    00011223456889999999999999999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=1.3e-19  Score=128.59  Aligned_cols=117  Identities=21%  Similarity=0.221  Sum_probs=80.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...     .......|++.|+|||++.+..++.++|+||+|++++++++|..||......  .....
T Consensus       142 ~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~  214 (321)
T 1tki_A          142 TIKIIEFGQARQLKPG-----DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIEN  214 (321)
T ss_dssp             CEEECCCTTCEECCTT-----CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHH
T ss_pred             CEEEEECCCCeECCCC-----CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--HHHHH
Confidence            5799999999876432     1123356899999999998877899999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +.......     +.                   .........+.+++.+||+.||.+|||+.|+++.
T Consensus       215 i~~~~~~~-----~~-------------------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          215 IMNAEYTF-----DE-------------------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHTCCCC-----CH-------------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHcCCCCC-----Ch-------------------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            11100000     00                   0000123346789999999999999999999873

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.76  E-value=3e-19  Score=128.66  Aligned_cols=140  Identities=19%  Similarity=0.214  Sum_probs=81.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCc-----
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL-----   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~-----   76 (163)
                      .+||+|||+++.....       .....|+..|+|||++.+..++.++|||||||+++++++|..||........     
T Consensus       176 ~~kl~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  248 (373)
T 1q8y_A          176 QIKIADLGNACWYDEH-------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD  248 (373)
T ss_dssp             EEEECCCTTCEETTBC-------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred             eEEEcccccccccCCC-------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence            4799999999876432       1234689999999999888899999999999999999999999975432110     


Q ss_pred             chHHHH--HhcCchhh-------hhhhccc-cccCCCCCCC-chhhhh--hhHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           77 DLHNFV--KNALPEQI-------SEVLDPL-FVTGGEEGEG-TAEEKL--KQDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        77 ~~~~~~--~~~~~~~~-------~~~~~~~-~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                      .+....  ....+...       ...++.. .......... ......  ...........+.+|+.+||+.||++|||+
T Consensus       249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  328 (373)
T 1q8y_A          249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA  328 (373)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred             HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence            000000  00111100       0000000 0000000000 000000  001223556678899999999999999999


Q ss_pred             HHHHH
Q 031224          144 SDVVN  148 (163)
Q Consensus       144 ~~v~~  148 (163)
                      +|+++
T Consensus       329 ~ell~  333 (373)
T 1q8y_A          329 GGLVN  333 (373)
T ss_dssp             HHHHT
T ss_pred             HHHhh
Confidence            99986

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=7.8e-20  Score=132.66  Aligned_cols=70  Identities=29%  Similarity=0.360  Sum_probs=51.9

Q ss_pred             ceeecccccccccCcccc-----------------CCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHh
Q 031224            2 TAHVGDFGLTRFIPEAIR-----------------SNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFT   63 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~-----------------~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~   63 (163)
                      .+||+|||+++.+.....                 .........+||++|+|||++.+ ..++.++||||+||+++++++
T Consensus       147 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~  226 (388)
T 3oz6_A          147 HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC  226 (388)
T ss_dssp             CEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh
Confidence            579999999987532100                 00112234579999999999876 468999999999999999999


Q ss_pred             CCCCCccc
Q 031224           64 GKRPTSDI   71 (163)
Q Consensus        64 g~~p~~~~   71 (163)
                      |+.||.+.
T Consensus       227 g~~pf~~~  234 (388)
T 3oz6_A          227 GKPIFPGS  234 (388)
T ss_dssp             SSCSCCCS
T ss_pred             CCCCCCCC
Confidence            99999764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.76  E-value=1e-19  Score=129.16  Aligned_cols=118  Identities=23%  Similarity=0.311  Sum_probs=78.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+.....  ........|++.|+|||++.+..+ +.++||||+||+++++++|..||............
T Consensus       143 ~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~  220 (323)
T 3tki_A          143 NLKISDFGLATVFRYNNR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD  220 (323)
T ss_dssp             CEEECCCTTCEECEETTE--ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH
T ss_pred             CEEEEEeeccceeccCCc--ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH
Confidence            479999999986543211  111223578999999999877765 77899999999999999999999654322111111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .......      ..+                     .......+.+|+.+||+.||.+|||+.|+++
T Consensus       221 ~~~~~~~------~~~---------------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          221 WKEKKTY------LNP---------------------WKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHTTCTT------STT---------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             Hhccccc------CCc---------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            1110000      000                     0011234578999999999999999999975

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.76  E-value=1.9e-19  Score=129.02  Aligned_cols=118  Identities=19%  Similarity=0.242  Sum_probs=71.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     .......|++.|+|||++.+..++.++|||||||+++++++|..||.+...........
T Consensus       189 ~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i  263 (349)
T 2w4o_A          189 PLKIADFGLSKIVEHQ-----VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRI  263 (349)
T ss_dssp             CEEECCCC---------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHH
T ss_pred             CEEEccCccccccCcc-----cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHH
Confidence            5799999999875432     11223568999999999988889999999999999999999999996532211011111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .            ........+.             .......+.+|+.+||+.||++|||+.++++.
T Consensus       264 ~------------~~~~~~~~~~-------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          264 L------------NCEYYFISPW-------------WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             H------------TTCCCCCTTT-------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             H------------hCCCccCCch-------------hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0            0000000000             00112346789999999999999999999863

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=3.3e-19  Score=127.26  Aligned_cols=122  Identities=16%  Similarity=0.146  Sum_probs=77.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC--CCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG--SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~--~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++.+...............|++.|+|||.+.+  ..++.++||||||++++++++|+.||.+.....    
T Consensus       208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----  283 (345)
T 3hko_A          208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD----  283 (345)
T ss_dssp             CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----
T ss_pred             eEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHH----
Confidence            58999999998653321111112234568999999999865  568899999999999999999999996532211    


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                       ...        ..+........+             ........+.+|+.+||+.||.+|||+.++++.
T Consensus       284 -~~~--------~~~~~~~~~~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h  331 (345)
T 3hko_A          284 -TIS--------QVLNKKLCFENP-------------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQH  331 (345)
T ss_dssp             -HHH--------HHHHCCCCTTSG-------------GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred             -HHH--------HHHhcccccCCc-------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence             100        011110000000             000112346789999999999999999999873

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.76  E-value=8e-20  Score=132.17  Aligned_cols=114  Identities=11%  Similarity=0.119  Sum_probs=78.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-----------CCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-----------RVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-----------~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++....       ......| ..|+|||++.+.           .++.++|||||||+++++++|+.||..
T Consensus       244 ~~kL~DFG~a~~~~~-------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~  315 (377)
T 3byv_A          244 GVFLTGFEHLVRDGA-------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITK  315 (377)
T ss_dssp             CEEECCGGGCEETTC-------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CEEEEechhheecCC-------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcc
Confidence            589999999986432       1223457 899999998776           789999999999999999999999965


Q ss_pred             ccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH--
Q 031224           71 IFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN--  148 (163)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~--  148 (163)
                      ......  .           ......     ..                .....+.+|+.+||+.||++|||+.++++  
T Consensus       316 ~~~~~~--~-----------~~~~~~-----~~----------------~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp  361 (377)
T 3byv_A          316 DAALGG--S-----------EWIFRS-----CK----------------NIPQPVRALLEGFLRYPKEDRLLPLQAMETP  361 (377)
T ss_dssp             ----CC--S-----------GGGGSS-----CC----------------CCCHHHHHHHHHHTCSSGGGCCCHHHHHTSH
T ss_pred             cccccc--h-----------hhhhhh-----cc----------------CCCHHHHHHHHHHcCCCchhCCCHHHHhhCh
Confidence            322110  0           000000     00                11234678999999999999999999986  


Q ss_pred             HHHHhHHHH
Q 031224          149 NLQKVKSTL  157 (163)
Q Consensus       149 ~l~~~~~~~  157 (163)
                      .+..+.+.+
T Consensus       362 ~f~~~~~~~  370 (377)
T 3byv_A          362 EYEQLRTEL  370 (377)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            466665544

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.76  E-value=3.4e-19  Score=125.77  Aligned_cols=110  Identities=21%  Similarity=0.271  Sum_probs=74.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     .......||+.|+|||++.+ .++.++|||||||+++++++|..++.....    ....
T Consensus       195 ~~kl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~  264 (311)
T 3p1a_A          195 RCKLGDFGLLVELGTA-----GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----WQQL  264 (311)
T ss_dssp             CEEECCCTTCEECC-----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHH
T ss_pred             CEEEccceeeeecccC-----CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHH
Confidence            5899999999876432     11223468999999998875 789999999999999999999766543210    1111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....+...                           .......+.+++.+||+.||++|||++++++
T Consensus       265 ~~~~~~~~~---------------------------~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          265 RQGYLPPEF---------------------------TAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             TTTCCCHHH---------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hccCCCccc---------------------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            000000000                           0112344678999999999999999999986

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=1.7e-19  Score=130.65  Aligned_cols=144  Identities=15%  Similarity=0.181  Sum_probs=85.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+....     ......|+..|+|||.+.+.. ++.++||||+||+++++++|+.||.+....+ .+..
T Consensus       180 ~~kl~Dfg~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~  253 (383)
T 3eb0_A          180 TLKLCDFGSAKKLIPSE-----PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSID-QLVR  253 (383)
T ss_dssp             EEEECCCTTCEECCTTS-----CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             cEEEEECCCCcccCCCC-----CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHH-HHHH
Confidence            47999999998764321     122346789999999887654 8999999999999999999999997643211 1111


Q ss_pred             HHH---hcCchhhhhhhccccc-cCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH--HHHhH
Q 031224           81 FVK---NALPEQISEVLDPLFV-TGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN--LQKVK  154 (163)
Q Consensus        81 ~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~--l~~~~  154 (163)
                      .+.   ......... .++... ...+........   ..........+.+|+.+||+.||.+|||+.|+++.  ++.+.
T Consensus       254 i~~~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          254 IIQIMGTPTKEQMIR-MNPHYTEVRFPTLKAKDWR---KILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             HHHHHCCCCHHHHHH-HCTTC--CCCCCCCCCCHH---HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred             HHHHhCCCCHHHHHH-hCcccccccCCccCcccHH---hhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence            111   111111111 111100 000000000000   00011123446889999999999999999999853  55444


Q ss_pred             H
Q 031224          155 S  155 (163)
Q Consensus       155 ~  155 (163)
                      +
T Consensus       330 ~  330 (383)
T 3eb0_A          330 N  330 (383)
T ss_dssp             H
T ss_pred             h
Confidence            3

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.76  E-value=2.7e-19  Score=127.40  Aligned_cols=125  Identities=22%  Similarity=0.352  Sum_probs=85.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|+|||++.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       195 ~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~  270 (334)
T 2pvf_A          195 VMKIADFGLARDINNIDY--YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFK  270 (334)
T ss_dssp             CEEECCCTTCEECTTTSS--EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH
T ss_pred             CEEEcccccccccccccc--ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--HHHH
Confidence            479999999987643211  111222346788999999877778999999999999999999 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+....        ..    ..+               ......+.+++.+||+.||.+|||+.++++.|+.+.+..
T Consensus       271 ~~~~~~--------~~----~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          271 LLKEGH--------RM----DKP---------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             HHHHTC--------CC----CCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHhcCC--------CC----CCC---------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            111000        00    000               012234678999999999999999999999999998754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=4.1e-19  Score=126.51  Aligned_cols=126  Identities=22%  Similarity=0.394  Sum_probs=79.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........++..|+|||.+.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~  261 (333)
T 1mqb_A          185 VCKVSDFGLSRVLEDDPEA-TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMK  261 (333)
T ss_dssp             CEEECCCCC------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH
T ss_pred             cEEECCCCcchhhcccccc-ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHH
Confidence            5799999999876432111 111122345778999999888889999999999999999998 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+..           . .....+               ......+.+++.+||+.||++|||+.++++.|+.+....
T Consensus       262 ~~~~-----------~-~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  311 (333)
T 1mqb_A          262 AIND-----------G-FRLPTP---------------MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  311 (333)
T ss_dssp             HHHT-----------T-CCCCCC---------------TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHC-----------C-CcCCCc---------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            1100           0 000000               012234678999999999999999999999999887643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.76  E-value=1.1e-19  Score=125.44  Aligned_cols=123  Identities=28%  Similarity=0.421  Sum_probs=84.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......++..|+|||.+.+..++.++|+||+|++++++++ |..||......  ....
T Consensus       142 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~  216 (267)
T 3t9t_A          142 VIKVSDFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVE  216 (267)
T ss_dssp             CEEECCTTGGGGBCCHHHH---STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH
T ss_pred             CEEEccccccccccccccc---ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHH
Confidence            4799999999876432111   1122346778999999887788999999999999999999 89998653111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....        ..    ..+.               .....+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       217 ~i~~~~--------~~----~~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          217 DISTGF--------RL----YKPR---------------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             HHHTTC--------CC----CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHhcCC--------cC----CCCc---------------cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            111000        00    0000               1123467899999999999999999999999998874

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.76  E-value=9.9e-20  Score=125.78  Aligned_cols=123  Identities=26%  Similarity=0.373  Sum_probs=83.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......   .......++..|+|||.+.+..++.++|+||+|++++++++ |..||.......  ...
T Consensus       142 ~~~l~Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~  216 (268)
T 3sxs_A          142 CVKVSDFGMTRYVLDDQY---VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VVL  216 (268)
T ss_dssp             CEEECCTTCEEECCTTCE---EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHH
T ss_pred             CEEEccCccceecchhhh---hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--HHH
Confidence            579999999987644311   11122345678999999887788999999999999999998 999986432110  110


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....        ..    ..+.               .....+.+++.+||+.||++|||+.++++.|+.+.++
T Consensus       217 ~~~~~~--------~~----~~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          217 KVSQGH--------RL----YRPH---------------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHTTC--------CC----CCCT---------------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHHcCC--------CC----CCCC---------------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            000000        00    0000               1123467899999999999999999999999988654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.76  E-value=1.3e-19  Score=134.17  Aligned_cols=63  Identities=27%  Similarity=0.319  Sum_probs=44.0

Q ss_pred             ceeecccccccccCccccCC-----------------------CcccccccccccccCCCCCC-CCCCccccceehhhHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSN-----------------------QSSSIGLKGTVGYAPPEYGM-GSRVSTYGDVYSYGIL   57 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~-----------------------~~~~~~~~g~~~y~~pe~~~-~~~~~~~~di~s~g~~   57 (163)
                      .+||+|||+++.........                       .......+||++|+|||++. ...++.++|||||||+
T Consensus       194 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i  273 (458)
T 3rp9_A          194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI  273 (458)
T ss_dssp             CEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             CEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence            58999999998764321100                       01234467899999999764 4568999999999999


Q ss_pred             HHHHHhC
Q 031224           58 LLETFTG   64 (163)
Q Consensus        58 ~~e~~~g   64 (163)
                      ++|+++|
T Consensus       274 l~elltg  280 (458)
T 3rp9_A          274 FAELLNM  280 (458)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHh
Confidence            9999983

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.76  E-value=9.8e-20  Score=134.64  Aligned_cols=123  Identities=24%  Similarity=0.386  Sum_probs=80.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......   .......++..|+|||.+.+..++.++||||||++++|+++ |..||.+....  ....
T Consensus       318 ~~kl~DfG~a~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~  392 (452)
T 1fmk_A          318 VCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLD  392 (452)
T ss_dssp             CEEECCCCTTC-----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH
T ss_pred             CEEECCCccceecCCCce---ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            579999999987643211   11122346778999999887889999999999999999999 89999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....            ...+               ..+...+.+++.+||+.||++|||++++++.|+.+.++
T Consensus       393 ~i~~~~~------------~~~~---------------~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          393 QVERGYR------------MPCP---------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHTTCC------------CCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHcCCC------------CCCC---------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            1111000            0000               02234467899999999999999999999999887543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.76  E-value=1.2e-19  Score=128.87  Aligned_cols=138  Identities=21%  Similarity=0.278  Sum_probs=88.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++........ ........++..|+|||.+.+..++.++|+||||++++++++|..|+......   ....
T Consensus       183 ~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~  258 (326)
T 2w1i_A          183 RVKIGDFGLTKVLPQDKEY-YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRM  258 (326)
T ss_dssp             EEEECCCTTCEECCSSCSE-EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHH
T ss_pred             cEEEecCcchhhccccccc-cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHh
Confidence            4799999999876543111 11112234677899999988777889999999999999999999887532100   0000


Q ss_pred             HHhcCc-----hhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           82 VKNALP-----EQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        82 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      ......     ......+........+               ......+.+++.+||+.||++|||+.++++.|+.+.++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          259 IGNDKQGQMIVFHLIELLKNNGRLPRP---------------DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             HCTTCCTHHHHHHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hccccchhhhHHHHHHHhhcCCCCCCC---------------CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            000000     0011111110000000               02234577899999999999999999999999999988


Q ss_pred             HH
Q 031224          157 LL  158 (163)
Q Consensus       157 ~~  158 (163)
                      +.
T Consensus       324 l~  325 (326)
T 2w1i_A          324 MA  325 (326)
T ss_dssp             HH
T ss_pred             hc
Confidence            74

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.76  E-value=3e-19  Score=126.36  Aligned_cols=142  Identities=20%  Similarity=0.222  Sum_probs=80.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......    .......|+..|+|||++.+. .++.++|+||+||+++++++|+.||.+..... .+..
T Consensus       146 ~~kl~Dfg~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~  220 (317)
T 2pmi_A          146 QLKLGDFGLARAFGIPV----NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKL  220 (317)
T ss_dssp             CEEECCCSSCEETTSCC----CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred             CEEECcCccceecCCCc----ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHH
Confidence            57999999998764321    112234689999999998764 58899999999999999999999997543211 0111


Q ss_pred             HHH--hcCchhhhhhhcc--ccccCCCCCC-CchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVK--NALPEQISEVLDP--LFVTGGEEGE-GTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~--~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...  ..........+..  .......... ..................+.+|+.+||+.||++|||+.|+++
T Consensus       221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          221 IFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             HHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            100  0000000000000  0000000000 000000000000112335778999999999999999999975

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.76  E-value=1.3e-19  Score=126.50  Aligned_cols=138  Identities=17%  Similarity=0.191  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......    .......|+..|+|||++.+. .++.++|+||+||+++++++|..||.+..... .+..
T Consensus       138 ~~kl~Dfg~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~  212 (288)
T 1ob3_A          138 ELKIADFGLARAFGIPV----RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMR  212 (288)
T ss_dssp             CEEECCTTHHHHHCC-------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred             CEEEeECccccccCccc----cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            57999999998754321    112234679999999998764 48899999999999999999999996542211 1111


Q ss_pred             HHHh---cCchhhhhhhc-cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKN---ALPEQISEVLD-PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....   .....+..... +..............    ..........+.+|+.+||+.||++|||++|+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW----ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCG----GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHCCCChhhchhhhcccccccccccccCccH----HHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            1100   00000000000 000000000000000    0000112344678999999999999999999975

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.75  E-value=6.7e-20  Score=131.10  Aligned_cols=119  Identities=17%  Similarity=0.206  Sum_probs=79.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC-cchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~~~~   80 (163)
                      .+||+|||+++.....    .......+|++.|+|||++.+..++.++|+||+||+++++++|..||....... ..+..
T Consensus       158 ~~kl~Dfg~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~  233 (342)
T 2qr7_A          158 SIRICDFGFAKQLRAE----NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA  233 (342)
T ss_dssp             GEEECCCTTCEECBCT----TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHH
T ss_pred             eEEEEECCCcccCcCC----CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHH
Confidence            3899999999876432    112233568999999999877678899999999999999999999996532111 01111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+..           .........             .......+.+|+.+||..||++|||+.++++
T Consensus       234 ~i~~-----------~~~~~~~~~-------------~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          234 RIGS-----------GKFSLSGGY-------------WNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHH-----------CCCCCCSTT-------------TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHcc-----------CCcccCccc-------------cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1110           000000000             0011234678999999999999999999875

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.75  E-value=3.7e-19  Score=128.62  Aligned_cols=116  Identities=19%  Similarity=0.149  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+....     ......|++.|+|||++.+..++.++|+|||||+++++++|..||.+..... .+...
T Consensus       227 ~~kl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i  300 (373)
T 2x4f_A          227 QIKIIDFGLARRYKPRE-----KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNNI  300 (373)
T ss_dssp             EEEECCCSSCEECCTTC-----BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHH
T ss_pred             cEEEEeCCCceecCCcc-----ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence            48999999998764321     1123468999999999988888999999999999999999999996532110 01111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...            .......             ........+.+|+.+||+.||.+|||+.|+++
T Consensus       301 ~~~------------~~~~~~~-------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          301 LAC------------RWDLEDE-------------EFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHT------------CCCSCSG-------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             Hhc------------cCCCChh-------------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            100            0000000             00011234678999999999999999999987

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.75  E-value=7.3e-20  Score=132.14  Aligned_cols=136  Identities=15%  Similarity=0.140  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....       .....|+..|+|||++.+ ..++.++|+||+||+++++++|+.||.+..... .+..
T Consensus       182 ~~kL~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~  253 (371)
T 4exu_A          182 ELKILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQ  253 (371)
T ss_dssp             CEEECSTTCC---------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred             CEEEEecCcccccccC-------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHH
Confidence            5899999999865322       223468999999999877 568999999999999999999999997542211 0111


Q ss_pred             HHH--hcCchhhhhhhcccc----ccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVK--NALPEQISEVLDPLF----VTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...  ..........+....    ............    ..........+.+|+.+||+.||++|||+.|+++.
T Consensus       254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          254 ILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF----TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCH----HHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhH----HHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            100  000001100000000    000000000000    00011223457889999999999999999999763

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.75  E-value=8.5e-20  Score=129.69  Aligned_cols=122  Identities=17%  Similarity=0.198  Sum_probs=63.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC--cchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG--LDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~--~~~~   79 (163)
                      .+||+|||+++.....    .......+|+..|+|||++.+..++.++|+||+|++++++++|..||.......  ....
T Consensus       147 ~~kl~Dfg~a~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~  222 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPD----NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV  222 (325)
T ss_dssp             EEEECCCTTCEECCC--------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHH
T ss_pred             cEEEeccccceecCCC----CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHH
Confidence            5899999999865432    112233468999999999988889999999999999999999999997643211  0111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....        .........             ..........+.+|+.+||+.||.+|||++++++
T Consensus       223 ~~~~~--------i~~~~~~~~-------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          223 EIMKK--------IKKGDFSFE-------------GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHHHH--------HTTTCCCCC-------------SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             HHHHH--------HHcCCCCCC-------------cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            11110        000000000             0000122345678999999999999999998873

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.75  E-value=5.3e-19  Score=123.47  Aligned_cols=113  Identities=22%  Similarity=0.371  Sum_probs=75.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++......      ......|+..|+|||.+. ..++.++|+||+|++++++++|..||......    ...
T Consensus       170 ~~kl~Dfg~~~~~~~~------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~  238 (290)
T 1t4h_A          170 SVKIGDLGLATLKRAS------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQI  238 (290)
T ss_dssp             CEEECCTTGGGGCCTT------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHH
T ss_pred             CEEEeeCCCccccccc------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHH
Confidence            5799999999764322      122346899999999876 45889999999999999999999999653211    111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ............++.                       .....+.+++.+||+.||.+|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~-----------------------~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          239 YRRVTSGVKPASFDK-----------------------VAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHTTTCCCGGGGG-----------------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhccCCccccCC-----------------------CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            110000000000000                       11234678999999999999999999986

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.75  E-value=1.3e-19  Score=126.34  Aligned_cols=115  Identities=17%  Similarity=0.233  Sum_probs=68.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCC----CCCCCccccceehhhHHHHHHHhCCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYG----MGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~----~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~   77 (163)
                      .+||+|||+++......     ......|+..|+|||.+    ....++.++|+||+|++++++++|..||.........
T Consensus       148 ~~kl~Dfg~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  222 (290)
T 3fme_A          148 QVKMCDFGISGYLVDDV-----AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ  222 (290)
T ss_dssp             CEEBCCC--------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH
T ss_pred             CEEEeecCCcccccccc-----cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH
Confidence            57999999998764321     11223688999999985    4456889999999999999999999999642211111


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .........            ......               .....+.+++.+||+.||++|||+.++++
T Consensus       223 ~~~~~~~~~------------~~~~~~---------------~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          223 LKQVVEEPS------------PQLPAD---------------KFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHSCC------------CCCCTT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHhccCC------------CCcccc---------------cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            111111100            000000               11234678999999999999999999987

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.75  E-value=3.1e-19  Score=126.70  Aligned_cols=121  Identities=23%  Similarity=0.303  Sum_probs=82.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....     .......++..|+|||.+.+..++.++|+||+|++++++++ |..||.+...     ..
T Consensus       180 ~~kL~Dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~  249 (327)
T 1fvr_A          180 VAKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AE  249 (327)
T ss_dssp             CEEECCTTCEESSCEE-----CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HH
T ss_pred             eEEEcccCcCcccccc-----ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----HH
Confidence            5799999998754321     11122346778999999877778999999999999999998 9999965321     11


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .... ...       . .....+.               .....+.+++.+||+.||++|||+.++++.|..+.++
T Consensus       250 ~~~~-~~~-------~-~~~~~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          250 LYEK-LPQ-------G-YRLEKPL---------------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             HHHH-GGG-------T-CCCCCCT---------------TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHH-hhc-------C-CCCCCCC---------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            1110 000       0 0000000               1123467899999999999999999999999988765

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.75  E-value=1.2e-19  Score=130.95  Aligned_cols=137  Identities=17%  Similarity=0.180  Sum_probs=74.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     .......|+..|+|||++.+..++.++||||+||+++++++|..||.+..... .+...
T Consensus       165 ~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i  238 (371)
T 2xrw_A          165 TLKILDFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKV  238 (371)
T ss_dssp             CEEECCCCC---------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred             CEEEEEeecccccccc-----cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence            5799999999865432     11223568999999999988889999999999999999999999997532211 01111


Q ss_pred             HHh----------cCchhhhhhhccccccCCCCCCCchhhhh--------hhHhhHHHHHHHHHHHhhcCCCCcCCCCCH
Q 031224           82 VKN----------ALPEQISEVLDPLFVTGGEEGEGTAEEKL--------KQDQVQESLATILKIGVACSVESPRERMDI  143 (163)
Q Consensus        82 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  143 (163)
                      +..          .........+..    ... .........        ...........+.+|+.+||+.||++|||+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~  313 (371)
T 2xrw_A          239 IEQLGTPCPEFMKKLQPTVRTYVEN----RPK-YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV  313 (371)
T ss_dssp             HC-CCCCCHHHHTTSCHHHHHHHHS----SCC-CCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHHhCCCCHHHHHHhhhHHHHHHhh----Ccc-ccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCH
Confidence            000          000000000000    000 000000000        001112334567889999999999999999


