Query 031230
Match_columns 163
No_of_seqs 135 out of 1246
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 11:08:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031230.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031230hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2451 Aldehyde dehydrogenase 100.0 3.9E-31 8.5E-36 208.6 13.2 146 10-163 24-169 (503)
2 PLN02467 betaine aldehyde dehy 100.0 9.7E-30 2.1E-34 213.4 20.0 161 3-163 1-161 (503)
3 PLN02419 methylmalonate-semial 100.0 1.6E-29 3.5E-34 214.5 19.1 147 9-163 113-259 (604)
4 KOG2450 Aldehyde dehydrogenase 100.0 4.4E-30 9.5E-35 209.0 13.6 146 11-163 22-168 (501)
5 PRK11241 gabD succinate-semial 100.0 1.3E-28 2.8E-33 205.6 19.1 150 6-163 7-156 (482)
6 PLN02315 aldehyde dehydrogenas 100.0 2.6E-28 5.7E-33 204.8 18.6 148 6-163 17-164 (508)
7 PLN02278 succinic semialdehyde 100.0 5.1E-28 1.1E-32 202.9 19.2 147 9-163 24-170 (498)
8 PRK13252 betaine aldehyde dehy 100.0 7.2E-28 1.6E-32 201.6 18.6 149 6-163 3-152 (488)
9 cd07117 ALDH_StaphAldA1 Unchar 100.0 8.1E-28 1.7E-32 200.7 18.7 144 11-163 2-146 (475)
10 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 6.9E-28 1.5E-32 201.3 18.2 145 10-163 1-146 (479)
11 COG1012 PutA NAD-dependent ald 100.0 1.2E-27 2.5E-32 199.1 17.6 142 11-163 2-143 (472)
12 cd07559 ALDH_ACDHII_AcoD-like 100.0 1.6E-27 3.6E-32 199.1 18.5 144 11-163 2-146 (480)
13 cd07142 ALDH_F2BC Arabidosis a 100.0 2.2E-27 4.8E-32 198.1 19.2 149 8-163 2-151 (476)
14 PLN02466 aldehyde dehydrogenas 100.0 2.7E-27 5.8E-32 199.8 19.8 147 10-163 58-205 (538)
15 PLN02766 coniferyl-aldehyde de 100.0 2.3E-27 4.9E-32 199.1 18.9 148 9-163 20-168 (501)
16 cd07140 ALDH_F1L_FTFDH 10-form 100.0 3.7E-27 8E-32 197.1 19.6 151 9-163 5-157 (486)
17 TIGR03374 ABALDH 1-pyrroline d 100.0 2.3E-27 4.9E-32 197.8 18.3 145 10-163 2-147 (472)
18 PRK09847 gamma-glutamyl-gamma- 100.0 3.2E-27 6.9E-32 197.9 18.9 148 9-163 19-167 (494)
19 cd07086 ALDH_F7_AASADH-like NA 100.0 3.1E-27 6.8E-32 197.3 17.9 143 12-163 1-143 (478)
20 TIGR01722 MMSDH methylmalonic 100.0 6.2E-27 1.3E-31 195.5 18.7 145 11-163 2-146 (477)
21 cd07085 ALDH_F6_MMSDH Methylma 100.0 7.4E-27 1.6E-31 195.1 18.5 145 11-163 2-146 (478)
22 cd07143 ALDH_AldA_AN0554 Asper 100.0 1.2E-26 2.6E-31 193.9 19.0 146 10-163 7-154 (481)
23 PLN00412 NADP-dependent glycer 100.0 1.3E-26 2.7E-31 194.4 19.1 151 8-163 14-168 (496)
24 PRK09457 astD succinylglutamic 100.0 1.1E-26 2.4E-31 194.4 18.5 143 11-163 2-144 (487)
25 TIGR03216 OH_muco_semi_DH 2-hy 99.9 1.3E-26 2.7E-31 193.8 18.7 145 11-163 2-149 (481)
26 cd07113 ALDH_PADH_NahF Escheri 99.9 1.4E-26 3.1E-31 193.4 18.9 148 11-163 1-152 (477)
27 cd07097 ALDH_KGSADH-YcbD Bacil 99.9 1.2E-26 2.5E-31 193.7 18.2 144 10-163 1-145 (473)
28 cd07130 ALDH_F7_AASADH NAD+-de 99.9 1.5E-26 3.2E-31 193.1 18.3 141 13-163 2-142 (474)
29 PRK13473 gamma-aminobutyraldeh 99.9 1.8E-26 4E-31 192.6 18.5 146 9-163 2-148 (475)
30 TIGR03240 arg_catab_astD succi 99.9 2E-26 4.4E-31 192.7 18.6 142 12-163 1-142 (484)
31 cd07124 ALDH_PutA-P5CDH-RocA D 99.9 1.9E-26 4.1E-31 194.1 18.5 144 9-163 32-176 (512)
32 TIGR01237 D1pyr5carbox2 delta- 99.9 2E-26 4.3E-31 193.9 18.5 146 8-163 31-177 (511)
33 cd07128 ALDH_MaoC-N N-terminal 99.9 1.8E-26 4E-31 193.8 18.1 145 11-163 2-154 (513)
34 PRK03137 1-pyrroline-5-carboxy 99.9 2.3E-26 5E-31 193.6 18.6 146 8-163 35-181 (514)
35 TIGR02299 HpaE 5-carboxymethyl 99.9 2E-26 4.4E-31 192.9 18.1 144 11-163 2-145 (488)
36 cd07119 ALDH_BADH-GbsA Bacillu 99.9 2.5E-26 5.4E-31 192.1 18.3 144 13-163 1-144 (482)
37 TIGR01804 BADH glycine betaine 99.9 2.3E-26 5E-31 191.6 17.9 142 13-163 1-143 (467)
38 cd07139 ALDH_AldA-Rv0768 Mycob 99.9 3.3E-26 7.1E-31 190.9 18.9 146 12-163 1-147 (471)
39 cd07088 ALDH_LactADH-AldA Esch 99.9 2.7E-26 5.9E-31 191.2 17.7 143 13-163 1-143 (468)
40 cd07138 ALDH_CddD_SSP0762 Rhod 99.9 3.2E-26 6.9E-31 190.8 17.7 139 12-163 1-140 (466)
41 cd07126 ALDH_F12_P5CDH Delta(1 99.9 3.8E-26 8.3E-31 190.7 18.1 144 12-163 1-152 (489)
42 cd07082 ALDH_F11_NP-GAPDH NADP 99.9 4.3E-26 9.3E-31 190.3 18.4 147 10-163 2-151 (473)
43 cd07131 ALDH_AldH-CAJ73105 Unc 99.9 4.3E-26 9.3E-31 190.5 17.9 144 12-163 1-145 (478)
44 cd07141 ALDH_F1AB_F2_RALDH1 NA 99.9 7.4E-26 1.6E-30 189.2 19.1 150 8-163 5-155 (481)
45 cd07144 ALDH_ALD2-YMR170C Sacc 99.9 7.6E-26 1.6E-30 189.3 18.9 146 9-163 7-154 (484)
46 cd07091 ALDH_F1-2_Ald2-like AL 99.9 9.4E-26 2E-30 188.4 19.4 145 10-163 4-151 (476)
47 TIGR01236 D1pyr5carbox1 delta- 99.9 8E-26 1.7E-30 190.8 18.1 146 9-163 31-180 (533)
48 PRK11903 aldehyde dehydrogenas 99.9 7.8E-26 1.7E-30 190.3 17.5 147 10-163 5-158 (521)
49 cd07083 ALDH_P5CDH ALDH subfam 99.9 1.3E-25 2.8E-30 188.5 18.4 147 8-163 17-164 (500)
50 TIGR02278 PaaN-DH phenylacetic 99.9 1.1E-25 2.3E-30 193.9 18.0 142 11-163 2-154 (663)
51 TIGR01238 D1pyr5carbox3 delta- 99.9 7.3E-26 1.6E-30 189.8 16.4 134 8-163 36-170 (500)
52 cd07151 ALDH_HBenzADH NADP+-de 99.9 1.9E-25 4E-30 186.1 17.2 140 16-163 1-140 (465)
53 cd07123 ALDH_F4-17_P5CDH Delta 99.9 3.6E-25 7.8E-30 186.6 18.3 145 9-163 32-180 (522)
54 cd07125 ALDH_PutA-P5CDH Delta( 99.9 3.2E-25 6.9E-30 186.8 18.0 144 10-163 33-177 (518)
55 cd07111 ALDH_F16 Aldehyde dehy 99.9 3.8E-25 8.2E-30 184.8 17.2 137 8-163 20-157 (480)
56 PRK13968 putative succinate se 99.9 3.8E-25 8.3E-30 184.1 17.2 131 24-163 6-136 (462)
57 PRK09407 gabD2 succinic semial 99.9 4.9E-25 1.1E-29 185.9 17.0 146 10-163 19-164 (524)
58 PRK11563 bifunctional aldehyde 99.9 1.1E-24 2.4E-29 188.3 17.6 143 10-163 5-158 (675)
59 PRK09406 gabD1 succinic semial 99.9 1.3E-24 2.8E-29 180.7 16.6 131 27-163 3-133 (457)
60 PF00171 Aldedh: Aldehyde dehy 99.9 9.6E-25 2.1E-29 181.7 15.1 136 18-163 1-136 (462)
61 TIGR03250 PhnAcAld_DH putative 99.9 1.1E-23 2.4E-28 175.8 18.8 143 10-163 4-149 (472)
62 KOG2452 Formyltetrahydrofolate 99.9 1.5E-25 3.3E-30 181.4 7.3 149 11-163 423-573 (881)
63 cd07150 ALDH_VaniDH_like Pseud 99.9 4.1E-24 9E-29 177.4 15.9 129 27-163 1-129 (451)
64 cd07120 ALDH_PsfA-ACA09737 Pse 99.9 8.6E-24 1.9E-28 175.7 16.8 127 29-163 1-127 (455)
65 cd07145 ALDH_LactADH_F420-Bios 99.9 8.1E-24 1.8E-28 175.9 15.8 131 27-163 1-133 (456)
66 cd07110 ALDH_F10_BADH Arabidop 99.9 1.1E-23 2.5E-28 175.0 16.3 130 29-163 1-130 (456)
67 cd07118 ALDH_SNDH Gluconobacte 99.9 2.2E-23 4.7E-28 173.3 16.6 128 30-163 2-129 (454)
68 cd07112 ALDH_GABALDH-PuuC Esch 99.9 2.9E-23 6.3E-28 172.8 17.3 132 25-163 2-134 (462)
69 cd07101 ALDH_SSADH2_GabD2 Myco 99.9 2.4E-23 5.1E-28 173.1 16.1 128 30-163 1-128 (454)
70 PRK11904 bifunctional proline 99.9 3.7E-23 8E-28 184.7 18.0 140 11-163 554-694 (1038)
71 cd07148 ALDH_RL0313 Uncharacte 99.9 3.8E-23 8.2E-28 171.9 16.8 130 28-163 2-134 (455)
72 cd07089 ALDH_CddD-AldA-like Rh 99.9 3.8E-23 8.3E-28 172.0 16.8 130 29-163 1-133 (459)
73 cd07090 ALDH_F9_TMBADH NAD+-de 99.9 2.9E-23 6.3E-28 172.6 15.8 126 29-163 1-126 (457)
74 TIGR01780 SSADH succinate-semi 99.9 3.5E-23 7.6E-28 171.8 16.0 127 29-163 1-127 (448)
75 cd07107 ALDH_PhdK-like Nocardi 99.9 3.4E-23 7.4E-28 172.2 15.9 126 29-163 1-126 (456)
76 cd07147 ALDH_F21_RNP123 Aldehy 99.9 3.7E-23 8E-28 171.8 16.1 132 27-163 1-133 (452)
77 cd07109 ALDH_AAS00426 Uncharac 99.9 4.4E-23 9.5E-28 171.4 16.0 126 29-163 1-127 (454)
78 cd07094 ALDH_F21_LactADH-like 99.9 4.9E-23 1.1E-27 171.1 16.1 131 27-163 1-133 (453)
79 cd07099 ALDH_DDALDH Methylomon 99.9 1.4E-22 2.9E-27 168.4 16.5 129 30-163 1-129 (453)
80 cd07108 ALDH_MGR_2402 Magnetos 99.9 1E-22 2.2E-27 169.4 15.7 126 29-163 1-127 (457)
81 cd07102 ALDH_EDX86601 Uncharac 99.9 1.7E-22 3.7E-27 167.8 16.2 126 30-163 1-126 (452)
82 cd07114 ALDH_DhaS Uncharacteri 99.9 2.2E-22 4.8E-27 167.3 16.6 129 29-163 1-129 (457)
83 cd07103 ALDH_F5_SSADH_GabD Mit 99.9 2.6E-22 5.7E-27 166.6 16.2 127 29-163 1-127 (451)
84 cd07115 ALDH_HMSADH_HapE Pseud 99.9 2.2E-22 4.8E-27 167.2 15.5 125 30-163 2-127 (453)
85 cd07149 ALDH_y4uC Uncharacteri 99.9 3.1E-22 6.7E-27 166.2 15.8 131 27-163 1-133 (453)
86 cd07092 ALDH_ABALDH-YdcW Esche 99.9 3.9E-22 8.4E-27 165.6 15.9 127 29-163 1-128 (450)
87 cd07098 ALDH_F15-22 Aldehyde d 99.9 5.2E-22 1.1E-26 165.4 16.6 129 30-163 1-130 (465)
88 cd07106 ALDH_AldA-AAD23400 Str 99.9 4.8E-22 1E-26 164.9 15.7 124 29-163 1-124 (446)
89 PRK11809 putA trifunctional tr 99.9 5.4E-22 1.2E-26 179.4 15.9 121 23-163 657-778 (1318)
90 cd07146 ALDH_PhpJ Streptomyces 99.9 1.3E-21 2.9E-26 162.5 15.4 127 28-163 2-130 (451)
91 cd07093 ALDH_F8_HMSADH Human a 99.9 1.7E-21 3.6E-26 162.0 15.7 126 29-163 1-127 (455)
92 PRK11905 bifunctional proline 99.9 3.2E-21 6.8E-26 174.2 15.8 129 12-163 557-686 (1208)
93 cd07152 ALDH_BenzADH NAD-depen 99.9 9.5E-21 2.1E-25 157.0 15.4 120 35-163 1-120 (443)
94 PLN02174 aldehyde dehydrogenas 99.9 8.8E-21 1.9E-25 158.3 14.9 115 44-163 7-122 (484)
95 COG4230 Delta 1-pyrroline-5-ca 99.9 1E-20 2.2E-25 155.6 12.7 129 13-163 117-246 (769)
96 PLN02203 aldehyde dehydrogenas 99.8 5E-20 1.1E-24 154.0 15.4 116 43-163 2-118 (484)
97 PTZ00381 aldehyde dehydrogenas 99.8 5.8E-20 1.3E-24 154.0 15.4 116 43-163 3-119 (493)
98 TIGR02288 PaaN_2 phenylacetic 99.8 1.2E-19 2.7E-24 153.2 14.8 128 28-163 68-203 (551)
99 cd07135 ALDH_F14-YMR110C Sacch 99.8 1.7E-19 3.7E-24 149.3 15.1 115 44-163 2-118 (436)
100 cd07127 ALDH_PAD-PaaZ Phenylac 99.8 1.6E-19 3.6E-24 152.6 15.1 135 21-163 61-203 (549)
101 cd07095 ALDH_SGSD_AstD N-succi 99.8 2.2E-19 4.7E-24 148.5 13.2 107 48-163 1-107 (431)
102 cd07136 ALDH_YwdH-P39616 Bacil 99.8 6.6E-19 1.4E-23 146.2 13.7 108 51-163 2-110 (449)
103 cd07105 ALDH_SaliADH Salicylal 99.8 8.8E-19 1.9E-23 144.9 13.1 108 48-163 1-108 (432)
104 KOG2454 Betaine aldehyde dehyd 99.8 3.6E-19 7.8E-24 141.4 10.2 136 23-163 62-198 (583)
105 cd07100 ALDH_SSADH1_GabD1 Myco 99.8 7.3E-19 1.6E-23 145.3 12.6 106 49-163 1-106 (429)
106 cd07137 ALDH_F3FHI Plant aldeh 99.8 2.7E-18 5.9E-23 142.0 14.2 109 50-163 2-111 (432)
107 cd07132 ALDH_F3AB Aldehyde deh 99.8 3.4E-18 7.5E-23 141.8 14.0 108 51-163 2-110 (443)
108 cd07104 ALDH_BenzADH-like ALDH 99.8 2.7E-18 5.9E-23 141.8 13.1 108 48-163 1-108 (431)
109 cd07087 ALDH_F3-13-14_CALDH-li 99.8 8.8E-18 1.9E-22 138.8 14.1 108 51-163 2-110 (426)
110 cd07134 ALDH_AlkH-like Pseudom 99.8 1.4E-17 3.1E-22 137.8 14.1 108 51-163 2-110 (433)
111 cd07133 ALDH_CALDH_CalB Conife 99.7 2.3E-17 5E-22 136.6 13.6 108 51-163 2-111 (434)
112 cd07122 ALDH_F20_ACDH Coenzyme 99.7 3.3E-17 7.1E-22 135.5 10.9 103 49-163 1-105 (436)
113 cd07081 ALDH_F20_ACDH_EutE-lik 99.7 4.5E-17 9.7E-22 134.9 11.7 103 49-163 1-105 (439)
114 cd07084 ALDH_KGSADH-like ALDH 99.7 5.1E-17 1.1E-21 134.8 11.2 107 50-163 2-110 (442)
115 cd07129 ALDH_KGSADH Alpha-Keto 99.7 8.8E-17 1.9E-21 133.8 12.5 110 49-163 1-115 (454)
116 KOG2455 Delta-1-pyrroline-5-ca 99.7 2.7E-16 5.8E-21 126.6 13.3 147 7-163 57-207 (561)
117 PLN02418 delta-1-pyrroline-5-c 99.7 2.9E-16 6.3E-21 136.7 12.7 110 47-163 294-415 (718)
118 cd07121 ALDH_EutE Ethanolamine 99.7 2.5E-16 5.4E-21 130.2 11.5 105 46-163 3-107 (429)
119 KOG2453 Aldehyde dehydrogenase 99.7 1.1E-16 2.4E-21 125.4 8.0 141 13-163 23-163 (507)
120 TIGR00407 proA gamma-glutamyl 99.7 2.1E-16 4.6E-21 129.4 9.2 101 56-163 1-113 (398)
121 PRK15398 aldehyde dehydrogenas 99.7 6.4E-16 1.4E-20 128.9 12.1 108 43-163 32-139 (465)
122 PRK13805 bifunctional acetalde 99.7 7.7E-16 1.7E-20 136.7 12.9 113 40-163 5-118 (862)
123 PRK00197 proA gamma-glutamyl p 99.7 5.6E-16 1.2E-20 127.7 10.8 109 46-163 3-125 (417)
124 TIGR02518 EutH_ACDH acetaldehy 99.6 2.5E-15 5.4E-20 126.0 13.2 110 43-163 4-114 (488)
125 cd07078 ALDH NAD(P)+ dependent 99.6 4.2E-15 9.1E-20 122.8 12.7 106 50-163 1-106 (432)
126 KOG2456 Aldehyde dehydrogenase 99.6 8.9E-15 1.9E-19 117.0 13.4 110 49-163 4-114 (477)
127 cd06534 ALDH-SF NAD(P)+-depend 99.6 8.2E-15 1.8E-19 118.8 12.4 101 55-163 2-102 (367)
128 cd07079 ALDH_F18-19_ProA-GPR G 99.6 5.1E-15 1.1E-19 121.7 9.4 106 51-163 2-119 (406)
129 cd07077 ALDH-like NAD(P)+-depe 99.6 6.9E-15 1.5E-19 120.6 8.9 98 55-163 2-110 (397)
130 TIGR01092 P5CS delta l-pyrroli 99.5 1.4E-13 3.1E-18 120.0 12.3 105 48-163 287-407 (715)
131 PRK10090 aldehyde dehydrogenas 99.5 2.3E-13 5.1E-18 112.0 10.3 81 80-163 1-81 (409)
132 COG0014 ProA Gamma-glutamyl ph 98.1 7E-05 1.5E-09 60.9 10.8 107 47-160 3-121 (417)
133 KOG4165 Gamma-glutamyl phospha 97.5 0.0012 2.7E-08 52.6 9.4 103 49-160 2-118 (433)
134 cd07080 ALDH_Acyl-CoA-Red_LuxC 97.4 0.00032 7E-09 58.3 6.1 93 50-163 27-122 (422)
135 PF13376 OmdA: Bacteriocin-pro 68.4 13 0.00028 22.2 4.0 36 46-86 7-42 (63)
136 PF08776 VASP_tetra: VASP tetr 68.1 13 0.00028 20.4 3.4 28 76-103 9-36 (40)
137 cd01390 HMGB-UBF_HMG-box HMGB- 66.6 12 0.00027 21.9 3.7 35 55-94 31-65 (66)
138 cd00591 HU_IHF Integration hos 64.3 23 0.00049 22.2 4.8 39 90-128 1-39 (87)
139 PF06945 DUF1289: Protein of u 61.1 8.1 0.00018 22.2 2.0 21 67-87 29-49 (51)
140 smart00398 HMG high mobility g 57.2 29 0.00063 20.3 4.2 29 67-95 39-67 (70)
141 PRK10753 transcriptional regul 55.3 43 0.00093 21.5 4.9 38 90-127 2-39 (90)
142 PF07942 N2227: N2227-like pro 54.5 35 0.00077 26.9 5.2 46 42-92 4-49 (270)
143 cd01388 SOX-TCF_HMG-box SOX-TC 54.3 28 0.0006 21.1 3.8 35 55-94 32-66 (72)
144 smart00411 BHL bacterial (prok 53.3 47 0.001 20.9 4.9 37 90-126 2-38 (90)
145 PF09011 HMG_box_2: HMG-box do 52.8 25 0.00053 21.4 3.4 38 54-96 34-71 (73)
146 TIGR03481 HpnM hopanoid biosyn 51.7 15 0.00032 27.4 2.6 23 67-89 77-99 (198)
147 PF00216 Bac_DNA_binding: Bact 51.7 58 0.0013 20.4 5.2 39 90-128 2-40 (90)
148 PF00505 HMG_box: HMG (high mo 51.5 25 0.00054 20.8 3.2 30 67-96 38-67 (69)
149 TIGR00987 himA integration hos 50.2 55 0.0012 21.1 4.9 39 90-128 3-41 (96)
150 PF05494 Tol_Tol_Ttg2: Toluene 50.1 18 0.00039 26.0 2.8 24 67-90 51-74 (170)
151 cd00084 HMG-box High Mobility 48.3 46 0.001 19.1 4.0 34 55-93 31-64 (66)
152 PF07831 PYNP_C: Pyrimidine nu 48.0 16 0.00034 22.8 1.9 28 34-61 46-73 (75)
153 PRK00285 ihfA integration host 46.9 67 0.0014 20.8 4.9 39 90-128 4-42 (99)
154 PRK15117 ABC transporter perip 46.5 20 0.00044 27.0 2.7 23 67-89 81-103 (211)
155 PRK10664 transcriptional regul 46.3 70 0.0015 20.5 4.9 37 90-126 2-38 (90)
156 PF08006 DUF1700: Protein of u 46.1 40 0.00087 24.5 4.2 42 69-110 15-58 (181)
157 cd07049 BMC_EutL_repeat1 ethan 44.5 59 0.0013 21.8 4.3 31 31-61 68-98 (103)
158 PF06163 DUF977: Bacterial pro 42.7 1E+02 0.0023 21.4 5.4 43 69-111 3-45 (127)
159 TIGR03065 srtB_sig_QVPTGV sort 42.1 16 0.00035 18.5 1.0 12 152-163 2-13 (32)
160 cd01389 MATA_HMG-box MATA_HMG- 41.5 54 0.0012 20.1 3.7 28 67-94 39-66 (77)
161 PF15612 WHIM1: WSTF, HB1, Itc 41.2 57 0.0012 18.2 3.5 21 67-87 13-33 (50)
162 TIGR01201 HU_rel DNA-binding p 38.5 94 0.002 21.9 4.9 38 90-127 32-69 (145)
163 PF14376 Haem_bd: Haem-binding 38.4 1.4E+02 0.0029 20.8 5.9 77 25-104 43-119 (137)
164 COG0776 HimA Bacterial nucleoi 38.3 1.2E+02 0.0025 20.0 5.0 40 90-129 3-42 (94)
165 PF07208 DUF1414: Protein of u 37.1 66 0.0014 18.0 3.1 21 69-89 22-42 (44)
166 COG4709 Predicted membrane pro 36.8 66 0.0014 24.0 3.9 42 68-109 14-57 (195)
167 PF06304 DUF1048: Protein of u 36.1 1.3E+02 0.0029 20.0 7.3 42 70-120 40-82 (103)
168 PF08793 2C_adapt: 2-cysteine 33.7 19 0.00042 19.3 0.6 13 28-40 10-22 (37)
169 PHA02571 a-gt.4 hypothetical p 33.4 1.5E+02 0.0033 20.0 7.0 50 76-125 28-77 (109)
170 KOG0840 ATP-dependent Clp prot 32.2 75 0.0016 25.0 3.7 32 83-114 204-235 (275)
171 PTZ00199 high mobility group p 31.5 1.3E+02 0.0029 19.3 4.5 30 67-96 62-91 (94)
172 PF06518 DUF1104: Protein of u 30.8 1.2E+02 0.0026 19.8 4.1 37 67-103 56-92 (93)
173 PRK11905 bifunctional proline 30.7 50 0.0011 31.7 3.1 21 143-163 1068-1088(1208)
174 PF14216 DUF4326: Domain of un 30.5 1E+02 0.0022 19.8 3.7 16 74-89 34-49 (86)
175 COG1856 Uncharacterized homolo 29.3 78 0.0017 24.6 3.4 35 27-61 185-219 (275)
176 COG5440 Uncharacterized conser 28.8 1.2E+02 0.0026 21.8 4.1 56 22-90 39-94 (161)
177 COG2854 Ttg2D ABC-type transpo 28.7 82 0.0018 23.7 3.4 37 67-106 83-119 (202)
178 PF07278 DUF1441: Protein of u 27.7 2.4E+02 0.0051 20.3 7.1 55 69-124 88-142 (152)
179 TIGR00988 hip integration host 27.1 1.7E+02 0.0037 18.6 5.0 38 90-127 2-40 (94)
180 PF09655 Nitr_red_assoc: Conse 26.9 61 0.0013 23.1 2.3 40 67-106 34-76 (144)
181 smart00564 PQQ beta-propeller 26.3 91 0.002 15.1 2.7 19 23-41 14-32 (33)
182 PF10654 DUF2481: Protein of u 26.3 1.1E+02 0.0024 20.9 3.3 27 68-94 21-47 (126)
183 PF12085 DUF3562: Protein of u 25.5 1.7E+02 0.0037 17.9 4.2 24 88-111 3-26 (66)
184 PF12758 DUF3813: Protein of u 25.0 80 0.0017 19.1 2.2 37 48-89 25-61 (63)
185 COG3313 Predicted Fe-S protein 24.6 95 0.0021 19.5 2.6 20 67-86 34-53 (74)
186 PRK09897 hypothetical protein; 24.0 72 0.0016 27.7 2.7 41 50-94 350-390 (534)
187 PRK00199 ihfB integration host 23.5 2.1E+02 0.0045 18.2 5.0 38 90-127 2-40 (94)
188 PF14098 SSPI: Small, acid-sol 23.4 92 0.002 19.0 2.3 46 37-86 7-64 (65)
189 PF05402 PqqD: Coenzyme PQQ sy 23.1 1.7E+02 0.0037 17.1 4.4 32 90-121 31-62 (68)
190 PF07205 DUF1413: Domain of un 21.4 1.1E+02 0.0025 18.5 2.6 26 67-92 27-52 (70)
191 PRK12552 ATP-dependent Clp pro 21.2 2.1E+02 0.0045 21.9 4.4 36 76-111 154-189 (222)
192 PRK09635 sigI RNA polymerase s 21.2 3E+02 0.0066 21.6 5.6 63 36-103 138-204 (290)
193 KOG1318 Helix loop helix trans 20.3 4.4E+02 0.0096 22.2 6.4 54 76-129 271-325 (411)
194 PF05893 LuxC: Acyl-CoA reduct 20.2 5.1E+02 0.011 21.5 8.2 16 147-162 81-96 (399)
No 1
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=99.97 E-value=3.9e-31 Score=208.57 Aligned_cols=146 Identities=35% Similarity=0.557 Sum_probs=138.8
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
.+.||+|+|+++.++.+|+|.||++|+.++.++..+.++.+.|+++|.+||. .|+.++..+|.++|++..++|.+
T Consensus 24 ~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~-----s~~~~takeRs~lLrkwy~Li~e 98 (503)
T KOG2451|consen 24 AQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK-----SYRNLTAKERSALLRKWYELIME 98 (503)
T ss_pred hhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHh
Confidence 3679999999998889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|+|+|+.++++|.|||+.+|.+||..+..+++||+..+++..++. .+...++...++.++|+|||++|+||
T Consensus 99 n~ddLa~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdi---i~s~~~~rr~i~ikQPvGV~alItPW 169 (503)
T KOG2451|consen 99 NKDDLATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDI---IPSLNPNRRLIVIKQPVGVVALITPW 169 (503)
T ss_pred chHHHHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccc---cCCCCCCceEEEEeccceeEEEecCc
Confidence 999999999999999999999999999999999999999999985 44444677889999999999999999
No 2
>PLN02467 betaine aldehyde dehydrogenase
Probab=99.97 E-value=9.7e-30 Score=213.37 Aligned_cols=161 Identities=83% Similarity=1.347 Sum_probs=139.5
Q ss_pred cccCCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 031230 3 MAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRA 82 (163)
Q Consensus 3 ~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~ 82 (163)
+++|.+.+++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|++.|++||.++++..|+.++..+|.++|.+
T Consensus 1 ~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~ 80 (503)
T PLN02467 1 MAIPVPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRA 80 (503)
T ss_pred CCCccCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHH
Confidence 45778888999999999876678899999999999999999999999999999999992221118999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEcc
Q 031230 83 IAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITP 162 (163)
Q Consensus 83 ~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsP 162 (163)
++++|++++++|+.++++|+|||..++..||..+++.++||+.++.++.+....+...+..+...++.|+|+|||++|+|
T Consensus 81 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 160 (503)
T PLN02467 81 IAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITP 160 (503)
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECC
Confidence 99999999999999999999999999999999999999999999988876531111112124467899999999999999
Q ss_pred C
Q 031230 163 W 163 (163)
Q Consensus 163 w 163 (163)
|
T Consensus 161 w 161 (503)
T PLN02467 161 W 161 (503)
T ss_pred C
Confidence 9
No 3
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=99.97 E-value=1.6e-29 Score=214.51 Aligned_cols=147 Identities=26% Similarity=0.352 Sum_probs=133.5
Q ss_pred CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
.+++||||+|+.+.++..++++||+||+++++++.++.+|++.|++.|++||+ .|+.++..+|+++|.+++++|+
T Consensus 113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~eR~~iL~k~a~~L~ 187 (604)
T PLN02419 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP-----LWRNTPITTRQRVMLKFQELIR 187 (604)
T ss_pred ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHH
Confidence 46889999999876667899999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+++|+.+++.|+|||+.++..||..+++.++||++++..+.+.. .+....+...++.|+|+|||++|+||
T Consensus 188 ~~~~ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~---~~~~~~~~~~~~~reP~GVV~~I~Pw 259 (604)
T PLN02419 188 KNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEY---LPNVSNGVDTYSIREPLGVCAGICPF 259 (604)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCc---ccccCCCccceEEecCccEEEEECCC
Confidence 9999999999999999999999999999999999999998887653 12111344578999999999999999
No 4
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=99.97 E-value=4.4e-30 Score=209.03 Aligned_cols=146 Identities=42% Similarity=0.711 Sum_probs=136.3
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
.+||||+|+++.++++|+++||.||+++++++.++.+||+.|+++|++||+.+ .|++++..+|..+|.+++++++++
T Consensus 22 ~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~---~W~~~~~~~R~~~L~~~Adlie~~ 98 (501)
T KOG2450|consen 22 GLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLV---DWAKRDAAERGRLLRKLADLIEQD 98 (501)
T ss_pred heeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcC---ccccCCHHHHHHHHHHHHHHHHhh
Confidence 78999999999899999999999999999999999999999999999999943 699999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.+.+.+.|||+.++. .||..+++++|||+.+++++.+.. .+. ..++..|++++|+|||+.|+||
T Consensus 99 ~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~---~~~-~~~~~~yt~~eP~GV~G~I~pW 168 (501)
T KOG2450|consen 99 ADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGST---IPT-DGEFFAYTRREPIGVCGQIIPW 168 (501)
T ss_pred hHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhccccc---CCC-CCceEEEecCCcceeeeEeccC
Confidence 99999999999999999998 799999999999999999986652 222 2567899999999999999999
No 5
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=99.96 E-value=1.3e-28 Score=205.61 Aligned_cols=150 Identities=32% Similarity=0.543 Sum_probs=133.6
Q ss_pred CCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230 6 PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA 85 (163)
Q Consensus 6 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~ 85 (163)
++...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+++|+++|+ .|+.+|..+|.++|.++++
T Consensus 7 ~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~-----~W~~~~~~~R~~~L~~~a~ 81 (482)
T PRK11241 7 TLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP-----AWRALTAKERANILRRWFN 81 (482)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHH
Confidence 34445689999999765677899999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 86 KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 86 ~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|++++++|+.+++.|+|||..++..|+..+++.++|++..+.++.+.. .+....+...++.|+|+|||++|+||
T Consensus 82 ~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~Pw 156 (482)
T PRK11241 82 LMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDT---IPGHQADKRLIVIKQPIGVTAAITPW 156 (482)
T ss_pred HHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEeeceEEEEECCC
Confidence 9999999999999999999999999999999999999999988776552 12111244568999999999999999
No 6
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=99.96 E-value=2.6e-28 Score=204.81 Aligned_cols=148 Identities=22% Similarity=0.422 Sum_probs=131.8
Q ss_pred CCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230 6 PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA 85 (163)
Q Consensus 6 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~ 85 (163)
.+...++||||+|+.+ +.+++++||.||+++++++.++.+|+++|+++|++||+ .|++++..+|+++|.++++
T Consensus 17 ~~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~ 89 (508)
T PLN02315 17 SSRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK-----IWMQVPAPKRGEIVRQIGD 89 (508)
T ss_pred CccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHH
Confidence 3445688999999864 57899999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 86 KITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 86 ~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|++|+++|+++++.|+|||..++..||..+++.++|+++.++.+.+.. .+....+...++.|+|+|||++|+||
T Consensus 90 ~l~~~~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw 164 (508)
T PLN02315 90 ALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSI---IPSERPNHMMMEVWNPLGIVGVITAF 164 (508)
T ss_pred HHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEecceEEEEECCC
Confidence 9999999999999999999999998999999999999999888776642 12111244567889999999999999
No 7
>PLN02278 succinic semialdehyde dehydrogenase
Probab=99.96 E-value=5.1e-28 Score=202.89 Aligned_cols=147 Identities=34% Similarity=0.604 Sum_probs=133.5
Q ss_pred CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
+.++||+|+|+.+.++..++++||.||+++++++.++.+|++.|++.|++||+ .|+.+|..+|.++|.+++++|+
T Consensus 24 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~ 98 (498)
T PLN02278 24 RTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP-----SWSKLTASERSKILRRWYDLII 98 (498)
