Query 031232
Match_columns 163
No_of_seqs 186 out of 1734
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 17:48:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031232.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031232hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 9.8E-24 3.3E-28 151.4 10.5 106 39-160 4-111 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 3.4E-22 1.2E-26 145.9 11.8 117 40-160 4-124 (155)
3 2yyh_A MUTT domain, 8-OXO-DGTP 99.9 4.3E-21 1.5E-25 137.1 15.4 110 37-159 7-119 (139)
4 4dyw_A MUTT/nudix family prote 99.9 5.7E-21 1.9E-25 139.8 15.0 112 36-161 26-141 (157)
5 2fb1_A Conserved hypothetical 99.9 1.1E-21 3.9E-26 152.3 11.4 115 37-161 11-128 (226)
6 1ktg_A Diadenosine tetraphosph 99.9 8E-21 2.7E-25 135.1 14.5 111 39-160 3-117 (138)
7 3gz5_A MUTT/nudix family prote 99.9 1.5E-21 5.1E-26 153.0 9.2 113 37-159 20-137 (240)
8 2b0v_A Nudix hydrolase; struct 99.9 8.4E-21 2.9E-25 137.2 12.2 109 38-160 7-119 (153)
9 3f6a_A Hydrolase, nudix family 99.9 1.8E-20 6E-25 137.0 13.9 108 39-161 6-133 (159)
10 3i9x_A MUTT/nudix family prote 99.8 1.5E-21 5E-26 146.8 8.0 112 39-160 27-154 (187)
11 3son_A Hypothetical nudix hydr 99.8 1.4E-20 4.6E-25 136.0 12.0 114 39-161 5-124 (149)
12 2pbt_A AP4A hydrolase; nudix p 99.8 8.1E-21 2.8E-25 134.3 10.6 106 39-160 4-111 (134)
13 1vcd_A NDX1; nudix protein, di 99.8 1.6E-20 5.5E-25 131.6 11.3 104 40-160 3-106 (126)
14 3gg6_A Nudix motif 18, nucleos 99.8 3.3E-20 1.1E-24 134.9 13.2 112 33-162 14-131 (156)
15 3eds_A MUTT/nudix family prote 99.8 1.5E-20 5.1E-25 136.8 11.1 97 63-161 33-135 (153)
16 3shd_A Phosphatase NUDJ; nudix 99.8 1.7E-20 5.7E-25 135.9 10.8 106 38-158 4-112 (153)
17 3q1p_A Phosphohydrolase (MUTT/ 99.8 5.4E-20 1.8E-24 140.6 12.6 110 37-161 66-178 (205)
18 3q93_A 7,8-dihydro-8-oxoguanin 99.8 1.4E-19 4.8E-24 135.1 13.6 95 63-160 36-133 (176)
19 1rya_A GDP-mannose mannosyl hy 99.8 7.8E-20 2.7E-24 133.0 11.9 111 37-160 16-137 (160)
20 3exq_A Nudix family hydrolase; 99.8 5.4E-20 1.8E-24 135.1 10.7 110 38-161 9-121 (161)
21 1sjy_A MUTT/nudix family prote 99.8 1.7E-19 5.9E-24 131.0 13.0 108 39-160 13-129 (159)
22 2pqv_A MUTT/nudix family prote 99.8 9.3E-20 3.2E-24 132.2 11.5 108 37-160 17-128 (154)
23 2fml_A MUTT/nudix family prote 99.8 1E-19 3.5E-24 145.0 12.7 115 37-160 37-156 (273)
24 3grn_A MUTT related protein; s 99.8 1.7E-19 5.7E-24 130.9 12.5 109 37-161 6-119 (153)
25 3id9_A MUTT/nudix family prote 99.8 1.9E-19 6.6E-24 132.8 13.0 109 37-161 21-135 (171)
26 3o8s_A Nudix hydrolase, ADP-ri 99.8 2.5E-19 8.6E-24 136.9 13.3 109 37-161 68-179 (206)
27 3h95_A Nucleoside diphosphate- 99.8 6.2E-20 2.1E-24 139.4 9.7 112 37-160 24-139 (199)
28 3gwy_A Putative CTP pyrophosph 99.8 2.4E-19 8.2E-24 128.2 12.3 104 39-160 6-115 (140)
29 2fvv_A Diphosphoinositol polyp 99.8 6.7E-20 2.3E-24 139.2 9.9 109 37-160 38-149 (194)
30 3fk9_A Mutator MUTT protein; s 99.8 1.6E-19 5.5E-24 136.2 11.8 95 64-160 16-113 (188)
31 3cng_A Nudix hydrolase; struct 99.8 5.6E-19 1.9E-23 133.1 14.4 104 37-159 38-144 (189)
32 3ees_A Probable pyrophosphohyd 99.8 7.8E-19 2.7E-23 126.4 13.9 93 63-160 33-129 (153)
33 2kdv_A RNA pyrophosphohydrolas 99.8 4E-19 1.4E-23 131.2 12.5 112 37-161 6-135 (164)
34 2azw_A MUTT/nudix family prote 99.8 1.5E-19 5.3E-24 129.7 9.9 110 37-160 16-129 (148)
35 3fcm_A Hydrolase, nudix family 99.8 3.3E-19 1.1E-23 135.1 11.0 114 37-161 43-167 (197)
36 3f13_A Putative nudix hydrolas 99.8 6.4E-19 2.2E-23 130.3 11.9 85 64-158 28-112 (163)
37 2o1c_A DATP pyrophosphohydrola 99.8 5.9E-19 2E-23 126.5 11.3 109 39-160 9-131 (150)
38 3oga_A Nucleoside triphosphata 99.8 1.5E-18 5.1E-23 127.3 13.1 97 63-161 39-149 (165)
39 2b06_A MUTT/nudix family prote 99.8 1.4E-18 4.8E-23 125.9 12.5 112 37-161 6-119 (155)
40 1k2e_A Nudix homolog; nudix/MU 99.8 3.8E-19 1.3E-23 129.7 9.0 100 40-160 2-118 (156)
41 3r03_A Nudix hydrolase; struct 99.8 1.6E-18 5.5E-23 123.9 12.1 95 63-161 20-119 (144)
42 2w4e_A MUTT/nudix family prote 99.8 7E-19 2.4E-23 127.0 9.7 107 39-160 5-116 (145)
43 3hhj_A Mutator MUTT protein; n 99.8 1.7E-18 5.9E-23 126.1 11.5 95 63-161 41-140 (158)
44 2jvb_A Protein PSU1, mRNA-deca 99.8 6.8E-20 2.3E-24 131.7 3.9 107 40-161 5-114 (146)
45 3fjy_A Probable MUTT1 protein; 99.8 5E-19 1.7E-23 145.8 8.8 122 39-161 3-158 (364)
46 2fkb_A Putative nudix hydrolas 99.8 1.9E-18 6.5E-23 128.4 10.5 95 63-161 49-149 (180)
47 1vhz_A ADP compounds hydrolase 99.8 4.5E-18 1.5E-22 129.4 12.0 95 64-161 61-160 (198)
48 1vk6_A NADH pyrophosphatase; 1 99.8 1E-17 3.4E-22 133.4 14.1 94 63-161 151-246 (269)
49 1nqz_A COA pyrophosphatase (MU 99.8 1.3E-18 4.5E-23 131.1 8.5 109 37-158 32-147 (194)
50 2rrk_A ORF135, CTP pyrophospho 99.8 5.3E-18 1.8E-22 120.5 10.7 92 64-160 21-116 (140)
51 3q91_A Uridine diphosphate glu 99.8 2.4E-18 8.1E-23 133.2 9.6 134 14-161 11-188 (218)
52 1hzt_A Isopentenyl diphosphate 99.8 2.4E-18 8.2E-23 129.4 8.8 108 39-160 32-149 (190)
53 2yvp_A NDX2, MUTT/nudix family 99.8 1.1E-18 3.8E-23 130.2 6.7 121 25-160 26-153 (182)
54 1f3y_A Diadenosine 5',5'''-P1, 99.7 9.6E-19 3.3E-23 127.4 5.8 113 36-160 11-144 (165)
55 1q33_A Pyrophosphatase, ADP-ri 99.7 2.5E-17 8.6E-22 132.4 13.8 124 37-161 108-262 (292)
56 2dsc_A ADP-sugar pyrophosphata 99.7 8.7E-18 3E-22 128.8 10.1 110 40-160 62-182 (212)
57 3o6z_A GDP-mannose pyrophospha 99.7 4.3E-18 1.5E-22 128.6 7.8 107 39-160 45-165 (191)
58 1mut_A MUTT, nucleoside tripho 99.7 2.5E-18 8.6E-23 120.4 5.9 94 63-161 16-113 (129)
59 1v8y_A ADP-ribose pyrophosphat 99.7 9.4E-18 3.2E-22 123.9 9.3 105 39-160 34-143 (170)
60 1q27_A Putative nudix hydrolas 99.7 9.3E-18 3.2E-22 123.7 8.0 105 39-159 34-146 (171)
61 1mk1_A ADPR pyrophosphatase; n 99.7 4E-18 1.4E-22 130.3 6.0 95 63-160 55-157 (207)
62 2qjo_A Bifunctional NMN adenyl 99.7 7.8E-18 2.7E-22 136.5 8.0 110 37-160 201-321 (341)
63 3e57_A Uncharacterized protein 99.7 4.2E-18 1.4E-22 131.1 5.7 111 35-160 63-187 (211)
64 1g0s_A Hypothetical 23.7 kDa p 99.7 9.3E-18 3.2E-22 128.6 7.2 107 40-160 58-178 (209)
65 2a6t_A SPAC19A8.12; alpha/beta 99.7 1.3E-17 4.6E-22 132.7 6.8 107 40-161 102-212 (271)
66 2qjt_B Nicotinamide-nucleotide 99.7 7.2E-17 2.5E-21 131.6 10.2 110 38-160 207-328 (352)
67 1x51_A A/G-specific adenine DN 99.7 2E-16 7E-21 114.8 8.8 109 38-160 18-132 (155)
68 1u20_A U8 snoRNA-binding prote 99.6 9.7E-16 3.3E-20 117.6 11.3 117 39-160 33-164 (212)
69 3qsj_A Nudix hydrolase; struct 99.6 5.3E-15 1.8E-19 115.4 9.3 114 37-159 6-186 (232)
70 2xsq_A U8 snoRNA-decapping enz 99.6 7.1E-15 2.4E-19 113.5 8.5 93 64-159 66-171 (217)
71 3fsp_A A/G-specific adenine gl 99.5 3.5E-14 1.2E-18 117.4 11.4 89 63-160 252-344 (369)
72 2dho_A Isopentenyl-diphosphate 99.5 4.1E-14 1.4E-18 110.4 9.2 109 38-160 58-189 (235)
73 3dup_A MUTT/nudix family prote 99.5 9E-14 3.1E-18 112.1 10.1 114 38-160 117-241 (300)
74 2pny_A Isopentenyl-diphosphate 99.5 6.9E-14 2.3E-18 109.9 8.1 109 38-160 69-200 (246)
75 3bho_A Cleavage and polyadenyl 99.3 3.9E-12 1.3E-16 96.8 8.9 73 33-116 51-130 (208)
76 3rh7_A Hypothetical oxidoreduc 99.3 1.6E-12 5.4E-17 105.8 6.7 94 37-160 181-275 (321)
77 3kvh_A Protein syndesmos; NUDT 99.3 5.6E-13 1.9E-17 100.6 3.2 95 37-137 19-115 (214)
78 4fp5_D LT-IIB, heat-labIle ent 26.1 47 0.0016 20.9 2.4 37 58-96 30-66 (98)
79 1qb5_D Protein (heat labIle en 25.5 48 0.0016 21.0 2.4 37 58-96 30-66 (99)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.90 E-value=9.8e-24 Score=151.44 Aligned_cols=106 Identities=24% Similarity=0.269 Sum_probs=80.6
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEe
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK 118 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~ 118 (163)
..+||+|+++.+ +|||++++ .|.|.||||++|+|||+.+||+||++||||+.+..... ++.+.+.
T Consensus 4 ~~aag~vv~~~~-------------~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~-l~~~~~~ 68 (134)
T 3i7u_A 4 EFSAGGVLFKDG-------------EVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDY-IGEIHYW 68 (134)
T ss_dssp EEEEEEEEEETT-------------EEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEEEE
T ss_pred EEEEEEEEEECC-------------EEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeee-eeeeeEE
Confidence 478899998753 79999875 47899999999999999999999999999999988777 7765544
Q ss_pred eCCCCc--eEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 119 SRAHNT--DYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 119 ~~~~~~--~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
....+. ....++|.+...+.. ..+..+..+++|++++++..
T Consensus 69 ~~~~~~~~~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~e~~~ 111 (134)
T 3i7u_A 69 YTLKGERIFKTVKYYLMKYKEGE-PRPSWEVKDAKFFPIKEAKK 111 (134)
T ss_dssp EEETTEEEEEEEEEEEEEEEEEC-CCCCTTSSEEEEEEHHHHHH
T ss_pred ecCCCceEEEEEEEEEEEEcCCc-CcCChhheEEEEEEHHHHhh
Confidence 332222 344567777665432 33445668999999998754
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.88 E-value=3.4e-22 Score=145.88 Aligned_cols=117 Identities=22% Similarity=0.237 Sum_probs=81.5
Q ss_pred EEEEEEEEEeecCcccccccCCceEEEEEEEcCC-CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEe
Q 031232 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK 118 (163)
Q Consensus 40 ~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~-~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~ 118 (163)
.++|+|+|+.. -..++.+++.++||++++.+ +.|.||||++++|||+.+||+||++||||+.+..... ++.+...
T Consensus 4 ra~G~iifr~~---~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~-~~~~~~~ 79 (155)
T 3u53_A 4 RACGLIIFRRC---LIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTI-IEGFKRE 79 (155)
T ss_dssp CEEEEEEEEEC---CCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEE-EEEEEEE
T ss_pred eEeEEEEEccc---cccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCcccccee-eeeEeee
Confidence 46899999852 12234467889999998764 7899999999999999999999999999999766555 4433221
Q ss_pred --eCCCCceEEEEEEEEEeccc-cCCCCcCcceeEEEEecCCCcc
Q 031232 119 --SRAHNTDYQGYMFPLLVQDQ-LAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 119 --~~~~~~~~~~~~f~~~~~~~-~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
...........+|.+..... ....+.++..+++|++++++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~ 124 (155)
T 3u53_A 80 LNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQ 124 (155)
T ss_dssp EEEEETTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHH
T ss_pred eecCCCcceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHH
Confidence 11222334445555554432 2333445568999999998754
No 3
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.87 E-value=4.3e-21 Score=137.11 Aligned_cols=110 Identities=17% Similarity=0.124 Sum_probs=84.4
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceE--EEEEEEcCC-CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLE--VLVISSQKG-KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~--vLLv~r~~~-~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~ 113 (163)
.|+.+|++|+++.+ ++++ |||++|... +.|.||||++++|||+++||+||++||||+.+..... ++
T Consensus 7 ~p~~~v~~vi~~~~----------~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~ 75 (139)
T 2yyh_A 7 TPLLATDVIIRLWD----------GENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKL-MG 75 (139)
T ss_dssp CCEEEEEEEEEEEE----------TTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE-EE
T ss_pred CCeEEEEEEEEEEc----------CCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceE-EE
Confidence 57899999999864 3345 999998764 5699999999999999999999999999999887766 77
Q ss_pred EEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCc
Q 031232 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPV 159 (163)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~ 159 (163)
.+.+...........++|.+..... ..+.++..+++|++++++.