Q ss_pred             HHHHHH
Q 031224          144 SDVVNN  149 (163)
Q Consensus       144 ~~v~~~  149 (163)
                      +|+++.
T Consensus       314 ~e~l~h  319 (371)
T 2xrw_A          314 DEALQH  319 (371)
T ss_dssp             HHHHHS
T ss_pred             HHHhCC
Confidence            999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.75  E-value=3.5e-19  Score=124.80  Aligned_cols=125  Identities=22%  Similarity=0.402  Sum_probs=79.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......   ........|++.|+|||.+.+..++.++|+||+|++++++++|+.||.+...... ....
T Consensus       149 ~~kl~Dfg~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~  224 (294)
T 4eqm_A          149 TLKIFDFGIAKALSETS---LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-AIKH  224 (294)
T ss_dssp             CEEECCCSSSTTC----------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-HHHH
T ss_pred             CEEEEeCCCcccccccc---ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHH
Confidence            47999999998764321   1112234689999999999888889999999999999999999999965321110 0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-CHHHHHHHHHHhH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-DISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-s~~~v~~~l~~~~  154 (163)
                      .....+. ....+.                       ......+.+++.+||+.||.+|| +++++.+.|..+.
T Consensus       225 ~~~~~~~-~~~~~~-----------------------~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          225 IQDSVPN-VTTDVR-----------------------KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             HSSCCCC-HHHHSC-----------------------TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             hhccCCC-cchhcc-----------------------cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            1000000 000000                       01234467899999999999999 8999998888764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.75  E-value=2e-19  Score=131.56  Aligned_cols=114  Identities=13%  Similarity=0.148  Sum_probs=78.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCC----------CCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYG----------MGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~----------~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....       ....+| +.|+|||++          ....++.++|||||||+++++++|+.||...
T Consensus       249 ~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~  320 (413)
T 3dzo_A          249 GVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDD  320 (413)
T ss_dssp             CEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTT
T ss_pred             eEEEEeccceeecCCc-------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            4799999999875432       223467 899999998          4555888999999999999999999999654


Q ss_pred             cccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH--
Q 031224           72 FAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN--  149 (163)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~--  149 (163)
                      .....             ....+..    . .                .....+.+|+.+||+.||.+|||+.++++.  
T Consensus       321 ~~~~~-------------~~~~~~~----~-~----------------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~  366 (413)
T 3dzo_A          321 AALGG-------------SEWIFRS----C-K----------------NIPQPVRALLEGFLRYPKEDRLLPLQAMETPE  366 (413)
T ss_dssp             GGGSC-------------SGGGGSS----C-C----------------CCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred             chhhh-------------HHHHHhh----c-c----------------cCCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence            22110             0000110    0 0                011346789999999999999999988654  


Q ss_pred             HHHhHHHH
Q 031224          150 LQKVKSTL  157 (163)
Q Consensus       150 l~~~~~~~  157 (163)
                      +..+.+.+
T Consensus       367 ~~~~~~~~  374 (413)
T 3dzo_A          367 YEQLRTEL  374 (413)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            44444433

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.75  E-value=5.6e-19  Score=123.82  Aligned_cols=115  Identities=17%  Similarity=0.215  Sum_probs=76.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC---CccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR---VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~---~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.+...    ........|++.|+|||.+.+..   ++.++|+||||++++++++|+.||.+....  ..
T Consensus       175 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~  248 (298)
T 2zv2_A          175 HIKIADFGVSNEFKGS----DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM--CL  248 (298)
T ss_dssp             CEEECCCTTCEECSSS----SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH
T ss_pred             CEEEecCCCccccccc----cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH--HH
Confidence            5799999999876432    11122356899999999987654   367789999999999999999999653110  11


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...+..           ........               ......+.+++.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~-----------~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          249 HSKIKS-----------QALEFPDQ---------------PDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHH-----------CCCCCCSS---------------SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHhc-----------ccCCCCCc---------------cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            111100           00000000               011234678999999999999999999875

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.75  E-value=1e-18  Score=127.53  Aligned_cols=69  Identities=19%  Similarity=0.302  Sum_probs=48.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.+...... .......+||+.|+|||++.+.. ++.++||||+||+++++++|..||...
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          170 RVKIADMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             CEEECCTTCCC-----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             cEEEEECCCceecCCCCcc-cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence            5899999999876432111 11223457899999999987754 889999999999999999999999653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.75  E-value=2.2e-19  Score=124.72  Aligned_cols=126  Identities=21%  Similarity=0.314  Sum_probs=85.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......   .......++..|+|||.+.+..++.++|+||||++++++++ |..||.+....  ....
T Consensus       147 ~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~  221 (279)
T 1qpc_A          147 SCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQ  221 (279)
T ss_dssp             CEEECCCTTCEECSSSCE---ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH
T ss_pred             CEEECCCcccccccCccc---ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHH
Confidence            579999999987643211   11122346778999999877778899999999999999999 89998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR  159 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~  159 (163)
                      .+....        ..    ..+.               .....+.+++.+||+.||++|||+.++++.|+++......
T Consensus       222 ~~~~~~--------~~----~~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  273 (279)
T 1qpc_A          222 NLERGY--------RM----VRPD---------------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG  273 (279)
T ss_dssp             HHHTTC--------CC----CCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred             HHhccc--------CC----CCcc---------------cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence            111000        00    0000               1123467899999999999999999999999998876543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.75  E-value=3.3e-19  Score=129.43  Aligned_cols=117  Identities=18%  Similarity=0.214  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     .......||..|+|||++.+..++.++||||+||+++++++|..||.+....  .....
T Consensus       189 ~vkL~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~  261 (387)
T 1kob_A          189 SVKIIDFGLATKLNPD-----EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQN  261 (387)
T ss_dssp             CEEECCCTTCEECCTT-----SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHH
T ss_pred             ceEEEecccceecCCC-----cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4899999999876432     1122346899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...           ........             .......+.+|+.+||+.||++|||+.++++.
T Consensus       262 i~~~-----------~~~~~~~~-------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          262 VKRC-----------DWEFDEDA-------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHC-----------CCCCCSST-------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHhC-----------CCCCCccc-------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            1000           00000000             00112346789999999999999999999863

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.75  E-value=1.8e-19  Score=129.72  Aligned_cols=140  Identities=14%  Similarity=0.158  Sum_probs=81.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........|++.|+|||++.+. .++.++|+||+||+++++++|+.||.+.....  ...
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~  242 (364)
T 3qyz_A          166 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--QLN  242 (364)
T ss_dssp             CEEECCCTTCEECCGGGCB-CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG--HHH
T ss_pred             CEEEEeCcceEecCCCCCc-cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH--HHH
Confidence            5799999999876543211 1112345789999999986554 48899999999999999999999997643221  111


Q ss_pred             HHHhc----Cchhhhhhhcc---ccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNA----LPEQISEVLDP---LFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+...    .........+.   ......+........    .........+.+|+.+||+.||.+|||+.|+++
T Consensus       243 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          243 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN----RLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH----HHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHH----HhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            11110    00011000000   000000000000000    011122345678999999999999999999986

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=3.8e-19  Score=127.26  Aligned_cols=137  Identities=15%  Similarity=0.134  Sum_probs=81.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+....    .......|++.|+|||++.+.. ++.++|+||+||+++++++|..||.+..... .+..
T Consensus       150 ~~kl~Dfg~a~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~  224 (346)
T 1ua2_A          150 VLKLADFGLAKSFGSPN----RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTR  224 (346)
T ss_dssp             CEEECCCGGGSTTTSCC----CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             CEEEEecccceeccCCc----ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHH
Confidence            57999999998764321    1223356899999999986644 7889999999999999999999986532211 1111


Q ss_pred             HHHh---cCchhhhhhhc--cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKN---ALPEQISEVLD--PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....   .....+.....  ..+.  ........    ...........+.+|+.+||+.||++|||+.|+++.
T Consensus       225 i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          225 IFETLGTPTEEQWPDMCSLPDYVT--FKSFPGIP----LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             HHHHHCCCCTTTSSSTTSSTTCCC--CCCCCCCC----HHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHcCCCChhhhhhhccCccccc--ccccCCCC----hHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            1111   00001110000  0000  00000000    000111223557889999999999999999999863

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.75  E-value=2e-18  Score=123.24  Aligned_cols=114  Identities=18%  Similarity=0.216  Sum_probs=79.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+||+||+++++++|+.||.+....  .....
T Consensus       143 ~vkL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~  216 (337)
T 1o6l_A          143 HIKITDFGLCKEGISD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL  216 (337)
T ss_dssp             CEEECCCTTCBCSCCT----TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEeeccchhhcccC----CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHHH
Confidence            4799999999864322    11223457999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +.           .....  .+.               .....+.+++.+||+.||++||     +++++++.
T Consensus       217 i~-----------~~~~~--~p~---------------~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          217 IL-----------MEEIR--FPR---------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HH-----------HCCCC--CCT---------------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HH-----------cCCCC--CCC---------------CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            10           00000  000               1123457789999999999999     89988764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.75  E-value=5.7e-19  Score=122.84  Aligned_cols=117  Identities=20%  Similarity=0.252  Sum_probs=79.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++.......     ......|++.|+|||.+.+..++.++|+||+|++++++++|..||.+....  .....
T Consensus       146 ~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~  218 (284)
T 3kk8_A          146 AVKLADFGLAIEVNDSE-----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQ  218 (284)
T ss_dssp             CEEECCCTTCEECCSSC-----BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             cEEEeeceeeEEcccCc-----cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHH
Confidence            38999999997764321     122356899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...           ......+.             .......+.+++.+||+.||++|||+.|+++.
T Consensus       219 ~~~~-----------~~~~~~~~-------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          219 IKAG-----------AYDYPSPE-------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             HHHT-----------CCCCCTTT-------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHhc-----------cccCCchh-------------hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            1000           00000000             00112346789999999999999999999763

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.74  E-value=1.2e-18  Score=126.79  Aligned_cols=65  Identities=22%  Similarity=0.362  Sum_probs=54.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+||+||+++++++|+.||..
T Consensus       191 ~ikL~DFGla~~~~~~----~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~  255 (396)
T 4dc2_A          191 HIKLTDYGMCKEGLRP----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  255 (396)
T ss_dssp             CEEECCCTTCBCCCCT----TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             CEEEeecceeeecccC----CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            5799999999863221    1223346799999999999988899999999999999999999999964

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.74  E-value=1.2e-18  Score=126.29  Aligned_cols=115  Identities=22%  Similarity=0.288  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.+...     ......+||+.|+|||++..   ..++.++|+||+||+++++++|+.||.......  .
T Consensus       153 ~vkL~DFG~a~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~  225 (384)
T 4fr4_A          153 HVHITDFNIAAMLPRE-----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--S  225 (384)
T ss_dssp             CEEECCCTTCEECCTT-----CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--H
T ss_pred             CEEEeccceeeeccCC-----CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--H
Confidence            5799999999876432     12234579999999999864   348899999999999999999999996532211  1


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-HHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-ISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-~~~v~~  148 (163)
                      .......        ..... ....                .....+.+|+.+||+.||.+||+ ++++++
T Consensus       226 ~~~~~~~--------~~~~~-~~p~----------------~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          226 KEIVHTF--------ETTVV-TYPS----------------AWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHH--------HHCCC-CCCT----------------TSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHH--------hhccc-CCCC----------------cCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            1111000        00000 0000                11234678999999999999999 666653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.74  E-value=1.7e-19  Score=125.90  Aligned_cols=128  Identities=20%  Similarity=0.293  Sum_probs=82.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........++..|+|||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~  235 (291)
T 1u46_A          159 LVKIGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILH  235 (291)
T ss_dssp             EEEECCCTTCEECCC-CCE-EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH
T ss_pred             CEEEccccccccccccccc-hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHH
Confidence            4799999999876443111 111122356778999999877778899999999999999999 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+..           .......+               ......+.+++.+||+.||++|||+.++++.|.++..+-.
T Consensus       236 ~~~~-----------~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  287 (291)
T 1u46_A          236 KIDK-----------EGERLPRP---------------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM  287 (291)
T ss_dssp             HHHT-----------SCCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             HHHc-----------cCCCCCCC---------------cCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence            1100           00000000               0123446789999999999999999999999998876544

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.74  E-value=8.3e-19  Score=125.09  Aligned_cols=107  Identities=17%  Similarity=0.275  Sum_probs=77.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....     .......|++.|+|||++.+..+ +.++|||||||+++++++|..||......      
T Consensus       168 ~~kL~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------  236 (335)
T 3dls_A          168 TIKLIDFGSAAYLERG-----KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------  236 (335)
T ss_dssp             CEEECCCTTCEECCTT-----CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------
T ss_pred             cEEEeecccceECCCC-----CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------
Confidence            5899999999876432     11223568999999999887776 78899999999999999999999652110      


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                                   .......  +.               .....+.+|+.+||+.||.+|||+.++++.
T Consensus       237 -------------~~~~~~~--~~---------------~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          237 -------------VEAAIHP--PY---------------LVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             -------------TTTCCCC--SS---------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             -------------HhhccCC--Cc---------------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                         0000000  00               012346789999999999999999999874

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.74  E-value=3.8e-19  Score=126.36  Aligned_cols=117  Identities=18%  Similarity=0.158  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|++.|+|||++.+..++.++|+||+|++++++++|+.||.......  ....
T Consensus       172 ~~kL~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~  244 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGHAC-----ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--TYLN  244 (327)
T ss_dssp             CEEECCGGGCEEC--------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH
T ss_pred             cEEEeeCccccccCCcc-----ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHH
Confidence            47999999998764321     1123468999999999988889999999999999999999999996532111  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +.....        .   ....             ........+.+++.+||+.||.+|||++++++.
T Consensus       245 i~~~~~--------~---~~~~-------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          245 ISQVNV--------D---YSEE-------------TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHHTCC--------C---CCTT-------------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HHhccc--------c---cCch-------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            000000        0   0000             000122346789999999999999999999753

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.74  E-value=4.7e-19  Score=136.21  Aligned_cols=124  Identities=19%  Similarity=0.317  Sum_probs=83.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........   ......+++.|+|||++.+..++.++||||||++++|+++ |..||.+....  ....
T Consensus       529 ~vkL~DFG~a~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~  603 (656)
T 2j0j_A          529 CVKLGDFGLSRYMEDSTYY---KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIG  603 (656)
T ss_dssp             EEEECCCCCCCSCCC-------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH
T ss_pred             CEEEEecCCCeecCCCcce---eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHH
Confidence            4799999999876433111   1122356788999999887789999999999999999997 99999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+....           .. ..+               ......+.+++.+||+.||++|||+.++++.|+++.++.
T Consensus       604 ~i~~~~-----------~~-~~~---------------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~  653 (656)
T 2j0j_A          604 RIENGE-----------RL-PMP---------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  653 (656)
T ss_dssp             HHHHTC-----------CC-CCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHcCC-----------CC-CCC---------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            111000           00 000               012334678999999999999999999999999997653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.74  E-value=2.6e-19  Score=126.51  Aligned_cols=129  Identities=18%  Similarity=0.135  Sum_probs=78.9

Q ss_pred             ceeecccccccccCcccc-CCCcccccccccccccCCCCCCC---------CCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIR-SNQSSSIGLKGTVGYAPPEYGMG---------SRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~g~~~y~~pe~~~~---------~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++....... ..........|+..|+|||.+..         ..++.++||||||++++++++|..||...
T Consensus       167 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  246 (319)
T 2y4i_B          167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ  246 (319)
T ss_dssp             CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred             CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            478999999876532111 11112223458899999998764         34788999999999999999999999653


Q ss_pred             cccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Q 031224           72 FAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQ  151 (163)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~  151 (163)
                      ...  .....+...        ..+.....                  .....+.+++.+||+.||.+|||+.++++.|+
T Consensus       247 ~~~--~~~~~~~~~--------~~~~~~~~------------------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~  298 (319)
T 2y4i_B          247 PAE--AIIWQMGTG--------MKPNLSQI------------------GMGKEISDILLFCWAFEQEERPTFTKLMDMLE  298 (319)
T ss_dssp             CHH--HHHHHHHTT--------CCCCCCCS------------------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred             CHH--HHHHHhccC--------CCCCCCcC------------------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence            211  011111000        00000000                  01123567999999999999999999999999


Q ss_pred             HhHHHHH
Q 031224          152 KVKSTLL  158 (163)
Q Consensus       152 ~~~~~~~  158 (163)
                      .+.+...
T Consensus       299 ~l~~~~~  305 (319)
T 2y4i_B          299 KLPKRNR  305 (319)
T ss_dssp             TC-----
T ss_pred             HHHHhhc
Confidence            9887653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.74  E-value=4.6e-19  Score=127.04  Aligned_cols=112  Identities=22%  Similarity=0.315  Sum_probs=76.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.....        ....|++.|+|||++.   ...++.++|||||||+++++++|+.||.+..... ..
T Consensus       192 ~~kL~DfG~a~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~  262 (348)
T 1u5q_A          192 LVKLGDFGSASIMAPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-AL  262 (348)
T ss_dssp             EEEECCCTTCBSSSSB--------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HH
T ss_pred             CEEEeeccCceecCCC--------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HH
Confidence            5799999999865321        2346899999999874   4568899999999999999999999996532111 00


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .......         .+.....                  .....+.+|+.+||+.||++|||++++++.
T Consensus       263 ~~~~~~~---------~~~~~~~------------------~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          263 YHIAQNE---------SPALQSG------------------HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHSC---------CCCCCCT------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHhcC---------CCCCCCC------------------CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            0000000         0000000                  112335678999999999999999999753

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.74  E-value=4e-19  Score=122.69  Aligned_cols=117  Identities=20%  Similarity=0.227  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCc---cccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVS---TYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~---~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .++|+|||++.....         ....|++.|+|||.+.+..++   .++|+||||++++++++|+.||.+...... .
T Consensus       151 ~~~l~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~  220 (271)
T 3kmu_A          151 TARISMADVKFSFQS---------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-G  220 (271)
T ss_dssp             CEEEEGGGSCCTTSC---------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-H
T ss_pred             ceeEEeccceeeecc---------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-H
Confidence            356777766543211         124578999999998765544   379999999999999999999965321110 0


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .......        ..+.+..                   .....+.+++.+||+.||++|||++++++.|+.+.+
T Consensus       221 ~~~~~~~--------~~~~~~~-------------------~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          221 MKVALEG--------LRPTIPP-------------------GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHSC--------CCCCCCT-------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHhcC--------CCCCCCC-------------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            0000000        0000000                   112346789999999999999999999999998864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.74  E-value=1.2e-18  Score=123.43  Aligned_cols=117  Identities=16%  Similarity=0.212  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|++.|+|||.+.+..++.++|+||+|++++++++|..||.+....  .....
T Consensus       157 ~~kl~Dfg~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~  229 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGV-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLAN  229 (321)
T ss_dssp             CEEECCCTTCEECCTTC-----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHH
T ss_pred             CEEEccCccceecCccc-----cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--HHHHH
Confidence            58999999998764421     122346899999999998888999999999999999999999999653211  01111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +......     +++.                   ........+.+++.+||+.||++|||+.++++.
T Consensus       230 i~~~~~~-----~~~~-------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          230 ITSVSYD-----FDEE-------------------FFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             HHTTCCC-----CCHH-------------------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             HHhcccc-----cChh-------------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1000000     0000                   000112346789999999999999999999863

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.74  E-value=4.7e-19  Score=125.37  Aligned_cols=123  Identities=23%  Similarity=0.348  Sum_probs=83.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........++..|+|||.+.+..++.++|+||+|++++++++ |..||......  ....
T Consensus       176 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~  251 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVLR  251 (322)
T ss_dssp             CEEECCTTCCCGGGGGGC--EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHHH
T ss_pred             eEEECcCccccccccccc--cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHHH
Confidence            589999999986543211  111223456788999999887788999999999999999999 88888653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+.           .........                .....+.+++.+||+.||.+|||+.++++.|+++.+
T Consensus       252 ~~~-----------~~~~~~~~~----------------~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          252 FVM-----------EGGLLDKPD----------------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHH-----------TTCCCCCCT----------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHH-----------cCCcCCCCC----------------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            110           000000000                122346789999999999999999999999987643

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.74  E-value=2.2e-18  Score=126.77  Aligned_cols=119  Identities=19%  Similarity=0.239  Sum_probs=73.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHh-CCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~   77 (163)
                      .+||+|||+++........ ........||+.|+|||++.+   ..++.++||||+||+++++++ |..||......   
T Consensus       161 ~~kL~DFG~a~~~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---  236 (432)
T 3p23_A          161 KAMISDFGLCKKLAVGRHS-FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---  236 (432)
T ss_dssp             CEEECCTTEEECC-------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---
T ss_pred             eEEEecccceeeccCCCcc-eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---
Confidence            4789999999876543211 112234568999999999874   456778999999999999999 88898542111   


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .........           .......             .......+.+|+.+||+.||.+|||+.++++
T Consensus       237 ~~~~~~~~~-----------~~~~~~~-------------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          237 QANILLGAC-----------SLDCLHP-------------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHTTCC-----------CCTTSCT-------------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhccC-----------CccccCc-------------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            000000000           0000000             0022334578999999999999999999984

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.74  E-value=1.5e-19  Score=128.24  Aligned_cols=137  Identities=18%  Similarity=0.150  Sum_probs=76.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....    ........|+..|+|||++.+ ..++.++|+||+||+++++++|+.||.+.....  ...
T Consensus       138 ~~kl~Dfg~a~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~  211 (324)
T 3mtl_A          138 ELKLADFGLARAKSIP----TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE--QLH  211 (324)
T ss_dssp             CEEECSSSEEECC----------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHH
T ss_pred             CEEEccCcccccccCC----ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHH
Confidence            5799999999865432    111223467999999999876 458899999999999999999999997643211  111


Q ss_pred             HHHh----cCchhhhhhhccccc--cCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKN----ALPEQISEVLDPLFV--TGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+..    .....+.........  ...+......    ...........+.+|+.+||+.||.+|||++|+++
T Consensus       212 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          212 FIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEA----LLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCC----HHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHhCCCChHhchhhhcchhhcccccccccchh----hhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            1111    011111111110000  0000000000    00011122345678999999999999999999976

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.74  E-value=7.8e-19  Score=123.80  Aligned_cols=126  Identities=18%  Similarity=0.221  Sum_probs=74.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......   ........|+..|+|||.+.+..++.++|+||||++++++++|+.||......  .....
T Consensus       172 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~  246 (309)
T 2h34_A          172 FAYLVDFGIASATTDEK---LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAH  246 (309)
T ss_dssp             CEEECSCCC-------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHH
T ss_pred             CEEEecCccCccccccc---cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHH
Confidence            47999999998654321   11122346889999999998888899999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-CHHHHHHHHHHhHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-DISDVVNNLQKVKSTL  157 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-s~~~v~~~l~~~~~~~  157 (163)
                      +....+.  .....                       ......+.+++.+||+.||++|| |++++++.|+.+....
T Consensus       247 ~~~~~~~--~~~~~-----------------------~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          247 INQAIPR--PSTVR-----------------------PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             HHSCCCC--GGGTS-----------------------TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             hccCCCC--ccccC-----------------------CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence            1110000  00000                       01123467789999999999999 8999999998775543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.74  E-value=5.2e-19  Score=125.52  Aligned_cols=124  Identities=23%  Similarity=0.353  Sum_probs=83.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........|+..|+|||.+.+..++.++|+||||++++++++ |..||......  ....
T Consensus       181 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~  256 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASY--YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLE  256 (327)
T ss_dssp             CEEECCCHHHHHHHC--------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH
T ss_pred             eEEECccccccccccccc--cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHH
Confidence            489999999976532211  111223457889999999887788999999999999999998 88998653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....        .    ..+.               .....+.+++.+||+.||.+|||+.++++.|..+...
T Consensus       257 ~~~~~~~--------~----~~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          257 FVTSGGR--------M----DPPK---------------NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             HHHTTCC--------C----CCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHhcCCC--------C----CCCC---------------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence            1111000        0    0000               1123467899999999999999999999999987654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.74  E-value=5.8e-19  Score=124.65  Aligned_cols=126  Identities=17%  Similarity=0.231  Sum_probs=82.6

Q ss_pred             ceeecccccccccCccccCC-----CcccccccccccccCCCCCCCCC---CccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSN-----QSSSIGLKGTVGYAPPEYGMGSR---VSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~g~~~y~~pe~~~~~~---~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+|||+++.........     ........|+..|+|||.+.+..   ++.++||||||++++++++|+.||.....
T Consensus       172 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  251 (317)
T 2buj_A          172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ  251 (317)
T ss_dssp             CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH
T ss_pred             CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc
Confidence            57999999987653211000     00112234688999999987543   68899999999999999999999965332


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ............            ......               ......+.+++.+||+.||.+|||+.++++.|+.+
T Consensus       252 ~~~~~~~~~~~~------------~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          252 KGDSVALAVQNQ------------LSIPQS---------------PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             TTSCHHHHHHCC--------------CCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             ccchhhHHhhcc------------CCCCcc---------------ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence            221221111110            000000               01123467899999999999999999999999876


Q ss_pred             H
Q 031224          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      .
T Consensus       305 ~  305 (317)
T 2buj_A          305 Q  305 (317)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.74  E-value=2.3e-19  Score=135.15  Aligned_cols=122  Identities=25%  Similarity=0.385  Sum_probs=84.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......   ......++..|+|||.+.+..++.++||||||++++|+++ |+.||.+....  ....
T Consensus       401 ~~kl~DFG~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~  475 (535)
T 2h8h_A          401 VCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLD  475 (535)
T ss_dssp             CEEECCTTSTTTCCCHHHH---TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHH
T ss_pred             cEEEcccccceecCCCcee---cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5899999999876432111   1112346778999999888889999999999999999999 89999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+.....            ...+               ..+...+.+|+.+||+.||++|||+++|++.|+.+..
T Consensus       476 ~i~~~~~------------~~~~---------------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          476 QVERGYR------------MPCP---------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHTTCC------------CCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHcCCC------------CCCC---------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            1111000            0000               0223446789999999999999999999999987754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.74  E-value=8e-19  Score=121.98  Aligned_cols=118  Identities=19%  Similarity=0.235  Sum_probs=82.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|+..|+|||.+.+..++.++|+||||++++++++|..|+....    ...  
T Consensus       160 ~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~--  228 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDG-----KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----KFF--  228 (284)
T ss_dssp             EEEECCCTTCEESSCCS-----CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----HHH--
T ss_pred             CEEECcchhheeccccc-----cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----HHH--
Confidence            47999999998764421     1223468999999999988888999999999999999999988774311    000  


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                               .......+..                   .....+..++.+||+.||.+|||+.++++.|..+.++..
T Consensus       229 ---------~~~~~~~~~~-------------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          229 ---------TDLRDGIISD-------------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             ---------HHHHTTCCCT-------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             ---------HHhhcccccc-------------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence                     0000111110                   012235678999999999999999999999998876544