T ss_pred cccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence 46899999998765677899999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+++|+.+++.|+|||..++..||..+++.++|+++.+.++.+.. .+....+...++.|+|+|||++|+||
T Consensus 99 ~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~P~GvV~~I~Pw 170 (498)
T PLN02278 99 ANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDI---IPSPFPDRRLLVLKQPVGVVGAITPW 170 (498)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEeecccEEEEECCC
Confidence 9999999999999999999999999999999999999998876652 22222345678899999999999999
No 8
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=99.96 E-value=7.2e-28 Score=201.60 Aligned_cols=149 Identities=37% Similarity=0.601 Sum_probs=134.2
Q ss_pred CCCCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230 6 PIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA 85 (163)
Q Consensus 6 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~ 85 (163)
..+.+++||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||+ .|+.+|..+|.++|.++++
T Consensus 3 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~ 77 (488)
T PRK13252 3 RQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK-----IWAAMTAMERSRILRRAVD 77 (488)
T ss_pred cCccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHH
Confidence 45667899999999766678899999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 86 KITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 86 ~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|++|+++|+.++++|+|||..++.. |+..+++.+++++++.+.+.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 78 ~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~PlGVv~~I~p~ 152 (488)
T PRK13252 78 ILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQ---IPLR-GGSFVYTRREPLGVCAGIGAW 152 (488)
T ss_pred HHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCce---eccC-CCceEEEEEeeeeEEEEECCC
Confidence 99999999999999999999999975 99999999999999987765542 1222 345678999999999999999
No 9
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=99.96 E-value=8.1e-28 Score=200.69 Aligned_cols=144 Identities=42% Similarity=0.614 Sum_probs=130.4
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
++||+|+|+.+.++..++++||+||+++++++.++.+|+++|++.|+++|. .|+.+|.++|.++|.+++++|++|
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~ 76 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK-----TWRKTTVAERANILNKIADIIDEN 76 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHC
Confidence 579999999876678899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.+++.|+|||..++.. |+..+++.++++++++....+.. .+.. .+...++.|+|+|||++|+||
T Consensus 77 ~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw 146 (475)
T cd07117 77 KELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSA---NMID-EDTLSIVLREPIGVVGQIIPW 146 (475)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceeEEEEeecceEEEECCC
Confidence 999999999999999999975 99999999999999887665542 1112 344578999999999999999
No 10
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=99.96 E-value=6.9e-28 Score=201.32 Aligned_cols=145 Identities=38% Similarity=0.600 Sum_probs=131.0
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
+++||+|+|+.+.++.+++++||.||+++++++.++.+|++.|++.|++||+ .|+.+|..+|.++|.+++++|++
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~ 75 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE-----AWGKTSVAERANILNKIADRMEA 75 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3689999999876678899999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|+++|+.+++.|+|||..++.. |+..+++.++++++.+....+.. .+.. .+...++.|+|+|||++|+||
T Consensus 76 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw 146 (479)
T cd07116 76 NLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI---SEID-ENTVAYHFHEPLGVVGQIIPW 146 (479)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCee---ecCC-CCceEEEEEeccceEEEECCC
Confidence 9999999999999999999975 99999999999999887765542 1112 345678999999999999999
No 11
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=99.96 E-value=1.2e-27 Score=199.14 Aligned_cols=142 Identities=44% Similarity=0.719 Sum_probs=131.9
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
++||+|+|+...+ +++++||+||++++.++.++.+|++.|+++|+.+|. .|++++..+|.++|.+++++|++|
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~-----~W~~~~~~eR~~iL~~~a~~l~~~ 74 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE-----AWSRLSAEERAAILRRIADLLEAR 74 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 6799999998754 899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.+++.|+|||+.++..|+..+++.++||+..++++.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 75 ~~ela~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw 143 (472)
T COG1012 75 AEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGET---IPTD-KGSKALVRREPLGVVGAITPW 143 (472)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---cCCC-CCcceEEEeecceEEEEECCC
Confidence 99999999999999999999999999999999999999888773 2222 267789999999999999999
No 12
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=99.96 E-value=1.6e-27 Score=199.07 Aligned_cols=144 Identities=41% Similarity=0.651 Sum_probs=131.0
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
++||||+|+.+.++.+++++||+||+++++++.++.+|++.|++.|++||+ .|+.+|.++|.++|.+++++|++|
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~ 76 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK-----TWGKTSVAERANILNKIADRIEEN 76 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 579999999876678899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.++++|+|||+.++.. |+..+++.++++++.+....+.. .+.. .+...++.|+|+|||++|+||
T Consensus 77 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw 146 (480)
T cd07559 77 LELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSL---SEID-EDTLSYHFHEPLGVVGQIIPW 146 (480)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceeEEEEeccceEEEECCC
Confidence 999999999999999999975 99999999999999987765542 1222 355678999999999999999
No 13
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=99.96 E-value=2.2e-27 Score=198.14 Aligned_cols=149 Identities=36% Similarity=0.636 Sum_probs=131.4
Q ss_pred CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230 8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l 87 (163)
..+++||||+|+.+.++..++++||+||+++++++.++.+|++.+++.|++||+.+ .|++++..+|.++|.+++++|
T Consensus 2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~l 78 (476)
T cd07142 2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEG---PWPRMTGYERSRILLRFADLL 78 (476)
T ss_pred CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCC---chhhCCHHHHHHHHHHHHHHH
Confidence 34678999999976566789999999999999999999999999999999999721 499999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 88 TERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 88 ~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++|+++|+.++++|+|||..++.. |+..+++.+++++.+.++..+.. .+.. .+...++.|+|+|||++|+||
T Consensus 79 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~pw 151 (476)
T cd07142 79 EKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT---LPAD-GPHHVYTLHEPIGVVGQIIPW 151 (476)
T ss_pred HHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceEEEEEeceeeEEEECCC
Confidence 999999999999999999999864 99999999999999887766552 1211 234568999999999999999
No 14
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=99.96 E-value=2.7e-27 Score=199.85 Aligned_cols=147 Identities=35% Similarity=0.582 Sum_probs=131.4
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
+++||+|+|+...++.+++++||.||+++++++.++.+|+++|++.|+++|+.+ .|+.++..+|.++|.+++++|++
T Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~---~w~~~~~~~R~~~L~~~a~~l~~ 134 (538)
T PLN02466 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEG---PWPKMTAYERSRILLRFADLLEK 134 (538)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcC---ccccCCHHHHHHHHHHHHHHHHH
Confidence 578999999987667889999999999999999999999999999999999722 59999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|+++|+.++++|+|||..++. .||..+++.++||+.+..+..+.. .+.. .+...++.|+|+|||++|+||
T Consensus 135 ~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw 205 (538)
T PLN02466 135 HNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLT---VPAD-GPHHVQTLHEPIGVAGQIIPW 205 (538)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceEEEEEecceEEEEECCC
Confidence 999999999999999999996 599999999999999988776653 2222 234568999999999999999
No 15
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=99.96 E-value=2.3e-27 Score=199.05 Aligned_cols=148 Identities=39% Similarity=0.645 Sum_probs=132.0
Q ss_pred CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
.+++||+|+|+.+.++.+++++||+||+++++++.++.+|++.|++.|++||+.+ .|+.++.++|+++|.+++++|+
T Consensus 20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~---~W~~~~~~~R~~~L~~~a~~l~ 96 (501)
T PLN02766 20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHG---PWPRMSGFERGRIMMKFADLIE 96 (501)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---ccccCCHHHHHHHHHHHHHHHH
Confidence 4578999999986667889999999999999999999999999999999999722 4999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+++|+.+++.|+|||..++. .|+..+++.++|++..+.++.+.. .+.. .....++.|+|+|||++|+||
T Consensus 97 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw 168 (501)
T PLN02766 97 EHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGET---LKMS-RQLQGYTLKEPIGVVGHIIPW 168 (501)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCce---eccC-CCceEEEEeccceEEEEECCC
Confidence 9999999999999999999997 499999999999999988876652 1112 245578999999999999999
No 16
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=99.96 E-value=3.7e-27 Score=197.12 Aligned_cols=151 Identities=30% Similarity=0.540 Sum_probs=131.2
Q ss_pred CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
..++||||+|+.+.++..++++||+||+++++++.++.+|+++|++.|++||..+ .|+.+|..+|.++|.+++++|+
T Consensus 5 ~~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~---~W~~~~~~~R~~~L~~~a~~l~ 81 (486)
T cd07140 5 PHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENG---EWGKMNARDRGRLMYRLADLME 81 (486)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---chhcCCHHHHHHHHHHHHHHHH
Confidence 3578999999986667889999999999999999999999999999999999721 4999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCC-CCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPM-ENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+++|+.+++.|+|||..++. .||..+++.++||+.+..++.+... +..... .....++.|+|+|||++|+||
T Consensus 82 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~r~P~GVv~~I~Pw 157 (486)
T cd07140 82 EHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTI-PINQARPNRNLTLTKREPIGVCGIVIPW 157 (486)
T ss_pred HhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccCCCCceEEEEeeccceEEEEcCC
Confidence 9999999999999999999996 5999999999999999887765421 111101 123468999999999999999
No 17
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=99.96 E-value=2.3e-27 Score=197.83 Aligned_cols=145 Identities=34% Similarity=0.585 Sum_probs=129.2
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
+++||+|+|+.+ ++..++++||.||+++++++.++.+|+++|++.|+++|+ .|+.+|.++|+++|.+++++|++
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~ 75 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA-----EWGQTTPKARAECLLKLADVIEE 75 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHH
Confidence 478999999975 467899999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++++|+.++++|+|||..++.. |+..+++.++|++.....+.+.. .+....+...++.|+|+|||++|+||
T Consensus 76 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~Pw 147 (472)
T TIGR03374 76 NAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLA---AGEYLEGHTSMIRRDPLGVVASIAPW 147 (472)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cCccCCCceEEEEEecceEEEEECCC
Confidence 9999999999999999999974 99999999999999877665531 11111345678999999999999999
No 18
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.95 E-value=3.2e-27 Score=197.91 Aligned_cols=148 Identities=32% Similarity=0.553 Sum_probs=132.2
Q ss_pred CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
.+++||+|+|+...++..++++||+||+++++++.++.+|++.|++.|++||..+ .|+.+|..+|+++|.+++++|+
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~---~W~~~~~~~R~~~L~~~a~~l~ 95 (494)
T PRK09847 19 ENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERG---DWSLSSPAKRKAVLNKLADLME 95 (494)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---ccccCCHHHHHHHHHHHHHHHH
Confidence 3578999999877667889999999999999999999999999999999999722 5999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+++|+.+++.|+|||..++. .||..+++.++|++++++++.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 96 ~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~Pw 167 (494)
T PRK09847 96 AHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV---ATTS-SHELAMIVREPVGVIAAIVPW 167 (494)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceeEEEecceeEEEEECCC
Confidence 9999999999999999999886 499999999999999998887653 2222 345678999999999999999
No 19
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=99.95 E-value=3.1e-27 Score=197.32 Aligned_cols=143 Identities=27% Similarity=0.449 Sum_probs=129.7
Q ss_pred ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230 12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK 91 (163)
Q Consensus 12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~ 91 (163)
+||+|+|+.+. +..++++||+||+++++++.++.++++.+++.|++||+ .|+.++.++|.++|.+++++|++++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~ 74 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK-----EWRKVPAPRRGEIVRQIGEALRKKK 74 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 58999999765 67899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 92 SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 92 ~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++|++++++|+|||..++..|+..+++.++|++...+++.+.. .+....+...++.|+|+|||++|+||
T Consensus 75 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~pw 143 (478)
T cd07086 75 EALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLT---IPSERPGHRLMEQWNPLGVVGVITAF 143 (478)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEecceeEEEECCC
Confidence 9999999999999999999999999999999999988876653 12121344678999999999999999
No 20
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=99.95 E-value=6.2e-27 Score=195.51 Aligned_cols=145 Identities=27% Similarity=0.427 Sum_probs=131.0
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
++||+|+|+.+.++..++++||.||+++++++.++.++++++++.|++||+ .|+++|..+|.++|.+++++|.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~ 76 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL-----TWGQTSLAQRTSVLLRYQALLKEH 76 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHH
Confidence 679999999766667899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.+++.|+|||..++..|+..+++.++|++.....+.++. .+....+...++.|+|+|||++|+||
T Consensus 77 ~~~l~~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~ 146 (477)
T TIGR01722 77 RDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGET---STQVATRVDVYSIRQPLGVCAGITPF 146 (477)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEcccceEEEEccC
Confidence 99999999999999999999999999999999998887776653 11111344568899999999999999
No 21
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=99.95 E-value=7.4e-27 Score=195.08 Aligned_cols=145 Identities=32% Similarity=0.516 Sum_probs=130.3
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
++||||+|+.+.++..++++||+||+++++++.++.+|++.+++.|++||+ .|+.+|..+|.++|.+++++|++|
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~ 76 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP-----AWSATPVLKRQQVMFKFRQLLEEN 76 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHH
Confidence 579999999865567899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.+++.|+|||..++..|+..+++.++|++.....+.++. .+....+...++.|+|+|||++|+||
T Consensus 77 ~~el~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~p~ 146 (478)
T cd07085 77 LDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY---LENVARGIDTYSYRQPLGVVAGITPF 146 (478)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCee---cccCCCCceeEEEEecceEEEEECCC
Confidence 99999999999999999999999999999999998776665553 11111345678999999999999999
No 22
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=99.95 E-value=1.2e-26 Score=193.88 Aligned_cols=146 Identities=34% Similarity=0.595 Sum_probs=129.5
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCC-CCCHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS-SASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~-~~~~~~R~~~L~~~~~~l~ 88 (163)
+++||+|+|+.+.++..++++||.||+++++++.++.+|++.|++.|++||.. .|+ .+|..+|.++|.+++++|+
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~----~W~~~~~~~~R~~~L~~~a~~l~ 82 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET----DWGLKVSGSKRGRCLSKLADLME 82 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh----hhcccCCHHHHHHHHHHHHHHHH
Confidence 47899999998766778999999999999999999999999999999999971 399 9999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+++|+.++++|+|||..++. .|+..+++.++++++++++..+.. .+.. .+...++.|+|+|||++|+||
T Consensus 83 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~P~ 154 (481)
T cd07143 83 RNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV---IETD-IKKLTYTRHEPIGVCGQIIPW 154 (481)
T ss_pred HhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceEEEEEecceeEEEECCC
Confidence 9999999999999999997654 599999999999999988776552 1111 345678999999999999999
No 23
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=99.95 E-value=1.3e-26 Score=194.39 Aligned_cols=151 Identities=28% Similarity=0.388 Sum_probs=131.5
Q ss_pred CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230 8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l 87 (163)
..+++||+|+|+.+.++..++++||.||+++++++.++.+|++++++.|+++|+ .|+.++..+|.++|.++++.|
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~-----~W~~~~~~~R~~iL~~~a~~l 88 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK-----AWAKTPLWKRAELLHKAAAIL 88 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHH
Confidence 345889999999765667899999999999999999999999999999999999 999999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhcccccc-cc-CCC--CCCceeEEEEeccceEEEEccC
Q 031230 88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKA-PV-SLP--MENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~-~~-~~~--~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++|+++|+.+++.|+|||..++..|+..+++.++|+++++.++.+.... .. ..+ ..+...++.|+|+|||++|+||
T Consensus 89 ~~~~~el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~ 168 (496)
T PLN00412 89 KEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPF 168 (496)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCC
Confidence 9999999999999999999999999999999999999988776543110 00 011 1233568899999999999999
No 24
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=99.95 E-value=1.1e-26 Score=194.37 Aligned_cols=143 Identities=29% Similarity=0.392 Sum_probs=129.5
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
.+||+|+|+.+ ++..++++||+||+++++++.++.++++++++.|++||+ .|+.+|..+|.++|.+++++|+++
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~ 75 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP-----AWARLSFEERQAIVERFAALLEEN 75 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHhH
Confidence 47999999875 356799999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+++++.|+|||..++..|+..+++.++++++...++.+... . ...+...++.|+|+|||++|+||
T Consensus 76 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~I~Pw 144 (487)
T PRK09457 76 KEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKR---S-EMADGAAVLRHRPHGVVAVFGPY 144 (487)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcee---c-cCCCceeEEEEeccEEEEEECCC
Confidence 999999999999999999999999999999999998877766531 1 12345678999999999999999
No 25
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=99.95 E-value=1.3e-26 Score=193.83 Aligned_cols=145 Identities=33% Similarity=0.520 Sum_probs=128.2
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHHHH
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD-WSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~-w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
++||||+|+. ++..++++||+||+++++++.++.++++.+++.|++||. . |+.+|..+|.++|.+++++|++
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~~w~~~~~~~R~~~L~~~a~~l~~ 74 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK-----GPWGKMTVAERADLLYAVADEIER 74 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH-----hhHhhCCHHHHHHHHHHHHHHHHH
Confidence 5799999986 467899999999999999999999999999999999999 8 9999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCC-CCCCceeEEEEeccceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSL-PMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|+++|+.+++.|+|||..++.. |+..+++.++++++.+..+.+... +... ...+...++.|+|+|||++|+||
T Consensus 75 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~I~p~ 149 (481)
T TIGR03216 75 RFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF-EMATPDGKGALNYAVRKPLGVVGVISPW 149 (481)
T ss_pred hHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccc-cccCCCCCCceeEEEEeccceEEEECCC
Confidence 9999999999999999999975 999999999999999877655421 1111 11234678999999999999999
No 26
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=99.95 E-value=1.4e-26 Score=193.36 Aligned_cols=148 Identities=32% Similarity=0.542 Sum_probs=129.3
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHHHH
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD-WSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~-w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
.+||||+|+.+.++..++++||.||+++++++.++.+|++.+++.|++||+ . |+.++..+|.++|.+++++|++
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~~w~~~~~~~R~~~L~~~a~~l~~ 75 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-----SAWAKTTPAERGRILLRLADLIEQ 75 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH-----hhhccCCHHHHHHHHHHHHHHHHH
Confidence 368999999866667899999999999999999999999999999999998 5 9999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccc-cCC-CCCCceeEEEEeccceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAP-VSL-PMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~-~~~-~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++++|+.++++|+|||..++.. |+..+++.+++++++...+.+..... .+. ...+...++.|+|+|||++|+||
T Consensus 76 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~ 152 (477)
T cd07113 76 HGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPW 152 (477)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCC
Confidence 9999999999999999999985 99999999999999887766542100 111 11234678999999999999999
No 27
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=99.95 E-value=1.2e-26 Score=193.68 Aligned_cols=144 Identities=35% Similarity=0.538 Sum_probs=129.3
Q ss_pred ccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
+++||+|+|+.+. ..++++||. ||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|.+++++|+
T Consensus 1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~ 73 (473)
T cd07097 1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP-----AWRRTSPEARADILDKAGDELE 73 (473)
T ss_pred CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence 4679999998753 347999999 5999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+++|+.+++.|+|||..++..|+..+++.++||++...++.+.. .+....+...++.|+|+|||++|+||
T Consensus 74 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~P~ 145 (473)
T cd07097 74 ARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGET---LPSTRPGVEVETTREPLGVVGLITPW 145 (473)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEEeeeeEEEEccc
Confidence 9999999999999999999999999999999999999988877653 12122355678999999999999999
No 28
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=99.95 E-value=1.5e-26 Score=193.10 Aligned_cols=141 Identities=23% Similarity=0.451 Sum_probs=127.1
Q ss_pred eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230 13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS 92 (163)
Q Consensus 13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~ 92 (163)
+|+|+|+.+ +..++++||.||+++++++.++.++++++++.|++||+ .|+++|.++|.++|.+++++|++|++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ 74 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK-----EWRDVPAPKRGEIVRQIGDALRKKKE 74 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 799999874 47799999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 93 ELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 93 ~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|++++++|+|||..++..|+..+++.++|+++..+.+.+.. .+....+...++.|+|+|||++|+||
T Consensus 75 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~ 142 (474)
T cd07130 75 ALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLT---IPSERPGHRMMEQWNPLGVVGVITAF 142 (474)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCcc---ccCCCCCceEEEEEecceeEEEEccC
Confidence 999999999999999999999999999999998877665542 12122345568899999999999999
No 29
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.95 E-value=1.8e-26 Score=192.59 Aligned_cols=146 Identities=36% Similarity=0.621 Sum_probs=130.1
Q ss_pred CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
..++||||+|+.. ++..++++||+||+++++++.++.++++++++.|+++|+ .|+.++.++|.++|.+++++|.
