BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031226
(163 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 139 DGDGNVNFEEFRSMMTT 155
DGDG VN+EEF +MMTT
Sbjct: 132 DGDGQVNYEEFVTMMTT 148
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 77 FETICRT 83
F T+ T
Sbjct: 142 FVTMMTT 148
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 106 bits (264), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D DG I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADGDG ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 105 bits (263), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D DG I EF T
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 371 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 430
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 431 DGDGQVNYEEFVQMMT 446
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ +EL V+ L
Sbjct: 280 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 339
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI VDADGDG ++F EF +MM +K
Sbjct: 340 GQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 377
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 77 F 77
F
Sbjct: 441 F 441
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 105 bits (263), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D DG I EF T
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 371 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 430
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 431 DGDGQVNYEEFVQMMT 446
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADGDG ++F EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 370 TMMARKMK 377
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 77 F 77
F
Sbjct: 441 F 441
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D DG I EF T
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 371 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 430
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 431 DGDGQVNYEEFVQMMT 446
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADGDG ++F EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 370 TMMARKMK 377
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 77 F 77
F
Sbjct: 441 F 441
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D DG I EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 371
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 372 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ +EL V+ L
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI VDADGDG ++F EF +MM +K
Sbjct: 341 GQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 378
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 77 F 77
F
Sbjct: 442 F 442
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 139 DGDGNVNFEEFRSMMTTSL 157
DGDG VN+EEF MMT L
Sbjct: 132 DGDGQVNYEEFVQMMTAKL 150
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 139 DGDGNVNFEEFRSMMTT 155
DGDG VN+EEF +MMT+
Sbjct: 132 DGDGQVNYEEFVTMMTS 148
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 77 FETIC 81
F T+
Sbjct: 142 FVTMM 146
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 139 DGDGNVNFEEFRSMMTT 155
DGDG VN+EEF +MMT+
Sbjct: 131 DGDGQVNYEEFVTMMTS 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 77 FETIC 81
F T+
Sbjct: 141 FVTMM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF +MMT
Sbjct: 131 DGDGQVNYEEFVTMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 77 FETIC 81
F T+
Sbjct: 141 FVTMM 145
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDI 131
Query: 139 DGDGNVNFEEFRSMMTT 155
DGDG VN+EEF +MMT+
Sbjct: 132 DGDGQVNYEEFVTMMTS 148
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEE 141
Query: 77 FETIC 81
F T+
Sbjct: 142 FVTMM 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 77 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 136
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 137 DGDGQVNYEEFVQMMT 152
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 76 TMMARKMK 83
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 87 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 146
Query: 77 F 77
F
Sbjct: 147 F 147
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 73 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 132
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 133 DGDGQVNYEEFVQMMT 148
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 71
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 72 TMMARKMK 79
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 83 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 142
Query: 77 F 77
F
Sbjct: 143 F 143
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 74
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 75 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 134
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 135 DGDGQVNYEEFVQMMT 150
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 14 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 73
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 74 TMMARKMK 81
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 85 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 144
Query: 77 F 77
F
Sbjct: 145 F 145
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 372 MMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ +EL V+ L
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI VDADG+G ++F EF +MM +K
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMK 378
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 77 F 77
F
Sbjct: 442 F 442
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 335 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 394
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 395 DGDGQVNYEEFVQMMT 410
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ +EL V+ L
Sbjct: 244 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 303
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI VDADG+G ++F EF +MM +K
Sbjct: 304 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 341
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 345 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 404
Query: 77 F 77
F
Sbjct: 405 F 405
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADI 131
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ +++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 67 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 126
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 127 DGDGQVNYEEFVQMMT 142
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 66 TMMARKMK 73
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 77 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 136
Query: 77 F 77
F
Sbjct: 137 F 137
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ +EL V+ L
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI VDADG+G ++F EF +MM +K
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 77 F 77
F
Sbjct: 442 F 442
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 68 TMMARKMK 75
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 77 F 77
F
Sbjct: 139 F 139
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 68 TMMARKMK 75
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 77 F 77
F
Sbjct: 139 F 139
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 68 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 127
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 128 DGDGQVNYEEFVQMMT 143
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 67 TMMARKMK 74
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 78 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 137
Query: 77 F 77
F
Sbjct: 138 F 138
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ +EL V+ L
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI VDADG+G ++F EF +MM +K
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 77 F 77
F
Sbjct: 442 F 442
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 338 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 397
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 398 DGDGQVNYEEFVQMMT 413
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 337 TMMARKMK 344
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 77 F 77
F
Sbjct: 408 F 408
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 373 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 432
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 433 DGDGQVNYEEFVQMMT 448
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ +EL V+ L
Sbjct: 282 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 341
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI VDADG+G ++F EF +MM +K
Sbjct: 342 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 379
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 442
Query: 77 F 77
F
Sbjct: 443 F 443
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 70 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 129
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 130 DGDGQVNYEEFVQMMT 145
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 69 TMMARKMK 76
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 80 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 139
Query: 77 F 77
F
Sbjct: 140 F 140
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 338 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 397
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 398 DGDGQVNYEEFVQMMT 413
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 337 TMMARKMK 344
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 77 F 77
F
Sbjct: 408 F 408
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 68 TMMARKMK 75
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 77 F 77
F
Sbjct: 139 F 139
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 372 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ +EL V+ L
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI VDADG+G ++F EF +MM +K
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 77 F 77
F
Sbjct: 442 F 442
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D DG I EF
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLI 362
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 363 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 422
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 423 DGDGQVNYEEFVQMMT 438
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADGDG ++F EF
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 361
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 362 IMMARKMK 369
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 432
Query: 77 F 77
F
Sbjct: 433 F 433
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 102 bits (255), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ + E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D D
Sbjct: 71 MMARKMKDS-EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 140 GDGNVNFEEFRSMMTT 155
GDG VN+EEF +MMT+
Sbjct: 130 GDGQVNYEEFVTMMTS 145
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 79 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 77 FETIC 81
F T+
Sbjct: 139 FVTMM 143
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 102 bits (254), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANI 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + + D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG + + MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADI 131
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 71 TMMARKMK 78
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG ISA EL V+ LG + + MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADI 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 15 IVSREEM---QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGF 71
I+S E++ ++ F FD + DG I++ ELATV++S+ + EEEL ++ ++D D +G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 72 ISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV 130
I EF ++ + E EL+EAF ++D+D+NG ISA EL V+ LG K + +
Sbjct: 63 IEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVE 122
Query: 131 AMIKPVDADGDGNVNFEEFRSMMTT 155
MIK D DGDG VN+EEF MM T
Sbjct: 123 QMIKEADLDGDGQVNYEEFVKMMMT 147
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+ +EAF L+D+D +G I+ EEL V+ L + + MI VDADG+G + F+EF
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFL 69
Query: 151 SMMTTSLKPGPA 162
S+M +K A
Sbjct: 70 SLMAKKVKDTDA 81
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL EAF ++D+D NGLISA EL V+ LG K + D MI+ D
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 139 DGDGNVNFEEFRSMMTT 155
DGDG++N+EEF MM +
Sbjct: 131 DGDGHINYEEFVRMMVS 147
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
S+M +K
Sbjct: 70 SLMARKMK 77
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ + F FD + +G IS EL V+ ++G ++E+ ++ + D D DG I+ E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL EAF ++D+D NGLISA EL V+ LG K + D MI+ D
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 139 DGDGNVNFEEFRSMMTT 155
DGDG++N+EEF MM +
Sbjct: 131 DGDGHINYEEFVRMMVS 147
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
S+M +K
Sbjct: 70 SLMARKMK 77
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ + F FD + +G IS EL V+ ++G ++E+ ++ + D D DG I+ E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F+ FD + DG I+ EL TV++S+G + E EL +M ++D D +G + EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++D+D NG +SA EL V+ RLG K S + MI+ D
Sbjct: 71 MMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADT 130
Query: 139 DGDGNVNFEEFRSMMTT 155
DGDG VN+EEF ++ +
Sbjct: 131 DGDGQVNYEEFVRVLVS 147
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E +EAF L+D+D +G I+ EL V+ LG + M+ +D DG+G V+F EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 152 MMTTSLK 158
MM +K
Sbjct: 71 MMARKMK 77
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
EE+++ F FD + +G +S EL V+ +G +EE+ ++ DTD DG ++ EF
Sbjct: 83 EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 141
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 80/135 (59%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ E+REAF ++D+D NG ISA EL V+ LG K + + MI+ + D
Sbjct: 67 MMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANID 126
Query: 140 GDGNVNFEEFRSMMT 154
GDG VN+EEF MMT
Sbjct: 127 GDGQVNYEEFVQMMT 141
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 66 TMMARKMK 73
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 11 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDG 70
RK EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + + D DG
Sbjct: 70 RKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDG 129
Query: 71 FISLSEF 77
++ EF
Sbjct: 130 QVNYEEF 136
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 99.4 bits (246), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL+EAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 68 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 127
Query: 139 DGDGNVNFEEFRSMM 153
DGDG VN+EEF +M
Sbjct: 128 DGDGQVNYEEFVQVM 142
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 151 SMMTTSLK 158
++M +K
Sbjct: 67 NLMARKMK 74
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 78 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 137
Query: 77 F 77
F
Sbjct: 138 F 138
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 99.4 bits (246), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL+EAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 71 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 139 DGDGNVNFEEFRSMM 153
DGDG VN+EEF +M
Sbjct: 131 DGDGQVNYEEFVQVM 145
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
++M +K
Sbjct: 70 NLMARKMK 77
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 81 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL+EAF ++D+D+NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 139 DGDGNVNFEEFRSMM 153
DGDG +N+EEF +M
Sbjct: 132 DGDGQINYEEFVKVM 146
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+E +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
++M +K
Sbjct: 71 NLMARKMK 78
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD +++G IS EL V+ ++G +EE+ ++ + D D DG I+ E
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E +L+EAF ++D+D NG ISA EL V+ LG K + + MI+ D
Sbjct: 71 LMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 139 DGDGNVNFEEFRSMM 153
DGDG VN+EEF +M
Sbjct: 131 DGDGQVNYEEFVQVM 145
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
++M +K
Sbjct: 70 NLMARKMK 77
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEE-LNLVLNRLGI 122
D D DG I+ E T+ R+ EAEL++ + D D NG I E LNL+ ++
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD 78
Query: 123 KCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 154
S + + D DG+G ++ E R +MT
Sbjct: 79 TDSEEKLKEAFRVFDKDGNGFISAAELRHVMT 110
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S E++++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 81 SEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL+EAF ++D+D+NG ISA EL V+ LG K + + MI+ D
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 139 DGDGNVNFEEFRSMM 153
DGDG +N++EF +M
Sbjct: 132 DGDGQINYDEFVKVM 146
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+E +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMMTTSLK 158
++M +K
Sbjct: 71 NLMARKMK 78
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD +++G IS EL V+ ++G +EE+ ++ + D D DG I+ E
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV +S+G + E EL + ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 71
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
R E E+REAF ++D+D NG ISA EL V LG K + + I+ D
Sbjct: 72 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADI 131
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF T
Sbjct: 132 DGDGQVNYEEFVQXXT 147
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
AE +EAF L+D+D +G I+ +EL V LG + I VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 69
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V ++G +EE+ + + + D D DG ++ E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEE 141
Query: 77 F 77
F
Sbjct: 142 F 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV +S+G + E EL + ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
R E E+REAF ++D+D NG ISA EL V LG K + + I+ D
Sbjct: 71 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADI 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF T
Sbjct: 131 DGDGQVNYEEFVQXXT 146
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
AE +EAF L+D+D +G I+ +EL V LG + I VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 68
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V ++G +EE+ + + D D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV +S+G + E EL + ++D D +G I+ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLT 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
R E E+REAF ++D+D NG ISA EL V LG K + + I+ D
Sbjct: 71 XXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADI 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+EEF T
Sbjct: 131 DGDGQVNYEEFVQXXT 146
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
AE +EAF L+D+D +G I+ +EL V LG + I VDADG+G +NF EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF 68
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V ++G +EE+ + + D D DG ++ E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ +L TV++S+G + E EL ++ ++ D +G I +F T
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLT 371
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E E+REAF ++ +D NG ISA +L V+ LG K + + MI+
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGI 431
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG VN+E+F MMT
Sbjct: 432 DGDGQVNYEQFVQMMT 447
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 61 MEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
++ +D +DG I + E R AE +EAF L+D+D +G I+ ++L V+ L
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSL 340
Query: 121 GIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 158
G + MI V ADG+G ++F +F +MM +K
Sbjct: 341 GQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMK 378
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F F + +G IS +L V+ ++G +EE+ ++ + D DG ++ +
Sbjct: 382 SEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQ 441
Query: 77 F 77
F
Sbjct: 442 F 442
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E + F QFD GKI+ EL T+++++G + E EL ++ + + + +G ++ +EF
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCG 70
Query: 80 I-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
I + E E+REAF ++D+D +G IS EL V+ LG K + + MI+ D
Sbjct: 71 IMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADF 130
Query: 139 DGDGNVNFEEFRSMMT 154
DGDG +N+EEF M++
Sbjct: 131 DGDGMINYEEFVWMIS 146
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
+ EEM++ F FD + DG IS EL V+ ++G +EE+ ++ + D D DG I+ E
Sbjct: 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEE 140
Query: 77 F 77
F
Sbjct: 141 F 141