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.74  E-value=2.9e-19  Score=128.39  Aligned_cols=134  Identities=16%  Similarity=0.141  Sum_probs=74.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....     .......|+..|+|||++.+ ..++.++|+||+||+++++++|+.||.+..... .+..
T Consensus       172 ~~kl~Dfg~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~  245 (362)
T 3pg1_A          172 DITICDFNLAREDTAD-----ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNK  245 (362)
T ss_dssp             CEEECCTTC--------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred             CEEEEecCcccccccc-----cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            4799999999764332     11233568899999998876 568899999999999999999999996532111 0111


Q ss_pred             HHHhcC-----------chhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNAL-----------PEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ......           .......+..........    .    ...........+.+|+.+||+.||.+|||+.++++.
T Consensus       246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR----A----WTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC----C----HHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHcCCCChHHhhhccchhhhHHHHhhcccCChh----h----HHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            100000           001111111111111000    0    001111223457789999999999999999999863

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.74  E-value=1.4e-18  Score=120.42  Aligned_cols=118  Identities=23%  Similarity=0.317  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++..+.....  ........|+..|+|||.+.+..+ +.++|+||+|++++++++|..||............
T Consensus       143 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  220 (276)
T 2yex_A          143 NLKISDFGLATVFRYNNR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD  220 (276)
T ss_dssp             CEEECCCTTCEECEETTE--ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH
T ss_pred             CEEEeeCCCccccCCCcc--hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH
Confidence            479999999986543211  111223568999999999887664 67899999999999999999999764322111111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ......      ....                     .......+.+++.+||+.||++|||+.++++
T Consensus       221 ~~~~~~------~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          221 WKEKKT------YLNP---------------------WKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHTTCT------TSTT---------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hhhccc------ccCc---------------------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            110000      0000                     0011234567999999999999999999875

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.73  E-value=4.5e-19  Score=127.65  Aligned_cols=119  Identities=19%  Similarity=0.257  Sum_probs=69.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccc-cceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTY-GDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~-~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....     .......|++.|+|||++.+..++.+ +||||+||+++++++|+.||.+..... ....
T Consensus       156 ~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~  229 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLH-----SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRK  229 (361)
T ss_dssp             CEEECCCCCC--------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHH
T ss_pred             eEEEeecCcccccccc-----CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHH
Confidence            3899999999754221     11223468999999999887776655 899999999999999999997643211 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+..        .......  .+...             .....+.+|+.+||+.||.+|||+.|+++.
T Consensus       230 ~~~~--------~~~~~~~--~~~~~-------------~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          230 TIQR--------ILSVKYS--IPDDI-------------RISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHH--------HHTTCCC--CCTTS-------------CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHH--------HhcCCCC--CCCcC-------------CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            1111        1110000  00000             112345789999999999999999999864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.73  E-value=4.1e-19  Score=125.34  Aligned_cols=119  Identities=24%  Similarity=0.365  Sum_probs=73.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-----------CCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-----------SRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-----------~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++........  .......|+..|+|||.+.+           ..++.++|+||||++++++++|..||..
T Consensus       164 ~~kL~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (313)
T 3cek_A          164 MLKLIDFGIANQMQPDTTS--VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  241 (313)
T ss_dssp             EEEECCCSSSCC----------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eEEEeeccccccccCcccc--ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence            4799999999876433111  11123468999999998765           3578899999999999999999999965


Q ss_pred             ccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           71 IFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .......            ....+++......+.               .....+.+++.+||+.||++|||+.++++.
T Consensus       242 ~~~~~~~------------~~~~~~~~~~~~~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          242 IINQISK------------LHAIIDPNHEIEFPD---------------IPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             CCSHHHH------------HHHHHCTTSCCCCCC---------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHH------------HHHHHhcccccCCcc---------------cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            3211100            111111111111110               012346778999999999999999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.73  E-value=1.3e-18  Score=128.37  Aligned_cols=114  Identities=17%  Similarity=0.213  Sum_probs=78.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+|||||+++++++|+.||.+....  .....
T Consensus       287 ~~kl~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~  360 (446)
T 4ejn_A          287 HIKITDFGLCKEGIKD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL  360 (446)
T ss_dssp             CEEECCCCCCCTTCC---------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEccCCCceeccCC----CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHH
Confidence            5899999999864332    11223457999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +..           ....  .+.               .....+.+|+.+||+.||.+||     |++++++.
T Consensus       361 i~~-----------~~~~--~p~---------------~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          361 ILM-----------EEIR--FPR---------------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             HHH-----------CCCC--CCT---------------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHh-----------CCCC--CCc---------------cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            100           0000  000               1123467899999999999999     99999763

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.73  E-value=2.7e-18  Score=127.98  Aligned_cols=116  Identities=19%  Similarity=0.194  Sum_probs=77.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     .....+|++.|+|||++.+ .++.++||||+||+++++++|..||.+....  .....
T Consensus       162 ~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~  233 (486)
T 3mwu_A          162 DIKIIDFGLSTCFQQNT-----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKR  233 (486)
T ss_dssp             CEEECSCSCTTTBCCC---------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEEECCcCeECCCCC-----ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            48999999998764321     1223568999999999865 5889999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +..           .......+             ........+.+|+.+||+.||.+|||+.++++.
T Consensus       234 i~~-----------~~~~~~~~-------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          234 VET-----------GKYAFDLP-------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHH-----------TCCCSCSG-------------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             HHh-----------CCCCCCCc-------------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            110           00000000             000112346789999999999999999999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.73  E-value=5.8e-19  Score=123.10  Aligned_cols=114  Identities=19%  Similarity=0.260  Sum_probs=72.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|+..|+|||.+. ..++.++|+||+|++++++++|+.||.+.....  ....
T Consensus       165 ~~kl~Dfg~a~~~~~~~-----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~  236 (285)
T 3is5_A          165 PIKIIDFGLAELFKSDE-----HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQK  236 (285)
T ss_dssp             CEEECCCCCCCC---------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH
T ss_pred             CEEEEeeecceecCCcc-----cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhh
Confidence            47999999998764321     122346899999999875 467899999999999999999999996532110  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....         .+.......                .....+.+++.+||+.||++|||+.|+++
T Consensus       237 ~~~~---------~~~~~~~~~----------------~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          237 ATYK---------EPNYAVECR----------------PLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHC---------CCCCCC--C----------------CCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             hccC---------CcccccccC----------------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0000         000000000                01234568999999999999999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.73  E-value=3.3e-19  Score=126.48  Aligned_cols=118  Identities=19%  Similarity=0.279  Sum_probs=60.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCC----CCCCCccccceehhhHHHHHHHhCCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYG----MGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~----~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~   77 (163)
                      .+||+|||+++......     ......|+..|+|||.+    .+..++.++|+||||++++++++|+.||.......  
T Consensus       164 ~~kl~Dfg~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--  236 (327)
T 3aln_A          164 NIKLCDFGISGQLVDSI-----AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--  236 (327)
T ss_dssp             EEEECCCSSSCC-----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------
T ss_pred             CEEEccCCCceeccccc-----ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--
Confidence            57999999998764321     11223688999999998    34558899999999999999999999996532110  


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                        ...........     +.+.....               ......+.+|+.+||+.||++|||+.++++
T Consensus       237 --~~~~~~~~~~~-----~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          237 --DQLTQVVKGDP-----PQLSNSEE---------------REFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             -----CCCCCSCC-----CCCCCCSS---------------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --HHHHHHhcCCC-----CCCCCccc---------------ccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence              00000000000     00000000               011234678999999999999999999976

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.73  E-value=6e-19  Score=123.28  Aligned_cols=116  Identities=19%  Similarity=0.277  Sum_probs=75.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC--CccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR--VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~--~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++......    .......|+..|+|||.+.+..  ++.++|+||||++++++++|+.||...........
T Consensus       161 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  236 (295)
T 2clq_A          161 VLKISDFGTSKRLAGIN----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF  236 (295)
T ss_dssp             CEEECCTTTCEESCC---------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH
T ss_pred             CEEEeecccccccCCCC----CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH
Confidence            47999999998764321    1122346899999999986543  78899999999999999999999965321110000


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..       ... ...+.+..                   .....+.+++.+||+.||++|||+.++++
T Consensus       237 ~~-------~~~-~~~~~~~~-------------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          237 KV-------GMF-KVHPEIPE-------------------SMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HH-------HHH-CCCCCCCT-------------------TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             hh-------ccc-cccccccc-------------------cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00       000 00000000                   11234677999999999999999999975

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.73  E-value=5.3e-19  Score=124.71  Aligned_cols=124  Identities=23%  Similarity=0.356  Sum_probs=72.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...... ........|++.|+|||.+.+..++.++||||||++++++++|+.||.+......... .
T Consensus       154 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-~  231 (311)
T 3ork_A          154 AVKVMDFGIARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ-H  231 (311)
T ss_dssp             CEEECCCSCC-------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-H
T ss_pred             CEEEeeccCcccccccccc-cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-H
Confidence            4799999999876443111 1122235689999999999888899999999999999999999999965321110000 0


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHH-HHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVV-NNLQK  152 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~-~~l~~  152 (163)
                      ......  ...                       .........+.+++.+||+.||.+||++.+++ +.|..
T Consensus       232 ~~~~~~--~~~-----------------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          232 VREDPI--PPS-----------------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HHCCCC--CHH-----------------------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             hcCCCC--Ccc-----------------------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            000000  000                       00001234467899999999999999866554 44443

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.72  E-value=2.4e-18  Score=121.90  Aligned_cols=135  Identities=19%  Similarity=0.202  Sum_probs=81.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|+..|+|||++.+..++.++|+||||++++++++|+.||.+..... .+...
T Consensus       158 ~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i  231 (326)
T 1blx_A          158 QIKLADFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKI  231 (326)
T ss_dssp             CEEECSCCSCCCCCGGG-----GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred             CEEEecCcccccccCCC-----CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHH
Confidence            47999999998764321     1223468999999999988889999999999999999999999997542211 11111


Q ss_pred             HHh-cC--chhhhhhhc-cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKN-AL--PEQISEVLD-PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~-~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ... ..  ...+..... +...  ........    ...........+.+|+.+||+.||.+|||+.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          232 LDVIGLPGEEDWPRDVALPRQA--FHSKSAQP----IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHHHCCCCGGGSCTTCSSCGGG--SCCCCCCC----GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHcCCCCcccCccccccchhh--hcccCcch----hhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            100 00  000000000 0000  00000000    00001122344678999999999999999999985

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.72  E-value=2.4e-18  Score=127.81  Aligned_cols=112  Identities=22%  Similarity=0.333  Sum_probs=78.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....     ......+|++.|+|||++.+..+ +.++|+||+||+++++++|+.||.+....  ....
T Consensus       154 ~vkL~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~  226 (476)
T 2y94_A          154 NAKIADFGLSNMMSDG-----EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFK  226 (476)
T ss_dssp             CEEECCCSSCEECCTT-----CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHH
T ss_pred             CeEEEeccchhhcccc-----ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHH
Confidence            5899999999876432     11233578999999999987765 67899999999999999999999653111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+           .+....  .+.               .....+.+|+.+||+.||.+|||+.++++
T Consensus       227 ~i-----------~~~~~~--~p~---------------~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          227 KI-----------CDGIFY--TPQ---------------YLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HH-----------HTTCCC--CCT---------------TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HH-----------hcCCcC--CCc---------------cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            11           111000  000               11234678999999999999999999986

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.72  E-value=3.2e-18  Score=122.55  Aligned_cols=65  Identities=22%  Similarity=0.362  Sum_probs=53.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+||+||+++++++|+.||..
T Consensus       148 ~~kL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          148 HIKLTDYGMCKEGLRP----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             CEEECCGGGCBCSCCT----TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CEEEEeccccccccCC----CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence            5799999999864321    1122345799999999999888899999999999999999999999964

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.72  E-value=1.1e-18  Score=122.57  Aligned_cols=115  Identities=18%  Similarity=0.280  Sum_probs=79.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++.......    .......|+..|+|||.+.+..++.++|+||||++++++++|..||......  .....
T Consensus       157 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~  230 (303)
T 3a7i_A          157 EVKLADFGVAGQLTDTQ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFL  230 (303)
T ss_dssp             CEEECCCTTCEECBTTB----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH
T ss_pred             CEEEeecccceecCccc----cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHH
Confidence            47999999998764321    1123346899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +....        .+.+..                   .....+.+++.+||+.||.+|||+.++++.
T Consensus       231 ~~~~~--------~~~~~~-------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          231 IPKNN--------PPTLEG-------------------NYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHSC--------CCCCCS-------------------SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             hhcCC--------CCCCcc-------------------ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            10000        000000                   112346789999999999999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.72  E-value=2.3e-18  Score=124.93  Aligned_cols=70  Identities=17%  Similarity=0.124  Sum_probs=52.5

Q ss_pred             ceeecccccccccCccc---cCCCcccccccccccccCCCCCCC--CCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAI---RSNQSSSIGLKGTVGYAPPEYGMG--SRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~~g~~~y~~pe~~~~--~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||.+.......   ...........|+..|+|||++.+  ..++.++||||+||+++++++|+.||.+.
T Consensus       166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence            57999999987543221   111112223468899999999877  46899999999999999999999999764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.72  E-value=9.7e-19  Score=124.75  Aligned_cols=119  Identities=17%  Similarity=0.170  Sum_probs=60.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....      ......|++.|+|||++.+..++.++|+||+|++++++++|..||...........  
T Consensus       169 ~~kl~Dfg~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--  240 (336)
T 3fhr_A          169 VLKLTDFGFAKETTQN------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--  240 (336)
T ss_dssp             CEEECCCTTCEEC----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred             eEEEeccccceecccc------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--
Confidence            3899999999865432      11234679999999999877889999999999999999999999965432211000  


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .......       .......+.             .......+.+|+.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~-------~~~~~~~~~-------------~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          241 MKRRIRL-------GQYGFPNPE-------------WSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             -----------------CCCTTT-------------STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhhhc-------cccccCchh-------------hccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            0000000       000000000             0012234678999999999999999999987

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.72  E-value=5.2e-19  Score=126.77  Aligned_cols=136  Identities=15%  Similarity=0.158  Sum_probs=77.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....       .....|+..|+|||.+.+ ..++.++|+||+|++++++++|..||.+..... .+..
T Consensus       164 ~~kl~Dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~  235 (353)
T 3coi_A          164 ELKILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQ  235 (353)
T ss_dssp             CEEECSTTCTTC---------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHH
T ss_pred             cEEEeecccccCCCCC-------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            5799999999865321       123467999999998876 568899999999999999999999997542211 0111


Q ss_pred             HHH--hcCchhhhhhhccc----cccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVK--NALPEQISEVLDPL----FVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...  ...+......+...    .....+........    .........+.+|+.+||+.||++|||+.++++.
T Consensus       236 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          236 ILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFT----QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTT----TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHH----HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            110  00000110000000    00000000000000    0001223456789999999999999999999753

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.72  E-value=2.3e-18  Score=128.61  Aligned_cols=116  Identities=16%  Similarity=0.213  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     ......+|++.|+|||++. ..++.++||||+||+++++++|..||.+....  .....
T Consensus       177 ~~kl~DfG~a~~~~~~-----~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~  248 (494)
T 3lij_A          177 LIKIVDFGLSAVFENQ-----KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRK  248 (494)
T ss_dssp             CEEECCCTTCEECBTT-----BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             cEEEEECCCCeECCCC-----ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            3899999999876432     1223356899999999875 46899999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...           ......+.             .......+.+|+.+||+.||.+|||+.++++.
T Consensus       249 i~~~-----------~~~~~~~~-------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          249 VEKG-----------KYTFDSPE-------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             HHHT-----------CCCCCSGG-------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             HHhC-----------CCCCCchh-------------cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            1110           00000000             00112346789999999999999999999864

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.72  E-value=2.8e-18  Score=120.59  Aligned_cols=115  Identities=18%  Similarity=0.220  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....      ......|+..|+|||.+.+..++.++|+||+|++++++++|..||......  .....
T Consensus       147 ~~kl~Dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~  218 (304)
T 2jam_A          147 KIMITDFGLSKMEQNG------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEK  218 (304)
T ss_dssp             CEEBCSCSTTCCCCCB------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH
T ss_pred             CEEEccCCcceecCCC------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHH
Confidence            4789999998764321      122346899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +....           .....+             ........+.+++.+||+.||++|||+.++++
T Consensus       219 i~~~~-----------~~~~~~-------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          219 IKEGY-----------YEFESP-------------FWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHCC-----------CCCCTT-------------TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHcCC-----------CCCCcc-------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11100           000000             00011234678999999999999999999986

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.72  E-value=6.5e-19  Score=126.50  Aligned_cols=113  Identities=19%  Similarity=0.217  Sum_probs=74.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+||+||+++++++|..||.+....  .....
T Consensus       162 ~ikL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~  235 (353)
T 3txo_A          162 HCKLADFGMCKEGICN----GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DLFEA  235 (353)
T ss_dssp             CEEECCCTTCBCSCC-------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEccccceeecccC----CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4799999999864322    12233457999999999988777899999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH------HHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI------SDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~------~~v~~  148 (163)
                      +           ......  .+.               .....+.+++.+||+.||.+||++      .++++
T Consensus       236 i-----------~~~~~~--~p~---------------~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          236 I-----------LNDEVV--YPT---------------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             H-----------HHCCCC--CCT---------------TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             H-----------HcCCCC--CCC---------------CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            1           111000  000               112335778999999999999998      67764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.72  E-value=2.6e-18  Score=119.47  Aligned_cols=123  Identities=15%  Similarity=0.221  Sum_probs=80.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|+..|+|||.+.+..++.++|+||||++++++++|..||......  .....
T Consensus       150 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~  222 (283)
T 3bhy_A          150 RIKLIDFGIAHKIEAGN-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLTN  222 (283)
T ss_dssp             CEEECCCTTCEECC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHH
T ss_pred             ceEEEecccceeccCCC-----cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHHH
Confidence            57999999998764321     112346889999999998888999999999999999999999999653211  00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH--HHHHhHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN--NLQKVKS  155 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~--~l~~~~~  155 (163)
                      +......     ...                   .........+.+++.+||+.||++|||+.++++  .+..+..
T Consensus       223 ~~~~~~~-----~~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          223 ISAVNYD-----FDE-------------------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             HHTTCCC-----CCH-------------------HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             hHhcccC-----Ccc-------------------hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence            0000000     000                   000112334678999999999999999999987  3555443

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.72  E-value=1.6e-18  Score=122.82  Aligned_cols=116  Identities=22%  Similarity=0.282  Sum_probs=76.1

Q ss_pred             ceeecccccccccCccccCC--------CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSN--------QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~--------~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+|||+++.........        ........|++.|+|||.+.+..++.++|+||+|++++++++|..|+.... 
T Consensus       202 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-  280 (332)
T 3qd2_B          202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-  280 (332)
T ss_dssp             CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-
T ss_pred             CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-
Confidence            47999999998775431110        112233568999999999988889999999999999999999876643210 


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                         .........               ..            ..........+.+++.+||+.||.+|||+.|+++
T Consensus       281 ---~~~~~~~~~---------------~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          281 ---RIITDVRNL---------------KF------------PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             ---HHHHHHHTT---------------CC------------CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             ---HHHHHhhcc---------------CC------------CcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence               000000000               00            0001122344577999999999999999999986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.72  E-value=2e-18  Score=124.33  Aligned_cols=121  Identities=9%  Similarity=-0.098  Sum_probs=83.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+....  ........+||..|+|||++.+..++.++|||||||+++++++|+.||...........  
T Consensus       221 ~~kl~DFG~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~--  296 (365)
T 3e7e_A          221 GLALIDLGQSIDMKLFP--KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE--  296 (365)
T ss_dssp             TEEECCCTTCEEGGGSC--TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC--
T ss_pred             CEEEeeCchhhhhhccC--CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec--
Confidence            58999999997653211  11222345789999999999888899999999999999999999999965322111100  


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCC-CCHHHHHHHHHHhHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRER-MDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R-ps~~~v~~~l~~~~~~~~  158 (163)
                                ..+..    .                  .....+.+++..|++.+|.+| |++.++.+.|+++.....
T Consensus       297 ----------~~~~~----~------------------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~  342 (365)
T 3e7e_A          297 ----------GLFRR----L------------------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY  342 (365)
T ss_dssp             ----------SCCTT----C------------------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             ----------hhccc----c------------------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence                      00000    0                  001234567788999999998 568888888888776643

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.72  E-value=2.1e-19  Score=125.34  Aligned_cols=117  Identities=15%  Similarity=0.223  Sum_probs=77.0

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      +||+|||+++.....        ....|+..|+|||.+.+ ..++.++||||||++++++++|..|+....... .....
T Consensus       160 ~kl~Dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~~~~  230 (289)
T 4fvq_A          160 IKLSDPGISITVLPK--------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RKLQF  230 (289)
T ss_dssp             EEECCCCSCTTTSCH--------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHH
T ss_pred             eeeccCcccccccCc--------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HHHHH
Confidence            899999998764321        12357888999999877 558899999999999999999654443211110 00000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ...          .......                   ....+.+++.+||+.||++|||+.++++.|+++...-
T Consensus       231 ~~~----------~~~~~~~-------------------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~  277 (289)
T 4fvq_A          231 YED----------RHQLPAP-------------------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD  277 (289)
T ss_dssp             HHT----------TCCCCCC-------------------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred             hhc----------cCCCCCC-------------------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            000          0000000                   0122567899999999999999999999999887643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.72  E-value=3e-18  Score=128.24  Aligned_cols=116  Identities=17%  Similarity=0.218  Sum_probs=78.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|++.|+|||++. ..++.++||||+||+++++++|..||.+....  .....
T Consensus       187 ~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~  258 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDY-----KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKK  258 (504)
T ss_dssp             SEEECCCTTCEECCTTS-----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             cEEEEECCCCEEcCCCC-----ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            58999999998764421     122356899999999876 46899999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +....           ....             ..........+.+|+.+||+.||.+|||++|+++.
T Consensus       259 i~~~~-----------~~~~-------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          259 VEKGK-----------YYFD-------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHHCC-----------CCCC-------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHcCC-----------CCCC-------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            11100           0000             00000112346789999999999999999999753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.71  E-value=1.2e-18  Score=122.90  Aligned_cols=137  Identities=15%  Similarity=0.151  Sum_probs=75.6

Q ss_pred             ceeecccccccccCccccC---CCcccccccccccccCCCCCCC-----CCCccccceehhhHHHHHHHhCCCCCccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMG-----SRVSTYGDVYSYGILLLETFTGKRPTSDIFA   73 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~g~~~y~~pe~~~~-----~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~   73 (163)
                      .+||+|||+++........   .........|+..|+|||++..     ..++.++||||+||+++++++|+.||.....
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  231 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG  231 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence            3899999998865422110   0111223458999999998864     3478899999999999999999999976433


Q ss_pred             cCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           74 EGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....+...  ...+................ .   .     ..........+.+|+.+||+.||++|||+.|+++.
T Consensus       232 ~~~~~~~~--~~~~~~~~~~~~~i~~~~~~-~---~-----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          232 SDCGWDRG--EACPACQNMLFESIQEGKYE-F---P-----DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             SCSCC------CCHHHHHHHHHHHHHCCCC-C---C-----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccccccc--ccchhHHHHHHHHHhccCcc-c---C-----chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            22111100  00000000000000000000 0   0     00000123456789999999999999999999873

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.71  E-value=3.5e-18  Score=123.18  Aligned_cols=116  Identities=16%  Similarity=0.228  Sum_probs=76.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC------CCCccccceehhhHHHHHHHhCCCCCccccccC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG------SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG   75 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~------~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~   75 (163)
                      .+||+|||++..+....     ......|++.|+|||++.+      ..++.++|+|||||+++++++|..||...... 
T Consensus       238 ~ikl~DfG~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-  311 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGE-----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-  311 (365)
T ss_dssp             CEEECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-
T ss_pred             CEEEEecCcccccCCCc-----ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-
Confidence            57999999998764321     1223578999999998742      34788999999999999999999999653111 


Q ss_pred             cchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           76 LDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                       .....+......    ...+.                    .......+.+++.+||+.||++|||+.++++
T Consensus       312 -~~~~~i~~~~~~----~~~~~--------------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          312 -LMLRMIMEGQYQ----FSSPE--------------------WDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             -HHHHHHHHTCCC----CCHHH--------------------HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -HHHHHHHhCCCC----CCCcc--------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             111111110000    00000                    0011234678999999999999999999986

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.71  E-value=3.7e-18  Score=120.94  Aligned_cols=110  Identities=22%  Similarity=0.309  Sum_probs=77.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....       ....+||+.|+|||++.+..++.++|+||+||+++++++|..||.+....  .... 
T Consensus       144 ~~kL~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~-  213 (318)
T 1fot_A          144 HIKITDFGFAKYVPDV-------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--KTYE-  213 (318)
T ss_dssp             CEEECCCSSCEECSSC-------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH-
T ss_pred             CEEEeecCcceecCCc-------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHH-
Confidence            4799999999875331       22357899999999998888999999999999999999999999653211  0111 


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~  148 (163)
                                ..+.....  .+.               .....+.+++.+||+.||++||     +++++++
T Consensus       214 ----------~i~~~~~~--~p~---------------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          214 ----------KILNAELR--FPP---------------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             ----------HHHHCCCC--CCT---------------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             ----------HHHhCCCC--CCC---------------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                      11111000  000               1123467889999999999999     8888875

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.71  E-value=2.9e-19  Score=124.05  Aligned_cols=116  Identities=21%  Similarity=0.234  Sum_probs=77.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||.+.+..++.++|+||||++++++++|..||......  .....
T Consensus       154 ~~kl~dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~  227 (279)
T 2w5a_A          154 NVKLGDFGLARILNHD----TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGK  227 (279)
T ss_dssp             CEEECCCCHHHHC-------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEecCchheeeccc----cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHH
Confidence            4799999999876432    11112346788999999998888899999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNL  150 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l  150 (163)
                      +..           .... ..+.               .....+.+++.+||+.||.+|||+.++++.+
T Consensus       228 i~~-----------~~~~-~~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          228 IRE-----------GKFR-RIPY---------------RYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             HHH-----------TCCC-CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             Hhh-----------cccc-cCCc---------------ccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            110           0000 0000               1123467899999999999999999998754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.71  E-value=2.3e-18  Score=121.42  Aligned_cols=116  Identities=22%  Similarity=0.318  Sum_probs=78.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++.......    .......|+..|+|||.+.+..++.++|+||||++++++++|..||.......  ....
T Consensus       163 ~~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~  236 (314)
T 3com_A          163 HAKLADFGVAGQLTDTM----AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFM  236 (314)
T ss_dssp             CEEECCCTTCEECBTTB----SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH
T ss_pred             CEEEeecccchhhhhhc----cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHH
Confidence            47999999998764321    11223468899999999988889999999999999999999999996532110  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +....        .+...  .+               ......+.+++.+||+.||.+|||+.++++
T Consensus       237 ~~~~~--------~~~~~--~~---------------~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          237 IPTNP--------PPTFR--KP---------------ELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHSC--------CCCCS--SG---------------GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HhcCC--------CcccC--Cc---------------ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            00000        00000  00               011234678999999999999999999976