T Consensus 2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~ 75 (475)
T PRK13473 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP-----EWSQTTPKERAEALLKLADAIE 75 (475)
T ss_pred CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence 3468999999875 567899999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++++|+.++++|+|||..++.. |+..+++.+++++..++.+.+.. .+....+...++.|+|+|||++|+||
T Consensus 76 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~r~P~GVv~~I~p~ 148 (475)
T PRK13473 76 ENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKA---AGEYLEGHTSMIRRDPVGVVASIAPW 148 (475)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceeEEEEecceeEEEEccC
Confidence 99999999999999999999864 99999999999999888776652 11111244568999999999999999
No 30
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=99.95 E-value=2e-26 Score=192.73 Aligned_cols=142 Identities=31% Similarity=0.444 Sum_probs=128.2
Q ss_pred ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230 12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK 91 (163)
Q Consensus 12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~ 91 (163)
+||+|+|+.+ ++.+++++||.||+++++++.++.+|++++++.|++||+ .|+.+|.++|.++|.+++++|++|+
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~ 74 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP-----AWARLSLEERIAVVQRFAALLEERK 74 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHHhH
Confidence 4899999875 467899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 92 SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 92 ~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++|+.+++.|+|||..++..|+..+++.+++++.....+.+.. . ....+...++.|+|+|||++|+||
T Consensus 75 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~---~-~~~~~~~~~~~~~P~GVv~~I~Pw 142 (484)
T TIGR03240 75 EALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGES---E-NPMPDGRAVLRHRPHGVVAVFGPY 142 (484)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---c-cCCCCceeEEEEecccEEEEECCC
Confidence 9999999999999999999999999999999998887766543 1 111344578999999999999999
No 31
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=99.95 E-value=1.9e-26 Score=194.06 Aligned_cols=144 Identities=31% Similarity=0.461 Sum_probs=130.8
Q ss_pred CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l 87 (163)
.++.||+|+|+.+ +..++++||+| |+++++++.++.++++.+++.|++||. .|+.++..+|.++|.+++++|
T Consensus 32 ~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l 104 (512)
T cd07124 32 EYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP-----TWRRTPPEERARLLLRAAALL 104 (512)
T ss_pred ccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHH
Confidence 3588999999863 56799999998 999999999999999999999999999 999999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 88 TERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 88 ~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++++++|+.+++.|+|||..++..|+..+++.++|+++++.++.+.. .+.. .+...++.++|+|||++|+||
T Consensus 105 ~~~~~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~pw 176 (512)
T cd07124 105 RRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFP---VEMV-PGEDNRYVYRPLGVGAVISPW 176 (512)
T ss_pred HHCHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceeEEEEecceEEEEECCC
Confidence 99999999999999999999999999999999999999998885542 1212 345678999999999999999
No 32
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=99.95 E-value=2e-26 Score=193.87 Aligned_cols=146 Identities=33% Similarity=0.534 Sum_probs=131.0
Q ss_pred CCccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230 8 PSRQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86 (163)
Q Consensus 8 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~ 86 (163)
...++||+|+|+.+ +..++++||+ ||+++++++.++.+|++.|++.|++||+ .|+.+|..+|.++|.+++++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~ 103 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE-----AWKKTPVRERAGILRKAAAI 103 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHH
Confidence 34578999999974 4568999999 5999999999999999999999999999 99999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|++++++|+.+++.|+|||..++..|+..+++.++|+++++.++.+.. .+....+...++.|+|+|||++|+||
T Consensus 104 l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~P~ 177 (511)
T TIGR01237 104 MERRRHELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQG---VNLDIEGETNRYFYQPRGVAVVISPW 177 (511)
T ss_pred HHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEecceeEEEECCC
Confidence 999999999999999999999999999999999999999998887642 22222355678999999999999999
No 33
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=99.95 E-value=1.8e-26 Score=193.75 Aligned_cols=145 Identities=24% Similarity=0.301 Sum_probs=123.9
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHH-hhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA-LSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a-~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
++||||+|+.+. +.+++++||+||+++++++.++ +|+++||++|++| |+ .|+.+|..+|+++|.+++++|++
T Consensus 2 ~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~-----~W~~~~~~~Ra~~L~~~a~~l~~ 74 (513)
T cd07128 2 QSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP-----ALRALTFHERAAMLKALAKYLME 74 (513)
T ss_pred ceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc-----hhhcCCHHHHHHHHHHHHHHHHH
Confidence 679999999763 5789999999999999999876 8999999999997 78 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhcccccc-----ccCCCCCC-ceeEEEEec-cceEEEEcc
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKA-----PVSLPMEN-FKSYVLKEP-IGVVGLITP 162 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~-----~~~~~~~~-~~~~~~r~P-~GVV~~IsP 162 (163)
|+++|+.+ +.|+|||+.++..||..+++.++||++++.++.++... ..+....+ ...++.|+| +|||++|+|
T Consensus 75 ~~~~la~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~p 153 (513)
T cd07128 75 RKEDLYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINA 153 (513)
T ss_pred HHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECC
Confidence 99999996 89999999999999999999999999998887642100 01111112 245788999 599999999
Q ss_pred C
Q 031230 163 W 163 (163)
Q Consensus 163 w 163 (163)
|
T Consensus 154 w 154 (513)
T cd07128 154 F 154 (513)
T ss_pred c
Confidence 9
No 34
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=99.95 E-value=2.3e-26 Score=193.57 Aligned_cols=146 Identities=32% Similarity=0.427 Sum_probs=130.8
Q ss_pred CCccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230 8 PSRQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86 (163)
Q Consensus 8 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~ 86 (163)
...++||+|+|+.+ +..++++||+ ||+++++++.++.++++.+++.|++||+ .|+.++..+|.++|.+++++
T Consensus 35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~ 107 (514)
T PRK03137 35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE-----TWKKWSPEDRARILLRAAAI 107 (514)
T ss_pred cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHH
Confidence 34578999999874 4679999999 6999999999999999999999999999 99999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|++++++|+.+++.|+|||..++..|+..+++.++||++++.++.+... .. ...+...++.|+|+|||++|+||
T Consensus 108 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~--~~-~~~g~~~~~~~~P~GVv~~I~Pw 181 (514)
T PRK03137 108 IRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKP--VE-SRPGEHNRYFYIPLGVGVVISPW 181 (514)
T ss_pred HHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--cc-CCCCceEEEEEecCcEEEEECCC
Confidence 9999999999999999999999999999999999999999887753321 11 12355678999999999999999
No 35
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=99.95 E-value=2e-26 Score=192.91 Aligned_cols=144 Identities=33% Similarity=0.610 Sum_probs=129.0
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
++||+|+|+.+.++..++++||.||+++++++.++.++++.+++.|++||+ .|+.++..+|.++|.+++++|+++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~~~ 76 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK-----RWAELKAAERKRYLHKIADLIEQH 76 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 569999999876667899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.++++|+|||..++..|+..+++.++++++.+.+...... .+. .....++.|+|+|||++|+||
T Consensus 77 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~P~Gvv~~I~p~ 145 (488)
T TIGR02299 77 ADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRT--YPV--DTHLNYTVRVPVGPVGLITPW 145 (488)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCcc--ccC--CCceEEEEEEecceEEEECCC
Confidence 999999999999999999999999999999999998874433221 111 234568999999999999999
No 36
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=99.95 E-value=2.5e-26 Score=192.08 Aligned_cols=144 Identities=44% Similarity=0.750 Sum_probs=129.6
Q ss_pred eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230 13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS 92 (163)
Q Consensus 13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~ 92 (163)
||+|+|+...++..++++||.||+++++++.++.++++.+++.|++||+.+ .|+.+|..+|.++|.+++++|+++++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~l~~~~~ 77 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSG---EWPHLPAQERAALLFRIADKIREDAE 77 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCC---chhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 689999876566789999999999999999999999999999999999722 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 93 ELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 93 ~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+.+++.|+|||..++..|+..+++.++++++++++..+.. .+.. .+...++.|+|+|||++|+||
T Consensus 78 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GvV~~I~p~ 144 (482)
T cd07119 78 ELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEV---YDVP-PHVISRTVREPVGVCGLITPW 144 (482)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceEEEEEeeeeeEEEEcCC
Confidence 999999999999999999999999999999999988765542 1222 455688999999999999999
No 37
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=99.95 E-value=2.3e-26 Score=191.63 Aligned_cols=142 Identities=44% Similarity=0.718 Sum_probs=128.4
Q ss_pred eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230 13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS 92 (163)
Q Consensus 13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~ 92 (163)
||+|+|+.+.++..++++||+||+++++++.++.++++++++.|++||+ .|+.+|.++|.++|.+++++|+++++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ 75 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG-----EWASMTPEERGRILRRIAELIRERNE 75 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 6999999766678899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 93 ELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 93 ~la~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+.++++|+|||..++ ..|+..+++.|+++++.+++..+.. .+.. .....++.|+|+|||++|+||
T Consensus 76 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~Gvv~~I~p~ 143 (467)
T TIGR01804 76 ELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEI---IPLP-IPSFSYTIREPLGVCVGIGAW 143 (467)
T ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCcc---ccCC-CCceEEEEEeeeeEEEEECCC
Confidence 99999999999999999 5699999999999999988766552 1222 124568999999999999999
No 38
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=99.95 E-value=3.3e-26 Score=190.87 Aligned_cols=146 Identities=38% Similarity=0.589 Sum_probs=128.3
Q ss_pred ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230 12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK 91 (163)
Q Consensus 12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~ 91 (163)
+||+|+|+.+.++..++++||+||+++++++.++.++++.|+++|++||+.+ .|+.+|..+|.++|.+++++|++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~---~W~~~~~~~R~~~L~~~a~~l~~~~ 77 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNG---PWPRLSPAERAAVLRRLADALEARA 77 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCC---chhhCCHHHHHHHHHHHHHHHHHhH
Confidence 4899999876556789999999999999999999999999999999999821 3999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 92 SELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 92 ~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++|+.++++|+|||..++.. |+..+++.+++++++++++.+... .+.. .+...++.|+|+|||++|+||
T Consensus 78 ~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~P~Gvv~~I~p~ 147 (471)
T cd07139 78 DELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEER--RPGS-GGGHVLVRREPVGVVAAIVPW 147 (471)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--ccCC-CCceEEEEEEeccEEEEEcCC
Confidence 99999999999999988754 999999999999999887765421 1111 245678999999999999999
No 39
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=99.95 E-value=2.7e-26 Score=191.20 Aligned_cols=143 Identities=38% Similarity=0.569 Sum_probs=129.6
Q ss_pred eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230 13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS 92 (163)
Q Consensus 13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~ 92 (163)
||+|+|+...++..++++||.||+++++++.++.++++.+++.|++||+ .|+.+|.++|.++|.++++.|+++++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ 75 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK-----AWERLPAIERAAYLRKLADLIRENAD 75 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 6899998765678899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 93 ELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 93 ~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|+.+++.|+|||..++..|+..+++.+++++.++.+..+.. .+....+...++.|+|+|||++|+||
T Consensus 76 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~ 143 (468)
T cd07088 76 ELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEI---IPSDRPNENIFIFKVPIGVVAGILPW 143 (468)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcc---ccCccccceeEEEEecceeEEEEccC
Confidence 999999999999999999999999999999999887776543 22221245678999999999999999
No 40
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=99.95 E-value=3.2e-26 Score=190.76 Aligned_cols=139 Identities=39% Similarity=0.634 Sum_probs=127.2
Q ss_pred ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230 12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK 91 (163)
Q Consensus 12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~ 91 (163)
+||+|+|+.+.++.+++++||.||+++++++.++.++++++++.|++||+ .|+++|..+|.++|.+++++|++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~ 75 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP-----AWSATSVEERAALLERIAEAYEARA 75 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 48999999876667899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 92 SELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 92 ~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++|++++++|+|||..++.. |+..+++.++++++.++++.+.. .....++.|+|+|||++|+||
T Consensus 76 ~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~p~ 140 (466)
T cd07138 76 DELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEE--------RRGNSLVVREPIGVCGLITPW 140 (466)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccc--------cCceEEEEEeecceEEEECCC
Confidence 99999999999999999864 99999999999999988775542 123467899999999999999
No 41
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=99.95 E-value=3.8e-26 Score=190.72 Aligned_cols=144 Identities=17% Similarity=0.229 Sum_probs=126.1
Q ss_pred ceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCC--CCCCHHHH----HHHHHHHHH
Q 031230 12 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDW--SSASGAFR----AKYLRAIAA 85 (163)
Q Consensus 12 ~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w--~~~~~~~R----~~~L~~~~~ 85 (163)
+||+|+|+.+ +..++++||.||+++++++.++.+|+++|+++|++||+ .| ..++..+| .++|.++++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~-----~W~~~~~~~~~R~l~~~~il~~~a~ 73 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK-----SGLHNPLKNPERYLLYGDVSHRVAH 73 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----hccccCCCHHHHhhhHHHHHHHHHH
Confidence 4799999874 46799999999999999999999999999999999999 77 56779999 899999999
Q ss_pred HHHHh--HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 86 KITER--KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 86 ~l~~~--~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.|+++ .++|++++++|+|||+.++..||..+++.++||++...++.+... ..+....+...+++|+|+|||++|+||
T Consensus 74 ~l~~~~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~v~r~P~GVV~~I~Pw 152 (489)
T cd07126 74 ELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSF-NVPGDHQGQQSSGYRWPYGPVAIITPF 152 (489)
T ss_pred HHHcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcee-ccCCCCCCceeEEEEecceEEEEECCC
Confidence 99999 599999999999999999999999999999999999877765421 011112355679999999999999999
No 42
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=99.95 E-value=4.3e-26 Score=190.27 Aligned_cols=147 Identities=29% Similarity=0.429 Sum_probs=131.1
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSA-SGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~-~~~~R~~~L~~~~~~l~ 88 (163)
+++||||+|+.+. +.+++++||+||+++++++.++.+|+++|++.|++||+ .|+.+ +..+|.++|.+++++|.
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~~R~~~L~~~a~~l~ 75 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR-----GWWPTMPLEERIDCLHKFADLLK 75 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhcCCHHHHHHHHHHHHHHHH
Confidence 4679999999864 67899999999999999999999999999999999999 99988 99999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCC--CCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLP--MENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++++|+++++.|+|||..++..|+..+++.++++++.+.++.+... +.... ..+...++.|+|+|||++|+||
T Consensus 76 ~~~~el~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~ 151 (473)
T cd07082 76 ENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSL-PGDWFPGTKGKIAQVRREPLGVVLAIGPF 151 (473)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cccccccCCCceeEEEEecceEEEEECCc
Confidence 99999999999999999999988999999999999999988866531 11110 1245678999999999999999
No 43
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=99.94 E-value=4.3e-26 Score=190.49 Aligned_cols=144 Identities=38% Similarity=0.612 Sum_probs=129.6
Q ss_pred ceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 12 LFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 12 ~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
+||||+|+.+.++..++++||.| ++++++++.++.+|++++++.|++||+ .|+.++..+|.++|.+++++|.++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~l~~~a~~l~~~ 75 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP-----EWRKVPAPRRAEYLFRAAELLKKR 75 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHH
Confidence 48999999765678899999999 689999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|++++++|+|||..++..|+..+++.+++++...+++.+.. .+....+...++.|+|+|||++|+||
T Consensus 76 ~~ela~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~p~ 145 (478)
T cd07131 76 KEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGET---VPSELPNKDAMTRRQPIGVVALITPW 145 (478)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcc---cccCCCCceEEEEeeceeEEEEECCc
Confidence 99999999999999999998899999999999999988766553 12222344678999999999999999
No 44
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=99.94 E-value=7.4e-26 Score=189.19 Aligned_cols=150 Identities=34% Similarity=0.645 Sum_probs=131.8
Q ss_pred CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230 8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l 87 (163)
.++++||+|+|+.+.++..++++||+||+++++++.++.++++++++.|++||+. +..|+.+|.++|.++|.+++++|
T Consensus 5 ~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~--~~~W~~~~~~~R~~~L~~~a~~l 82 (481)
T cd07141 5 KYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKL--GSPWRTMDASERGRLLNKLADLI 82 (481)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhc--cCccccCCHHHHHHHHHHHHHHH
Confidence 4568899999998766788999999999999999999999999999999999971 01499999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 88 TERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 88 ~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+++++|+.++++|+|||..++. .|+..+++.+++++++++++.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 83 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~p~ 155 (481)
T cd07141 83 ERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKT---IPMD-GDFFTYTRHEPVGVCGQIIPW 155 (481)
T ss_pred HHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCce---ecCC-CCceEEEEEeceeEEEEEccC
Confidence 99999999999999999997764 599999999999999988887653 2222 234578999999999999999
No 45
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=99.94 E-value=7.6e-26 Score=189.28 Aligned_cols=146 Identities=36% Similarity=0.633 Sum_probs=130.3
Q ss_pred CccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD-WSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~-w~~~~~~~R~~~L~~~~~~l 87 (163)
..++||||+|+.+.++..++++||+||+++++++.++.++++.+++.|++||. . |+.+|.++|.++|.+++++|
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~-----~~w~~~~~~~R~~iL~~~a~~l 81 (484)
T cd07144 7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE-----SWWSKVTGEERGELLDKLADLV 81 (484)
T ss_pred CcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----hhHhcCCHHHHHHHHHHHHHHH
Confidence 35789999999865567899999999999999999999999999999999998 6 88999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHH-HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 88 TERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 88 ~~~~~~la~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++++++|+.++++|+|||..++ ..|+..+++.+++++++++++.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 82 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~P~GvV~~I~p~ 154 (484)
T cd07144 82 EKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKT---IPTS-PNKLAYTLHEPYGVCGQIIPW 154 (484)
T ss_pred HHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCce---ecCC-CCceEEEEEecceEEEEECcC
Confidence 9999999999999999999776 5699999999999999998886542 1212 345578999999999999999
No 46
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=99.94 E-value=9.4e-26 Score=188.37 Aligned_cols=145 Identities=40% Similarity=0.667 Sum_probs=129.2
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCC--CCCCHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDW--SSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w--~~~~~~~R~~~L~~~~~~l 87 (163)
.++||||+|+.+.++..++++||.||+++++++.++.++++.+++.|++||+ .| +.++.++|.++|.+++++|
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~~~w~~~~~~~R~~~L~~~a~~l 78 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFE-----TGWWRKMDPRERGRLLNKLADLI 78 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcc-----cCccccCCHHHHHHHHHHHHHHH
Confidence 4789999998765667899999999999999999999999999999999999 75 5999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 88 TERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 88 ~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+++++|+.+++.|+|||..++. .|+..+++.+++++++.++..+.. .+.. .+...++.|+|+|||++|+||
T Consensus 79 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~p~ 151 (476)
T cd07091 79 ERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKT---IPID-GNFLAYTRREPIGVCGQIIPW 151 (476)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCC-CCceEEEEEeceeEEEEECCC
Confidence 99999999999999999996664 599999999999999887776552 2222 355678999999999999999
No 47
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=99.94 E-value=8e-26 Score=190.81 Aligned_cols=146 Identities=25% Similarity=0.280 Sum_probs=130.0
Q ss_pred CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l 87 (163)
..++||+|+|+.+ ++.+++++||.| |+++++++.++.+|++.|++.|+++|+ .|+.+|..+|.++|.+++++|
T Consensus 31 ~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~-----~W~~~~~~~R~~~L~k~a~~l 104 (533)
T TIGR01236 31 EIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK-----DWSALPFYDRAAIFLKAADLL 104 (533)
T ss_pred eeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHH
Confidence 4578999999974 456899999997 899999999999999999999999999 999999999999999999999
Q ss_pred H-HhHHHHHHHHHHHcCCCHHHHHHh-HHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEecc-ceEEEEccC
Q 031230 88 T-ERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPI-GVVGLITPW 163 (163)
Q Consensus 88 ~-~~~~~la~~~~~e~Gkp~~~a~~e-v~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~-GVV~~IsPw 163 (163)
+ +++++|+.+++.|+|||..++..| |..+++.++|++.++.++.+.. ......+...++.|+|+ |||++|+||
T Consensus 105 ~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~---~~~~~~~~~~~~~~~P~~GVv~~I~Pw 180 (533)
T TIGR01236 105 SGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQ---PSESAPGEWNRTDYRPLEGFVYAISPF 180 (533)
T ss_pred HhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEecCCCEEEEEeCC
Confidence 9 599999999999999999999875 9999999999999988876653 11111345678999999 999999999
No 48
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=99.94 E-value=7.8e-26 Score=190.35 Aligned_cols=147 Identities=22% Similarity=0.315 Sum_probs=125.4
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHh-hccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQAL-SRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~-~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
.++||+|+|+.+. +.+++++||+||+++++++. +.+|+++|++.|++|| + .|+.+|..+|+++|.+++++|+
T Consensus 5 ~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~-----~W~~~~~~eR~~~L~~~a~~l~ 77 (521)
T PRK11903 5 LANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA-----ALRALTYAQRAALLAAIVKVLQ 77 (521)
T ss_pred hhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh-----hhhhCCHHHHHHHHHHHHHHHH
Confidence 3679999999753 56799999999999999997 8899999999999995 8 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccc-c-CCC--C-CCceeEEEEec-cceEEEEcc
Q 031230 89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAP-V-SLP--M-ENFKSYVLKEP-IGVVGLITP 162 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~-~-~~~--~-~~~~~~~~r~P-~GVV~~IsP 162 (163)
+++++|+.++++|+|||+.++..||..+++.++||+.++..+.+..... . ..+ . .....++.|+| +|||++|+|
T Consensus 78 ~~~~ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~p 157 (521)
T PRK11903 78 ANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINA 157 (521)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECC
Confidence 9999999999999999999999999999999999999987765432100 0 000 0 12335788999 699999999
Q ss_pred C
Q 031230 163 W 163 (163)
Q Consensus 163 w 163 (163)
|
T Consensus 158 w 158 (521)
T PRK11903 158 F 158 (521)
T ss_pred c
Confidence 9
No 49
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=99.94 E-value=1.3e-25 Score=188.54 Aligned_cols=147 Identities=29% Similarity=0.404 Sum_probs=131.2
Q ss_pred CCccceeCceEecCCCCCeeeeecCC-CCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230 8 PSRQLFINGEWREPVLKKRIPIVNPT-TEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86 (163)
Q Consensus 8 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~ 86 (163)
..+++||+|+|+.+ +..++++||. ||+++++++.++.+|++++++.|++||+ .|+.+|..+|.++|.+++++
T Consensus 17 ~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~ 89 (500)
T cd07083 17 RAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK-----TWKDWPQEDRARLLLKAADL 89 (500)
T ss_pred ccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHH
Confidence 34678999999874 4678999998 6999999999999999999999999999 99999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|++++++|+.+++.|+|||..++..|+..+++.+++|++++.++.+.... .+. ..+...++.|+|+|||++|+||
T Consensus 90 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~P~GVv~~I~P~ 164 (500)
T cd07083 90 LRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVE-VVP-YPGEDNESFYVGLGAGVVISPW 164 (500)
T ss_pred HHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCC-CCCceEEEEEeccceEEEEcCC
Confidence 99999999999999999999998889999999999999999888765311 111 1355678899999999999999
No 50
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.94 E-value=1.1e-25 Score=193.94 Aligned_cols=142 Identities=25% Similarity=0.350 Sum_probs=124.0
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHH-hhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA-LSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a-~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
++||||+|+.+. +..++++||+||+++++++.++ +|+++|++.|+++ |+ .|+.+|..+|+++|.+++++|++
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~-----~W~~~~~~eR~~~L~~~a~~l~~ 74 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP-----ALRALTFHERARMLKALAQYLSE 74 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch-----hhhcCCHHHHHHHHHHHHHHHHH
Confidence 579999999763 5679999999999999999999 5999999999996 99 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhc--------cccccccCCCCC-CceeEEEEecc-ceEEE
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD--------AKQKAPVSLPME-NFKSYVLKEPI-GVVGL 159 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~--------~~~~~~~~~~~~-~~~~~~~r~P~-GVV~~ 159 (163)
|+++|+. +++|+|||+.++..||..+++.++||+..++++. ++. .+.... +...++.|+|+ |||++
T Consensus 75 ~~~ela~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~P~~Gvv~~ 150 (663)
T TIGR02278 75 RKEALYA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEF---EPLSKDGSFQGRHILTPKGGVAVQ 150 (663)
T ss_pred HHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCce---eccCCCCccceEEEEEeCCceEEE
Confidence 9999999 5999999999999999999999999999987743 221 111111 23578999998 99999
Q ss_pred EccC
Q 031230 160 ITPW 163 (163)
Q Consensus 160 IsPw 163 (163)
|+||
T Consensus 151 I~pw 154 (663)
T TIGR02278 151 INAF 154 (663)
T ss_pred EcCC
Confidence 9999
No 51
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=99.94 E-value=7.3e-26 Score=189.81 Aligned_cols=134 Identities=25% Similarity=0.417 Sum_probs=123.4
Q ss_pred CCccceeCceEecCCCCCeeeeecCCCC-CeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230 8 PSRQLFINGEWREPVLKKRIPIVNPTTE-EIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86 (163)
Q Consensus 8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg-~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~ 86 (163)
...++||+|+|+. ++..++++||.|+ +++++++.++.+|++.|++.|+++|+ .|+++|..+|+++|.+++++
T Consensus 36 ~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~-----~W~~~~~~~R~~~L~~~a~~ 108 (500)
T TIGR01238 36 WQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP-----TWNATPAKERAAKLDRLADL 108 (500)
T ss_pred eecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHH
Confidence 3468999999987 4678999999996 89999999999999999999999999 99999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 87 ITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 87 l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|++++++|+.++++|+|||..++..||..+++.++++++..+.+.+. +.++|+|||++|+||
T Consensus 109 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~---------------~~~~P~GVV~~I~pw 170 (500)
T TIGR01238 109 LELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE---------------FSVESRGVFVCISPW 170 (500)
T ss_pred HHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc---------------eeccCcceEEEECCC
Confidence 99999999999999999999999999999999999999987654321 368999999999999
No 52
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=99.94 E-value=1.9e-25 Score=186.12 Aligned_cols=140 Identities=29% Similarity=0.487 Sum_probs=124.9
Q ss_pred ceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 031230 16 GEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELA 95 (163)
Q Consensus 16 g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la 95 (163)
|+|+.+.++..++++||+||+++++++.++.+|++.+++.|++||+ .|+.++..+|.++|.+++++|++++++|+
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela 75 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK-----EWAATLPQERAEILEKAAQILEERRDEIV 75 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5677655567899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 96 NLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 96 ~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+++.|+|||..++..|+..+++.+++++.+...+.+.. .+....+...++.|+|+|||++|+||
T Consensus 76 ~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~ 140 (465)
T cd07151 76 EWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRI---LPSDVPGKENRVYREPLGVVGVISPW 140 (465)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCcc---ccCCCCCceeEEEEecceEEEEECCC
Confidence 999999999999998999999999999999887765542 11111355678999999999999999
No 53
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=99.94 E-value=3.6e-25 Score=186.58 Aligned_cols=145 Identities=21% Similarity=0.215 Sum_probs=128.4
Q ss_pred CccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230 9 SRQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 9 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l 87 (163)
..++||+|+|+.+ +.+++++||+| |+++++++.++.+|++.|++.|++||. .|+.+|..+|.++|.+++++|
T Consensus 32 ~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l 104 (522)
T cd07123 32 EIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK-----EWARMPFEDRAAIFLKAADLL 104 (522)
T ss_pred ccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHH
Confidence 3578999999864 56899999995 999999999999999999999999999 999999999999999999999