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F FD + +G IS +ELATV++S+G S E E+ +M ++D D + I SEF
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 71
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL EAF ++D++ +GLISA EL VL +G K + M++ V +
Sbjct: 72 LMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-S 130
Query: 139 DGDGNVNFEEFRSMMTTSLKPGP 161
DG G +N ++F ++++ G
Sbjct: 131 DGSGEINIQQFAALLSKGSSTGT 153
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D NG IS+ EL V+ LG+ S ++ +D DG+ + F EF
Sbjct: 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 70
Query: 151 SMMTTSLKP 159
++M+ LK
Sbjct: 71 ALMSRQLKS 79
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S +E+ + F FD N DG IS EL VL S+G + E+ ++ ++ +D G I++ +
Sbjct: 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQ 140
Query: 77 FETICRTSS 85
F + S
Sbjct: 141 FAALLSKGS 149
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F FD + G IS +ELATV++S+G S E E+ +M ++D D + I SEF
Sbjct: 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLA 71
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL EAF ++D++ +GLISA EL VL +G K + M++ V +
Sbjct: 72 LMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-S 130
Query: 139 DGDGNVNFEEFRSMMT 154
DG G +N ++F ++++
Sbjct: 131 DGSGEINIKQFAALLS 146
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G ISA EL V+ LG+ S ++ +D DG+ + F EF
Sbjct: 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFL 70
Query: 151 SMMTTSLK 158
++M+ LK
Sbjct: 71 ALMSRQLK 78
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S +E+ + F FD N DG IS EL VL S+G + E+ ++ ++ +D G I++ +
Sbjct: 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SDGSGEINIKQ 140
Query: 77 FETI 80
F +
Sbjct: 141 FAAL 144
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F FD + +G IS +ELATV++S+G S E E+ +M ++D D + I SEF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E EL EAF ++D++ +GLISA EL VL +G K + M++ V +
Sbjct: 71 LMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-S 129
Query: 139 DGDGNVNFEEFRSMMT 154
DG G +N ++F ++++
Sbjct: 130 DGSGEINIQQFAALLS 145
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D NG IS+ EL V+ LG+ S ++ +D DG+ + F EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 151 SMMTTSLKP 159
++M+ LK
Sbjct: 70 ALMSRQLKS 78
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S +E+ + F FD N DG IS EL VL S+G + E+ ++ ++ +D G I++ +
Sbjct: 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQ 139
Query: 77 FETIC 81
F +
Sbjct: 140 FAALL 144
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E + F+ FDA+ G IS+ EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 80 I----CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
+ + + E EL E F ++D++ +G I AEEL + G + + +++K
Sbjct: 78 MMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKD 137
Query: 136 VDADGDGNVNFEEFRSMM 153
D + DG ++F+EF MM
Sbjct: 138 GDKNNDGRIDFDEFLKMM 155
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 77 VMMVRQMK 84
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ + F FD N DG I ELA + ++ G +EE+ +M+D D + DG I E
Sbjct: 91 SEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
Query: 77 F 77
F
Sbjct: 151 F 151
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E + F+ FDA+ G IS+ EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 80 I----CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
+ + + E EL E F ++D++ +G I AEEL + G + + +++K
Sbjct: 78 MMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKD 137
Query: 136 VDADGDGNVNFEEFRSMM 153
D + DG ++F+EF MM
Sbjct: 138 GDKNNDGRIDFDEFLKMM 155
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 77 VMMVRQMK 84
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ ++F FD N DG I ELA + ++ G +EE+ +M+D D + DG I E
Sbjct: 91 SEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
Query: 77 F 77
F
Sbjct: 151 F 151
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++E+++ F+ FD + G I EL ++++G K+EE+ +++ D+D D G I E
Sbjct: 6 QKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEE 65
Query: 77 FETICRTSSGAAGEAELRE----AFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAM 132
F + + GE + RE AF L+D D+ G IS + L V LG + + M
Sbjct: 66 F---LQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEM 122
Query: 133 IKPVDADGDGNVNFEE-FRSMMTTSL 157
I D DGDG VN EE FR M TSL
Sbjct: 123 IDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E + F+ FDA+ G IS EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 80 I----CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
+ + + E EL + F ++D++ +G I EEL +L G + + ++K
Sbjct: 81 MMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 136 VDADGDGNVNFEEFRSMM 153
D + DG ++F+EF MM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 80 VMMVRQMK 87
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE++ F FD N DG I + EL +L++ G EE++ +M+D D + DG I E
Sbjct: 94 SEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 77 F 77
F
Sbjct: 154 F 154
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E + F+ FDA+ G IS EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 80 I----CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
+ + + E EL + F ++D++ +G I EEL +L G + + ++K
Sbjct: 81 MMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 136 VDADGDGNVNFEEFRSMM 153
D + DG ++F+EF MM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 80 VMMVRQMK 87
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ F FD N DG I + EL +L++ G EE++ +M+D D + DG I E
Sbjct: 94 SEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 77 F 77
F
Sbjct: 154 F 154
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E + F+ FDA+ G IS EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 80 I----CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
+ + + E EL F ++D++ +G I EEL +L G + + ++K
Sbjct: 81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 136 VDADGDGNVNFEEFRSMM 153
D + DG ++F+EF MM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 80 VMMVRQMK 87
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ F FD N DG I + EL +L++ G EE++ +M+D D + DG I E
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 77 F 77
F
Sbjct: 154 F 154
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E + F+ FDA+ G IS EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 80 I----CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
+ + + E EL F ++D++ +G I EEL +L G + + ++K
Sbjct: 78 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 137
Query: 136 VDADGDGNVNFEEFRSMM 153
D + DG ++F+EF MM
Sbjct: 138 SDKNNDGRIDFDEFLKMM 155
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 17 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 77 VMMVRQMK 84
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ F FD N DG I + EL +L++ G EE++ +M+D D + DG I E
Sbjct: 91 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 150
Query: 77 F 77
F
Sbjct: 151 F 151
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 18 REEMQKIFNQFDANKDGKISLTELA---TVLKSMGSSYKE-----EELVRVMEDLDTDKD 69
R+E+ IF + D N DG++ EL VL++ + E EE+ +++++D DK+
Sbjct: 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKN 413
Query: 70 GFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGC 129
G+I SEF ++C E LR AF+L+D DK+G I+ EEL + I S
Sbjct: 414 GYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSI--SEKTW 471
Query: 130 VAMIKPVDADGDGNVNFEEFRSMM 153
++ D + D ++F+EF SMM
Sbjct: 472 NDVLGEADQNKDNMIDFDEFVSMM 495
Score = 43.1 bits (100), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 12 KQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGF 71
KQ++ S E +++ FN FD +K GKI+ ELA + +S E+ V+ + D +KD
Sbjct: 428 KQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEADQNKDNM 485
Query: 72 ISLSEFETI 80
I EF ++
Sbjct: 486 IDFDEFVSM 494
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E + F+ FDA+ G IS EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 80 I----CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
+ + + E EL F ++D++ +G I EEL +L G + ++K
Sbjct: 81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKD 140
Query: 136 VDADGDGNVNFEEFRSMM 153
D + DG ++F+EF MM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 80 VMMVRQMK 87
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ F FD N DG I + EL +L++ G EE++ +M+D D + DG I E
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 77 F 77
F
Sbjct: 154 F 154
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF- 77
EE+++ F +FD +KDG I+ +L +++MG E EL+ + + ++ + G + +F
Sbjct: 25 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 84
Query: 78 ----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAM 132
+ ++ G ELR+AF +D + +G IS EL + + LG + +
Sbjct: 85 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI 144
Query: 133 IKPVDADGDGNVNFEEFRSMMT 154
I+ VD +GDG V+FEEF MM+
Sbjct: 145 IRDVDLNGDGRVDFEEFVRMMS 166
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 15 IVSREEMQKIFNQFDANKDGKISLTELATVL-KSMGSSYKEEELVRVMEDLDTDKDGFIS 73
++ +E++ F +FD N DG+IS +EL + K +G ++ ++ D+D + DG +
Sbjct: 98 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVD 157
Query: 74 LSEF 77
EF
Sbjct: 158 FEEF 161
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
ELREAF +D+DK+G I+ +L + +G + + + + ++ + G+V+F++F
Sbjct: 26 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 85
Query: 152 MMTTSL 157
+M L
Sbjct: 86 LMGPKL 91
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF- 77
EE+++ F +FD +KDG I+ +L +++MG E EL+ + + ++ + G + +F
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 78 ----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAM 132
+ ++ G ELR+AF +D + +G IS EL + + LG + +
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI 130
Query: 133 IKPVDADGDGNVNFEEFRSMMT 154
I+ VD +GDG V+FEEF MM+
Sbjct: 131 IRDVDLNGDGRVDFEEFVRMMS 152
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 15 IVSREEMQKIFNQFDANKDGKISLTELATVL-KSMGSSYKEEELVRVMEDLDTDKDGFIS 73
++ +E++ F +FD N DG+IS +EL + K +G ++ ++ D+D + DG +
Sbjct: 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVD 143
Query: 74 LSEF 77
EF
Sbjct: 144 FEEF 147
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
ELREAF +D+DK+G I+ +L + +G + + + + ++ + G+V+F++F
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 152 MMTTSL 157
+M L
Sbjct: 72 LMGPKL 77
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF- 77
EE+++ F +FD +KDG I+ +L +++MG E EL+ + + ++ + G + +F
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 78 ----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAM 132
+ ++ G ELR+AF +D + +G IS EL + LG + +
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEI 130
Query: 133 IKPVDADGDGNVNFEEFRSMMT 154
I+ VD +GDG V+FEEF MM+
Sbjct: 131 IRDVDLNGDGRVDFEEFVRMMS 152
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 15 IVSREEMQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFIS 73
++ +E++ F +FD N DG+IS +EL +++ +G ++ ++ D+D + DG +
Sbjct: 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVD 143
Query: 74 LSEF 77
EF
Sbjct: 144 FEEF 147
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
ELREAF +D+DK+G I+ +L + +G + + + + ++ + G+V+F++F
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 152 MMTTSL 157
+M L
Sbjct: 72 LMGPKL 77
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-E 78
E ++ F FD + +G IS +ELATV++S+G S E E+ +M ++D D + I SEF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCS 125
+ R E EL EAF ++D++ +GLISA EL VL +G K +
Sbjct: 71 LMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 117
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D NG IS+ EL V+ LG+ S ++ +D DG+ + F EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 151 SMMTTSLK 158
++M+ LK
Sbjct: 70 ALMSRQLK 77
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEEL 57
S +E+ + F FD N DG IS EL VL S+G + EL
Sbjct: 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 44/67 (65%)
Query: 89 GEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
E EL+EAF ++D+D+NG ISA EL V+ LG K + + MIK D DGDG VN+EE
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 149 FRSMMTT 155
F MM T
Sbjct: 67 FVKMMMT 73
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
+ EE+++ F FD +++G IS +EL V+ ++G +EE+ +++++ D D DG ++ E
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 77 FETICRT 83
F + T
Sbjct: 67 FVKMMMT 73
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 44/67 (65%)
Query: 89 GEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
E EL+EAF ++D+D+NG ISA EL V+ LG K + + MIK D DGDG VN+EE
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 149 FRSMMTT 155
F MM T
Sbjct: 62 FVKMMMT 68
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
+ EE+++ F FD +++G IS +EL V+ ++G +EE+ +++++ D D DG ++ E
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 77 FETICRT 83
F + T
Sbjct: 62 FVKMMMT 68
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++E+++ F+ FDA+ G I + EL ++++G K+EE+ +++ ++D + G ++ +
Sbjct: 4 QKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGD 63
Query: 77 FETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
F T+ + S + E+ +AF L+D D+ G IS + L V LG + + MI
Sbjct: 64 FLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 123
Query: 136 VDADGDGNVNFEEFRSMM 153
D DGDG V+ +EF +M
Sbjct: 124 ADRDGDGEVSEQEFLRIM 141
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E+REAFDL+D D G I +EL + + LG + + MI +D +G G +NF +F +
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 152 MMTTSL 157
+MT +
Sbjct: 67 VMTQKM 72
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++EE+ K F FD ++ GKIS L V K +G + +EEL ++++ D D DG +S E
Sbjct: 77 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 136
Query: 77 FETICR 82
F I +
Sbjct: 137 FLRIMK 142
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVL-KSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
+EE++K+ ++ D GK++ + TV+ + M +EE+++ + D D+ G IS
Sbjct: 40 KKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFK 99
Query: 76 EFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
+ + + + EL+E D D+D +G +S +E ++ +
Sbjct: 100 NLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 150 RSMMT 154
MMT
Sbjct: 68 VQMMT 72
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 77 F 77
F
Sbjct: 67 F 67
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 150 RSMMT 154
MMT
Sbjct: 67 VQMMT 71
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 77 F 77
F
Sbjct: 66 F 66
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 150 RSMMT 154
MMT
Sbjct: 65 VQMMT 69
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 77 F 77
F
Sbjct: 64 F 64
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 150 RSMMT 154
MMT
Sbjct: 64 VQMMT 68
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 77 F 77
F
Sbjct: 63 F 63
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 150 RSMMT 154
MMT
Sbjct: 61 VQMMT 65
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ EF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
++M++IF +FD N DGKISL+EL L+++GS+ +E+ R+M ++DTD DGFI +EF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEFI 61
Query: 79 TICRTSSG 86
+ C + G
Sbjct: 62 SFCNANPG 69
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
++ F +D + +G IS EL L LG S D M+ +D DGDG ++F EF S
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 152 MMTTSLKPG 160
+ PG
Sbjct: 63 FCNAN--PG 69
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
+++ R+ + DT+ DG ISLSE RT G+ E++ D D +G I E
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRT-LGSTSADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
++M++IF +FD N DGKISL+EL L+++GS+ +E+ R+M ++DTD DGFI +EF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEFI 60
Query: 79 TICRTSSG 86
+ C + G
Sbjct: 61 SFCNANPG 68
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
++ F +D + +G IS EL L LG S D M+ +D DGDG ++F EF S
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 152 MMTTSLKPG 160
+ PG
Sbjct: 62 FCNAN--PG 68
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
+++ R+ + DT+ DG ISLSE RT G+ E++ D D +G I E
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRT-LGSTSADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S +++Q+ F FD + DGK+S+ EL + L+S+G + EL + L+ + L+
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLAT 59
Query: 77 FETICRTSSGAAGEA--ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIK 134
F+T+ R E E+ +AF D++ NG I EL +L LG + ++K
Sbjct: 60 FKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMK 119
Query: 135 PVDADGDGNVNFEEFRSMMTT 155
V GDG +N+E F M+ T
Sbjct: 120 EVSVSGDGAINYESFVDMLVT 140
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF-- 149
+++E F ++D+D +G +S EEL L LG K + + IK G +N +EF
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLG-KNPTNAELNTIK-------GQLNAKEFDL 57
Query: 150 RSMMTTSLKPGPAP 163
+ T KP P
Sbjct: 58 ATFKTVYRKPIKTP 71
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E EL EAF ++D+D NGLISA EL V+ LG K + D MI+ D DGDG++N+EEF
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
Query: 150 RSMMTT 155
MM +
Sbjct: 67 VRMMVS 72
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ + F FD + +G IS EL V+ ++G ++E+ ++ + D D DG I+ E
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 65
Query: 77 F 77
F
Sbjct: 66 F 66
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 34 GKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGA-----A 88
G++S ++ +L+ +G + + +++++ D +G I F+ I G
Sbjct: 29 GRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQ 88
Query: 89 GEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
+ ELREAF LYD++ NG IS + + +L L S + AMI +DADG G V+FEE
Sbjct: 89 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 148
Query: 149 FRSMMT 154
F +MT
Sbjct: 149 FMGVMT 154
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 19 EEMQKIFNQFDANKDGKISLTEL-----------ATVLKSMGSSYKEEELVRVMEDLDTD 67
+E+ +IF Q D N DG++ EL + + SS E E+ +++ +D D
Sbjct: 314 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 373
Query: 68 KDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVD 127
++G+I SEF T+C L AF +D D +G I+ EE L RL VD
Sbjct: 374 RNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEE----LGRLFGVTEVD 429
Query: 128 --GCVAMIKPVDADGDGNVNFEEFRSMM 153
+++ D + DG V+FEEF MM
Sbjct: 430 DETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 12 KQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGF 71
KQL++SRE + F QFD++ GKI+ EL + + +E +V+++ D + DG
Sbjct: 390 KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV--TEVDDETWHQVLQECDKNNDGE 447
Query: 72 ISLSEF----ETIC 81
+ EF + IC
Sbjct: 448 VDFEEFVEMMQKIC 461
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E E+REAF + D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
Query: 150 RSMMT 154
MMT
Sbjct: 88 VQMMT 92
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F D + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 77 F 77
F
Sbjct: 87 F 87
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 150 RSMM 153
MM
Sbjct: 64 VQMM 67
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS EL V+ ++G +EE+ ++ + D D DG ++ E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 77 F 77
F
Sbjct: 63 F 63
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++E+++ F+ FD + G I EL ++++G K+EE+ +++ ++D D G I E
Sbjct: 26 QKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEE 85
Query: 77 FETICRTSSGAA-GEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
F T+ G E+ +AF L+D D +G I+ ++L V LG + + MI
Sbjct: 86 FLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAE 145
Query: 136 VDADGDGNVNFEEF-RSMMTTSL 157
D + D ++ +EF R M TSL
Sbjct: 146 ADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 19 EEMQKIFNQFDANKDGKISLTEL-----------ATVLKSMGSSYKEEELVRVMEDLDTD 67
+E+ +IF Q D N DG++ EL + + SS E E+ +++ +D D
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 99
Query: 68 KDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVD 127
++G+I SEF T+C L AF +D D +G I+ EE L RL VD
Sbjct: 100 RNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEE----LGRLFGVTEVD 155
Query: 128 G--CVAMIKPVDADGDGNVNFEEFRSMM 153
+++ D + DG V+FEEF MM
Sbjct: 156 DETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 12 KQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGF 71
KQL++SRE + F QFD++ GKI+ EL + + +E +V+++ D + DG
Sbjct: 116 KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV--TEVDDETWHQVLQECDKNNDGE 173
Query: 72 ISLSEF----ETIC 81
+ EF + IC
Sbjct: 174 VDFEEFVEMMQKIC 187
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSM-----------GSSYKEEELVRVMEDLDTD 67
+E+ IF++ D N DG++ EL K + +S E E+ +V++ +D D
Sbjct: 358 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD 417
Query: 68 KDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVD 127
K+G+I SEF T+ L AF ++D D +G IS+ EL + +
Sbjct: 418 KNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSET- 476
Query: 128 GCVAMIKPVDADGDGNVNFEEFRSMM 153
+++ VD + DG V+F+EF+ M+
Sbjct: 477 -WKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKD 69
+RK L+ SRE +++ F FD++ GKIS TELAT+ S E V+ ++D + D