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.71  E-value=9e-19  Score=128.82  Aligned_cols=68  Identities=24%  Similarity=0.272  Sum_probs=46.9

Q ss_pred             ceeecccccccccCccccCC------------------CcccccccccccccCCCCC-CCCCCccccceehhhHHHHHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSN------------------QSSSIGLKGTVGYAPPEYG-MGSRVSTYGDVYSYGILLLETF   62 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~------------------~~~~~~~~g~~~y~~pe~~-~~~~~~~~~di~s~g~~~~e~~   62 (163)
                      .+||+|||+++.........                  .......+||++|+|||++ ....++.++||||+||+++|++
T Consensus       167 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          167 SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             CEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             CEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence            58999999998764321110                  0122456789999999985 4456899999999999999999


Q ss_pred             hCCCCCc
Q 031224           63 TGKRPTS   69 (163)
Q Consensus        63 ~g~~p~~   69 (163)
                      +|..||.
T Consensus       247 ~g~~p~~  253 (432)
T 3n9x_A          247 NMLQSHI  253 (432)
T ss_dssp             TTCTTTC
T ss_pred             hcccccc
Confidence            8655553

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.71  E-value=4.7e-18  Score=118.02  Aligned_cols=112  Identities=22%  Similarity=0.286  Sum_probs=75.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++......      ......|+..|+|||.+.+..++.++|+||+|++++++++|..||.....     ...
T Consensus       147 ~~~l~Dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~  215 (279)
T 3fdn_A          147 ELKIADFGWSVHAPSS------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QET  215 (279)
T ss_dssp             CEEECSCCEESCC--------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH
T ss_pred             CEEEEeccccccCCcc------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHH
Confidence            4799999998654332      11234689999999999888889999999999999999999999964311     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....     .. ....    .+.               .....+.+|+.+||+.||.+|||+.++++.
T Consensus       216 ~~~~-----~~-~~~~----~~~---------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          216 YKRI-----SR-VEFT----FPD---------------FVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHH-----HH-TCCC----CCT---------------TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             HHHH-----Hh-CCCC----CCC---------------cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            1000     00 0000    000               112345679999999999999999999874

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.71  E-value=3.5e-18  Score=118.54  Aligned_cols=115  Identities=16%  Similarity=0.137  Sum_probs=77.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++..+....     ......|++.|+|||.+.+ .++.++|+||+|++++++++|+.||......  .....
T Consensus       147 ~~~l~Dfg~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~  218 (277)
T 3f3z_A          147 PLKLIDFGLAARFKPGK-----MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLK  218 (277)
T ss_dssp             CEEECCCTTCEECCTTS-----CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             cEEEEecccceeccCcc-----chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHH
Confidence            47999999998764321     1223468999999998765 4889999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +.......     .                   ..........+.+++.+||+.||.+|||+.++++
T Consensus       219 ~~~~~~~~-----~-------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          219 IREGTFTF-----P-------------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHCCCCC-----C-------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHhCCCCC-----C-------------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11000000     0                   0000012334678999999999999999999976

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.71  E-value=2.6e-18  Score=124.15  Aligned_cols=110  Identities=18%  Similarity=0.183  Sum_probs=75.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+||+||+++|+++|..||.+....  .....
T Consensus       177 ~ikL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~  250 (373)
T 2r5t_A          177 HIVLTDFGLCKENIEH----NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDN  250 (373)
T ss_dssp             CEEECCCCBCGGGBCC----CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--HHHHH
T ss_pred             CEEEeeCccccccccC----CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--HHHHH
Confidence            5799999999864322    11223467999999999998888999999999999999999999999653211  01111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISD  145 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  145 (163)
                                 .+....... +                .....+.+|+.+||+.||.+||++.+
T Consensus       251 -----------i~~~~~~~~-~----------------~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          251 -----------ILNKPLQLK-P----------------NITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             -----------HHHSCCCCC-S----------------SSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             -----------HHhcccCCC-C----------------CCCHHHHHHHHHHcccCHHhCCCCCC
Confidence                       111100000 0                11233577899999999999999853

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.71  E-value=4.5e-18  Score=122.12  Aligned_cols=113  Identities=18%  Similarity=0.239  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+||+||+++|+++|+.||.+....  .....
T Consensus       159 ~vkL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~  232 (353)
T 2i0e_A          159 HIKIADFGMCKENIWD----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQS  232 (353)
T ss_dssp             CEEECCCTTCBCCCCT----TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             cEEEEeCCcccccccC----CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--HHHHH
Confidence            5799999999864321    11223457999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~  148 (163)
                      +.           .....  .+.               .....+.+|+.+||+.||.+||+     ++++++
T Consensus       233 i~-----------~~~~~--~p~---------------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          233 IM-----------EHNVA--YPK---------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HH-----------HCCCC--CCT---------------TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             HH-----------hCCCC--CCC---------------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            11           11000  000               11234678999999999999996     466654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.71  E-value=1.3e-18  Score=129.47  Aligned_cols=115  Identities=20%  Similarity=0.226  Sum_probs=78.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...     .......|++.|+|||++.+ .++.++||||+||+++++++|..||.+....  .....
T Consensus       167 ~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~  238 (484)
T 3nyv_A          167 NIRIIDFGLSTHFEAS-----KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKK  238 (484)
T ss_dssp             CEEECCTTHHHHBCCC-----CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             cEEEEeeeeeEEcccc-----cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHH
Confidence            4799999999876432     12233568999999998865 6889999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +..           .......+             ........+.+|+.+||+.||.+|||+.++++
T Consensus       239 i~~-----------~~~~~~~~-------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          239 VEK-----------GKYTFELP-------------QWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHH-----------CCCCCCSG-------------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHc-----------CCCCCCCc-------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            111           00000000             00011234678999999999999999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.71  E-value=4.1e-18  Score=122.21  Aligned_cols=110  Identities=16%  Similarity=0.154  Sum_probs=77.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....       ....+||+.|+|||++.+..++.++|+||+||+++++++|..||.+....  .....
T Consensus       179 ~~kL~DFg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~  249 (350)
T 1rdq_E          179 YIQVTDFGFAKRVKGR-------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QIYEK  249 (350)
T ss_dssp             CEEECCCTTCEECSSC-------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEcccccceeccCC-------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--HHHHH
Confidence            4799999999876432       22357899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~  148 (163)
                      +           ......  .+.               .....+.+++.+||+.||.+||+     ++++++
T Consensus       250 i-----------~~~~~~--~p~---------------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          250 I-----------VSGKVR--FPS---------------HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             H-----------HHCCCC--CCT---------------TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             H-----------HcCCCC--CCC---------------CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            1           111000  000               11234678999999999999998     888865

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.71  E-value=3.9e-18  Score=118.35  Aligned_cols=113  Identities=19%  Similarity=0.250  Sum_probs=58.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++.......    .......|+..|+|||.+.+..++.++|+||+|++++++++|+.||.......     .
T Consensus       150 ~~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~  220 (278)
T 3cok_A          150 NIKIADFGLATQLKMPH----EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----T  220 (278)
T ss_dssp             CEEECCCTTCEECC--------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------
T ss_pred             CEEEEeecceeeccCCC----CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----H
Confidence            57999999998764321    11123468899999999988888999999999999999999999996532111     0


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....        ....  ..+.               .....+.+++.+||+.||++|||++++++
T Consensus       221 ~~~~~--------~~~~--~~~~---------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          221 LNKVV--------LADY--EMPS---------------FLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ---CC--------SSCC--CCCT---------------TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHh--------hccc--CCcc---------------ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            00000        0000  0000               11234578999999999999999999976

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.71  E-value=5.8e-18  Score=119.90  Aligned_cols=117  Identities=22%  Similarity=0.292  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC---CCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM---GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~---~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.....     .......|+..|+|||++.   ...++.++|+||||++++++++|..||....... .+
T Consensus       155 ~~kl~Dfg~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~  228 (322)
T 2ycf_A          155 LIKITDFGHSKILGET-----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SL  228 (322)
T ss_dssp             CEEECCCTTCEECCCC-----HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CH
T ss_pred             eEEEccCccceecccc-----cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HH
Confidence            4899999999876432     1112346899999999863   4568899999999999999999999996532221 12


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...+..........                        ........+.+++.+||+.||++|||+.++++
T Consensus       229 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          229 KDQITSGKYNFIPE------------------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHHHHTCCCCCHH------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHhCccccCch------------------------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            21111110000000                        00012345678999999999999999999985

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.70  E-value=2.1e-18  Score=123.49  Aligned_cols=112  Identities=22%  Similarity=0.379  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+||+||+++++++|..||.+....  .....
T Consensus       156 ~vkL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~  229 (345)
T 1xjd_A          156 HIKIADFGMCKENMLG----DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHS  229 (345)
T ss_dssp             CEEECCCTTCBCCCCT----TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEeEChhhhhcccC----CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHH
Confidence            4799999999864322    11223457999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH-HHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS-DVV  147 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~v~  147 (163)
                      +...         ...+    +.               .....+.+++.+||+.||++||++. +++
T Consensus       230 i~~~---------~~~~----p~---------------~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          230 IRMD---------NPFY----PR---------------WLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHC---------CCCC----CT---------------TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHhC---------CCCC----Cc---------------ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            1100         0000    00               1123467789999999999999987 664

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.70  E-value=5.1e-18  Score=130.85  Aligned_cols=113  Identities=18%  Similarity=0.256  Sum_probs=78.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+||+.|+|||++.+..++.++|+|||||+++|+++|+.||.+....  .....
T Consensus       480 ~ikL~DFGla~~~~~~----~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--~~~~~  553 (674)
T 3pfq_A          480 HIKIADFGMCKENIWD----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQS  553 (674)
T ss_dssp             CEEECCCTTCEECCCT----TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             cEEEeecceeeccccC----CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--HHHHH
Confidence            5899999999864322    12233467999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH-----HHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI-----SDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~v~~  148 (163)
                      +           +.....  .+.               .....+.+|+.+||+.||++|+++     ++|++
T Consensus       554 i-----------~~~~~~--~p~---------------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          554 I-----------MEHNVA--YPK---------------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             H-----------HSSCCC--CCT---------------TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             H-----------HhCCCC--CCc---------------cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            1           111000  000               112346789999999999999997     66654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.70  E-value=3.1e-18  Score=121.37  Aligned_cols=115  Identities=17%  Similarity=0.244  Sum_probs=70.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||++.......    .......|+..|+|||.+.     ...++.++|+||||++++++++|..||.+..... 
T Consensus       167 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-  241 (326)
T 2x7f_A          167 EVKLVDFGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-  241 (326)
T ss_dssp             CEEECCCTTTC-----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-
T ss_pred             CEEEeeCcCceecCcCc----cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-
Confidence            47999999998754321    1122346899999999886     4458899999999999999999999996532110 


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                       ....+...       . .+.....                  .....+.+++.+||+.||.+|||+.++++
T Consensus       242 -~~~~~~~~-------~-~~~~~~~------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          242 -ALFLIPRN-------P-APRLKSK------------------KWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             -HHHHHHHS-------C-CCCCSCS------------------CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -HHHHhhcC-------c-cccCCcc------------------ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence             00000000       0 0000000                  11234678999999999999999999987

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.70  E-value=7e-18  Score=119.88  Aligned_cols=113  Identities=19%  Similarity=0.190  Sum_probs=73.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    .......+|++.|+|||++.+..++.++|+||+|++++++++|+.||.+....  .....
T Consensus       159 ~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~  232 (327)
T 3a62_A          159 HVKLTDFGLCKESIHD----GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KTIDK  232 (327)
T ss_dssp             CEEECCCSCC--------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHH
T ss_pred             cEEEEeCCcccccccC----CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--HHHHH
Confidence            5799999999764322    11122356899999999998888999999999999999999999999653211  01111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~  148 (163)
                      +           ......  .+.               .....+.+++.+||+.||.+||     ++.++++
T Consensus       233 i-----------~~~~~~--~p~---------------~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          233 I-----------LKCKLN--LPP---------------YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             H-----------HHTCCC--CCT---------------TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             H-----------HhCCCC--CCC---------------CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            1           000000  000               1123467899999999999999     7777765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.70  E-value=1.8e-18  Score=124.29  Aligned_cols=64  Identities=27%  Similarity=0.448  Sum_probs=51.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.....      ......|+..|+|||++.+..++.++|+||||++++++++|+.||...
T Consensus       170 ~~kl~Dfg~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  233 (360)
T 3eqc_A          170 EIKLCDFGVSGQLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  233 (360)
T ss_dssp             CEEECCCCCCHHHHHH------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred             CEEEEECCCCcccccc------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            4799999998765321      112346899999999998888999999999999999999999999653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.69  E-value=3.6e-18  Score=129.08  Aligned_cols=117  Identities=23%  Similarity=0.326  Sum_probs=79.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+....     .....+||+.|+|||++.+..++.++|+||+||+++++++|..||....... ... .
T Consensus       324 ~vKL~DFGla~~~~~~~-----~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~-~  396 (576)
T 2acx_A          324 HIRISDLGLAVHVPEGQ-----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KRE-E  396 (576)
T ss_dssp             CEEECCCTTCEECCTTC-----CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHH-H
T ss_pred             CeEEEecccceecccCc-----cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHH-H
Confidence            58999999998764321     1223579999999999988889999999999999999999999997642211 101 0


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +......     ....+..                   .....+.+|+.+||+.||.+||     +++|++++
T Consensus       397 i~~~i~~-----~~~~~p~-------------------~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          397 VERLVKE-----VPEEYSE-------------------RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             HHHHHHH-----CCCCCCT-------------------TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             HHHHhhc-----ccccCCc-------------------cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            1000000     0000000                   1123467899999999999999     77888753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.69  E-value=1.7e-17  Score=114.98  Aligned_cols=113  Identities=22%  Similarity=0.316  Sum_probs=70.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||++.......     ......|+..|+|||.+.+..+ +.++|+||+|++++++++|..||......  ....
T Consensus       149 ~~~l~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~  221 (276)
T 2h6d_A          149 NAKIADFGLSNMMSDGE-----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFK  221 (276)
T ss_dssp             CEEECCCCGGGCCCC------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH
T ss_pred             CEEEeecccccccCCCc-----ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHH
Confidence            47999999998764321     1123468899999999887665 68899999999999999999999653111  0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+..           ... . .+.               .....+.+++.+||+.||++|||+.++++.
T Consensus       222 ~~~~-----------~~~-~-~~~---------------~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          222 KIRG-----------GVF-Y-IPE---------------YLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHH-----------CCC-C-CCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             Hhhc-----------Ccc-c-Cch---------------hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            1100           000 0 000               112346778999999999999999999874

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.69  E-value=1.6e-17  Score=115.67  Aligned_cols=111  Identities=19%  Similarity=0.230  Sum_probs=77.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||++......      ......|+..|+|||.+.+..++.++|+||+|++++++++|..||.......  ....
T Consensus       152 ~~kl~Dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~  223 (284)
T 2vgo_A          152 ELKIADFGWSVHAPSL------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--THRR  223 (284)
T ss_dssp             CEEECCCTTCEECSSS------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHH
T ss_pred             CEEEecccccccCccc------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--HHHH
Confidence            4799999998765321      1123468999999999988889999999999999999999999996532110  0000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +           .....  ..+.               .....+.+++.+||+.||.+|||++++++
T Consensus       224 ~-----------~~~~~--~~~~---------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          224 I-----------VNVDL--KFPP---------------FLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             H-----------HTTCC--CCCT---------------TSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             H-----------hcccc--CCCC---------------cCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            0           00000  0000               11234567999999999999999999986

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.69  E-value=1.1e-18  Score=124.90  Aligned_cols=137  Identities=20%  Similarity=0.207  Sum_probs=78.6

Q ss_pred             ceeecccccccccCccccCCC------cccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCcccccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQ------SSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAE   74 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~------~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~   74 (163)
                      .+||+|||+++..........      .......|+..|+|||++.. ..++.++|+||+||+++++++|+.||.+....
T Consensus       150 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  229 (353)
T 2b9h_A          150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR  229 (353)
T ss_dssp             CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence            579999999987653211100      11223468999999998654 56889999999999999999999999754221


Q ss_pred             CcchHHHHH--h-cC---------chhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC
Q 031224           75 GLDLHNFVK--N-AL---------PEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD  142 (163)
Q Consensus        75 ~~~~~~~~~--~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps  142 (163)
                      .. +.....  . ..         .....+.+...     +.......    ..........+.+|+.+||+.||++|||
T Consensus       230 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt  299 (353)
T 2b9h_A          230 HQ-LLLIFGIIGTPHSDNDLRCIESPRAREYIKSL-----PMYPAAPL----EKMFPRVNPKGIDLLQRMLVFDPAKRIT  299 (353)
T ss_dssp             HH-HHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTS-----CCCCCCCH----HHHSTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HH-HHHHHHHhCCCchhccccccccchhhHHhhcc-----cCCCCcch----hhhcccCCHHHHHHHHHhcCcCcccCCC
Confidence            10 000000  0 00         00000000000     00000000    0011122345678999999999999999


Q ss_pred             HHHHHH
Q 031224          143 ISDVVN  148 (163)
Q Consensus       143 ~~~v~~  148 (163)
                      +.++++
T Consensus       300 ~~ell~  305 (353)
T 2b9h_A          300 AKEALE  305 (353)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999986

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.69  E-value=6.6e-18  Score=119.17  Aligned_cols=117  Identities=20%  Similarity=0.249  Sum_probs=69.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||+++......     ......|+..|+|||.+.     ...++.++||||||++++++++|+.||........
T Consensus       163 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  237 (318)
T 2dyl_A          163 QIKLCDFGISGRLVDDK-----AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE  237 (318)
T ss_dssp             CEEECCCTTC-------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH
T ss_pred             CEEEEECCCchhccCCc-----cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH
Confidence            57999999997654321     112346889999999984     34578899999999999999999999965321110


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.......         .+.+....                 .....+.+++.+||+.||.+|||+.++++.
T Consensus       238 ~~~~~~~~~---------~~~~~~~~-----------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          238 VLTKVLQEE---------PPLLPGHM-----------------GFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             HHHHHHHSC---------CCCCCSSS-----------------CCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHHHhccC---------CCCCCccC-----------------CCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            111111000         00000000                 112346789999999999999999999763

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.69  E-value=1.3e-18  Score=122.81  Aligned_cols=139  Identities=16%  Similarity=0.199  Sum_probs=79.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ ........++..|+|||.+.. ..++.++|+||||++++++++|+.||.+.....  ...
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~  235 (320)
T 2i6l_A          159 VLKIGDFGLARIMDPHYSH-KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE--QMQ  235 (320)
T ss_dssp             EEEECCCTTCBCC---------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH
T ss_pred             eEEEccCccccccCCCccc-ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH--HHH
Confidence            5799999999876432111 112233457889999998765 568899999999999999999999997542211  111


Q ss_pred             HHHhcCc---h-hhhhh---hccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALP---E-QISEV---LDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~---~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+....+   . .....   +...+..........     ...........+.+++.+||+.||++|||++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKP-----LTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCC-----HHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHhcCCCchhhhhhhhhcCcccccccccCCCCC-----hhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            1111110   0 00000   000000000000000     00011122345788999999999999999999976

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.69  E-value=4.2e-18  Score=119.38  Aligned_cols=126  Identities=18%  Similarity=0.279  Sum_probs=74.7

Q ss_pred             ceeecccccccccCccccC-CCcccccccccccccCCCCCCC-CCCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRS-NQSSSIGLKGTVGYAPPEYGMG-SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~g~~~y~~pe~~~~-~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++........ .........|+..|+|||.+.+ ..++.++|+||||++++++++|..||.......  ..
T Consensus       159 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~  236 (303)
T 2vwi_A          159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--VL  236 (303)
T ss_dssp             CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HH
T ss_pred             CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--HH
Confidence            5799999999876432111 1111223468999999998765 457889999999999999999999996532211  11


Q ss_pred             HHHHhcCchhhhh-hhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           80 NFVKNALPEQISE-VLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ............. ..++....                   .....+.+++.+||+.||++|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          237 MLTLQNDPPSLETGVQDKEMLK-------------------KYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHHHTSSCCCTTC-----CCCC-------------------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHhccCCCccccccccchhhh-------------------hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            1110000000000 00000000                   11234678999999999999999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.68  E-value=4.9e-18  Score=120.27  Aligned_cols=106  Identities=22%  Similarity=0.354  Sum_probs=75.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....      ......|+..|+|||++.+..+ +.++|+||||++++++++|+.||.....       
T Consensus       188 ~~kL~Dfg~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------  254 (320)
T 3a99_A          188 ELKLIDFGSGALLKDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------  254 (320)
T ss_dssp             EEEECCCTTCEECCSS------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------
T ss_pred             CEEEeeCccccccccc------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------
Confidence            4799999999876432      1123468999999998876664 6788999999999999999999954210       


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ......          ....                   .....+.+++.+||+.||++|||++++++.
T Consensus       255 ~~~~~~----------~~~~-------------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          255 IIRGQV----------FFRQ-------------------RVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             HHHCCC----------CCSS-------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhcccc----------cccc-------------------cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000000          0000                   112346789999999999999999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.68  E-value=1.2e-17  Score=116.15  Aligned_cols=108  Identities=10%  Similarity=0.066  Sum_probs=73.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.+......        ....|+..|+|||.+.+. .++.++||||||++++++++|..++....    ....
T Consensus       172 ~~kl~Dfg~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~  239 (289)
T 1x8b_A          172 MFKIGDLGHVTRISSP--------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----QWHE  239 (289)
T ss_dssp             CEEECCCTTCEETTCS--------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----HHHH
T ss_pred             EEEEcccccccccCCc--------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----HHHH
Confidence            4799999999876432        123589999999998765 46789999999999999999887663311    0111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..            ...... .+.               .....+.+++.+||+.||++|||+.++++.
T Consensus       240 ~~------------~~~~~~-~~~---------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          240 IR------------QGRLPR-IPQ---------------VLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             HH------------TTCCCC-CSS---------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HH------------cCCCCC-CCc---------------ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            10            000000 000               112346789999999999999999999763

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.68  E-value=1e-17  Score=120.32  Aligned_cols=119  Identities=20%  Similarity=0.265  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC--CCccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS--RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~--~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++.+.....   .......|+..|+|||++.+.  .++.++|||||||+++++++|+.||....... ...
T Consensus       197 ~~kl~DfG~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~  272 (355)
T 1vzo_A          197 HVVLTDFGLSKEFVADET---ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQA  272 (355)
T ss_dssp             CEEESCSSEEEECCGGGG---GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHH
T ss_pred             cEEEeeCCCCeecccCCC---CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHH
Confidence            589999999987643211   112335689999999998753  37889999999999999999999996532211 111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      ......        .....  ..+               ......+.+|+.+||+.||.+||     |+.++++.
T Consensus       273 ~~~~~~--------~~~~~--~~~---------------~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          273 EISRRI--------LKSEP--PYP---------------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HHHHHH--------HHCCC--CCC---------------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHHHH--------hccCC--CCC---------------cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            111100        00000  000               01123456799999999999999     89998764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.68  E-value=8.8e-18  Score=117.47  Aligned_cols=114  Identities=20%  Similarity=0.234  Sum_probs=78.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........|+..|+|||.+.+..++.++|+||+|++++++++|+.||......     ..
T Consensus       153 ~~kl~dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~  223 (294)
T 2rku_A          153 EVKIGDFGLATKVEYD----GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ET  223 (294)
T ss_dssp             CEEECCCTTCEECCST----TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HH
T ss_pred             CEEEEeccCceecccC----ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HH
Confidence            5799999999876432    11122346889999999998888899999999999999999999999653211     11


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...        ......  ..+.               .....+.+++.+||+.||++|||++++++.
T Consensus       224 ~~~--------~~~~~~--~~~~---------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          224 YLR--------IKKNEY--SIPK---------------HINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             HHH--------HHTTCC--CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHH--------HhhccC--CCcc---------------ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            000        000000  0000               112346678999999999999999999863

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.68  E-value=9.8e-18  Score=126.19  Aligned_cols=117  Identities=17%  Similarity=0.273  Sum_probs=78.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+....    ......+||+.|+|||++.+..++.++|+||+||+++|+++|+.||....... .....
T Consensus       327 ~vkL~DFGla~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~  401 (543)
T 3c4z_A          327 NVRISDLGLAVELKAGQ----TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKEL  401 (543)
T ss_dssp             CEEECCCTTCEECCTTC----CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHH
T ss_pred             CEEEeecceeeeccCCC----cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHH
Confidence            57999999998764321    11223579999999999988889999999999999999999999997642211 11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCH-----HHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDI-----SDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~v~~  148 (163)
                      ..        ........  .+.               .....+.+|+.+||+.||.+||++     +++++
T Consensus       402 ~~--------~i~~~~~~--~p~---------------~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          402 KQ--------RVLEQAVT--YPD---------------KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             HH--------HHHHCCCC--CCT---------------TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             HH--------HHhhcccC--CCc---------------ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            10        00111000  000               112345778999999999999975     66653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.68  E-value=7.3e-18  Score=120.11  Aligned_cols=113  Identities=20%  Similarity=0.217  Sum_probs=78.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......    .......|+..|++||.+.+..++.++|+||||++++++++|+.||.....     ...
T Consensus       179 ~~kl~Dfg~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~  249 (335)
T 2owb_A          179 EVKIGDFGLATKVEYDG----ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KET  249 (335)
T ss_dssp             CEEECCCTTCEECCSTT----CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH
T ss_pred             CEEEeeccCceecccCc----ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----HHH
Confidence            57999999998764321    112234689999999999888889999999999999999999999965321     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...        ......  ..+.               .....+.+|+.+||+.||++|||++++++
T Consensus       250 ~~~--------~~~~~~--~~~~---------------~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          250 YLR--------IKKNEY--SIPK---------------HINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHH--------HHHTCC--CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHH--------HhcCCC--CCCc---------------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            100        000000  0000               11223567899999999999999999986

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.68  E-value=1.4e-17  Score=116.09  Aligned_cols=115  Identities=19%  Similarity=0.192  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|+..|+|||.+.+ .++.++|+||+|++++++++|..||.+....  .....
T Consensus       162 ~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~  233 (287)
T 2wei_A          162 DIKIIDFGLSTCFQQNT-----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKR  233 (287)
T ss_dssp             CEEECSTTGGGTBCCCS-----SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             cEEEeccCcceeecCCC-----ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            48999999998764321     1123457889999998765 4889999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +..           .......+             ........+.+++.+||+.||++|||+.++++
T Consensus       234 ~~~-----------~~~~~~~~-------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          234 VET-----------GKYAFDLP-------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHH-----------CCCCCCSG-------------GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHc-----------CCCCCCch-------------hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            100           00000000             00011234678999999999999999999987