Q ss_pred HH-hHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEecc-ceEEEEccC
Q 031230 88 TE-RKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPI-GVVGLITPW 163 (163)
Q Consensus 88 ~~-~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~-GVV~~IsPw 163 (163)
++ ++++|+.++++|+|||..++.. |+..+++.++|++.++.++.+... .....+...++.|+|+ |||++|+||
T Consensus 105 ~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~P~~GVv~~I~Pw 180 (522)
T cd07123 105 SGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQP---LSSPAGVWNRLEYRPLEGFVYAVSPF 180 (522)
T ss_pred HhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccc---cCCCCCceeEEEEecCCceEEEECCc
Confidence 97 8999999999999999999975 899999999999999888766531 1111245678999999 999999999
No 54
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=99.94 E-value=3.2e-25 Score=186.83 Aligned_cols=144 Identities=28% Similarity=0.428 Sum_probs=129.9
Q ss_pred ccceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
.--||+|+|.. ++.+++++||.| |+++++++.++.+|++.+++.|++||+ .|+.++.++|.++|.+++++|+
T Consensus 33 ~~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~ 105 (518)
T cd07125 33 AIPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA-----GWSATPVEERAEILEKAADLLE 105 (518)
T ss_pred cCceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHH
Confidence 34589999973 578899999999 999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++++|+.+++.|+|||..++..|+..+++.++++++++.++.+... .+.+ .+...++.++|+|||++|+||
T Consensus 106 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~--~~~~-~g~~~~~~~~P~GVV~~I~p~ 177 (518)
T cd07125 106 ANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPE--LPGP-TGELNGLELHGRGVFVCISPW 177 (518)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--ccCC-CCceeEEEEecccEEEEECCc
Confidence 99999999999999999999989999999999999999988776531 2222 245678999999999999999
No 55
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=99.93 E-value=3.8e-25 Score=184.79 Aligned_cols=137 Identities=42% Similarity=0.622 Sum_probs=124.1
Q ss_pred CCccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 031230 8 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 8 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l 87 (163)
.++++||+|+|+...++..++++||.||+++++++.++.++++++++.|+++|+ .|+++|..+|.++|.+++++|
T Consensus 20 ~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l 94 (480)
T cd07111 20 RSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE-----SWSALPGHVRARHLYRIARHI 94 (480)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHH
Confidence 456889999999765567899999999999999999999999999999999999 999999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 88 TERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 88 ~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+++++|+.++++|+|||+.++.. |+..+++.+++++++.....+. ++.|+|+|||++|+||
T Consensus 95 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~--------------~~~~~P~GVV~~I~Pw 157 (480)
T cd07111 95 QKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDTE--------------LAGWKPVGVVGQIVPW 157 (480)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------cccceecceEEEECCC
Confidence 999999999999999999999974 9999999999998876543221 2468999999999999
No 56
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=99.93 E-value=3.8e-25 Score=184.07 Aligned_cols=131 Identities=28% Similarity=0.478 Sum_probs=119.8
Q ss_pred CCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 031230 24 KKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCG 103 (163)
Q Consensus 24 ~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~G 103 (163)
.+.++++||+||+++++++.++.+++++|++.|+++|+ .|+.++..+|+++|.+++++|++|+++|+.+++.|+|
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 80 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR-----DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMG 80 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhC
Confidence 35788999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 104 KPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 104 kp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
||..++..|+..+++.++||+..+.++.+... . ...+...++.|+|+|||++|+||
T Consensus 81 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~P~GvV~~I~Pw 136 (462)
T PRK13968 81 KPINQARAEVAKSANLCDWYAEHGPAMLKAEP--T--LVENQQAVIEYRPLGTILAIMPW 136 (462)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc--c--cCCCceEEEEEeccceEEEEcCC
Confidence 99999999999999999999999887765421 1 12345678999999999999999
No 57
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.93 E-value=4.9e-25 Score=185.87 Aligned_cols=146 Identities=31% Similarity=0.392 Sum_probs=128.2
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
+...|.+.+ +.++..++++||+||+++++++.++.+|++.+++.|++||+ .|+++|..+|.++|.+++++|.+
T Consensus 19 ~~~~~~~~~--~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~~ 91 (524)
T PRK09407 19 LRRLTARVD--GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR-----AWAATPVRERAAVLLRFHDLVLE 91 (524)
T ss_pred HHHHHhhcC--CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHccCCHHHHHHHHHHHHHHHHH
Confidence 345677766 44678899999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++++|+.++++|+|||..++..|+..+++.++|+++++.++.+......... .....++.|+|+|||++|+||
T Consensus 92 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~P~ 164 (524)
T PRK09407 92 NREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALP-VLTKTTELRQPKGVVGVISPW 164 (524)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCC-CCceEEEEEecceEEEEEeCC
Confidence 9999999999999999999988999999999999999988776532111111 124678999999999999999
No 58
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.93 E-value=1.1e-24 Score=188.28 Aligned_cols=143 Identities=23% Similarity=0.281 Sum_probs=123.5
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHH-hhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQA-LSRNKGKDWSSASGAFRAKYLRAIAAKIT 88 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a-~~~~~~~~w~~~~~~~R~~~L~~~~~~l~ 88 (163)
+++||||+|+.+ ++..++++||.||+++++++.++ +|+++|++.|++| |+ .|+++|..+|+++|.+++++|+
T Consensus 5 ~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~-----~W~~~~~~eR~~~L~~~a~~l~ 77 (675)
T PRK11563 5 LQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP-----ALRALTFHERAAMLKALAKYLL 77 (675)
T ss_pred ccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh-----hhhcCCHHHHHHHHHHHHHHHH
Confidence 468999999976 45779999999999999999988 6999999999998 78 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhc--------cccccccCCCCCC-ceeEEEEecc-ceEE
Q 031230 89 ERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLD--------AKQKAPVSLPMEN-FKSYVLKEPI-GVVG 158 (163)
Q Consensus 89 ~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~--------~~~~~~~~~~~~~-~~~~~~r~P~-GVV~ 158 (163)
+|+++|+. ++.|+|||..++..|+..+++.++||+.++.+.. ++. .+....+ ...++.++|+ |||+
T Consensus 78 ~~~~ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~p~~GVv~ 153 (675)
T PRK11563 78 ERKEELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEV---EPLSKGGTFAGRHILTPLEGVAV 153 (675)
T ss_pred HhHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCcc---ccccCCCcccceEEEeecCceEE
Confidence 99999998 5899999999999999999999999999886653 221 1111112 2357899997 9999
Q ss_pred EEccC
Q 031230 159 LITPW 163 (163)
Q Consensus 159 ~IsPw 163 (163)
+|+||
T Consensus 154 ~I~Pw 158 (675)
T PRK11563 154 HINAF 158 (675)
T ss_pred EECCC
Confidence 99999
No 59
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.93 E-value=1.3e-24 Score=180.74 Aligned_cols=131 Identities=32% Similarity=0.481 Sum_probs=118.0
Q ss_pred eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230 27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
++++||.||+++++++.++.+|++.+++.|++||+ .|+.++..+|.++|.+++++|++++++|++++++|+|||.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 77 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR-----DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTL 77 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH
Confidence 67899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++..||..+++.++||++.+.++.+..... .........++.|+|+|||++|+||
T Consensus 78 ~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GvV~~I~Pw 133 (457)
T PRK09406 78 ASAKAEALKCAKGFRYYAEHAEALLADEPAD-AAAVGASRAYVRYQPLGVVLAVMPW 133 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccc-ccCCCCceEEEEEecceeEEEECCc
Confidence 9998899999999999999998887543111 1111234678999999999999999
No 60
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=99.93 E-value=9.6e-25 Score=181.69 Aligned_cols=136 Identities=40% Similarity=0.704 Sum_probs=123.1
Q ss_pred EecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 031230 18 WREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL 97 (163)
Q Consensus 18 ~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~ 97 (163)
|+.+.+ .+++++||.||+++++++.++.++++.+++.|++||+ .|+.++..+|.++|.+++++|++++++|+++
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 74 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK-----EWSKLPAAERARILERFADLLEERRDELAEL 74 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH-----HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH-----hhhhhhhhhHHHHHHHHHHHHhhcccccccc
Confidence 666644 6799999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 98 ETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 98 ~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++.|+|||..++..|+..+++.++|++++++++.+.. .+.. .+...++.++|+|||++|+||
T Consensus 75 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~i~p~ 136 (462)
T PF00171_consen 75 IALETGKPIAEARGEVDRAIDFLRYYADAARKLAGEV---LPSD-PGSRNYTRREPLGVVLIITPW 136 (462)
T ss_dssp HHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEE---EEES-TTEEEEEEEEE-SEEEEEE-S
T ss_pred cccccccccccccchhhhhhhhhhhhhhcccceehhh---cccc-cccccccccccccceeecccc
Confidence 9999999999999999999999999999999977642 2332 678899999999999999998
No 61
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=99.92 E-value=1.1e-23 Score=175.81 Aligned_cols=143 Identities=26% Similarity=0.367 Sum_probs=124.0
Q ss_pred ccceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 10 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 10 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
.++||||+|+.. +..++++||+||+++++++.++.+|+++|++.|+++|+ . ++..+|+++|.+++++|++
T Consensus 4 ~~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~---~~~~~R~~~l~~~a~~l~~ 73 (472)
T TIGR03250 4 EALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----T---LTRYERSAILDRAAALLAA 73 (472)
T ss_pred CCceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----h---CCHHHHHHHHHHHHHHHHH
Confidence 368999999863 57799999999999999999999999999999988775 3 6899999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccC--CCCCCceeEEEEecc-ceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVS--LPMENFKSYVLKEPI-GVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~r~P~-GVV~~IsPw 163 (163)
++++|+.++++|+|||..++..|+..+++.++|+++.+.++.+... +.. ....+...++.|+|+ |||++|+||
T Consensus 74 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~ 149 (472)
T TIGR03250 74 RKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIF-SCDLTPHGKARKVFTQREPLLGVISAITPF 149 (472)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-ccccCCCCCCceEEEEEcCCCCEEEEEcCC
Confidence 9999999999999999999999999999999999999887765421 111 111244578999998 999999999
No 62
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=99.92 E-value=1.5e-25 Score=181.35 Aligned_cols=149 Identities=29% Similarity=0.511 Sum_probs=136.0
Q ss_pred cceeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
..||+|+++.+++++++..+||.|+++|++++.++..|++.|+.+|+.||..| .|++++..+|.+.|.++++++++|
T Consensus 423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g---~w~~~sar~rg~~~y~la~lme~h 499 (881)
T KOG2452|consen 423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENG---RWGKISARDRGRLMYRLADLMEQH 499 (881)
T ss_pred hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcC---cccccchhhhhhhhhhccchhhhc
Confidence 56999999999999999999999999999999999999999999999999987 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCC-ceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMEN-FKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.+.+++.|.-+..+. ..|...|+.+||+++|.+++.+.. .|+....++ ..+.+.++|+|||++|.||
T Consensus 500 ~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~t-ipi~~arpn~nl~lt~~epigv~g~i~pw 573 (881)
T KOG2452|consen 500 QEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGST-IPINQARPNRNLTLTRKEPVGVCGIIIPW 573 (881)
T ss_pred cchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCce-eccccCCCCCcceeeecCcceeEEEeccC
Confidence 99999999999999888886 599999999999999999999874 233322233 4589999999999999999
No 63
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=99.92 E-value=4.1e-24 Score=177.37 Aligned_cols=129 Identities=20% Similarity=0.306 Sum_probs=117.6
Q ss_pred eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230 27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
++++||.||+++++++.++.++++++++.|++||. .|+.++..+|.++|.+++++|++++++|+++++.|+|||+
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 75 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP-----AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTY 75 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 46899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++..|+..+++.+++++..+.++.+.. .+....+...++.|+|+|||++|+||
T Consensus 76 ~~a~~ev~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~P~ 129 (451)
T cd07150 76 GKAWFETTFTPELLRAAAGECRRVRGET---LPSDSPGTVSMSVRRPLGVVAGITPF 129 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEecccEEEEECCC
Confidence 9999999999999999999988776543 22222355678999999999999999
No 64
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=99.92 E-value=8.6e-24 Score=175.69 Aligned_cols=127 Identities=32% Similarity=0.571 Sum_probs=114.1
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||+||+++++++.++.+|+++|++.|+++|+.+ .|+. +..+|+++|.+++++|++|+++|+.+++.|+|||..+
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~---~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 76 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDET---DWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGE 76 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---ccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 47999999999999999999999999999999821 3998 8999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..||..+++.++||++++.+..+.. .+.. .+...++.|+|+|||++|+||
T Consensus 77 a~~Ev~~~i~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~P~Gvv~~I~P~ 127 (455)
T cd07120 77 ARFEISGAISELRYYAGLARTEAGRM---IEPE-PGSFSLVLREPMGVAGIIVPW 127 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceEEEEEecceeEEEECCC
Confidence 99999999999999999988876653 1111 345678999999999999999
No 65
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=99.92 E-value=8.1e-24 Score=175.89 Aligned_cols=131 Identities=34% Similarity=0.508 Sum_probs=116.3
Q ss_pred eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230 27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
++++||.||+++++++.++.+|++.+++.|++||+ .|+.+|.++|.++|.+++++|++|+++|+.+++.|+|||.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 75 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD-----VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPI 75 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 46899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhccccccccCC--CCCCceeEEEEeccceEEEEccC
Q 031230 107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSL--PMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++..|+..+++.++++++++..+.+.. .+... ...+...++.|+|+|||++|+||
T Consensus 76 ~~a~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~ 133 (456)
T cd07145 76 KQSRVEVERTIRLFKLAAEEAKVLRGET-IPVDAYEYNERRIAFTVREPIGVVGAITPF 133 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccCccccccCCceeEEEEecceeEEEECCC
Confidence 9999999999999999999887665542 11111 01244578899999999999999
No 66
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=99.91 E-value=1.1e-23 Score=175.00 Aligned_cols=130 Identities=65% Similarity=1.086 Sum_probs=116.2
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||.||+++++++.++.++++++++.|++||+ .|+.+|.++|.++|.+++++|++|+++|+.+++.|+|||..+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 75 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP-----RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDE 75 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..|+..+++.++++++.++++.+......+....+...++.|+|+|||++|+||
T Consensus 76 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~ 130 (456)
T cd07110 76 AAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPW 130 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCC
Confidence 9889999999999999999887532111122222355679999999999999999
No 67
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=99.91 E-value=2.2e-23 Score=173.28 Aligned_cols=128 Identities=39% Similarity=0.616 Sum_probs=113.9
Q ss_pred ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230 30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA 109 (163)
Q Consensus 30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a 109 (163)
+||+||+++++++.++.+|+++|++.|++||+.+ .|+++|.++|.++|.+++++|++|+++|+.++++|+|||..++
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKG---PWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQA 78 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCC---ccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 5999999999999999999999999999999822 4999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 110 VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 110 ~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
..|+..+++.+++++.+...+.+.. .+....+...++.|+|+|||++|+||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GvV~~I~p~ 129 (454)
T cd07118 79 RGEIEGAADLWRYAASLARTLHGDS---YNNLGDDMLGLVLREPIGVVGIITPW 129 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceeeEEeecceEEEEECCC
Confidence 9999999999999999877665542 11111345678999999999999999
No 68
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=99.91 E-value=2.9e-23 Score=172.84 Aligned_cols=132 Identities=34% Similarity=0.582 Sum_probs=118.7
Q ss_pred CeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 031230 25 KRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGK 104 (163)
Q Consensus 25 ~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gk 104 (163)
.+++++||.||+++++++.++.++++.+++.|++||+.+ .|+.+|..+|.++|.+++++|.+|+++|+.+++.|+||
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 78 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESG---VWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGK 78 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCC---ccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Confidence 468899999999999999999999999999999999721 49999999999999999999999999999999999999
Q ss_pred CHHHHHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 105 PLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 105 p~~~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|..++.. |+..+++.++|+++++.++.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 79 ~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GvV~~i~p~ 134 (462)
T cd07112 79 PISDALAVDVPSAANTFRWYAEAIDKVYGEV---APTG-PDALALITREPLGVVGAVVPW 134 (462)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcCce---ecCC-CCeEEEEEEeeeeeEEEECCC
Confidence 9999975 99999999999999998877653 1211 355678999999999999999
No 69
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=99.91 E-value=2.4e-23 Score=173.05 Aligned_cols=128 Identities=34% Similarity=0.488 Sum_probs=115.6
Q ss_pred ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230 30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA 109 (163)
Q Consensus 30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a 109 (163)
.||.||+++++++.++.+|++.+++.|++||+ .|+.+|..+|.++|.+++++|++|+++|++++++|+|||..++
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a 75 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR-----AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHA 75 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH
Confidence 48999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 110 VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 110 ~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
..|+..+++.++|+++++.++.+....+...+ .....++.|+|+|||++|+||
T Consensus 76 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~ 128 (454)
T cd07101 76 FEEVLDVAIVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPW 128 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCC
Confidence 88999999999999999988876542211112 234678999999999999999
No 70
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.91 E-value=3.7e-23 Score=184.65 Aligned_cols=140 Identities=30% Similarity=0.443 Sum_probs=124.4
Q ss_pred cceeCceEecCCCCCeeeeecCCCCC-eeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 11 QLFINGEWREPVLKKRIPIVNPTTEE-IVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 11 ~~~i~g~~~~~~~~~~~~v~~P~tg~-~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
+.+|+| ++..++++||+|++ ++++++.++.++++.|++.|++||+ .|+.+|..+|+++|.+++++|++
T Consensus 554 ~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~-----~W~~~~~~~Ra~iL~kaAdll~~ 622 (1038)
T PRK11904 554 GPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP-----AWSRTPVEERAAILERAADLLEA 622 (1038)
T ss_pred cceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHH
Confidence 345666 35678999999998 9999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++++|+.+++.|+|||+.++..||..++++++||+..+.++.+... ..+.+ .+..+++.++|+|||++|+||
T Consensus 623 ~~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~-~l~g~-~ge~n~~~~~P~GVv~~IsPw 694 (1038)
T PRK11904 623 NRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPE-KLPGP-TGESNELRLHGRGVFVCISPW 694 (1038)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-ccCCC-CCceeEEEEecceEEEEECCC
Confidence 9999999999999999999999999999999999999988765421 12222 356788999999999999999
No 71
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.91 E-value=3.8e-23 Score=171.88 Aligned_cols=130 Identities=27% Similarity=0.365 Sum_probs=115.8
Q ss_pred eeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCC-CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230 28 PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKD-WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 28 ~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~-w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
+++||.||+++++++.++.++++.|++.|++||. . |+.+|.++|.++|.+++++|++++++|+.+++.|+|||.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 76 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL-----DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPL 76 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 5789999999999999999999999999999999 7 567999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhccccccccC--CCCCCceeEEEEeccceEEEEccC
Q 031230 107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVS--LPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++..|+..+++.++++++++.++.+... +.. ....+...++.|+|+|||++|+||
T Consensus 77 ~~a~~ev~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~ 134 (455)
T cd07148 77 VDAKVEVTRAIDGVELAADELGQLGGREI-PMGLTPASAGRIAFTTREPIGVVVAISAF 134 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEecceEEEEECCC
Confidence 99999999999999999999988876531 111 111345678999999999999999
No 72
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=99.91 E-value=3.8e-23 Score=172.02 Aligned_cols=130 Identities=37% Similarity=0.582 Sum_probs=115.5
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS-SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE 107 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~-~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~ 107 (163)
++||+||+++++++.++.+|++++++.|++||. .|+ .+|..+|.++|.+++++|++++++|+.+++.|+|||..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 75 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD-----TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM 75 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 479999999999999999999999999999999 999 99999999999999999999999999999999999998
Q ss_pred HHHH-hHHHHHHHHHHHHHhhhhhccccccccCC-CCCCceeEEEEeccceEEEEccC
Q 031230 108 EAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSL-PMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 108 ~a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++.. |+..+++.++|+++++.++.++...+... ...+...++.|+|+|||++|+||
T Consensus 76 ~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~ 133 (459)
T cd07089 76 TARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPW 133 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCC
Confidence 7754 99999999999999998887664211110 11355678999999999999999
No 73
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=99.91 E-value=2.9e-23 Score=172.63 Aligned_cols=126 Identities=46% Similarity=0.756 Sum_probs=115.4
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||.||+++++++.++.++++++++.|+++|. .|+.++..+|.++|.+++++|.+++++|+.++++|+|||..+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 75 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK-----EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEE 75 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence 579999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..|+..+++.++|++++.+.+.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 76 a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVV~~I~p~ 126 (457)
T cd07090 76 ARVDIDSSADCLEYYAGLAPTLSGEH---VPLP-GGSFAYTRREPLGVCAGIGAW 126 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCee---eccC-CCceEEEEEeecceEEEECCC
Confidence 99999999999999999888765542 2222 255678999999999999999
No 74
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=99.91 E-value=3.5e-23 Score=171.79 Aligned_cols=127 Identities=35% Similarity=0.591 Sum_probs=115.5
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||.||+++++++.++.++++.+++.|++||+ .|+.+|.++|.++|.+++++|++++++|+.+++.|+|||..+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 75 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK-----TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKE 75 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..|+..+++.++|++....++.+.. .+....+...++.|+|+|||++|+||
T Consensus 76 a~~ev~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~ 127 (448)
T TIGR01780 76 AKGEILYAASFLEWFAEEAKRVYGDT---IPSPQSDKRLLVIKQPVGVCAAITPW 127 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc---ccCCCCCceeEEEEeeeeEEEEEcCC
Confidence 99999999999999999888776653 12222345567889999999999999
No 75
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=99.91 E-value=3.4e-23 Score=172.17 Aligned_cols=126 Identities=34% Similarity=0.642 Sum_probs=114.7
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||.||+++++++.++.+|++++++.|++||+ .|+.+|..+|.++|.+++++|++++++|+.++++|+|||..+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 75 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP-----EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSA 75 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHH
Confidence 579999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..|+..+++.++|+++....+.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 76 a~~ev~~~~~~l~~~a~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~p~ 126 (456)
T cd07107 76 MLGDVMVAAALLDYFAGLVTELKGET---IPVG-GRNLHYTLREPYGVVARIVAF 126 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcc---ccCC-CCceEEEEEecceEEEEECCc
Confidence 98999999999999998876665542 2222 244678999999999999999
No 76
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=99.91 E-value=3.7e-23 Score=171.78 Aligned_cols=132 Identities=29% Similarity=0.385 Sum_probs=116.8
Q ss_pred eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230 27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
++++||+||+++++++.++.++++++++.|++||+ .|+.++..+|.++|.+++++|++++++|++++++|+|||.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 75 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR-----PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPI 75 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 46899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhcccccc-ccCCCCCCceeEEEEeccceEEEEccC
Q 031230 107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKA-PVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++..|+..+++.++++++.+.++.+.... .......+...++.|+|+|||++|+||
T Consensus 76 ~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~ 133 (452)
T cd07147 76 KDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPF 133 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCC
Confidence 999999999999999999998777554210 011111345678899999999999999
No 77
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=99.91 E-value=4.4e-23 Score=171.42 Aligned_cols=126 Identities=40% Similarity=0.615 Sum_probs=115.4
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWS-SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE 107 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~-~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~ 107 (163)
++||+||+++++++.++.+|++++++.|++||+ .|. .+|.++|.++|.+++++|.+|+++|+.+++.|+|||..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~-----~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 75 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE-----SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLT 75 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH
Confidence 579999999999999999999999999999999 776 99999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 108 EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 108 ~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++..|+..+++.++|+++..+++.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 76 ~a~~ev~~~~~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~P~GVv~~I~P~ 127 (454)
T cd07109 76 QARADVEAAARYFEYYGGAADKLHGET---IPLG-PGYFVYTVREPHGVTGHIIPW 127 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcc---cccC-CCceEEEEEeeeeEEEEECCC
Confidence 999999999999999999988876653 2222 355789999999999999999
No 78
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=99.90 E-value=4.9e-23 Score=171.05 Aligned_cols=131 Identities=27% Similarity=0.447 Sum_probs=117.4
Q ss_pred eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230 27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
++++||+||+++++++.++.+|++++++.|++||. .|+.+|..+|.++|.+++++|++++++|++++++|+|||.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 75 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAE-----NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPI 75 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 36899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhccccccccCC--CCCCceeEEEEeccceEEEEccC
Q 031230 107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSL--PMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++..|+..+++.++++++++.++.+... +... ...+...++.|+|+|||++|+||
T Consensus 76 ~~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~ 133 (453)
T cd07094 76 KDARVEVDRAIDTLRLAAEEAERIRGEEI-PLDATQGSDNRLAWTIREPVGVVLAITPF 133 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccccCCCceEEEEEeccceEEEECCC
Confidence 99999999999999999999988866421 1111 11245678999999999999999
No 79
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=99.90 E-value=1.4e-22 Score=168.40 Aligned_cols=129 Identities=33% Similarity=0.477 Sum_probs=115.8
Q ss_pred ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230 30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA 109 (163)
Q Consensus 30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a 109 (163)
+||+||+++++++.++.++++++++.|+++|. .|++++..+|.++|.+++++|++++++|+.++++|+|||..++
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~ 75 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR-----AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADA 75 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 58999999999999999999999999999999 9999999999999999999999999999999999999999988
Q ss_pred HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 110 VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 110 ~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
..|+..+++.++|+++.+.++.+....+......+...++.++|+|||++|+||
T Consensus 76 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~ 129 (453)
T cd07099 76 GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPW 129 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCC
Confidence 889999999999999999888765322111112355678999999999999999
No 80
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=99.90 E-value=1e-22 Score=169.39 Aligned_cols=126 Identities=34% Similarity=0.662 Sum_probs=113.8
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-H
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL-E 107 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~-~ 107 (163)
++||.||++++.++.++.+|++++++.|+++|+ .|+.++..+|.++|.+++++|++++++|++++++|+|||. .