Sbjct: 433 DRKTLL-SRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNND 489
Query: 70 GFISLSEFETI 80
G + EF+ +
Sbjct: 490 GEVDFDEFQQM 500
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E EL+EAF ++D+D+NG ISA EL V+ LG K + + MI+ D DGDG +N+EEF
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 150 RSMM 153
+M
Sbjct: 63 VKVM 66
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD +++G IS EL V+ ++G +EE+ ++ + D D DG I+ E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 77 F 77
F
Sbjct: 62 F 62
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSM-----------GSSYKEEELVRVMEDLDTD 67
+E+ IF++ D N DG++ EL K + +S E E+ +V++ +D D
Sbjct: 359 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD 418
Query: 68 KDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVD 127
K+G+I SEF T+ L AF ++D D +G IS+ EL + +
Sbjct: 419 KNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSET- 477
Query: 128 GCVAMIKPVDADGDGNVNFEEFRSMM 153
+++ VD + DG V+F+EF+ M+
Sbjct: 478 -WKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKD 69
+RK L+ SRE +++ F FD++ GKIS TELAT+ S E V+ ++D + D
Sbjct: 434 DRKTLL-SRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNND 490
Query: 70 GFISLSEFETI 80
G + EF+ +
Sbjct: 491 GEVDFDEFQQM 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSM-----------GSSYKEEELVRVMEDLDTD 67
+E+ IF++ D N DG++ EL K + +S E E+ +V++ +D D
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD 394
Query: 68 KDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVD 127
K+G+I SEF T+ L AF ++D D +G IS+ EL + + +
Sbjct: 395 KNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDS--E 452
Query: 128 GCVAMIKPVDADGDGNVNFEEFRSMM 153
+++ VD + DG V+F+EF+ M+
Sbjct: 453 TWKSVLSEVDKNNDGEVDFDEFQQML 478
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKD 69
+RK L+ SRE +++ F FD++ GKIS TELAT+ S E V+ ++D + D
Sbjct: 410 DRKTLL-SRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNND 466
Query: 70 GFISLSEFETI 80
G + EF+ +
Sbjct: 467 GEVDFDEFQQM 477
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 51 SYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISA 110
SYK + +V D K G + L+E + + E+REAFDL+D D +G I A
Sbjct: 4 SYKAKTVVSARRD---QKKGRVGLTEEQ-----------KQEIREAFDLFDTDGSGTIDA 49
Query: 111 EELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSL 157
+EL + + LG + + MI +D DG G ++FEEF +MMT +
Sbjct: 50 KELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKM 96
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
++E+++ F+ FD + G I EL ++++G K+EE+ +++ ++D D G I EF
Sbjct: 29 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 88
Query: 78 ETI 80
T+
Sbjct: 89 LTM 91
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E E+REAF ++D+D NG ISA +L V+ LG K + + MI+ D DGDG VN+E+F
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65
Query: 150 RSMMT 154
MMT
Sbjct: 66 VQMMT 70
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+++ F FD + +G IS +L V+ ++G +EE+ ++ + D D DG ++ +
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 77 F 77
F
Sbjct: 65 F 65
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI 80
++++F D + G I+ EL LK +GS E E+ +M+ D DK G I EF
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI-KCSVDGCVAMIKPVDAD 139
+ E L AF +D+D +G I+ +E+ G+ +D MIK +D D
Sbjct: 72 TVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHID---DMIKEIDQD 128
Query: 140 GDGNVNFEEFRSMM 153
DG +++ EF +MM
Sbjct: 129 NDGQIDYGEFAAMM 142
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 16 VSREE-MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISL 74
+ REE + F+ FD + G I+L E+ K G + + +++++D D DG I
Sbjct: 78 LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDY 135
Query: 75 SEFETICRTSSGAAGEAE--------LREAFDLYDQDKNGLISA 110
EF + R G G LR+A L D N +I
Sbjct: 136 GEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEG 179
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKD 69
N + L ++E+ + F+ FD N DG + EL +K++G + E++ ++++ D++
Sbjct: 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGR 73
Query: 70 GFISLSEFETICRTSSGAAGEA--------ELREAFDLYDQDKNGLISAEELNLVLNRLG 121
+ +F + GE E++ AF L+D D G IS + L V LG
Sbjct: 74 HLMKYDDFYIVM-------GEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG 126
Query: 122 IKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 156
+ + AMI+ D DGDG +N EF ++ T S
Sbjct: 127 ETLTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+ E ++IF +FDAN DGKIS EL LK++G S +E+ +M ++DTD DGFIS EF
Sbjct: 8 KAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEF 66
Query: 78 ETICRTSSG 86
R + G
Sbjct: 67 TDFGRANRG 75
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
+AE F +D + +G ISA EL L LG + D M+ +D DGDG ++F+EF
Sbjct: 8 KAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGA 87
+DG IS EL V++ +G + EEL +++++D D G + EF + + S
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFE 147
E EL + F ++D++ +G I EEL ++L G + D ++K D + DG ++++
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 148 EFRSMM 153
EF M
Sbjct: 152 EFLEFM 157
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 77 F 77
F
Sbjct: 153 F 153
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI 80
+++ FN DA+K G+I+ EL LK +G++ KE E++ + + D D G I EF
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIK-CSVDGCVAMIKPVDAD 139
+ E L AF +D+D +G I+ +EL G++ ++ + + VD D
Sbjct: 89 TLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIE---ELXRDVDQD 145
Query: 140 GDGNVNFEEF 149
DG +++ EF
Sbjct: 146 NDGRIDYNEF 155
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 13 QLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFI 72
Q I RE +IF +FD N DGKIS +EL LK++G S +E+ R+M ++DTD DGFI
Sbjct: 8 QDIADRE---RIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFI 63
Query: 73 SLSEFETICRTSSG 86
S EF R + G
Sbjct: 64 SFDEFTDFARANRG 77
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
A+ F +D + +G IS+ EL L LG + D M+ +D DGDG ++F+EF
Sbjct: 11 ADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGA 87
+DG IS EL V++ +G + EEL +++++D D G + EF + + S
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFE 147
E EL + F ++D++ +G I EEL ++L G + D ++K D + DG ++++
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 148 EFRSMM 153
EF M
Sbjct: 152 EFLEFM 157
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
+ EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 77 F 77
F
Sbjct: 153 F 153
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGA 87
+DG IS EL V++ +G + EEL +++++D D G + EF + + S
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFE 147
E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++
Sbjct: 92 KSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 148 EFRSMM 153
EF M
Sbjct: 152 EFLEFM 157
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ +F +D N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 77 F 77
F
Sbjct: 153 F 153
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSS--------YKEEELVRVMEDLDTDKDG 70
+E+ IF D N DG++ EL + E E+ ++ D D++G
Sbjct: 63 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 122
Query: 71 FISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLV--LNRLGIKCSVDG 128
+I SEF T+ + +L AF +DQD NG IS +EL V L+ L K
Sbjct: 123 YIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKT---- 178
Query: 129 CVAMIKPVDADGDGNVNFEEFRSMM 153
MI +D++ DG+V+FEEF M+
Sbjct: 179 WKEMISGIDSNNDGDVDFEEFCKMI 203
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVM-EDLDTDK 68
+RK L+ S+++++ F +FD + +GKIS+ ELA+V G + E + + M +D++
Sbjct: 135 DRKSLL-SKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTWKEMISGIDSNN 190
Query: 69 DGFISLSEF 77
DG + EF
Sbjct: 191 DGDVDFEEF 199
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF LYD+D +G I+ +EL V+ LG+ + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARIMK 77
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ +D + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 IC 81
+
Sbjct: 71 MM 72
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 65 DTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R+
Sbjct: 20 DKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMARI 75
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMG-----------SSYKEEELVRVMEDLDTD 67
+E+ IF++ D N DG++ EL K + +S E E+ +V++ +D D
Sbjct: 335 KELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFD 394
Query: 68 KDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVD 127
K+G+I SEF T+ L AF +D D +G IS+ EL + +
Sbjct: 395 KNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDVDSET- 453
Query: 128 GCVAMIKPVDADGDGNVNFEEFRSMM 153
+++ VD + DG V+F+EF+ +
Sbjct: 454 -WKSVLSEVDKNNDGEVDFDEFQQXL 478
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKD 69
+RK L+ SRE +++ F FD++ GKIS TELAT+ S E V+ ++D + D
Sbjct: 410 DRKTLL-SRERLERAFRXFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNND 466
Query: 70 GFISLSEFE 78
G + EF+
Sbjct: 467 GEVDFDEFQ 475
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSS--------YKEEELVRVMEDLDTDKDG 70
+E+ IF D N DG++ EL + E E+ ++ D D++G
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 405
Query: 71 FISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLV--LNRLGIKCSVDG 128
+I SEF T+ + +L AF +DQD NG IS +EL V L+ L K +
Sbjct: 406 YIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKE- 464
Query: 129 CVAMIKPVDADGDGNVNFEEFRSMM 153
MI +D++ DG+V+FEEF M+
Sbjct: 465 ---MISGIDSNNDGDVDFEEFCKMI 486
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVM-EDLDTDK 68
+RK L+ S+++++ F +FD + +GKIS+ ELA+V G + E + + M +D++
Sbjct: 418 DRKSLL-SKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTWKEMISGIDSNN 473
Query: 69 DGFISLSEF 77
DG + EF
Sbjct: 474 DGDVDFEEF 482
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGA 87
+DG IS EL V++ +G + EEL +++++D D G + EF + + S
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKG 91
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFE 147
E EL + F ++D++ +G I EEL ++L G + D ++K D + DG ++++
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 148 EFRSMM 153
EF M
Sbjct: 152 EFLEFM 157
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
+ EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 77 F 77
F
Sbjct: 153 F 153
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 79 VMMVRCMK 86
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADGDG ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D DG I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 80 I 80
+
Sbjct: 71 M 71
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGA 87
+DG IS EL V++ +G + EEL +++++D D G + EF + + S
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFE 147
E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 148 EFRSMM 153
E+ M
Sbjct: 152 EWLEFM 157
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 77 F 77
+
Sbjct: 153 W 153
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGA 87
+DG IS EL V++ +G + EEL +++++D D G + EF + + S
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFE 147
E EL + F + D++ +G I +EL ++L G + D ++K D + DG ++++
Sbjct: 92 KSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 148 EFRSMM 153
EF M
Sbjct: 152 EFLEFM 157
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ +F D N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 77 F 77
F
Sbjct: 153 F 153
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 -ICRTSSGAAGEAELREAF 97
+ R E E+REAF
Sbjct: 71 MMARKMKDTDSEEEIREAF 89
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKD 69
N + L ++E+ + F+ FD N DG + EL K++G + E++ ++++ D++
Sbjct: 14 NSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGR 73
Query: 70 GFISLSEFETICRTSSGAAGEA--------ELREAFDLYDQDKNGLISAEELNLVLNRLG 121
+F + GE E++ AF L+D D G IS + L V LG
Sbjct: 74 HLXKYDDFYIV-------XGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG 126
Query: 122 IKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 156
+ + A I+ D DGDG +N EF ++ T S
Sbjct: 127 ETLTDEELRAXIEEFDLDGDGEINENEFIAICTDS 161
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I 80
+
Sbjct: 71 M 71
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I 80
+
Sbjct: 71 M 71
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
+MM +K
Sbjct: 70 TMMARKMK 77
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I 80
+
Sbjct: 71 M 71
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
+ ELREAF LYD++ NG IS + + +L L S + AMI +DADG G V+FEEF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 150 RSMMT 154
+MT
Sbjct: 62 MGVMT 66
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 32/60 (53%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
++E+++ F +D +G IS + +L + + E+L +++++D D G + EF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGA 87
+DG IS EL V++ +G + EEL +++++D D G + EF + + S
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFE 147
E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 148 EFRSMM 153
E M
Sbjct: 152 EXLEFM 157
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLG---IKCSVDGCVAMIKPVDADGDGNVNFE 147
AE + AFD++D D G IS +EL V+ LG KC +D A+I VD DG G ++FE
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELD---AIICEVDEDGSGTIDFE 76
Query: 148 EFRSMMTTSLK 158
EF MM +K
Sbjct: 77 EFLVMMVRQMK 87
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
E + F+ FDA+ G IS EL TV++ +G + + EL ++ ++D D G I EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEF 78
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMM 153
+MM
Sbjct: 70 TMM 72
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I 80
+
Sbjct: 71 M 71
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 151 SMM 153
+MM
Sbjct: 71 TMM 73
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 80 I 80
+
Sbjct: 72 M 72
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 80 VMMVRQMK 87
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
E + F+ FDA+ G IS EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMM 153
+MM
Sbjct: 70 TMM 72
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I 80
+
Sbjct: 71 M 71
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMM 153
+MM
Sbjct: 70 TMM 72
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 80 I 80
+
Sbjct: 71 M 71
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D DG I+ E T+ R+ EAEL++ + D D NG I E ++ R
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI 80
++ IF D + G +S E+ LK +G ++ +V+ D+D++ G I ++F
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAA 118
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCS-VDGCV-AMIKPVDA 138
+ F +D D NG IS EEL + R I+ +D + ++++ VD
Sbjct: 119 TIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDL 178
Query: 139 DGDGNVNFEEFRSMMT 154
+GDG ++F EF MM+
Sbjct: 179 NGDGEIDFHEFMLMMS 194
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 1 MAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELV-- 58
+AAT + KQ + +E F FD + +GKIS+ EL + G E L+
Sbjct: 116 LAATID-----KQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIF---GRDDIENPLIDK 167
Query: 59 ---RVMEDLDTDKDGFISLSEF 77
+++++D + DG I EF
Sbjct: 168 AIDSLLQEVDLNGDGEIDFHEF 189
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS +EL V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 68
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 69 VMMVRQMK 76
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
E + F+ FDA+ G IS EL TV++ +G + +EEL ++E++D D G I EF
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+E +EAF+L+D ++ G I+ E L VL + G++ M DA G+G + F EF
Sbjct: 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFL 65
Query: 151 SMMTTSLK 158
SMM +K
Sbjct: 66 SMMGRRMK 73
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E ++ F FD+ + G I+ L TVLK G + + + D +G I EF +
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLS 66
Query: 80 IC-RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+ R E LR+AF +D + G I L L LG + + +
Sbjct: 67 MMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITET 126
Query: 139 DGDGNVNFEEFRSMMTT 155
+ G + ++ F + M T
Sbjct: 127 E-KGQIRYDNFINTMFT 142
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE +EAF L+D+D NG IS+ EL V+ LG+ S ++ +D DG+ + F EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 151 SMMTTSLK 158
++M+ LK
Sbjct: 70 ALMSRQLK 77
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
E ++ F FD + +G IS +ELATV++S+G S E E+ +M ++D D + I SEF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
D D +G IS SE T+ R+ + EAE+ + + D D N I E +++R
Sbjct: 19 FDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+E +EAF L+D+D +G I+ +EL V+ LG + MI VDADG+G ++F EF
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 151 SMMTTSLK 158
++M +K
Sbjct: 70 NLMARKMK 77
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
E ++ F+ FD + DG I+ EL TV++S+G + E EL ++ ++D D +G I EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEE-LNLVLNRL 120
D D DG I+ E T+ R+ EAEL++ + D D NG I E LNL+ ++
Sbjct: 19 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM 76
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 23 KIFNQFDANKDGKISLTELATVLKSMGSSYKEEELV-RVMEDLDTDKDGFISLSEF-ETI 80
K F + D + G +S+ E ++ ++ LV RV++ DTD +G + EF E +
Sbjct: 11 KRFKKLDLDNSGSLSVEEFMSL-----PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGV 65
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL--------GIKCSVDGCVAM 132
+ S E +LR AF +YD DK+G IS EL VL + ++ VD +
Sbjct: 66 SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII- 124
Query: 133 IKPVDADGDGNVNFEEF 149
D DGDG ++FEEF
Sbjct: 125 --NADKDGDGRISFEEF 139
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 23 KIFNQFDANKDGKISLTELATVLKSMGSSYKEEELV-RVMEDLDTDKDGFISLSEF-ETI 80
K F + D + G +S+ E ++ ++ LV RV++ DTD +G + EF E +
Sbjct: 25 KRFKKLDLDNSGSLSVEEFMSL-----PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGV 79
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL--------GIKCSVDGCVAM 132
+ S E +LR AF +YD DK+G IS EL VL + ++ VD +
Sbjct: 80 SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII- 138
Query: 133 IKPVDADGDGNVNFEEF 149
D DGDG ++FEEF
Sbjct: 139 --NADKDGDGRISFEEF 153
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E+REAFDL+D D G I +EL + + LG + + MI +D +G G +NF +F +
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 91
Query: 152 MMTTSL 157
+MT +
Sbjct: 92 VMTQKM 97
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 41/64 (64%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
++E+++ F+ FDA+ G I + EL ++++G K+EE+ +++ ++D + G ++ +F
Sbjct: 30 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDF 89
Query: 78 ETIC 81
T+
Sbjct: 90 LTVM 93
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 23 KIFNQFDANKDGKISLTELATVLKSMGSSYKEEELV-RVMEDLDTDKDGFISLSEF-ETI 80
K F + D + G +S+ E ++ ++ LV RV++ DTD +G + EF E +
Sbjct: 10 KRFKKLDLDNSGSLSVEEFMSL-----PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGV 64
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL--------GIKCSVDGCVAM 132
+ S E +LR AF +YD DK+G IS EL VL + ++ VD +
Sbjct: 65 SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII- 123
Query: 133 IKPVDADGDGNVNFEEF 149
D DGDG ++FEEF
Sbjct: 124 --NADKDGDGRISFEEF 138
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 23 KIFNQFDANKDGKISLTELATVLKSMGSSYKEEELV-RVMEDLDTDKDGFISLSEF-ETI 80
K F + D + G +S+ E ++ ++ LV RV++ DTD +G + EF E +
Sbjct: 24 KRFKKLDLDNSGSLSVEEFMSL-----PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGV 78
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL--------GIKCSVDGCVAM 132
+ S E +LR AF +YD DK+G IS EL VL + ++ VD +
Sbjct: 79 SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII- 137
Query: 133 IKPVDADGDGNVNFEEF 149
D DGDG ++FEEF
Sbjct: 138 --NADKDGDGRISFEEF 152
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
AE + AFD++D D G IS + L V+ LG + + A+I+ VD DG G ++FEEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 80 VMMVRQMK 87
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
E + F+ FDA+ G IS L TV++ +G + +EEL ++E++D D G I EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E EL+EAF + D++K G+I + L +L LG + + D MI D DG G V++EEF
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 150 RSMMTTS 156
+ +M +S
Sbjct: 66 KCLMMSS 72
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
E+++ F D K G I + L +LKS+G E+E+ ++ + DTD G + EF+
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 80 ICRTS 84
+ +S
Sbjct: 68 LMMSS 72
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E+REAF ++D+D NG IS +EL + LG + +I+ +D DGDG V+FEEF +
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVT 96
Query: 152 MM 153
++
Sbjct: 97 LL 98
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
EE+++ F FD + +G IS EL T ++S+G E EL +++ LD D DG + EF
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 79 TIC 81
T+
Sbjct: 96 TLL 98
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+E ++ FN D N+DG I +L +L SMG + +E L +M ++ G I+ + F
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMM----SEAPGPINFTMFL 62
Query: 79 TIC-RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
T+ +G E +R AF +D++ +G I + L +L +G + + + M +
Sbjct: 63 TMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAP 122