T Consensus 76 ~~~~~~~~~~~~~~~~~f~~~~~~~--~~~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 76 VYSDPERDPRAHVVSVVWIGDAQGE--PKAGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp EECCTTSCTTSCEEEEEEEEEEESC--CCCCTTEEEEEEECTTSCC
T ss_pred EECCCCcCCCceEEEEEEEEecCCc--cCCCCCcceEEEEEHHHCC
Confidence 6654333223356667888876432 2234456799999999987
No 4
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.87 E-value=5.7e-21 Score=139.77 Aligned_cols=112 Identities=15% Similarity=0.073 Sum_probs=86.5
Q ss_pred CCCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceee
Q 031232 36 KGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELL 112 (163)
Q Consensus 36 ~~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l 112 (163)
..++.+|++|+++. ++|||++|.+ .+.|.||||++++|||+.+||+||++||||+.+..... +
T Consensus 26 ~~~~~~v~~vi~~~-------------~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~ 91 (157)
T 4dyw_A 26 EQPRVGCGAAIVRD-------------GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATL-L 91 (157)
T ss_dssp CCCEEEEEEEEEET-------------TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEE-E
T ss_pred CCceeEEEEEEEEC-------------CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcE-E
Confidence 36788888888873 2799999984 47899999999999999999999999999999887777 7
Q ss_pred eEEEEeeCCCCceEEEEEEEEEeccccC-CCCcCcceeEEEEecCCCccC
Q 031232 113 GEWNFKSRAHNTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~e~~~~ 161 (163)
+.+.+...........++|.+....... .....+..+++|++++++...
T Consensus 92 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 141 (157)
T 4dyw_A 92 CVVDHIDAANGEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQP 141 (157)
T ss_dssp EEEEEEETTTTEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCSS
T ss_pred EEEEeeccCCCcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHcccc
Confidence 7777666544455666777776543322 223345678999999998763
No 5
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.86 E-value=1.1e-21 Score=152.33 Aligned_cols=115 Identities=16% Similarity=0.167 Sum_probs=88.2
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~ 113 (163)
.|.++|++||+..+ +++++|||++|.. .|.|.||||++++|||+++||+||++||||+.+..... ++
T Consensus 11 ~p~v~v~~vi~~~~---------~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~-l~ 80 (226)
T 2fb1_A 11 TFYLGIDCIIFGFN---------EGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQ-VG 80 (226)
T ss_dssp CEEEEEEEEEEEEE---------TTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEE-EE
T ss_pred CCeEEEEEEEEEEe---------CCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEE-EE
Confidence 56899999999875 4667999999876 37899999999999999999999999999999887777 77
Q ss_pred EEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCccC
Q 031232 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.+..............+|.+.+.......+..+..+++|++++++..+
T Consensus 81 ~~~~~~r~~~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l 128 (226)
T 2fb1_A 81 AFGAIDRDPGERVVSIAYYALININEYDRELVQKHNAYWVNINELPAL 128 (226)
T ss_dssp EECCTTSSSSSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCB
T ss_pred EeCCCCcCCCceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhc
Confidence 776444333345556677776654322222334578999999998653
No 6
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.86 E-value=8e-21 Score=135.08 Aligned_cols=111 Identities=18% Similarity=0.180 Sum_probs=80.8
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcCC-CCEEecCcccCCCCCHHHHHHHHHHHHhCCe---eeeeceeeeE
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-KGMLFPKGGWEIDESIQEAALRETIEEAGVT---GIVECELLGE 114 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~-~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~---~~~~~~~l~~ 114 (163)
..+|++|+++.+ +++++|||++++.. +.|.||||++++|||+++||+||++||||+. +......++.
T Consensus 3 ~~~~~~vi~~~~---------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 73 (138)
T 1ktg_A 3 VKAAGLVIYRKL---------AGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHET 73 (138)
T ss_dssp EEEEEEEEEEEE---------TTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEE
T ss_pred eEEEEEEEEEec---------CCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccce
Confidence 578889999874 34578999998743 5899999999999999999999999999995 4433111445
Q ss_pred EEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 115 WNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
+.+... ......++|.+.........+..+..+++|++++++..
T Consensus 74 ~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 117 (138)
T 1ktg_A 74 LFYEAK--GKPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIK 117 (138)
T ss_dssp EEEEET--TEEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHH
T ss_pred EEEEeC--CCceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHH
Confidence 555443 33456778888776532233344568999999987654
No 7
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.85 E-value=1.5e-21 Score=153.00 Aligned_cols=113 Identities=19% Similarity=0.185 Sum_probs=88.2
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC---CCCEEecCcccCC--CCCHHHHHHHHHHHHhCCeeeeecee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEI--DESIQEAALRETIEEAGVTGIVECEL 111 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPGG~ve~--gEs~~eaA~REl~EEtGl~~~~~~~~ 111 (163)
.|.++|++||+... +++++|||++|.. .|.|.||||++++ |||+++||+||++||||+.+....+
T Consensus 20 ~p~v~v~~vi~~~~---------~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~- 89 (240)
T 3gz5_A 20 AQLLTVDAVLFTYH---------DQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQ- 89 (240)
T ss_dssp -CEEEEEEEEEEEE---------TTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEE-
T ss_pred CCccEEEEEEEEEe---------CCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceee-
Confidence 56799999999875 4668999999876 3789999999999 9999999999999999999888777
Q ss_pred eeEEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCc
Q 031232 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPV 159 (163)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~ 159 (163)
++++.............++|.+.+.........++..+++|++++++.
T Consensus 90 l~~~~~~~r~~~~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~ 137 (240)
T 3gz5_A 90 LCTVGNNSRDARGWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVL 137 (240)
T ss_dssp EEEEEESSSSTTSCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHT
T ss_pred EEEeCCCccCCCceEEEEEEEEEecccccCCCCCcccceEEecHHHcc
Confidence 888777655555556667777766543222123445789999999875
No 8
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.85 E-value=8.4e-21 Score=137.17 Aligned_cols=109 Identities=19% Similarity=0.201 Sum_probs=81.5
Q ss_pred CeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCC---CEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeE
Q 031232 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGK---GMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (163)
Q Consensus 38 ~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~---~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~ 114 (163)
++.+|++|+.+. ++|||+++...+ .|.||||++++|||+++||+||++||||+.+..... ++.
T Consensus 7 ~~~~v~~ii~~~-------------~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~ 72 (153)
T 2b0v_A 7 PNVTVAAVIEQD-------------DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVL-TGI 72 (153)
T ss_dssp CEEEEEEECEET-------------TEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEE-EEE
T ss_pred CCEEEEEEEeeC-------------CEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceE-EEE
Confidence 466777766543 279999987644 799999999999999999999999999999987777 777
Q ss_pred EEEeeCCCCceEEEEEEEEEeccccC-CCCcCcceeEEEEecCCCcc
Q 031232 115 WNFKSRAHNTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~e~~~ 160 (163)
+.+........+..++|.+....... ...+.+..+++|++++++..
T Consensus 73 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 119 (153)
T 2b0v_A 73 YHWTCASNGTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRA 119 (153)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEECTTSCCCTTEEEEEEEEHHHHHH
T ss_pred EEEeCCCCCcEEEEEEEEEEeCCCCCCCCCCCCeeeEEEecHHHHhh
Confidence 76665543334556678776654322 22344567999999988765
No 9
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.85 E-value=1.8e-20 Score=137.03 Aligned_cols=108 Identities=19% Similarity=0.109 Sum_probs=79.1
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEE---
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW--- 115 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~--- 115 (163)
..+|++|+++.+ +|||++++..+.|.||||++++|||+.+||+||++||||+.+..... ++.+
T Consensus 6 ~~~v~~vi~~~~-------------~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~ 71 (159)
T 3f6a_A 6 HFTVSVFIVCKD-------------KVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNP-IDINLKK 71 (159)
T ss_dssp CEEEEEEEEETT-------------EEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCC-CCHHHHH
T ss_pred eEEEEEEEEECC-------------EEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceeccc-ccccccc
Confidence 577788888632 79999998889999999999999999999999999999999877665 4321
Q ss_pred -----------------EEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCccC
Q 031232 116 -----------------NFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 116 -----------------~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.+... .......++|.+............+..+++|++++++...
T Consensus 72 ~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 133 (159)
T 3f6a_A 72 SCDLSGEKLLINPIHTILGDVS-PNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNA 133 (159)
T ss_dssp HHHHTTCEEECCCSEEEEECSS-SSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTC
T ss_pred cccccccccccCccccccccCC-CCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhC
Confidence 00000 1123455678887655433333455688999999998754
No 10
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.85 E-value=1.5e-21 Score=146.84 Aligned_cols=112 Identities=21% Similarity=0.151 Sum_probs=81.4
Q ss_pred eEEEEEEEEEeecCcccccccCC----ceEEEEEEEc----------CCCCEEecCcccCCCCCHHHHHHHHHHHHhCCe
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEE----DLEVLVISSQ----------KGKGMLFPKGGWEIDESIQEAALRETIEEAGVT 104 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~----~~~vLLv~r~----------~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~ 104 (163)
.++|+++++... ++ +++|||++|. ..+.|.||||++++|||+++||+||++||||+.
T Consensus 27 ~~~v~~vv~~~~---------~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~ 97 (187)
T 3i9x_A 27 GYTSDMILTTVK---------ELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLT 97 (187)
T ss_dssp EEEEEEEEEEEE---------EETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCC
T ss_pred cceEEEEEEEEc---------CCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCC
Confidence 499999999875 23 5789999993 247899999999999999999999999999999
Q ss_pred eeeeceeeeEEEEeeCCCCceEEEEEEEEEecccc--CCCCcCcceeEEEEecCCCcc
Q 031232 105 GIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL--AEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 105 ~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~~~~e~~~ 160 (163)
+..... ++.+..............+|.+.+.... ...+..+..+++|++++++..
T Consensus 98 ~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 98 DIPLIP-FGVFDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp SCCCEE-EEEECCTTSSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTT
T ss_pred CcceEE-EEEEcCCccCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHccc
Confidence 877777 7776554433333344445554443221 112334557899999998764
No 11
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.85 E-value=1.4e-20 Score=135.98 Aligned_cols=114 Identities=21% Similarity=0.192 Sum_probs=80.4
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeee-EEEE
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG-EWNF 117 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~-~~~~ 117 (163)
..+|+++++... +++++|||++|...+.|.||||++++|||+++||+||++||||+.+......+. .+.+
T Consensus 5 ~~~v~vvi~~~~---------~~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 75 (149)
T 3son_A 5 PFQVLVIPFIKT---------EANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASI 75 (149)
T ss_dssp CCEEEEEEEEEC---------SSSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEE
T ss_pred ceEEEEEEEEec---------CCCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecc
Confidence 457778888764 466799999998889999999999999999999999999999999765321122 1221
Q ss_pred ee---C-CCCceEEEEEEEEEeccc-cCCCCcCcceeEEEEecCCCccC
Q 031232 118 KS---R-AHNTDYQGYMFPLLVQDQ-LAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 118 ~~---~-~~~~~~~~~~f~~~~~~~-~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.. . ........++|.+..... .......+..+++|++++++...
T Consensus 76 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 124 (149)
T 3son_A 76 PNFHFSFNKPYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQL 124 (149)
T ss_dssp EGGGTCSSSCSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHH
T ss_pred cceeeccCCceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHH
Confidence 11 1 122345667888877631 12222355689999999987543
No 12
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.84 E-value=8.1e-21 Score=134.26 Aligned_cols=106 Identities=24% Similarity=0.276 Sum_probs=79.1
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEe
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK 118 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~ 118 (163)
..+|++|+++.+ +|||++|.. +.|.||||++++|||+.+||.||++||||+.+..... ++.+.+.
T Consensus 4 ~~~~~~vi~~~~-------------~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~ 68 (134)
T 2pbt_A 4 EFSAGGVLFKDG-------------EVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDY-IGEIHYW 68 (134)
T ss_dssp EEEEEEEEEETT-------------EEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEEEE
T ss_pred ceEEEEEEEECC-------------EEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeee-eeEEEEE
Confidence 456777777632 799999877 8999999999999999999999999999999887776 7765544
Q ss_pred eCCCC--ceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 119 SRAHN--TDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 119 ~~~~~--~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
....+ .....++|.+........ +..+..+++|++++++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~ 111 (134)
T 2pbt_A 69 YTLKGERIFKTVKYYLMKYKEGEPR-PSWEVKDAKFFPIKEAKK 111 (134)
T ss_dssp EEETTEEEEEEEEEEEEEEEEECCC-CCTTSSEEEEEEHHHHHH
T ss_pred eeCCCcEEEEEEEEEEEEecCCCcC-CCcceeEEEEEcHHHHHh
Confidence 33222 234567777766543222 223568999999987654
No 13
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.84 E-value=1.6e-20 Score=131.58 Aligned_cols=104 Identities=25% Similarity=0.260 Sum_probs=78.7
Q ss_pred EEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEee
Q 031232 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKS 119 (163)
Q Consensus 40 ~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~ 119 (163)
.+|++|+++.+ ++|||++|+. |.|.||||++++|||+.+||.||++||||+.+..... ++.+.+..
T Consensus 3 ~~~~~vi~~~~------------~~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~ 68 (126)
T 1vcd_A 3 LGAGGVVFNAK------------REVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLP-LYPTRYVN 68 (126)
T ss_dssp EEEEEEEECTT------------SCEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEE-EEEEEEEC
T ss_pred eEEEEEEEcCC------------CEEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccE-EeEEEEec
Confidence 56777887642 3799999876 8899999999999999999999999999999987777 77776655
Q ss_pred CCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 120 RAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 120 ~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
. ......++|.+...... ..++.+..+++|++++++..
T Consensus 69 ~--~~~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~ 106 (126)
T 1vcd_A 69 P--KGVEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARA 106 (126)
T ss_dssp T--TSCEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHH
T ss_pred C--CceEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHH
Confidence 3 22345566766554332 33344567999999987654
No 14
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.84 E-value=3.3e-20 Score=134.86 Aligned_cols=112 Identities=24% Similarity=0.195 Sum_probs=81.9
Q ss_pred ccCCCCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeec
Q 031232 33 RYQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEC 109 (163)
Q Consensus 33 ~~~~~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~ 109 (163)
++......++++++++. +++|||+++.+ .+.|.||||++++|||+++||+||++||||+.+....
T Consensus 14 ~~~~~~~~~v~~~i~~~------------~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~ 81 (156)
T 3gg6_A 14 RLRKNVCYVVLAVFLSE------------QDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPET 81 (156)
T ss_dssp CCCTTCEEEEEEECBCT------------TSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEE
T ss_pred ccCCceEEEEEEEEEeC------------CCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeee
Confidence 45555666777777653 34899999887 4789999999999999999999999999999998877
Q ss_pred eeeeEEEEeeCCCCceEEEEEEEEEeccccCC---CCcCcceeEEEEecCCCccCC
Q 031232 110 ELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAE---WPEKNVRSRKWVCTFMPVTCF 162 (163)
Q Consensus 110 ~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~e~~~~~W~~~~e~~~~~ 162 (163)
. ++.+... ..+..++|.+........ .++.+..+++|++++++...+
T Consensus 82 ~-~~~~~~~-----~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 131 (156)
T 3gg6_A 82 L-LSVEERG-----PSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPL 131 (156)
T ss_dssp E-EEEEESS-----TTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSB
T ss_pred E-EEEEcCC-----CCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccc
Confidence 7 7665421 124556777765432211 233456799999999987543
No 15
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.84 E-value=1.5e-20 Score=136.85 Aligned_cols=97 Identities=20% Similarity=0.213 Sum_probs=67.3
Q ss_pred eEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEE-----EEeeCCCCc-eEEEEEEEEEec
Q 031232 63 LEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW-----NFKSRAHNT-DYQGYMFPLLVQ 136 (163)
Q Consensus 63 ~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~-----~~~~~~~~~-~~~~~~f~~~~~ 136 (163)
++|||++|. .+.|.||||++++|||+.+||+||++||||+.+..... ++.+ .+....... ....++|.+...
T Consensus 33 ~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 110 (153)
T 3eds_A 33 GEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQ-KGVFGGKEYRYTYSNGDEVEYIVVVFECEVT 110 (153)
T ss_dssp CCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEE-EEEECSGGGEEECTTSCEEEEEEEEEEEEEE
T ss_pred CeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeE-EEEecccceeeecCCCCeEEEEEEEEEEEec
Confidence 479998877 78899999999999999999999999999999987776 7765 222232222 345677877765
Q ss_pred cccCCCCcCcceeEEEEecCCCccC
Q 031232 137 DQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 137 ~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.......+.+..+++|++++++...