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 75 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP-----EWAATPARERGKLLARIADALEARSEELARLLALETGNALRT 75 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHH
Confidence 579999999999999999999999999999999 9999999999999999999999999999999999999997 6
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 108 EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 108 ~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++..|+..+++.+++++.....+.+.. .+.. .+...++.|+|+|||++|+||
T Consensus 76 ~a~~ev~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~I~p~ 127 (457)
T cd07108 76 QARPEAAVLADLFRYFGGLAGELKGET---LPFG-PDVLTYTVREPLGVVGAILPW 127 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCce---eccC-CCeeEEEEeecceEEEEECCC
Confidence 888899999999999999877665542 2222 345678999999999999999
No 81
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=99.90 E-value=1.7e-22 Score=167.77 Aligned_cols=126 Identities=26% Similarity=0.456 Sum_probs=115.5
Q ss_pred ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230 30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA 109 (163)
Q Consensus 30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a 109 (163)
+||+||+++++++.++.+|++.+++.|++||+ .|+.++..+|.++|.+++++|++++++|+.+++.|+|||..++
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~ 75 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK-----GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA 75 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH
Confidence 58999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 110 VWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 110 ~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
..|+..+++.+++++..+.++.+... .+.. .+...++.++|+|||++|+||
T Consensus 76 ~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~P~GVv~~i~p~ 126 (452)
T cd07102 76 GGEIRGMLERARYMISIAEEALADIR--VPEK-DGFERYIRREPLGVVLIIAPW 126 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcc--cCCC-CCeeEEEEEEeccEEEEEcCC
Confidence 99999999999999999988766532 1212 355678999999999999998
No 82
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=99.90 E-value=2.2e-22 Score=167.33 Aligned_cols=129 Identities=36% Similarity=0.593 Sum_probs=114.5
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||.||+++++++.++.++++.+++.|++||..+ .|+.+|.++|.++|.+++++|.+++++|+.++++|+|||..+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 77 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGG---AWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRE 77 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCC---chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 47999999999999999999999999999999721 499999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..|+..+++.+++++...+.+.+.. .+....+...++.|+|+|||++|+||
T Consensus 78 ~~~ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~ 129 (457)
T cd07114 78 TRAQVRYLAEWYRYYAGLADKIEGAV---IPVDKGDYLNFTRREPLGVVAAITPW 129 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCceEEEEEecceEEEEECCC
Confidence 99999999999999998877665442 12121345678999999999999999
No 83
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=99.89 E-value=2.6e-22 Score=166.57 Aligned_cols=127 Identities=39% Similarity=0.663 Sum_probs=115.9
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||.||+++++++.++.++++.+++.|+++|+ .|+.+|.++|.++|.+++++|.+++++|+.+++.|+|||..+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 75 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK-----TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAE 75 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..|+..+++.+++++..+.++.+.. .+....+...++.++|+|||++|+||
T Consensus 76 a~~ev~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~ 127 (451)
T cd07103 76 ARGEVDYAASFLEWFAEEARRIYGRT---IPSPAPGKRILVIKQPVGVVAAITPW 127 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc---cccCCCCcceEEEEeeceEEEEECCC
Confidence 99999999999999999888776653 22222355678999999999999998
No 84
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=99.89 E-value=2.2e-22 Score=167.16 Aligned_cols=125 Identities=40% Similarity=0.708 Sum_probs=114.4
Q ss_pred ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230 30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA 109 (163)
Q Consensus 30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a 109 (163)
+||.||+++++++.++.++++++++.|++||. .|+.+|.++|.++|.+++++|++|+++|+.++++|+|||..++
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~ 76 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFE-----AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAA 76 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 69999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 110 VW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 110 ~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.. |+..+++.+++++.+..+..+.. .+.. .+...++.|+|+|||++|+||
T Consensus 77 ~~~ev~~~i~~l~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~P~Gvv~~i~p~ 127 (453)
T cd07115 77 RRLDVPRAADTFRYYAGWADKIEGEV---IPVR-GPFLNYTVREPVGVVGAIVPW 127 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCce---ecCC-CCceEEEEecceeEEEEEcCC
Confidence 75 99999999999999887776542 1222 355678999999999999999
No 85
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.89 E-value=3.1e-22 Score=166.20 Aligned_cols=131 Identities=32% Similarity=0.537 Sum_probs=116.2
Q ss_pred eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230 27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
|+++||.||+++++++.++.++++.+++.|++||. .|+.+|..+|.++|.+++++|.+++++|+.++..|+|||.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 75 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK-----EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPI 75 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCH
Confidence 46899999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhccccccccCC-C-CCCceeEEEEeccceEEEEccC
Q 031230 107 EEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSL-P-MENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 107 ~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~-~-~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++..|+..+++.++++++.+..+.+... +... + ..+...++.|+|+|||++|+||
T Consensus 76 ~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~i~p~ 133 (453)
T cd07149 76 KDARKEVDRAIETLRLSAEEAKRLAGETI-PFDASPGGEGRIGFTIREPIGVVAAITPF 133 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccCCCCCeeEEEEeecceEEEEECCC
Confidence 99999999999999999998877765421 1110 1 1234568999999999999999
No 86
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=99.89 E-value=3.9e-22 Score=165.57 Aligned_cols=127 Identities=35% Similarity=0.567 Sum_probs=113.1
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|.+++++|.+++++|++++++|+|||..+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~ 75 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP-----SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHL 75 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHH
Confidence 579999999999999999999999999999999 999999999999999999999999999999999999999987
Q ss_pred HH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+. .|+..+++.+++++...+.+.+.. .+....+...++.|+|+|||++|+||
T Consensus 76 ~~~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~P~ 128 (450)
T cd07092 76 VRDDELPGAVDNFRFFAGAARTLEGPA---AGEYLPGHTSMIRREPIGVVAQIAPW 128 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcc---cCccCCCceeEEEEeccceEEEECCC
Confidence 75 599999999999998877665542 11111344678999999999999999
No 87
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=99.89 E-value=5.2e-22 Score=165.44 Aligned_cols=129 Identities=33% Similarity=0.449 Sum_probs=112.5
Q ss_pred ecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 031230 30 VNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA 109 (163)
Q Consensus 30 ~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a 109 (163)
+||.||+++++++.++.+|++.|++.|++||+ .|+++|..+|.++|.+++++|.+++++|+.+++.|+|||+.++
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 75 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR-----EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDA 75 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH-----HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 59999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 110 VW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 110 ~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.. |+..+++.++++++...........+......+...++.|+|+|||++|+||
T Consensus 76 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~ 130 (465)
T cd07098 76 SLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSW 130 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEccc
Confidence 64 9999999999999887765443211111101234568899999999999999
No 88
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=99.89 E-value=4.8e-22 Score=164.90 Aligned_cols=124 Identities=32% Similarity=0.529 Sum_probs=111.5
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|.+++++|.+|+++|+.+++.|+|||..+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 75 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP-----GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAE 75 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..|+..+++.++++++... .+.. ... ..+...++.|+|+|||++|+||
T Consensus 76 a~~ev~~~~~~l~~~~~~~~--~~~~---~~~-~~~~~~~~~~~P~GVv~~I~p~ 124 (446)
T cd07106 76 AQFEVGGAVAWLRYTASLDL--PDEV---IED-DDTRRVELRRKPLGVVAAIVPW 124 (446)
T ss_pred HHHHHHHHHHHHHHHHhhhh--cCcc---ccC-CCCceEEEEEEcceEEEEEcCC
Confidence 98899999999999998763 1221 111 1355679999999999999999
No 89
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.88 E-value=5.4e-22 Score=179.44 Aligned_cols=121 Identities=27% Similarity=0.429 Sum_probs=111.9
Q ss_pred CCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 031230 23 LKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETID 101 (163)
Q Consensus 23 ~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e 101 (163)
.+..++++||+| ++++++++.++.+|++.|++.|+++|+ .|+.+|..+|+++|.+++++|++|+++|+.+++.|
T Consensus 657 ~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~-----~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~E 731 (1318)
T PRK11809 657 AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP-----IWFATPPAERAAILERAADLMEAQMQTLMGLLVRE 731 (1318)
T ss_pred CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 356789999998 789999999999999999999999999 99999999999999999999999999999999999
Q ss_pred cCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 102 CGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 102 ~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+|||+.++..||..++++++||+..+..... .+.++|+|||++|+||
T Consensus 732 aGKt~~~A~~EV~eaidflryyA~~a~~~~~---------------~~~~~PlGVV~~IsPW 778 (1318)
T PRK11809 732 AGKTFSNAIAEVREAVDFLRYYAGQVRDDFD---------------NDTHRPLGPVVCISPW 778 (1318)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------CceeecccEEEEECCC
Confidence 9999999999999999999999988654211 1468999999999999
No 90
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=99.88 E-value=1.3e-21 Score=162.47 Aligned_cols=127 Identities=31% Similarity=0.416 Sum_probs=110.6
Q ss_pred eeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 031230 28 PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE 107 (163)
Q Consensus 28 ~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~ 107 (163)
+++||+||+++++++.++.++++.|+++|++ .|+.++..+|.++|.++++.|++++++|+.+++.|+|||..
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~--------~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 73 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAAS--------YRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLK 73 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHH--------HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 6889999999999999999999999998764 47779999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhhccccccccCC--CCCCceeEEEEeccceEEEEccC
Q 031230 108 EAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSL--PMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 108 ~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++..|+..+++.++|+++++.++.+... +... ...+...++.|+|+|||++|+||
T Consensus 74 ~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~ 130 (451)
T cd07146 74 DTRYEVGRAADVLRFAAAEALRDDGESF-SCDLTANGKARKIFTLREPLGVVLAITPF 130 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEeccceEEEEccC
Confidence 9999999999999999998877755421 1111 11345578999999999999999
No 91
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=99.88 E-value=1.7e-21 Score=161.98 Aligned_cols=126 Identities=41% Similarity=0.660 Sum_probs=113.5
Q ss_pred eecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 031230 29 IVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE 108 (163)
Q Consensus 29 v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~ 108 (163)
++||.||+++++++.++.++++++++.|++||. .|+.++.++|.++|.+++++|.+++++|+.+++.|+|||..+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 75 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP-----GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITL 75 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 469999999999999999999999999999999 999999999999999999999999999999999999999988
Q ss_pred HHH-hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 109 AVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 109 a~~-ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+.. |+..+++.++++++...+..+.. .+.. .+...++.++|+|||++|+||
T Consensus 76 ~~~~ev~~~i~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~P~GVv~~i~p~ 127 (455)
T cd07093 76 ARTRDIPRAAANFRFFADYILQLDGES---YPQD-GGALNYVLRQPVGVAGLITPW 127 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhCCcc---ccCC-CCceEEEEEEeeeEEEEECCC
Confidence 865 99999999999999887754432 2222 355678999999999999999
No 92
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.87 E-value=3.2e-21 Score=174.24 Aligned_cols=129 Identities=32% Similarity=0.501 Sum_probs=116.1
Q ss_pred ceeCceEecCCCCCeeeeecCCC-CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 12 LFINGEWREPVLKKRIPIVNPTT-EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 12 ~~i~g~~~~~~~~~~~~v~~P~t-g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
.+|+|+.. .+..++++||.| ++++++++.++.+++++|++.|++||+ .|+.+|..+|+++|.+++++|+++
T Consensus 557 ~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~-----~W~~~~~~~Ra~iL~raAdll~~~ 628 (1208)
T PRK11905 557 PLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP-----EWSATPAAERAAILERAADLMEAH 628 (1208)
T ss_pred ceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 34566543 245689999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 91 KSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 91 ~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|+.+++.|+||++.++..||..+++.++||+..+..+.+. ..++|+|||++|+||
T Consensus 629 ~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~~---------------~~~~P~GVv~~IsPw 686 (1208)
T PRK11905 629 MPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLNG---------------PGHKPLGPVVCISPW 686 (1208)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------------ceecCccEEEEEcCC
Confidence 9999999999999999999999999999999999987655321 356899999999999
No 93
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=99.86 E-value=9.5e-21 Score=157.04 Aligned_cols=120 Identities=25% Similarity=0.366 Sum_probs=108.4
Q ss_pred CCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHH
Q 031230 35 EEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDID 114 (163)
Q Consensus 35 g~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~ 114 (163)
|+++++++.++.++++++++.|++||+ .|+.+|..+|.++|.+++++|++|+++|++++++|+|||..++..|+.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~ 75 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR-----AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVG 75 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 578999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+++.+++++....+..+.. .+.. .+...++.|+|+|||++|+||
T Consensus 76 ~~i~~l~~~~~~~~~~~~~~---~~~~-~g~~~~~~~~P~Gvv~~i~p~ 120 (443)
T cd07152 76 AAIGELHEAAGLPTQPQGEI---LPSA-PGRLSLARRVPLGVVGVISPF 120 (443)
T ss_pred HHHHHHHHHHHhHHHhCCcc---cccc-CCceeEEEEecceEEEEECCC
Confidence 99999999998876554432 2212 355678999999999999999
No 94
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=99.86 E-value=8.8e-21 Score=158.34 Aligned_cols=115 Identities=22% Similarity=0.283 Sum_probs=101.1
Q ss_pred CCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHH
Q 031230 44 ATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEY 122 (163)
Q Consensus 44 ~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~ 122 (163)
-...|++.|+++|+++|+ .|+.++..+|.++|.+++++|++|+++|+.+++.|+|||..++.. ||..+++.++|
T Consensus 7 ~~~~~v~~av~~a~~af~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~ 81 (484)
T PLN02174 7 FGAADASILVTELRRSFD-----DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKL 81 (484)
T ss_pred cCHHHHHHHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999 999999999999999999999999999999999999999999976 99999999999
Q ss_pred HHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 123 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++++++++.++..........+...++.|+|+|||++|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 122 (484)
T PLN02174 82 ALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAW 122 (484)
T ss_pred HHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCC
Confidence 99999988874322222222344678999999999999999
No 95
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=99.85 E-value=1e-20 Score=155.64 Aligned_cols=129 Identities=31% Similarity=0.483 Sum_probs=115.7
Q ss_pred eeCceEecCCCCCeeeeecCCCC-CeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 031230 13 FINGEWREPVLKKRIPIVNPTTE-EIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERK 91 (163)
Q Consensus 13 ~i~g~~~~~~~~~~~~v~~P~tg-~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~ 91 (163)
.++|+.+. .+...+|+||++. .+++.+.+++.+|+++|++.|..+++ .|..+|..+|+.+|.+++|+|+.+.
T Consensus 117 ~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p-----~W~atp~~eRAaiL~raAdlme~~m 189 (769)
T COG4230 117 IVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP-----IWSATPPAERAAILERAADLMEAQM 189 (769)
T ss_pred ccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc-----ccccCCHHHHHHHHHHHHHHHHHHH
Confidence 46666654 4667899999986 58899999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 92 SELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 92 ~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+|..++.+|.||++.++..||..++|+||||+.+.+.-.+. ..+.|+|+|.+||||
T Consensus 190 ~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~---------------~~~~~~G~vVcISPW 246 (769)
T COG4230 190 PQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN---------------LTHRPLGPVVCISPW 246 (769)
T ss_pred HHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc---------------cccCCCCcEEEECCC
Confidence 999999999999999999999999999999999987753322 335789999999999
No 96
>PLN02203 aldehyde dehydrogenase
Probab=99.84 E-value=5e-20 Score=154.02 Aligned_cols=116 Identities=21% Similarity=0.227 Sum_probs=101.6
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHH
Q 031230 43 AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFE 121 (163)
Q Consensus 43 ~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~ 121 (163)
++..+|+++|++.|++||+ .|+.++..+|.++|.+++++|++|+++|+++++.|+|||..++. .||..+++.++
T Consensus 2 ~~~~~~v~~av~~a~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~ 76 (484)
T PLN02203 2 EAPGETLEGSVAELRETYE-----SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSAN 76 (484)
T ss_pred CCCHHHHHHHHHHHHHHHH-----hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999 99999999999999999999999999999999999999999996 59999999999
Q ss_pred HHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 122 YYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 122 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|+++.+.++.+......+....+...++.|+|+|||++|+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pw 118 (484)
T PLN02203 77 LALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSW 118 (484)
T ss_pred HHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCC
Confidence 999998888765211112211345678999999999999999
No 97
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=99.84 E-value=5.8e-20 Score=154.04 Aligned_cols=116 Identities=21% Similarity=0.238 Sum_probs=102.6
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHH
Q 031230 43 AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFE 121 (163)
Q Consensus 43 ~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~ 121 (163)
..+.++++++++.|+++|. .|+.++..+|.++|.+++++|++|+++|+++++.|+|||..++.. ||..+++.++
T Consensus 3 ~~~~~~i~~av~~a~~a~~-----~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~ 77 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFL-----TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIE 77 (493)
T ss_pred CCCHHHHHHHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999 999999999999999999999999999999999999999999975 9999999999
Q ss_pred HHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 122 YYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 122 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++++++++.+......+........++.|+|+|||++|+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~Pw 119 (493)
T PTZ00381 78 HLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAW 119 (493)
T ss_pred HHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCC
Confidence 999999998766432222211234678999999999999999
No 98
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=99.83 E-value=1.2e-19 Score=153.22 Aligned_cols=128 Identities=19% Similarity=0.138 Sum_probs=106.9
Q ss_pred eeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 031230 28 PIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE 107 (163)
Q Consensus 28 ~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~ 107 (163)
.=+||+|++++++++.++. +.++++|++||+ .|++++..+|.++|.+++++|++|+++|+.++++|+|||+.
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~-----~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~ 139 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP-----GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFM 139 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH
Confidence 3479999999999999996 899999999999 99999999999999999999999999999999999999998
Q ss_pred HHHH-----hHHHHHHHHHHHHHhhhhhccccccccCCCC---CCceeEEEEeccceEEEEccC
Q 031230 108 EAVW-----DIDDVAGCFEYYADLAEGLDAKQKAPVSLPM---ENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 108 ~a~~-----ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~---~~~~~~~~r~P~GVV~~IsPw 163 (163)
++.. ++...++.++|++....++.+......+... .....++.|+|+|||++|+||
T Consensus 140 ~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~Pw 203 (551)
T TIGR02288 140 MAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCS 203 (551)
T ss_pred HHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCc
Confidence 8742 7888999999999988777654210001110 112234589999999999999
No 99
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=99.83 E-value=1.7e-19 Score=149.32 Aligned_cols=115 Identities=17% Similarity=0.254 Sum_probs=99.5
Q ss_pred CCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHH
Q 031230 44 ATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEY 122 (163)
Q Consensus 44 ~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~ 122 (163)
.+.+|+++|+++|++||+ .|+.++..+|.++|.++++.|++|+++|+.+++.|+|||..++.. ||..+++.++|
T Consensus 2 ~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~ 76 (436)
T cd07135 2 TPLDEIDSIHSRLRATFR-----SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILH 76 (436)
T ss_pred CCHHHHHHHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHH
Confidence 578999999999999999 999999999999999999999999999999999999999999975 99999999999
Q ss_pred HHHhhhhhcccccccc-CCCCCCceeEEEEeccceEEEEccC
Q 031230 123 YADLAEGLDAKQKAPV-SLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 123 ~a~~~~~~~~~~~~~~-~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|+..+.++.+...... .....+...++.|+|+|||++|+||
T Consensus 77 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~ 118 (436)
T cd07135 77 MLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPW 118 (436)
T ss_pred HHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCC
Confidence 9999887654321111 0111244578999999999999999
No 100
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=99.83 E-value=1.6e-19 Score=152.60 Aligned_cols=135 Identities=19% Similarity=0.103 Sum_probs=112.1
Q ss_pred CCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 031230 21 PVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETI 100 (163)
Q Consensus 21 ~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~ 100 (163)
+.++...+++||+|++.+++++.+ |++.+++.|++||+ .|++++..+|.++|.+++++|.+++++|+.++++
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~-----~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~ 132 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP-----GWRDAGARARAGVCLEILQRLNARSFEMAHAVMH 132 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 445678899999999999899888 99999999999999 9999999999999999999999999999999999
Q ss_pred HcCCCHHHHHH-----hHHHHHHHHHHHHHhhhhhccccccccCCC---CCCceeEEEEeccceEEEEccC
Q 031230 101 DCGKPLEEAVW-----DIDDVAGCFEYYADLAEGLDAKQKAPVSLP---MENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 101 e~Gkp~~~a~~-----ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|+||++.++.. |++.+++.++|+++...++.+......+.. .......+.++|+|||++|+||
T Consensus 133 e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~ 203 (549)
T cd07127 133 TTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCS 203 (549)
T ss_pred HHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCc
Confidence 99999987752 799999999999998877654321000000 0011224588999999999998
No 101
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=99.82 E-value=2.2e-19 Score=148.53 Aligned_cols=107 Identities=31% Similarity=0.440 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230 48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA 127 (163)
Q Consensus 48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~ 127 (163)
|++++++.|+++|+ .|+.+|.++|.++|.+++++|++|+++|+++++.|+|||..++..||..+++.++++++..
T Consensus 1 ~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~ 75 (431)
T cd07095 1 QVDAAVAAARAAFP-----GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAY 75 (431)
T ss_pred CHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 9999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++.+... . ...+...++.++|+|||++|+||
T Consensus 76 ~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~I~Pw 107 (431)
T cd07095 76 HERTGERA---T-PMAQGRAVLRHRPHGVMAVFGPF 107 (431)
T ss_pred HHhcCCcc---c-CCCCceEEEEEecceEEEEECCC
Confidence 88776532 1 11355689999999999999999
No 102
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=99.80 E-value=6.6e-19 Score=146.20 Aligned_cols=108 Identities=25% Similarity=0.301 Sum_probs=93.6
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhh
Q 031230 51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEG 129 (163)
Q Consensus 51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~ 129 (163)
+.+++|++||+ .|+.+|..+|+++|.+++++|++|+++|+.+++.|+|||+.++.. ||..+++.++|+++.+++
T Consensus 2 ~~v~~a~~a~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~ 76 (449)
T cd07136 2 SLVEKQRAFFK-----TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKK 76 (449)
T ss_pred hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999 999999999999999999999999999999999999999999974 999999999999999888
Q ss_pred hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+.+....+......+...++.|+|+|||++|+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 110 (449)
T cd07136 77 WMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPW 110 (449)
T ss_pred HhCCCccCCccccCCceeEEEEecCeEEEEECCC
Confidence 7655211111111245678999999999999999
No 103
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=99.80 E-value=8.8e-19 Score=144.92 Aligned_cols=108 Identities=28% Similarity=0.375 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230 48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA 127 (163)
Q Consensus 48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~ 127 (163)
|++++++.|++||+ .|+.++.++|.++|.+++++|++|+++|+++++.|+|||..++..|+..+++.++|+++..
T Consensus 1 ~v~~ai~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~ 75 (432)
T cd07105 1 DADQAVEAAAAAFP-----AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLI 75 (432)
T ss_pred CHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 9999999999999999999999999999999999999999888889999999999999998
Q ss_pred hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.++.+.. .+....+...++.|+|+|||++|+||
T Consensus 76 ~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~p~ 108 (432)
T cd07105 76 TQIIGGS---IPSDKPGTLAMVVKEPVGVVLGIAPW 108 (432)
T ss_pred HHhcCee---cccCCCCceeEEEEecceEEEEECCc
Confidence 8764432 12111345678999999999999999
No 104
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=99.80 E-value=3.6e-19 Score=141.40 Aligned_cols=136 Identities=26% Similarity=0.373 Sum_probs=123.6
Q ss_pred CCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 031230 23 LKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDC 102 (163)
Q Consensus 23 ~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~ 102 (163)
..++++.+.|+||+.++.++..++.||++.|..|++|++ .|...++..|++.|+.+.+.+-+|+|.+++..++|+
T Consensus 62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk-----tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDt 136 (583)
T KOG2454|consen 62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK-----TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDT 136 (583)
T ss_pred CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh-----hhhhccHHHHHHHHHHHHHHHhhchhheeeeeeccc
Confidence 445788999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHH-HhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 103 GKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 103 Gkp~~~a~-~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
||+..+|. +||..+.+.+.|...+..+++.+...+....+...-++++|+|+||+++|.||
T Consensus 137 GKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsW 198 (583)
T KOG2454|consen 137 GKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSW 198 (583)
T ss_pred CchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeec
Confidence 99999975 59999999999999999999988655433333345579999999999999999
No 105
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=99.80 E-value=7.3e-19 Score=145.29 Aligned_cols=106 Identities=42% Similarity=0.576 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhh
Q 031230 49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE 128 (163)
Q Consensus 49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~ 128 (163)
++.|++.|++||. .|+.+|.++|.++|.+++++|++++++|+.++++|+|||..++..|+..+++.++|++..++
T Consensus 1 v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~ 75 (429)
T cd07100 1 IEAALDRAHAAFL-----AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAE 75 (429)
T ss_pred CHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++.+.... +. .+...++.|+|+|||++|+||
T Consensus 76 ~~~~~~~~--~~--~~~~~~~~~~P~GvV~~I~P~ 106 (429)
T cd07100 76 AFLADEPI--ET--DAGKAYVRYEPLGVVLGIMPW 106 (429)
T ss_pred HhcCCeec--cC--CCceEEEEEEeeeEEEEEcCC
Confidence 88654321 11 244678999999999999999
No 106
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=99.79 E-value=2.7e-18 Score=141.99 Aligned_cols=109 Identities=20% Similarity=0.298 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhh
Q 031230 50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAE 128 (163)
Q Consensus 50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~ 128 (163)
.++++.|++||. .|+.++..+|.++|++++++|++++++|+.+++.|+|||..++.. |+..+++.++++++.+.
