BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031229
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q641M3|TMM18_DANRE Transmembrane protein 18 OS=Danio rerio GN=tmem18 PE=2 SV=1
Length = 152
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 69/125 (55%)
Query: 39 GFFHAIDWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGS 98
F ++DW EPWLM L+AFH + S K Q+ FLL +A VY AE LN +
Sbjct: 27 TFLQSVDWSEPWLMALLAFHVFCFAFTLLSCKYYRIQICHFLLMVAMVYSAEYLNELAAM 86
Query: 99 NWKRFATQNYFDSHGIFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARIS 158
NW+ F+ YFDS G+F+S ++S PLL +II+ ++ S + K +L+ +A
Sbjct: 87 NWRSFSKFQYFDSKGMFISLVYSVPLLLNTVIIVAVWVWRTFSTMTELKILQLKRKAARE 146
Query: 159 RNKED 163
+K+
Sbjct: 147 NHKKT 151
>sp|Q28GF5|TMM18_XENTR Transmembrane protein 18 OS=Xenopus tropicalis GN=tmem18 PE=2 SV=1
Length = 136
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 43 AIDWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKR 102
IDWKEPWL+GL FH + L+V S K+ Q+ FLL + V AE +N +W+
Sbjct: 15 PIDWKEPWLIGLAVFHILCLIVTYVSFKSYPLQICHFLLMVVLVSCAEYINEFAAMHWRS 74
Query: 103 FATQNYFDSHGIFLSALWSGPLLFIAIIILVNTLF-SLCSL 142
++ Q YFDS G+F+S +S PLL III+V+ ++ +LC +
Sbjct: 75 YSKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTLCVM 115
>sp|Q5F410|TMM18_CHICK Transmembrane protein 18 OS=Gallus gallus GN=TMEM18 PE=2 SV=1
Length = 142
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 67/117 (57%)
Query: 45 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFA 104
DW EPWL+GL FH + ++ S ++ Q+ FL + VY AE +N + NW+ F+
Sbjct: 26 DWAEPWLLGLAGFHVLCFLLTCFSFQHYRVQIGHFLCMVCLVYCAEYINELAAMNWRLFS 85
Query: 105 TQNYFDSHGIFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARISRNK 161
YFDS G+F+S ++S PLL III+VN ++ +++ K + R +A + K
Sbjct: 86 KYQYFDSRGMFISLVFSAPLLVNTIIIVVNWVYRTLNVMTELKTLQQRIKAEKDKKK 142
>sp|Q3SZ36|TMM18_BOVIN Transmembrane protein 18 OS=Bos taurus GN=TMEM18 PE=2 SV=1
Length = 139
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 45 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFA 104
DW EPWL+GL FH + L++ S + Q+ FL + VY AE +N V NW+ F+
Sbjct: 22 DWTEPWLVGLAGFHVLCLLLTCFSSQRYRLQVGHFLCLVTLVYCAEYINEVAAMNWRLFS 81
Query: 105 TQNYFDSHGIFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAELRHRARI-SRNKED 163
YFDS G+F+S ++S PLL A++I+V L+ +L+V LR + R +R KE+
Sbjct: 82 KHQYFDSRGMFISLVFSAPLLLNALVIVV--LWVRKTLVVMTDLRSLREQRRARARPKEE 139
>sp|Q4V7N7|TMM18_XENLA Transmembrane protein 18 OS=Xenopus laevis GN=tmem18 PE=2 SV=1
Length = 136
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 44 IDWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRF 103
IDW EPWL+GL AFH + +V S K+ Q+ FLL + V AE +N +W+ +
Sbjct: 16 IDWTEPWLIGLAAFHILCFIVTYISFKSYPLQICHFLLMVVLVSCAEYINEFAAMHWRAY 75
Query: 104 ATQNYFDSHGIFLSALWSGPLLFIAIIILVNTLF-SLCSL 142
+ Q YFDS G+F+S +S PLL III+V+ ++ +LC +
Sbjct: 76 SKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTLCVM 115
>sp|Q96B42|TMM18_HUMAN Transmembrane protein 18 OS=Homo sapiens GN=TMEM18 PE=1 SV=2
Length = 140
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%)
Query: 45 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFA 104
DW EPWLMGL FH + +++ S ++ Q+ FL + VY AE +N NW+ F+
Sbjct: 22 DWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFS 81
Query: 105 TQNYFDSHGIFLSALWSGPLLFIAIIILVNTLFSLCSLIVRWKKAE 150
YFDS G+F+S ++S PLL A+II+V ++ +++ K A+