T Consensus 111 ~~~~~~~~~E~~~~~W~~~~el~~l 135 (153)
T 3eds_A 111 SGELRSIDGESLKLQYFSLSEKPPL 135 (153)
T ss_dssp EECCC-------CEEEECGGGCCCB
T ss_pred CCccccCCCcEEEEEEECHHHCchh
Confidence 4433333445578999999998765
No 16
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.84 E-value=1.7e-20 Score=135.92 Aligned_cols=106 Identities=20% Similarity=0.283 Sum_probs=80.0
Q ss_pred CeEEEEEEEEEeecCcccccccCCceEEEEEEEcC--CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEE
Q 031232 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW 115 (163)
Q Consensus 38 ~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~--~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~ 115 (163)
++.+|++|+.+. ++|||++|.. .+.|.||||++++|||+++||+||++||||+.+..... ++.+
T Consensus 4 p~~~v~~ii~~~-------------~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~ 69 (153)
T 3shd_A 4 PHVTVACVVHAE-------------GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHF-IRMH 69 (153)
T ss_dssp CEEEEEEEEEET-------------TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEE-EEEE
T ss_pred CceEEEEEEEeC-------------CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcE-EEEE
Confidence 567777776653 2799999853 35799999999999999999999999999999887776 7777
Q ss_pred EEeeCCCCceEEEEEEEEEeccccC-CCCcCcceeEEEEecCCC
Q 031232 116 NFKSRAHNTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWVCTFMP 158 (163)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~e~ 158 (163)
.+.... ......++|.+....... ...+.+..+++|++++++
T Consensus 70 ~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 70 QWIAPD-KTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp EECCTT-SCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHH
T ss_pred EEecCC-CceEEEEEEEEEccccCcCCCCcccceeeEEecHHHh
Confidence 665543 334566788887765432 223445688999999887
No 17
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.83 E-value=5.4e-20 Score=140.59 Aligned_cols=110 Identities=10% Similarity=0.043 Sum_probs=81.5
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~ 116 (163)
.++.+|++++++. ++|||+++...|.|.||||++++|||+.+||+||++||||+.+..... ++.+.
T Consensus 66 ~~~~~v~~vv~~~-------------~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~-l~~~~ 131 (205)
T 3q1p_A 66 TPKVDIRAVVFQN-------------EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKL-LAIFD 131 (205)
T ss_dssp CCEEEEEEEEEET-------------TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEE
T ss_pred CCcceEEEEEEEC-------------CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceE-EEEEe
Confidence 5678888888863 279999988778999999999999999999999999999999987777 77665
Q ss_pred EeeC---CCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCccC
Q 031232 117 FKSR---AHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 117 ~~~~---~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.... ........++|.+...... ..+..+..+++|++++++...
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 132 KEKHQPSPSATHVYKIFIGCEIIGGE-KKTSIETEEVEFFGENELPNL 178 (205)
T ss_dssp HHHHSCCCCSSCEEEEEEEEEEEEEC-CCCCTTSCCEEEECTTSCCCB
T ss_pred ccccCCCCCCceEEEEEEEEEecCCc-cCCCCcceEEEEEeHHHhhhc
Confidence 4321 1223455677777665432 223355689999999998654
No 18
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.82 E-value=1.4e-19 Score=135.05 Aligned_cols=95 Identities=18% Similarity=0.046 Sum_probs=73.8
Q ss_pred eEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEecccc
Q 031232 63 LEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL 139 (163)
Q Consensus 63 ~~vLLv~r~~---~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 139 (163)
++|||++|.. .+.|.||||++++|||+++||+||++||||+.+..... ++.+.+...........++|.+......
T Consensus 36 ~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 114 (176)
T 3q93_A 36 QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHK-VGQIVFEFVGEPELMDVHVFCTDSIQGT 114 (176)
T ss_dssp SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEE-EEEEEEEETTCSCEEEEEEEEESCEESC
T ss_pred CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEE-EEEEEEEcCCCCcEEEEEEEEEECCCCC
Confidence 3799998865 37899999999999999999999999999999987777 8887776665445566677877543322
Q ss_pred CCCCcCcceeEEEEecCCCcc
Q 031232 140 AEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 140 ~~~~~~e~~~~~W~~~~e~~~ 160 (163)
. . ..+..+.+|++++++..
T Consensus 115 ~-~-~~e~~~~~W~~~~el~~ 133 (176)
T 3q93_A 115 P-V-ESDEMRPCWFQLDQIPF 133 (176)
T ss_dssp C-C-CCSSEEEEEEETTCCCG
T ss_pred c-C-CCcceeeEEeeHHHccc
Confidence 1 1 23346789999999764
No 19
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.82 E-value=7.8e-20 Score=132.97 Aligned_cols=111 Identities=18% Similarity=0.182 Sum_probs=80.5
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeee--eecee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGI--VECEL 111 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~--~~~~~ 111 (163)
.++.+|++|+++. +++|||++|.. .+.|.||||++++|||+++||+||++||||+.+. ....
T Consensus 16 ~~~~~v~~vi~~~------------~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~- 82 (160)
T 1rya_A 16 TPLVSLDFIVENS------------RGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQF- 82 (160)
T ss_dssp SCEEEEEEEEECT------------TSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEE-
T ss_pred CcEEEEEEEEEcC------------CCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceE-
Confidence 5678888888853 23699999876 4789999999999999999999999999999964 3344
Q ss_pred eeEEEEeeCCC------CceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 112 LGEWNFKSRAH------NTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 112 l~~~~~~~~~~------~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
++.+.+..... ......++|.+.........+..+..+++|++++++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 137 (160)
T 1rya_A 83 YGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLA 137 (160)
T ss_dssp EEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHH
T ss_pred EEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhh
Confidence 66665443321 12556777887765432222344567999999987653
No 20
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.82 E-value=5.4e-20 Score=135.07 Aligned_cols=110 Identities=19% Similarity=0.144 Sum_probs=81.5
Q ss_pred CeEEEEEEEEEeecCcccccccCCceEEEEEEEcCC---CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeE
Q 031232 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (163)
Q Consensus 38 ~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~---~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~ 114 (163)
++.++.+++++. +.++|||++|... |.|.||||++++|||+++||+||++||||+.+..... ++.
T Consensus 9 ~~~~v~~vi~~~-----------~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~ 76 (161)
T 3exq_A 9 VELVTMVMVTDP-----------ETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTF-CGT 76 (161)
T ss_dssp EEEEEEEEEBCT-----------TTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEE-EEE
T ss_pred ceEEEEEEEEeC-----------CCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcE-EEE
Confidence 355666666543 3357999988753 5688999999999999999999999999999887777 887
Q ss_pred EEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCccC
Q 031232 115 WNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
+.+...........++|.+....... ...+..+++|++++++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~ 121 (161)
T 3exq_A 77 CEWFDDDRQHRKLGLLYRASNFTGTL--KASAEGQLSWLPITALTRE 121 (161)
T ss_dssp EEEECSSCSSEEEEEEEEECCEESCC--CGGGTTTEEEECGGGCCTT
T ss_pred EecccCCCCeEEEEEEEEEeccCCcc--CCCccceEEEeeHHHhhhC
Confidence 77766444556667777776543321 2334468999999998753
No 21
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.82 E-value=1.7e-19 Score=131.02 Aligned_cols=108 Identities=16% Similarity=0.069 Sum_probs=80.2
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcC-------CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeecee
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECEL 111 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-------~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~ 111 (163)
+.++++|+++. +++|||++|.. .+.|.||||++++|||+++||+||++||||+.+.....
T Consensus 13 ~~~~~~vi~~~------------~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~- 79 (159)
T 1sjy_A 13 LRAAGVVLLNE------------RGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKF- 79 (159)
T ss_dssp EEEEEEEEBCT------------TCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEE-
T ss_pred EEeEEEEEEeC------------CCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEE-
Confidence 56666666643 24699999874 27899999999999999999999999999999887777
Q ss_pred eeEEEEeeCCCCceEEEEEEEEEecccc-CCC-CcCcceeEEEEecCCCcc
Q 031232 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQL-AEW-PEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~-~~~e~~~~~W~~~~e~~~ 160 (163)
++.+.+..... .....++|.+...... ... ...+..+++|++++++..
T Consensus 80 l~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 129 (159)
T 1sjy_A 80 LGAYLGRFPDG-VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQ 129 (159)
T ss_dssp EEEEEEECTTS-CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHH
T ss_pred EEEEecccCCC-ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHH
Confidence 77766543322 4567778888765433 222 344567999999987653
No 22
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.82 E-value=9.3e-20 Score=132.22 Aligned_cols=108 Identities=12% Similarity=0.067 Sum_probs=78.1
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~ 116 (163)
.++.++++|+++. ++|||++| .+.|.||||++++|||+++||+||++||||+.+..... ++.+.
T Consensus 17 ~~~~~~~~ii~~~-------------~~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~~~ 80 (154)
T 2pqv_A 17 VFGVRATALIVQN-------------HKLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQL-AFVVE 80 (154)
T ss_dssp EEEEEEEECCEET-------------TEEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEEE
T ss_pred eEeEEEEEEEEEC-------------CEEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceE-EEEEe
Confidence 4467777888753 26999988 67899999999999999999999999999999887666 66554
Q ss_pred EeeCCCCc--eEEEEEEEEEeccccCC--CCcCcceeEEEEecCCCcc
Q 031232 117 FKSRAHNT--DYQGYMFPLLVQDQLAE--WPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 117 ~~~~~~~~--~~~~~~f~~~~~~~~~~--~~~~e~~~~~W~~~~e~~~ 160 (163)
+....... ....++|.+........ .++.+..+++|++++++..
T Consensus 81 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 128 (154)
T 2pqv_A 81 NRFEVDGVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQN 128 (154)
T ss_dssp EEEEETTEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGG
T ss_pred eeecCCCCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhh
Confidence 33322222 33456777766543221 2233457899999999865
No 23
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.82 E-value=1e-19 Score=145.00 Aligned_cols=115 Identities=18% Similarity=0.182 Sum_probs=84.0
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCC---CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeee--ecee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIV--ECEL 111 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~---~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~--~~~~ 111 (163)
.|.++|++||++..++ .+..+|||++|... |.|.||||++++|||+++||+||++||||+.+.. ...
T Consensus 37 ~p~v~v~~vv~~~~~~-------~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~- 108 (273)
T 2fml_A 37 KPSLTVDMVLLCYNKE-------ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQ- 108 (273)
T ss_dssp CCEEEEEEEEEEEETT-------TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEE-
T ss_pred CCceEEEEEEEEEcCC-------CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEE-
Confidence 6789999999987511 12679999999763 7899999999999999999999999999987543 333
Q ss_pred eeEEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
++.+.........+...++|.+.+.... ..+..+..+++|++++++..
T Consensus 109 l~~~~~~~r~~~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 109 LHSFSRPDRDPRGWVVTVSYLAFIGEEP-LIAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp EEEECCTTSSTTSSEEEEEEEEECCCCC-CCCCTTEEEEEEEEEEEETT
T ss_pred EEEEcCCCCCCCceEEEEEEEEEeCCCC-CCCCcceeeEEEEEhhHhhh
Confidence 5555433333333566677877765433 34445568999999997543
No 24
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.82 E-value=1.7e-19 Score=130.90 Aligned_cols=109 Identities=19% Similarity=0.096 Sum_probs=81.1
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCC-----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeecee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECEL 111 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~-----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~ 111 (163)
..+.+|++|+++. +++|||++|... +.|.||||++++|||+.+||+||++||||+.+.....
T Consensus 6 ~~~~~v~~vi~~~------------~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~- 72 (153)
T 3grn_A 6 PYIISVYALIRNE------------KGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDI- 72 (153)
T ss_dssp CEEEEEEEEEECT------------TCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSE-
T ss_pred ceEEEEEEEEEcC------------CCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceE-
Confidence 3467777777753 247999998763 7899999999999999999999999999999887777
Q ss_pred eeEEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCccC
Q 031232 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
++.+.+... ......++|.+...... ..+..+..+++|++++++...
T Consensus 73 ~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 73 AGQVNFELT--EKKVIAIVFDGGYVVAD-VKLSYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp EEEEEEECS--SCEEEEEEEEEEECCCC-CCCCTTEEEEEEECHHHHTTC
T ss_pred EEEEEEecC--CceEEEEEEEEEecCCc-EecCCCcceEEEEEHHHhhhc
Confidence 777665543 23455667776654332 222345678999999887653
No 25
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.82 E-value=1.9e-19 Score=132.79 Aligned_cols=109 Identities=17% Similarity=0.093 Sum_probs=76.9
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW 115 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~ 115 (163)
..+..|++|+++. ++|||++|.. .+.|.||||++++|||+++||+||++||||+.+..... ++.+
T Consensus 21 ~~~~~v~~ii~~~-------------~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~ 86 (171)
T 3id9_A 21 IMQVRVTGILIED-------------EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKL-LYVC 86 (171)
T ss_dssp -CEEEEEEEEEET-------------TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEE
T ss_pred ceEEEEEEEEEEC-------------CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceE-EEEE
Confidence 4567777887753 2799999876 58899999999999999999999999999999887776 7666
Q ss_pred EEeeCCCCceEEEEEEEEEeccccCCC-----CcCcceeEEEEecCCCccC
Q 031232 116 NFKSRAHNTDYQGYMFPLLVQDQLAEW-----PEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~~~~~~-----~~~e~~~~~W~~~~e~~~~ 161 (163)
.+.... .....++|.+......... ...+..+++|++++++...
T Consensus 87 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 135 (171)
T 3id9_A 87 DKPDAS--PSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY 135 (171)
T ss_dssp EETTSS--SCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGG
T ss_pred cccCCC--CcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC
Confidence 554332 2234445655544322111 2244578999999998753
No 26
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.81 E-value=2.5e-19 Score=136.95 Aligned_cols=109 Identities=10% Similarity=0.072 Sum_probs=81.8
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~ 116 (163)
.++++|++++++. ++|||+++. .+.|.||||++++|||+.+||+||++||||+.+..... ++.+.
T Consensus 68 ~~~~~v~~vv~~~-------------~~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~ 132 (206)
T 3o8s_A 68 TPKLDTRAAIFQE-------------DKILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRV-VAILD 132 (206)
T ss_dssp CCEEEEEEEEEET-------------TEEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEE-EEEEE
T ss_pred CCCccEEEEEEEC-------------CEEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeE-EEEEe
Confidence 5678888888863 279999988 78999999999999999999999999999999988777 77665
Q ss_pred EeeCC---CCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCccC
Q 031232 117 FKSRA---HNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 117 ~~~~~---~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
+.... .......++|.+...... ..+..+..+++|++++++...
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~E~~~~~w~~~~el~~l 179 (206)
T 3o8s_A 133 KHKNNPAKSAHRVTKVFILCRLLGGE-FQPNSETVASGFFSLDDLPPL 179 (206)
T ss_dssp HHHHCC-----CEEEEEEEEEEEEEC-CCCCSSCSEEEEECTTSCCCB
T ss_pred ccccCCCCCCceEEEEEEEEEecCCe-ecCCCCceEEEEEeHHHhhhc
Confidence 32211 122455667777665432 223355689999999998654
No 27
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.81 E-value=6.2e-20 Score=139.38 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=73.8
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC--CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~--~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~ 114 (163)
.+++.|++++++. ++++|||++++. .+.|.||||++++|||+++||+||++||||+.+..... ++.