T Consensus 2 ~~a~~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~ 76 (432)
T cd07137 2 PRLVRELRETFR-----SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELK 76 (432)
T ss_pred hHHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999 999999999999999999999999999999999999999999975 99999999999999987
Q ss_pred hhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++.+......+........++.|+|+|||++|+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~ 111 (432)
T cd07137 77 KWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAW 111 (432)
T ss_pred HHhCCcccCCCcccCCceeEEEEecCcEEEEEcCC
Confidence 76554211111111234568899999999999999
No 107
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=99.78 E-value=3.4e-18 Score=141.81 Aligned_cols=108 Identities=29% Similarity=0.303 Sum_probs=92.9
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhh
Q 031230 51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129 (163)
Q Consensus 51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~ 129 (163)
+|+++|++||+ .|+.+|..+|.++|.++++.|++|+++|+.+++.|+|||..++. .||..+++.++++++++.+
T Consensus 2 ~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~ 76 (443)
T cd07132 2 EAVRRAREAFS-----SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPE 76 (443)
T ss_pred hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999 99999999999999999999999999999999999999999996 5999999999999999988
Q ss_pred hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+.+...............++.|+|+|||++|+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~ 110 (443)
T cd07132 77 WMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAW 110 (443)
T ss_pred HhCCccCCCccccCCCceEEEEecccEEEEEcCC
Confidence 7654311111111234578999999999999999
No 108
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=99.78 E-value=2.7e-18 Score=141.81 Aligned_cols=108 Identities=27% Similarity=0.410 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230 48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA 127 (163)
Q Consensus 48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~ 127 (163)
|++++++.|++||+ .|+.++..+|.++|.+++++|.+++++|+++++.|+|||..++..|+..+++.+++++.+.
T Consensus 1 ~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~ 75 (431)
T cd07104 1 DVDRAYAAAAAAQK-----AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLP 75 (431)
T ss_pred CHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 9999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+..+.. .+....+...++.++|+|||++|+||
T Consensus 76 ~~~~~~~---~~~~~~g~~~~~~~~P~GVv~~i~p~ 108 (431)
T cd07104 76 RRPEGEI---LPSDVPGKESMVRRVPLGVVGVISPF 108 (431)
T ss_pred HHhcCcc---ccCCCCCceeEEEEeeeeeEEEECCC
Confidence 7665542 22222355678999999999999999
No 109
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=99.77 E-value=8.8e-18 Score=138.78 Aligned_cols=108 Identities=30% Similarity=0.391 Sum_probs=91.9
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhh
Q 031230 51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129 (163)
Q Consensus 51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~ 129 (163)
++++.|++||. .|+.+|..+|.++|.+++++|++++++|+.+++.|+|||..++. .|+..+++.+++++..+..
T Consensus 2 ~~v~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~ 76 (426)
T cd07087 2 ELVARLRETFL-----TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKK 76 (426)
T ss_pred hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999 99999999999999999999999999999999999999988776 4999999999999998887
Q ss_pred hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+.+...........+...++.|+|+|||++|+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 110 (426)
T cd07087 77 WMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPW 110 (426)
T ss_pred HhCCcccCCccccCCCceEEEEecCcEEEEEcCC
Confidence 7554211111111244678999999999999999
No 110
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=99.76 E-value=1.4e-17 Score=137.75 Aligned_cols=108 Identities=21% Similarity=0.216 Sum_probs=92.6
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HhHHHHHHHHHHHHHhhhh
Q 031230 51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEG 129 (163)
Q Consensus 51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~~~~ 129 (163)
+++++|++||+ .|+.+|..+|+++|.+++++|++|+++|+.+++.|+|||..++. .|+..+++.+++++..+..
T Consensus 2 ~~~~~a~~a~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~ 76 (433)
T cd07134 2 RVFAAQQAHAL-----ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKK 76 (433)
T ss_pred hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999 99999999999999999999999999999999999999999997 5999999999999998776
Q ss_pred hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+.+....+.+....+...++.|+|+|||++|+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 110 (433)
T cd07134 77 WMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPW 110 (433)
T ss_pred HhCCcccCCccccCCCceEEEEecCCEEEEEcCC
Confidence 5543211112222345678999999999999999
No 111
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=99.75 E-value=2.3e-17 Score=136.61 Aligned_cols=108 Identities=21% Similarity=0.246 Sum_probs=91.0
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-HHHHH-HhHHHHHHHHHHHHHhhh
Q 031230 51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAV-WDIDDVAGCFEYYADLAE 128 (163)
Q Consensus 51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp-~~~a~-~ev~~~i~~l~~~a~~~~ 128 (163)
+.++.|++||+ .|+.+|..+|.++|++++++|++|+++|+.++++|+||+ ..++. .|+..+++.++|+++.+.
T Consensus 2 ~~~~~a~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~ 76 (434)
T cd07133 2 ALLERQKAAFL-----ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLK 76 (434)
T ss_pred hHHHHHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999 999999999999999999999999999999999999985 66775 599999999999999988
Q ss_pred hhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 129 GLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++.+......+....+...++.|+|+|||++|+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pw 111 (434)
T cd07133 77 KWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPW 111 (434)
T ss_pred HHhCCcccCCccccCCCceEEEEecccEEEEEcCC
Confidence 77665321111111244578999999999999999
No 112
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=99.72 E-value=3.3e-17 Score=135.53 Aligned_cols=103 Identities=20% Similarity=0.223 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHH-HHHHHHHh
Q 031230 49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAG-CFEYYADL 126 (163)
Q Consensus 49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~-~l~~~a~~ 126 (163)
|+.|++.|++||. .|+++|..+|.++|.+++++|++++++|+++++.|+|||+.++.. |+..+++ .+++++..
T Consensus 1 ~~~av~~A~~A~~-----~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~ 75 (436)
T cd07122 1 VDELVERARKAQR-----EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM 75 (436)
T ss_pred ChHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 4689999999999 999999999999999999999999999999999999999999986 8888888 78888863
Q ss_pred hhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..+.. ... .+...++.|+|+|||++|+||
T Consensus 76 --~~~g~~----~~~-~~~~~~~~~~P~GVv~~I~pw 105 (436)
T cd07122 76 --KTVGVI----EED-EEKGIVEIAEPVGVIAALIPS 105 (436)
T ss_pred --cceeee----ccC-CCCCeEEEeecccEEEEEeCC
Confidence 232221 111 244578999999999999999
No 113
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=99.72 E-value=4.5e-17 Score=134.87 Aligned_cols=103 Identities=28% Similarity=0.298 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHH--HHHHHHHh
Q 031230 49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAG--CFEYYADL 126 (163)
Q Consensus 49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~--~l~~~a~~ 126 (163)
+++|++.|++||+ .|+.+|..+|.++|.+++++|++|+++|+.+++.|+|||+.++..++..++. .+++++..
T Consensus 1 ~~~Ai~~A~~A~~-----~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~ 75 (439)
T cd07081 1 LDDAVAAAKVAQQ-----GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE 75 (439)
T ss_pred CHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc
Confidence 4689999999999 9999999999999999999999999999999999999999999876665554 23443322
Q ss_pred hhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
. .+.. .+.. .+...++.|+|+|||++|+||
T Consensus 76 ~---~~~~---~~~~-~~~~~~~~~~P~GVV~~I~Pw 105 (439)
T cd07081 76 K---TCGV---LTGD-ENGGTLIIAEPIGVVASITPS 105 (439)
T ss_pred c---cCce---ecCC-CCCceEEEEecceEEEEECCC
Confidence 1 1111 1111 234568999999999999999
No 114
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=99.72 E-value=5.1e-17 Score=134.80 Aligned_cols=107 Identities=17% Similarity=0.020 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhh
Q 031230 50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129 (163)
Q Consensus 50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~ 129 (163)
+.|++.|++||. .|+++|..+|+++|.+++++|++|+++|+.+++.|+|||. ++..|+..+++.+++|+..+..
T Consensus 2 ~~av~~A~~A~~-----~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~ 75 (442)
T cd07084 2 ERALLAADISTK-----AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYS 75 (442)
T ss_pred hHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHh
Confidence 578999999999 9999999999999999999999999999999999999999 6667999999999999998865
Q ss_pred hc--cccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 130 LD--AKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 130 ~~--~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+. +... ...........++.++|+|||++|+||
T Consensus 76 ~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~I~p~ 110 (442)
T cd07084 76 YRIPHEPG-NHLGQGLKQQSHGYRWPYGPVLVIGAF 110 (442)
T ss_pred cccccccc-ccCCCCccccceEEeecceeEEEEcCC
Confidence 42 2110 011111134578999999999999999
No 115
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=99.72 E-value=8.8e-17 Score=133.80 Aligned_cols=110 Identities=25% Similarity=0.305 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhh
Q 031230 49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE 128 (163)
Q Consensus 49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~ 128 (163)
+++|++.|+++|+ .|+.+|..+|.++|.+++++|++++++|+.+++.|+|||..++..|+..+++.+++++..+.
T Consensus 1 v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~ 75 (454)
T cd07129 1 VDAAAAAAAAAFE-----SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVR 75 (454)
T ss_pred ChHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999 99999999999999999999999999999999999999999998899999999999999876
Q ss_pred hhc--cccccc-cC--CCCCCceeEEEEeccceEEEEccC
Q 031230 129 GLD--AKQKAP-VS--LPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 129 ~~~--~~~~~~-~~--~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+.. +..... .+ ....+...++.|+|+|||++|+||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~ 115 (454)
T cd07129 76 EGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGAS 115 (454)
T ss_pred hcCCccccccccccccCCCCCccceEEeeccceEEEECCC
Confidence 432 221000 00 001123457899999999999999
No 116
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=99.71 E-value=2.7e-16 Score=126.58 Aligned_cols=147 Identities=22% Similarity=0.246 Sum_probs=127.9
Q ss_pred CCCccceeCceEecCCCCCeeeeecCCCC-CeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 031230 7 IPSRQLFINGEWREPVLKKRIPIVNPTTE-EIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAA 85 (163)
Q Consensus 7 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg-~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~ 85 (163)
..++++.|+|+.+.. ......++|.+. .+++.+..++..+|++||++|.+|++ .|..+|..+|.+|+.|+++
T Consensus 57 ~~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~-----~W~~~PiadR~aI~lkAAd 129 (561)
T KOG2455|consen 57 PLEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK-----TWELVPIADRLAIFLKAAD 129 (561)
T ss_pred ceeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC-----ccccCcHHHHHHHHHHHHH
Confidence 446799999999875 345677889875 68999999999999999999999999 9999999999999999999
Q ss_pred HHH-HhHHHHHHHHHHHcCCCHHHHHHh-HHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEecc-ceEEEEcc
Q 031230 86 KIT-ERKSELANLETIDCGKPLEEAVWD-IDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPI-GVVGLITP 162 (163)
Q Consensus 86 ~l~-~~~~~la~~~~~e~Gkp~~~a~~e-v~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~-GVV~~IsP 162 (163)
++. +.+-+|-...+.-.||...+|..+ +...|+++|++++.+..+.+.+. ... ..+.....+++|+ |-|.+|+|
T Consensus 130 listkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qp--i~~-~~~t~ns~~yRpleGFVaAisP 206 (561)
T KOG2455|consen 130 LISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQP--ISQ-TKGTWNSMEYRPLEGFVAAISP 206 (561)
T ss_pred HhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCC--ccc-cCCCCcceeeccccceeEEecc
Confidence 999 888888888999999999999875 88999999999999999887752 221 3566667888887 99999999
Q ss_pred C
Q 031230 163 W 163 (163)
Q Consensus 163 w 163 (163)
|
T Consensus 207 F 207 (561)
T KOG2455|consen 207 F 207 (561)
T ss_pred c
Confidence 7
No 117
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=99.69 E-value=2.9e-16 Score=136.66 Aligned_cols=110 Identities=18% Similarity=0.161 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CCHHHH----HHhHH
Q 031230 47 EDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLE------TIDCG--KPLEEA----VWDID 114 (163)
Q Consensus 47 ~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~------~~e~G--kp~~~a----~~ev~ 114 (163)
++++.++++|++||+ .|+.+|..+|.++|.++++.|++|+++|+.++ ++|+| ||+.++ ..|+.
T Consensus 294 ~~~~~~~~aA~~A~~-----~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~ 368 (718)
T PLN02418 294 VGAREMAVAARESSR-----KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIA 368 (718)
T ss_pred HHHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHH
Confidence 359999999999999 99999999999999999999999999999996 77999 888776 35999
Q ss_pred HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+++.++||+.. .+..+......... .+...++.|+|+|||++|+||
T Consensus 369 ~~~~~~~~~a~~-~~~~g~~~~~~~~~-~~~~~~~~r~PlGVV~~I~Pw 415 (718)
T PLN02418 369 SLAASIRQLADM-EDPIGRVLKRTEVA-DGLVLEKTSCPLGVLLIIFES 415 (718)
T ss_pred HHHHHHHHHhcC-ccccCccccccccC-CCceEEEEEEeeeEEEEEeCC
Confidence 999999999998 33444321000011 244478999999999999999
No 118
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=99.69 E-value=2.5e-16 Score=130.19 Aligned_cols=105 Identities=26% Similarity=0.261 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHH
Q 031230 46 AEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYAD 125 (163)
Q Consensus 46 ~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~ 125 (163)
-+|++.|++.|++||+ .|+.++..+|.++|.+++++|++|+++|+++++.|+|||..++. ++.+++++.
T Consensus 3 ~~~v~~av~~A~~A~~-----~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~ 71 (429)
T cd07121 3 FATVDDAVAAAKAAQK-----QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAE 71 (429)
T ss_pred hhhHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHH
Confidence 4789999999999999 99999999999999999999999999999999999999987764 455666665
Q ss_pred hhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 126 LAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
........ .+......+...++.|+|+|||++|+||
T Consensus 72 ~~~~~~~~--~~~~~~~~~~~~~~~~~PlGVV~~I~Pw 107 (429)
T cd07121 72 KTPGTEDL--TTTAWSGDNGLTLVEYAPFGVIGAITPS 107 (429)
T ss_pred hcCccccc--ccccccCCCcceEEEEcccceEEEEccC
Confidence 33211100 0010111233568899999999999999
No 119
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=99.68 E-value=1.1e-16 Score=125.36 Aligned_cols=141 Identities=22% Similarity=0.435 Sum_probs=127.7
Q ss_pred eeCceEecCCCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230 13 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS 92 (163)
Q Consensus 13 ~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~ 92 (163)
..+|+|.. ++..++..+|++.++|+++..++.+|.+.+++.|++|++ .|-..|...|.++.+.+-|.|+...+
T Consensus 23 vy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k-----iw~~vpapkrgeivrqigdalr~klq 95 (507)
T KOG2453|consen 23 VYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK-----IWCEVPAPKRGEIVRQIGDALRTKLQ 95 (507)
T ss_pred eeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH-----HHhcCCCCccchHHHHHHHHHHHHHH
Confidence 45668954 678899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 93 ELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 93 ~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.|-.++++|+||-+.+...||...++.++|...+.+.+.+.. .|...++....-+..|+|+|++|+.|
T Consensus 96 ~lg~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i---~pserpghalleqwnplg~vgvitaf 163 (507)
T KOG2453|consen 96 NLGKLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKI---FPSERPGHALLEQWNPLGVVGVITAF 163 (507)
T ss_pred HHhhhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcc---cCCCCCchhHHHhcCCcceEEEEEec
Confidence 999999999999999999999999999999999999998885 44443455566788999999999865
No 120
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=99.67 E-value=2.1e-16 Score=129.40 Aligned_cols=101 Identities=18% Similarity=0.126 Sum_probs=84.3
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCH------HHHHHhHHHHHHHHHHH
Q 031230 56 ARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL------ETIDCGKPL------EEAVWDIDDVAGCFEYY 123 (163)
Q Consensus 56 a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~------~~~e~Gkp~------~~a~~ev~~~i~~l~~~ 123 (163)
|++||. .|+++|..+|.++|.+++++|++|+++|+.+ ++.|+|||. .++..|+..+++.++++
T Consensus 1 a~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~ 75 (398)
T TIGR00407 1 AKQAAN-----ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDV 75 (398)
T ss_pred ChhHHH-----HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 578999 9999999999999999999999999999999 999999994 34567999999999999
Q ss_pred HHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 124 ADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 124 a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+..++.+ +.. .+......+...++.|+|+|||++|+||
T Consensus 76 a~~a~~~-g~~-~~~~~~~~~~~~~~~~~PlGVV~~I~pw 113 (398)
T TIGR00407 76 IELADPV-GKV-IDGRELDSGLTLERVRVPLGVLGVIYEA 113 (398)
T ss_pred hcCCCCC-ccc-ccceecCCCceEEEEEeCcEEEEEEeCC
Confidence 9988764 432 1111111355678999999999999999
No 121
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=99.67 E-value=6.4e-16 Score=128.88 Aligned_cols=108 Identities=25% Similarity=0.260 Sum_probs=85.1
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHH
Q 031230 43 AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEY 122 (163)
Q Consensus 43 ~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~ 122 (163)
....+|++++++.|++||. .|+.++..+|.++|.+++++|++|+++|+++++.|+|||..++.. +.+++
T Consensus 32 ~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~ 100 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQ-----RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVA 100 (465)
T ss_pred ccHHHHHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHH
Confidence 3567899999999999999 999999999999999999999999999999999999999988763 33556
Q ss_pred HHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 123 YADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 123 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++......... .......+...++.|+|+|||++|+||
T Consensus 101 ~~~~~~~~~~~~--~~~~~~~~~~~~v~~~P~GVV~~I~Pw 139 (465)
T PRK15398 101 AAEKTPGVEDLT--TEALTGDNGLTLIEYAPFGVIGAVTPS 139 (465)
T ss_pred HHHHhccccccc--cCcccCCCceeEEEecccEEEEEeeCC
Confidence 665542111110 001111234578999999999999999
No 122
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=99.67 E-value=7.7e-16 Score=136.70 Aligned_cols=113 Identities=18% Similarity=0.238 Sum_probs=90.2
Q ss_pred EecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHH
Q 031230 40 DIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAG 118 (163)
Q Consensus 40 ~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~ 118 (163)
.....+.+|+++++++|++||+ .|+++|.++|.++|.+++++|++++++|+++++.|+|||..++.. ++..++.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~ 79 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQE-----EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASE 79 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH
Confidence 3456889999999999999999 999999999999999999999999999999999999999988875 5555555
Q ss_pred HHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 119 CFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 119 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+.+++. ..+..+. .... .....++.|+|+|||++|+||
T Consensus 80 ~~~~~~~-~~~~~g~----~~~~-~~~~~~~~~~P~GVv~~I~pw 118 (862)
T PRK13805 80 YIYNSYK-DEKTVGV----IEED-DEFGIIEIAEPVGVIAGITPT 118 (862)
T ss_pred HHHHHhc-CCCcccc----cCcC-CCCCeEEEeecceEEEEEeCC
Confidence 5544433 1222221 1111 244578999999999999999
No 123
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=99.66 E-value=5.6e-16 Score=127.73 Aligned_cols=109 Identities=20% Similarity=0.207 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HhH
Q 031230 46 AEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE----EAV--------WDI 113 (163)
Q Consensus 46 ~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~----~a~--------~ev 113 (163)
.+|++.+++.|++||. .|+.+|..+|.++|.+++++|++|+++|+.++..|+||+.. ++. .|+
T Consensus 3 ~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev 77 (417)
T PRK00197 3 MEYLEELGRRAKAASR-----KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARI 77 (417)
T ss_pred hhHHHHHHHHHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHH
Confidence 3689999999999999 99999999999999999999999999999999988877753 443 588
Q ss_pred HHHHHHHHHHHHhhhhhccccccccCC--CCCCceeEEEEeccceEEEEccC
Q 031230 114 DDVAGCFEYYADLAEGLDAKQKAPVSL--PMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 114 ~~~i~~l~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
..+++.+++++.+.+.. +.. .+. ...+...++.|+|+|||++|+||
T Consensus 78 ~~~~~~~~~~a~~~~~~-g~~---~~~~~~~~~~~~~~~~~PlGVv~~I~p~ 125 (417)
T PRK00197 78 EGIAEGLRQVAALPDPV-GEV---LDGWTLPNGLRIGRVRVPLGVIGVIYES 125 (417)
T ss_pred HHHHHHHHHHhhcCCCc-ccc---ccceecCCCceEEEEecCceEEEEEcCC
Confidence 99999999999877643 331 111 11233578999999999999998
No 124
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=99.65 E-value=2.5e-15 Score=126.02 Aligned_cols=110 Identities=17% Similarity=0.077 Sum_probs=89.1
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHH
Q 031230 43 AATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFE 121 (163)
Q Consensus 43 ~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~ 121 (163)
..+.++++.+++.|++||+ .|+.++.++|.++|.+++++|.+++++|++++..|+|||..+... +.......+.
T Consensus 4 ~~~~~~v~~av~~A~~A~~-----~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~ 78 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK-----KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVY 78 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence 4578899999999999999 999999999999999999999999999999999999999887654 3444666666
Q ss_pred HHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 122 YYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 122 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++...... +.. ... .+...+..|+|+|||++|+||
T Consensus 79 ~~~~~~~~~-G~~----~~~-~~~~~~~~~~PlGVV~~I~P~ 114 (488)
T TIGR02518 79 DSIKDMKTI-GIL----SED-KEKKVIEIAVPVGVVAGLIPS 114 (488)
T ss_pred HHHhhCccc-cee----cCC-CCcceEEEEecceEEEEEccc
Confidence 666533322 321 111 345578899999999999999
No 125
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=99.63 E-value=4.2e-15 Score=122.76 Aligned_cols=106 Identities=44% Similarity=0.691 Sum_probs=94.5
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhh
Q 031230 50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129 (163)
Q Consensus 50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~ 129 (163)
+++++.|+++|. .|+.++.++|.++|.++++.|.+++++|+.+++.|+|||..++..|+..+++.+++++..+++
T Consensus 1 ~~av~~a~~a~~-----~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~ 75 (432)
T cd07078 1 DAAVAAARAAFK-----AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARR 75 (432)
T ss_pred CHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999999 999999999999999999999999999999999999999988888999999999999999888
Q ss_pred hccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 130 LDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+.+... .....+...++.++|+|||++|+||
T Consensus 76 ~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~ 106 (432)
T cd07078 76 LHGEVI---PSPDPGELAIVRREPLGVVGAITPW 106 (432)
T ss_pred hcCccc---cccCCCceEEEEEeecceEEEECCC
Confidence 876632 1112356688999999999999998
No 126
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=99.63 E-value=8.9e-15 Score=117.01 Aligned_cols=110 Identities=26% Similarity=0.302 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhh
Q 031230 49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLA 127 (163)
Q Consensus 49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~ 127 (163)
+.+.++.+|.+|. +.+..|.+.|.++|.++..++++|.++|.+++..|.+||..++.. |+...++.++|+..++
T Consensus 4 ~~~~v~~~R~~F~-----sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L 78 (477)
T KOG2456|consen 4 ISETVRRLRLAFS-----SGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENL 78 (477)
T ss_pred HHHHHHHHHHHHh-----cCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhh
Confidence 4566899999999 779999999999999999999999999999999999999999975 9999999999999999
Q ss_pred hhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 128 EGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
++|..+..++.+......+.++..+|+|||++|+||
T Consensus 79 ~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~w 114 (477)
T KOG2456|consen 79 PEWVKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPW 114 (477)
T ss_pred HHhccccccCcccccccCceeEEecCCceEEEEccC
Confidence 999988765544444467789999999999999999
No 127
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=99.61 E-value=8.2e-15 Score=118.76 Aligned_cols=101 Identities=45% Similarity=0.731 Sum_probs=90.3
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhcccc
Q 031230 55 AARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQ 134 (163)
Q Consensus 55 ~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~ 134 (163)
.|+++|. .|+.++.++|.++|.++++.|.+++++|+++++.|+|||..++..|+..+++.++++++.+.++.+..
T Consensus 2 ~a~~a~~-----~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~ 76 (367)
T cd06534 2 AARAAFK-----AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPE 76 (367)
T ss_pred hHHHHHH-----HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 5789999 99999999999999999999999999999999999999999999999999999999999998887632
Q ss_pred ccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 135 KAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 135 ~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+....+...++.++|+|||++|+||
T Consensus 77 ---~~~~~~~~~~~~~~~p~Gvv~~i~p~ 102 (367)
T cd06534 77 ---LPSPDPGGEAYVRREPLGVVGVITPW 102 (367)
T ss_pred ---ccccCCCceeEEEEEeeeEEEEECCC
Confidence 22222456688999999999999998
No 128
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=99.59 E-value=5.1e-15 Score=121.69 Aligned_cols=106 Identities=20% Similarity=0.184 Sum_probs=83.2
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HhHHHHHH
Q 031230 51 LAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLE----EAV--------WDIDDVAG 118 (163)
Q Consensus 51 ~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~----~a~--------~ev~~~i~ 118 (163)
..++.|+++|. .|+.+|.++|.++|.+++++|++|+++|+.+++.|+||+.. ++. .|+..+++
T Consensus 2 ~~~~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~ 76 (406)
T cd07079 2 ELAKRAKAASR-----ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAE 76 (406)
T ss_pred hHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHH
Confidence 46789999999 99999999999999999999999999999999777776643 332 48999999
Q ss_pred HHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 119 CFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 119 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
.+++++...+. .+.. .+......+...++.|+|+|||++|+||
T Consensus 77 ~~~~~a~~~~~-~g~~-~~~~~~~~~~~~~~~~~PlGVV~~I~p~ 119 (406)
T cd07079 77 GLRQVAALPDP-VGEV-LRGWTLPNGLQIEKVRVPLGVIGIIYES 119 (406)
T ss_pred HHHHHHhcCCC-Cccc-ccceeccCccceeEEecceEEEEEecCC
Confidence 99999987543 2331 0110001234568999999999999997
No 129
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=99.58 E-value=6.9e-15 Score=120.58 Aligned_cols=98 Identities=18% Similarity=0.177 Sum_probs=83.0
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-----------HhHHHHHHHHHHH
Q 031230 55 AARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-----------WDIDDVAGCFEYY 123 (163)
Q Consensus 55 ~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~-----------~ev~~~i~~l~~~ 123 (163)
+|++||+ .|+.+|..+|.++|.+++++|++|+++|++++..|+|||+.+.. .|+..+++.++++
T Consensus 2 ~A~~a~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~ 76 (397)
T cd07077 2 SAKNAQR-----TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGI 76 (397)
T ss_pred hHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 6889999 99999999999999999999999999999999999999965432 3899999999999
Q ss_pred HHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 124 ADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 124 a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+....+..+.. .+ .....++.|+|+|||++|+||
T Consensus 77 a~~~~~~~~~~---~~---~~~~~~~~~~P~Gvv~~i~p~ 110 (397)
T cd07077 77 TASVGHIQDVL---LP---DNGETYVRAFPIGVTMHILPS 110 (397)
T ss_pred HHhcCcccceE---ec---CCCceEEEEecceEEEEEeCC
Confidence 98765554432 11 133578999999999999999
No 130
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=99.52 E-value=1.4e-13 Score=120.00 Aligned_cols=105 Identities=19% Similarity=0.162 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH----------------
Q 031230 48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW---------------- 111 (163)
Q Consensus 48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~---------------- 111 (163)
++...+++|++||+ .|+.+|..+|.++|.+++++|++|+++|+ .|+||++.++..