Sbjct: 82 KYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQ 127
>sp|Q6DGF8|TMM18_RAT Transmembrane protein 18 OS=Rattus norvegicus GN=Tmem18 PE=2 SV=1
Length = 140
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%)
Query: 45 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFA 104
DW EPWL+GL+AFH + L++ S + Q+ FL + VY AE +N V NW+ FA
Sbjct: 22 DWTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFA 81
Query: 105 TQNYFDSHGIFLSALWSGPLLFIAIIILV 133
YFDS G+F+S ++S PLLF A++I++
Sbjct: 82 KYQYFDSRGMFISLVFSAPLLFNAMVIVI 110
>sp|Q3TUD9|TMM18_MOUSE Transmembrane protein 18 OS=Mus musculus GN=Tmem18 PE=2 SV=1
Length = 140
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%)
Query: 45 DWKEPWLMGLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFA 104
DW EPWL+GL+AFH + L++ S + Q+ FL + VY AE +N V NW+ F+
Sbjct: 22 DWTEPWLLGLLAFHLLCLLLTCFSSQRYKLQIGHFLCLVVLVYSAEYINEVAAVNWRLFS 81
Query: 105 TQNYFDSHGIFLSALWSGPLLFIAIIILV 133
YFDS G+F+S ++S PLLF A++I++
Sbjct: 82 KYQYFDSRGMFISLVFSAPLLFNAMLIVI 110
>sp|Q9Z1S9|ACTHR_CAVPO Adrenocorticotropic hormone receptor OS=Cavia porcellus GN=MC2R
PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 60 VLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDSHGIF 115
+++++A+ KNL F MY F+ +LA +L ++L S F YF HG F
Sbjct: 43 LIIILAVIKNKNLQFPMYFFICSLAISDMLGSLYKILESILIMFRNMGYFKPHGSF 98
>sp|A0M530|MRAY_GRAFK Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Gramella
forsetii (strain KT0803) GN=mraY PE=3 SV=1
Length = 410
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 53 GLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDSH 112
G + ++ V+AI++RK L + L G++ ENL+ V+ W +F Y +
Sbjct: 313 GSLTIGGIIAVLAIATRKEL------LIPVLCGIFLIENLSVVMQVGWFKFTRMKYGEGR 366
Query: 113 GIFL 116
IFL
Sbjct: 367 RIFL 370
>sp|Q11RH2|MRAY_CYTH3 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=mraY
PE=3 SV=1
Length = 403
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 53 GLMAFHFVLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYFDSH 112
G +A V+ V+A++ RK L L AL G++ ENL+ ++ ++ ++ + Y +
Sbjct: 306 GSLALGGVIAVMALAVRKEL------LLPALCGIFLIENLSVIMQVSYFKYTKKKYGEGR 359
Query: 113 GIF 115
IF
Sbjct: 360 RIF 362
>sp|A3KNK1|T120A_DANRE Transmembrane protein 120A OS=Danio rerio GN=tmem120a PE=2 SV=1
Length = 341
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 65 AISSRKNLNFQMYLFLLALAGVYFA---ENLNRVLGSNWKRFATQNYFDSHGIFLSAL-- 119
+I R N+ F+M FL G+Y + N+N L + +FA ++ ++ ++L+ L
Sbjct: 85 SIKERPNVFFEMEAFLPKKNGLYLSLVLGNVNVTLLNKQSKFAYKDEYEKFKLYLTVLLL 144
Query: 120 -WSGPLLFIAIIILVNTLFSL------CSLIVR 145
+S F+ +V+ LF+ C+L +R
Sbjct: 145 FFSFTCRFLVSYRVVDALFNFLLVWYYCTLTIR 177
>sp|Q84YJ9|HAK26_ORYSJ Potassium transporter 26 OS=Oryza sativa subsp. japonica GN=HAK26
PE=2 SV=1
Length = 739
Score = 29.6 bits (65), Expect = 7.8, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 60 VLLVVAISSRKNLNFQMYLFLLALAGVYFAENLNRVLGSNWKRFATQNYF 109
V++++ S L ++F ++ G+Y +N++L W FA +F
Sbjct: 485 VVMLIIWESNIALASLFFVFFFSIEGIYMTSLMNKILQGGWVPFAITAFF 534
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.140 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,014,474
Number of Sequences: 539616
Number of extensions: 1880113
Number of successful extensions: 6638
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6617
Number of HSP's gapped (non-prelim): 32
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)