Query: 138 ADGDGNVNFEEFRSMMTTSLK 158
D GN N+ EF ++ K
Sbjct: 123 IDKKGNFNYVEFTRILKHGAK 143
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 24 IFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC-- 81
+F Q DAN DG +S E+ + S E+ L + + +D D +G I L+EF
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 82 -RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADG 140
+ + + L+ + L D D +G ++ EE+ + G + VD I DA+G
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVD----QIMKADANG 120
Query: 141 DGNVNFEEFRSM 152
DG + EEF +
Sbjct: 121 DGYITLEEFLAF 132
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 21/25 (84%)
Query: 131 AMIKPVDADGDGNVNFEEFRSMMTT 155
A+ K +DA+GDG+V++EE ++ +++
Sbjct: 4 ALFKQLDANGDGSVSYEEVKAFVSS 28
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+ +EAF L+D+D +G I+ EEL V+ L + + MI VDADG+G + F+EF
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFL 69
Query: 151 SMMTTSLK 158
S+M +K
Sbjct: 70 SLMAKKVK 77
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 15 IVSREEM---QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGF 71
I+S E++ ++ F FD + DG I++ ELATV++S+ + EEEL ++ ++D D +G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 72 ISLSEF 77
I EF
Sbjct: 63 IEFDEF 68
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
D D DG I++ E T+ R+ E EL++ D D NG I +E
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
++E+++ F+ FDA+ G I + EL +++G K+EE+ + + ++D + G + +F
Sbjct: 30 KQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDF 89
Query: 78 ETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPV 136
T+ + S + E+ +AF L+D D+ G IS + L V LG + + I
Sbjct: 90 LTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEA 149
Query: 137 DADGDGNVNFEEF-RSMMTTSL 157
D DGDG V+ +EF R TSL
Sbjct: 150 DRDGDGEVSEQEFLRIXKKTSL 171
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++EE+ K F FD ++ GKIS L V K +G + +EEL +++ D D DG +S E
Sbjct: 102 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQE 161
Query: 77 FETICRTSS 85
F I + +S
Sbjct: 162 FLRIXKKTS 170
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+ +EAF L+D+D +G I+ EEL V+ L + + MI VDADG+G + F+EF
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFL 69
Query: 151 SMM 153
S+M
Sbjct: 70 SLM 72
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 15 IVSREEM---QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGF 71
I+S E++ ++ F FD + DG I++ ELATV++S+ + EEEL ++ ++D D +G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 72 ISLSEF 77
I EF
Sbjct: 63 IEFDEF 68
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
D D DG I++ E T+ R+ E EL++ D D NG I +E
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Query: 19 EEMQKIFNQFDANKDGKISLTELA---------------TVLKSMGSSYKEEELVRVMED 63
+++ +IF + D N DG + EL +++++ GS+ E+++ +M
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI-EDQIDSLMPL 389
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIK 123
LD D G I SEF + + AF ++D+D +G IS +EL + ++
Sbjct: 390 LDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSS 449
Query: 124 CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
++ ++I+ VD + DG V+F EF M+
Sbjct: 450 IQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 12 KQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGF 71
+ +++SRE M++ F FD + GKIS EL + SS + EEL ++E +D +KDG
Sbjct: 410 RTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGE 469
Query: 72 ISLSEF 77
+ +EF
Sbjct: 470 VDFNEF 475
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 5 TEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSM 48
++ADS+ + EE++ I Q D NKDG++ E +L++
Sbjct: 444 SQADSS-----IQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFE 147
AG +L+ AF +DQD +G I+ +EL + LG + AMI+ D D DG VN+E
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 148 EFRSMMT 154
EF M+
Sbjct: 63 EFARMLA 69
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
E++Q F FD + DG I++ EL + +G +EEL ++ + D D+DG ++ EF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ QD ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 79 VMMVRCMK 86
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V++ +G + EEL +++++D D G + EF
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ QD ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 79 VMMVRCMK 86
Score = 32.7 bits (73), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V++ +G + EEL +++++D D G + EF
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 19 EEMQKIFNQFDA--NKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFIS--- 73
EE++++F+ FD +DG + ++ +L+ +G + E +V + T K G +
Sbjct: 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTE---AQVHQHGGTKKMGEKAYKL 65
Query: 74 ---LSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV 130
L +E + +G A + E EAF +D++ GLIS+ E+ VL LG + + D C
Sbjct: 66 EEILPIYEEMSSKDTGTAAD-EFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCN 124
Query: 131 AMIKPVDA--DGDGNVNFEEFRSMMTTSLKPGPAP 163
+ D D DGN+ +E+ + + GP P
Sbjct: 125 DIFTFCDIREDIDGNIKYED----LMKKVMAGPFP 155
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 56 ELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELN 114
EL ++ ++D D +G I EF T+ R E E+REAF ++D+D NG ISA EL
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 115 LVLNRLG 121
V+ LG
Sbjct: 62 HVMTNLG 68
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVL-KSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
E+Q + N+ DA+ +G I E T++ + M + EEE+ D D +G+IS +E
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 79 TI 80
+
Sbjct: 62 HV 63
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 132 MIKPVDADGDGNVNFEEFRSMMTTSLK 158
MI VDADG+G ++F EF +MM +K
Sbjct: 6 MINEVDADGNGTIDFPEFLTMMARKMK 32
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMG 49
S EE+++ F FD + +G IS EL V+ ++G
Sbjct: 36 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 91 AELREAFDLYDQDKNGLISAEE-LNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
AEL++ + D D NG I E L ++ ++ S + + D DG+G ++ E
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 150 RSMMT 154
R +MT
Sbjct: 61 RHVMT 65
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 22 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC 81
++ F+ FD + G+I T + +L++ G + E+ + L + D + +F +
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVD----MEQFLQVL 63
Query: 82 RTSSG---AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
+G E + F ++D+D G+I EL VL LG K S + ++K V
Sbjct: 64 NRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV 123
Query: 139 DGDGNVNFEEFRSMM 153
DG VN+ +F M+
Sbjct: 124 K-DGMVNYHDFVQMI 137
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
EE K F FD + G I + EL VL S+G EE+ +++ + KDG ++ +F
Sbjct: 76 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDF 133
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E++EAFDL+D +K G I EL + + LG + ++ D +G+G + F++F
Sbjct: 8 EIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLD 67
Query: 152 MMTTSLK 158
+MT +K
Sbjct: 68 IMTEKIK 74
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 50 SSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLIS 109
S +++E+ + DT+K G I E + R + E+ E + YD++ NG I
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 110 AEEL 113
++
Sbjct: 62 FDDF 65
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI 80
+ ++F + D N +G +S E+ TVL S+G K+ ++ R+++ LD + G I+ +EF
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGI--KKWDINRILQALDINDRGNITYTEFMAG 98
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEEL-NLVLNRLGIKCSVDGCVAMIKPVDA- 138
C L+ AF+ D+D++G IS ++ +LV +++ +D + +
Sbjct: 99 CYRWKNIESTF-LKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKG 157
Query: 139 ----DGDGNVNFEEFRSMMTTSL 157
++F+EF+ M ++
Sbjct: 158 IPREHIINKISFQEFKDYMLSTF 180
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 77 F 77
F
Sbjct: 64 F 64
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++EF
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
Query: 150 RSMM 153
M
Sbjct: 65 LEFM 68
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 48 MGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGL 107
MG S EEEL + D + DG+I L E + + + + E ++ E D++ +G
Sbjct: 1 MGKS--EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 58
Query: 108 ISAEEL 113
I +E
Sbjct: 59 IDYDEF 64
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 77 F 77
F
Sbjct: 63 F 63
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E EL + F ++D++ +G I EEL ++L G + D ++K D + DG ++++EF
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 150 RSMM 153
M
Sbjct: 64 LEFM 67
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 77 F 77
F
Sbjct: 65 F 65
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E EL + F ++D++ +G I EEL ++L G + D ++K D + DG ++++EF
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 150 RSMM 153
M
Sbjct: 66 LEFM 69
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 54 EEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
EEEL + D + DG+I L E + + + + E ++ E D++ +G I +E
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTD-- 67
N+ QL EE ++ F FD DGKI ++ V++++G + E+++V+ + +D
Sbjct: 5 NKDQL----EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEL 60
Query: 68 KDGFISLSEFETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNRLGIKC 124
K + F + + + G+ + E F ++D++ NG + EL VL LG K
Sbjct: 61 KSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKM 120
Query: 125 SVDGCVAMIKPVDADGDGNVNFEEF 149
+ + V + D +G +N+E F
Sbjct: 121 TEEE-VETVLAGHEDSNGCINYEAF 144
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 22 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC 81
+++F +FD NKDGK+SL E V + + +E++V+ E++D D +G ++ EF T C
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF-TSC 62
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 59 RVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN 118
RV E D +KDG +SL EF + S + ++ + F+ D D NG ++A+E +
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64
Query: 119 RL 120
++
Sbjct: 65 KM 66
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 94 REAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+ F+ +D++K+G +S +E V + + V + +D DG+G +N +EF S +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 154 TTSL 157
L
Sbjct: 64 EKML 67
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ Q ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 79 VMMVRCMK 86
Score = 33.1 bits (74), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 17 SREEMQKIFNQF-DANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
+ E + F+ F +DG IS EL V++ +G + EEL +++++D D G +
Sbjct: 16 QKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Query: 76 EF 77
EF
Sbjct: 76 EF 77
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++EE+ K F FD ++ GKIS L V K +G + +EEL ++++ D D DG +S E
Sbjct: 9 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 68
Query: 77 FETICRTSS 85
F I + +S
Sbjct: 69 FLRIMKKTS 77
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF-R 150
E+ +AF L+D D+ G IS + L V LG + + MI D DGDG V+ +EF R
Sbjct: 12 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLR 71
Query: 151 SMMTTSL 157
M TSL
Sbjct: 72 IMKKTSL 78
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 46 KSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKN 105
+ M +EE+++ + D D+ G IS + + + + EL+E D D+D +
Sbjct: 2 QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGD 61
Query: 106 GLISAEELNLVLNRLGI 122
G +S +E ++ + +
Sbjct: 62 GEVSEQEFLRIMKKTSL 78
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
+ EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 77 F 77
F
Sbjct: 73 F 73
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 82 RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGD 141
+ S E EL + F ++D++ +G I EEL ++L G + D ++K D + D
Sbjct: 6 KDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 65
Query: 142 GNVNFEEFRSMM 153
G ++++EF M
Sbjct: 66 GRIDYDEFLEFM 77
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 54 EEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
EEEL + D + DG+I L E + + + + E ++ E D++ +G I +E
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++EE+ K F FD ++ GKIS L V K +G + +EEL ++++ D D DG +S E
Sbjct: 19 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 78
Query: 77 FETICRTSS 85
F I + +S
Sbjct: 79 FLRIMKKTS 87
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF-R 150
E+ +AF L+D D+ G IS + L V LG + + MI D DGDG V+ +EF R
Sbjct: 22 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLR 81
Query: 151 SMMTTSL 157
M TSL
Sbjct: 82 IMKKTSL 88
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 39/82 (47%)
Query: 41 LATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLY 100
L + + M +EE+++ + D D+ G IS + + + + EL+E D
Sbjct: 7 LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA 66
Query: 101 DQDKNGLISAEELNLVLNRLGI 122
D+D +G +S +E ++ + +
Sbjct: 67 DRDGDGEVSEQEFLRIMKKTSL 88
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
+ +F + D ++ G IS TEL L + + + + ++ D + ++ SEF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ + + + + F YD+D +G+I EL L+ G + S +I+ D
Sbjct: 69 VWKYIT------DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 122
Query: 140 GDGNVNFEEF 149
G G + F++F
Sbjct: 123 GRGQIAFDDF 132
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
S EE+ F FD N DG I + EL +L++ G EE++ +M+D D + DG I E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 77 F 77
F
Sbjct: 68 F 68
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E EL F ++D++ +G I EEL +L G + ++K D + DG ++F+EF
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
Query: 150 RSMM 153
MM
Sbjct: 69 LKMM 72
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 54 EEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
EEEL D + DGFI + E I R + E ++ + D++ +G I +E
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 89 GEAELREAFDLYDQDKNGLISAEELNLVLNRL-GIKCSVDGCVAMIKPVDADGDGNVNFE 147
G ELR+AF +D + +G IS EL + +L G + +I+ VD +GDG V+FE
Sbjct: 5 GVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 64
Query: 148 EFRSMMT 154
EF MM+
Sbjct: 65 EFVRMMS 71
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 15 IVSREEMQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFIS 73
++ +E++ F +FD N DG+IS +EL ++ +G ++ ++ D+D + DG +
Sbjct: 3 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVD 62
Query: 74 LSEF 77
EF
Sbjct: 63 FEEF 66
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
+ EE+ +F FD N DG I L EL +L++ G + E+++ +M+D D + DG I E
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 77 F 77
F
Sbjct: 68 F 68
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 82 RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGD 141
+ S E EL + F ++D++ +G I EEL ++L G + D ++K D + D
Sbjct: 1 KDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 60
Query: 142 GNVNFEEFRSMM 153
G ++++EF M
Sbjct: 61 GRIDYDEFLEFM 72
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 31/147 (21%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
++RE+ KI+ QF + L TV D D +GFI
Sbjct: 43 LAREDFVKIYKQFFPFGSPEDFANHLFTVF-------------------DKDNNGFIHFE 83
Query: 76 EFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNL----VLNRLGIKCSVDGCVA 131
EF T+ T+S E +L AF+LYD + +G I+ +E+ V +G +++ A
Sbjct: 84 EFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEA 143
Query: 132 --------MIKPVDADGDGNVNFEEFR 150
+ K +D + DG + +EFR
Sbjct: 144 TPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 22/102 (21%)
Query: 19 EEMQKIFNQFDANKDGKIS----LTELATVLKSMGS--------SYKEEELVRVMEDLDT 66
E++ F +D N DG I+ LT +A+V K MGS + E + ++ + +D
Sbjct: 99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDK 158
Query: 67 DKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLI 108
++DG+I+L EF G+ + + A +LYD GLI
Sbjct: 159 NEDGYITLDEFR------EGSKVDPSIIGALNLYD----GLI 190
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 97 FDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 156
F ++D+D NG I EE VL+ + + D + DG + F+E +++ +
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 157 LK 158
K
Sbjct: 129 YK 130
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 19 EEMQKIFNQFDA--NKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++++++F FD +DG + ++ V + +G + + E++ V T K G SL
Sbjct: 9 DDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVG---GTHKMGEKSLP- 64
Query: 77 FETICRTSSG-----AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVA 131
FE G A+ EAF +D++ G IS EL VL+ LG + S +
Sbjct: 65 FEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDE 124
Query: 132 MIKPVD--ADGDGNVNFEEFRSMMTTSLKPGPAP 163
+I D D +GNV +EEF + T GP P
Sbjct: 125 IINLTDLQEDLEGNVKYEEFVKKVMT----GPYP 154
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 19 EEMQKIFNQFDA--NKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
++++++F FD +DG + ++ V + +G + + E++ V T K G SL
Sbjct: 10 DDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVG---GTHKMGEKSLP- 65
Query: 77 FETICRTSSG-----AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVA 131
FE G A+ EAF +D++ G IS EL VL+ LG + S +
Sbjct: 66 FEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDE 125
Query: 132 MIKPVD--ADGDGNVNFEEFRSMMTTSLKPGPAP 163
+I D D +GNV +EEF + T GP P
Sbjct: 126 IINLTDLQEDLEGNVKYEEFVKKVMT----GPYP 155
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
+ +F + D ++ G IS TEL L + + + + ++ D + ++ SEF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ + + + + F YD+D +G+I EL L+ G + S +I+ D
Sbjct: 87 VWKYIT------DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 140
Query: 140 GDGNVNFEEF 149
G G + F++F
Sbjct: 141 GRGQIAFDDF 150
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
+ +F + D ++ G IS TEL L + + + + ++ D + ++ SEF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ + + + + F YD+D +G+I EL L+ G + S +I+ D
Sbjct: 66 VWKYIT------DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 119
Query: 140 GDGNVNFEEF 149
G G + F++F
Sbjct: 120 GRGQIAFDDF 129
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVL-NRLGIKCSVDGCVAMIKPVDADGDGNVNF 146
A ++ L F D+D++G+IS EL L N + ++I D + VNF
Sbjct: 1 ADQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 60
Query: 147 EEF 149
EF
Sbjct: 61 SEF 63
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
+ +F + D ++ G IS TEL L + + + + ++ D + ++ SEF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ + + + + F YD+D +G+I EL L+ G + S +I+ D
Sbjct: 65 VWKYIT------DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 118
Query: 140 GDGNVNFEEF 149
G G + F++F
Sbjct: 119 GRGQIAFDDF 128
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
Score = 33.1 bits (74), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V++ +G + EEL +++++D D G + EF
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 18 REEMQKIFNQFDAN-KDGKISLTELATVLKSM-----GSSYKEEELVRVMEDLDTDKDGF 71
++E+Q+ + F + G ++ +E + K S++ E V D DK+G+
Sbjct: 24 KKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAE----YVFNVFDADKNGY 79
Query: 72 ISLSEFETICRTSSGAAGEA--ELREAFDLYDQDKNGLISAEEL 113
I EF IC S + GE +L AF LYD D NGLIS +E+
Sbjct: 80 IDFKEF--ICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEM 121
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 19 EEMQKIFNQFDANKDGKISLTELA 42
+ + KIFN D NKDG+++L E
Sbjct: 147 KRVNKIFNMMDKNKDGQLTLEEFC 170
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 25 FNQFDANKDGKISLTELATVL----KSMGSSYK--------EEELVRVMEDLDTDKDGFI 72
F +D + +G IS E+ ++ K +GS K E+ + ++ +D +KDG +
Sbjct: 105 FQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQL 164
Query: 73 SLSEFETICRTSSGAAGEAELREAFDLYD 101
+L EF C G+ + + A LYD
Sbjct: 165 TLEEF---CE---GSKRDPTIVSALSLYD 187
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V++ +G + EEL +++++D D G + EF
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 24 IFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT 83
+F + D N DG +S E+ + + E+ L + + +D D +G I +EF +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 84 SSG---AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADG 140
G + + L+ + L D D +G ++ EE+ + GI + + DA+G
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANG 120
Query: 141 DGNVNFEEF 149
DG + EEF
Sbjct: 121 DGYITLEEF 129
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Query: 60 VMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
+ +++D + DG +S E + E L+ F D D NG I E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 120 L-GIKCSVD--GCVAMIKPVDADGDGNVNFEEFRSMM 153
+ G S D G + K +D DGDG + EE S
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF 101
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 131 AMIKPVDADGDGNVNFEEFRSMMT 154
A+ K +D +GDG V++EE ++ ++
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVS 27
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM S+K
Sbjct: 79 VMMVRSMK 86
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V++ +G + EEL +++++D D G + EF
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 24 IFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT 83