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.67  E-value=4.9e-17  Score=114.15  Aligned_cols=116  Identities=16%  Similarity=0.205  Sum_probs=76.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC--CccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR--VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~--~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||++........  ........|+..|+|||++.+..  ++.++|+||+|++++++++|..||.+....  ...
T Consensus       147 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~  222 (305)
T 2wtk_C          147 TLKISALGVAEALHPFAA--DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLF  222 (305)
T ss_dssp             CEEECCCTTCEECCTTCS--SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHH
T ss_pred             cEEeeccccccccCcccc--ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHH
Confidence            479999999987643211  11222346899999999987644  467899999999999999999999653110  011


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+..           ....  .+.               .....+.+++.+||+.||.+|||++++++.
T Consensus       223 ~~i~~-----------~~~~--~~~---------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          223 ENIGK-----------GSYA--IPG---------------DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHHH-----------CCCC--CCS---------------SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHhc-----------CCCC--CCC---------------ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11100           0000  000               112346689999999999999999999864

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.67  E-value=3.6e-18  Score=119.76  Aligned_cols=116  Identities=15%  Similarity=0.185  Sum_probs=73.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCC-----CCCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYG-----MGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~-----~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||++.......    .......|+..|+|||.+     ....++.++|+||||++++++++|..||....... 
T Consensus       155 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-  229 (302)
T 2j7t_A          155 DIRLADFGVSAKNLKTL----QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-  229 (302)
T ss_dssp             CEEECCCHHHHHHHHHH----HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-
T ss_pred             CEEEEECCCCccccccc----cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-
Confidence            47899999876432211    111234688999999987     35568899999999999999999999996532110 


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                       ....+....        .+...  .+               ......+.+++.+||+.||++|||+.++++
T Consensus       230 -~~~~~~~~~--------~~~~~--~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          230 -VLLKIAKSD--------PPTLL--TP---------------SKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             -HHHHHHHSC--------CCCCS--SG---------------GGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             -HHHHHhccC--------CcccC--Cc---------------cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence             000000000        00000  00               011234678999999999999999999976

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.66  E-value=3.7e-17  Score=116.78  Aligned_cols=132  Identities=19%  Similarity=0.227  Sum_probs=79.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCcc-ccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVST-YGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~-~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++.....      ......|+..|+|||.+.+. .++. ++|+||+|++++++++|..||...... ....
T Consensus       190 ~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~  262 (348)
T 2pml_X          190 RVKLSDFGESEYMVDK------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELF  262 (348)
T ss_dssp             CEEECCCTTCEECBTT------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHH
T ss_pred             cEEEeccccccccccc------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHH
Confidence            5799999999875432      12234689999999999877 5665 899999999999999999999653221 1111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..+...... ..............        .............+.+|+.+||+.||.+|||+.++++.
T Consensus       263 ~~i~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          263 NNIRTKNIE-YPLDRNHFLYPLTN--------KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             HHHTSCCCC-CCCSSSSSTTTTCC----------------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHhccCcC-Cccchhhhhccccc--------cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            111111000 00000000000000        00000001223456789999999999999999999863

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.66  E-value=2.5e-17  Score=120.32  Aligned_cols=119  Identities=16%  Similarity=0.129  Sum_probs=77.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC----CccccceehhhHHHHHHHhCCCCCccccccCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR----VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLD   77 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~----~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~   77 (163)
                      .+||+|||+++.+....   .......+||+.|+|||++.+..    ++.++|+|||||+++++++|+.||.+....  .
T Consensus       206 ~ikL~DFG~a~~~~~~~---~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~  280 (410)
T 3v8s_A          206 HLKLADFGTCMKMNKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--G  280 (410)
T ss_dssp             CEEECCCTTCEECCTTS---EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--H
T ss_pred             CEEEeccceeEeeccCC---cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--h
Confidence            58999999998764321   11123457999999999987654    788999999999999999999999653211  1


Q ss_pred             hHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCC--CCCHHHHHHH
Q 031224           78 LHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRE--RMDISDVVNN  149 (163)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~v~~~  149 (163)
                      ....+..   ....        ...+...             .....+.+|+.+||..+|.+  |++++|++++
T Consensus       281 ~~~~i~~---~~~~--------~~~p~~~-------------~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          281 TYSKIMN---HKNS--------LTFPDDN-------------DISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HHHHHHT---HHHH--------CCCCTTC-------------CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             HHHHHHh---cccc--------ccCCCcc-------------cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            1111100   0000        0000000             11234577889999988888  9999999763

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.66  E-value=3e-17  Score=114.88  Aligned_cols=116  Identities=16%  Similarity=0.212  Sum_probs=76.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC------CCCCccccceehhhHHHHHHHhCCCCCccccccC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM------GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG   75 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~------~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~   75 (163)
                      .+||+|||++.......     ......|+..|+|||++.      ...++.++|+||||++++++++|..||...... 
T Consensus       162 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-  235 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPGE-----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-  235 (298)
T ss_dssp             CEEECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-
T ss_pred             cEEEecccchhhcCCCc-----ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-
Confidence            57999999998764321     122346899999999874      345788999999999999999999999653211 


Q ss_pred             cchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           76 LDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                       .....+..           .......+.             .......+.+++.+||+.||.+|||+.++++
T Consensus       236 -~~~~~~~~-----------~~~~~~~~~-------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          236 -LMLRMIMS-----------GNYQFGSPE-------------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             -HHHHHHHH-----------TCCCCCTTT-------------GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             -HHHHHHhc-----------CCcccCccc-------------ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence             11111100           000000000             0012334678999999999999999999975

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.65  E-value=5.5e-17  Score=119.41  Aligned_cols=120  Identities=16%  Similarity=0.097  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||+++......   .......+||+.|+|||++.     ...++.++|+|||||+++|+++|+.||.+..... 
T Consensus       213 ~vkL~DFGla~~~~~~~---~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-  288 (437)
T 4aw2_A          213 HIRLADFGSCLKLMEDG---TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-  288 (437)
T ss_dssp             CEEECCCTTCEECCTTS---CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-
T ss_pred             CEEEcchhhhhhcccCC---CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-
Confidence            58999999998764321   11123357999999999986     4568899999999999999999999996532111 


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCC--CCCHHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRE--RMDISDVVNN  149 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~v~~~  149 (163)
                       ....+.   .....-.+....    .                .....+.+|+.+||..+|+.  |++++|+++.
T Consensus       289 -~~~~i~---~~~~~~~~p~~~----~----------------~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          289 -TYGKIM---NHKERFQFPTQV----T----------------DVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             -HHHHHH---THHHHCCCCSSC----C----------------CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             -HHHhhh---hccccccCCccc----c----------------cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence             111110   000000000000    0                11233567888999888887  9999998763

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.65  E-value=1.6e-16  Score=121.67  Aligned_cols=134  Identities=14%  Similarity=0.091  Sum_probs=76.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     ......|+..|+|||.+.+..++.++|+||+|++++++++|..||......    ..+
T Consensus       162 ~vKL~DFG~a~~~~~~~-----~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~  232 (676)
T 3qa8_A          162 IHKIIDLGYAKELDQGE-----LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQW  232 (676)
T ss_dssp             EEEECSCCCCCBTTSCC-----CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHS
T ss_pred             eEEEccccccccccccc-----ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhh
Confidence            47999999998764421     122356899999999998888999999999999999999999999653110    000


Q ss_pred             HHhcCchhhh-hhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHH
Q 031224           82 VKNALPEQIS-EVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVV  147 (163)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~  147 (163)
                      .......... ...................+.   .........+.+++.+||..||++|||+++++
T Consensus       233 ~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~---~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          233 HGKVREKSNEHIVVYDDLTGAVKFSSVLPTPN---HLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             STTCC------CCSCCCCSSSCCCCSSSCCSC---CCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             hhhhhcccchhhhhhhhhccccccccccCCch---hhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence            0000000000 000000000000000000000   00112345578899999999999999998854

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.64  E-value=6e-17  Score=114.11  Aligned_cols=105  Identities=22%  Similarity=0.341  Sum_probs=74.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......      .....|+..|+|||++.+..+ +.++|+||+|++++++++|+.||.....       
T Consensus       178 ~~kl~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------  244 (312)
T 2iwi_A          178 CAKLIDFGSGALLHDEP------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------  244 (312)
T ss_dssp             EEEECCCSSCEECCSSC------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------
T ss_pred             eEEEEEcchhhhcccCc------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------
Confidence            47999999998764321      123468999999998876665 4589999999999999999999964210       


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ......          .+..                   .....+.+++.+||+.||++|||++++++
T Consensus       245 ~~~~~~----------~~~~-------------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          245 ILEAEL----------HFPA-------------------HVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHHTCC----------CCCT-------------------TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             Hhhhcc----------CCcc-------------------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000000          0000                   11234577999999999999999999987

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.64  E-value=2.5e-17  Score=120.45  Aligned_cols=67  Identities=22%  Similarity=0.265  Sum_probs=52.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-------CCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-------GSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-------~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+++.......   ......+||+.|+|||++.       ...++.++|+|||||+++|+++|+.||...
T Consensus       200 ~vkL~DFGla~~~~~~~~---~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~  273 (412)
T 2vd5_A          200 HIRLADFGSCLKLRADGT---VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD  273 (412)
T ss_dssp             CEEECCCTTCEECCTTSC---EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CEEEeechhheeccCCCc---cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence            589999999987643211   1122357999999999886       345889999999999999999999999653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.60  E-value=2.4e-16  Score=110.22  Aligned_cols=120  Identities=20%  Similarity=0.278  Sum_probs=68.8

Q ss_pred             ceeecccccccccCccccC----------CCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRS----------NQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++........          .........|+..|+|||.+.+. .++.++|+||+|++++++++   ||..
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            4799999999876432100          01112334688999999998764 58899999999999999997   4432


Q ss_pred             ccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           71 IFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ..... .....+...         ...+.....               ......+.+++.+||+.||.+|||+.++++.
T Consensus       231 ~~~~~-~~~~~~~~~---------~~~~~~~~~---------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          231 GMERV-NILKKLRSV---------SIEFPPDFD---------------DNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHH-HHHHHHHST---------TCCCCTTCC---------------TTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             chhHH-HHHHhcccc---------ccccCcccc---------------ccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            11100 000000000         000000000               0122345789999999999999999999874

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.58  E-value=1.5e-15  Score=117.32  Aligned_cols=112  Identities=21%  Similarity=0.264  Sum_probs=79.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....        ....||+.|++||++.+. ++.++|||||||+++++++|..||.+......     
T Consensus       219 ~~kl~DFG~a~~~~~~--------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----  284 (681)
T 2pzi_A          219 QLKLIDLGAVSRINSF--------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL-----  284 (681)
T ss_dssp             CEEECCCTTCEETTCC--------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC-----
T ss_pred             cEEEEecccchhcccC--------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc-----
Confidence            4799999999876432        234689999999987654 47889999999999999999887754221110     


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-HHHHHHHHHHhHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-ISDVVNNLQKVKSTLL  158 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-~~~v~~~l~~~~~~~~  158 (163)
                           +.            ..              ........+.+|+.+||+.||.+||+ ++++.+.|..+..+..
T Consensus       285 -----~~------------~~--------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~  331 (681)
T 2pzi_A          285 -----PE------------DD--------------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVV  331 (681)
T ss_dssp             -----CT------------TC--------------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHHH
T ss_pred             -----cc------------cc--------------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHhh
Confidence                 00            00              00012244678999999999999995 7777788887776554

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.44  E-value=2e-14  Score=100.78  Aligned_cols=84  Identities=15%  Similarity=0.222  Sum_probs=50.0

Q ss_pred             CCccccceehhhHHHHHHHhCCCCCccccccCcchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHH
Q 031224           44 RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLA  123 (163)
Q Consensus        44 ~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (163)
                      .++.++|+||+||+++++++|..||.........      .....        .+......   ..     .........
T Consensus       174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------~~~~~--------~~~~~~~~---~~-----~~~~~~~~~  231 (299)
T 3m2w_A          174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------PGMKT--------RIRMGQYE---FP-----NPEWSEVSE  231 (299)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCSCC--------SSCTTCCS---SC-----HHHHTTSCH
T ss_pred             cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------HHHHH--------HHhhcccc---CC-----chhcccCCH
Confidence            4678899999999999999999999653221100      00000        00000000   00     000011234


Q ss_pred             HHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224          124 TILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus       124 ~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .+.+++.+||+.||.+|||+.++++.
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcC
Confidence            56789999999999999999999863

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.23  E-value=1.2e-12  Score=93.06  Aligned_cols=59  Identities=14%  Similarity=0.038  Sum_probs=47.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHH-HHHHHhCCCCCcc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL-LLETFTGKRPTSD   70 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~-~~e~~~g~~p~~~   70 (163)
                      .+||+|||+++.....         ..+||+.|+|||++.+.. +.++||||+++. ..+++.|..||.+
T Consensus       220 ~vkL~DFG~a~~~~~~---------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~  279 (336)
T 2vuw_A          220 QVSIIDYTLSRLERDG---------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN  279 (336)
T ss_dssp             EEEECCCTTCBEEETT---------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred             eEEEeeccccEecCCC---------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence            6899999999875321         246899999999988666 889999998776 5677888888843

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.20  E-value=2.8e-12  Score=89.47  Aligned_cols=88  Identities=10%  Similarity=0.031  Sum_probs=56.6

Q ss_pred             CCccccceehhhHHHHHHHhCCCCCccccccCcchH--HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHH
Q 031224           44 RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH--NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQES  121 (163)
Q Consensus        44 ~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (163)
                      .++.++|||||||+++++++|+.||.+.........  ....... ... ..+                       ....
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~-~~~-----------------------~~~~  232 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP-IEP-ADI-----------------------DRDI  232 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCB-CCH-HHH-----------------------CTTS
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCC-CCh-hhc-----------------------ccCC
Confidence            368899999999999999999999976432210000  0000000 000 000                       0022


Q ss_pred             HHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224          122 LATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus       122 ~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      ...+.+++.+||+.||++| |+.++++.|..+....
T Consensus       233 ~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          233 PFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence            3346789999999999999 9999999999876543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.19  E-value=3.9e-08  Score=74.71  Aligned_cols=58  Identities=19%  Similarity=-0.035  Sum_probs=29.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG   64 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g   64 (163)
                      .+||+|||+++......    ......+||+.|++||++.+ .+...+|+|++|++.+++.++
T Consensus       377 ~vKL~DFGlAr~~~~~~----~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          377 HARLIDFGSIVTTPQDC----SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             CEEECCCTTEESCC-------CCSHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred             CEEEeecccCeeCCCCC----ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccc
Confidence            58999999998765432    22334679999999999865 456778999999987665443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.35  E-value=2.8e-06  Score=64.19  Aligned_cols=67  Identities=12%  Similarity=-0.025  Sum_probs=47.8

Q ss_pred             ceeecccccccccCccccCCC---cccccccccccccCCCCCCC--CCCccccceehhhHHHHHHHhCCCCC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQ---SSSIGLKGTVGYAPPEYGMG--SRVSTYGDVYSYGILLLETFTGKRPT   68 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~---~~~~~~~g~~~y~~pe~~~~--~~~~~~~di~s~g~~~~e~~~g~~p~   68 (163)
                      .+||+|||+++..........   .......||+.|+|||++..  ..|+...|+|+..+-..+.+.++.+|
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            479999999998754211000   01234678999999999866  45778889999888888877776665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	163
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-18
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-16
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-14
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-14
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-14
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-13
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-13
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-13
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-12
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-12
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-12
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-11
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	9e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-09
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	7e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-08
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-08
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-07
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-04
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-04
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.001

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 1e-18
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 29/160 (18%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG---DVYSYGIL 57
           +T  +GDFGL         S+Q   +   G++ +  PE       + Y    DVY++GI+
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 198

Query: 58  LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQ 117
           L E  TG+ P S+I      +    +  L   +S+V                     +  
Sbjct: 199 LYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV---------------------RSN 237

Query: 118 VQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL 157
             +++  ++     C  +   ER     ++ +++ +  +L
Sbjct: 238 CPKAMKRLMA---ECLKKKRDERPLFPQILASIELLARSL 274

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 3e-16
 Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 28/159 (17%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            T  V DFGL R + +    +  +  G K  V +   E     + +T  DV+S+G+LL E
Sbjct: 167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 226

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
             T   P        ++  +     L  Q   +L P +                      
Sbjct: 227 LMTRGAP----PYPDVNTFDITVYLL--QGRRLLQPEYCP-------------------- 260

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
               + ++ + C       R   S++V+ +  + ST + 
Sbjct: 261 --DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 297

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 2e-14
 Identities = 25/152 (16%), Positives = 57/152 (37%), Gaps = 29/152 (19%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL+R + +   +  ++S G K  + +  PE     + ++  DV+S+GI++ E
Sbjct: 147 LVCKVSDFGLSRVLEDDPEATYTTS-GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWE 205

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
             T                         ++ + ++               +  +     +
Sbjct: 206 VMTYGER-------------PYWELSNHEVMKAIN---------------DGFRLPTPMD 237

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQK 152
             + I ++ + C  +    R   +D+V+ L K
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDK 269

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 3e-14
 Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 31/153 (20%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               V DFGL+R++ +      +SS+G K  V ++PPE  M S+ S+  D++++G+L+ E
Sbjct: 137 GVVKVSDFGLSRYVLD---DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
            ++  +   + F    +    +   L      +                           
Sbjct: 194 IYSLGKMPYERFTNS-ETAEHIAQGLRLYRPHLASE------------------------ 228

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQKV 153
               +  I  +C  E   ER     +++N+  V
Sbjct: 229 ---KVYTIMYSCWHEKADERPTFKILLSNILDV 258

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 4e-14
 Identities = 27/162 (16%), Positives = 49/162 (30%), Gaps = 18/162 (11%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG------DVYSY 54
            T  + D GL      A  +   +     GT  Y  PE    S    +       D+Y+ 
Sbjct: 145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 204

Query: 55  GILLLETFTGKRPTSDIFAEGLDLHNFVKN--ALPEQISEVLDPLFVTGGEEGEGTAEEK 112
           G++  E               L  ++ V +  ++ E    V +                 
Sbjct: 205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL----------RPNI 254

Query: 113 LKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK 154
             + Q  E+L  + KI   C   +   R+    +   L ++ 
Sbjct: 255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 5e-14
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 31/156 (19%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               V DFG+TRF+ +      +SS G K  V +A PE    SR S+  DV+S+G+L+ E
Sbjct: 138 QVIKVSDFGMTRFVLD---DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 194

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
            F+  +   +  +   ++   +          +                           
Sbjct: 195 VFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLAST------------------------ 229

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQKVKST 156
               + +I   C  E P +R   S ++  L ++  +
Sbjct: 230 ---HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 5e-13
 Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 31/152 (20%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +   V DFGL R I +   +  ++  G K  + +  PE  +  R +   DV+S+GILL E
Sbjct: 150 LVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 206

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
             T  R           L    +        E  + L                       
Sbjct: 207 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL----------------------- 243

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQK 152
                  +   C  + P ER     +   L+ 
Sbjct: 244 -----HDLMCQCWRKEPEERPTFEYLQAFLED 270

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 7e-13
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFG++  + +++ ++        GT  Y  PE   G+  S   D++S G+ L+E
Sbjct: 142 GEIKLCDFGVSGQLIDSMANSF------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195

Query: 61  TFTGKRP 67
              G+ P
Sbjct: 196 MAVGRYP 202

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.2 bits (150), Expect = 8e-13
 Identities = 27/152 (17%), Positives = 47/152 (30%), Gaps = 30/152 (19%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           M   + DFGL+R I  A       +      + + PPE    +R +T  DV++YG++L E
Sbjct: 177 MVVKIADFGLSRNIYSADYYKADGNDA--IPIRWMPPESIFYNRYTTESDVWAYGVVLWE 234

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
            F+         A    ++      +          L                       
Sbjct: 235 IFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLEL----------------------- 271

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQK 152
                  +   C  + P +R     +   LQ+
Sbjct: 272 -----YNLMRLCWSKLPADRPSFCSIHRILQR 298

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.5 bits (151), Expect = 8e-13
 Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 31/155 (20%)

Query: 1   MTAHVGDFGLTRFI-PEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLL 59
           +   V DFGL+RF+  +      +S++G K  + +  PE     + ++  DV+SYGI++ 
Sbjct: 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 224

Query: 60  ETFT-GKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQV 118
           E  + G+RP  D+  + + ++   ++       +    L                     
Sbjct: 225 EVMSYGERPYWDMTNQDV-INAIEQDYRLPPPMDCPSAL--------------------- 262

Query: 119 QESLATILKIGVACSVESPRERMDISDVVNNLQKV 153
                   ++ + C  +    R     +VN L K+
Sbjct: 263 -------HQLMLDCWQKDRNHRPKFGQIVNTLDKM 290

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 2e-12
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 7/96 (7%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            +  +GD GL            S +  + GT  +  PE     +     DVY++G+ +LE
Sbjct: 152 GSVKIGDLGLATL------KRASFAKAVIGTPEFMAPEM-YEEKYDESVDVYAFGMCMLE 204

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDP 96
             T + P S+                P    +V  P
Sbjct: 205 MATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP 240

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 4e-12
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 7/98 (7%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFG +   P       S    L GT+ Y PPE   G       D++S G+L  E
Sbjct: 143 GELKIADFGWSVHAPS------SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 196

Query: 61  TFTGKRP-TSDIFAEGLDLHNFVKNALPEQISEVLDPL 97
              GK P  ++ + E     + V+   P+ ++E    L
Sbjct: 197 FLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 234

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 6e-12
 Identities = 27/152 (17%), Positives = 49/152 (32%), Gaps = 31/152 (20%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           ++  + DFGL R I +   +  ++  G K  + +  PE       +   DV+S+GILL E
Sbjct: 146 LSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
             T  R           + N  +     +     + L                       
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------------- 239

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQK 152
                 ++   C  E P +R     + + L+ 
Sbjct: 240 -----YQLMRLCWKERPEDRPTFDYLRSVLED 266

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 9e-12
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 31/160 (19%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
             A + DFGL++ +        + S G K  + +  PE     + S+  DV+SYG+ + E
Sbjct: 146 HYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 204

Query: 61  TFT-GKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQ 119
             + G++P   +  +G ++  F++     +      P                       
Sbjct: 205 ALSYGQKPYKKM--KGPEVMAFIEQGKRMECPPECPP----------------------- 239

Query: 120 ESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLR 159
             L  ++     C +    +R D   V   ++    +L  
Sbjct: 240 -ELYALMS---DCWIYKWEDRPDFLTVEQRMRACYYSLAS 275

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 2e-11
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 6/96 (6%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               +GDFGL R +      + S +    GT  Y  PE       +   D++S G LL E
Sbjct: 151 QNVKLGDFGLARILNH----DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 206

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDP 96
                 P +       +L   ++     +I      
Sbjct: 207 LCALMPPFTAF--SQKELAGKIREGKFRRIPYRYSD 240

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 4e-11
 Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
             A + DFGL++ +     +   +    K  V +  PE     + S+  DV+S+G+L+ E
Sbjct: 144 HYAKISDFGLSKALRA-DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202

Query: 61  TFT-GKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQ 119
            F+ G++P   +  +G ++   ++                                    
Sbjct: 203 AFSYGQKPYRGM--KGSEVTAMLEKGERMGCPAGCPR----------------------- 237

Query: 120 ESLATILKIGVACSVESPRERMDISDVVNNLQ 151
             +  ++     C       R   + V   L+
Sbjct: 238 -EMYDLMN---LCWTYDVENRPGFAAVELRLR 265

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 6e-11
 Identities = 27/151 (17%), Positives = 42/151 (27%), Gaps = 29/151 (19%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFGL R I     SN       +  V +  PE       +   DV+SYGILL E
Sbjct: 201 KVVKICDFGLARDIMS--DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE 258

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
            F+             + +  ++N                                    
Sbjct: 259 IFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIY--------------------- 297

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQ 151
                  I  +C     R+R    ++ + L 
Sbjct: 298 ------IIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 8e-11
 Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 32/155 (20%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFGL + +       +  + G K  + +   E  +    +   DV+SYG+ + E
Sbjct: 148 QHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 205

Query: 61  TFT-GKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQ 119
             T G +P   I A   ++ + ++         +                          
Sbjct: 206 LMTFGSKPYDGIPAS--EISSILEKGERLPQPPICTI----------------------- 240

Query: 120 ESLATILKIGVACSVESPRERMDISDVVNNLQKVK 154
                +  I V C +     R    +++    K+ 
Sbjct: 241 ----DVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 2e-10
 Identities = 31/155 (20%), Positives = 52/155 (33%), Gaps = 35/155 (22%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
             A V DFGLT+          S+    K  V +  PE     + ST  DV+S+GILL E
Sbjct: 140 NVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 192

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
            ++  R         + L + V      ++ +                       D    
Sbjct: 193 IYSFGRV----PYPRIPLKDVV-----PRVEKGYKMDAP----------------DGCPP 227

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQKVKS 155
           ++  ++K    C       R     +   L+ +K+
Sbjct: 228 AVYEVMK---NCWHLDAAMRPSFLQLREQLEHIKT 259

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 3e-10
 Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 30/152 (19%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            T  +GDFG+TR I E     +         V +  PE       +TY DV+S+G++L E
Sbjct: 170 FTVKIGDFGMTRDIYETDYYRKGGKG--LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 227

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
             T         +    L   ++  L ++     D LF                      
Sbjct: 228 IATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF---------------------- 265

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQK 152
                 ++   C   +P+ R    ++++++++
Sbjct: 266 ------ELMRMCWQYNPKMRPSFLEIISSIKE 291

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.5 bits (128), Expect = 9e-10
 Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 12/101 (11%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG---DVYSYGIL 57
               +GDFG    +  A            GT  +  PE  +      Y    DV+S GI 
Sbjct: 152 GLVKLGDFGSASIMAPANS--------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203

Query: 58  LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLF 98
            +E    K P  ++ A    L++  +N  P   S      F
Sbjct: 204 CIELAERKPPLFNMNAMSA-LYHIAQNESPALQSGHWSEYF 243

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 1e-09
 Identities = 29/155 (18%), Positives = 45/155 (29%), Gaps = 30/155 (19%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               +GDFGL R +P+            K    +  PE       S   D + +G+ L E
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQE-HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206

Query: 61  TFT-GKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQ 119
            FT G+ P   +    + LH   K        E                           
Sbjct: 207 MFTYGQEPWIGLNGSQI-LHKIDKEGERLPRPEDCPQ----------------------- 242