T Consensus 24 ~~~v~v~~~v~~~-----------~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l-~~~ 91 (199)
T 3h95_A 24 SHQVGVAGAVFDE-----------STRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSV-LSI 91 (199)
T ss_dssp --CCEEEEEEEET-----------TTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EEE
T ss_pred cccceEEEEEEeC-----------CCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceE-EEE
Confidence 5677888888864 345899999877 48899999999999999999999999999999886665 553
Q ss_pred EEEeeCCCCceEEEEEEEEEeccc--cCCCCcCcceeEEEEecCCCcc
Q 031232 115 WNFKSRAHNTDYQGYMFPLLVQDQ--LAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
...............+|.+.+... .....+.+..+++|++++++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 139 (199)
T 3h95_A 92 RQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAK 139 (199)
T ss_dssp EECC---------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHH
T ss_pred EeeecCCCCceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhh
Confidence 221111111122233444443321 2222344568999999987654
No 28
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.81 E-value=2.4e-19 Score=128.24 Aligned_cols=104 Identities=22% Similarity=0.110 Sum_probs=76.6
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcC------CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceee
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELL 112 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~------~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l 112 (163)
..++++|+++. ++|||++|.. .|.|.||||++++|||+++||.||++||||+.+..... +
T Consensus 6 ~~~v~~vi~~~-------------~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~-~ 71 (140)
T 3gwy_A 6 IEVVAAVIRLG-------------EKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEK-L 71 (140)
T ss_dssp EEEEEEEEEET-------------TEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-E
T ss_pred EEEEEEEEEeC-------------CEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceE-E
Confidence 45666666652 2699999874 35799999999999999999999999999999988777 7
Q ss_pred eEEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 113 GEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
+.+.+... ......++|.+....... ...+..+++|++++++..
T Consensus 72 ~~~~~~~~--~~~~~~~~f~~~~~~~~~--~~~E~~~~~W~~~~el~~ 115 (140)
T 3gwy_A 72 LTVHHTYP--DFEITMHAFLCHPVGQRY--VLKEHIAAQWLSTREMAI 115 (140)
T ss_dssp EEEECCCS--SCCEEEEEEEEEECCSCC--CCCSSCEEEEECHHHHTT
T ss_pred EEEEEEeC--CceEEEEEEEEEecCCcc--cccccceeEeccHHHHhh
Confidence 77665443 234566788887664322 123457899999988654
No 29
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.81 E-value=6.7e-20 Score=139.24 Aligned_cols=109 Identities=30% Similarity=0.547 Sum_probs=79.1
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW 115 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~ 115 (163)
.++..+++|+++. +++++|||+++.. .+.|.||||++++|||+++||+||++||||+.+..... ++.+
T Consensus 38 ~~~~~~~~vi~~~----------~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~-l~~~ 106 (194)
T 2fvv_A 38 GYKKRAACLCFRS----------ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRL-VGIF 106 (194)
T ss_dssp SCEEEEEEEEESS----------TTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEE-EEEE
T ss_pred CccccEEEEEEEE----------CCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceE-EEEE
Confidence 6678888888864 2456899999865 47899999999999999999999999999999887777 7776
Q ss_pred EEeeCCCCceEEEEEEEEEeccccCCCCcC--cceeEEEEecCCCcc
Q 031232 116 NFKSRAHNTDYQGYMFPLLVQDQLAEWPEK--NVRSRKWVCTFMPVT 160 (163)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~--e~~~~~W~~~~e~~~ 160 (163)
.+.. .. ...++|.+.+.......+.. +..+++|++++++..
T Consensus 107 ~~~~--~~--~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~ 149 (194)
T 2fvv_A 107 ENQE--RK--HRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIK 149 (194)
T ss_dssp EETT--TT--EEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHH
T ss_pred EcCC--Cc--eEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHH
Confidence 6422 12 23456666544322222211 125899999988654
No 30
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.81 E-value=1.6e-19 Score=136.22 Aligned_cols=95 Identities=19% Similarity=0.180 Sum_probs=71.6
Q ss_pred EEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCc---eEEEEEEEEEeccccC
Q 031232 64 EVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNT---DYQGYMFPLLVQDQLA 140 (163)
Q Consensus 64 ~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~---~~~~~~f~~~~~~~~~ 140 (163)
+|||++|...|.|.+|||++++|||+++||+||++||||+.+..... ++.+.+....... .+..++|.+......
T Consensus 16 ~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~- 93 (188)
T 3fk9_A 16 QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPEL-KGIFSMVIFDEGKIVSEWMLFTFKATEHEGE- 93 (188)
T ss_dssp EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEE-EEEEEEEEEETTEEEEEEEEEEEEESCEESC-
T ss_pred EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceE-EEEEEEEecCCCcceEEEEEEEEEEECCCCC-
Confidence 79999988789999999999999999999999999999999887666 7776665543332 225566766543322
Q ss_pred CCCcCcceeEEEEecCCCcc
Q 031232 141 EWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 141 ~~~~~e~~~~~W~~~~e~~~ 160 (163)
..+..+..+++|++++++..
T Consensus 94 ~~~~~e~~~~~W~~~~el~~ 113 (188)
T 3fk9_A 94 MLKQSPEGKLEWKKKDEVLE 113 (188)
T ss_dssp CCSEETTEEEEEEEGGGGGG
T ss_pred CcCCCCCEeEEEEEHHHhhh
Confidence 22333446899999999764
No 31
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.81 E-value=5.6e-19 Score=133.06 Aligned_cols=104 Identities=20% Similarity=0.192 Sum_probs=79.8
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~ 113 (163)
.++.+|++|+++. ++|||+++.. .+.|.||||++++|||+++||+||++||||+.+..... ++
T Consensus 38 ~~~~~v~~ii~~~-------------~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~ 103 (189)
T 3cng_A 38 NPKVIVGCIPEWE-------------NKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIREL-YA 103 (189)
T ss_dssp CCEEEEEEEEEET-------------TEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EE
T ss_pred CCceEEEEEEEeC-------------CEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCcccccee-EE
Confidence 5677888888763 2799999876 47899999999999999999999999999999887665 66
Q ss_pred EEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCc
Q 031232 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPV 159 (163)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~ 159 (163)
.+.+.. .....++|.+...... ..+..+..+++|++++++.
T Consensus 104 ~~~~~~----~~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 104 VYSLPH----ISQVYMLFRAKLLDLD-FFPGIESLEVRLFGEQEIP 144 (189)
T ss_dssp EEEEGG----GTEEEEEEEEEECCSC-CCCCTTEEEEEEECTTTCC
T ss_pred EEecCC----CcEEEEEEEEEeCCCc-cCCCccceeEEEECHHHcC
Confidence 554432 2345677877765432 2334556899999999987
No 32
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.81 E-value=7.8e-19 Score=126.43 Aligned_cols=93 Identities=19% Similarity=0.095 Sum_probs=71.6
Q ss_pred eEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEeccc
Q 031232 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQ 138 (163)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~ 138 (163)
++|||++|... |.|.||||++++|||+.+||.||++||||+.+..... ++.+.+.... .....++|.+.....
T Consensus 33 ~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~ 109 (153)
T 3ees_A 33 GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGEL-KLACTHSYGD--VGILILFYEILYWKG 109 (153)
T ss_dssp TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCE-EEEEEEEETT--EEEEEEEEEECEEES
T ss_pred CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCce-EEEEEEecCC--CeEEEEEEEEEECCC
Confidence 37999998764 7899999999999999999999999999999887776 7766555442 334557777765443
Q ss_pred cCCCCcCcceeEEEEecCCCcc
Q 031232 139 LAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 139 ~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
. ....+..+++|++++++..
T Consensus 110 ~--~~~~e~~~~~W~~~~el~~ 129 (153)
T 3ees_A 110 E--PRAKHHMMLEWIHPEELKH 129 (153)
T ss_dssp C--CCCSSSSEEEEECGGGGGG
T ss_pred C--cCCCccceEEEecHHHhhh
Confidence 2 2233457899999998765
No 33
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.81 E-value=4e-19 Score=131.17 Aligned_cols=112 Identities=23% Similarity=0.263 Sum_probs=80.2
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~ 116 (163)
.++.+|++++++. +++|||+++...+.|.+|||++++|||+++||.||++||||+.+..... ++.+.
T Consensus 6 ~~~~~v~~~i~~~------------~~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~-~~~~~ 72 (164)
T 2kdv_A 6 GYRPNVGIVICNR------------QGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRI-LASTR 72 (164)
T ss_dssp SEEEEEEEEEECT------------TSEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEE-EEECS
T ss_pred CCCcEEEEEEEcc------------CCEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEE-EEEec
Confidence 4577888888864 2479999998778999999999999999999999999999999876555 65532
Q ss_pred ----EeeCCC---------CceEEEEEEEEEeccccC---CC--CcCcceeEEEEecCCCccC
Q 031232 117 ----FKSRAH---------NTDYQGYMFPLLVQDQLA---EW--PEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 117 ----~~~~~~---------~~~~~~~~f~~~~~~~~~---~~--~~~e~~~~~W~~~~e~~~~ 161 (163)
|..... ......++|.+....... .. ++.+..+++|+++++++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 73 NWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp SCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred ceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhh
Confidence 222111 112356778877653211 11 2345689999999998764
No 34
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.81 E-value=1.5e-19 Score=129.66 Aligned_cols=110 Identities=25% Similarity=0.360 Sum_probs=77.4
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~ 116 (163)
..+..+++|+++. ++++|||++|. .|.|.||||++++|||+++||+||++||||+.+..... ++.+.
T Consensus 16 ~~~~~~~~vi~~~-----------~~~~vLl~~r~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~~~ 82 (148)
T 2azw_A 16 QTRYAAYIIVSKP-----------ENNTMVLVQAP-NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCY-LGEAD 82 (148)
T ss_dssp EECCEEEEECEEG-----------GGTEEEEEECT-TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEE
T ss_pred eeeeEEEEEEECC-----------CCCeEEEEEcC-CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeE-EEEEE
Confidence 3456777777764 23579999874 58999999999999999999999999999999887766 66543
Q ss_pred -E-eeCCCCc--eEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 117 -F-KSRAHNT--DYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 117 -~-~~~~~~~--~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
+ ....... ....++|.+....... .+..+..+++|++++++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~W~~~~el~~ 129 (148)
T 2azw_A 83 EYFYSNHRQTAYYNPGYFYVANTWRQLS-EPLERTNTLHWVAPEEAVR 129 (148)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEEEECS-SCC-CCSEEEEECHHHHHH
T ss_pred EEEcCCCCCcceEEEEEEEEEEcCcCCc-CCCCceeeEEEeeHHHHHh
Confidence 1 1111211 3446677776554322 2233456899999988754
No 35
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.80 E-value=3.3e-19 Score=135.06 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=72.5
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCe-eeeeceeeeEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVT-GIVECELLGEW 115 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~-~~~~~~~l~~~ 115 (163)
....++++++++. ++.+|||++++..|.|.||||++++|||+.+||+||++||||+. +.........+
T Consensus 43 ~~h~~~~~vv~~~-----------~~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~ 111 (197)
T 3fcm_A 43 IAHLTSSAFAVNK-----------ERNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFAL 111 (197)
T ss_dssp SEEEEEEEEEECT-----------TSCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEE
T ss_pred CccEEEEEEEEEC-----------CCCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEE
Confidence 3456777777763 34589999998889999999999999999999999999999998 54322101111
Q ss_pred EEee-CC--------CCceEEEEEEEEEeccccC-CCCcCcceeEEEEecCCCccC
Q 031232 116 NFKS-RA--------HNTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 116 ~~~~-~~--------~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.+.. .. ....+...+|.+....... ..+..+..+++|++++++...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 167 (197)
T 3fcm_A 112 DVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKY 167 (197)
T ss_dssp EEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHH
T ss_pred EEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhh
Confidence 1111 11 1112233555555553322 223345688999999987643
No 36
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.80 E-value=6.4e-19 Score=130.35 Aligned_cols=85 Identities=22% Similarity=0.158 Sum_probs=61.8
Q ss_pred EEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEeccccCCCC
Q 031232 64 EVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWP 143 (163)
Q Consensus 64 ~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 143 (163)
++||++++ .|.|.||||++++|||+++||+||++||||+.+..... ++.+.+.. ...++|.+..... ..+
T Consensus 28 ~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~------~~~~~f~~~~~~~--~~~ 97 (163)
T 3f13_A 28 GVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLY-LFDHITPF------NAHKVYLCIAQGQ--PKP 97 (163)
T ss_dssp EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEE-EEEEECSS------EEEEEEEEEC-CC--CCC
T ss_pred EEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEE-EEEEecCC------eEEEEEEEEECCc--Ccc
Confidence 69999876 58899999999999999999999999999999887776 66654322 4456677765433 223
Q ss_pred cCcceeEEEEecCCC
Q 031232 144 EKNVRSRKWVCTFMP 158 (163)
Q Consensus 144 ~~e~~~~~W~~~~e~ 158 (163)
.++..+++|++.+.+
T Consensus 98 ~~E~~~~~W~~~~~~ 112 (163)
T 3f13_A 98 QNEIERIALVSSPDT 112 (163)
T ss_dssp CTTCCEEEEESSTTC
T ss_pred CCCceEEEEECcccc
Confidence 345689999995443
No 37
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.79 E-value=5.9e-19 Score=126.53 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=76.7
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeee--ceeeeEE
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVE--CELLGEW 115 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~--~~~l~~~ 115 (163)
..+|++++++. +++++||++|+. .|.|.||||++++|||+.+||+||++||||+.+... .. ++..
T Consensus 9 ~~~v~~~i~~~-----------~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~-~~~~ 76 (150)
T 2o1c_A 9 PVSILVVIYAQ-----------DTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTL-IDCQ 76 (150)
T ss_dssp SEEEEEEEEET-----------TTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCE-EEEE
T ss_pred ceEEEEEEEeC-----------CCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeE-Eeee
Confidence 46788888864 234799999876 588999999999999999999999999999997653 22 3322
Q ss_pred E---E--------eeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 116 N---F--------KSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 116 ~---~--------~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
. | ...........++|.+........ ...+..+++|++++++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~ 131 (150)
T 2o1c_A 77 RTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQI-VFTEHLAYKWLDAPAAAA 131 (150)
T ss_dssp EEEEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCC-CCSSSSCEEEEEHHHHHH
T ss_pred ceeeeeeecccccccCCCCcceEEEEEEEEcCCCCCc-ChhHhhccEeecHHHHHh
Confidence 1 1 011112346677888876643322 224567999999988654
No 38
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.79 E-value=1.5e-18 Score=127.28 Aligned_cols=97 Identities=18% Similarity=0.026 Sum_probs=64.7
Q ss_pred eEEEEEEEcCC-----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEE------EEeeCCCCc---eEEE
Q 031232 63 LEVLVISSQKG-----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW------NFKSRAHNT---DYQG 128 (163)
Q Consensus 63 ~~vLLv~r~~~-----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~------~~~~~~~~~---~~~~ 128 (163)
++|||++|... +.|.||||++++|||+++||+||++||||+.+..... ++.. .+....... ....
T Consensus 39 ~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (165)
T 3oga_A 39 GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDI-TPWTFRDDIRIKTYADGRQEEIYMIY 117 (165)
T ss_dssp TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEE-EEEEEEEEEEEEEC--CCEEEEEEEE
T ss_pred CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccce-eeeeeecceeeEecCCCCceeEEEEE
Confidence 37999988743 6899999999999999999999999999999876554 3211 112221111 1233
Q ss_pred EEEEEEeccccCCCCcCcceeEEEEecCCCccC
Q 031232 129 YMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 129 ~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
++|.+...... ..+..+..+++|++++++...
T Consensus 118 ~~~~~~~~~~~-~~~~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 118 LIFDCVSANRD-ICINDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEEEEESCCC-CCCCTTEEEEEEECGGGGGGS
T ss_pred EEEEeeccCCC-ccCCchheeeEEccHHHHhhC
Confidence 45555444322 222345679999999998653
No 39
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.79 E-value=1.4e-18 Score=125.95 Aligned_cols=112 Identities=18% Similarity=0.158 Sum_probs=76.5
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCC--CEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGK--GMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~--~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~ 114 (163)
.++.++++|+++.+ .++..|||++|...+ .|.||||++++|||+++||+||++||||+.+..... ++.
T Consensus 6 ~~~~~~~~ii~~~~---------~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~ 75 (155)
T 2b06_A 6 LTILTNICLIEDLE---------TQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQL-VGI 75 (155)
T ss_dssp CEEEEEEEEEEETT---------TTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEE-EEE
T ss_pred CcEEEEEEEEEECC---------CCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCCcE-EEE
Confidence 34677778877642 133447777765432 389999999999999999999999999999887666 776
Q ss_pred EEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCccC
Q 031232 115 WNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
+.+... .......++|.+....... ...+..+++|++++++...