+F + D N DG +S E+ + + E+ L + + +D D +G I +EF +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 84 SSG---AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADG 140
G + + L+ + L D D +G ++ EE+ + GI + + DA+G
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANG 120
Query: 141 DGNVNFEEF 149
DG + EEF
Sbjct: 121 DGYITLEEF 129
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Query: 60 VMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
+ +++D + DG +S E + E L+ F D D NG I E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 120 L-GIKCSVD--GCVAMIKPVDADGDGNVNFEEFRSMM 153
+ G S D G + K +D DGDG + EE S
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF 101
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 131 AMIKPVDADGDGNVNFEEFRSMMT 154
A+ K +D +GDG V++EE ++ ++
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVS 27
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
+ +F + D ++ G IS TEL L + + + + ++ D + ++ SEF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ + + + + F YD+D +G+I EL L+ G + S +I+ D
Sbjct: 69 VWKYIT------DWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQ 122
Query: 140 GDGNVNFEEF 149
G G + F++F
Sbjct: 123 GRGQIAFDDF 132
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV---AMIKPVDADGDGNVNFEE 148
++++ F + DQDK+G I EEL L L V A + D DGDG + EE
Sbjct: 42 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 101
Query: 149 FRSMM 153
F+S++
Sbjct: 102 FQSLV 106
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYK---EEELVRVMEDLDTDKDGFISLS 75
++++K+F D +K G I EL LK+ SS + E + DTD DG I +
Sbjct: 41 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 100
Query: 76 EFETICR 82
EF+++ +
Sbjct: 101 EFQSLVK 107
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 34 GKISLTELATV--LKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA 91
G+++L E LK++ S + + ++ E D +KDG+I E+ +
Sbjct: 30 GQLTLYEFKQFFGLKNLSPS-ANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ 88
Query: 92 ELREAFDLYDQDKNGLI-SAEELNLV-----LNRLGIKCSVDGCVAMI-KPVDADGDGNV 144
+LR F LYD D NG I E LN++ +NR + + M+ +D +GDG +
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGEL 148
Query: 145 NFEEF 149
+ EEF
Sbjct: 149 SLEEF 153
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF--- 77
++++F FD NKDG I E L + +++L + D D +G I E
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 78 ----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
I R + E FD D + +G +S EE
Sbjct: 114 IKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV---AMIKPVDADGDGNVNFEE 148
++++ F + DQDK+G I EEL L L V A + D DGDG + EE
Sbjct: 43 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
Query: 149 FRSMM 153
F+S++
Sbjct: 103 FQSLV 107
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYK---EEELVRVMEDLDTDKDGFISLS 75
++++K+F D +K G I EL LK+ SS + E + DTD DG I +
Sbjct: 42 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 101
Query: 76 EFETICR 82
EF+++ +
Sbjct: 102 EFQSLVK 108
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
+ +F + D ++ G IS EL L + + + + ++ D + ++ SEF
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ + + + + F YD+D +G+I EL L+ G + S +I+ D
Sbjct: 88 VWKYIT------DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 141
Query: 140 GDGNVNFEEF 149
G G + F++F
Sbjct: 142 GRGQIAFDDF 151
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F D N+DG I + +L S+G + ++EL +++ + G ++ + F
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLK----EAPGPLNFTMFL 57
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+D ++ E + +L +G + D K
Sbjct: 58 SIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 117
Query: 138 ADGDGNVNFEEFRSMM 153
+G G ++ F +M+
Sbjct: 118 VEG-GKFDYVRFVAMI 132
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 7 ADSNRKQLIVSREEMQKI---FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMED 63
A+ +++ +S+ +MQ++ F D ++DG I + +L + S+G ++EL ++++
Sbjct: 1 AEEAPRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKE 60
Query: 64 LDTDKDGFISLSEFETIC-RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLG 121
G ++ + F T+ SG E LR AF ++D+D G I + L +L +G
Sbjct: 61 C----PGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
EL+EAF + DQD++G I E+L + + LG D AM+K + G +NF F +
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLT 72
Query: 152 MM 153
+
Sbjct: 73 LF 74
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMED 63
++ F+ FD + G I L +L++MG ++ +EE+ V +D
Sbjct: 87 LRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKD 129
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 87 AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNF 146
A + E +EAF L+D+D + ++AEEL V+ LG + ++K D D G +
Sbjct: 10 AEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQ 69
Query: 147 EEFRSMM 153
E F ++M
Sbjct: 70 ETFLTIM 76
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 9 SNRKQLIVSRE--EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDT 66
S +K+++ + E E ++ F FD + D K++ EL TV++++G++ ++++ +++D D
Sbjct: 2 SEQKKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDK 61
Query: 67 DKDGFISLSEFETI 80
D G F TI
Sbjct: 62 DNSGKFDQETFLTI 75
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVM-----EDLDTDKDGFISL 74
+ ++ F FD D KI+L+++ +++++G + E+ +++ E+++ K I+
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKK---ITF 61
Query: 75 SEFETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVA 131
EF + + ++ + + E ++D++ NG + EL VL LG K + +
Sbjct: 62 EEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEE 121
Query: 132 MIKPVDADGDGNVNFEEF 149
++K + D +G +N+E F
Sbjct: 122 LMKGQE-DSNGCINYEAF 138
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 43.5 bits (101), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 16 VSREEMQKI---FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFI 72
+S+E+M + FN FD K G + + L SMG + E E R+M +D ++ G +
Sbjct: 719 ISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVV 778
Query: 73 SLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
+ F + + R ++ ++ +F + DKN I+ +EL
Sbjct: 779 TFQAFIDFMSRETADTDTADQVMASFKILAGDKN-YITVDEL 819
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 79 VMMVRCMK 86
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V++ +G + EEL +++++D D G + EF
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 16/108 (14%)
Query: 60 VMEDLDTDKDGFISLSEFETICRTSSGAAGEAELRE-----AFDLYDQDKNGLISAEELN 114
+++ +D+D G I +EF + A +L + AF ++D D +G I+ EL
Sbjct: 95 LLDQIDSDGSGNIDYTEF------LAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELA 148
Query: 115 LVL---NRLG--IKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSL 157
VL N+ G + V+ MI+ VD +GDG ++F EF MM +L
Sbjct: 149 HVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMKLTL 196
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVL---KSMGSSYKEE--ELVRVMEDL 64
+R+QL S++ + F FD + DG+I+ ELA VL G+ + + ++ +++ ++
Sbjct: 118 DRRQL--SKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREV 175
Query: 65 DTDKDGFISLSEFETICRTS 84
D + DG I EF + + +
Sbjct: 176 DKNGDGKIDFYEFSEMMKLT 195
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS--EF 77
E ++ F FD DGKI ++ V++++G + E+++V+ + +D+ +L +F
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 67
Query: 78 ----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMI 133
+TI + E + E ++D++ NG + E+ VL LG K + + ++
Sbjct: 68 LPMMQTIAKNKDQGCFE-DYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV 126
Query: 134 KPVDADGDGNVNFEEFRSMMTTS 156
+ D +G +N+EE M+ +
Sbjct: 127 AGHE-DSNGCINYEELVRMVLSG 148
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS--EF 77
E ++ F FD DGKI ++ V++++G + E+++V+ + +D+ +L +F
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 69
Query: 78 ----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMI 133
+TI + E + E ++D++ NG + E+ VL LG K + + V +
Sbjct: 70 LPMMQTIAKNKDQGCFE-DYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEE-VEQL 127
Query: 134 KPVDADGDGNVNFEEFRSMMTTS 156
D +G +N+EE M+ +
Sbjct: 128 VAGHEDSNGCINYEELVRMVLSG 150
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F D N+DG I + +L + S+G + ++EL +++ + G ++ + F
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNFTMFL 78
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+ ++ E + +L +G + D K
Sbjct: 79 SIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 138
Query: 138 ADGDGNVNFEEFRSMMTTS 156
+G G ++ F +M+ S
Sbjct: 139 VEG-GKFDYVRFVAMIKGS 156
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F D N+DG I + +L + S+G + ++EL +++ + G ++ + F
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNFTMFL 78
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+ ++ E + +L +G + D K
Sbjct: 79 SIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 138
Query: 138 ADGDGNVNFEEFRSMMTTS 156
+G G ++ F +M+ S
Sbjct: 139 VEG-GKFDYVRFVAMIKGS 156
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F D N+DG I + +L + S+G + ++EL +++ + G ++ + F
Sbjct: 19 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNFTMFL 74
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+ ++ E + +L +G + D K
Sbjct: 75 SIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 134
Query: 138 ADGDGNVNFEEFRSMMTTS 156
+G G ++ F +M+ S
Sbjct: 135 VEG-GKFDYVRFVAMIKGS 152
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
SREE+ K F FD + G I++ +L V K +G + EEEL ++ + D + D I E
Sbjct: 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 77 FETICRTSS 85
F I + +S
Sbjct: 67 FIRIMKKTS 75
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 87 AAGEAELRE----AFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDG 142
+GE + RE AF L+D D +G I+ ++L V LG + + MI D + D
Sbjct: 1 GSGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 143 NVNFEEF-RSMMTTSL 157
++ +EF R M TSL
Sbjct: 61 EIDEDEFIRIMKKTSL 76
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+E+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 79 VMMVRCMK 86
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V++ +G + EEL +++++D D G + E+
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
E + AFD++ ++G IS +EL V+ LG + + MI VD DG G V+F+E+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 151 SMMTTSLK 158
MM +K
Sbjct: 79 VMMARCMK 86
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V++ +G + EEL +++++D D G + E+
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 68 KDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR 119
+DG IS E + R EL+E D D+D +G + +E +++ R
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMAR 83
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKS----MG-SSY-------KEEELVRVMEDLD 65
E+++ FN +D NKDG I+ E+ ++KS MG +Y E + R E +D
Sbjct: 8 HEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMD 67
Query: 66 TDKDGFISLSEFETICRTSSGAAGEAELRE 95
++DG +++ EF C+ +L E
Sbjct: 68 RNQDGVVTIEEFLEACQKDENIMSSMQLFE 97
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRL 120
+L+ AF+LYD +K+G I+ EE+ ++ +
Sbjct: 10 KLKWAFNLYDINKDGYITKEEMLAIMKSI 38
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 69 DGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN--RLGIKCSV 126
D F + F + TS A ++++AF + DQDK+G I +EL L L + +
Sbjct: 23 DSFNHKAFFAKVGLTSKSAD---DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALT 79
Query: 127 DG-CVAMIKPVDADGDGNVNFEEFRSMM 153
DG +K D+DGDG + +EF +++
Sbjct: 80 DGETKTFLKAGDSDGDGKIGVDEFTALV 107
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 72 ISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN--RLGIKCSVDG- 128
S F C S +A + +++AF DQDK+G I +EL L L + G + D
Sbjct: 25 FSYKAFFAKCGLSGKSADD--IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAE 82
Query: 129 CVAMIKPVDADGDGNVNFEEFRSMM 153
A +K D+DGDG + EE+ +++
Sbjct: 83 TKAFLKAGDSDGDGAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 72 ISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN--RLGIKCSVDG- 128
S F C S +A + +++AF DQDK+G I +EL L L + G + D
Sbjct: 24 FSYKAFFAKCGLSGKSADD--IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAE 81
Query: 129 CVAMIKPVDADGDGNVNFEEFRSMM 153
A +K D+DGDG + EE+ +++
Sbjct: 82 TKAFLKAGDSDGDGAIGVEEWVALV 106
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 92 ELREAFDLY---DQDKNGLISAEELNLVLNRLG--IKCSVDGCVAMIKPVDADGDGNVNF 146
E++ AF+++ + D N IS EEL LV+ LG + + MI+ VD +GDG V+F
Sbjct: 6 EIKGAFEVFAAKEGDPNQ-ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSF 64
Query: 147 EEFRSMM 153
EEF MM
Sbjct: 65 EEFLVMM 71
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKS-MGSSYKEEELVRVMEDLDTDKDGFISLSEFET 79
+ +F + D ++ G IS TEL L + + + + ++ D + ++ SEF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 80 ICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAD 139
+ + + + + F YD+D +G+I EL L+ G + S +I+ D
Sbjct: 66 VWKYIT------DWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQ 117
Query: 140 GDGNVNFEEF 149
G G + F++F
Sbjct: 118 GRGQIAFDDF 127
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 88 AGEAELREAFDLYDQDKNGLISAEELNLVL-NRLGIKCSVDGCVAMIKPVDADGDGNVNF 146
A ++ L F D+D++G+IS EL L N + ++I D + VNF
Sbjct: 1 ADQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 60
Query: 147 EEF 149
EF
Sbjct: 61 SEF 63
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRL--GIKCSVDG-CVAMIKPVDADGDGNVNFEE 148
++++AF + DQDK+G I +EL L L G + D A +K D+DGDG + +E
Sbjct: 43 DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDE 102
Query: 149 FRSMM 153
+ +++
Sbjct: 103 WAALV 107
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELA-----TVLKSMGSSYKEEELVRVMEDL------D 65
+R+E ++ +Q +IS+ E A ++LK G EE+ + V++ L D
Sbjct: 57 TRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKG----EEKAMAVIQSLIMYDCID 112
Query: 66 TDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN 118
TDKDG++SL EF+ + + + F+ D +KNG IS +E + +N
Sbjct: 113 TDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 51 SYKEEELVRVMEDLDTDKDGFISLSEFETIC-RTSSGAAGEAE----LREAFDLYDQDKN 105
+Y ++ M+ +D DGFIS ++E I R + A AE R+ F L D+
Sbjct: 10 AYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEF-LRVADQL 68
Query: 106 GL-----ISAEE--LNLVLNRLGIK-----CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
GL IS EE +N + L +K +V + M +D D DG V+ EF++ +
Sbjct: 69 GLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFL 128
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 97 FDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
+D D DK+G +S E L +G + D + +D + +G ++ +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 18/150 (12%)
Query: 16 VSREEMQKIFNQFDAN-KDGKISLTELATVLKSM---GSSYKEEELVRVMEDLDTDKDGF 71
+ E+Q+ + F + G +S+ E + + G + K E V D + DG
Sbjct: 22 FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAE--HVFRTFDANGDGT 79
Query: 72 ISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLIS-AEELNLVLNRLGIKCSV---- 126
I EF +S E +L+ AF +YD D NG IS AE L +V + SV
Sbjct: 80 IDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMP 139
Query: 127 -------DGCVAMIKPVDADGDGNVNFEEF 149
+ + +D + DG ++ EEF
Sbjct: 140 EDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 22 QKIFNQFDANKDGKISLTELATVLKS 47
+KIF Q D N+DGK+SL E KS
Sbjct: 150 EKIFRQMDTNRDGKLSLEEFIRGAKS 175
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+E ++ F D +KDG IS ++ S+G E+EL ++ + G I+ + F
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV----AEAPGPINFTMFL 112
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
TI +G E + AF+L+D+ +G E L L G K S D +
Sbjct: 113 TIFGDRIAGTDEEDVIVNAFNLFDE-GDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAP 171
Query: 138 ADGDGNVNFEEFRSMMTTSLK 158
DG+G ++ ++F ++T K
Sbjct: 172 IDGNGLIDIKKFAQILTKGAK 192
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
EE+++ F +FD +KDG I+ +L +++MG E EL+ + + ++ + G + +F
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 68
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
ELREAF +D+DK+G I+ +L + +G + + + + ++ + G+V+F++F
Sbjct: 11 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 70
Query: 152 MMTTSL 157
+M L
Sbjct: 71 LMGPKL 76
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELRE 95
EEL + D DKDG+I+ + RT E EL E
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIE 50
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELA-----TVLKSMGSSYKEEELVRVMEDL------D 65
+R+E ++ +Q +IS+ E A ++LK G EE+ V++ L D
Sbjct: 57 TRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKXKG----EEKAXAVIQSLIXYDCID 112
Query: 66 TDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN 118
TDKDG++SL EF+ + + + F+ D +KNG IS +E + +N
Sbjct: 113 TDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 97 FDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
+D D DK+G +S E L +G + D + +D + +G ++ +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 69 DGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN--RLGIKCSV 126
D F + F + TS A ++++AF + DQDK+G I +EL L L + +
Sbjct: 22 DSFNHKAFFAKVGLTSKSAD---DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALT 78
Query: 127 DG-CVAMIKPVDADGDGNVNFEEFRSMM 153
DG +K D+DGDG + +E+ +++
Sbjct: 79 DGETKTFLKAGDSDGDGKIGVDEWTALV 106
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 30 ANKDGKISLTELATVLKSMG--SSYKEEEL--VRVMED-LDTDKDGFISLSEFETICRTS 84
A +DG+I EL L G YK L R+M LD D G + +EF+ +
Sbjct: 43 AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL 102
Query: 85 SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNV 144
+G R+ F +D D++G + +EL L +G + S ++ K +G +
Sbjct: 103 NG------WRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKI 154
Query: 145 NFEEF 149
F+++
Sbjct: 155 TFDDY 159
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 104 KNGLISAEELNLVLNRLGI-----KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
++G I A+EL L + GI +++ C M+ +D D G + F EF+ +
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 99
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 2 AATTEADSNRKQLIVSREEMQKIFNQF---DANKDGKISLTEL----ATVLKSMGSSYKE 54
A + DS R++ S+ + ++ ++F D NK G +S +L A + +G
Sbjct: 9 AVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGD---- 64
Query: 55 EELVRVMEDL------DTDKDGFIS-LSEFETI----CRTSSGAAGEA------ELREAF 97
R++E D GF+ L+ F + T E +L AF
Sbjct: 65 ----RIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAF 120
Query: 98 DLYDQDKNGLISAEELNLVLNRL-GIKCSVDGCVAM----IKPVDADGDGNVNFEEF 149
LYD D++G IS E+ VL + G++ + + + ++ D DGDG V+F EF
Sbjct: 121 QLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRL--GIKC-SVDGCVAMIKPVDADGDGNVNFE 147
++L+E F + D D++G I +EL L R G + + + D DGDG + E
Sbjct: 41 SQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAE 100
Query: 148 EFRSMMTT 155
EF+ M+ +
Sbjct: 101 EFQEMVQS 108
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 47 SMGSSYKEEELVRVMEDLDTDKDGFIS-------LSEFETICRTSSGAAGEAELREAFDL 99
S SS + +E+ R+ LD D+ GFI L FE+ R + + + L A
Sbjct: 36 SKKSSSQLKEIFRI---LDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAA--- 89
Query: 100 YDQDKNGLISAEELN 114
D D +G I AEE
Sbjct: 90 -DHDGDGKIGAEEFQ 103
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F+ D ++DG +S ++ + + +G + ++EL +++ + G ++ + F
Sbjct: 6 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFL 61
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+ + ++ E + +L +G + D K
Sbjct: 62 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 121
Query: 138 ADGDGNVNFEEFRSMMTTS 156
+G G ++ +F +M+ S
Sbjct: 122 VEG-GKFDYVKFTAMIKGS 139
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E++EAF + D D++G +S E++ + +LG AM+K + G +NF F S
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLS 62
Query: 152 MMTTSL 157
+ + L
Sbjct: 63 IFSDKL 68
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSS-YKEEELVRVMEDLDTDKDGFISLSEF 77
EE+ + F FDAN DG I E +++ +G + E+ M++ D D +G I + EF
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
Query: 78 ETICRTSSGAAGEA 91
+ + S A E+
Sbjct: 68 MDLIKKSKNALKES 81
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVA-MIKPVDADGDGNVNFEE 148
E E+ AF ++D + +G+I +E ++ ++G + D V +K D DG+G ++ E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 149 FRSMMTTS 156
F ++ S
Sbjct: 67 FMDLIKKS 74
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 54 EEELVRVMEDLDTDKDGFISLSEFETIC-RTSSGAAGEAELREAFDLYDQDKNGLISAEE 112
EEE++R + D + DG I EF+ I + +AE+ EA D+D NG+I E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 113 L 113
Sbjct: 67 F 67
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F+ D ++DG +S ++ + + +G + ++EL +++ + G ++ + F
Sbjct: 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFL 73
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+ + ++ E + +L +G + D K
Sbjct: 74 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 133
Query: 138 ADGDGNVNFEEFRSMMTTS 156
+G G ++ +F +M+ S
Sbjct: 134 VEG-GKFDYVKFTAMIKGS 151
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E++EAF + D D++G +S E++ + +LG AM+K + G +NF F S
Sbjct: 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLS 74
Query: 152 MMTTSL 157
+ + L
Sbjct: 75 IFSDKL 80
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F+ D ++DG +S ++ + + +G + ++EL +++ + G ++ + F
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFL 62
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+ + ++ E + +L +G + D K