Query: 120 ESLATILKIGVACSVESPRERMDISDVVNNLQKVK 154
                I  + V C    P +R     + + L + +
Sbjct: 243 ----DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 28/152 (18%), Positives = 41/152 (26%), Gaps = 29/152 (19%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFGL R I     SN       +  V +  PE       +   DV+SYGI L E
Sbjct: 182 RITKICDFGLARDIKND--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
            F+               +  +K        E                            
Sbjct: 240 LFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPA------------------------ 275

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQK 152
               +  I   C    P +R     +V  ++K
Sbjct: 276 ---EMYDIMKTCWDADPLKRPTFKQIVQLIEK 304

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 25/153 (16%), Positives = 54/153 (35%), Gaps = 31/153 (20%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               V DFGL+R +        ++  G K  + +  PE    ++ S   DV+++G+LL E
Sbjct: 152 HLVKVADFGLSRLMTG---DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 208

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
             T                         Q+ E+L+                  + ++ + 
Sbjct: 209 IATYGMS-------------PYPGIDLSQVYELLEK---------------DYRMERPEG 240

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQKV 153
               + ++  AC   +P +R   +++    + +
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 33/153 (21%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
             A + DFGL+R     ++         +  V +   E    S  +T  DV+SYG+LL E
Sbjct: 164 YVAKIADFGLSRGQEVYVKKTMG-----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 218

Query: 61  TFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQE 120
             +                   +    E+     D +                       
Sbjct: 219 IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEV----------------------- 255

Query: 121 SLATILKIGVACSVESPRERMDISDVVNNLQKV 153
                  +   C  E P ER   + ++ +L ++
Sbjct: 256 -----YDLMRQCWREKPYERPSFAQILVSLNRM 283

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 2e-09
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 3/97 (3%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG-DVYSYGILLL 59
               + DFGL        R    + +   GT+ Y  PE            DV+S GI+L 
Sbjct: 140 DNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 197

Query: 60  ETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDP 96
               G+ P         +  ++ +        + +D 
Sbjct: 198 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 234

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 5e-09
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
            +  + DFG    I       QS    + GT  +  PE           D++S GI+ +E
Sbjct: 153 GSVKLTDFGFCAQITP----EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208

Query: 61  TFTGKRP 67
              G+ P
Sbjct: 209 MIEGEPP 215

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 6e-09
 Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 28/166 (16%)

Query: 1   MTAHVGDFGLTRFIPEA---IRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGIL 57
              ++ DFGL +   +A          +  L GT  YA     +G   S   D+ S G +
Sbjct: 143 NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 202

Query: 58  LLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQ 117
           L+    G  P   + A         +    +++S  ++ L                    
Sbjct: 203 LMYFNLGSLPWQGLKAA--TKRQKYERISEKKMSTPIEVLC-----------------KG 243

Query: 118 VQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRCGIN 163
                AT L     C      ++ D S +    + +     R G +
Sbjct: 244 YPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNL---FHRQGFS 283

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 51.2 bits (122), Expect = 7e-09
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
              + DFGLT  +       + S     GT  +A PE   G  V  Y D++S G+L    
Sbjct: 164 ELKLIDFGLTAHL-----DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218

Query: 62  FTGKRP 67
            +G  P
Sbjct: 219 LSGLSP 224

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 9e-09
 Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 3/93 (3%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           M   + DFG  + +    +  +++S    GT  Y  PE           D+++ G ++ +
Sbjct: 145 MHIQITDFGTAKVLSPESKQARANSF--VGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 202

Query: 61  TFTGKRP-TSDIFAEGLDLHNFVKNALPEQISE 92
              G  P  +            ++   PE+   
Sbjct: 203 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP 235

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 1e-08
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 9/154 (5%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG-DVYSYGILLL 59
               + DFGL R    A  S  +       T+ Y PPE  +G R      D++  G ++ 
Sbjct: 154 GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA 213

Query: 60  ETFTGKRPTS-----DIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLK 114
           E +T              A    L   +   +   +        +   +  +   +++LK
Sbjct: 214 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 273

Query: 115 QDQVQESLATILKIGVACSVESPRERMDISDVVN 148
                     ++       V  P +R+D  D +N
Sbjct: 274 AYVRDPYALDLID---KLLVLDPAQRIDSDDALN 304

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 2e-08
 Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 33/154 (21%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               +GDFGL+R++ +   S    +   K  + +  PE     R ++  DV+ +G+ + E
Sbjct: 145 DCVKLGDFGLSRYMED---STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 201

Query: 61  TFT-GKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQ 119
               G +P   +     D+   ++N     +     P                       
Sbjct: 202 ILMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPP----------------------- 236

Query: 120 ESLATILKIGVACSVESPRERMDISDVVNNLQKV 153
            +L +++     C    P  R   +++   L  +
Sbjct: 237 -TLYSLMT---KCWAYDPSRRPRFTELKAQLSTI 266

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 3e-08
 Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 5/95 (5%)

Query: 4   HVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
            + DFG+ +          + +    GT  Y  PE  +G + +   D +S+G+LL E   
Sbjct: 143 KIADFGMCKEN----MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 198

Query: 64  GKRP-TSDIFAEGLDLHNFVKNALPEQISEVLDPL 97
           G+ P       E            P  + +    L
Sbjct: 199 GQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDL 233

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 3e-08
 Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 6/96 (6%)

Query: 4   HVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
            + DFGL   I        +    + GT  +  PE      +    D++S G++     +
Sbjct: 157 KIIDFGLAHKIDFG-----NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211

Query: 64  GKRP-TSDIFAEGLDLHNFVKNALPEQISEVLDPLF 98
           G  P   D   E L   + V     ++       L 
Sbjct: 212 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 3e-08
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG-DVYSYGILLL 59
               + DFG    + + + ++        GT  Y+PPE+    R       V+S GILL 
Sbjct: 148 GELKLIDFGSGALLKDTVYTD------FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 201

Query: 60  ETFTGKRP 67
           +   G  P
Sbjct: 202 DMVCGDIP 209

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 49.3 bits (117), Expect = 4e-08
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
           +  + DFGL   +     +          T  +A PE      V  Y D+++ G+L    
Sbjct: 167 SVKIIDFGLATKL-----NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221

Query: 62  FTGKRP 67
            +G  P
Sbjct: 222 LSGLSP 227

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.0 bits (116), Expect = 4e-08
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               V DFG+ R I ++  S   ++  + GT  Y  PE   G  V    DVYS G +L E
Sbjct: 148 NAVKVMDFGIARAIADSGNSVTQTA-AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 206

Query: 61  TFTGKRP 67
             TG+ P
Sbjct: 207 VLTGEPP 213

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 48.3 bits (114), Expect = 7e-08
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 4   HVGDFGLTRFIPEAIRSNQSSSI---GLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +V DFG+ +F  + +            L GT  Y      +G   S   D+ + G + + 
Sbjct: 146 YVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMY 205

Query: 61  TFTGKRPTSDIFAE 74
              G  P   + A 
Sbjct: 206 FLRGSLPWQGLKAA 219

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 9e-08
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 9/72 (12%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG-----DVYSYG 55
               + DFG++      I+   S      GT  +  PE  M             DV+S G
Sbjct: 147 GDIKLADFGVSAKNTRTIQRRDS----FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 202

Query: 56  ILLLETFTGKRP 67
           I L+E    + P
Sbjct: 203 ITLIEMAEIEPP 214

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.4 bits (112), Expect = 2e-07
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 8/98 (8%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFG  +++P+   +       L GT  Y  PE       +   D +S+GIL+ E
Sbjct: 141 GHIKITDFGFAKYVPDVTYT-------LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 193

Query: 61  TFTGKRP-TSDIFAEGLDLHNFVKNALPEQISEVLDPL 97
              G  P       +  +     +   P   +E +  L
Sbjct: 194 MLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDL 231

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 2e-07
 Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 10/160 (6%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
           +    G   L  F    I S Q +   +  T+ Y  PE  + S  +T  D++S G +  E
Sbjct: 148 LVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 207

Query: 61  TFTGKRPTSDI-FAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQ 119
            F  K         + L     V     E+       L             EK   D  +
Sbjct: 208 MFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDE 267

Query: 120 ESLATILKIGVACSVESPRERMDISDVVN-----NLQKVK 154
                +LK    C   +P +R+     ++     +L++ K
Sbjct: 268 LGKDLLLK----CLTFNPAKRISAYSALSHPYFQDLERCK 303

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.0 bits (111), Expect = 2e-07
 Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 5/66 (7%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFGL++          S      GT GY  PE       S   D +S G++      G
Sbjct: 151 ISDFGLSKME-----DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 205

Query: 65  KRPTSD 70
             P  D
Sbjct: 206 YPPFYD 211

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 37/161 (22%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + +FG  R +         +   L     Y  PE      VST  D++S G L+    +G
Sbjct: 145 IIEFGQARQL-----KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

Query: 65  KRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLAT 124
             P             F+     + I  ++           E T +E+  ++   E++  
Sbjct: 200 INP-------------FLAETNQQIIENIM---------NAEYTFDEEAFKEISIEAMDF 237

Query: 125 ILKIGVACSVESPRERMDISDVVN------NLQKVKSTLLR 159
           + +      V+  + RM  S+ +        +++V + ++R
Sbjct: 238 VDR----LLVKERKSRMTASEALQHPWLKQKIERVSTKVIR 274

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 6e-07
 Identities = 28/154 (18%), Positives = 46/154 (29%), Gaps = 32/154 (20%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFGL R I          +   +  V +  PE       +   DV+S+G+LL E
Sbjct: 172 NVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 229

Query: 61  TFT-GKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQ 119
            FT G  P   +  E  +L   +K                                    
Sbjct: 230 IFTLGGSPYPGVPVE--ELFKLLKEGHRMDKPSNCTN----------------------- 264

Query: 120 ESLATILKIGVACSVESPRERMDISDVVNNLQKV 153
                +  +   C    P +R     +V +L ++
Sbjct: 265 ----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 42.7 bits (100), Expect = 5e-06
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 11/69 (15%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG------DVYSYGILL 58
           + DFG +  +    +  +     + GT  Y  PE    S    +       D++S G+++
Sbjct: 151 LTDFGFSCQLDPGEKLRE-----VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 205

Query: 59  LETFTGKRP 67
                G  P
Sbjct: 206 YTLLAGSPP 214

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 5e-06
 Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 5/94 (5%)

Query: 5   VGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG 64
           + DFGL +       S+ ++     GT  Y  PE    +      D +  G+++ E   G
Sbjct: 146 ITDFGLCKEGI----SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201

Query: 65  KRP-TSDIFAEGLDLHNFVKNALPEQISEVLDPL 97
           + P  +       +L    +   P  +S     L
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL 235

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 8e-06
 Identities = 21/151 (13%), Positives = 41/151 (27%), Gaps = 10/151 (6%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + DFGL R     +R+       +      AP         ST  D++S G +  E
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHE---VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195

Query: 61  TFTGKRP---TSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQ 117
             T +      S+I                        P +     +       K+    
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL 255

Query: 118 VQESLATILKIGVACSVESPRERMDISDVVN 148
            ++  + + +         P +R+     + 
Sbjct: 256 DEDGRSLLSQ----MLHYDPNKRISAKAALA 282

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 2e-05
 Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 11/154 (7%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTY-GDVYSYGILLL 59
               + DFGL R        +         T  Y  PE  + S+  T   D++S G +L 
Sbjct: 146 CDLKICDFGLARVADPD-HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA 204

Query: 60  ETFTGKRP-----TSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLK 114
           E  + +         D     L +           I  +    ++            +L 
Sbjct: 205 EMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF 264

Query: 115 QDQVQESLATILKIGVACSVESPRERMDISDVVN 148
            +   ++L  + K        +P +R+++   + 
Sbjct: 265 PNADSKALDLLDK----MLTFNPHKRIEVEQALA 294

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 2e-05
 Identities = 23/150 (15%), Positives = 45/150 (30%), Gaps = 9/150 (6%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG-DVYSYGILLL 59
               + DFGL +      R+          T  Y  PE   G+R+   G D+++ G +L 
Sbjct: 137 GVLKLADFGLAKSFGSPNRAYTHQ----VVTRWYRAPELLFGARMYGVGVDMWAVGCILA 192

Query: 60  ETFTGKRP-TSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQV 118
           E          D   + L           E+    +  L      +              
Sbjct: 193 ELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAA 252

Query: 119 QESLATILKIGVACSVESPRERMDISDVVN 148
            + L  +++      + +P  R+  +  + 
Sbjct: 253 GDDLLDLIQ---GLFLFNPCARITATQALK 279

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 2e-05
 Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 9/151 (5%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               + +FGL R         +  S  +       P         ST  D++S G +  E
Sbjct: 138 GELKLANFGLARAFGI---PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194

Query: 61  TFTGKRP---TSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQ 117
                RP    +D+  +   +   +     EQ   +              T        +
Sbjct: 195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPK 254

Query: 118 VQESLATILKIGVACSVESPRERMDISDVVN 148
           +  +   +L+        +P +R+   + + 
Sbjct: 255 LNATGRDLLQ---NLLKCNPVQRISAEEALQ 282

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 4e-05
 Identities = 25/147 (17%), Positives = 48/147 (32%), Gaps = 27/147 (18%)

Query: 2   TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLET 61
              + DFG  +          +S      T  Y  PE     +     D++S G+++   
Sbjct: 152 ILKLTDFGFAKETTS-----HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 206

Query: 62  FTGKRPTSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQES 121
             G  P       GL +   +K  +     E  +P +                  +V E 
Sbjct: 207 LCGYPPFYS--NHGLAISPGMKTRIRMGQYEFPNPEW-----------------SEVSEE 247

Query: 122 LATILKIGVACSVESPRERMDISDVVN 148
           +  +++         P +RM I++ +N
Sbjct: 248 VKMLIR---NLLKTEPTQRMTITEFMN 271

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.5 bits (91), Expect = 8e-05
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 16/154 (10%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLL 59
               + DFGL R     +R      + L     Y  P+  MGS + ST  D++S G +  
Sbjct: 137 GELKIADFGLARAFGIPVRKYTHEIVTL----WYRAPDVLMGSKKYSTTIDIWSVGCIFA 192

Query: 60  ETFTGKRP-----TSDIFAEGLDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLK 114
           E   G         +D       +     +     ++E+  P +       E    E   
Sbjct: 193 EMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL--PKYDPNFTVYEPLPWESFL 250

Query: 115 QDQVQESLATILKIGVACSVESPRERMDISDVVN 148
           +   +  +  + K         P +R+     + 
Sbjct: 251 KGLDESGIDLLSK----MLKLDPNQRITAKQALE 280

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (89), Expect = 1e-04
 Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 8/98 (8%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLE 60
               V DFG  + +     +       L GT     PE  +    +   D ++ G+L+ E
Sbjct: 178 GYIQVTDFGFAKRVKGRTWT-------LCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230

Query: 61  TFTGKRP-TSDIFAEGLDLHNFVKNALPEQISEVLDPL 97
              G  P  +D   +  +     K   P   S  L  L
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 4e-04
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 4   HVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT 63
            + DFG  + +       + +   +      AP      +  ++  DV+S G +L E   
Sbjct: 163 KLCDFGSAKQL----VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218

Query: 64  GKRP 67
           G+  
Sbjct: 219 GQPI 222

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 6/68 (8%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYG-DVYSYGILLL 59
               + D+GL  F       N         +  +  PE  +  ++  Y  D++S G +L 
Sbjct: 167 RKLRLIDWGLAEFYHPGQEYNVR-----VASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 221

Query: 60  ETFTGKRP 67
                K P
Sbjct: 222 SMIFRKEP 229

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.0 bits (85), Expect = 5e-04
 Identities = 22/102 (21%), Positives = 32/102 (31%), Gaps = 11/102 (10%)

Query: 1   MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-GSRVSTYGDVYSYGILLL 59
               + D GL     +             GT GY  PE    G    +  D +S G +L 
Sbjct: 144 GHVRISDLGLACDFSK------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 197

Query: 60  ETFTGKRP----TSDIFAEGLDLHNFVKNALPEQISEVLDPL 97
           +   G  P     +    E   +   +   LP+  S  L  L
Sbjct: 198 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 239

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (82), Expect = 0.001
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 18/137 (13%)

Query: 30  GTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRP-------TSDIFAEGLDLHNFV 82
            T  Y  PE  +G+      D++S   L+ E  TG          +     + +     +
Sbjct: 191 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 250

Query: 83  KNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVE------- 135
              LP  +              G      KLK   +++ L    K     + E       
Sbjct: 251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 310

Query: 136 ----SPRERMDISDVVN 148
                PR+R D   +VN
Sbjct: 311 MLQLDPRKRADAGGLVN 327

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	163
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.91
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.91
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.91
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.9
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.9
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.9
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.9
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.9
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.9
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.89
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.89
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.89
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.89
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.89
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.89
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.88
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.88
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.88
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.88
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.88
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.87
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.87
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.87
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.87
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.87
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.87
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.87
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.86
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.86
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.86
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.86
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.86
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.86
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.86
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.86
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.85
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.85
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.84
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.84
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.83
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.83
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.83
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.83
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.82
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.82
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.81
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.81
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.81
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.8
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.8
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.79
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.79
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.79
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.78
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.77
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.76
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.75
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.75
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.73

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.4e-27  Score=162.04  Aligned_cols=129  Identities=22%  Similarity=0.315  Sum_probs=84.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC---CCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS---RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~---~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+|+.......  ........||+.|+|||++.+.   .|+.++|||||||+++|+++|+.||.+..... ..
T Consensus       142 ~~Kl~DFGla~~~~~~~~--~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~-~~  218 (276)
T d1uwha_         142 TVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QI  218 (276)
T ss_dssp             SEEECCCCCSCC--------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HH
T ss_pred             CEEEccccceeeccccCC--cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH-HH
Confidence            689999999987643211  1122345789999999998643   47889999999999999999999997542211 11


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      ...+.....       .+......                ..+...+.+|+.+||+.||++|||+++|++.|+.+.++
T Consensus       219 ~~~~~~~~~-------~p~~~~~~----------------~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         219 IFMVGRGYL-------SPDLSKVR----------------SNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HHHHHHTSC-------CCCGGGSC----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHhcCCC-------CCcchhcc----------------ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            111111110       01000000                02234567899999999999999999999999988764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.9e-26  Score=157.16  Aligned_cols=145  Identities=19%  Similarity=0.165  Sum_probs=89.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC------CCccccceehhhHHHHHHHhCCCCCccccccC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS------RVSTYGDVYSYGILLLETFTGKRPTSDIFAEG   75 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~------~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~   75 (163)
                      .+||+|||+++.................||+.|+|||++...      .++.++|||||||+++|+++|..|+.......
T Consensus       146 ~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~  225 (303)
T d1vjya_         146 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  225 (303)
T ss_dssp             CEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC
T ss_pred             CeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccc
Confidence            689999999987754322222233446799999999987653      25678999999999999999988775432221


Q ss_pred             cchHHHHHh-cCchhhhh-hhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           76 LDLHNFVKN-ALPEQISE-VLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        76 ~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      ......... ........ ..........+.          ..........+.+|+.+||+.||++|||+.||++.|+.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i  295 (303)
T d1vjya_         226 LPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN----------RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG----------GGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cchhhcccccchHHHHHHHHhccccCCCCCc----------ccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            111111000 00011111 111111111111          011124556688899999999999999999999999988


Q ss_pred             HHH
Q 031224          154 KST  156 (163)
Q Consensus       154 ~~~  156 (163)
                      .++
T Consensus       296 ~~~  298 (303)
T d1vjya_         296 SQQ  298 (303)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            765

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-25  Score=156.63  Aligned_cols=126  Identities=19%  Similarity=0.281  Sum_probs=82.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhC-CCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG-KRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g-~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+|+.......  ........||+.|+|||++.+..++.++|||||||+++|++++ ..||.+..... .+..
T Consensus       172 ~~Kl~DFGla~~~~~~~~--~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~-~~~~  248 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR  248 (299)
T ss_dssp             CEEECC------CCSCTT--SCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHHH
T ss_pred             cEEEccCcchhhcccccc--ccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH-HHHH
Confidence            589999999987643311  1222345789999999999888899999999999999999986 55775432111 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+.....        +    ..+.               .....+.+++.+||+.||++|||++|++++|+++.++.
T Consensus       249 ~~~~~~~--------~----~~~~---------------~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~n  298 (299)
T d1ywna1         249 RLKEGTR--------M----RAPD---------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  298 (299)
T ss_dssp             HHHHTCC--------C----CCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHhcCCC--------C----CCCc---------------cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCC
Confidence            1111110        0    0000               11234678999999999999999999999999987653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8e-26  Score=154.75  Aligned_cols=123  Identities=28%  Similarity=0.396  Sum_probs=76.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhC-CCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG-KRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g-~~p~~~~~~~~~~~~~   80 (163)
                      ++||+|||+++.......   .......||..|+|||++.+..++.++|||||||+++|++++ .+||....  ......
T Consensus       139 ~~Kl~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~--~~~~~~  213 (263)
T d1sm2a_         139 VIKVSDFGMTRFVLDDQY---TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NSEVVE  213 (263)
T ss_dssp             CEEECSCC---------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC--HHHHHH
T ss_pred             CeEecccchheeccCCCc---eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC--HHHHHH
Confidence            689999999987644311   112234688999999999988899999999999999999995 55553321  111111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....        .    ..+.               .+...+.+|+.+||+.||++|||+++|++.|+++.++
T Consensus       214 ~i~~~~~--------~----~~p~---------------~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         214 DISTGFR--------L----YKPR---------------LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHHHTCC--------C----CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCC--------C----CCcc---------------ccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            1111100        0    0000               1123467899999999999999999999999998775

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=3.1e-25  Score=154.36  Aligned_cols=126  Identities=25%  Similarity=0.453  Sum_probs=77.0

Q ss_pred             CceeecccccccccCccccCCC-cccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcch
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQ-SSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDL   78 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~   78 (163)
                      .++||+|||+++.+........ .......|++.|+|||.+.+..++.++|||||||+++|+++ |+.||.+....  ..
T Consensus       165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~~  242 (299)
T d1jpaa_         165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--DV  242 (299)
T ss_dssp             CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HH
T ss_pred             CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--HH
Confidence            3689999999987754321111 11223457889999999988889999999999999999998 89999653211  11


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ...+.....            ...+               ......+.+|+.+||+.||++|||+.||++.|+.+.+
T Consensus       243 ~~~i~~~~~------------~~~~---------------~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         243 INAIEQDYR------------LPPP---------------MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHTTCC------------CCCC---------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCC------------CCCC---------------ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            111111000            0000               0223446789999999999999999999999988764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-25  Score=154.81  Aligned_cols=126  Identities=20%  Similarity=0.330  Sum_probs=78.3

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      ..+||+|||+++.+...... ........||+.|+|||++.+..++.++|||||||+++|++++..|+...... .....
T Consensus       147 ~~~Kl~DFGla~~~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-~~~~~  224 (283)
T d1mqba_         147 LVCKVSDFGLSRVLEDDPEA-TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMK  224 (283)
T ss_dssp             CCEEECCCCC------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHH
T ss_pred             CeEEEcccchhhcccCCCcc-ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-HHHHH
Confidence            36899999999876543111 11223346789999999998888999999999999999999966655332111 01111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+...            .....+               ......+.+|+.+||+.||++|||+.+|++.|+.+.+
T Consensus       225 ~i~~~------------~~~~~~---------------~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         225 AINDG------------FRLPTP---------------MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHTT------------CCCCCC---------------TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHhcc------------CCCCCc---------------hhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            11110            000000               0123446789999999999999999999999988765

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-25  Score=154.19  Aligned_cols=129  Identities=19%  Similarity=0.276  Sum_probs=91.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+...... ........||+.|+|||++....++.++|||||||+++|+++ |+.||.+....  ....
T Consensus       147 ~~Kl~DFGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~  223 (285)
T d1u59a_         147 YAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMA  223 (285)
T ss_dssp             EEEECCCTTCEECTTCSCE-ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHH
T ss_pred             ceeeccchhhhcccccccc-cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence            5899999999987543211 112233468899999999988889999999999999999998 89999653211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHhc
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRC  160 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~~  160 (163)
                      .+.....        +    ..+               ......+.+|+.+||+.||++|||+.+|++.|+.+..++.+.
T Consensus       224 ~i~~~~~--------~----~~p---------------~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~  276 (285)
T d1u59a_         224 FIEQGKR--------M----ECP---------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  276 (285)
T ss_dssp             HHHTTCC--------C----CCC---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHcCCC--------C----CCC---------------CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhc
Confidence            1111100        0    000               012344678999999999999999999999999988776553

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.6e-25  Score=154.22  Aligned_cols=130  Identities=23%  Similarity=0.297  Sum_probs=90.1

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      +.+||+|||+++.................|+..|+|||.+....++.++||||||++++|+++|..||....... ....
T Consensus       167 ~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-~~~~  245 (311)
T d1r0pa_         167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITV  245 (311)
T ss_dssp             CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHH
T ss_pred             CCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-HHHH
Confidence            368999999999875543332333334568999999999988889999999999999999999887775432211 1222


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL  158 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~  158 (163)
                      .+.....        +.    .+.               .....+.+|+.+||+.||++|||+.||++.|+++.+++.
T Consensus       246 ~i~~g~~--------~~----~p~---------------~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~  296 (311)
T d1r0pa_         246 YLLQGRR--------LL----QPE---------------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  296 (311)
T ss_dssp             HHHTTCC--------CC----CCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHcCCC--------CC----Ccc---------------cCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhh
Confidence            1111100        00    000               112346789999999999999999999999999987643

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-25  Score=153.68  Aligned_cols=130  Identities=19%  Similarity=0.289  Sum_probs=89.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+...... ........||+.|+|||.+.+..++.++|||||||+++|+++ |+.||.+....  ....
T Consensus       145 ~~kl~DFGla~~~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--~~~~  221 (277)
T d1xbba_         145 YAKISDFGLSKALRADENY-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTA  221 (277)
T ss_dssp             EEEECCCTTCEECCTTCSE-EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH
T ss_pred             cccccchhhhhhccccccc-cccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH--HHHH
Confidence            5799999999876433111 112233468899999999988889999999999999999997 89999753211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHHHhc
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLLRC  160 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~~~~  160 (163)
                      .+.....            ...+               ..+...+.+|+.+||+.||++|||+++|+..|++...+..+.
T Consensus       222 ~i~~~~~------------~~~p---------------~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~e  274 (277)
T d1xbba_         222 MLEKGER------------MGCP---------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE  274 (277)
T ss_dssp             HHHTTCC------------CCCC---------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCC------------CCCC---------------cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhcCCC
Confidence            1111100            0000               012344678999999999999999999999999987777665


Q ss_pred             c
Q 031224          161 G  161 (163)
Q Consensus       161 ~  161 (163)
                      |
T Consensus       275 ~  275 (277)
T d1xbba_         275 G  275 (277)
T ss_dssp             H
T ss_pred             C
Confidence            4