T Consensus 287 ~~~~~~~~A~~A~~-----~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ 357 (715)
T TIGR01092 287 GERDMAVAARESSR-----MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPS 357 (715)
T ss_pred HHHHHHHHHHHHHH-----hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHH
Confidence 47888999999999 99999999999999999999999999997 488888876654
Q ss_pred hHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 112 DIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 112 ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
|+..+++.++++++. .+..+....+.... .+...++.|+|+|||++|+||
T Consensus 358 ei~~~~~~l~~~a~~-~~~~g~~~~~~~~~-~~~~~~~~~~P~GVV~~I~Pw 407 (715)
T TIGR01092 358 KISSLAISLRQLAAM-EDPIGRVLKRTRIA-DNLILEKTSVPIGVLLIVFES 407 (715)
T ss_pred HHHHHHHHHHHHhcC-CCcccccccccccC-CCceeEEEEeeceEEEEEeCC
Confidence 477788888888873 33222210000011 233467899999999999999
No 131
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=99.48 E-value=2.3e-13 Score=111.98 Aligned_cols=81 Identities=30% Similarity=0.393 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEE
Q 031230 80 LRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGL 159 (163)
Q Consensus 80 L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~ 159 (163)
|.+++++|++|+++|+++++.|+|||..++..||..+++.++|++.++..+.+.. .+....+...++.|+|+|||++
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~ 77 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEI---IQSDRPGENILLFKRALGVTTG 77 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc---cCCCCCCceeEEEEecccEEEE
Confidence 5789999999999999999999999999999999999999999999988776542 1111124467899999999999
Q ss_pred EccC
Q 031230 160 ITPW 163 (163)
Q Consensus 160 IsPw 163 (163)
|+||
T Consensus 78 i~p~ 81 (409)
T PRK10090 78 ILPW 81 (409)
T ss_pred ECCC
Confidence 9999
No 132
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=98.05 E-value=7e-05 Score=60.90 Aligned_cols=107 Identities=18% Similarity=0.215 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcCCCHHH------HHHhHH
Q 031230 47 EDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLE------TIDCGKPLEE------AVWDID 114 (163)
Q Consensus 47 ~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~------~~e~Gkp~~~------a~~ev~ 114 (163)
.++.+..+.|++|+. ....++..+|-+.|.++++.|++++++|..+- .++.|.+... ....+.
T Consensus 3 ~~~~~~~~~Ak~A~~-----~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~ 77 (417)
T COG0014 3 SELEELGKRAKAASR-----KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIE 77 (417)
T ss_pred hHHHHHHHHHHHHHH-----HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHH
Confidence 467778889999999 89999999999999999999999999997763 4445544211 112455
Q ss_pred HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEE
Q 031230 115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLI 160 (163)
Q Consensus 115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I 160 (163)
.+++-++..+...+-+..-. .......+...+-.|.|+||+++|
T Consensus 78 ~ma~gl~~Va~L~DPvGev~--~~~~~~nGL~i~~~rvPLGVigvI 121 (417)
T COG0014 78 AMADGLRQVAALPDPVGEVI--DGWTLPNGLQIYRVRVPLGVIGVI 121 (417)
T ss_pred HHHHHHHHHhcCCCchHhhh--ccccCCCCCEEEEEEccceEEEEE
Confidence 56666666666544332221 011111467789999999999998
No 133
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=97.48 E-value=0.0012 Score=52.58 Aligned_cols=103 Identities=24% Similarity=0.268 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHHH--------HhHH
Q 031230 49 VELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL------ETIDCGKPLEEAV--------WDID 114 (163)
Q Consensus 49 i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~------~~~e~Gkp~~~a~--------~ev~ 114 (163)
+++..+.||++++ ....++.++|.++|.+++++|+.+..+|..+ .+.|.|. .++. .-+.
T Consensus 2 ~e~~a~~aR~a~r-----~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL--~~sll~RL~l~~~K~~ 74 (433)
T KOG4165|consen 2 VEEMAENAREAGR-----ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGL--AESLLKRLDLSPGKIS 74 (433)
T ss_pred HHHHHHHHHHHhh-----HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCc--cHHHHHHhcCChHHHH
Confidence 3556778999999 8999999999999999999999998887654 3455663 2221 1233
Q ss_pred HHHHHHHHHHHhhhhhccccccccCCCCCCceeEEEEeccceEEEE
Q 031230 115 DVAGCFEYYADLAEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLI 160 (163)
Q Consensus 115 ~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I 160 (163)
.....++..+. .....|......... .+..-+-.-.|+||-++|
T Consensus 75 sl~~g~~~ia~-~edpvGRVl~~~~la-dgL~L~qvt~PiGvLLVI 118 (433)
T KOG4165|consen 75 SLAAGLRQIAE-LEDPVGRVLKKTRLA-DGLELEQVTVPIGVLLVI 118 (433)
T ss_pred HHHHHHHHHHh-cccchhhheeeeecc-CCceEEEeeccceEEEEE
Confidence 33344444444 222222211111222 455667788999999988
No 134
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=97.44 E-value=0.00032 Score=58.28 Aligned_cols=93 Identities=14% Similarity=0.031 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH---HHHHcCCCHHHHHHhHHHHHHHHHHHHHh
Q 031230 50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANL---ETIDCGKPLEEAVWDIDDVAGCFEYYADL 126 (163)
Q Consensus 50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~---~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~ 126 (163)
++.++..+++++ .|..-+...|...|.++...+..+.+.+... +.....|+..+...+- .+. ....
T Consensus 27 ~~iv~~l~~~~~-----~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~~~l~~-----el~-~~~~ 95 (422)
T cd07080 27 EEIVDFLDRAGK-----RLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLERILER-----ELG-SPGI 95 (422)
T ss_pred HHHHHHHHHHHH-----HhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHHHHHHH-----hcC-Cccc
Confidence 334444445555 5555555556666666655555555555555 4444444332222110 010 0111
Q ss_pred hhhhccccccccCCCCCCceeEEEEeccceEEEEccC
Q 031230 127 AEGLDAKQKAPVSLPMENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~IsPw 163 (163)
+++|.. .+...+++++|+|||+.|+||
T Consensus 96 Ld~w~~----------~~~~~~~~~~P~Gvv~~I~p~ 122 (422)
T cd07080 96 LDEWVP----------PGRGGYIRAQPRGLVVHIIAG 122 (422)
T ss_pred ccCCcc----------CCCCCeeEEcCCceEEEEccC
Confidence 111111 144568999999999999998
No 135
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=68.37 E-value=13 Score=22.20 Aligned_cols=36 Identities=31% Similarity=0.472 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230 46 AEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAK 86 (163)
Q Consensus 46 ~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~ 86 (163)
++|+..+++.--.|.. .|..++...|..++..+...
T Consensus 7 P~dl~~aL~~~p~a~~-----~f~~l~~~~rr~~i~wi~~A 42 (63)
T PF13376_consen 7 PEDLEAALEANPEAKE-----FFESLTPSYRREYIRWINSA 42 (63)
T ss_pred CHHHHHHHHCCHHHHH-----HHHHCCHHHHHHHHHHHHHc
Confidence 4688999988888888 89999999999998877654
No 136
>PF08776 VASP_tetra: VASP tetramerisation domain; InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=68.13 E-value=13 Score=20.38 Aligned_cols=28 Identities=11% Similarity=0.218 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 031230 76 RAKYLRAIAAKITERKSELANLETIDCG 103 (163)
Q Consensus 76 R~~~L~~~~~~l~~~~~~la~~~~~e~G 103 (163)
..++|.-+...|.+-+++|+.++..|..
T Consensus 9 KqEIL~EvrkEl~K~K~EIIeA~~~eL~ 36 (40)
T PF08776_consen 9 KQEILEEVRKELQKVKEEIIEAIRQELS 36 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888999999999999998887754
No 137
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=66.63 E-value=12 Score=21.86 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=28.1
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 031230 55 AARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSEL 94 (163)
Q Consensus 55 ~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l 94 (163)
.++.... .|+.++..+|..+..++.....+...++
T Consensus 31 i~~~~~~-----~W~~ls~~eK~~y~~~a~~~~~~y~~e~ 65 (66)
T cd01390 31 VTKILGE-----KWKELSEEEKKKYEEKAEKDKERYEKEM 65 (66)
T ss_pred HHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 4455555 7999999999999999988888777654
No 138
>cd00591 HU_IHF Integration host factor (IHF) and HU are small heterodimeric members of the DNABII protein family that bind and bend DNA, functioning as architectural factors in many cellular processes including transcription, site-specific recombination, and higher-order nucleoprotein complex assembly. The dimer subunits associate to form a compact globular core from which two beta ribbon arms (one from each subunit) protrude. The beta arms track and bind the DNA minor groove. Despite sequence and structural similarity, IHF and HU can be distinguished by their different DNA substrate preferences.
Probab=64.27 E-value=23 Score=22.22 Aligned_cols=39 Identities=21% Similarity=0.115 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE 128 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~ 128 (163)
++.+|+..++..+|.+..++..-++...+.+........
T Consensus 1 ~K~~l~~~ia~~~~~~~~~v~~vl~~~~~~i~~~L~~g~ 39 (87)
T cd00591 1 TKSELIEAIAEKTGLSKKDAEAAVDAFLDVITEALAKGE 39 (87)
T ss_pred CHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467899999999999999988888888887776665543
No 139
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=61.13 E-value=8.1 Score=22.23 Aligned_cols=21 Identities=33% Similarity=0.466 Sum_probs=18.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l 87 (163)
.|..++..+|.++|.++...+
T Consensus 29 ~W~~~s~~er~~i~~~l~~R~ 49 (51)
T PF06945_consen 29 DWKSMSDDERRAILARLRARR 49 (51)
T ss_pred HHhhCCHHHHHHHHHHHHHHh
Confidence 699999999999999887654
No 140
>smart00398 HMG high mobility group.
Probab=57.19 E-value=29 Score=20.31 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=25.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKITERKSELA 95 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~~~~~la 95 (163)
.|+.++..+|..+...+....+++..++.
T Consensus 39 ~W~~l~~~ek~~y~~~a~~~~~~y~~~~~ 67 (70)
T smart00398 39 RWKLLSEEEKAPYEEKAKKDKERYEEEMP 67 (70)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999888888877664
No 141
>PRK10753 transcriptional regulator HU subunit alpha; Provisional
Probab=55.30 E-value=43 Score=21.51 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA 127 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~ 127 (163)
++.+|+..++..+|.+..++..-|+...+.+.......
T Consensus 2 ~K~eli~~ia~~~~~s~~~~~~~v~~~~~~i~~~L~~g 39 (90)
T PRK10753 2 NKTQLIDVIADKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 46788999999999998888777777777775555443
No 142
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT). This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].
Probab=54.51 E-value=35 Score=26.86 Aligned_cols=46 Identities=17% Similarity=0.242 Sum_probs=40.2
Q ss_pred cCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230 42 PAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKS 92 (163)
Q Consensus 42 ~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~ 92 (163)
...+..+...+.+..+.-.+ .|+.-...||..++..+.+.|++...
T Consensus 4 ~~~~~~d~~kV~s~L~q~~R-----DWS~eg~~ER~~~~~~I~~~L~~~~p 49 (270)
T PF07942_consen 4 VHPSPSDMDKVRSTLKQFVR-----DWSSEGEEERDPCYSPILDELESLFP 49 (270)
T ss_pred ccCchhhHHHHHHHHHHHHh-----hCchhhHHHHHHHHHHHHHHHHHhhc
Confidence 45677888889898888888 99999999999999999999998754
No 143
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=54.31 E-value=28 Score=21.11 Aligned_cols=35 Identities=9% Similarity=0.064 Sum_probs=27.6
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 031230 55 AARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSEL 94 (163)
Q Consensus 55 ~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l 94 (163)
.++.... .|+.++.++|..+........+++..+.
T Consensus 32 isk~l~~-----~Wk~ls~~eK~~y~~~a~~~k~~y~~~~ 66 (72)
T cd01388 32 ISKILGD-----RWKALSNEEKQPYYEEAKKLKELHMKLY 66 (72)
T ss_pred HHHHHHH-----HHHcCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 3455555 7999999999999888888888777654
No 144
>smart00411 BHL bacterial (prokaryotic) histone like domain.
Probab=53.31 E-value=47 Score=20.90 Aligned_cols=37 Identities=19% Similarity=0.096 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADL 126 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~ 126 (163)
++++|+..++..+|.+..++..-++...+.+......
T Consensus 2 tk~eli~~ia~~~~~~~~~v~~vl~~l~~~i~~~L~~ 38 (90)
T smart00411 2 TKSELIDAIAEKAGLSKKDAKAAVDAFLEIITEALKK 38 (90)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4678999999999999888777666666666555544
No 145
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=52.77 E-value=25 Score=21.43 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=28.6
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 031230 54 DAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELAN 96 (163)
Q Consensus 54 ~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~ 96 (163)
+..+.+-. .|+.+|..+|..+-.++...=++...++..
T Consensus 34 e~~k~~~~-----~Wk~Ls~~EK~~Y~~~A~~~k~~y~~e~~~ 71 (73)
T PF09011_consen 34 EVMKEISE-----RWKSLSEEEKEPYEERAKEDKERYEREMKE 71 (73)
T ss_dssp HHHHHHHH-----HHHHS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44556666 799999999999999988877777666653
No 146
>TIGR03481 HpnM hopanoid biosynthesis associated membrane protein HpnM. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins are members of the pfam05494 family of putative transporters known as "toluene tolerance protein Ttg2D", although it is unlikely that the members included here have anything to do with toluene per-se.
Probab=51.70 E-value=15 Score=27.44 Aligned_cols=23 Identities=22% Similarity=0.395 Sum_probs=20.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
.|+..+.++|.++...|.++|..
T Consensus 77 ~W~~~s~~Qr~~F~~~F~~~l~~ 99 (198)
T TIGR03481 77 SWTSLSPEQRRRFIGAFRELSIA 99 (198)
T ss_pred hhhhCCHHHHHHHHHHHHHHHHH
Confidence 79999999999999999987764
No 147
>PF00216 Bac_DNA_binding: Bacterial DNA-binding protein; InterPro: IPR000119 Bacteria synthesise a set of small, usually basic proteins of about 90 residues that bind DNA and are known as histone-like proteins [, ]. Examples include the HU protein in Escherichia coli is a dimer of closely related alpha and beta chains and in other bacteria can be a dimer of identical chains. HU-type proteins have been found in a variety of eubacteria, cyanobacteria and archaebacteria, and are also encoded in the chloroplast genome of some algae []. The integration host factor (IHF), a dimer of closely related chains which seem to function in genetic recombination as well as in translational and transcriptional control [] is found in enterobacteria and viral proteins include the African Swine fever virus protein A104R (or LMW5-AR) []. The exact function of these proteins is not yet clear but they are capable of wrapping DNA and stabilising it from denaturation under extreme environmental conditions. The structure is known for one of these proteins []. The protein exists as a dimer and two "beta-arms" function as the non-specific binding site for bacterial DNA. ; GO: 0003677 DNA binding; PDB: 3C4I_B 2O97_A 1MUL_A 1P78_A 1P51_C 1P71_B 2HT0_A 1OWG_A 2IIF_A 1OUZ_A ....
Probab=51.66 E-value=58 Score=20.38 Aligned_cols=39 Identities=15% Similarity=0.061 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE 128 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~ 128 (163)
++.+|+..++..+|.+..++..-++...+.+........
T Consensus 2 tk~eli~~ia~~~~~s~~~v~~vl~~~~~~i~~~L~~g~ 40 (90)
T PF00216_consen 2 TKKELIKRIAEKTGLSKKDVEAVLDALFDVIKEALKEGE 40 (90)
T ss_dssp BHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 367899999999999888877767777776665555443
No 148
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=51.53 E-value=25 Score=20.77 Aligned_cols=30 Identities=17% Similarity=0.277 Sum_probs=26.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKITERKSELAN 96 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~~~~~la~ 96 (163)
.|..++.++|..+-..+.+....+..++..
T Consensus 38 ~W~~l~~~eK~~y~~~a~~~~~~y~~~~~~ 67 (69)
T PF00505_consen 38 MWKNLSEEEKAPYKEEAEEEKERYEKEMPE 67 (69)
T ss_dssp HHHCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999999999999988888877653
No 149
>TIGR00987 himA integration host factor, alpha subunit. This protein forms a site-specific DNA-binding heterodimer with the integration host factor beta subunit. It is closely related to the DNA-binding protein HU.
Probab=50.20 E-value=55 Score=21.14 Aligned_cols=39 Identities=15% Similarity=0.002 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE 128 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~ 128 (163)
++.+|+..++..+|.+..++..-++...+.+........
T Consensus 3 tk~eli~~ia~~~~~s~~~v~~vv~~~~~~i~~~L~~g~ 41 (96)
T TIGR00987 3 TKAEMSEYLFDELGLSKREAKELVELFFEEIRRALENGE 41 (96)
T ss_pred CHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 357889999999999998888777777777766555443
No 150
>PF05494 Tol_Tol_Ttg2: Toluene tolerance, Ttg2 ; InterPro: IPR008869 Toluene tolerance is mediated by increased cell membrane rigidity resulting from changes in fatty acid and phospholipid compositions, exclusion of toluene from the cell membrane, and removal of intracellular toluene by degradation []. Many proteins are involved in these processes. This family is a transporter which shows similarity to ABC transporters [].; PDB: 2QGU_A.
Probab=50.05 E-value=18 Score=26.00 Aligned_cols=24 Identities=25% Similarity=0.450 Sum_probs=20.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 67 DWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
.|+.++..+|.++...|.+.|...
T Consensus 51 ~w~~~s~~q~~~F~~~f~~~l~~~ 74 (170)
T PF05494_consen 51 YWRKASPAQRQRFVEAFKQLLVRT 74 (170)
T ss_dssp GTTTS-HHHHHHHHHHHHHHHHHH
T ss_pred hHhhCCHHHHHHHHHHHHHHHHHH
Confidence 699999999999999998888763
No 151
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=48.34 E-value=46 Score=19.12 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=26.5
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 031230 55 AARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSE 93 (163)
Q Consensus 55 ~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~ 93 (163)
..+.... .|+.++..+|..+...+......+..+
T Consensus 31 i~~~~~~-----~W~~l~~~~k~~y~~~a~~~~~~y~~~ 64 (66)
T cd00084 31 ISKILGE-----MWKSLSEEEKKKYEEKAEKDKERYEKE 64 (66)
T ss_pred HHHHHHH-----HHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555 799999999999998888887776654
No 152
>PF07831 PYNP_C: Pyrimidine nucleoside phosphorylase C-terminal domain; InterPro: IPR013102 This domain is found at the C-terminal end of the large alpha/beta domain making up various pyrimidine nucleoside phosphorylases [, ]. It has slightly different conformations in different members of this family. For example, in pyrimidine nucleoside phosphorylase (PYNP, P77826 from SWISSPROT) there is an added three-stranded anti-parallel beta sheet as compared to other members of the family, such as Escherichia coli thymidine phosphorylase (TP, P07650 from SWISSPROT) []. The domain contains an alpha/ beta hammerhead fold and residues in this domain seem to be important in formation of the homodimer []. ; GO: 0016763 transferase activity, transferring pentosyl groups, 0006213 pyrimidine nucleoside metabolic process; PDB: 1AZY_A 1OTP_A 2TPT_A 3H5Q_A 1BRW_A 2WK5_C 2J0F_C 2WK6_B 1UOU_A 2DSJ_B ....
Probab=48.04 E-value=16 Score=22.85 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=25.3
Q ss_pred CCCeeeEecCCCHHHHHHHHHHHHHHhh
Q 031230 34 TEEIVGDIPAATAEDVELAVDAARQALS 61 (163)
Q Consensus 34 tg~~~~~~~~~~~~~i~~av~~a~~a~~ 61 (163)
.|++++++...++.+++++++..+.|+.
T Consensus 46 ~Gd~l~~i~~~~~~~~~~a~~~~~~a~~ 73 (75)
T PF07831_consen 46 KGDPLATIYANDEARLEEAVERLRAAIT 73 (75)
T ss_dssp TTSEEEEEEESSSSHHHHHHHHHHHHEE
T ss_pred CCCeEEEEEcCChHHHHHHHHHHHhCcc
Confidence 4899999999999999999999998874
No 153
>PRK00285 ihfA integration host factor subunit alpha; Reviewed
Probab=46.91 E-value=67 Score=20.82 Aligned_cols=39 Identities=18% Similarity=0.000 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAE 128 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~ 128 (163)
++++|+..++..+|.+..++..-++...+.+........
T Consensus 4 tk~el~~~ia~~~~~s~~~v~~vl~~~~~~i~~~L~~g~ 42 (99)
T PRK00285 4 TKADLAEALFEKVGLSKREAKELVELFFEEIRDALENGE 42 (99)
T ss_pred CHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 467899999999999988887777777777765555443
No 154
>PRK15117 ABC transporter periplasmic binding protein MlaC; Provisional
Probab=46.54 E-value=20 Score=27.00 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=21.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
-|+..+.++|.++...|.++|..
T Consensus 81 ~wr~as~eQr~~F~~~F~~~Lv~ 103 (211)
T PRK15117 81 YYKDATPAQREAYFAAFREYLKQ 103 (211)
T ss_pred hhhhCCHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999876
No 155
>PRK10664 transcriptional regulator HU subunit beta; Provisional
Probab=46.25 E-value=70 Score=20.53 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADL 126 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~ 126 (163)
++.+|+..++..+|.+..++..-|+...+.+......
T Consensus 2 tK~eli~~ia~~~~~s~~~~~~~v~~~~~~i~~~L~~ 38 (90)
T PRK10664 2 NKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKE 38 (90)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568888899999999988887777777777655544
No 156
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=46.14 E-value=40 Score=24.46 Aligned_cols=42 Identities=17% Similarity=0.095 Sum_probs=29.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHcCCCHHHHH
Q 031230 69 SSASGAFRAKYLRAIAAKITERKSE--LANLETIDCGKPLEEAV 110 (163)
Q Consensus 69 ~~~~~~~R~~~L~~~~~~l~~~~~~--la~~~~~e~Gkp~~~a~ 110 (163)
+.+|.++|.+++.-..+.+++..++ =-+.+..|.|.|..-|.
T Consensus 15 ~~lp~~e~~e~l~~Y~e~f~d~~~~G~sEeeii~~LG~P~~iA~ 58 (181)
T PF08006_consen 15 KKLPEEEREEILEYYEEYFDDAGEEGKSEEEIIAELGSPKEIAR 58 (181)
T ss_pred HcCCHHHHHHHHHHHHHHHHHhhhCCCCHHHHHHHcCCHHHHHH
Confidence 4589999999999999998875442 12345557787776554
No 157
>cd07049 BMC_EutL_repeat1 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 1. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of the eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 1 (the first BMC domain of EutL).
Probab=44.48 E-value=59 Score=21.77 Aligned_cols=31 Identities=19% Similarity=0.408 Sum_probs=27.6
Q ss_pred cCCCCCeeeEecCCCHHHHHHHHHHHHHHhh
Q 031230 31 NPTTEEIVGDIPAATAEDVELAVDAARQALS 61 (163)
Q Consensus 31 ~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~ 61 (163)
.|.+|+++.-+.-.+..+++.+++.+.+.+.
T Consensus 68 ~~~sG~vi~ii~G~dvsdV~sal~~~l~~l~ 98 (103)
T cd07049 68 TPLAGEVIGILAGPSPAEVRSGLNAAIDFIE 98 (103)
T ss_pred cCCCccEEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 5679999999999999999999999988776
No 158
>PF06163 DUF977: Bacterial protein of unknown function (DUF977); InterPro: IPR010382 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=42.70 E-value=1e+02 Score=21.39 Aligned_cols=43 Identities=9% Similarity=-0.031 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 031230 69 SSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW 111 (163)
Q Consensus 69 ~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ 111 (163)
+..+.++|.++..++.+++.+|...=..-+...+|.+.....-
T Consensus 3 ~~~T~eer~eLk~rIvElVRe~GRiTi~ql~~~TGasR~Tvk~ 45 (127)
T PF06163_consen 3 RVFTPEEREELKARIVELVREHGRITIKQLVAKTGASRNTVKR 45 (127)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCccHHHHHHHHCCCHHHHHH
Confidence 3468899999999999999999666666667778888766543
No 159
>TIGR03065 srtB_sig_QVPTGV sortase B signal domain, QVPTGV class. This model represents a boutique (unusual) sorting signal, recognized by a member of the sortase SrtB family rather than by the housekeeping sortase, SrtA.
Probab=42.09 E-value=16 Score=18.50 Aligned_cols=12 Identities=42% Similarity=0.974 Sum_probs=9.0
Q ss_pred eccceEEEEccC
Q 031230 152 EPIGVVGLITPW 163 (163)
Q Consensus 152 ~P~GVV~~IsPw 163 (163)
.|-||++-++||
T Consensus 2 vptgv~gtlapf 13 (32)
T TIGR03065 2 VPTGVAGTLAPF 13 (32)
T ss_pred Cccceeeeeccc
Confidence 477888887776
No 160
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=41.47 E-value=54 Score=20.06 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=23.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKITERKSEL 94 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~~~~~l 94 (163)
.|..++.++|..+........+++..++
T Consensus 39 ~Wk~ls~eeK~~y~~~A~~~k~~~~~~~ 66 (77)
T cd01389 39 MWRSESPEVKAYYKELAEEEKERHAREY 66 (77)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 7999999999998888888877776654
No 161
>PF15612 WHIM1: WSTF, HB1, Itc1p, MBD9 motif 1; PDB: 2Y9Z_B 2Y9Y_B.
Probab=41.25 E-value=57 Score=18.17 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=17.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKI 87 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l 87 (163)
.+..+++.+|..+|..+.+.+
T Consensus 13 ~y~~L~~~~kl~iL~~L~~~~ 33 (50)
T PF15612_consen 13 EYYELSPEEKLEILRALCDQL 33 (50)
T ss_dssp TCCCS-HHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHH
Confidence 678899999999999998876
No 162
>TIGR01201 HU_rel DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe.