Sbjct: 63 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 122
Query: 138 ADGDGNVNFEEFRSMMTTS 156
+G G ++ +F +M+ S
Sbjct: 123 VEG-GKFDYVKFTAMIKGS 140
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E++EAF + D D++G +S E++ + +LG AM+K + G +NF F S
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLS 63
Query: 152 MMTTSL 157
+ + L
Sbjct: 64 IFSDKL 69
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 24/127 (18%)
Query: 24 IFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT 83
+FN FD NKDG+I +E L +E+L + D D DG+I+ +E I
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 84 SSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGN 143
+Y N + EE N R VD AM+ D + DG
Sbjct: 128 ---------------IYQMVGNTVELPEEENTPEKR------VDRIFAMM---DKNADGK 163
Query: 144 VNFEEFR 150
+ +EF+
Sbjct: 164 LTLQEFQ 170
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKS----MGSSYKE--------EELVRVMEDLD 65
E+++ FN +D NKDG I+ E+ ++KS MG E + R + +D
Sbjct: 164 HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMD 223
Query: 66 TDKDGFISLSEFETICRTSSGAAGEAELRE 95
++DG +++ EF C+ +L E
Sbjct: 224 RNQDGVVTIDEFLETCQKDENIMNSMQLFE 253
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 24 IFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT 83
+FN FDA+ +G I + L + E+L D +KDG I+ E I ++
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 84 SSGAAGEAE---LRE---------AFDLYDQDKNGLISAEEL 113
G LRE F D++++G+++ +E
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL 120
D D +G I +F +L+ AF+LYD +K+G I+ EE+ ++ +
Sbjct: 138 FDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 28/123 (22%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
++R+E Q I+++F D K +Y + V D + DG +
Sbjct: 43 ITRQEFQTIYSKFFPEADPK---------------AYAQ----HVFRSFDANSDGTLDFK 83
Query: 76 EFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
E+ +S +L AF LYD D NG IS E+ + V MI P
Sbjct: 84 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEI---------VTAIFKMISP 134
Query: 136 VDA 138
D
Sbjct: 135 EDT 137
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 28/123 (22%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
++R+E Q I+++F D K +Y + V D + DG +
Sbjct: 44 ITRQEFQTIYSKFFPEADPK---------------AYAQ----HVFRSFDANSDGTLDFK 84
Query: 76 EFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
E+ +S +L AF LYD D NG IS E+ + V MI P
Sbjct: 85 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEI---------VTAIFKMISP 135
Query: 136 VDA 138
D
Sbjct: 136 EDT 138
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 28/123 (22%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
++R+E Q I+++F D K +Y + V D + DG +
Sbjct: 43 ITRQEFQTIYSKFFPEADPK---------------AYAQ----HVFRSFDANSDGTLDFK 83
Query: 76 EFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
E+ +S +L AF LYD D NG IS E+ L I V MI P
Sbjct: 84 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV------LEI---VTAIFKMISP 134
Query: 136 VDA 138
D
Sbjct: 135 EDT 137
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 28/123 (22%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
++R+E Q I+++F D K +Y + V D + DG +
Sbjct: 43 ITRQEFQTIYSKFFPEADPK---------------AYAQ----HVFRSFDANSDGTLDFK 83
Query: 76 EFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
E+ +S +L AF LYD D NG IS E+ + V MI P
Sbjct: 84 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEI---------VTAIFKMISP 134
Query: 136 VDA 138
D
Sbjct: 135 EDT 137
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 60 VMEDLDTDKDGFISLSEFETICRTSSGAAGEAELRE-----AFDLYDQDKNGLISAEELN 114
+++ +D+D G I +EF + A +L + AF ++D D +G I+ EL
Sbjct: 92 LLDQIDSDGSGKIDYTEF------IAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELA 145
Query: 115 LVL---NRLG--IKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+L N+ G + V+ MI+ VD + DG ++F EF MM
Sbjct: 146 HILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM 189
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 79 TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDA 138
TI S +L+ F + D+D G I+ E+L L + G+K + + ++ +D+
Sbjct: 40 TIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL-LLDQIDS 98
Query: 139 DGDGNVNFEEF 149
DG G +++ EF
Sbjct: 99 DGSGKIDYTEF 109
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVL-----KSMGSSYKEEELVRVMEDL 64
+RKQL S++ + F FD + DG+I+ ELA +L K + + R++ D+
Sbjct: 115 DRKQL--SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDV 172
Query: 65 DTDKDGFISLSEFETICR 82
D + DG I EF + +
Sbjct: 173 DKNNDGKIDFHEFSEMMK 190
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F+ D ++DG +S ++ + + +G + ++EL +++ + G ++ + F
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFL 62
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+ + ++ E + +L +G + D K
Sbjct: 63 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 122
Query: 138 ADGDGNVNFEEFRSMM 153
+G G ++ +F +M+
Sbjct: 123 VEG-GKFDYVKFTAMI 137
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E++EAF + D D++G +S E++ + +LG AM+K + G +NF F S
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLS 63
Query: 152 MMTTSL 157
+ + L
Sbjct: 64 IFSDKL 69
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 11 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSS-------YKEEELVRVMED 63
R Q + S EE K + ++D + G I EL LK + K E +M
Sbjct: 95 RCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLK 154
Query: 64 L-DTDKDGFISLSEFETICRTSSGAAGE--------AELREAFDLYDQDKNGLISAEELN 114
L D++ DG + L+E + + E +AF+LYDQD NG I EL+
Sbjct: 155 LFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELD 214
Query: 115 LVLNRL 120
+L L
Sbjct: 215 ALLKDL 220
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 31/162 (19%)
Query: 20 EMQKIFNQFDANKDGKISLTELATVL------------KSMGSSYKEEELVRVMEDLDTD 67
EM+ +Q+ DGKI + ELA VL + + S EE ++ DTD
Sbjct: 59 EMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSC---EEFMKTWRKYDTD 115
Query: 68 KDGFISLSEFETICR----TSSGAAGEAELREAFD----LYDQDKNGLISAEEL------ 113
GFI E + + ++ + +L E D L+D + +G + E+
Sbjct: 116 HSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175
Query: 114 --NLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
N +L GIK + D DG+G ++ E +++
Sbjct: 176 QENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALL 217
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDK--DGFISLSE 76
++ ++ F FD D KI+ +++ + +++G + E+ +++ + ++ I+ E
Sbjct: 6 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEE 65
Query: 77 FETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMI 133
F + + ++ + + E ++D++ NG + EL VL LG K + + ++
Sbjct: 66 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM 125
Query: 134 KPVDADGDGNVNFEEF 149
K + D +G +N+E F
Sbjct: 126 KGQE-DSNGCINYEAF 140
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDK--DGFISLSE 76
++ ++ F FD D KI+ +++ + +++G + E+ +++ + ++ I+ E
Sbjct: 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEE 67
Query: 77 FETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMI 133
F + + ++ + + E ++D++ NG + EL VL LG K + + ++
Sbjct: 68 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM 127
Query: 134 KPVDADGDGNVNFEEF 149
K + D +G +N+E F
Sbjct: 128 KGQE-DSNGCINYEAF 142
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
EL E F D D +G IS ELN L+ G+ S+ ++ D + G + F+EF+
Sbjct: 28 ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKD 87
Query: 152 M 152
+
Sbjct: 88 L 88
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELN 114
+EL+ +DTD G IS+ E ++ A + +YD++ +G I+ +E
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 115 LVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 156
+ + + D+ GDG ++ E R+ + +S
Sbjct: 87 ------DLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSS 122
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
+EM++ F+ D ++DG +S ++ + + +G + ++EL +++ + G ++ + F
Sbjct: 4 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFL 59
Query: 79 TICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
+I SG E +R AF ++D+ + ++ E + +L +G + D K
Sbjct: 60 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 119
Query: 138 ADGDGNVNFEEFRSMM 153
+G G ++ +F +M+
Sbjct: 120 VEG-GKFDYVKFTAMI 134
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRS 151
E++EAF + D D++G +S E++ + +LG AM+K + G +NF F S
Sbjct: 5 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLS 60
Query: 152 MMTTSL 157
+ + L
Sbjct: 61 IFSDKL 66
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKE---EELVRVMEDLDTDKDGFIS 73
S ++++K+F+ D +KDG I EL ++LK S ++ +E +M D D DG I
Sbjct: 39 SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 98
Query: 74 LSEFETICRTS 84
+ EF T+ S
Sbjct: 99 VEEFSTLVAES 109
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKC---SVDGCVAMIKPVDADGDGNVNFEE 148
++++ F + D+DK+G I +EL +L S ++ D DGDG + EE
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 149 FRSMMTTS 156
F +++ S
Sbjct: 102 FSTLVAES 109
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLY---DQDKNGLISAE 111
+++ +V LD DKDGFI E +I + S A + +E L D+D +G I E
Sbjct: 41 DDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 112 ELNLVL 117
E + ++
Sbjct: 101 EFSTLV 106
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 28/123 (22%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
++R+E Q I+++F D K +Y + V D + DG +
Sbjct: 43 ITRQEFQTIYSKFFPEADPK---------------AYAQ----HVFRSFDANSDGTLDFK 83
Query: 76 EFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
++ +S +L AF LYD D NG IS E+ + V MI P
Sbjct: 84 QYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEI---------VTAIFKMISP 134
Query: 136 VDA 138
D
Sbjct: 135 EDT 137
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 28/123 (22%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLS 75
++R+E Q I+++F D K +Y + V D + DG +
Sbjct: 43 ITRQEFQTIYSKFFPEADPK---------------AYAQ----HVFRSFDANSDGTLDFK 83
Query: 76 EFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKP 135
++ +S +L AF LYD D NG IS E+ + V MI P
Sbjct: 84 QYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEI---------VTAIFKMISP 134
Query: 136 VDA 138
D
Sbjct: 135 EDT 137
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 30 ANKDGKISLTELATVLKSMG--SSYKEEEL--VRVMED-LDTDKDGFISLSEFETICRTS 84
A +DG+I EL L G YK L R+M LD D G + +EF+ +
Sbjct: 43 AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL 102
Query: 85 SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNV 144
+G R+ F D D++G + +EL L +G + S ++ K +G +
Sbjct: 103 NG------WRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKI 154
Query: 145 NFEEF 149
F+++
Sbjct: 155 TFDDY 159
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 104 KNGLISAEELNLVLNRLGI-----KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
++G I A+EL L + GI +++ C M+ +D D G + F EF+ +
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 99
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRL--GIKCSVDG-CVAMIKPVDADGDGNVNFEE 148
++++AF + DQDK+G I +EL L L + D A + D DGDG + +E
Sbjct: 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDE 101
Query: 149 FRSMM 153
F +M+
Sbjct: 102 FAAMI 106
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYK---EEELVRVMEDLDTDKDGFIS 73
S ++++K F D +K G I EL L++ S + + E + D D D DG I
Sbjct: 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIG 98
Query: 74 LSEFETICRT 83
+ EF + +
Sbjct: 99 VDEFAAMIKA 108
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDG-------CVAMIKPVDADGDGNV 144
++++ F D D +G I EEL VL + DG A +K D DGDG +
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSF----AADGRDLTDAETKAFLKAADKDGDGKI 98
Query: 145 NFEEFRSMM 153
+EF +++
Sbjct: 99 GIDEFETLV 107
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 2 AATTEADSNRKQLI-------VSREEMQKIFNQFDANKDGKISLTELATVLKSM---GSS 51
A E N K+ +S +++K+F DA+ G I EL VLKS G
Sbjct: 18 AVKAEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD 77
Query: 52 YKEEELVRVMEDLDTDKDGFISLSEFETICRTS 84
+ E ++ D D DG I + EFET+ +
Sbjct: 78 LTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
++++F D + G I+ EL LK +GS E E+ +M+ D DK G I EF
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 93 LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
L+E F + D D +G I+ +EL L R+G + ++ D D G +++ EF
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 46 KSMGSSYKEEE---LVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQ 102
K M EEE L + + +DTD G I+ E + + E+E+++ D D
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 103 DKNGLISAEEL 113
DK+G I E
Sbjct: 71 DKSGTIDYGEF 81
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 69 DGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN--RLGIKCSV 126
D F + F + TS A ++++AF + QDK+G I +EL L L + +
Sbjct: 22 DSFNHKAFFAKVGLTSKSAD---DVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALT 78
Query: 127 DG-CVAMIKPVDADGDGNVNFEEFRSMM 153
DG +K D+DGDG + +E+ +++
Sbjct: 79 DGETKTFLKAGDSDGDGKIGVDEWTALV 106
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 30 ANKDGKISLTELATVLKSMG--SSYKEEEL--VRVMED-LDTDKDGFISLSEFETICRTS 84
A +DG+I EL L G YK L R+M LD D G + +EF+ +
Sbjct: 12 AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL 71
Query: 85 SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIK 123
+G R+ F +D D++G + +EL L +G +
Sbjct: 72 NG------WRQHFISFDSDRSGTVDPQELQKALTTMGFR 104
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 104 KNGLISAEELNLVLNRLGI-----KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
++G I A+EL L + GI +++ C M+ +D D G + F EF+ +
Sbjct: 14 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 68
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRL---GIKCSVDGCVAMIKPVDADGDGNVNF 146
+A+++E F++ D+D++G I EEL VL G + A++ D+D DG +
Sbjct: 40 DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGA 99
Query: 147 EEFRSMMTTS 156
+EF M+ +
Sbjct: 100 DEFAKMVAQA 109
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 59 RVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELN--- 114
R+ + D ++G I EF ++ A +++ AF LYD + G I EEL
Sbjct: 78 RIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
Query: 115 --------LVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKPG 160
LVL+ I+ VD D DG ++ +E++ + SL P
Sbjct: 138 VALLHESELVLSEDMIEVMVDKAFVQ---ADRKNDGKIDIDEWKDFV--SLNPS 186
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRL---GIKCSVDGCVAMIKPVDADGDGNVNFEE 148
++++ F + D+DK+G I +EL +L S ++ D DGDG + EE
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 149 FRSMMTTS 156
F +++ S
Sbjct: 102 FSTLVAES 109
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKE---EELVRVMEDLDTDKDGFIS 73
S ++++K+F+ D +K G I EL ++LK S + +E +M D D DG I
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIG 98
Query: 74 LSEFETICRTS 84
+ EF T+ S
Sbjct: 99 VEEFSTLVAES 109
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLY---DQDKNGLISAE 111
+++ +V LD DK GFI E +I + S A + +E L D+D +G I E
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 112 ELNLVL 117
E + ++
Sbjct: 101 EFSTLV 106
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 59 RVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELN--- 114
R+ + D ++G I EF ++ A +++ AF LYD + G I EEL
Sbjct: 78 RIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
Query: 115 --------LVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKPG 160
LVL+ I+ VD D DG ++ +E++ + SL P
Sbjct: 138 VALLHESELVLSEDMIEVMVDKAFVQ---ADRKNDGKIDIDEWKDFV--SLNPS 186
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRL-GIKCSVD--GCVA--MIKPVDADGDGNVNF 146
+L AF LYD DK+ IS +EL VL + G+ S + G +A I+ D DGD ++F
Sbjct: 114 KLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISF 173
Query: 147 EEF 149
EF
Sbjct: 174 TEF 176
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 25 FNQFDANKDGKISLTELATVLKSM-GSSYKEEELV----RVMEDLDTDKDGFISLSEF 77
F +D +KD KIS EL VL+ M G + +E+L R +++ D D D IS +EF
Sbjct: 119 FRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKS---MGSSYKEEELVR---------VMEDLD 65
E+++ FN +D NKDG I+ E+ ++K+ M +Y L + +D
Sbjct: 88 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMD 147
Query: 66 TDKDGFISLSEFETICR 82
+KDG ++L EF C+
Sbjct: 148 KNKDGIVTLDEFLESCQ 164
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 22 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC 81
+FN FD + G + + T L + E+L D +KDG+I+ E I
Sbjct: 56 HYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 115
Query: 82 RTSSGAAG--------EAELREAFDLY----DQDKNGLISAEEL 113
+ G E R+ D++ D++K+G+++ +E
Sbjct: 116 KAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKC---SVDGCVAMIKPVDADGDGNVNFEE 148
++++ F + D+DK+G I +EL +L S ++ D DGDG + EE
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 149 FRSMMTTS 156
F +++ S
Sbjct: 102 FSTLVAES 109
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKE---EELVRVMEDLDTDKDGFIS 73
S ++++K+F+ D +K G I EL ++LK S ++ +E +M D D DG I
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 98
Query: 74 LSEFETICRTS 84
+ EF T+ S
Sbjct: 99 VEEFSTLVAES 109
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLY---DQDKNGLISAE 111
+++ +V LD DK GFI E +I + S A + +E L D+D +G I E
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 112 ELNLVL 117
E + ++
Sbjct: 101 EFSTLV 106
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 16 VSREEMQKIFNQF---DANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFI 72
+ ++ +I+ F D ++ G + + EL G + +R+M DTD +G I
Sbjct: 45 IPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHI 104
Query: 73 SLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI 122
S EF + + A F + D++++G + E+ L +LG
Sbjct: 105 SFYEFMAMYKFMELAY------NLFVMNDRNRSGTLEPHEILPALQQLGF 148
Score = 33.1 bits (74), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 101 DQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSM 152
D+D++G + EL + GI+ S + M++ D D +G+++F EF +M
Sbjct: 61 DRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKC---SVDGCVAMIKPVDADGDGNVNFEE 148
++++ F + D+DK+G I +EL +L S ++ D DGDG + EE
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 149 FRSMMTTS 156
F +++ S
Sbjct: 66 FSTLVAES 73
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKE---EELVRVMEDLDTDKDGFIS 73
S ++++K+F+ D +K G I EL ++LK S ++ +E +M D D DG I
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 74 LSEFETICRTS 84
+ EF T+ S
Sbjct: 63 VEEFSTLVAES 73
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLY---DQDKNGLISAE 111
+++ +V LD DK GFI E +I + S A + +E L D+D +G I E
Sbjct: 5 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 64
Query: 112 ELNLVL 117
E + ++
Sbjct: 65 EFSTLV 70
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRL-GIKCSVD--GCVA--MIKPVDADGDGNVNF 146
+L AF LYD DK+ IS +EL VL + G+ S + G +A I+ D DGD ++F
Sbjct: 114 KLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISF 173
Query: 147 EEF 149
EF
Sbjct: 174 TEF 176
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 25 FNQFDANKDGKISLTELATVLKSM-GSSYKEEELV----RVMEDLDTDKDGFISLSEF 77
F +D +KD KIS EL VL+ M G + +E+L R +++ D D D IS +EF
Sbjct: 119 FRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 69 DGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN--RLGIKCSV 126
D F + F + TS A ++++AF + QDK+G I +EL L L + +
Sbjct: 22 DSFNHKAFFAKVGLTSKSAD---DVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALT 78
Query: 127 DG-CVAMIKPVDADGDGNVNFEEFRSMM 153
DG +K D+DGDG + +++ +++
Sbjct: 79 DGETKTFLKAGDSDGDGKIGVDDWTALV 106
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEE-LNLV--LNRL 120
DT+ D I E+ E +L+ F +YD+D+NG I +E L++V + +L
Sbjct: 68 FDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKL 127
Query: 121 GIKCSVDGCV----AMIKP----------VDADGDGNVNFEEF 149
CSV+ ++ P VD +GDG ++ EF
Sbjct: 128 KKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 22 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC 81
+FN FD + G + + T L + E+L D +KDG+I+ E I
Sbjct: 56 HYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 115
Query: 82 RTSSGAAGEAEL--------REAFDLY----DQDKNGLISAEEL 113
+ G+ R+ D++ D++K+G+++ +E
Sbjct: 116 KAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKS---MGSSYK----EEELVR-----VMEDLD 65
E+++ FN +D NKDG I+ E+ ++K+ M Y +E+ R + +D
Sbjct: 88 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 147
Query: 66 TDKDGFISLSEFETICR 82
+KDG ++L EF C+
Sbjct: 148 KNKDGIVTLDEFLESCQ 164
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 22 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC 81
+FN FD + G + + T L + E+L D +KDG+I+ E I
Sbjct: 92 HYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 151
Query: 82 RTSSGAAGEAEL--------REAFDLY----DQDKNGLISAEEL 113
+ G+ R+ D++ D++K+G+++ +E
Sbjct: 152 KAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKS---MGSSYK----EEELVR-----VMEDLD 65
E+++ FN +D NKDG I+ E+ ++K+ M Y +E+ R + +D
Sbjct: 124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 183
Query: 66 TDKDGFISLSEFETICR 82
+KDG ++L EF C+
Sbjct: 184 KNKDGIVTLDEFLESCQ 200
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 17 SREEMQKIFNQFDANKDGKISL--------TELATVLKSMGSSYKEEELVRVMEDLDTDK 68
S EE++ IF ++D DG++S TE ++LK M + L + E+LD +
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNG 56
Query: 69 DGFISLSEFETICRTSS 85
DG +S EF+ + + S