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4e-25  Score=155.43  Aligned_cols=121  Identities=24%  Similarity=0.315  Sum_probs=84.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+|+.......  ........||+.|+|||++.+..++.++|||||||+++|+++ |+.||.+..... .+..
T Consensus       202 ~~Kl~DFGla~~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~-~~~~  278 (325)
T d1rjba_         202 VVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-NFYK  278 (325)
T ss_dssp             EEEECCCGGGSCGGGCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH
T ss_pred             eEEEeeccccccccCCCc--eeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH-HHHH
Confidence            589999999987643211  112234567999999999988889999999999999999997 899997542211 1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+.....            ...+.               .....+.+|+.+||+.||++|||++||++.|..
T Consensus       279 ~~~~~~~------------~~~p~---------------~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         279 LIQNGFK------------MDQPF---------------YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHTTCC------------CCCCT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHhcCCC------------CCCCC---------------cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            1111110            00000               122346789999999999999999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.6e-25  Score=151.62  Aligned_cols=124  Identities=20%  Similarity=0.289  Sum_probs=84.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.+.....   .......|++.|+|||++....++.++|||||||+++|+++|..|+...... ......
T Consensus       147 ~~Kl~DFGla~~~~~~~~---~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-~~~~~~  222 (272)
T d1qpca_         147 SCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQN  222 (272)
T ss_dssp             CEEECCCTTCEECSSSCE---ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHH
T ss_pred             ceeeccccceEEccCCcc---ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-HHHHHH
Confidence            689999999998754311   1122346888999999998788999999999999999999965554332111 011111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      +....        .+..    +.               .....+.+|+.+||+.||++|||+++|++.|+.+.++
T Consensus       223 i~~~~--------~~~~----p~---------------~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         223 LERGY--------RMVR----PD---------------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             HHTTC--------CCCC----CT---------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhcC--------CCCC----cc---------------cChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            11100        0000    00               1223467899999999999999999999999987653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.9e-25  Score=150.55  Aligned_cols=124  Identities=19%  Similarity=0.347  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+.....   .......||+.|+|||++.+..++.++|||||||+++|+++ |..||.+....  ....
T Consensus       146 ~~Kl~DfG~a~~~~~~~~---~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~--~~~~  220 (273)
T d1mp8a_         146 CVKLGDFGLSRYMEDSTY---YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIG  220 (273)
T ss_dssp             EEEECC----------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH
T ss_pred             cEEEccchhheeccCCcc---eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            589999999987643211   11233467899999999988889999999999999999997 88898654221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                      .+......    .+++                       .....+.+|+.+||+.||++|||++||++.|+++.++-
T Consensus       221 ~i~~~~~~----~~~~-----------------------~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  270 (273)
T d1mp8a_         221 RIENGERL----PMPP-----------------------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  270 (273)
T ss_dssp             HHHTTCCC----CCCT-----------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCC----CCCC-----------------------CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            11111000    0000                       12344678999999999999999999999999987663

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.3e-24  Score=149.16  Aligned_cols=113  Identities=23%  Similarity=0.390  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....      .....+||+.|+|||++.+ .++.++||||+||+++++++|+.||.+..... .+...
T Consensus       153 ~~Kl~DFGla~~~~~~------~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~-~~~~~  224 (270)
T d1t4ha_         153 SVKIGDLGLATLKRAS------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRR  224 (270)
T ss_dssp             CEEECCTTGGGGCCTT------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHH
T ss_pred             CEEEeecCcceeccCC------ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHH-HHHHH
Confidence            5899999999864321      1234579999999998864 58999999999999999999999996432111 11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +.....   ...++.                       .....+.+|+.+||+.||++|||++|+++
T Consensus       225 i~~~~~---~~~~~~-----------------------~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         225 VTSGVK---PASFDK-----------------------VAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HTTTCC---CGGGGG-----------------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHcCCC---CcccCc-----------------------cCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            111000   000000                       11223567999999999999999999976

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-24  Score=148.92  Aligned_cols=118  Identities=21%  Similarity=0.257  Sum_probs=79.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+|+.+..+..  .......+||+.|+|||++.+..+ +.++||||+||+++++++|+.||............
T Consensus       141 ~~KL~DFG~a~~~~~~~~--~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~  218 (271)
T d1nvra_         141 NLKISDFGLATVFRYNNR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD  218 (271)
T ss_dssp             CEEECCCTTCEECEETTE--ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH
T ss_pred             CEEEccchhheeeccCCc--cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            589999999987643211  112234679999999999988775 57799999999999999999999654322111111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ...........                           ......+.+|+.+||+.||++|||++|+++
T Consensus       219 ~~~~~~~~~~~---------------------------~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         219 WKEKKTYLNPW---------------------------KKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHTTCTTSTTG---------------------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HhcCCCCCCcc---------------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11100000000                           011233567899999999999999999875

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.4e-25  Score=150.30  Aligned_cols=114  Identities=20%  Similarity=0.241  Sum_probs=76.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...    ........||+.|+|||++.+..|+.++|||||||+++|+++|+.||.+....  .....
T Consensus       152 ~vkl~DFG~a~~~~~~----~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~--~~~~~  225 (269)
T d2java1         152 NVKLGDFGLARILNHD----TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGK  225 (269)
T ss_dssp             CEEECCHHHHHHC---------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHH
T ss_pred             cEEEeeccceeecccC----CCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH--HHHHH
Confidence            5899999999886443    11223457899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +..           ..... .+.               .....+.+|+.+||+.||++|||++|+++
T Consensus       226 i~~-----------~~~~~-~~~---------------~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         226 IRE-----------GKFRR-IPY---------------RYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHH-----------TCCCC-CCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHc-----------CCCCC-CCc---------------ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            110           00000 000               11234678899999999999999999975

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.6e-24  Score=146.01  Aligned_cols=119  Identities=26%  Similarity=0.442  Sum_probs=84.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+......   ......|+..|+|||.+.+..++.++|||||||+++|+++ |+.||......  ....
T Consensus       138 ~~kl~DfG~a~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~--~~~~  212 (258)
T d1k2pa_         138 VVKVSDFGLSRYVLDDEYT---SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAE  212 (258)
T ss_dssp             CEEECCCSSCCBCSSSSCC---CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHH
T ss_pred             cEEECcchhheeccCCCce---eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH--HHHH
Confidence            5899999999876543211   2223568999999999988889999999999999999998 79999654221  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQK  152 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~  152 (163)
                      .+.....            ...+.               .....+.+|+.+||+.||++|||++++++.|..
T Consensus       213 ~i~~~~~------------~~~p~---------------~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         213 HIAQGLR------------LYRPH---------------LASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHTTCC------------CCCCT---------------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHhCCC------------CCCcc---------------cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            1111100            00000               122457789999999999999999999998854

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.7e-24  Score=149.01  Aligned_cols=116  Identities=20%  Similarity=0.240  Sum_probs=80.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...    .......+||+.|+|||++.+..++.++||||+||+++++++|+.||.+..... .+...
T Consensus       154 ~vkl~DFG~a~~~~~~----~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~~  228 (293)
T d1yhwa1         154 SVKLTDFGFCAQITPE----QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLI  228 (293)
T ss_dssp             CEEECCCTTCEECCST----TCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH
T ss_pred             cEeeccchhheeeccc----cccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-HHHHH
Confidence            5899999999876432    112234579999999999998889999999999999999999999996532111 00011


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .....+         .+  ..+               ......+.+|+.+||+.||++|||+.|+++
T Consensus       229 ~~~~~~---------~~--~~~---------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         229 ATNGTP---------EL--QNP---------------EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHCSC---------CC--SSG---------------GGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhCCCC---------CC--CCc---------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            100000         00  000               011234677999999999999999999975

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.5e-24  Score=150.86  Aligned_cols=123  Identities=19%  Similarity=0.301  Sum_probs=84.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........  .......||+.|+|||++.+..++.++|||||||+++|+++ |..||.+....  .+..
T Consensus       149 ~~kl~DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~--~~~~  224 (317)
T d1xkka_         149 HVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS  224 (317)
T ss_dssp             EEEECCCSHHHHTTTTCC----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG--GHHH
T ss_pred             CeEeeccccceeccccccc--ccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH--HHHH
Confidence            5899999999876543211  11223458999999999988889999999999999999998 78888653221  1222


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+......            ..+               ..+...+.+|+.+||+.||++|||+.++++.|..+.+
T Consensus       225 ~i~~~~~~------------~~p---------------~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         225 ILEKGERL------------PQP---------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             HHHHTCCC------------CCC---------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCC------------CCC---------------cccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            22111100            000               0123446789999999999999999999999988764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=1.1e-24  Score=151.76  Aligned_cols=122  Identities=23%  Similarity=0.341  Sum_probs=83.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCC-CCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGK-RPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~-~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+.....  ........|++.|+|||.+.+..++.++|||||||+++|++++. .||.+....  ....
T Consensus       178 ~~Kl~DFGls~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~--e~~~  253 (301)
T d1lufa_         178 VVKIADFGLSRNIYSADY--YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE--EVIY  253 (301)
T ss_dssp             CEEECCCSCHHHHTGGGC--BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH
T ss_pred             cEEEccchhheeccCCcc--ccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHH--HHHH
Confidence            689999999987644311  11223356788999999998888999999999999999999985 566543211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      .+..           ........                .....+..|+.+||+.||++||||.||++.|+.+-
T Consensus       254 ~v~~-----------~~~~~~p~----------------~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         254 YVRD-----------GNILACPE----------------NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHT-----------TCCCCCCT----------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHc-----------CCCCCCCc----------------cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            1111           10000000                12234678999999999999999999999998763

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.4e-24  Score=150.52  Aligned_cols=64  Identities=27%  Similarity=0.448  Sum_probs=53.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDI   71 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~   71 (163)
                      .+||+|||+|+.+...      .....+||+.|+|||++.+..|+.++||||+||+++|+++|+.||.+.
T Consensus       143 ~vkl~DFGla~~~~~~------~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         143 EIKLCDFGVSGQLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             CEEECCCCCCHHHHHH------TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             CEEEeeCCCccccCCC------ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            5899999999875332      123457999999999999989999999999999999999999999653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=6.7e-24  Score=146.77  Aligned_cols=122  Identities=18%  Similarity=0.273  Sum_probs=83.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      ++||+|||+++......   ........|+..|+|||++.+..|+.++|||||||+++|++++..|+...... ......
T Consensus       153 ~~Kl~DFG~a~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~-~~~~~~  228 (287)
T d1opja_         153 LVKVADFGLSRLMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYEL  228 (287)
T ss_dssp             CEEECCCCCTTTCCSSS---SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHH
T ss_pred             cEEEccccceeecCCCC---ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH-HHHHHH
Confidence            58999999998765431   11222345788999999998888999999999999999999977665432111 011111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      +....            ....+               ......+.+|+.+||+.||++|||+++|++.|+.+.
T Consensus       229 i~~~~------------~~~~~---------------~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         229 LEKDY------------RMERP---------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             HHTTC------------CCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HhcCC------------CCCCC---------------ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            11110            00000               012344678999999999999999999999998764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1e-23  Score=144.10  Aligned_cols=111  Identities=23%  Similarity=0.272  Sum_probs=79.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....      ......||+.|+|||++.+..++.++||||+||+++++++|+.||.+...     ...
T Consensus       144 ~~kl~DFG~a~~~~~~------~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~  212 (263)
T d2j4za1         144 ELKIADFGWSVHAPSS------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QET  212 (263)
T ss_dssp             CEEECCCCSCSCCCCC------CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH
T ss_pred             CEeecccceeeecCCC------cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH-----HHH
Confidence            5799999999876432      12235799999999999988899999999999999999999999965321     111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....        .....  ..+.               .....+.+|+.+||+.||++|||++|+++
T Consensus       213 ~~~i--------~~~~~--~~p~---------------~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         213 YKRI--------SRVEF--TFPD---------------FVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHH--------HTTCC--CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHH--------HcCCC--CCCc---------------cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            1100        00000  0000               11234677899999999999999999986

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=6.3e-24  Score=148.11  Aligned_cols=117  Identities=19%  Similarity=0.208  Sum_probs=70.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     ......+||+.|+|||++.+..|+.++||||+||+++++++|+.||.+....  .....
T Consensus       148 ~vkl~DFG~a~~~~~~-----~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~~~  220 (307)
T d1a06a_         148 KIMISDFGLSKMEDPG-----SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KLFEQ  220 (307)
T ss_dssp             CEEECCC-----------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHH
T ss_pred             eEEEeccceeEEccCC-----CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4899999999876432     1123357999999999999888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +...           ......+.             .......+.+|+.+||+.||++|||++|+++.
T Consensus       221 i~~~-----------~~~~~~~~-------------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         221 ILKA-----------EYEFDSPY-------------WDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHTT-----------CCCCCTTT-------------TTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             Hhcc-----------CCCCCCcc-------------ccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            1110           00000000             00112346789999999999999999999873

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1e-23  Score=144.05  Aligned_cols=118  Identities=25%  Similarity=0.318  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++.....       .....++..|+|||++.+..++.++|||||||+++|+++ |+.||......  ....
T Consensus       141 ~~kl~dfg~s~~~~~~-------~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~--~~~~  211 (262)
T d1byga_         141 VAKVSDFGLTKEASST-------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVP  211 (262)
T ss_dssp             CEEECCCCC-------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHH
T ss_pred             CEeecccccceecCCC-------CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH--HHHH
Confidence            5799999999865321       122357889999999988889999999999999999998 67777543211  1222


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+....        .+.+..                   .....+.+|+.+||+.||++|||+.+++++|+.+.+
T Consensus       212 ~i~~~~--------~~~~~~-------------------~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         212 RVEKGY--------KMDAPD-------------------GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             HHTTTC--------CCCCCT-------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCC--------CCCCCc-------------------cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            111100        000000                   112346789999999999999999999999998865

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.8e-24  Score=147.03  Aligned_cols=123  Identities=21%  Similarity=0.312  Sum_probs=81.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+...... ........|+..|+|||++.+..++.++||||||++++|+++ |+.||.+.....  ...
T Consensus       149 ~vkl~DfGl~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~--~~~  225 (273)
T d1u46a_         149 LVKIGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILH  225 (273)
T ss_dssp             EEEECCCTTCEECCC-CCE-EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHH
T ss_pred             ceeeccchhhhhcccCCCc-ceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH--HHH
Confidence            5899999999987543211 112223457889999999988889999999999999999998 899996532111  111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHh
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV  153 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~  153 (163)
                      .+..   ..        .....+               ......+.+|+.+||+.||++|||+.+|++.|.+.
T Consensus       226 ~i~~---~~--------~~~~~~---------------~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         226 KIDK---EG--------ERLPRP---------------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHT---SC--------CCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHh---CC--------CCCCCc---------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            1100   00        000000               01123467899999999999999999999988765

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=2.5e-23  Score=144.61  Aligned_cols=133  Identities=17%  Similarity=0.134  Sum_probs=88.7

Q ss_pred             ceeecccccccccCccccCC---CcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSN---QSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~---~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+|++|||+|+.+.......   ........||+.|+|||.+.+..++.++|||||||+++|+++|+.||..........
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~  223 (299)
T d1ckia_         144 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  223 (299)
T ss_dssp             CEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC------
T ss_pred             eeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH
Confidence            48999999999875432111   122334579999999999988889999999999999999999999997643322111


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      ....  ............                    ........+.+++..||+.||++||+++++.+.|+++..+
T Consensus       224 ~~~~--~~~~~~~~~~~~--------------------~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         224 KYER--ISEKKMSTPIEV--------------------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             -HHH--HHHHHHHSCHHH--------------------HTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHH--hhcccCCCChhH--------------------hccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            1100  000000000000                    0012234577899999999999999999999999887654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.8e-23  Score=146.17  Aligned_cols=125  Identities=23%  Similarity=0.290  Sum_probs=86.5

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhC-CCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTG-KRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g-~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++.......  ........|++.|+|||++....++.++|||||||+++|++++ .++|.... ....+..
T Consensus       183 ~~ki~DfG~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~-~~~~~~~  259 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSN--YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP-VDSKFYK  259 (311)
T ss_dssp             EEEECCCGGGSCTTSCTT--SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-SSHHHHH
T ss_pred             cccccccchheeccCCCc--ceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCC-HHHHHHH
Confidence            579999999997754321  1222345789999999999888899999999999999999984 55554322 1112222


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+.....        +    ..+.               .....+.+|+.+||+.||.+|||+++|+++|+++.++
T Consensus       260 ~i~~~~~--------~----~~~~---------------~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         260 MIKEGFR--------M----LSPE---------------HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHTCC--------C----CCCT---------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhcCCC--------C----CCcc---------------cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            2221111        0    0000               1234467899999999999999999999999987665

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.4e-23  Score=145.97  Aligned_cols=138  Identities=14%  Similarity=0.094  Sum_probs=82.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......    ......+||+.|+|||++... .|+.++||||+||+++|+++|..||.+....+ .+..
T Consensus       138 ~~KL~DFG~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~  212 (299)
T d1ua2a_         138 VLKLADFGLAKSFGSPN----RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTR  212 (299)
T ss_dssp             CEEECCCGGGSTTTSCC----CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             ccccccCccccccCCCc----ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHH
Confidence            57999999998764431    122335789999999988655 47899999999999999999999996532211 0111


Q ss_pred             HHHh---cCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKN---ALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ....   .....+.....................    .........+.+|+.+||+.||++|||++|+++
T Consensus       213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         213 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH----HIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH----HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHhcCCCChhhccchhccchhhhhccCCCCChH----HhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            1100   000011110000000000000000100    111122345788999999999999999999986

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.2e-23  Score=145.50  Aligned_cols=120  Identities=17%  Similarity=0.153  Sum_probs=80.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++......     .....+||+.|+|||++.+..|+.++||||+||+++++++|+.||.+......  ...
T Consensus       152 ~~Kl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~--~~~  224 (335)
T d2ozaa1         152 ILKLTDFGFAKETTSHN-----SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--SPG  224 (335)
T ss_dssp             CEEECCCTTCEECCCCC-----CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------
T ss_pred             cccccccceeeeccCCC-----ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH--HHH
Confidence            47999999998764421     22345799999999999888899999999999999999999999976422110  000


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +.....       ....  ..+        .   .........+.+|+.+||+.||++|||+.|+++
T Consensus       225 ~~~~i~-------~~~~--~~~--------~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         225 MKTRIR-------MGQY--EFP--------N---PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             ---CCC-------SCSS--SCC--------T---THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHh-------cCCC--CCC--------C---cccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            000000       0000  000        0   001122345678999999999999999999976

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.9e-24  Score=145.91  Aligned_cols=116  Identities=18%  Similarity=0.222  Sum_probs=78.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC-----CCCCccccceehhhHHHHHHHhCCCCCccccccCc
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM-----GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL   76 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~-----~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~   76 (163)
                      .+||+|||+|+.....    ........||+.|+|||++.     ...|+.++||||+||+++++++|+.||.+..... 
T Consensus       148 ~~Kl~DFG~a~~~~~~----~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~-  222 (288)
T d2jfla1         148 DIKLADFGVSAKNTRT----IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR-  222 (288)
T ss_dssp             CEEECCCTTCEECHHH----HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-
T ss_pred             CEEEEechhhhccCCC----cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH-
Confidence            5799999999865332    11123457999999999874     3457899999999999999999999997542211 


Q ss_pred             chHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           77 DLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                       ....+....+        +.+.  .               .......+.+|+.+||+.||++|||++|+++
T Consensus       223 -~~~~i~~~~~--------~~~~--~---------------~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         223 -VLLKIAKSEP--------PTLA--Q---------------PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             -HHHHHHHSCC--------CCCS--S---------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -HHHHHHcCCC--------CCCC--c---------------cccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             1111111000        0000  0               0012234678999999999999999999976

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.9e-24  Score=147.34  Aligned_cols=121  Identities=21%  Similarity=0.245  Sum_probs=82.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCC-CCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKR-PTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~-p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++......     ......||..|+|||.+.+..++.++|||||||+++|+++|.. ||.+....  .+..
T Consensus       165 ~~kl~DfG~a~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~  237 (309)
T d1fvra_         165 VAKIADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYE  237 (309)
T ss_dssp             CEEECCTTCEESSCEEC-----CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH
T ss_pred             ceEEccccccccccccc-----cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence            57999999998654321     1123458899999999988889999999999999999999754 56442111  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKST  156 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~  156 (163)
                      .+....        .+    ..+               ......+.+|+.+||+.||++|||+++|++.|+.+.++
T Consensus       238 ~i~~~~--------~~----~~~---------------~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         238 KLPQGY--------RL----EKP---------------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HGGGTC--------CC----CCC---------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHhcC--------CC----CCC---------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            111000        00    000               01234577899999999999999999999999988753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.9e-23  Score=142.96  Aligned_cols=148  Identities=19%  Similarity=0.182  Sum_probs=82.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCc-chH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGL-DLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~-~~~   79 (163)
                      .+||+|||+++.+..............+||+.|+|||++.+. .++.++||||+||+++|+++|+.||.+...... ...
T Consensus       155 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i  234 (318)
T d3blha1         155 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI  234 (318)
T ss_dssp             CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHH
Confidence            579999999987654322223333445799999999998765 588999999999999999999999975322110 011


Q ss_pred             HHHHhcCchhh-hhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           80 NFVKNALPEQI-SEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        80 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ........... ....+.............................+.+|+.+||+.||++|||++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         235 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             HHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            11111111110 00000000000000000000000000111223456789999999999999999999863

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.2e-23  Score=142.04  Aligned_cols=123  Identities=23%  Similarity=0.363  Sum_probs=85.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHh-CCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFT-GKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~-g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.......  ........|++.|+|||.+.+..|+.++|||||||+++|+++ |..||.+....  ....
T Consensus       173 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~--~~~~  248 (299)
T d1fgka_         173 VMKIADFGLARDIHHIDY--YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELFK  248 (299)
T ss_dssp             CEEECSTTCCCCGGGCCT--TCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH
T ss_pred             CeEeccchhhcccccccc--ccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH--HHHH
Confidence            579999999987644321  122234568899999999988889999999999999999998 68888643211  1111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      .+....        .+    ..+.               .....+.+|+.+||+.||++|||+.||++.|+++..
T Consensus       249 ~i~~~~--------~~----~~p~---------------~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         249 LLKEGH--------RM----DKPS---------------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HHHTTC--------CC----CCCS---------------SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCC--------CC----CCCc---------------cchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            111100        00    0000               112346789999999999999999999999988743

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=3.2e-23  Score=144.58  Aligned_cols=111  Identities=23%  Similarity=0.310  Sum_probs=76.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCC---CCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMG---SRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~---~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+++.....        ....||+.|+|||++.+   ..|+.++|||||||+++|+++|..||.+..... .+
T Consensus       153 ~~Kl~DFG~a~~~~~~--------~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~-~~  223 (309)
T d1u5ra_         153 LVKLGDFGSASIMAPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-AL  223 (309)
T ss_dssp             EEEECCCTTCBSSSSB--------CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HH
T ss_pred             CEEEeecccccccCCC--------CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH-HH
Confidence            5899999999865321        23579999999998854   348899999999999999999999996532111 01


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ........         +.+...                  .....+.+|+.+||+.||++|||++|+++
T Consensus       224 ~~i~~~~~---------~~~~~~------------------~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         224 YHIAQNES---------PALQSG------------------HWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHSCC---------CCCSCT------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHhCCC---------CCCCCC------------------CCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            11110000         000000                  11234678999999999999999999975

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-22  Score=141.80  Aligned_cols=137  Identities=18%  Similarity=0.150  Sum_probs=82.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     .......||+.|+|||++.+..|+.++||||+||+++|+++|+.||.+..... .+...
T Consensus       154 ~~kl~dfg~~~~~~~~-----~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i  227 (305)
T d1blxa_         154 QIKLADFGLARIYSFQ-----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKI  227 (305)
T ss_dssp             CEEECSCCSCCCCCGG-----GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred             Ceeecchhhhhhhccc-----ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH-HHHHH
Confidence            5799999999865432     22234679999999999999899999999999999999999999997542211 11111


Q ss_pred             HHh--c-CchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKN--A-LPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...  . ....+....... .............    .........+.+|+.+||+.||++|||+.|+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         228 LDVIGLPGEEDWPRDVALP-RQAFHSKSAQPIE----KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             HHHHCCCCGGGSCTTCSSC-GGGSCCCCCCCGG----GTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHhhCCCchhcccccccch-hhhhccccccchh----hccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            110  0 000100000000 0000000000000    0011122346779999999999999999999864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.4e-23  Score=144.88  Aligned_cols=122  Identities=24%  Similarity=0.316  Sum_probs=77.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      ++||+|||+++.......   .......|+..|+|||++....++.++|||||||+++|+++|..|+...... ......
T Consensus       151 ~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-~~~~~~  226 (285)
T d1fmka3         151 VCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQ  226 (285)
T ss_dssp             CEEECCCCTTC-----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHH
T ss_pred             cEEEcccchhhhccCCCc---eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-HHHHHH
Confidence            689999999987643311   1222346899999999998888999999999999999999976665332111 111111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~  154 (163)
                      +.....        .    ..+               ......+.+|+.+||+.||++|||+++|++.|++..
T Consensus       227 i~~~~~--------~----~~~---------------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         227 VERGYR--------M----PCP---------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             HHTTCC--------C----CCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             HHhcCC--------C----CCC---------------cccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            111100        0    000               012334678999999999999999999999888754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.3e-23  Score=141.40  Aligned_cols=116  Identities=19%  Similarity=0.216  Sum_probs=80.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+|++|||+++.....     .......|++.|+|||++.+..++.++||||+||+++++++|+.||.+.....  ....
T Consensus       155 ~vkl~DfG~a~~~~~~-----~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~  227 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFG-----NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLAN  227 (293)
T ss_dssp             CEEECCCTTCEECTTS-----CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH
T ss_pred             ceEecchhhhhhcCCC-----ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH--HHHH
Confidence            4899999999876432     12233568999999999988889999999999999999999999996532111  1111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +..... ....                       .........+.+|+.+||+.||++|||++|+++
T Consensus       228 i~~~~~-~~~~-----------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         228 VSAVNY-EFED-----------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHTTCC-CCCH-----------------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHhcCC-CCCc-----------------------hhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111000 0000                       000112234678999999999999999999986

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.86  E-value=3.4e-23  Score=146.74  Aligned_cols=117  Identities=23%  Similarity=0.263  Sum_probs=80.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...     .......||+.|+|||++.+..++.++||||+||++++|++|+.||.+....  .....
T Consensus       164 ~vkL~DFG~a~~~~~~-----~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~  236 (350)
T d1koaa2         164 ELKLIDFGLTAHLDPK-----QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRN  236 (350)
T ss_dssp             CEEECCCTTCEECCTT-----SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             eEEEeecchheecccc-----cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4899999999876432     2223457899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      +..... ..    ....                   .......+.+|+.+||+.||++|||++|+++.
T Consensus       237 i~~~~~-~~----~~~~-------------------~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         237 VKSCDW-NM----DDSA-------------------FSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHTCC-CS----CCGG-------------------GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHhCCC-CC----Cccc-------------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            110000 00    0000                   00112346788999999999999999999873