Probab=38.50 E-value=94 Score=21.88 Aligned_cols=38 Identities=16% Similarity=-0.000 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLA 127 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~ 127 (163)
+.++|++.++.+++.+..++..=+....+.+.......
T Consensus 32 t~~el~~~Ia~~s~~s~~dv~~vl~~l~~~i~~~L~~G 69 (145)
T TIGR01201 32 DFEEIAELIAEESSLSPGDVKGIIDRLAYVLRRELANG 69 (145)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 56789999999999888777766666666666555543
No 163
>PF14376 Haem_bd: Haem-binding domain
Probab=38.43 E-value=1.4e+02 Score=20.85 Aligned_cols=77 Identities=14% Similarity=0.056 Sum_probs=53.4
Q ss_pred CeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 031230 25 KRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGK 104 (163)
Q Consensus 25 ~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gk 104 (163)
..++.+++.|.-+....-..-.--+..-|+.++++|.-. .|...+.......|.++...|++..=-+.......-+.
T Consensus 43 ~CydCHSn~T~~PwYa~i~p~s~l~~~dI~~Gr~~lNfs---~~~~~~~~~~~~~l~~i~~~I~~g~MP~~~Y~~~H~~a 119 (137)
T PF14376_consen 43 SCYDCHSNNTRYPWYANIAPASWLMEKDIKEGRRHLNFS---EWGSYSKRKQEAKLAKIEEVIEDGEMPPPSYTLLHWEA 119 (137)
T ss_pred cccccCCCCCCCccceecCchHHHHHHHHHHHHHHhCcc---hhhhcCcccCHHHHHHHHHHHHcCCCChHHHhhhCCCC
Confidence 356677777765554333333447777788888888743 89888888888899999999988765555555544443
No 164
>COG0776 HimA Bacterial nucleoid DNA-binding protein [DNA replication, recombination, and repair]
Probab=38.27 E-value=1.2e+02 Score=19.97 Aligned_cols=40 Identities=20% Similarity=0.085 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHHhhhh
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEG 129 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~~~~ 129 (163)
.+.||++.++...+.+..++..-|+...+.+.......++
T Consensus 3 tKseli~~ia~~~~l~k~~a~~~v~~~~~~i~~aL~~G~~ 42 (94)
T COG0776 3 TKSELIDAIAEKAGLSKKDAEEAVDAFLEEITEALAKGER 42 (94)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 4678999999999988888877777888877766665443
No 165
>PF07208 DUF1414: Protein of unknown function (DUF1414); InterPro: IPR009857 This family consists of several hypothetical bacterial proteins of around 70 residues in length. Members of this family are often referred to as YejL. The function of this family is unknown.; PDB: 2JPQ_A 2JUZ_B 2JUW_B 2QTI_A 2OTA_A 2JR2_A 2JRX_A.
Probab=37.12 E-value=66 Score=18.00 Aligned_cols=21 Identities=19% Similarity=0.169 Sum_probs=17.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 031230 69 SSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 69 ~~~~~~~R~~~L~~~~~~l~~ 89 (163)
...+..+|..+-.+|++.|..
T Consensus 22 ~~V~~~qR~~iAe~Fa~AL~~ 42 (44)
T PF07208_consen 22 TSVPPAQRQAIAEKFAQALKS 42 (44)
T ss_dssp HCS-HHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHh
Confidence 467899999999999998864
No 166
>COG4709 Predicted membrane protein [Function unknown]
Probab=36.83 E-value=66 Score=24.02 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=26.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHcCCCHHHH
Q 031230 68 WSSASGAFRAKYLRAIAAKITERKSEL--ANLETIDCGKPLEEA 109 (163)
Q Consensus 68 w~~~~~~~R~~~L~~~~~~l~~~~~~l--a~~~~~e~Gkp~~~a 109 (163)
.+.+|.++|.+++.-..+.+.+-.++= -+.+..+.|+|..-|
T Consensus 14 L~~Lp~~~r~e~m~dyeehF~~a~~~GksE~EI~~~LG~P~eiA 57 (195)
T COG4709 14 LEGLPREERREIMYDYEEHFREAQEAGKSEEEIAKDLGDPKEIA 57 (195)
T ss_pred HHhCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHhCCHHHHH
Confidence 467899999999877777766543322 233445677776443
No 167
>PF06304 DUF1048: Protein of unknown function (DUF1048); InterPro: IPR008316 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2O3L_B 2HH6_A 2O4T_A.
Probab=36.08 E-value=1.3e+02 Score=20.03 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=27.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHH
Q 031230 70 SASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCF 120 (163)
Q Consensus 70 ~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l 120 (163)
.++...-..+|.-+.+++++ ...-|+|+.+..+ ++...++.|
T Consensus 40 ~~~g~~~~~il~dildlfEe---------~aadG~~V~eviGeD~~~Fcdel 82 (103)
T PF06304_consen 40 PTDGRDMMEILSDILDLFEE---------AAADGKSVREVIGEDVAAFCDEL 82 (103)
T ss_dssp BSSHHHHHHHHHHHHHHHHH---------HHHTT--HHHHH-S-HHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHH---------HHHcCCChhHhhCCCHHHHHHHH
Confidence 45677777888888888877 4456999999887 777666654
No 168
>PF08793 2C_adapt: 2-cysteine adaptor domain; InterPro: IPR014901 The virus-specific 2-cysteine adaptor is found fused to OTU/A20-like peptidases and S/T protein kinases. The associations to these proteins indicate that they might function as viral adaptors connecting the kinases and OTU/A20 peptidases to specific targets [].
Probab=33.68 E-value=19 Score=19.30 Aligned_cols=13 Identities=38% Similarity=0.577 Sum_probs=9.7
Q ss_pred eeecCCCCCeeeE
Q 031230 28 PIVNPTTEEIVGD 40 (163)
Q Consensus 28 ~v~~P~tg~~~~~ 40 (163)
+.+||.||+.|..
T Consensus 10 p~~NP~Tgr~Ik~ 22 (37)
T PF08793_consen 10 PTVNPITGRKIKP 22 (37)
T ss_pred CCCCCCCCCcCCC
Confidence 3479999988754
No 169
>PHA02571 a-gt.4 hypothetical protein; Provisional
Probab=33.36 E-value=1.5e+02 Score=19.96 Aligned_cols=50 Identities=8% Similarity=-0.022 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHHH
Q 031230 76 RAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYAD 125 (163)
Q Consensus 76 R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~ 125 (163)
+.....++...|.+|+.||-.+=..--+.-+..-......+|..+|...+
T Consensus 28 e~eA~kkA~K~lkKN~rEIkRL~~HAe~al~~~Nk~~Y~YAI~KLR~i~k 77 (109)
T PHA02571 28 EAEAEKKAAKILKKNRREIKRLKKHAEEALFDNNKEQYVYAIKKLRDIYK 77 (109)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc
Confidence 46778888899999999998764443332222222344455555554443
No 170
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=32.25 E-value=75 Score=24.98 Aligned_cols=32 Identities=28% Similarity=0.339 Sum_probs=25.2
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHH
Q 031230 83 IAAKITERKSELANLETIDCGKPLEEAVWDID 114 (163)
Q Consensus 83 ~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~ 114 (163)
=++.+.++++.|.++.+..+|+|..+...+++
T Consensus 204 ~akE~~~~k~~l~~i~a~~Tgq~~e~i~~d~d 235 (275)
T KOG0840|consen 204 QAKELMRIKEYLNEIYAKHTGQPLEVIEKDMD 235 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcHHHHHhhhc
Confidence 35567788999999999999999977655444
No 171
>PTZ00199 high mobility group protein; Provisional
Probab=31.51 E-value=1.3e+02 Score=19.29 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=25.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKITERKSELAN 96 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~~~~~la~ 96 (163)
.|..++..+|..+..........+..++..
T Consensus 62 ~Wk~ls~eeK~~y~~~A~~dk~rY~~e~~~ 91 (94)
T PTZ00199 62 AWNKLSEEEKAPYEKKAQEDKVRYEKEKAE 91 (94)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999988888888877777654
No 172
>PF06518 DUF1104: Protein of unknown function (DUF1104); InterPro: IPR009488 This family consists of several hypothetical proteins of unknown function which appear to be found exclusively in Helicobacter pylori.; PDB: 2XRH_A.
Probab=30.83 E-value=1.2e+02 Score=19.82 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=19.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 031230 67 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCG 103 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~G 103 (163)
....++..+|.+....+...+.++.+.+..-...++|
T Consensus 56 n~~~ms~~e~~k~~~ev~k~~~~~~~~mS~kE~~~~g 92 (93)
T PF06518_consen 56 NLSKMSVEERKKRREEVRKALEKRIKKMSVKEAKESG 92 (93)
T ss_dssp HHTTS-HHHHHHHHHHHHHHHHHT----S--------
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 3577888888888888888888877766544444433
No 173
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=30.69 E-value=50 Score=31.70 Aligned_cols=21 Identities=14% Similarity=0.037 Sum_probs=19.0
Q ss_pred CCceeEEEEeccceEEEEccC
Q 031230 143 ENFKSYVLKEPIGVVGLITPW 163 (163)
Q Consensus 143 ~~~~~~~~r~P~GVV~~IsPw 163 (163)
.|..+.....|.|+|++|+||
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~ 1088 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADT 1088 (1208)
T ss_pred CCcceeEEecCCceEEEECCc
Confidence 466789999999999999998
No 174
>PF14216 DUF4326: Domain of unknown function (DUF4326)
Probab=30.53 E-value=1e+02 Score=19.79 Aligned_cols=16 Identities=6% Similarity=-0.097 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 031230 74 AFRAKYLRAIAAKITE 89 (163)
Q Consensus 74 ~~R~~~L~~~~~~l~~ 89 (163)
..|.+.+.++.+.|..
T Consensus 34 ~~R~~~v~~yr~~l~~ 49 (86)
T PF14216_consen 34 GDREEAVEKYREWLWG 49 (86)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 3477777777777753
No 175
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=29.35 E-value=78 Score=24.57 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=31.5
Q ss_pred eeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhh
Q 031230 27 IPIVNPTTEEIVGDIPAATAEDVELAVDAARQALS 61 (163)
Q Consensus 27 ~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~ 61 (163)
+.+.=|.-|......+..+.+++-.+++.||+.|+
T Consensus 185 l~vliPtpGtkm~~~~pp~~eE~i~v~~~AR~~f~ 219 (275)
T COG1856 185 LVVLIPTPGTKMGNSPPPPVEEAIKVVKYARKKFP 219 (275)
T ss_pred EEEEecCCchhccCCCCcCHHHHHHHHHHHHHhCC
Confidence 45566888999999999999999999999999998
No 176
>COG5440 Uncharacterized conserved protein [Function unknown]
Probab=28.83 E-value=1.2e+02 Score=21.83 Aligned_cols=56 Identities=9% Similarity=0.101 Sum_probs=37.6
Q ss_pred CCCCeeeeecCCCCCeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 031230 22 VLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITER 90 (163)
Q Consensus 22 ~~~~~~~v~~P~tg~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~ 90 (163)
.++..++|+-|..+....-++.+.. ...+..+ ...+++.++|.+++.++..-|...
T Consensus 39 ~~~~~i~VI~p~~~~d~viVA~gi~--------ls~eH~~-----al~aL~~e~R~efi~~l~~dLlr~ 94 (161)
T COG5440 39 TGGKVISVIQPPRGSDMVIVAIGIA--------LSQEHRR-----ALMALNPEKREEFIWKLRRDLLRL 94 (161)
T ss_pred CCCceEEEEecCCCCcEEEEEEeec--------cCHHHHH-----HHHhcChHHHHHHHHHHHHHHHhc
Confidence 3457788888888876665554432 2233444 457789999999999887766544
No 177
>COG2854 Ttg2D ABC-type transport system involved in resistance to organic solvents, auxiliary component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=28.70 E-value=82 Score=23.74 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=27.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 031230 67 DWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
-|+..++++|.++...|..+|+.. .+.++..=.|.++
T Consensus 83 ~~k~aspeQ~~~F~~aF~~yl~q~---Y~~aL~~Y~~q~~ 119 (202)
T COG2854 83 YYKTASPEQRQAFFKAFRTYLEQT---YGQALLDYKGQTL 119 (202)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHH---HHHHHHHccCCCc
Confidence 799999999999999999998874 3333443445443
No 178
>PF07278 DUF1441: Protein of unknown function (DUF1441); InterPro: IPR009901 This entry is represented by Bacteriophage VT1-Sakai, H0025. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown.
Probab=27.67 E-value=2.4e+02 Score=20.30 Aligned_cols=55 Identities=15% Similarity=0.134 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHHHHH
Q 031230 69 SSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYA 124 (163)
Q Consensus 69 ~~~~~~~R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a 124 (163)
.-.|..+=.+.+..++..+..-.+.|-..+.++.|.+. ++..++...|+.+|.-.
T Consensus 88 ~Lipa~eV~~~~s~~~Kav~q~LetlPD~LERd~gL~p-~~v~~vQ~~iD~lR~~l 142 (152)
T PF07278_consen 88 QLIPAEEVRREMSEMAKAVVQVLETLPDILERDAGLPP-EQVARVQSVIDDLRDQL 142 (152)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCCH-HHHHHHHHHHHHHHHHH
Confidence 45688888888899999999999999999999999877 44567888888877543
No 179
>TIGR00988 hip integration host factor, beta subunit. This protein forms a site-specific DNA-binding heterodimer with the homologous integration host factor alpha subunit. It is closely related to the DNA-binding protein HU.
Probab=27.08 E-value=1.7e+02 Score=18.55 Aligned_cols=38 Identities=13% Similarity=0.049 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHH-cCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230 90 RKSELANLETID-CGKPLEEAVWDIDDVAGCFEYYADLA 127 (163)
Q Consensus 90 ~~~~la~~~~~e-~Gkp~~~a~~ev~~~i~~l~~~a~~~ 127 (163)
++.+|++.++.. ++.+..++..-++...+.+.......
T Consensus 2 ~k~eli~~i~~~~~~~s~~~v~~vv~~~~~~i~~~L~~g 40 (94)
T TIGR00988 2 TKSELIERIATQQSHLPAKDVEDAVKTMLEHMASALAQG 40 (94)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 467888888865 57788888777777777776665543
No 180
>PF09655 Nitr_red_assoc: Conserved nitrate reductase-associated protein (Nitr_red_assoc); InterPro: IPR013481 Proteins in this entry are found in the Cyanobacteria, and are mostly encoded near nitrate reductase and molybdopterin biosynthesis genes. Molybdopterin guanine dinucleotide is a cofactor for nitrate reductase. These proteins are sometimes annotated as nitrate reductase-associated proteins, though their function is unknown.
Probab=26.93 E-value=61 Score=23.06 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=30.4
Q ss_pred CCCCCCHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHcCCCH
Q 031230 67 DWSSASGAFRAKYLRAI---AAKITERKSELANLETIDCGKPL 106 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~---~~~l~~~~~~la~~~~~e~Gkp~ 106 (163)
.|..++..+|..+..-- .+.++..++.|..++..-+|.|.
T Consensus 34 ~W~~l~~~eRq~Lv~~pc~t~~ei~~yr~~L~~li~~~~~~~~ 76 (144)
T PF09655_consen 34 HWQQLSQEERQQLVDLPCDTPEEIQNYREFLQELIRTHAGGPA 76 (144)
T ss_pred HHhcCCHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHhCCCc
Confidence 68999999998877543 45567778888888888877764
No 181
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=26.30 E-value=91 Score=15.10 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=14.8
Q ss_pred CCCeeeeecCCCCCeeeEe
Q 031230 23 LKKRIPIVNPTTEEIVGDI 41 (163)
Q Consensus 23 ~~~~~~v~~P~tg~~~~~~ 41 (163)
....+-.+|+.||+.++++
T Consensus 14 ~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 14 TDGTLYALDAKTGEILWTY 32 (33)
T ss_pred CCCEEEEEEcccCcEEEEc
Confidence 3456778899999998874
No 182
>PF10654 DUF2481: Protein of unknown function (DUF2481) ; InterPro: IPR018916 This entry is represented by Bacteriophage A500, Gp59. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=26.27 E-value=1.1e+02 Score=20.91 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=23.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 031230 68 WSSASGAFRAKYLRAIAAKITERKSEL 94 (163)
Q Consensus 68 w~~~~~~~R~~~L~~~~~~l~~~~~~l 94 (163)
-..+|..+|..++..+.+++.++.++=
T Consensus 21 n~dl~~~~~k~LqkeLn~Lm~~nTEeK 47 (126)
T PF10654_consen 21 NNDLSFSKRKELQKELNQLMNENTEEK 47 (126)
T ss_pred hCCCChHHHHHHHHHHHHHHhcchHHH
Confidence 467999999999999999999886653
No 183
>PF12085 DUF3562: Protein of unknown function (DUF3562); InterPro: IPR021945 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 62 to 84 amino acids in length. This protein has two completely conserved residues (A and Y) that may be functionally important.
Probab=25.49 E-value=1.7e+02 Score=17.91 Aligned_cols=24 Identities=17% Similarity=0.212 Sum_probs=18.5
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHHH
Q 031230 88 TERKSELANLETIDCGKPLEEAVW 111 (163)
Q Consensus 88 ~~~~~~la~~~~~e~Gkp~~~a~~ 111 (163)
..+.++++..++.++|.|..+...
T Consensus 3 ~~~~~e~i~~iA~~t~~P~e~V~~ 26 (66)
T PF12085_consen 3 QDNVDEVIRSIAEETGTPAETVRR 26 (66)
T ss_pred cccHHHHHHHHHHHHCCCHHHHHH
Confidence 356788888899999999766543
No 184
>PF12758 DUF3813: Protein of unknown function (DUF3813); InterPro: IPR024217 This entry represents a family of Bacillus proteins. Their function is unknown.
Probab=25.02 E-value=80 Score=19.10 Aligned_cols=37 Identities=27% Similarity=0.452 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 031230 48 DVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITE 89 (163)
Q Consensus 48 ~i~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~ 89 (163)
+.+.+|..|+.|.. |.+...+..+|.+ |..|.+.|+.
T Consensus 25 ~~q~~i~rAKnAls----SAyanss~aE~~Q-L~q~Q~qL~~ 61 (63)
T PF12758_consen 25 EQQKAIQRAKNALS----SAYANSSDAEREQ-LRQFQDQLDQ 61 (63)
T ss_pred HHHHHHHHHHHHHH----HHHHcCCHHHHHH-HHHHHHHHHh
Confidence 77788899998887 3788888888754 5666665553
No 185
>COG3313 Predicted Fe-S protein [General function prediction only]
Probab=24.63 E-value=95 Score=19.45 Aligned_cols=20 Identities=35% Similarity=0.566 Sum_probs=18.1
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q 031230 67 DWSSASGAFRAKYLRAIAAK 86 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~ 86 (163)
.|..++..+|.++|..+...
T Consensus 34 ~W~~msd~Er~aVl~~l~qr 53 (74)
T COG3313 34 NWSSMSDDERRAVLRLLPQR 53 (74)
T ss_pred HHhhCCHHHHHHHHHHhHHH
Confidence 69999999999999988766
No 186
>PRK09897 hypothetical protein; Provisional
Probab=24.04 E-value=72 Score=27.68 Aligned_cols=41 Identities=5% Similarity=0.080 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 031230 50 ELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSEL 94 (163)
Q Consensus 50 ~~av~~a~~a~~~~~~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l 94 (163)
..++...+..... -|..+|.++|..++++++..+..|+..+
T Consensus 350 ~~~i~~l~~~~~~----iw~~l~~~d~~rf~~~l~~~~~~~~~~m 390 (534)
T PRK09897 350 RYVILRLHEAVQE----IVPHLNEHDHKRFSKGLARVFIDNYAAI 390 (534)
T ss_pred HHHHHHHHHHHHH----HHHhCCHHHHHHHHHhhhHHHHHhccCC
Confidence 3566777765553 6999999999999999999988875544
No 187
>PRK00199 ihfB integration host factor subunit beta; Reviewed
Probab=23.49 E-value=2.1e+02 Score=18.23 Aligned_cols=38 Identities=11% Similarity=-0.031 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHH-cCCCHHHHHHhHHHHHHHHHHHHHhh
Q 031230 90 RKSELANLETID-CGKPLEEAVWDIDDVAGCFEYYADLA 127 (163)
Q Consensus 90 ~~~~la~~~~~e-~Gkp~~~a~~ev~~~i~~l~~~a~~~ 127 (163)
++.+|+..++.+ ++.+..++..-++...+.+.......
T Consensus 2 tk~eli~~ia~~~~~~s~~~~~~vv~~~~~~i~~~L~~g 40 (94)
T PRK00199 2 TKSELIERLAARNPHLSAKDVENAVKEILEEMSDALARG 40 (94)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 467888888875 57888887777777777776655543
No 188
>PF14098 SSPI: Small, acid-soluble spore protein I
Probab=23.42 E-value=92 Score=18.99 Aligned_cols=46 Identities=11% Similarity=0.315 Sum_probs=32.2
Q ss_pred eeeEecCCCHHHHHHHHHHHHH------------HhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 031230 37 IVGDIPAATAEDVELAVDAARQ------------ALSRNKGKDWSSASGAFRAKYLRAIAAK 86 (163)
Q Consensus 37 ~~~~~~~~~~~~i~~av~~a~~------------a~~~~~~~~w~~~~~~~R~~~L~~~~~~ 86 (163)
++..+.-.+.+++...+.-|-+ -|.. -|.+.+..+|-+++..+.+.
T Consensus 7 I~~nv~g~s~~el~~~I~daI~sgEE~~LPGLGVlFE~----~W~~~~~~ek~~m~~~l~~~ 64 (65)
T PF14098_consen 7 IIHNVKGSSKEELKDTIEDAIQSGEEKALPGLGVLFEV----IWKNSDESEKQEMVNTLEQG 64 (65)
T ss_pred HHHHccCCCHHHHHHHHHHHHhccchhcCCchHHHHHH----HHHhCCHHHHHHHHHHHHhc
Confidence 3456677788888888877665 2332 48888888888888776543
No 189
>PF05402 PqqD: Coenzyme PQQ synthesis protein D (PqqD); InterPro: IPR008792 This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.; PDB: 3G2B_A.
Probab=23.08 E-value=1.7e+02 Score=17.08 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHhHHHHHHHHH
Q 031230 90 RKSELANLETIDCGKPLEEAVWDIDDVAGCFE 121 (163)
Q Consensus 90 ~~~~la~~~~~e~Gkp~~~a~~ev~~~i~~l~ 121 (163)
..++|++.++...+-+..++..+|...+..|+
T Consensus 31 t~~ei~~~l~~~y~~~~~~~~~dv~~fl~~L~ 62 (68)
T PF05402_consen 31 TVEEIVDALAEEYDVDPEEAEEDVEEFLEQLR 62 (68)
T ss_dssp -HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 37788888888888888878778887777664
No 190
>PF07205 DUF1413: Domain of unknown function (DUF1413); InterPro: IPR010813 This family consists of several hypothetical bacterial proteins, which seem to be specific to Staphylococcus species. Members of this family are typically around 100 residues in length. The function of this family is unknown.
Probab=21.45 E-value=1.1e+02 Score=18.46 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=22.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHH
Q 031230 67 DWSSASGAFRAKYLRAIAAKITERKS 92 (163)
Q Consensus 67 ~w~~~~~~~R~~~L~~~~~~l~~~~~ 92 (163)
.|..++..+|..+-..+...+..+..
T Consensus 27 ~w~~~s~~~r~~~g~~F~~~V~~~~~ 52 (70)
T PF07205_consen 27 EWNTLSRAERQSLGRAFLYEVKQGPI 52 (70)
T ss_pred hhhhCCHHHHHHHHHHHHHHHHhCCC
Confidence 69999999999999999888877543
No 191
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=21.21 E-value=2.1e+02 Score=21.89 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 031230 76 RAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW 111 (163)
Q Consensus 76 R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~ 111 (163)
-+.=+..-++.|.+.++.+.++.+..+|+|..+-..
T Consensus 154 ~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~~ 189 (222)
T PRK12552 154 QATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLSK 189 (222)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 455577777888889999999999999999865543
No 192
>PRK09635 sigI RNA polymerase sigma factor SigI; Provisional
Probab=21.19 E-value=3e+02 Score=21.63 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=44.1
Q ss_pred CeeeEecCCCHHHHHHHHHHHHHHhhccCCCCCC---CCCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHcC
Q 031230 36 EIVGDIPAATAEDVELAVDAARQALSRNKGKDWS---SASGAFRAKYLRAIAAKITER-KSELANLETIDCG 103 (163)
Q Consensus 36 ~~~~~~~~~~~~~i~~av~~a~~a~~~~~~~~w~---~~~~~~R~~~L~~~~~~l~~~-~~~la~~~~~e~G 103 (163)
+.|+..-..+...+...+..|++..+ ... ..+..+..+++.++.+.+... .+.|..++..|.+
T Consensus 138 ~EIA~~Lgis~~tVr~~l~RAr~~Lr-----~~~~~~~~~~~~~~~~~~~f~~a~~~gd~~~l~~ll~~d~~ 204 (290)
T PRK09635 138 QQIATTIGSQASTCRQLAHRARRKIN-----ESRIAASVEPAQHRVVTRAFIEACSNGDLDTLLEVLDPGVA 204 (290)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHH-----hhCCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHhhhhhc
Confidence 33444555666677777777777666 322 245566778999999998754 8888989888875
No 193
>KOG1318 consensus Helix loop helix transcription factor EB [Transcription]
Probab=20.30 E-value=4.4e+02 Score=22.23 Aligned_cols=54 Identities=13% Similarity=0.035 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-hHHHHHHHHHHHHHhhhh
Q 031230 76 RAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEG 129 (163)
Q Consensus 76 R~~~L~~~~~~l~~~~~~la~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~~~~ 129 (163)
..-||.+.+|++.+-+.+..++.-.+..+...+... ++...++.|+..+.....
T Consensus 271 KgtILk~s~dYIr~Lqq~~q~~~E~~~rqk~le~~n~~L~~rieeLk~~~~~~~~ 325 (411)
T KOG1318|consen 271 KGTILKASCDYIRELQQTLQRARELENRQKKLESTNQELALRIEELKSEAGRHGL 325 (411)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhHHHhHHHHHHHHHHHHHHHHHHhcC
Confidence 678899999999999999998888888876666544 777788888777665443
No 194
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=20.15 E-value=5.1e+02 Score=21.52 Aligned_cols=16 Identities=38% Similarity=0.416 Sum_probs=13.8
Q ss_pred eEEEEeccceEEEEcc
Q 031230 147 SYVLKEPIGVVGLITP 162 (163)
Q Consensus 147 ~~~~r~P~GVV~~IsP 162 (163)
.++++.|.|+|+-|.|
T Consensus 81 ~~~~~~p~g~v~Hi~a 96 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAA 96 (399)
T ss_pred chhhccCCceEEEEcC
Confidence 6789999999988875
Done!