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~ 119 (155)
T 2b06_A 76 KNWPLD-TGGRYIVICYKATEFSGTL--QSSEEGEVSWVQKDQIPNL 119 (155)
T ss_dssp EEEECT-TSCEEEEEEEEECEEEECC--CCBTTBEEEEEEGGGGGGS
T ss_pred EeeccC-CCceEEEEEEEEEecCCCC--CCCcceeeEEeeHHHhhhC
Confidence 665542 2345566777775443221 1234578999999988653
No 40
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.79 E-value=3.8e-19 Score=129.72 Aligned_cols=100 Identities=16% Similarity=0.088 Sum_probs=70.3
Q ss_pred EEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEE---
Q 031232 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN--- 116 (163)
Q Consensus 40 ~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~--- 116 (163)
.+|++|+++. ++|||++++..|.|.||||++++|||+++||+||++||||+++..... ++.+.
T Consensus 2 ~~~~~vi~~~-------------~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~ 67 (156)
T 1k2e_A 2 IVTSGVLVEN-------------GKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGF-TYGIIDEN 67 (156)
T ss_dssp EEEEEECEET-------------TEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCC-CCCCBSSS
T ss_pred eEEEEEEEEC-------------CEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccc-eeeecccc
Confidence 5677888763 269999988778999999999999999999999999999999876554 32111
Q ss_pred -------------EeeCCCCc-eEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 117 -------------FKSRAHNT-DYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 117 -------------~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
+....... .....+|.+.... .+..+++|++++++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-------~e~~~~~W~~~~el~~ 118 (156)
T 1k2e_A 68 AVERPMPLVILEEVVKYPEETHIHFDLIYLVKRVG-------GDLKNGEWIDVREIDR 118 (156)
T ss_dssp EEECCCCSEEEEEEEECSSCEEEEEEEEEEEEEEE-------ECCCSCEEEEGGGGGG
T ss_pred cccccccceeeeeeecCCCCceEEEEEEEEEEecC-------CcEeeeEEeCHHHHhc
Confidence 01111111 2233456655321 2356899999999864
No 41
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.79 E-value=1.6e-18 Score=123.91 Aligned_cols=95 Identities=20% Similarity=0.142 Sum_probs=69.1
Q ss_pred eEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeece-eeeEEEEeeCCCCceEEEEEEEEEecc
Q 031232 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE-LLGEWNFKSRAHNTDYQGYMFPLLVQD 137 (163)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~-~l~~~~~~~~~~~~~~~~~~f~~~~~~ 137 (163)
++|||++|... |.|.||||++++||++.+||.||++||||+.+..... .++.+.+.. .......++|.+....
T Consensus 20 ~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 97 (144)
T 3r03_A 20 GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSY--DTFHLLMPLYACRSWR 97 (144)
T ss_dssp SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC--SSSEEEEEEEEECCCB
T ss_pred CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccC--CCeEEEEEEEEEEecC
Confidence 46999998753 7899999999999999999999999999999876543 133333332 3345666778776554
Q ss_pred ccCCCCcCcceeEEEEecCCCccC
Q 031232 138 QLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 138 ~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.. ....+..+++|++++++...
T Consensus 98 ~~--~~~~e~~~~~W~~~~el~~~ 119 (144)
T 3r03_A 98 GR--ATAREGQTLAWVRAERLREY 119 (144)
T ss_dssp SC--CCCCSSCEEEEECGGGGGGS
T ss_pred Cc--cCCCCcceEEEEeHHHhccC
Confidence 32 12334578999999987653
No 42
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.78 E-value=7e-19 Score=126.99 Aligned_cols=107 Identities=20% Similarity=0.084 Sum_probs=68.1
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeE
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~ 114 (163)
+.+|++++++. +++|||+++++. +.|.||||++|+|||+++||+||++||||+.+..... ++.
T Consensus 5 ~~~v~vi~~~~------------~~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~-l~~ 71 (145)
T 2w4e_A 5 PRAVFILPVTA------------QGEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVP-LPG 71 (145)
T ss_dssp CEEEEEEEEET------------TSEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEE-CCC
T ss_pred CCEEEEEEEcC------------CCEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEE-Eec
Confidence 34667777653 236888876432 3699999999999999999999999999999876665 654
Q ss_pred EEEeeCCCCceEEEEEEEEE-eccccCCCCcCcceeEEEEecCCCcc
Q 031232 115 WNFKSRAHNTDYQGYMFPLL-VQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~-~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
+.. .... .....++|.+. ........++.+..+++|++++++..
T Consensus 72 ~~~-~~~~-~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~ 116 (145)
T 2w4e_A 72 FYP-QPSI-SGVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYR 116 (145)
T ss_dssp BBS-CTTT-CCCEEEEEEEEEEEEC--------CEEEEEEEHHHHHH
T ss_pred CcC-CCCc-cCceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHH
Confidence 322 1111 12234555554 22221222344557999999987653
No 43
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.78 E-value=1.7e-18 Score=126.11 Aligned_cols=95 Identities=18% Similarity=0.092 Sum_probs=68.7
Q ss_pred eEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeece-eeeEEEEeeCCCCceEEEEEEEEEecc
Q 031232 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE-LLGEWNFKSRAHNTDYQGYMFPLLVQD 137 (163)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~-~l~~~~~~~~~~~~~~~~~~f~~~~~~ 137 (163)
++|||++|... |.|.||||++++||++.+||.||++||||+.+..... .++.+.+.. .......++|.+....
T Consensus 41 ~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 118 (158)
T 3hhj_A 41 NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGY--ETFHLLMPLYFCSHYK 118 (158)
T ss_dssp SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC--SSCEEEEEEEEESCCB
T ss_pred CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeecc--CCcEEEEEEEEEEECC
Confidence 47999998753 6899999999999999999999999999999876543 133333333 2335566777775543
Q ss_pred ccCCCCcCcceeEEEEecCCCccC
Q 031232 138 QLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 138 ~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.. ....+..+++|++++++...
T Consensus 119 ~~--~~~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 119 GV--AQGREGQNLKWIFINDLDKY 140 (158)
T ss_dssp SC--CCCTTSCEEEEEEGGGGGGS
T ss_pred Cc--cCCccccceEEEcHHHHhhC
Confidence 31 22334578999999987653
No 44
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.78 E-value=6.8e-20 Score=131.70 Aligned_cols=107 Identities=15% Similarity=0.196 Sum_probs=71.0
Q ss_pred EEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEee
Q 031232 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKS 119 (163)
Q Consensus 40 ~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~ 119 (163)
.++++++++. +.++|||+++...+.|.||||++++|||+++||+||++||||+.+..... +..+....
T Consensus 5 ~~~~~~i~~~-----------~~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~-~~~~~~~~ 72 (146)
T 2jvb_A 5 PVRGAAIFNE-----------NLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYID-DNQFIERN 72 (146)
T ss_dssp CCEEEEEBCT-----------TSSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSC-SSCEEEEE
T ss_pred EEEEEEEEeC-----------CCCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcc-cccccccc
Confidence 4566777753 23589999988778999999999999999999999999999999765433 33332221
Q ss_pred CCCCceEEEEEEEEE-eccc--cCCCCcCcceeEEEEecCCCccC
Q 031232 120 RAHNTDYQGYMFPLL-VQDQ--LAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 120 ~~~~~~~~~~~f~~~-~~~~--~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
. .+.. .++|.+. .... ....++.+..+++|++++++...
T Consensus 73 ~-~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 114 (146)
T 2jvb_A 73 I-QGKN--YKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKT 114 (146)
T ss_dssp E-TTEE--EEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTG
T ss_pred c-CCce--EEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhh
Confidence 1 1212 2333332 2211 11223445689999999987653
No 45
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.77 E-value=5e-19 Score=145.83 Aligned_cols=122 Identities=20% Similarity=0.201 Sum_probs=83.4
Q ss_pred eEEEEEEEEEeecCc-----------ccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeee
Q 031232 39 RQVVGCIPYRYKCVK-----------QSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIV 107 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~-----------~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~ 107 (163)
..++|+|+|+..... .+..+.+++.+|||+++...+.|.||||++|+|||+++||+||++||||+.+..
T Consensus 3 ~~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~ 82 (364)
T 3fjy_A 3 LEAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKL 82 (364)
T ss_dssp CCEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEE
T ss_pred ccccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeee
Confidence 357899999974210 011223567899999998778999999999999999999999999999999887
Q ss_pred eceeeeEEEEeeCCCC-----------ceEEEEEEEEEecccc-----------C-CCCcCcceeEEEEecCCCccC
Q 031232 108 ECELLGEWNFKSRAHN-----------TDYQGYMFPLLVQDQL-----------A-EWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 108 ~~~~l~~~~~~~~~~~-----------~~~~~~~f~~~~~~~~-----------~-~~~~~e~~~~~W~~~~e~~~~ 161 (163)
... ++.+.+.....+ .....++|.+...... . ...+++..+++|++++++...
T Consensus 83 ~~~-l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~ 158 (364)
T 3fjy_A 83 GPY-LCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKI 158 (364)
T ss_dssp EEE-EEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHH
T ss_pred ccc-cceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHH
Confidence 776 776555443211 1345567777655431 0 122345689999999987643
No 46
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.77 E-value=1.9e-18 Score=128.40 Aligned_cols=95 Identities=23% Similarity=0.293 Sum_probs=69.5
Q ss_pred eEEEEEEEcCC-----CCEEe-cCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEec
Q 031232 63 LEVLVISSQKG-----KGMLF-PKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQ 136 (163)
Q Consensus 63 ~~vLLv~r~~~-----~~W~l-PGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~ 136 (163)
++|||.+|... |.|.| |||++++|||+++||+||++||||+.+..... ++.+.+... ......++|.+...
T Consensus 49 ~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~--~~~~~~~~f~~~~~ 125 (180)
T 2fkb_A 49 GKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE-HGQFYFEDK--NCRVWGALFSCVSH 125 (180)
T ss_dssp SCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEE-EEEEEEEET--TEEEEEEEEEEECC
T ss_pred CEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEE-EEEEEecCC--CceEEEEEEEEecC
Confidence 36999887642 57999 99999999999999999999999998766666 776665443 23455677777643
Q ss_pred cccCCCCcCcceeEEEEecCCCccC
Q 031232 137 DQLAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 137 ~~~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.. ......+..+++|++++++...
T Consensus 126 ~~-~~~~~~E~~~~~W~~~~el~~~ 149 (180)
T 2fkb_A 126 GP-FALQEDEVSEVCWLTPEEITAR 149 (180)
T ss_dssp CC-CCCCTTTEEEEEEECHHHHHTT
T ss_pred CC-cCCChhHhheEEEecHHHHHHH
Confidence 22 2223445678999999887653
No 47
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.76 E-value=4.5e-18 Score=129.36 Aligned_cols=95 Identities=18% Similarity=0.001 Sum_probs=68.5
Q ss_pred EEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEecccc
Q 031232 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL 139 (163)
Q Consensus 64 ~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 139 (163)
+|||+++.+. +.|.||||++|+|||+++||+||++||||+.+..... ++.+....... ....++|.+......
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~-l~~~~~~~~~~--~~~~~~f~a~~~~~~ 137 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTF-LKKLSMAPSYF--SSKMNIVVAQDLYPE 137 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEECCTTTC--CCEEEEEEEEEEEEC
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEE-EEEEeCCCCcc--CcEEEEEEEEeCCcc
Confidence 7999987543 3699999999999999999999999999999887776 77665332222 223455666543322
Q ss_pred -CCCCcCcceeEEEEecCCCccC
Q 031232 140 -AEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 140 -~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
....+.+..++.|++++++...
T Consensus 138 ~~~~~~~E~~~~~w~~~~el~~~ 160 (198)
T 1vhz_A 138 SLEGDEPEPLPQVRWPLAHMMDL 160 (198)
T ss_dssp CCCCCCSSCCCEEEEEGGGGGGG
T ss_pred cCCCCCCceEEEEEEEHHHHHHH
Confidence 1223344578999999998764
No 48
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.76 E-value=1e-17 Score=133.42 Aligned_cols=94 Identities=14% Similarity=0.025 Sum_probs=71.5
Q ss_pred eEEEEEEEcC--CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEeccccC
Q 031232 63 LEVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA 140 (163)
Q Consensus 63 ~~vLLv~r~~--~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 140 (163)
++|||+++.. .|.|.+|||++|+|||+++||+||++||||+++..... ++.+.+... ....++|.+.......
T Consensus 151 ~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~-~~~~~~~~~----~~~~~~f~a~~~~~~~ 225 (269)
T 1vk6_A 151 DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRY-VTSQPWPFP----QSLMTAFMAEYDSGDI 225 (269)
T ss_dssp TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEE-EEEEEEETT----EEEEEEEEEEEEECCC
T ss_pred CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEE-EEEEecCCC----CEEEEEEEEEECCCCc
Confidence 3799999876 37899999999999999999999999999999987777 776654432 2345667776554322
Q ss_pred CCCcCcceeEEEEecCCCccC
Q 031232 141 EWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 141 ~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.....+..+++|++++++...
T Consensus 226 ~~~~~E~~~~~W~~~~el~~l 246 (269)
T 1vk6_A 226 VIDPKELLEANWYRYDDLPLL 246 (269)
T ss_dssp CCCTTTEEEEEEEETTSCCSC
T ss_pred CCCCcceEEEEEEEHHHhhhc
Confidence 222345689999999998653
No 49
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.76 E-value=1.3e-18 Score=131.11 Aligned_cols=109 Identities=18% Similarity=0.103 Sum_probs=77.8
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC-----CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeecee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECEL 111 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~ 111 (163)
..+..+++|+++. +++.+|||++|.. .|.|.||||++++|||+++||+||++||||+.+.....
T Consensus 32 ~~~~~~~~v~i~~----------~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~- 100 (194)
T 1nqz_A 32 HYRRAAVLVALTR----------EADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTL- 100 (194)
T ss_dssp -CEEEEEEEEEES----------SSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEE-
T ss_pred CCceEEEEEEEec----------CCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEE-
Confidence 4566777777743 2334799999864 37899999999999999999999999999999876666
Q ss_pred eeEEEEeeCCCCceEEEEEEEEEecccc--CCCCcCcceeEEEEecCCC
Q 031232 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQL--AEWPEKNVRSRKWVCTFMP 158 (163)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~~~~e~ 158 (163)
++.+.+..... ....++|.+.+.... ......+..+++|++++++
T Consensus 101 l~~~~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el 147 (194)
T 1nqz_A 101 LGELDDVFTPV--GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAEL 147 (194)
T ss_dssp EEECCCEEETT--TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHH
T ss_pred EEEccCccCCC--CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHh
Confidence 66655443322 245567777665322 2233445689999999887
No 50
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.76 E-value=5.3e-18 Score=120.48 Aligned_cols=92 Identities=16% Similarity=0.115 Sum_probs=68.7
Q ss_pred EEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEecccc
Q 031232 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL 139 (163)
Q Consensus 64 ~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 139 (163)
+|||++|... |.|.||||++++|||+++||.||++||||+.+..... ++.+.+.... .....++|.+......
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~ 97 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEY-VASHQREVSG--RIIHLHAWHVPDFHGT 97 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEE-EEEEEEEETT--EEEEEEEEEESEEEEC
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccE-EEEEEEecCC--cEEEEEEEEEEeeCCC
Confidence 7999988652 7899999999999999999999999999999877666 7776555432 2345567776544321
Q ss_pred CCCCcCcceeEEEEecCCCcc
Q 031232 140 AEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 140 ~~~~~~e~~~~~W~~~~e~~~ 160 (163)
. ...+..+++|++++++..