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.4e-23  Score=143.11  Aligned_cols=124  Identities=23%  Similarity=0.343  Sum_probs=85.0

Q ss_pred             CceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCC-CCCccccccCcchH
Q 031224            1 MTAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGK-RPTSDIFAEGLDLH   79 (163)
Q Consensus         1 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~-~p~~~~~~~~~~~~   79 (163)
                      .++||+|||+++.+.....  ........|++.|++||.+.+..++.++|+|||||+++|+++|. .||.+....  ...
T Consensus       170 ~~~Kl~DFGla~~~~~~~~--~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~--~~~  245 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVL  245 (308)
T ss_dssp             CCEEECCTTCCCGGGGGGC--EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHH
T ss_pred             ceEEEeecccceeccCCcc--eeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH--HHH
Confidence            3689999999987644321  12223346889999999998888999999999999999999985 666442111  111


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKS  155 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~  155 (163)
                      ..+           .+........                .+...+.+++.+||+.||++|||+++|++.|++..+
T Consensus       246 ~~i-----------~~~~~~~~p~----------------~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         246 RFV-----------MEGGLLDKPD----------------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HHH-----------HTTCCCCCCT----------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHH-----------HhCCCCCCcc----------------cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            111           1111100000                123457889999999999999999999999887543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.1e-23  Score=143.40  Aligned_cols=115  Identities=14%  Similarity=0.208  Sum_probs=77.2

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.+.....  .......+||+.|+|||++.+..++.++||||+||+++++++|+.||.+....  .....
T Consensus       146 ~vkl~DFG~a~~~~~~~~--~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~~~  221 (288)
T d1uu3a_         146 HIQITDFGTAKVLSPESK--QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQK  221 (288)
T ss_dssp             CEEECCCTTCEECC------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             eEEecccccceecccCCc--ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH--HHHHH
Confidence            579999999987643211  11223457999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +..           ...  ..+.               .....+.+|+.+||+.||++|||++|+++
T Consensus       222 i~~-----------~~~--~~p~---------------~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         222 IIK-----------LEY--DFPE---------------KFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHT-----------TCC--CCCT---------------TCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             HHc-----------CCC--CCCc---------------cCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            110           000  0000               11233578999999999999999998754

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.84  E-value=1.6e-22  Score=143.37  Aligned_cols=116  Identities=20%  Similarity=0.204  Sum_probs=80.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...     .......|++.|+|||++.+..++.++||||+||++++|++|+.||.+....  .....
T Consensus       167 ~vkL~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~  239 (352)
T d1koba_         167 SVKIIDFGLATKLNPD-----EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQN  239 (352)
T ss_dssp             CEEECCCTTCEECCTT-----SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHH
T ss_pred             eEEEeecccceecCCC-----CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            4799999999887542     1223356899999999999888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +......     +.....                   ......+.+|+.+||+.||++|||+.|+++
T Consensus       240 i~~~~~~-----~~~~~~-------------------~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         240 VKRCDWE-----FDEDAF-------------------SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHHCCCC-----CCSSTT-------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHhCCCC-----CCcccc-------------------cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1110000     000000                   011234678999999999999999999986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.84  E-value=3e-22  Score=142.53  Aligned_cols=114  Identities=17%  Similarity=0.215  Sum_probs=78.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+|+.+...      .....+||+.|+|||++... .|+.++||||+||++++|++|+.||.+.....  ...
T Consensus       145 ~iKl~DFGla~~~~~~------~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~  216 (364)
T d1omwa3         145 HVRISDLGLACDFSKK------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHE  216 (364)
T ss_dssp             CEEECCCTTCEECSSS------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC--HHH
T ss_pred             cEEEeeeceeeecCCC------cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH--HHH
Confidence            5899999999876432      12235799999999998654 58999999999999999999999997642221  111


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~  148 (163)
                      ........      ...+..                   .....+.+|+.+||+.||++|||     ++|+++
T Consensus       217 ~~~~~~~~------~~~~~~-------------------~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         217 IDRMTLTM------AVELPD-------------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHHHSSSC------CCCCCS-------------------SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHHhcccC------CCCCCC-------------------CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            11111000      000000                   11233678999999999999999     688875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.83  E-value=9.2e-22  Score=136.35  Aligned_cols=134  Identities=17%  Similarity=0.142  Sum_probs=89.1

Q ss_pred             ceeecccccccccCccccC---CCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcch
Q 031224            2 TAHVGDFGLTRFIPEAIRS---NQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDL   78 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~   78 (163)
                      .+||+|||+|+.+......   .........||+.|+|||.+.+..++.++|+||||++++|+++|+.||.+........
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~  223 (293)
T d1csna_         144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  223 (293)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             ceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHH
Confidence            4799999999986543111   1122334579999999999988889999999999999999999999997543221111


Q ss_pred             HHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHhHHHH
Q 031224           79 HNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTL  157 (163)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~l~~~~~~~  157 (163)
                        ................ +                   ....+..+..++..|+..+|++||+++.+.+.|+++.+..
T Consensus       224 --~~~~i~~~~~~~~~~~-l-------------------~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         224 --KYERIGEKKQSTPLRE-L-------------------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             --HHHHHHHHHHHSCHHH-H-------------------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             --HHHHHHhccCCCChHH-h-------------------cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence              0000000000000000 0                   0012345778889999999999999999998888876654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.5e-21  Score=136.34  Aligned_cols=113  Identities=17%  Similarity=0.205  Sum_probs=79.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+|+.....    .......+||+.|+|||++.+..|+.++|+||+||+++||++|+.||.+....  .+...
T Consensus       143 ~vkl~DFG~a~~~~~~----~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~--~~~~~  216 (337)
T d1o6la_         143 HIKITDFGLCKEGISD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFEL  216 (337)
T ss_dssp             CEEECCCTTCBCSCCT----TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEEeecccccccccC----CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH--HHHHH
Confidence            5799999999875432    22233468999999999999989999999999999999999999999763211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~  148 (163)
                      +...           .+.  .+.               .....+.+|+.+||+.||++|++     ++|+++
T Consensus       217 i~~~-----------~~~--~p~---------------~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         217 ILME-----------EIR--FPR---------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHC-----------CCC--CCT---------------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HhcC-----------CCC--CCc---------------cCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            1100           000  000               11233567899999999999995     788876

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.83  E-value=5.2e-22  Score=136.60  Aligned_cols=126  Identities=24%  Similarity=0.350  Sum_probs=77.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .++++|||.++........ .......+||+.|+|||++.+..++.++||||+||+++++++|+.||.+...... ....
T Consensus       149 ~~~l~d~~~~~~~~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~~  226 (277)
T d1o6ya_         149 AVKVMDFGIARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQH  226 (277)
T ss_dssp             CEEECCCTTCEECC-----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHH
T ss_pred             cceeehhhhhhhhcccccc-ccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH-HHHH
Confidence            4688999998765432111 1223345799999999999888899999999999999999999999965321110 0001


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-CHHHHHHHHHHhH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-DISDVVNNLQKVK  154 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-s~~~v~~~l~~~~  154 (163)
                      +....  .......+                       .....+.+++.+||+.||++|| |++++++.|..++
T Consensus       227 ~~~~~--~~~~~~~~-----------------------~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         227 VREDP--IPPSARHE-----------------------GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HHCCC--CCGGGTSS-----------------------SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HhcCC--CCCchhcc-----------------------CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            10000  00000000                       1123467899999999999999 8999999888775

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1.1e-21  Score=138.91  Aligned_cols=110  Identities=16%  Similarity=0.151  Sum_probs=78.6

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.+...       .....||+.|+|||++.+..++.++||||+||+++++++|+.||.+....  .....
T Consensus       179 ~ikL~DFG~a~~~~~~-------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~  249 (350)
T d1rdqe_         179 YIQVTDFGFAKRVKGR-------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QIYEK  249 (350)
T ss_dssp             CEEECCCTTCEECSSC-------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             CEEeeeceeeeecccc-------cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH--HHHHH
Confidence            5899999999876432       22357999999999999888999999999999999999999999653111  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~  148 (163)
                      +...           ...  .+.               .....+.+|+.+||+.||.+|+     |++++++
T Consensus       250 i~~~-----------~~~--~p~---------------~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         250 IVSG-----------KVR--FPS---------------HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHC-----------CCC--CCT---------------TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HhcC-----------CCC--CCc---------------cCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            1110           000  000               1123467899999999999994     8999986

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=2e-21  Score=135.92  Aligned_cols=111  Identities=21%  Similarity=0.278  Sum_probs=79.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....       ....+||+.|+|||++.+..|+.++||||+||++++|++|+.||.+....  .....
T Consensus       142 ~vkL~DFG~a~~~~~~-------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~  212 (316)
T d1fota_         142 HIKITDFGFAKYVPDV-------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--KTYEK  212 (316)
T ss_dssp             CEEECCCSSCEECSSC-------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHH
T ss_pred             CEEEecCccceEeccc-------cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH--HHHHH
Confidence            5899999999876432       22357999999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCC-----CHHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERM-----DISDVVNN  149 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~v~~~  149 (163)
                      +.           .....  .+.               .....+.+++.+||+.||.+|+     |+++++++
T Consensus       213 i~-----------~~~~~--~p~---------------~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         213 IL-----------NAELR--FPP---------------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             HH-----------HCCCC--CCT---------------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HH-----------cCCCC--CCC---------------CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            11           00000  000               1123356789999999999996     89998763

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.7e-22  Score=135.78  Aligned_cols=105  Identities=21%  Similarity=0.339  Sum_probs=75.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCC-ccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRV-STYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~-~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....      ......||+.|+|||++.+..+ +.++||||+||+++++++|+.||....       .
T Consensus       149 ~vkl~DFG~a~~~~~~------~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-------~  215 (273)
T d1xwsa_         149 ELKLIDFGSGALLKDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------E  215 (273)
T ss_dssp             EEEECCCTTCEECCSS------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H
T ss_pred             eEEECccccceecccc------cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-------H
Confidence            5799999999875432      1234579999999999877664 567899999999999999999996421       0


Q ss_pred             HHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ......      .+.+                       .....+.+|+.+||+.||++|||++|+++
T Consensus       216 i~~~~~------~~~~-----------------------~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         216 IIRGQV------FFRQ-----------------------RVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHCCC------CCSS-----------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             Hhhccc------CCCC-----------------------CCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            000000      0000                       01133577899999999999999999987

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3e-21  Score=134.01  Aligned_cols=139  Identities=17%  Similarity=0.130  Sum_probs=82.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.....    ........|++.|+|||.+.... ++.++|+||+||+++++++|+.||.+..... .+..
T Consensus       140 ~~kl~DFG~a~~~~~~----~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~  214 (298)
T d1gz8a_         140 AIKLADFGLARAFGVP----VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFR  214 (298)
T ss_dssp             CEEECSTTHHHHHCCC----SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred             cceeccCCcceeccCC----cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHH
Confidence            5799999999876432    12223457899999999877666 5788999999999999999999997543211 1111


Q ss_pred             HHHh--cCchhhhhhhc--cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVKN--ALPEQISEVLD--PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ....  ...........  +......+........    .........+.+|+.+||+.||++|||++|+++.
T Consensus       215 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         215 IFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS----KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHH----HHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhcCCCchhhccccccccccccccccccccchh----hhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            1110  00000000000  0000000000000101    1111223456789999999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=7.4e-21  Score=134.75  Aligned_cols=139  Identities=17%  Similarity=0.145  Sum_probs=81.9

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++.+....     ......|+..|+|||.+.+. .++.++||||+||+++|+++|+.||....... .+..
T Consensus       161 ~~kl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~-~l~~  234 (350)
T d1q5ka_         161 VLKLCDFGSAKQLVRGE-----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVE  234 (350)
T ss_dssp             CEEECCCTTCEECCTTS-----CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHH
T ss_pred             ceeEecccchhhccCCc-----ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH-HHHH
Confidence            57999999998764321     22235789999999987654 58999999999999999999999996532211 1111


Q ss_pred             HHH---hcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 FVK---NALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      ...   ......+............+...........   .......+.+|+.+||..||++|||+.|+++.
T Consensus       235 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         235 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVF---RPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             HHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTS---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHhCCChHHhhhhhccchhhccccccccCchhhhc---ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111   1111111111111111111100000000000   01123346789999999999999999999863

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.2e-21  Score=135.90  Aligned_cols=113  Identities=22%  Similarity=0.372  Sum_probs=79.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....    ........||+.|+|||++.+..++.++||||+||+++++++|+.||.+....  .....
T Consensus       141 ~~kl~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~  214 (320)
T d1xjda_         141 HIKIADFGMCKENMLG----DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHS  214 (320)
T ss_dssp             CEEECCCTTCBCCCCT----TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred             ceeccccchhhhcccc----cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            5799999999875432    12223457999999999999989999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH-HHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDIS-DVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~v~~  148 (163)
                      +...         .+.+..                   .....+.+|+.+||+.||++|||+. ++++
T Consensus       215 i~~~---------~~~~p~-------------------~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         215 IRMD---------NPFYPR-------------------WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHHC---------CCCCCT-------------------TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHcC---------CCCCCc-------------------cCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            1100         000000                   1123467899999999999999985 6753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.3e-21  Score=137.17  Aligned_cols=136  Identities=19%  Similarity=0.212  Sum_probs=80.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||+++.....       .....|++.|+|||++.+.. ++.++||||+||+++++++|+.||.+..... .+..
T Consensus       159 ~~kl~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~-~~~~  230 (346)
T d1cm8a_         159 ELKILDFGLARQADSE-------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKE  230 (346)
T ss_dssp             CEEECCCTTCEECCSS-------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred             ccccccccceeccCCc-------cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH-HHHH
Confidence            5799999999876432       23457899999999887644 6889999999999999999999996542211 0100


Q ss_pred             H--HHhcCchhhhhhhcc----ccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 F--VKNALPEQISEVLDP----LFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 ~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                      .  .....+.........    ......+...........    ......+.+|+.+||..||++|||+.|+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         231 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASIL----TNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             HHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTC----TTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhc----cCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0  000111110000000    000000000000000000    0112345789999999999999999999874

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=3.5e-21  Score=132.93  Aligned_cols=138  Identities=17%  Similarity=0.169  Sum_probs=77.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||.+......    ........|++.|++||.+.+.. ++.++|+||+||+++|+++|+.||.+...... +..
T Consensus       138 ~~kl~DfG~a~~~~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~-~~~  212 (286)
T d1ob3a_         138 ELKIADFGLARAFGIP----VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMR  212 (286)
T ss_dssp             CEEECCTTHHHHHCC-------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH
T ss_pred             CEEecccccceecccC----ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH-HHH
Confidence            5799999999876432    11122345788999999987654 68999999999999999999999975432111 111


Q ss_pred             HHHhcC---chhhhhhhc-cccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNAL---PEQISEVLD-PLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ......   ...+..... ..............    ...........+.+|+.+||+.||++|||++|+++
T Consensus       213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP----WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCC----GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhhCCCChhhccchhhhhhcccccccccCcc----hhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111000   001100000 00000000000000    00111122345678999999999999999999975

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=9.7e-21  Score=132.64  Aligned_cols=116  Identities=22%  Similarity=0.230  Sum_probs=79.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+||+|||+++.....     .......|++.|++||...+..++.++||||+||+++++++|..||.+....  .....
T Consensus       142 ~ikl~DFG~~~~~~~~-----~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~--~~~~~  214 (321)
T d1tkia_         142 TIKIIEFGQARQLKPG-----DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIEN  214 (321)
T ss_dssp             CEEECCCTTCEECCTT-----CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHH
T ss_pred             EEEEcccchhhccccC-----CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence            5799999999876432     1223356899999999998888999999999999999999999999653211  11111


Q ss_pred             HHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      +..... .+    +.                   .........+.+|+.+||..||++|||+.|+++
T Consensus       215 i~~~~~-~~----~~-------------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         215 IMNAEY-TF----DE-------------------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHTCC-CC----CH-------------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHhCCC-CC----Ch-------------------hhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111000 00    00                   000011234678999999999999999999987

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.79  E-value=1.3e-20  Score=129.41  Aligned_cols=116  Identities=16%  Similarity=0.206  Sum_probs=77.8

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCC------CCCCccccceehhhHHHHHHHhCCCCCccccccC
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGM------GSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG   75 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~------~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~   75 (163)
                      .+||+|||+++.+....     ......||..|++||.+.      ...++.++||||+||+++++++|+.||.+.... 
T Consensus       148 ~~kl~DFG~a~~~~~~~-----~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~-  221 (277)
T d1phka_         148 NIKLTDFGFSCQLDPGE-----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-  221 (277)
T ss_dssp             CEEECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-
T ss_pred             CeEEccchheeEccCCC-----ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH-
Confidence            57999999998875431     223457899999999874      234688999999999999999999999753211 


Q ss_pred             cchHHHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           76 LDLHNFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                       .....+..           .......+             ........+.+|+.+||+.||++|||++|+++
T Consensus       222 -~~~~~i~~-----------~~~~~~~~-------------~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         222 -LMLRMIMS-----------GNYQFGSP-------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             -HHHHHHHH-----------TCCCCCTT-------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             -HHHHHHHh-----------CCCCCCCc-------------ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence             11111111           00000000             00012234678999999999999999999875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1e-20  Score=133.73  Aligned_cols=138  Identities=15%  Similarity=0.128  Sum_probs=82.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCC-CCccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGS-RVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~-~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+++........ .......+|++.|+|||++... .++.++||||+||+++++++|+.||.+..........
T Consensus       147 ~~kl~DfG~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~  225 (345)
T d1pmea_         147 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI  225 (345)
T ss_dssp             CEEECCCTTCEECCGGGCB-CCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CEEEcccCceeeccCCCcc-ceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHH
Confidence            5799999999876543222 1223346789999999998554 4788999999999999999999999764321110000


Q ss_pred             -HHHhcCch---------hhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHHH
Q 031224           81 -FVKNALPE---------QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVNN  149 (163)
Q Consensus        81 -~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~~  149 (163)
                       ........         ........     .+...........    ......+.+|+.+||+.||++|||++|+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         226 LGILGSPSQEDLNCIINLKARNYLLS-----LPHKNKVPWNRLF----PNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHCSCCHHHHHTCCCHHHHHHHHT-----SCCCCCCCHHHHC----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhccCCChhhhhhhhhhhhhccccc-----CCccCCCCHHHhC----CCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             00000000         00000000     0000000000000    1112346789999999999999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.3e-20  Score=129.02  Aligned_cols=140  Identities=19%  Similarity=0.115  Sum_probs=79.0

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||.++.......    ......++..|++||++.... ++.++||||+||+++|+++|+.||.........+..
T Consensus       139 ~~kl~DFG~a~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~  214 (292)
T d1unla_         139 ELKLANFGLARAFGIPVR----CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_dssp             CEEECCCTTCEECCSCCS----CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH
T ss_pred             ceeeeecchhhcccCCCc----cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHH
Confidence            579999999987654321    122235678899999887665 688999999999999999999987542211111111


Q ss_pred             HHHhcC--ch-hhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNAL--PE-QISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ......  .. .+.................   ..............+.+|+.+||+.||.+||||+|+++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         215 IFRLLGTPTEEQWPSMTKLPDYKPYPMYPA---TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHCCCCTTTCTTGGGSTTCCCCCCCCT---TCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHhhcCCCChhhhhhhhhcccccccccccc---cchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111000  00 1100000000000000000   00000011122334678899999999999999999976

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.77  E-value=4.6e-20  Score=129.55  Aligned_cols=142  Identities=15%  Similarity=0.091  Sum_probs=81.1

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+||+|||+|+.....     .......+|+.|+|||.+.+.. ++.++|+||+||+++++++|+.||............
T Consensus       168 ~vkl~DFG~a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~  242 (328)
T d3bqca1         168 KLRLIDWGLAEFYHPG-----QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR  242 (328)
T ss_dssp             EEEECCGGGCEECCTT-----CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred             eeeecccccceeccCC-----CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHH
Confidence            4799999999876432     1223456899999999987654 789999999999999999999998653221111111


Q ss_pred             HHHhcCchhhhhhh-------ccccccCCCC-CCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKNALPEQISEVL-------DPLFVTGGEE-GEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..............       .+........ ....................+.+|+.+||..||.+|||++|+++
T Consensus       243 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            10000000000000       0000000000 00000000000011112345678999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.1e-19  Score=128.97  Aligned_cols=142  Identities=15%  Similarity=0.099  Sum_probs=77.3

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccCcchHHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHNF   81 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~~   81 (163)
                      .+|++|||+++.....     ......++|+.|+|||++.+..++.++||||+||+++++++|+.||.+...... ....
T Consensus       157 ~~kl~df~~~~~~~~~-----~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~-~~~i  230 (355)
T d2b1pa1         157 TLKILDFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKV  230 (355)
T ss_dssp             CEEECCCCC--------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH
T ss_pred             ceeeechhhhhccccc-----cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHH-HHHH
Confidence            4689999998865432     223345789999999999988899999999999999999999999965321110 0000


Q ss_pred             HH----------hcCchhhhhhhccccccCCCCC---CCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           82 VK----------NALPEQISEVLDPLFVTGGEEG---EGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        82 ~~----------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      ..          ......................   ...................+.+|+.+||..||++||||+|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            00          0011111111111110000000   0000000011122334556788999999999999999999986


Q ss_pred             H
Q 031224          149 N  149 (163)
Q Consensus       149 ~  149 (163)
                      .
T Consensus       311 H  311 (355)
T d2b1pa1         311 H  311 (355)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.4e-19  Score=126.70  Aligned_cols=118  Identities=19%  Similarity=0.302  Sum_probs=77.7

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC--CccccceehhhHHHHHHHhCCCCCccccccCcchH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR--VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLH   79 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~--~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~   79 (163)
                      .+||+|||+++.+.....   .......|++.|++||.+.+..  ++.++||||+||+++++++|+.||........ ..
T Consensus       167 ~vkL~DFG~a~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~  242 (322)
T d1vzoa_         167 HVVLTDFGLSKEFVADET---ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QA  242 (322)
T ss_dssp             CEEESCSSEEEECCGGGG---GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HH
T ss_pred             CEEEeeccchhhhccccc---ccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HH
Confidence            579999999987644321   1223356899999999886543  67889999999999999999999976433221 11


Q ss_pred             HHHHhcCchhhhhhhccccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCC-----HHHHHH
Q 031224           80 NFVKNALPEQISEVLDPLFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMD-----ISDVVN  148 (163)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~v~~  148 (163)
                      .........      .+.+..                   .....+.+|+.+||+.||++|||     ++|+++
T Consensus       243 ~i~~~~~~~------~~~~~~-------------------~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         243 EISRRILKS------EPPYPQ-------------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHHHHHC------CCCCCT-------------------TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHHhcccC------CCCCcc-------------------cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            111110000      000000                   12344678999999999999994     788876

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=4.2e-19  Score=125.97  Aligned_cols=140  Identities=18%  Similarity=0.162  Sum_probs=82.1

Q ss_pred             eeecccccccccCccccCCCcccccccccccccCCCCCCCCCCccccceehhhHHHHHHHhCCCCCccccccC-cchHHH
Q 031224            3 AHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSRVSTYGDVYSYGILLLETFTGKRPTSDIFAEG-LDLHNF   81 (163)
Q Consensus         3 ~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~-~~~~~~   81 (163)
                      ++++|||.++....       .....+|++.|+|||++....++.++|+||+||+++++++|+.||....... ......
T Consensus       171 ~kl~dfg~s~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~  243 (362)
T d1q8ya_         171 IKIADLGNACWYDE-------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  243 (362)
T ss_dssp             EEECCCTTCEETTB-------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             eeEeeccccccccc-------ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHH
Confidence            78999999876532       1233568999999999988889999999999999999999999996532211 010000


Q ss_pred             ------HHhcCchhh-------hhhhc-cccccCCCCCCCchhh---hhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHH
Q 031224           82 ------VKNALPEQI-------SEVLD-PLFVTGGEEGEGTAEE---KLKQDQVQESLATILKIGVACSVESPRERMDIS  144 (163)
Q Consensus        82 ------~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  144 (163)
                            .....+...       ...++ ................   .............+.+|+.+||..||.+|||++
T Consensus       244 ~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~  323 (362)
T d1q8ya_         244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  323 (362)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHH
Confidence                  001111100       00000 0000011110000000   011112345567789999999999999999999


Q ss_pred             HHHHH
Q 031224          145 DVVNN  149 (163)
Q Consensus       145 ~v~~~  149 (163)
                      |+++.
T Consensus       324 e~L~H  328 (362)
T d1q8ya_         324 GLVNH  328 (362)
T ss_dssp             HHHTC
T ss_pred             HHhcC
Confidence            99863

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.4e-19  Score=128.01  Aligned_cols=134  Identities=13%  Similarity=0.152  Sum_probs=75.4

Q ss_pred             ceeecccccccccCccccCCCcccccccccccccCCCCCCCCC-CccccceehhhHHHHHHHhCCCCCccccccCcchHH
Q 031224            2 TAHVGDFGLTRFIPEAIRSNQSSSIGLKGTVGYAPPEYGMGSR-VSTYGDVYSYGILLLETFTGKRPTSDIFAEGLDLHN   80 (163)
Q Consensus         2 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~g~~~y~~pe~~~~~~-~~~~~di~s~g~~~~e~~~g~~p~~~~~~~~~~~~~   80 (163)
                      .+|++|||++.....       ......|+..|+|||...+.. ++.++|+||+||+++++++|+.||.+.....  ...
T Consensus       159 ~~kl~dfg~a~~~~~-------~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~--~~~  229 (348)
T d2gfsa1         159 ELKILDFGLARHTDD-------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID--QLK  229 (348)
T ss_dssp             CEEECCC----CCTG-------GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHH
T ss_pred             cccccccchhcccCc-------ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHH--HHH
Confidence            478999999876532       223356899999999876655 6889999999999999999999996532211  111


Q ss_pred             HHHh---cCchhhhhhhcc----ccccCCCCCCCchhhhhhhHhhHHHHHHHHHHHhhcCCCCcCCCCCHHHHHH
Q 031224           81 FVKN---ALPEQISEVLDP----LFVTGGEEGEGTAEEKLKQDQVQESLATILKIGVACSVESPRERMDISDVVN  148 (163)
Q Consensus        81 ~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v~~  148 (163)
                      .+..   ............    .................    .......+.+|+.+||..||.+|||++|+++
T Consensus       230 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         230 LILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV----FIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHH----STTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhh----cCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            1100   000000000000    00000000000000000    0112344678999999999999999999987