Sbjct: 57 DGEVSFEEFQVLVKKIS 73
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 22 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC 81
+FN FD + G + + T L + E+L D +KDG+I+ E I
Sbjct: 59 HYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 118
Query: 82 RTSSGAAGEAEL--------REAFDLY----DQDKNGLISAEEL 113
+ G+ R+ D++ D++K+G+++ +E
Sbjct: 119 KAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 12/72 (16%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKS----MGS-SYK--EEELVR-----VMEDLD 65
E+++ FN +D NKDG I+ E+ ++K+ MG +Y +E+ R + +D
Sbjct: 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 150
Query: 66 TDKDGFISLSEF 77
+KDG ++L EF
Sbjct: 151 KNKDGIVTLDEF 162
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKC---SVDGCVAMIKPVDADGDGNVNFEE 148
++++ F + D+DK+G I +EL +L S ++ D DGDG + +E
Sbjct: 43 DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDE 102
Query: 149 FRSMMTTS 156
F +++ S
Sbjct: 103 FSTLVAES 110
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKE---EELVRVMEDLDTDKDGFIS 73
S ++++K+F+ D +K G I EL +LK ++ +E +M D D DG I
Sbjct: 40 SADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIG 99
Query: 74 LSEFETICRTS 84
+ EF T+ S
Sbjct: 100 VDEFSTLVAES 110
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 22 QKIFNQFDANKDGKISLTELA-----TVLKSMGSSYKEEELVR-----------VMEDLD 65
+ +FN D N +GKISL E+ V+ ++G++ ++ + + + ++
Sbjct: 19 KHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVE 78
Query: 66 TDKDGFI------SLSEFETICR---TSSGAAGEAELREAFDLYDQDKNGLISAEELNLV 116
TD +I + E E + T G+A FD+ D+D+NG I+ +E
Sbjct: 79 TDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDA----LFDIVDKDQNGAITLDEWKAY 134
Query: 117 LNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
GI S + C + D D G ++ +E
Sbjct: 135 TKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 54 EEELVRVMED-----LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLI 108
E L+R+ D +D D++G I+L E++ + + + E F + D D++G +
Sbjct: 103 EPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQL 162
Query: 109 SAEELNLVLNRLGIKCSVD 127
+E + LG ++D
Sbjct: 163 DVDE--MTRQHLGFWYTMD 179
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRL---GIKCSVDGCVAMIKPVDADGDGNVNFEE 148
++++ F D D++G + EEL L + + + +++ D DGDG + EE
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEE 102
Query: 149 FRSMMTT 155
F+ M+ +
Sbjct: 103 FQEMVHS 109
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 59 RVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEEL 113
V D++ DG + E+ ++ +L AF LYD D NG IS E+
Sbjct: 75 HVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEV 129
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 22 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
Q +F FD+N DG + E L + ++L D D +G IS +E
Sbjct: 74 QHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNE 128
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 64 LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEE----LNLVLNR 119
DTD +G +S +F + +L AF+LYD +K+G I+ EE + + +
Sbjct: 111 FDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDM 170
Query: 120 LGIKCSV---------DGCVAMIKPVDADGDGNVNFEEF 149
+G KC+ + +D + DG V +EF
Sbjct: 171 MG-KCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKS----MGS-SY-------KEEELVRVMEDLD 65
+E++ FN +D NKDG I+ E+ ++K+ MG +Y + + + +D
Sbjct: 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMD 196
Query: 66 TDKDGFISLSEFETICRTSSGAAGEAELRE 95
+KDG +++ EF C+ +L E
Sbjct: 197 KNKDGVVTIDEFIESCQKDENIMRSMQLFE 226
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 24 IFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT 83
+FN FD + +G +S + L + +E+L D +KDG+I+ E I +
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 166
Query: 84 SSGAAGEA------------ELREAFDLYDQDKNGLISAEEL 113
G+ + F D++K+G+++ +E
Sbjct: 167 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 24 IFNQFDANKDGKISLT--ELATVLK---SMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
IF+++ + K +L+ EL +++ ++GS ++ E+ R+MEDLD +KD ++ E+
Sbjct: 15 IFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
Query: 79 TI 80
T
Sbjct: 75 TF 76
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 92 ELREAFDLYDQD-KNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
E + AFD++ ++G IS +EL V LG + + I VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 32 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+DG IS EL V + +G + EEL ++++D D G + EF
Sbjct: 32 EDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLGIKC---SVDGCVAMIKPVDADGDGNVNFEE 148
++++ F + D+DK+G I +EL +L S ++ D DG G + EE
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEE 101
Query: 149 FRSMMTTS 156
F +++ S
Sbjct: 102 FSTLVAES 109
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKE---EELVRVMEDLDTDKDGFIS 73
S ++++K+F+ D +K G I EL ++LK S ++ +E +M D D G I
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIE 98
Query: 74 LSEFETICRTS 84
+ EF T+ S
Sbjct: 99 VEEFSTLVAES 109
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLY---DQDKNGLISAE 111
+++ +V LD DK GFI E +I + S A + +E L D+D +G I E
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVE 100
Query: 112 ELNLVL 117
E + ++
Sbjct: 101 EFSTLV 106
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 23/149 (15%)
Query: 22 QKIFNQFDANKDGKISLTELA-----TVLKSMGSSYKEEELVR---------------VM 61
+ +FN D N +G+ISL E+ V+ ++G++ ++ + + V
Sbjct: 19 KHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVE 78
Query: 62 EDLDTDKDGFISLSEFETICRTSSGAAGEAELR--EAFDLYDQDKNGLISAEELNLVLNR 119
+ +G+ L+ E + R S L FD+ D+D+NG IS +E
Sbjct: 79 TEWPEYIEGWKRLAS-EELKRYSKNQITLIRLWGDALFDIIDKDQNGAISLDEWKAYTKS 137
Query: 120 LGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
GI S + C + D D G ++ +E
Sbjct: 138 AGIIQSSEDCEETFRVCDIDESGQLDVDE 166
Score = 29.3 bits (64), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 57 LVRVMED-----LDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAE 111
L+R+ D +D D++G ISL E++ +++ + E F + D D++G + +
Sbjct: 106 LIRLWGDALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVD 165
Query: 112 ELNLVLNRLGIKCSVD 127
E + LG ++D
Sbjct: 166 E--MTRQHLGFWYTMD 179
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMG---SSYKEEELVRVMEDLDT 66
++ Q+ + R +F+ D +++G ISL E KS G SS EE RV D
Sbjct: 100 SKNQITLIRLWGDALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRV---CDI 156
Query: 67 DKDGFISLSE 76
D+ G + + E
Sbjct: 157 DESGQLDVDE 166
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
SR + +++FN D G ++ + T+L M SS + +L + D D+DG ++ E
Sbjct: 12 SRLKYRQLFNSHDKTMSGHLTGPQARTIL--MQSSLPQAQLASIWNLSDIDQDGKLTAEE 69
Query: 77 F 77
F
Sbjct: 70 F 70
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 33.1 bits (74), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 101 DQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSM 152
D+D++G + EL + GI+ S + M++ D D +G+++F EF +M
Sbjct: 61 DRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
Query: 16 VSREEMQKIFNQF---DANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFI 72
+ ++ +I+ F D ++ G + + EL G + +R+M DTD +G I
Sbjct: 45 IPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHI 104
Query: 73 SLSEFETICRTSSGAAGEAELREAFDLYDQD---KNGLISAEELNLVLNRLGI 122
S EF + + + A++L+ + ++G + E+ L +LG
Sbjct: 105 SFYEFMAMYKF---------MELAYNLFVMNARARSGTLEPHEILPALQQLGF 148
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
A LR F D +++G + EE + L ++ + A+ + +DAD DG + F+EF
Sbjct: 27 ARLRSVFAACDANRSGRLEREEFRALCTELRVRPA--DAEAVFQRLDADRDGAITFQEFA 84
Query: 151 SMMTTSL 157
SL
Sbjct: 85 RGFLGSL 91
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
++ +F DAN+ G++ E + + + E V + LD D+DG I+ EF
Sbjct: 29 LRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAV--FQRLDADRDGAITFQEF 83
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 97 FDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
FD++D+D +G I+ +E GI S + C A + D D G+++ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 11 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDG 70
R + + RE +F+ FD + G I+L E K G S +E+ D D G
Sbjct: 105 RNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSG 164
Query: 71 FISLSE 76
+ + E
Sbjct: 165 DLDVDE 170
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 96 AFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
FD++D+D +G I+ +E GI S + C A + D D G+++ +E
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 11 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDG 70
R + + RE +F+ FD + G I+L E K G S +E+ D D G
Sbjct: 105 RNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSG 164
Query: 71 FISLSE 76
+ + E
Sbjct: 165 DLDVDE 170
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRL-GIKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
EL FD D N L+ EE + +L V+ A+ K +D +G G+V F+EF
Sbjct: 131 ELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFA 190
Query: 151 SMMTT 155
+ +
Sbjct: 191 AWASA 195
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 97 FDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
FD++D+D +G I+ +E GI S + C A + D D G+++ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 11 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDG 70
R + + RE +F+ FD + G I+L E K G S +E+ D D G
Sbjct: 105 RNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSG 164
Query: 71 FISLSE 76
+ + E
Sbjct: 165 DLDVDE 170
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 24 IFNQFDANKDGKISLT--ELATVLK---SMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
IF+++ + K +L+ EL +++ ++GS ++ E+V++M+DLD +KD ++ E+
Sbjct: 15 IFHKYSGKEGDKHTLSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYI 74
Query: 79 TIC 81
T
Sbjct: 75 TFL 77
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 32/138 (23%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE 76
+ + + +++N FD NKDG + E + + E++L + D D +G I +E
Sbjct: 55 ANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNE 114
Query: 77 FETICRTSSGAAGEAELREAFDLYDQDKNGLISAEE-LNLVLNRLGIKCSVDGCVAMIKP 135
+ G+ L S EE +NLV ++
Sbjct: 115 LLDMFMAVQALNGQQTL---------------SPEEFINLVFHK---------------- 143
Query: 136 VDADGDGNVNFEEFRSMM 153
+D + DG + EEF + M
Sbjct: 144 IDINNDGELTLEEFINGM 161
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 97 FDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
FD++D+D +G I+ +E GI S + C A + D D G+++ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 11 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDG 70
R + + RE +F+ FD + G I+L E K G S +E+ D D G
Sbjct: 105 RNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSG 164
Query: 71 FISLSE 76
+ + E
Sbjct: 165 DLDVDE 170
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 19/121 (15%)
Query: 15 IVSREEM----QKIFNQFDANKDGKISLTELATVLKSMGSSYKEE-------ELVRVMED 63
++S EE+ + +F++ A D +IS+ EL T+L + S +K+ E R M +
Sbjct: 526 VLSEEEIDDNFKTLFSKL-AGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVN 584
Query: 64 L-DTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI 122
L D D +G + L EF + F +D DK+G +SA E+ + + G
Sbjct: 585 LMDRDGNGKLGLVEFNILWNRIRNYL------TIFRKFDLDKSGSMSAYEMRMAIEAAGF 638
Query: 123 K 123
K
Sbjct: 639 K 639
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+SA EL +LN++ + +D C +M+ +D+D G + FEEF+ +
Sbjct: 747 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 800
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEF 149
IS +EL +LNR+ K S++ C +M+ +D DG+G + EF
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEF 599
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMG 49
S EE+ F FD N DG I + EL +L++ G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLG 121
E EL AF ++D++ +G I EEL +L G
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRL---GIKCSVDGCVAMIKPVDADGDGNVNFE 147
+++++ F D D++G + +EL L + + + +++ D DGDG + +
Sbjct: 41 SQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGAD 100
Query: 148 EFRSMMTT 155
EF+ M+ +
Sbjct: 101 EFQEMVHS 108
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKE---EELVRVMEDLDTDKDGFI 72
+S +++ IF D ++ G + EL L+ S +E E +M+ D D DG I
Sbjct: 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97
Query: 73 SLSEFETICRT 83
EF+ + +
Sbjct: 98 GADEFQEMVHS 108
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 97 FDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
FD++D+D +G I+ +E GI S + C A + D D G+++ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 11 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDG 70
R + + RE +F+ FD + G I+L E K G S +E+ D D G
Sbjct: 105 RNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAG 164
Query: 71 FISLSE 76
+ + E
Sbjct: 165 DLDVDE 170
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+SA EL +LN++ + +D C +M+ +D+D G + FEEF+ +
Sbjct: 31 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 84
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 29/153 (18%)
Query: 21 MQKIFNQFDANKDGKISLTELA-----TVLKSMGSS----YKEEELVRVM-------EDL 64
+ FN D N +GKISL E V+ ++G++ + ++ V +
Sbjct: 18 HKHXFNFLDVNHNGKISLDEXVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGXKYGV 77
Query: 65 DTDKDGFI------SLSEFETICR---TSSGAAGEAELREAFDLYDQDKNGLISAEELNL 115
+TD +I + E E + T G+A FD+ D+D+NG I+ +E
Sbjct: 78 ETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDA----LFDIVDKDQNGAITLDEWKA 133
Query: 116 VLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
GI S + C + D D G ++ +E
Sbjct: 134 YTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+SA EL +LN++ + +D C +M+ +D+D G + FEEF+ +
Sbjct: 31 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 84
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+SA EL +LN++ + +D C +M+ +D+D G + FEEF+ +
Sbjct: 20 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 73
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+SA EL +LN++ + +D C +M+ +D+D G + FEEF+ +
Sbjct: 20 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 73
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 29 DANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICR 82
D N DG+I+ E A L ++G S + E +DT+ +G +SL E T R
Sbjct: 112 DKNADGQINADEFAAWLTALGMS--KAEAAEAFNQVDTNGNGELSLDELLTAVR 163
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 14 LIVSREEMQKIFNQFDANKDGKISLTELATVLKSM 48
L +S+ E + FNQ D N +G++SL EL T ++
Sbjct: 131 LGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRDF 165
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 91 AELREAFDLYDQDKNGLISAEELNLVLNRLGIK-CSVDGCVAMIKPVDADGDGNVNFEEF 149
+EL + F L + LI+AE L LGI+ S + M++ D DGDG +N EF
Sbjct: 40 SELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEF 99
Query: 150 RSMM 153
+M
Sbjct: 100 CVLM 103
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 24 IFNQFDANKDGKISLT--ELATVLK---SMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
IF+++ + K +L+ EL +++ ++GS ++ E+ R+ EDLD +KD ++ E+
Sbjct: 15 IFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYV 74
Query: 79 TIC 81
T
Sbjct: 75 TFL 77
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGS-SYKEEELVRVMEDLDTDKDGFISLSEF 77
E+ ++ F D N DG I +L +MG + K EEL +++ + G I+ + F
Sbjct: 7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPINFTVF 62
Query: 78 ETIC-RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPV 136
T+ GA E + AF + D D G I L +L G + + + M
Sbjct: 63 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 122
Query: 137 DADGDGNVNFEEFRSMMT 154
D GNV+++ ++T
Sbjct: 123 PPDVAGNVDYKNICYVIT 140
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLG-IKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+ +EAF + DQ+ +G+I ++L +G + + AMIK + G +NF F
Sbjct: 8 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPINFTVFL 63
Query: 151 SMMTTSLK 158
+M LK
Sbjct: 64 TMFGEKLK 71
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+SA EL +LN++ + +D C +M+ +D+D G + FEEF+ +
Sbjct: 27 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 80
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGS-SYKEEELVRVMEDLDTDKDGFISLSEF 77
E+ ++ F D N DG I +L +MG + K EEL +++ + G I+ + F
Sbjct: 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPINFTVF 80
Query: 78 ETICRTS-SGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPV 136
T+ GA E + AF + D D G I L +L G + + + M
Sbjct: 81 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 140
Query: 137 DADGDGNVNFEEFRSMMT 154
D GNV+++ ++T
Sbjct: 141 PPDVAGNVDYKNICYVIT 158
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLG-IKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+ +EAF + DQ+ +G+I ++L +G + + AMIK + G +NF F
Sbjct: 26 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPINFTVFL 81
Query: 151 SMMTTSLK 158
+M LK
Sbjct: 82 TMFGEKLK 89
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMG--SSYKEEELVRVMEDLDTDKDGFISL-- 74
++M+ FN+ D +KDG I+ + ++ + S K E +M+ L D F++
Sbjct: 6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA 65
Query: 75 ------------SEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI 122
S E + + + E L F D +++ IS +E + LG+
Sbjct: 66 GGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL 125
Query: 123 KCSVDGCVAMIKPVDADGDGNVNFEEF 149
++ A +D + DG ++ EEF
Sbjct: 126 DKTM--APASFDAIDTNNDGLLSLEEF 150
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 154
ISA EL +L R+ K S++ C M+ +D+DG G + +EF + T
Sbjct: 547 ISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWT 601
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF- 77
E+ K F FD GK+S+ +L +L +G + E+ +++ ++ D +G I +F
Sbjct: 83 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 142
Query: 78 ETICR 82
E + R
Sbjct: 143 EDVLR 147
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 92 ELREAFDLYDQDKNGLISAEELNLVLNRLG-IKCSVDGCVAMIKPVDADGDGNVNFEEFR 150
+ +EAF + DQ+++G+I ++L +G + + AMIK + G +NF F
Sbjct: 13 DFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPINFTVFL 68
Query: 151 SMMTTSLK 158
+M LK
Sbjct: 69 TMFGEKLK 76
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGS-SYKEEELVRVMEDLDTDKDGFISLSEF 77
++ ++ F D N+DG I +L +MG + K EEL +++ + G I+ + F
Sbjct: 12 QDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPINFTVF 67
Query: 78 ETIC-RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPV 136
T+ GA E + AF + D D G I L +L + + + M
Sbjct: 68 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAF 127
Query: 137 DADGDGNVNFEEFRSMMT 154
D GNV+++ ++T
Sbjct: 128 PPDVAGNVDYKNICYVIT 145
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 11 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDG 70
R + + RE +F+ FD + G I+L E + G S EE+ + + D D G
Sbjct: 105 RNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSG 164
Query: 71 FISLSE 76
+ + E
Sbjct: 165 ELDVDE 170
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 97 FDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
FD++D+D +G I+ +E GI S + C + D D G ++ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF- 77
E+ K F FD GK+S+ +L +L +G + E+ +++ ++ D +G I +F
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
Query: 78 ETICR 82
E + R
Sbjct: 65 EDVLR 69
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 25 FNQFDANKDGKIS---LTELATVLKSMG-----SSYKEEELV-RVMEDLDTDKDGFISLS 75
F FD + DG ++ L+ L L G S+ + ++L+ ++E+ D D+DG I+LS
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 76 EFETICRTSSGAAG 89
EF+ + S A
Sbjct: 164 EFQHVISRSPDFAS 177
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 84 SSGAAGEAELREAFDLYDQDKNGLISAEELNLVLN---------RLG---IKCSVDGCVA 131
S A + + AF ++D D +G ++ E+L+ ++N RL +K +D
Sbjct: 91 SDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN--- 147
Query: 132 MIKPVDADGDGNVNFEEFRSMMTTS 156
+++ D D DG +N EF+ +++ S
Sbjct: 148 ILEESDIDRDGTINLSEFQHVISRS 172
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 25 FNQFDANKDGKIS---LTELATVLKSMG-----SSYKEEELV-RVMEDLDTDKDGFISLS 75
F FD + DG ++ L+ L L G S+ + ++L+ ++E+ D D+DG I+LS
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 76 EFETICRTSSGAAG 89
EF+ + S A
Sbjct: 195 EFQHVISRSPDFAS 208
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 84 SSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRL-----GIKCSVDGCVAMIKPV-- 136
S A + + AF ++D D +G ++ E+L+ ++N L + S +I +
Sbjct: 122 SDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILE 181
Query: 137 --DADGDGNVNFEEFRSMMTTS 156
D D DG +N EF+ +++ S
Sbjct: 182 ESDIDRDGTINLSEFQHVISRS 203
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 93 LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
L+ + L D D +G ++ EE+ + GI + + DA+GDG + EEF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEF 59
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
++ ++ D + DGK++ E+ + K G E++++ D + DG+I+L EF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA----DANGDGYITLEEF 59
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 69 DGFISLSEFE-TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVD 127
DG I+ EF+ + +T+ + A+ FDL+D NG++ EE L+ +D
Sbjct: 33 DGLINKEEFQLALFKTNKKESLFAD--RVFDLFDTKHNGILGFEEFARALSVFHPNAPID 90
Query: 128 GCVAM-IKPVDADGDGNVNFEEFRSMMTTSL 157
+ + D G + +E + M+ +L
Sbjct: 91 DKIHFSFQLYDLKQQGFIERQEVKQMVVATL 121
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A+K+G + TE ++LK M + L + E+LD