T Consensus 98 ~--~~~e~~~~~W~~~~el~~ 116 (140)
T 2rrk_A 98 L--QAHEHQALVWCSPEEALQ 116 (140)
T ss_dssp C--CCSSCSCEEEECHHHHTT
T ss_pred c--CCCccceeEEeCHHHHhh
Confidence 1 223456899999988654
No 51
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.76 E-value=2.4e-18 Score=133.17 Aligned_cols=134 Identities=14% Similarity=0.010 Sum_probs=73.9
Q ss_pred cccccccccccccCCCcccccCCCCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC---------------------
Q 031232 14 VTPENVVGNLVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK--------------------- 72 (163)
Q Consensus 14 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~--------------------- 72 (163)
+++-.........+|+...+.--...-+|++|+++. ++.++||+++.+
T Consensus 11 ~~~~~~~~~~~~~~G~~~~~e~v~~~~aV~vl~~~~-----------~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~ 79 (218)
T 3q91_A 11 VDLGTENLYFQSMNGAQKSWDFMKTHDSVTVLLFNS-----------SRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQ 79 (218)
T ss_dssp ------------------------CCCEEEEEEEEG-----------GGTEEEEEEEECHHHHHHHTC------------
T ss_pred cccceeEEEEECCCCCEEEEEEEEcCCeEEEEEEEC-----------CCCEEEEEEcccccccccccccccccccccccc
Confidence 334333444455667665443334456777888864 234799998754
Q ss_pred --------------CCCEEecCcccCC-CCCHHHHHHHHHHHHhCCee--eeeceeeeEEEEeeCCCCceEEEEEEEEEe
Q 031232 73 --------------GKGMLFPKGGWEI-DESIQEAALRETIEEAGVTG--IVECELLGEWNFKSRAHNTDYQGYMFPLLV 135 (163)
Q Consensus 73 --------------~~~W~lPGG~ve~-gEs~~eaA~REl~EEtGl~~--~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~ 135 (163)
.+.|+||||++|+ |||+++||+||++||||+.+ ..... ++.+...... .....++|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~-l~~~~~~~g~--~~~~~~~f~a~~ 156 (218)
T 3q91_A 80 DGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRR-VATYWSGVGL--TGSRQTMFYTEV 156 (218)
T ss_dssp -------------CCEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEE-EEEEEEC-----CCEEEEEEEEEE
T ss_pred ccccccccccccCCCeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEE-EEEEecCCCc--cceEEEEEEEEE
Confidence 3469999999999 99999999999999999998 44444 6654332221 224556777765
Q ss_pred cccc------CCCCcCcceeEEEEecCCCccC
Q 031232 136 QDQL------AEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 136 ~~~~------~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.... ....+.|..++.|++++++...
T Consensus 157 ~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~~ 188 (218)
T 3q91_A 157 TDAQRSGPGGGLVEEGELIEVVHLPLEGAQAF 188 (218)
T ss_dssp CGGGBCC---------CCEEEEEEEGGGHHHH
T ss_pred CCcccccCCCCCCCCCcEEEEEEEEHHHHHHH
Confidence 5321 1222345689999999987653
No 52
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.75 E-value=2.4e-18 Score=129.37 Aligned_cols=108 Identities=13% Similarity=0.095 Sum_probs=75.8
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcC-----CCCEEe-cCcccCCCCCHHHHHHHHHHHHhCCeeeee-cee
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLF-PKGGWEIDESIQEAALRETIEEAGVTGIVE-CEL 111 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~l-PGG~ve~gEs~~eaA~REl~EEtGl~~~~~-~~~ 111 (163)
..+|++++++. +++|||++|.. .|.|.+ |||++++|||+++||+||++||||+.+... ..
T Consensus 32 ~~~v~~~i~~~------------~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~- 98 (190)
T 1hzt_A 32 HLAFSSWLFNA------------KGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESI- 98 (190)
T ss_dssp EECEEEEEECT------------TCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEE-
T ss_pred EEEEEEEEEcC------------CCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhhee-
Confidence 35666667653 23699998864 378999 999999999999999999999999998765 44
Q ss_pred eeEEEEeeCCC-C--ceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 112 LGEWNFKSRAH-N--TDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 112 l~~~~~~~~~~-~--~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
++.+.+..... . .....++|.+...... .....+..+++|++++++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~el~~ 149 (190)
T 1hzt_A 99 YPDFRYRATDPSGIVENEVCPVFAARTTSAL-QINDDEVMDYQWCDLADVLH 149 (190)
T ss_dssp ETTCEEEEECTTSCEEEEECCEEEEEBCSCC-CCCTTTEEEEEEECHHHHHH
T ss_pred eeeEEEEeeCCCCCcceEEEEEEEEecCCCC-cCCccceeeEEEecHHHHHH
Confidence 55555432211 1 2345567777655422 22334568999999987654
No 53
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.75 E-value=1.1e-18 Score=130.16 Aligned_cols=121 Identities=18% Similarity=0.087 Sum_probs=78.6
Q ss_pred ccCCCc-ccccCCCCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC----CCCEEecCcccCCCCCHHHHHHHHHHH
Q 031232 25 SRTGRH-LQRYQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK----GKGMLFPKGGWEIDESIQEAALRETIE 99 (163)
Q Consensus 25 ~~~g~~-~~~~~~~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~----~~~W~lPGG~ve~gEs~~eaA~REl~E 99 (163)
...|+. ..++-...+.+|++++++. +++|||+++.. .+.|.||||++++|||+++||+||++|
T Consensus 26 ~~~g~~~~~~~~~~~~~~v~v~i~~~------------~~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~E 93 (182)
T 2yvp_A 26 THTGRELTYVYRPGPVAASFVLPVTE------------RGTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELRE 93 (182)
T ss_dssp CTTSCEEEEEEBCSSCEEEEEEEBCT------------TSEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHH
T ss_pred CCCCCEeeEEEEEecCCEEEEEEEcC------------CCEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHH
Confidence 345554 2222223345666666643 24799998864 367999999999999999999999999
Q ss_pred HhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEecc--ccCCCCcCcceeEEEEecCCCcc
Q 031232 100 EAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQD--QLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 100 EtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
|||+.+..... ++.+.... .......++|.+.... .....+..+..+++|++++++..
T Consensus 94 EtGl~~~~~~~-l~~~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 153 (182)
T 2yvp_A 94 EVGAEAETLIP-LPSFHPQP--SFTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYA 153 (182)
T ss_dssp HHCEECSCEEE-CCCBCSCT--TTBCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHH
T ss_pred HhCCCcccEEE-EEEEeCCC--CccccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHH
Confidence 99999876665 66543221 1223345666665322 11122344568999999987654
No 54
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.75 E-value=9.6e-19 Score=127.44 Aligned_cols=113 Identities=21% Similarity=0.252 Sum_probs=72.9
Q ss_pred CCCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceee--
Q 031232 36 KGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELL-- 112 (163)
Q Consensus 36 ~~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l-- 112 (163)
..++.+|++++++. +++|||++|.. .+.|.+|||++++|||+++||+||++||||+.+.......
T Consensus 11 ~~~~~~v~~~i~~~------------~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~ 78 (165)
T 1f3y_A 11 EGYRRNVGICLMNN------------DKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPY 78 (165)
T ss_dssp SSCCCEEEEEEECT------------TSCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSS
T ss_pred cceeeeEEEEEECC------------CCcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhccccc
Confidence 35678888888853 24799999875 3789999999999999999999999999999864322101
Q ss_pred -eEEEEeeC----------CCCceEEEEEEEEEecccc-CCC------CcCcceeEEEEecCCCcc
Q 031232 113 -GEWNFKSR----------AHNTDYQGYMFPLLVQDQL-AEW------PEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 113 -~~~~~~~~----------~~~~~~~~~~f~~~~~~~~-~~~------~~~e~~~~~W~~~~e~~~ 160 (163)
..+.+... ........++|.+.+.... ... ++.+..+++|++++++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 144 (165)
T 1f3y_A 79 WLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLID 144 (165)
T ss_dssp CCBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHH
T ss_pred ceeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHH
Confidence 11111100 0000113356666654321 111 234568999999988755
No 55
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.74 E-value=2.5e-17 Score=132.43 Aligned_cols=124 Identities=15% Similarity=0.030 Sum_probs=80.0
Q ss_pred CCeEEEEEEEEEeecC--cccccc---cCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCCee------
Q 031232 37 GRRQVVGCIPYRYKCV--KQSLDI---NEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTG------ 105 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~--~~~~~~---~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~------ 105 (163)
++..++++|+.+.+.+ +..... ..+..+|||++|...|.|.||||+|++|||+++||+||++||||+.+
T Consensus 108 gp~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~ 187 (292)
T 1q33_A 108 GPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAE 187 (292)
T ss_dssp EEEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSH
T ss_pred CccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCcccccccc
Confidence 5678999999876311 110000 12457899999988899999999999999999999999999999983
Q ss_pred ------eeeceee---eE--EEEeeCCCC----ceEEEEEEEEEeccc-----cCCCCcCcceeEEEEecCCCccC
Q 031232 106 ------IVECELL---GE--WNFKSRAHN----TDYQGYMFPLLVQDQ-----LAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 106 ------~~~~~~l---~~--~~~~~~~~~----~~~~~~~f~~~~~~~-----~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
..... + +. |........ ......+|.+..... ....+.++..+++|++++++..+
T Consensus 188 ~~~l~~~l~~l-~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L 262 (292)
T 1q33_A 188 KREIEEKLHKL-FSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL 262 (292)
T ss_dssp HHHHHHHHHHH-TTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC
T ss_pred chhhHHHHHHH-hhcccceeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc
Confidence 11222 2 22 221211111 144555666554321 11233445689999999998753
No 56
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.74 E-value=8.7e-18 Score=128.80 Aligned_cols=110 Identities=15% Similarity=0.071 Sum_probs=71.7
Q ss_pred EEEEEEEEEeecCcccccccCCceEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEE
Q 031232 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW 115 (163)
Q Consensus 40 ~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~ 115 (163)
-+|+++++..++ ++..+|||+++.+. +.|.||||++++|||+++||+||++||||+.+..... ++.+
T Consensus 62 ~av~v~~v~~~~--------~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~-l~~~ 132 (212)
T 2dsc_A 62 DGVAVIPVLQRT--------LHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAEC-SPAV 132 (212)
T ss_dssp SEEEEEEEEECT--------TSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE-CCCE
T ss_pred CEEEEEEEEeCC--------CCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEE-eccE
Confidence 355666555431 12457999986432 4699999999999999999999999999999877666 5544
Q ss_pred EEeeCCCCceEEEEEEEEEeccc-------cCCCCcCcceeEEEEecCCCcc
Q 031232 116 NFKSRAHNTDYQGYMFPLLVQDQ-------LAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~~-------~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
........ ...++|.+.+... .....+.+..++.|++++++..
T Consensus 133 ~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~ 182 (212)
T 2dsc_A 133 CMDPGLSN--CTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 182 (212)
T ss_dssp ESCTTTBC--CEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHH
T ss_pred EcCCCccC--ceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHH
Confidence 22211112 2334555543221 1112234558999999998764
No 57
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.73 E-value=4.3e-18 Score=128.64 Aligned_cols=107 Identities=14% Similarity=0.008 Sum_probs=72.4
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcC----------CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeee
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK----------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVE 108 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~----------~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~ 108 (163)
..+|+++++.. +++++||+++.+ .+.|.||||+++ |||+++||+||++||||+.+...
T Consensus 45 ~~av~v~~~~~-----------~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~ 112 (191)
T 3o6z_A 45 GNGATILLYNT-----------KKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEV 112 (191)
T ss_dssp CCEEEEEEEET-----------TTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCE
T ss_pred CCEEEEEEEEC-----------CCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcE
Confidence 34566666653 345899998763 357999999999 99999999999999999998766
Q ss_pred ceeeeEEEEeeCCCCceEEEEEEEEEeccccC----CCCcCcceeEEEEecCCCcc
Q 031232 109 CELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA----EWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 109 ~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~----~~~~~e~~~~~W~~~~e~~~ 160 (163)
.. ++.+..... ......++|.+....... ...+.+..+++|++++++..
T Consensus 113 ~~-l~~~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~ 165 (191)
T 3o6z_A 113 RK-LFELYMSPG--GVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALE 165 (191)
T ss_dssp EE-EEEEESCTT--TBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHH
T ss_pred EE-EEEEEeCCC--ccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHH
Confidence 66 665433221 122345677776543211 11244568999999998754
No 58
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.73 E-value=2.5e-18 Score=120.44 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=69.5
Q ss_pred eEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEeccc
Q 031232 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQ 138 (163)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~ 138 (163)
++|||++|... |.|.||||++++|||+.+||.||++||||+.+..... ++.+.+... ......++|.+.....
T Consensus 16 ~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~ 92 (129)
T 1mut_A 16 NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSL-FEKLEYEFP--DRHITLWFWLVERWEG 92 (129)
T ss_dssp TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECC-CCCCBCCCS--SCEEECCCEEEEECSS
T ss_pred CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceE-EEEEEEecC--CceEEEEEEEEEccCC
Confidence 47999998764 7899999999999999999999999999999877666 665543332 2234456777765432
Q ss_pred cCCCCcCcceeEEEEecCCCccC
Q 031232 139 LAEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 139 ~~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.. ...+..+++|++++++...
T Consensus 93 ~~--~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 93 EP--WGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp CC--CCCSSCCCEEEESSSCCTT
T ss_pred cc--CCcccceeEEeCHHHcccc
Confidence 21 2234568999999998653
No 59
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.73 E-value=9.4e-18 Score=123.92 Aligned_cols=105 Identities=20% Similarity=0.147 Sum_probs=70.2
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcC----CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeE
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~----~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~ 114 (163)
+.+|++++++ + +++||+++.+ .+.|.||||++++|||+++||.||++||||+ +..... ++.
T Consensus 34 ~~~v~vii~~-~------------~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~-l~~ 98 (170)
T 1v8y_A 34 KPAVAVIALR-E------------GRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTY-LFS 98 (170)
T ss_dssp CCEEEEEEEE-T------------TEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEE-EEE
T ss_pred CCeEEEEEEE-C------------CEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCcee-eEE
Confidence 3577777776 3 2699998754 2679999999999999999999999999999 776666 665
Q ss_pred EEEeeCCCCceEEEEEEEEEeccccC-CCCcCcceeEEEEecCCCcc
Q 031232 115 WNFKSRAHNTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~e~~~ 160 (163)
+..... ......++|.+....... ...+.+..+++|++++++..
T Consensus 99 ~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 143 (170)
T 1v8y_A 99 YFVSPG--FTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALE 143 (170)
T ss_dssp EESCTT--TBCCEEEEEEEEEEEECC--------CEEEEECHHHHHH
T ss_pred EecCCC--ccccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHH
Confidence 532221 122345566665433222 22334557999999987654
No 60
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.72 E-value=9.3e-18 Score=123.69 Aligned_cols=105 Identities=14% Similarity=0.130 Sum_probs=72.0
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcC-----CCCEE-ecCcccCCCCCHHHHHHHHHHHHhCCeeeeece-e
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGML-FPKGGWEIDESIQEAALRETIEEAGVTGIVECE-L 111 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~-lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~-~ 111 (163)
..++++++++. +++|||++|.. .|.|. +|||++++|||+.+||+||++||||+.+..... .
T Consensus 34 ~~~v~v~i~~~------------~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~ 101 (171)
T 1q27_A 34 VRVVNAFLRNS------------QGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRP 101 (171)
T ss_dssp CEEEEEEEEET------------TTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEE
T ss_pred ceEEEEEEECC------------CCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEE
Confidence 45666666653 23799998754 37798 999999999999999999999999999766431 1
Q ss_pred eeEEE-EeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCc
Q 031232 112 LGEWN-FKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPV 159 (163)
Q Consensus 112 l~~~~-~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~ 159 (163)
++.+. +... ... ..++|.+..... ......+..+++|++++++.