Sbjct: 3 SPEELKGIFEKY-ADKEGDGNQLSKEELKLLLQTEFPSLLKGMST------LDELFEELD 55
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 56 KNGDGEVSFEEFQVLVKKIS 75
Score = 26.2 bits (56), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 132 MIKPVDADGDGNVNFEEFRSMM 153
+ + +D +GDG V+FEEF+ ++
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLV 71
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 56/153 (36%), Gaps = 17/153 (11%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDL-----DTDKD-- 69
S+ ++F QFD N GK+ E VL K +E + D+ D KD
Sbjct: 49 SKSRRIELFKQFDTNGTGKLGFRE---VLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLG 105
Query: 70 ------GFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLG-I 122
G L EF EL FD D+D + L+ +E L +L
Sbjct: 106 NKVKGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEW 165
Query: 123 KCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 155
+ + +D +G G V F+EF T
Sbjct: 166 GVDITDATTVFNEIDTNGSGVVTFDEFSCWAVT 198
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 84 SSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGN 143
S GA+G L F D+D + + A+E L +LG+ + + D +G G
Sbjct: 30 SRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGT 89
Query: 144 VNFEEF 149
++ EEF
Sbjct: 90 LDLEEF 95
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 25 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRV--MEDLDTDKDGFISLSEF 77
F FD G IS EL VL +G +EE+ + + DL D +G + EF
Sbjct: 90 FKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 154
ISA EL +L R+ K S++ C M+ +D DG G + +EF + T
Sbjct: 548 ISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK M + L + E+LD
Sbjct: 2 SPEELKGIFEKY-AAKEGDPNQLSKEELKLLLQTEFPSLLKGMST------LDELFEELD 54
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 55 KNGDGEVSFEEFQVLVKKIS 74
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 132 MIKPVDADGDGNVNFEEFRSMM 153
+ + +D +GDG V+FEEF+ ++
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLV 70
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 154
ISA EL +L R+ K S++ C M+ +D DG G + +EF + T
Sbjct: 548 ISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 28.9 bits (63), Expect = 1.2, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 154
ISA EL +L R+ K S++ C M+ +D DG G + +EF + T
Sbjct: 548 ISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 69 DGFISLSEFE-TICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVD 127
DG I+ EF+ + +T+ + A+ FDL+D NG++ EE L+ +D
Sbjct: 64 DGLINKEEFQLALFKTNKKESLFAD--RVFDLFDTKHNGILGFEEFARALSVFHPNAPID 121
Query: 128 GCVAM-IKPVDADGDGNVNFEEFRSMMTTSL 157
+ + D G + +E + M+ +L
Sbjct: 122 DKIHFSFQLYDLKQQGFIERQEVKQMVVATL 152
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK M + L + E+LD
Sbjct: 6 SPEELKGIFEKY-AAKEGDPNQLSKEELKLLLQTEFPSLLKGMST------LDELFEELD 58
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 59 KNGDGEVSFEEFQVLVKKIS 78
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK M + L + E+LD
Sbjct: 3 SPEELKGIFEKY-AAKEGDPNNLSKEELKLLLQTEFPSLLKGMST------LDELFEELD 55
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 56 KNGDGEVSFEEFQVLVKKIS 75
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 10 NRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKD 69
N+K LI R + +F+ FD + G ISL E T G +E+ + + D D
Sbjct: 109 NKKSLI--RNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNS 166
Query: 70 GFISLSE 76
G + + E
Sbjct: 167 GKLDVDE 173
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 16 VSREEMQKIFNQFDANKDGKISLTELAT-----VLKSMGSS----YKEEELVRVMED--- 63
V+R + +FN D N +GKI+L E+ + + +G++ + +E V
Sbjct: 22 VNRHKF--MFNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIG 79
Query: 64 LDTDK--------DGFISLSEFETICRTSSGAAGEAELREA-FDLYDQDKNGLISAEELN 114
LD K +G+ L++ + + + + EA FD++D+D +G IS +E
Sbjct: 80 LDYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWK 139
Query: 115 LVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEE 148
GI S + K D D G ++ +E
Sbjct: 140 TYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 21 MQKIFNQFDANKDGKISLTELATVLKSMGSSYK--------EEELVRVMEDLDTDKDGFI 72
++ F+ D N DG+++ E+ ++ S+ K +E +ME+LD G+I
Sbjct: 100 LRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYI 159
Query: 73 SLSEFETICRTSSGAAG 89
+ + E + S A
Sbjct: 160 EMEDLEALLLQSPSEAA 176
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 93 LREAFDLYDQDKNGLISAEELNLVL------NRLG-IKCSVDGCVAMI-KPVDADGDGNV 144
LR FD+ D++ +G ++AEE+ ++ N+L IK D A+I + +D G +
Sbjct: 100 LRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYI 159
Query: 145 NFEEFRSMMTTS 156
E+ +++ S
Sbjct: 160 EMEDLEALLLQS 171
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 111 EELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+ELN +L+ G + + D +I+ +DA+ DG ++F+E+ +++
Sbjct: 43 KELNHMLSDTGNRKAAD---KLIQNLDANHDGRISFDEYWTLI 82
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVL 45
+R+ K+ DAN DG+IS E T++
Sbjct: 54 NRKAADKLIQNLDANHDGRISFDEYWTLI 82
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD+D DG E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 74 FMAFVAMITTACHE 87
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 132 MIKPVDADGDGNVNFEEFR---SMMTTS 156
+++ +D+DGDG +F+EF +M+TT+
Sbjct: 57 VMETLDSDGDGECDFQEFMAFVAMITTA 84
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD+D DG E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 74 FMAFVAMITTACHE 87
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 132 MIKPVDADGDGNVNFEEFR---SMMTTS 156
+++ +D+DGDG +F+EF +M+TT+
Sbjct: 57 VMETLDSDGDGECDFQEFMAFVAMITTA 84
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 111 EELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+ELN +L+ G + + D +I+ +DA+ DG ++F+E+ +++
Sbjct: 42 KELNHMLSDTGNRKAAD---KLIQNLDANHDGRISFDEYWTLI 81
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 17 SREEMQKIFNQFDANKDGKISLTELATVL 45
+R+ K+ DAN DG+IS E T++
Sbjct: 53 NRKAADKLIQNLDANHDGRISFDEYWTLI 81
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 24 IFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF 77
+F + D N DG +S E+ + + E+ L + + +D D +G I +EF
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 131 AMIKPVDADGDGNVNFEEFRSMMT 154
A+ K +D +GDG V++EE ++ ++
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVS 27
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 18 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDK--DGFISLS 75
++E KIF+ FD N + +++ +L +G +Y + E +M++ K I
Sbjct: 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE 72
Query: 76 EFETIC 81
E+ T+C
Sbjct: 73 EWLTLC 78
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD D DG E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQE 73
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 74 FMAFVAMVTTACHE 87
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To
Sbi4211
Length = 89
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 24 IFNQF-----DANKDGKISLTELAT-VLKSMGSSYKEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ D +K K L EL L KE+E+V +VME LD+D DG E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 74 FMAFVAMITTACHE 87
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 132 MIKPVDADGDGNVNFEEFR---SMMTTS 156
+++ +D+DGDG +F+EF +M+TT+
Sbjct: 57 VMETLDSDGDGECDFQEFMAFVAMITTA 84
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 91
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD+D DG E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 72
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 73 FMAFVAMITTACHE 86
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 132 MIKPVDADGDGNVNFEEFR---SMMTTS 156
+++ +D+DGDG +F+EF +M+TT+
Sbjct: 56 VMETLDSDGDGECDFQEFMAFVAMITTA 83
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD D DG E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQE 72
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 73 FMAFVAMVTTACHE 86
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
Length = 92
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD D DG E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQE 73
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 74 FMAFVAMVTTACHE 87
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD+D DG E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 72
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 73 FMAFVAMITTACHE 86
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 132 MIKPVDADGDGNVNFEEFR---SMMTTS 156
+++ +D+DGDG +F+EF +M+TT+
Sbjct: 56 VMETLDSDGDGECDFQEFMAFVAMITTA 83
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVM 61
EE+ K+F FD N G ++ +++ +L + G + ++E + +
Sbjct: 84 EELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDAL 126
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD D DG E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQE 73
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 74 FMAFVSMVTTACHE 87
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 132 MIKPVDADGDGNVNFEEFR---SMMTTS 156
+++ +D DGDG +F+EF SM+TT+
Sbjct: 57 VMETLDEDGDGECDFQEFMAFVSMVTTA 84
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK M + L + E+LD
Sbjct: 2 SPEELKGIFEKY-AAKEGDPNQLSKEELKLLLQTEFPSLLKGMST------LDELFEELD 54
Query: 66 TDKDGFISLSEFETICRTSS 85
DG +S EF+ + + S
Sbjct: 55 KAGDGEVSFEEFQVLVKKIS 74
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 108 ISAEELNLVLNRLGIK--------CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 153
+SA EL +LN++ + +D +M+ +D+D G + FEEF+ +
Sbjct: 31 VSATELMNILNKVVTRHPDLKTDGFGIDTSRSMVAVMDSDTTGKLGFEEFKYLW 84
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD D DG E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQE 72
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 73 FMAFVSMVTTACHE 86
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 132 MIKPVDADGDGNVNFEEFR---SMMTTS 156
+++ +D DGDG +F+EF SM+TT+
Sbjct: 56 VMETLDEDGDGECDFQEFMAFVSMVTTA 83
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 7 ADSNRKQLIVSRE-EMQKIFNQFDANKDGKISLTE-LATVLKSMGS--------SYKEEE 56
+D++ K + S E E + + + D NKD +S E LA K++ + ++ +
Sbjct: 47 SDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNR 106
Query: 57 LVRVMEDLDTDKDGFISLSEFETICR 82
+ + + +D DG + L EF+ C+
Sbjct: 107 IPFLFKGMDVSGDGIVDLEEFQNYCK 132
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 85 SGAAGEAELREAFDLY---DQDKNGLISAEELNLVLNRLGIKCSVDGCVAM---IKPVDA 138
S AEL+ F+ Y + D N L S EEL ++ + + G + + +D
Sbjct: 1 SAQKSPAELKSIFEKYAAKEGDPNQL-SKEELKQLI-QAEFPSLLKGPRTLDDLFQELDK 58
Query: 139 DGDGNVNFEEFRSMM 153
+GDG V+FEEF+ ++
Sbjct: 59 NGDGEVSFEEFQVLV 73
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 16/130 (12%)
Query: 25 FNQFDANKDGKISLTELATVLKSMGSSYK--EEELVRVMEDLDTDKDGFISLSEFETI-- 80
F + D N +G +S E +G K ++ L R ++ ++D GF SE+ +
Sbjct: 194 FRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGF---SEYVHLGL 250
Query: 81 CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV-AMIKPVDAD 139
C LR + D DK+G +S EE+ VL I S VD D
Sbjct: 251 CLLV--------LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVD 302
Query: 140 GDGNVNFEEF 149
+++++EF
Sbjct: 303 DSKSLSYQEF 312
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 19 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEE 56
EE+ K F+ FD N G ++ + +L + G + E+E
Sbjct: 65 EELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQE 102
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 55 EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLY 100
EEL++ D + GF++ ++ + I T A E E +A + +
Sbjct: 65 EELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNAF 110
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 90 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSV------DGCVAMIKPVDADGDGN 143
+AEL AF D + +G ++A EL + L ++ + +IK D + DG
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 144 VNFEEF 149
++ EEF
Sbjct: 66 ISKEEF 71
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 19 EEMQKIFNQFDANKDG---KISLTELATVLKSMGSSYKEEE-----LVRVMEDLDTDKDG 70
E + IF Q A +DG KIS TE + + +++ + + L R+M+ LD D DG
Sbjct: 13 ESLIAIF-QKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 71
Query: 71 FISLSEF 77
+ EF
Sbjct: 72 QLDFQEF 78
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 132 MIKPVDADGDGNVNFEEFRSMM 153
M+K +D D DG ++F+EF +++
Sbjct: 61 MMKKLDLDSDGQLDFQEFLNLI 82
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK M + L + E+LD
Sbjct: 2 SPEELKGIFEKY-AAKEGDPNQLSKEELKLLLQTEGPSLLKGMST------LDELFEELD 54
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 55 KNGDGEVSFEEFQVLVKKIS 74
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 132 MIKPVDADGDGNVNFEEFRSMM 153
+ + +D +GDG V+FEEF+ ++
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLV 70
>pdb|1O16|A Chain A, Recombinant Sperm Whale Myoglobin H64dV68SD122N MUTANT
(Met)
Length = 154
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 29 DANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF--ETICRT--- 83
D KDG SLT L +LK G + E EL + + T I EF E I
Sbjct: 61 DLKKDGVTSLTALGAILKKKG--HHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHS 118
Query: 84 ----SSGAAGEAELREAFDLYDQD 103
+ GA + + +A +L+ +D
Sbjct: 119 RHPGNFGADAQGAMNKALELFRKD 142
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 87 AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVD 137
AAGE LREA Q NGL + N+++ G + + +AMI+P D
Sbjct: 66 AAGEPRLREAIAQKLQRDNGLCYGAD-NILVTNGGKQSIFNLMLAMIEPGD 115
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 120 LGIKCSVDGCVAMIKPVDADGDGNVNFEEF 149
L ++ D ++K +D +GDG V+F+EF
Sbjct: 45 LDVQKDADAVDKIMKELDENGDGEVDFQEF 74
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK GS+ E + E+LD
Sbjct: 3 SPEELKGIFEKY-AAKEGDPNQLSKEELKLLLQTEFPSLLKG-GSTLDE-----LFEELD 55
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 56 KNGDGEVSFEEFQVLVKKIS 75
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK GS+ E + E+LD
Sbjct: 2 SPEELKGIFEKY-AAKEGDPNQLSKEELKLLLQTEFPSLLKG-GSTLDE-----LFEELD 54
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 55 KNGDGEVSFEEFQVLVKKIS 74
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 132 MIKPVDADGDGNVNFEEFRSMM 153
+ + +D +GDG V+FEEF+ ++
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLV 70
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 28 FDANKDGKISLTELATVL 45
FD NKDG++ L +LA +L
Sbjct: 157 FDKNKDGRLDLNDLARIL 174
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 21/122 (17%)
Query: 23 KIFNQFDANKDGKISLTELATVLKSMGSSYKEEELV---RVME-------DLDTDKDGFI 72
+I+ FDA+ +G I EL + + ++ + RV + D DG +
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRL 74
Query: 73 SLSE-----------FETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLG 121
+ E F I R + E + + YD D +G ISA EL L L
Sbjct: 75 QIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLF 134
Query: 122 IK 123
++
Sbjct: 135 LQ 136
>pdb|2JNK|A Chain A, Solution Sructure Of A Dockerin-Containing Modular Pair
From A Family 84 Glycoside Hydrolase
pdb|2OZN|B Chain B, The Cohesin-Dockerin Complex Of Nagj And Nagh From
Clostridium Perfringens
Length = 140
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 10/50 (20%)
Query: 29 DANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFE 78
D N +GKI + +LA V K++GS+ LD +KDG S+ E+E
Sbjct: 83 DFNGNGKIDIGDLAMVSKNIGSTTN--------TSLDLNKDG--SIDEYE 122
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 24 IFNQFDANKDGKISL--TELATVLKSMGSSY----KEEELV-RVMEDLDTDKDGFISLSE 76
+F+Q+ + K L +EL ++ + S + KE+E+V +VME LD++ DG E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQE 73
Query: 77 FETICRTSSGAAGE 90
F + A E
Sbjct: 74 FMAFVAMITTACHE 87
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 126 VDGCVAMIKPVDADGDGNVNFEEF 149
VD ++K +D +GDG V+F+E+
Sbjct: 51 VDAVDKVMKELDENGDGEVDFQEY 74
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 126 VDGCVAMIKPVDADGDGNVNFEEF 149
VD ++K +D +GDG V+F+E+
Sbjct: 51 VDAVDKVMKELDENGDGEVDFQEY 74
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 10 NRKQLIVSREEMQKIF---NQFDANK--DGKISLTELATVLKSMGSS----YKEEELVR- 59
N+ + +S +E+Q + + +D N DG T + V K GS E+EL+
Sbjct: 39 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI 98
Query: 60 ---VMEDLDTDKDGFISLSEF 77
V+ D D + DG+I +EF
Sbjct: 99 IDGVLRDDDKNNDGYIDYAEF 119
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 127 DGCVAMIKPVDADGDGNVNFEEF 149
D ++K +D DGDG V+F+E+
Sbjct: 52 DAVDKVMKELDEDGDGEVDFQEY 74
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK + L + E+LD
Sbjct: 2 SPEELKGIFEKY-AAKEGDPNQLSKEELKLLLQTEFPSLLKGPST------LDELFEELD 54
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 55 KNGDGEVSFEEFQVLVKKIS 74
Score = 26.2 bits (56), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 132 MIKPVDADGDGNVNFEEFRSMM 153
+ + +D +GDG V+FEEF+ ++
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLV 70
>pdb|2AQM|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM BRUCELLA ABORTUS
Length = 154
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 27 QFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDK 68
+ AN DGK+S T +A LK + + +V V D +DK
Sbjct: 96 RLSANADGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDK 137
>pdb|1E8A|A Chain A, The Three-Dimensional Structure Of Human S100a12
pdb|1E8A|B Chain B, The Three-Dimensional Structure Of Human S100a12
pdb|1GQM|A Chain A, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|B Chain B, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|C Chain C, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|D Chain D, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|E Chain E, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|F Chain F, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|G Chain G, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|H Chain H, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|I Chain I, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|J Chain J, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|K Chain K, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|L Chain L, The Structure Of S100a12 In A Hexameric Form
Length = 91
Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 132 MIKPVDADGDGNVNFEEFRSMMTTSLKPGP 161
+ + +DA+ D V+F+EF S++ +LK
Sbjct: 56 IFQGLDANQDEQVDFQEFISLVAIALKAAH 85
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 26.6 bits (57), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 18/80 (22%)
Query: 17 SREEMQKIFNQFDANKDG-----------KISLTELATVLKSMGSSYKEEELVRVMEDLD 65
S EE++ IF ++ A K+G + TE ++LK + L + E+LD
Sbjct: 3 SPEELKGIFEKY-AAKEGDPNQLSKEELKLLLQTEFPSLLKGPST------LDELFEELD 55
Query: 66 TDKDGFISLSEFETICRTSS 85
+ DG +S EF+ + + S
Sbjct: 56 KNGDGEVSFEEFQVLVKKIS 75
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 126 VDGCVAMIKPVDADGDGNVNFEEF 149
VD ++K +D +GDG V+F+E+
Sbjct: 51 VDAVDKVMKELDENGDGEVDFQEY 74
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 126 VDGCVAMIKPVDADGDGNVNFEEF 149
VD ++K +D +GDG V+F+E+
Sbjct: 52 VDAVDKVMKELDENGDGEVDFQEY 75
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 126 VDGCVAMIKPVDADGDGNVNFEEF 149
VD ++K +D +GDG V+F+E+
Sbjct: 51 VDAVDKVMKELDENGDGEVDFQEY 74
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 10 NRKQLIVSREEMQKIF---NQFDANK--DGKISLTELATVLKSMGSS----YKEEELVR- 59
N+ + +S +E+Q + + +D N DG T + V K GS E+EL+
Sbjct: 58 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI 117
Query: 60 ---VMEDLDTDKDGFISLSEF 77
V+ D D + DG+I +EF
Sbjct: 118 IDGVLRDDDKNNDGYIDYAEF 138
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 10 NRKQLIVSREEMQKIF---NQFDANK--DGKISLTELATVLKSMGSS----YKEEELVR- 59
N+ + +S +E+Q + + +D N DG T + V K GS E+EL+
Sbjct: 8 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI 67
Query: 60 ---VMEDLDTDKDGFISLSEF 77
V+ D D + DG+I +EF
Sbjct: 68 IDGVLRDDDKNNDGYIDYAEF 88
>pdb|1ODB|A Chain A, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|2WC8|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCF|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCF|B Chain B, Calcium-Free (Apo) S100a12
pdb|2WCF|C Chain C, Calcium-Free (Apo) S100a12
pdb|2WCF|D Chain D, Calcium-Free (Apo) S100a12
pdb|2WCF|E Chain E, Calcium-Free (Apo) S100a12
pdb|2WCF|F Chain F, Calcium-Free (Apo) S100a12
Length = 95
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 132 MIKPVDADGDGNVNFEEFRSMMTTSLKPGP 161
+ + +DA+ D V+F+EF S++ +LK
Sbjct: 60 IFQGLDANQDEQVDFQEFISLVAIALKAAH 89
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.130 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,522,087
Number of Sequences: 62578
Number of extensions: 175126
Number of successful extensions: 2031
Number of sequences better than 100.0: 380
Number of HSP's better than 100.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 471
Number of HSP's gapped (non-prelim): 1011
length of query: 163
length of database: 14,973,337
effective HSP length: 91
effective length of query: 72
effective length of database: 9,278,739
effective search space: 668069208
effective search space used: 668069208
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.7 bits)