T Consensus 102 ~~~~~~~~~~--~~~-~~~~f~~~~~~~-~~~~~~E~~~~~W~~~~el~ 146 (171)
T 1q27_A 102 LASFSPFQTT--LSS-FMCVYELRSDAT-PIFNPNDISGGEWLTPEHLL 146 (171)
T ss_dssp EEEECSSSSC--CSS-EEEEEEEECCCC-CCSCTTTCSCCEEECHHHHH
T ss_pred EEEEeccCCC--Ccc-EEEEEEEEECCc-cccCchhhheEEEecHHHHH
Confidence 44443 2222 122 557777766322 12223445789999998765
No 61
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.72 E-value=4e-18 Score=130.26 Aligned_cols=95 Identities=14% Similarity=0.072 Sum_probs=63.8
Q ss_pred eEEEEEEEcCC----CCEEecCcccC-CCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEecc
Q 031232 63 LEVLVISSQKG----KGMLFPKGGWE-IDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQD 137 (163)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPGG~ve-~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~ 137 (163)
++|||+++.+. +.|.||||+++ +|||+++||+||++||||+.+..... ++.+ +..... .....++|.+....
T Consensus 55 ~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~-~~~~~~-~~~~~~~f~~~~~~ 131 (207)
T 1mk1_A 55 GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQV-LVDL-DTAPGF-SDESVRVYLATGLR 131 (207)
T ss_dssp SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEE-EEEE-CSCTTT-BCCCEEEEEEEEEE
T ss_pred CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEE-EEEE-EcCCCc-cccEEEEEEEEccc
Confidence 47999987643 57999999999 99999999999999999999887776 6655 222221 12234566665433
Q ss_pred ccCC---CCcCcceeEEEEecCCCcc
Q 031232 138 QLAE---WPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 138 ~~~~---~~~~e~~~~~W~~~~e~~~ 160 (163)
.... ..+.+..+++|++++++..
T Consensus 132 ~~~~~~~~~~~E~~~~~Wv~~~el~~ 157 (207)
T 1mk1_A 132 EVGRPEAHHEEADMTMGWYPIAEAAR 157 (207)
T ss_dssp ECCC----------CEEEEEHHHHHH
T ss_pred cCCCCCCCCCCceEEEEEEEHHHHHH
Confidence 2211 2234457899999987654
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.72 E-value=7.8e-18 Score=136.53 Aligned_cols=110 Identities=14% Similarity=0.075 Sum_probs=72.9
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeee
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~ 113 (163)
.++.+|++|+++. ++|||++|+. .|.|.+|||++|+|||+++||+||++||||+++..... ++
T Consensus 201 ~~~~~v~~vi~~~-------------~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~ 266 (341)
T 2qjo_A 201 PTFITTDAVVVQA-------------GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVL-RG 266 (341)
T ss_dssp CCEEEEEEEEEET-------------TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHH-HH
T ss_pred CCceEEEEEEEeC-------------CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccc-cc
Confidence 3467788888753 2799999876 47899999999999999999999999999999875443 32
Q ss_pred ----EEEEeeCCC--CceEEEEEEEEEeccccC--CCCcCcceeEEEEecCCCcc
Q 031232 114 ----EWNFKSRAH--NTDYQGYMFPLLVQDQLA--EWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 114 ----~~~~~~~~~--~~~~~~~~f~~~~~~~~~--~~~~~e~~~~~W~~~~e~~~ 160 (163)
...+..... ......++|.+....... ..++.+..+++|++++++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 321 (341)
T 2qjo_A 267 SIVDSHVFDAPGRSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYA 321 (341)
T ss_dssp TEEEEEEECCTTSCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHH
T ss_pred cccceEEEeCCCCCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhh
Confidence 222322221 223445667666543221 12334567899999988764
No 63
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.72 E-value=4.2e-18 Score=131.13 Aligned_cols=111 Identities=15% Similarity=-0.029 Sum_probs=75.5
Q ss_pred CCCCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCC-------CCEEe-cCcccCCCCC--H----HHHHHHHHHHH
Q 031232 35 QKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-------KGMLF-PKGGWEIDES--I----QEAALRETIEE 100 (163)
Q Consensus 35 ~~~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~-------~~W~l-PGG~ve~gEs--~----~eaA~REl~EE 100 (163)
+..+++.+..+++..+ ++|||++|... +.|.+ |||+||+||| + ++||+||++||
T Consensus 63 d~~~~q~i~~~II~~~------------grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EE 130 (211)
T 3e57_A 63 DETTKQVIPYVVIMDG------------DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEE 130 (211)
T ss_dssp CTTEEEEEEEEEEEET------------TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHH
T ss_pred CCcccceEEEEEEEEC------------CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHH
Confidence 3456666666666542 37999998643 57999 9999999999 5 99999999999
Q ss_pred hCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 101 AGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 101 tGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
||+++..... +|.+.+........+..++|.+....... .+.+..+++|++++++..
T Consensus 131 tGl~v~~~~~-ig~~~~~~~~~~~~~l~~~f~~~~~~g~~--~~~E~~~~~W~~~~eL~~ 187 (211)
T 3e57_A 131 VDVSLRELEF-LGLINSSTTEVSRVHLGALFLGRGKFFSV--KEKDLFEWELIKLEELEK 187 (211)
T ss_dssp EEEEEEEEEE-EEEEECCSSHHHHTEEEEEEEEEEEEEEE--SCTTTCEEEEEEHHHHHH
T ss_pred hCCeeeccEE-EEEEeccCCCCCeEEEEEEEEEEeCCcee--CCCCeEEEEEEEHHHHHH
Confidence 9999887777 78776532211223445678777653322 234457899999987654
No 64
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.71 E-value=9.3e-18 Score=128.62 Aligned_cols=107 Identities=20% Similarity=0.077 Sum_probs=72.0
Q ss_pred EEEEEEEEEeecCcccccccCCceEEEEEEEcCC---------CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeece
Q 031232 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---------KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE 110 (163)
Q Consensus 40 ~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~---------~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~ 110 (163)
.+|++++++. ++++|||+++.+. +.|.||||++|+|||+++||+||++||||+.+.....
T Consensus 58 ~av~vl~~~~-----------~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~ 126 (209)
T 1g0s_A 58 HAAVLLPFDP-----------VRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKP 126 (209)
T ss_dssp CEEEEEEEET-----------TTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEE
T ss_pred CEEEEEEEEC-----------CCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEE
Confidence 4666777753 2347999987542 3599999999999999999999999999999876666
Q ss_pred eeeEEEEeeCCCCceEEEEEEEEEeccc-c-C---CCCcCcceeEEEEecCCCcc
Q 031232 111 LLGEWNFKSRAHNTDYQGYMFPLLVQDQ-L-A---EWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 111 ~l~~~~~~~~~~~~~~~~~~f~~~~~~~-~-~---~~~~~e~~~~~W~~~~e~~~ 160 (163)
++.+. ..... .....++|.+..... . . ...+.+..++.|++++++..
T Consensus 127 -l~~~~-~~~g~-~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~ 178 (209)
T 1g0s_A 127 -VLSFL-ASPGG-TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQ 178 (209)
T ss_dssp -EEEEE-SCTTT-BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHH
T ss_pred -eEEEe-cCCCc-cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHH
Confidence 66652 22221 123456677765321 1 1 12334457899999998754
No 65
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.70 E-value=1.3e-17 Score=132.74 Aligned_cols=107 Identities=21% Similarity=0.207 Sum_probs=70.1
Q ss_pred EEEEEEEEEeecCcccccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEe
Q 031232 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK 118 (163)
Q Consensus 40 ~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~ 118 (163)
.++++|+++. +.++|||+++.. .+.|.+|||++++|||+++||+||++||||+++..... ++.|...
T Consensus 102 ~~v~avv~~~-----------~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~-~~~~~~~ 169 (271)
T 2a6t_A 102 PVRGAIMLDM-----------SMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRIN-PNEFIDM 169 (271)
T ss_dssp CEEEEEEBCS-----------SSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCC-TTCEEEE
T ss_pred CeEEEEEEEC-----------CCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeee-eeeeccC
Confidence 4667777764 234899999865 47899999999999999999999999999999765433 3323211
Q ss_pred eCCCCceEEEEEEEEEecccc---CCCCcCcceeEEEEecCCCccC
Q 031232 119 SRAHNTDYQGYMFPLLVQDQL---AEWPEKNVRSRKWVCTFMPVTC 161 (163)
Q Consensus 119 ~~~~~~~~~~~~f~~~~~~~~---~~~~~~e~~~~~W~~~~e~~~~ 161 (163)
.. .. ...++|.+...... ....+.+..+++|++++++...
T Consensus 170 ~~-~~--~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 212 (271)
T 2a6t_A 170 TI-RG--QNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTF 212 (271)
T ss_dssp EE-TT--EEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTC
T ss_pred Cc-CC--ceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHH
Confidence 11 11 13345555433211 1123445688999999998653
No 66
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.69 E-value=7.2e-17 Score=131.61 Aligned_cols=110 Identities=16% Similarity=0.106 Sum_probs=73.5
Q ss_pred CeEEEEEEEEEeecCcccccccCCceEEEEEEEcCC---CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeece---e
Q 031232 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE---L 111 (163)
Q Consensus 38 ~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~---~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~---~ 111 (163)
...+|++|+++. ++|||++++.. +.|.+|||++|+|||+++||+||++||||+++..... .
T Consensus 207 ~~~~v~~vv~~~-------------~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~ 273 (352)
T 2qjt_B 207 NFVTVDALVIVN-------------DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAK 273 (352)
T ss_dssp EEEEEEEEEEET-------------TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHE
T ss_pred CceEEEEEEEEC-------------CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhccee
Confidence 356777777743 27999998763 7899999999999999999999999999999764332 0
Q ss_pred eeEEEEeeCCC--CceEEEEEEEEEecccc--C-CCCcCcceeEEEEec-CCCcc
Q 031232 112 LGEWNFKSRAH--NTDYQGYMFPLLVQDQL--A-EWPEKNVRSRKWVCT-FMPVT 160 (163)
Q Consensus 112 l~~~~~~~~~~--~~~~~~~~f~~~~~~~~--~-~~~~~e~~~~~W~~~-~e~~~ 160 (163)
.+...+..... ......++|.+.+.... . ..++.+..+++|+++ +++..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~ 328 (352)
T 2qjt_B 274 RCEKVFDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKN 328 (352)
T ss_dssp EEEEEECCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHH
T ss_pred eeeEEecCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHh
Confidence 12222322221 22344556666554322 1 123455689999999 77654
No 67
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.67 E-value=2e-16 Score=114.83 Aligned_cols=109 Identities=18% Similarity=0.209 Sum_probs=73.4
Q ss_pred CeEEEEEEEEEeecCcccccccCCceEEEEEEEcCC----CCEEecCcccCCCCCHH-HHHHHHHHHHhC-Ceeeeecee
Q 031232 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWEIDESIQ-EAALRETIEEAG-VTGIVECEL 111 (163)
Q Consensus 38 ~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~----~~W~lPGG~ve~gEs~~-eaA~REl~EEtG-l~~~~~~~~ 111 (163)
++..+.+|+++.. +.+++|||++|... |.|.||||++++||+++ +||.||++|||| +.+.....
T Consensus 18 ~~~~~~~vi~~~~---------~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~- 87 (155)
T 1x51_A 18 EESSATCVLEQPG---------ALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRH- 87 (155)
T ss_dssp EEEEEEEEEEEEC---------SSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEE-
T ss_pred eEEEEEEEEEecC---------CCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeee-
Confidence 3556666666542 12458999988653 68999999999999996 999999999999 87654444
Q ss_pred eeEEEEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
++.+.+... ......++|.+.+..... . ..+..+++|++++++..
T Consensus 88 l~~~~~~~~--~~~~~~~~~~~~~~~~~~-~-~~e~~~~~W~~~~el~~ 132 (155)
T 1x51_A 88 LGEVVHTFS--HIKLTYQVYGLALEGQTP-V-TTVPPGARWLTQEEFHT 132 (155)
T ss_dssp CCCBCCBCS--SCEEEEEEEEEECSSCCC-C-CCCCTTEEEEEHHHHHH
T ss_pred cceEEEecC--CccEEEEEEEEEEcCCCC-C-CCCCCccEEccHHHhhh
Confidence 554433322 223455677776653221 1 12346789999987643
No 68
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.65 E-value=9.7e-16 Score=117.63 Aligned_cols=117 Identities=12% Similarity=-0.029 Sum_probs=75.8
Q ss_pred eEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCC-CHHHHHHHHHHHHhCCeeeeece----eee
Q 031232 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGVTGIVECE----LLG 113 (163)
Q Consensus 39 ~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gE-s~~eaA~REl~EEtGl~~~~~~~----~l~ 113 (163)
+.++.++++..+. .-.-.+-+++++|||.+| ..+.|.||||++++|| |+++||+||++||||+.+..... .++
T Consensus 33 ~~~~~~~l~~~~~-~vv~~i~~~~~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~ 110 (212)
T 1u20_A 33 KHACHALLHAPSQ-AKLFDRVPIRRVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRS 110 (212)
T ss_dssp EEEEEEEEEEECC-CEETTTEECCEEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEE
T ss_pred cccceEEEeCCCc-eEEEEEEecCCEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEE
Confidence 5566666665421 000111124567888877 4689999999999999 99999999999999999764431 144
Q ss_pred EEEEeeCCCCceEEEEEEEEEeccccC----------CCCcCcceeEEEEecCCCcc
Q 031232 114 EWNFKSRAHNTDYQGYMFPLLVQDQLA----------EWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~----------~~~~~e~~~~~W~~~~e~~~ 160 (163)
.+.+... .....++|.+....... ...+.+..++.|++++++..
T Consensus 111 ~~~~~~~---~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 111 SQVREHP---QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp EEEECTT---SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTT
T ss_pred eccccCC---CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhh
Confidence 4443322 34566788877643211 01223457899999998854
No 69
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=5.3e-15 Score=115.38 Aligned_cols=114 Identities=22% Similarity=0.244 Sum_probs=79.2
Q ss_pred CCeEEEEEEEEEeecCcccccccCCc-eEEEEEEEcCC-----CCEEecCcccCCCCC--------------------HH
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEED-LEVLVISSQKG-----KGMLFPKGGWEIDES--------------------IQ 90 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~-~~vLLv~r~~~-----~~W~lPGG~ve~gEs--------------------~~ 90 (163)
.+|.++.+|+++.. .++ .+|||++|... |.|.||||+||++|+ +.
T Consensus 6 ~~r~aA~lill~~~---------~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~ 76 (232)
T 3qsj_A 6 DIRKAATLVVIRDG---------ANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALA 76 (232)
T ss_dssp CEEEEEEEEEEEEC---------GGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHH
T ss_pred CCcceEEEEEEEcC---------CCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHH
Confidence 46788888988874 223 68999999754 789999999999987 58
Q ss_pred HHHHHHHHHHhCCeeeeece--------------------------------------eeeEEE-E-eeCCCCceEEEEE
Q 031232 91 EAALRETIEEAGVTGIVECE--------------------------------------LLGEWN-F-KSRAHNTDYQGYM 130 (163)
Q Consensus 91 eaA~REl~EEtGl~~~~~~~--------------------------------------~l~~~~-~-~~~~~~~~~~~~~ 130 (163)
.||+||++|||||.+..... .+..+. + .......++...+
T Consensus 77 ~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~F 156 (232)
T 3qsj_A 77 VTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRF 156 (232)
T ss_dssp HHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEE
T ss_pred HHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEE
Confidence 99999999999997432110 011111 1 1112234688889
Q ss_pred EEEEeccccC-CCCcCcceeEEEEecCCCc
Q 031232 131 FPLLVQDQLA-EWPEKNVRSRKWVCTFMPV 159 (163)
Q Consensus 131 f~~~~~~~~~-~~~~~e~~~~~W~~~~e~~ 159 (163)
|.+.+..... .....|..++.|+++.+++
T Consensus 157 Fla~lpq~~~v~~d~~E~~~~~W~~p~eal 186 (232)
T 3qsj_A 157 FLCVGQHLGEPRLHGAELDAALWTPARDML 186 (232)
T ss_dssp EEEECSSCCCCCCCSSSEEEEEEEEHHHHH
T ss_pred EEEECCCCCCCCCCCCceEEEEEEcHHHHH
Confidence 9888773321 3344556899999999885
No 70
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.56 E-value=7.1e-15 Score=113.47 Aligned_cols=93 Identities=13% Similarity=0.034 Sum_probs=62.3
Q ss_pred EEEEEEEcCCCCEEecCcccCCCC-CHHHHHHHHHHHHhCCeeee--eceeeeEEEEeeCCCCceEEEEEEEEEeccccC
Q 031232 64 EVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGVTGIV--ECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA 140 (163)
Q Consensus 64 ~vLLv~r~~~~~W~lPGG~ve~gE-s~~eaA~REl~EEtGl~~~~--~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 140 (163)
++||+.+. .+.|.||||++|+|| |+++||+||++||||+.+.. ... +..+.... ........++|.+.+.....
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~-l~~~~~~~-~~~~~~~~~~f~~~l~~~~~ 142 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVER-TDYRSSHV-GSGPRVVAHFYAKRLTLEEL 142 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCG-GGEEEEEE-CSSSSEEEEEEEEECCHHHH
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEE-EEEEeecC-CCCCeEEEEEEEEEeccccc
Confidence 35665554 578999999999999 99999999999999998763 222 33222211 11124556777777653211
Q ss_pred ----------CCCcCcceeEEEEecCCCc
Q 031232 141 ----------EWPEKNVRSRKWVCTFMPV 159 (163)
Q Consensus 141 ----------~~~~~e~~~~~W~~~~e~~ 159 (163)
...+.+..++.|++++++.
T Consensus 143 ~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 143 LAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp HHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred eecccccccccccCCceeeEEEEEHHHhh
Confidence 1112345789999999876
No 71
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.54 E-value=3.5e-14 Score=117.40 Aligned_cols=89 Identities=11% Similarity=-0.049 Sum_probs=69.5
Q ss_pred eEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHHhCCeeeeeceeeeEEEEeeCCCCceEEEEEEEEEeccc
Q 031232 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQ 138 (163)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~ 138 (163)
++|||++|... |.|+||||++|+| |+++|+.||++||||+.+..... ++.+.+.... .....++|.+.....
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~-l~~~~h~~~h--~~~~~~~~~~~~~~~ 327 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEP-IVSFEHAFSH--LVWQLTVFPGRLVHG 327 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCC-CCEEEEECSS--EEEEEEEEEEEECCS
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecc-cccEEEEcce--EEEEEEEEEEEEcCC
Confidence 47999998754 7899999999999 99999999999999999888776 7776655442 345567777765532
Q ss_pred cCCCCcCcceeEEEEecCCCcc
Q 031232 139 LAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 139 ~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
..+..+++|++++++..
T Consensus 328 -----~~e~~~~~Wv~~~el~~ 344 (369)
T 3fsp_A 328 -----GPVEEPYRLAPEDELKA 344 (369)
T ss_dssp -----SCCCTTEEEEEGGGGGG
T ss_pred -----CCCccccEEeeHHHhhh
Confidence 22346899999998754
No 72
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.52 E-value=4.1e-14 Score=110.44 Aligned_cols=109 Identities=11% Similarity=0.078 Sum_probs=72.7
Q ss_pred CeEEEEEEEEEeecCcccccccCCceEEEEEEEcCC-----CCEEec-CcccCCC------CC---HHHHHHHHHHHHhC
Q 031232 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-----KGMLFP-KGGWEID------ES---IQEAALRETIEEAG 102 (163)
Q Consensus 38 ~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~-----~~W~lP-GG~ve~g------Es---~~eaA~REl~EEtG 102 (163)
...++++++++. ++++||.+|... |.|.+| ||++++| |+ +.+||+||++||||
T Consensus 58 ~h~av~v~v~~~------------~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElG 125 (235)
T 2dho_A 58 LHRAFSVFLFNT------------ENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELG 125 (235)
T ss_dssp CEEEEEEEEECT------------TCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred eEEEEEEEEEcC------------CCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHC
Confidence 345666666643 237898887542 689999 5999999 88 49999999999999
Q ss_pred Ceeee-----eceeeeEEEEeeCCCCc---eEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 103 VTGIV-----ECELLGEWNFKSRAHNT---DYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 103 l~~~~-----~~~~l~~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
|.+.. ... ++.+.|....... ....++|.+........ ...+..+++|++++++..
T Consensus 126 i~~~~v~~~~l~~-l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~-~~~Ev~~~~wv~~~el~~ 189 (235)
T 2dho_A 126 IPLEEVPPEEINY-LTRIHYKAQSDGIWGEHEIDYILLVRMNVTLNP-DPNEIKSYCYVSKEELKE 189 (235)
T ss_dssp CCGGGSCGGGSEE-EEEEEEEEECSSSBEEEEEEEEEEEECCCCCCC-CTTTEEEEEEECHHHHHH
T ss_pred CCccccChhhcEE-EEEEEEeccCCCccceeEEEEEEEEEECCCCcC-ChHHEEEEEEEcHHHHHH
Confidence 98652 234 6766655433222 23456677665432222 234568999999987653
No 73
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.50 E-value=9e-14 Score=112.06 Aligned_cols=114 Identities=14% Similarity=0.122 Sum_probs=77.7
Q ss_pred CeEEEEEEEEEeecCcccccccCCceEEEEEEEcCC-----CCE-EecCcccCCCCCHHHHHHHHHHHHhCCeeeeec--
Q 031232 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-----KGM-LFPKGGWEIDESIQEAALRETIEEAGVTGIVEC-- 109 (163)
Q Consensus 38 ~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~-----~~W-~lPGG~ve~gEs~~eaA~REl~EEtGl~~~~~~-- 109 (163)
....|-+.+|..+ +++.++||.+|... |.| .+|+|++++|||+.+||+||+.||+||......
T Consensus 117 ~~~~vh~~~~~~~---------~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l 187 (300)
T 3dup_A 117 RAYGVHLNGYVGA---------GADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQA 187 (300)
T ss_dssp CEEEEEEEEEESC---------GGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTC
T ss_pred EEEEEEEEEEEec---------CCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhc
Confidence 3566777777764 23457888888643 789 589999999999999999999999999864322
Q ss_pred eeeeEEEEeeCCCCc--eEEEEEEEEEeccccCCCC-cCcceeEEEEecCCCcc
Q 031232 110 ELLGEWNFKSRAHNT--DYQGYMFPLLVQDQLAEWP-EKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 110 ~~l~~~~~~~~~~~~--~~~~~~f~~~~~~~~~~~~-~~e~~~~~W~~~~e~~~ 160 (163)
.+++.+.|....... ....++|.+.+.......+ +.|..+++|++++++..
T Consensus 188 ~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~ 241 (300)
T 3dup_A 188 IPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVE 241 (300)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHH
T ss_pred cccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHH
Confidence 125555544322222 3355677776664433333 33468999999988754
No 74
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.48 E-value=6.9e-14 Score=109.88 Aligned_cols=109 Identities=10% Similarity=0.056 Sum_probs=72.3
Q ss_pred CeEEEEEEEEEeecCcccccccCCceEEEEEEEcC-----CCCEEecC-cccCCC------CCH---HHHHHHHHHHHhC
Q 031232 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLFPK-GGWEID------ESI---QEAALRETIEEAG 102 (163)
Q Consensus 38 ~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~lPG-G~ve~g------Es~---~eaA~REl~EEtG 102 (163)
...++.+++++. ++++||.+|.. .|.|.+|+ |++++| |++ ++||+||++||||
T Consensus 69 ~h~av~v~v~~~------------~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElG 136 (246)
T 2pny_A 69 LHRAFSVVLFNT------------KNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELG 136 (246)
T ss_dssp CEEEEEEEEECT------------TCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEEEeC------------CCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHC
Confidence 345666666642 23688888754 26899985 999999 887 9999999999999
Q ss_pred Ceeee-----eceeeeEEEEeeCCCCc---eEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 103 VTGIV-----ECELLGEWNFKSRAHNT---DYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 103 l~~~~-----~~~~l~~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
|.+.. ... ++.+.|....... ....++|.+........ ...|..+++|++++++..
T Consensus 137 i~~~~v~~~~l~~-l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~-~~~Ev~~~~wv~~eel~~ 200 (246)
T 2pny_A 137 IPGEQISPEDIVF-MTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNP-DPSETKSILYLSQEELWE 200 (246)
T ss_dssp CCTTTCCGGGSEE-EEEEEEEEESSSSBEEEEEEEEEEEECCCCCCC-CTTTEEEEEEECHHHHHH
T ss_pred CCccccCccccEE-EEEEEEEecCCCceeeeEEEEEEEEEECCCCCC-ChHHeeEEEEEeHHHHHH
Confidence 98642 233 6666655432222 23456676665432222 234568999999987653
No 75
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.34 E-value=3.9e-12 Score=96.77 Aligned_cols=73 Identities=21% Similarity=0.243 Sum_probs=56.9
Q ss_pred ccCC-CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHhCC------ee
Q 031232 33 RYQK-GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGV------TG 105 (163)
Q Consensus 33 ~~~~-~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEtGl------~~ 105 (163)
.|.+ +.|.+|.+|++... .+..+|||+|+ ..+.|.||||++++||++++|+.||+.||+|+ ..
T Consensus 51 ~y~~~g~R~sV~avil~~~---------~~~phVLLlq~-~~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~ 120 (208)
T 3bho_A 51 EFDKIGMRRTVEGVLIVHE---------HRLPHVLLLQL-GTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDW 120 (208)
T ss_dssp HHHHHCSEEEEEEEEEEEE---------TTEEEEEEEEE-ETTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----C
T ss_pred HHHhhCCceEEEEEEEEcC---------CCCcEEEEEEc-CCCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccE
Confidence 4444 77888888887654 34468999998 45689999999999999999999999999994 44
Q ss_pred eeeceeeeEEE
Q 031232 106 IVECELLGEWN 116 (163)
Q Consensus 106 ~~~~~~l~~~~ 116 (163)
.+... +|.|.
T Consensus 121 eIge~-lg~ww 130 (208)
T 3bho_A 121 VIDDC-IGNWW 130 (208)
T ss_dssp EEEEE-EEEEE
T ss_pred EEhhe-EEEEe
Confidence 44555 77653
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.33 E-value=1.6e-12 Score=105.76 Aligned_cols=94 Identities=14% Similarity=0.150 Sum_probs=69.0
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHHh-CCeeeeeceeeeEE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEA-GVTGIVECELLGEW 115 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~REl~EEt-Gl~~~~~~~~l~~~ 115 (163)
.|+..|++|+.+.+ +|||+ .+.| |.||||.++ ++..++|+||++||| |+++....+ ++.|
T Consensus 181 ~p~~~vgaii~~~g-------------~vLL~--~~~G-W~LPG~~~~--~~~~~~a~RE~~EEttGl~v~~~~L-~~v~ 241 (321)
T 3rh7_A 181 EGEIRLGAVLEQQG-------------AVFLA--GNET-LSLPNCTVE--GGDPARTLAAYLEQLTGLNVTIGFL-YSVY 241 (321)
T ss_dssp HSCEEEEEEEESSS-------------CEEEB--CSSE-EBCCEEEES--SSCHHHHHHHHHHHHHSSCEEEEEE-EEEE
T ss_pred CCcceEEEEEEECC-------------EEEEe--eCCC-ccCCcccCC--CChhHHHHHHHHHHhcCCEEeeceE-EEEE
Confidence 47899999999753 69999 5567 999988654 444469999999997 999998887 7776
Q ss_pred EEeeCCCCceEEEEEEEEEeccccCCCCcCcceeEEEEecCCCcc
Q 031232 116 NFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWVCTFMPVT 160 (163)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~ 160 (163)
.... .. .+..+|.+...... ..+++||++++...
T Consensus 242 ~~~~--~~--~~~i~f~~~~~~g~-------~~e~~~f~~~elp~ 275 (321)
T 3rh7_A 242 EDKS--DG--RQNIVYHALASDGA-------PRQGRFLRPAELAA 275 (321)
T ss_dssp ECTT--TC--CEEEEEEEEECSSC-------CSSSEEECHHHHTT
T ss_pred EcCC--Cc--eEEEEEEEEeCCCC-------eeeeEEECHHHCCC
Confidence 5432 22 23468888765322 25799999987653
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.32 E-value=5.6e-13 Score=100.61 Aligned_cols=95 Identities=11% Similarity=-0.060 Sum_probs=61.6
Q ss_pred CCeEEEEEEEEEeecCcccccccCCceEEEEEEEcCCCCEEecCcccCCCC-CHHHHHHHHHHHHhCC-eeeeeceeeeE
Q 031232 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGV-TGIVECELLGE 114 (163)
Q Consensus 37 ~~~~~v~~ii~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPGG~ve~gE-s~~eaA~REl~EEtGl-~~~~~~~~l~~ 114 (163)
+.+.++-+.++..++..=-+.+ +-...+|++.+.+|.|.||||+||+|| |+++|+.||+.||+|+ .+..... +..
T Consensus 19 ~~~hach~mlya~~~~~lfg~~--p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y-~~s 95 (214)
T 3kvh_A 19 GWSHSCHAMLYAANPGQLFGRI--PMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADY-LSS 95 (214)
T ss_dssp TCEEEEEEEEEEEEEEEETTTE--EEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGE-EEE
T ss_pred CccEeeEEEEEcCCcccccccc--chhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeee-EEE
Confidence 4577788888876421100111 112357777777899999999999999 9999999999999997 3554444 444
Q ss_pred EEEeeCCCCceEEEEEEEEEecc
Q 031232 115 WNFKSRAHNTDYQGYMFPLLVQD 137 (163)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~ 137 (163)
..+.+. .....++|.+....
T Consensus 96 ~~~~yp---~~V~LHfY~crl~~ 115 (214)
T 3kvh_A 96 HLTEGP---HRVVAHLYARQLTL 115 (214)
T ss_dssp EEC-------CEEEEEEEEECCH
T ss_pred EeccCC---CEEEEEEEEEEeeC
Confidence 333322 24667888888764
No 78
>4fp5_D LT-IIB, heat-labIle enterotoxin IIB, B chain; B pentamer LT-IIB S74A mutant; 1.40A {Escherichia coli} PDB: 1qb5_D 1qcb_D 1tii_D 4fnf_D 4fo2_D
Probab=26.12 E-value=47 Score=20.95 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=21.6
Q ss_pred ccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHH
Q 031232 58 INEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRE 96 (163)
Q Consensus 58 ~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~RE 96 (163)
+|++..-+.++.. -+|.|.+|+|+--|+ ....+-.|.
T Consensus 30 in~nt~g~yvvs~-tggvw~i~~~~dypd-n~~s~e~rk 66 (98)
T 4fp5_D 30 INNNTDGMYVVSS-TGGVWRISRAKDYPD-NVMTAEMRK 66 (98)
T ss_dssp CSTTTCEEEEEET-TCCEEEECCCSSTTH-HHHHHHHHH
T ss_pred ccCCCccEEEEec-CCcEEEecCCCCCCh-hhhhHHHHH
Confidence 3445445555544 457899999986553 333343343
No 79
>1qb5_D Protein (heat labIle enterotoxin type IIB B- pentamer); 1.90A {Escherichia coli} SCOP: b.40.2.1 PDB: 1qcb_D 1tii_D
Probab=25.47 E-value=48 Score=20.95 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=21.6
Q ss_pred ccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHH
Q 031232 58 INEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRE 96 (163)
Q Consensus 58 ~~~~~~~vLLv~r~~~~~W~lPGG~ve~gEs~~eaA~RE 96 (163)
+|++..-+.++.. -+|.|.+|+|+--|+ ....+-.|.
T Consensus 30 in~nt~g~yvvs~-tggvw~i~~~~dypd-n~~s~e~rk 66 (99)
T 1qb5_D 30 INNNTDGMYVVSS-TGGVWRISRAKDYPD-NVMTAEMRK 66 (99)
T ss_dssp CSTTTCEEEEEET-TSCEEEECCCSSTTH-HHHHHHHHH
T ss_pred ccCCCccEEEEec-CCcEEEecCCCCCCh-hhhhHHHHH
Confidence 3444445555544 457899999986553 333443443
Done!