Query 031235
Match_columns 163
No_of_seqs 138 out of 1569
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 11:12:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031235.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031235hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 1.8E-29 4E-34 161.8 6.8 141 22-162 39-184 (226)
2 KOG4412 26S proteasome regulat 99.9 2.7E-28 5.8E-33 156.4 5.1 116 48-163 33-152 (226)
3 KOG0509 Ankyrin repeat and DHH 99.9 5.4E-27 1.2E-31 174.4 6.1 138 25-162 49-190 (600)
4 PHA02791 ankyrin-like protein; 99.9 1.9E-25 4.2E-30 157.9 8.9 156 5-162 13-172 (284)
5 KOG0509 Ankyrin repeat and DHH 99.9 5.4E-25 1.2E-29 163.8 8.6 144 20-163 77-225 (600)
6 PHA02791 ankyrin-like protein; 99.9 2.4E-23 5.3E-28 147.2 11.2 113 48-162 25-140 (284)
7 KOG0508 Ankyrin repeat protein 99.9 8.5E-25 1.8E-29 158.2 3.0 137 26-162 90-227 (615)
8 PHA02875 ankyrin repeat protei 99.9 2.6E-23 5.7E-28 155.1 8.5 140 23-162 37-180 (413)
9 PHA02859 ankyrin repeat protei 99.9 6.8E-23 1.5E-27 139.8 9.5 130 32-161 65-203 (209)
10 PHA02875 ankyrin repeat protei 99.9 3.1E-23 6.8E-28 154.7 8.2 141 22-162 70-214 (413)
11 PHA02741 hypothetical protein; 99.9 1.7E-22 3.8E-27 133.6 10.6 115 48-162 16-144 (169)
12 PHA02874 ankyrin repeat protei 99.9 1.6E-22 3.5E-27 151.7 11.4 118 44-161 115-234 (434)
13 PHA02884 ankyrin repeat protei 99.9 3.7E-22 8E-27 141.5 11.5 111 51-161 31-148 (300)
14 PHA02874 ankyrin repeat protei 99.9 1.1E-22 2.4E-27 152.7 8.5 141 22-162 37-202 (434)
15 PHA02859 ankyrin repeat protei 99.9 7.8E-23 1.7E-27 139.5 6.6 139 21-162 22-171 (209)
16 PHA03100 ankyrin repeat protei 99.9 1.2E-22 2.6E-27 154.1 8.0 131 32-162 155-295 (480)
17 PHA02878 ankyrin repeat protei 99.9 6.3E-22 1.4E-26 150.1 11.3 118 42-159 156-278 (477)
18 KOG0502 Integral membrane anky 99.9 8.8E-23 1.9E-27 135.0 5.0 120 43-162 150-271 (296)
19 PHA02878 ankyrin repeat protei 99.9 2.1E-22 4.6E-27 152.7 7.8 133 26-160 174-310 (477)
20 PHA03095 ankyrin-like protein; 99.9 5.7E-22 1.2E-26 150.1 9.0 132 30-161 24-163 (471)
21 PHA02743 Viral ankyrin protein 99.9 1.6E-21 3.4E-26 128.6 9.4 125 22-146 22-155 (166)
22 PHA03100 ankyrin repeat protei 99.9 4.4E-22 9.6E-27 151.0 7.7 137 26-162 41-188 (480)
23 PF12796 Ank_2: Ankyrin repeat 99.9 7.8E-21 1.7E-25 112.9 11.3 87 57-147 1-87 (89)
24 PLN03192 Voltage-dependent pot 99.9 5E-22 1.1E-26 158.8 7.6 137 24-162 529-667 (823)
25 KOG0514 Ankyrin repeat protein 99.9 3.6E-22 7.7E-27 140.6 5.3 119 44-162 259-419 (452)
26 PHA02946 ankyin-like protein; 99.9 1.8E-21 3.8E-26 146.1 9.0 129 33-161 52-219 (446)
27 PHA02743 Viral ankyrin protein 99.9 2.2E-21 4.8E-26 127.9 8.2 112 51-162 18-140 (166)
28 KOG0510 Ankyrin repeat protein 99.9 1.9E-21 4.1E-26 148.5 8.5 117 46-162 266-389 (929)
29 KOG4177 Ankyrin [Cell wall/mem 99.9 1.8E-21 3.9E-26 155.2 8.7 142 22-163 475-619 (1143)
30 KOG0512 Fetal globin-inducing 99.9 3.5E-21 7.6E-26 123.2 8.3 109 53-161 63-174 (228)
31 PHA03095 ankyrin-like protein; 99.9 3.2E-21 7E-26 146.0 9.0 128 35-162 169-302 (471)
32 KOG0508 Ankyrin repeat protein 99.8 1.6E-21 3.5E-26 141.4 6.4 149 15-163 37-196 (615)
33 PHA02716 CPXV016; CPX019; EVM0 99.8 4.1E-21 8.9E-26 149.8 8.0 128 32-159 191-361 (764)
34 PHA02798 ankyrin-like protein; 99.8 1.5E-20 3.2E-25 143.1 10.4 47 116-162 255-303 (489)
35 PHA02716 CPXV016; CPX019; EVM0 99.8 6.4E-21 1.4E-25 148.7 8.3 130 30-159 152-326 (764)
36 PHA02989 ankyrin repeat protei 99.8 9.4E-21 2E-25 144.3 8.7 132 31-162 122-301 (494)
37 PHA02946 ankyin-like protein; 99.8 7.3E-21 1.6E-25 142.8 7.3 111 50-162 138-254 (446)
38 PHA02795 ankyrin-like protein; 99.8 1.7E-20 3.7E-25 138.2 8.1 130 31-162 129-266 (437)
39 PHA02736 Viral ankyrin protein 99.8 8.9E-21 1.9E-25 123.7 5.7 112 49-162 13-138 (154)
40 KOG0195 Integrin-linked kinase 99.8 1.5E-20 3.2E-25 129.4 6.8 133 26-158 6-141 (448)
41 PHA02798 ankyrin-like protein; 99.8 2.3E-20 5E-25 142.0 7.9 130 31-160 49-192 (489)
42 PHA02876 ankyrin repeat protei 99.8 7.4E-20 1.6E-24 144.2 10.8 119 42-160 364-486 (682)
43 PHA02917 ankyrin-like protein; 99.8 5.1E-20 1.1E-24 143.5 8.6 107 56-162 106-241 (661)
44 KOG0502 Integral membrane anky 99.8 1.9E-19 4.1E-24 119.3 9.0 138 24-163 100-239 (296)
45 PHA02989 ankyrin repeat protei 99.8 8.9E-20 1.9E-24 139.0 7.6 105 41-145 96-211 (494)
46 PLN03192 Voltage-dependent pot 99.8 3.1E-19 6.6E-24 142.9 10.9 114 50-163 522-635 (823)
47 PHA02876 ankyrin repeat protei 99.8 4.3E-19 9.3E-24 139.9 11.2 110 52-161 340-453 (682)
48 PHA02736 Viral ankyrin protein 99.8 3.9E-19 8.5E-24 115.9 8.3 98 49-146 51-153 (154)
49 PHA02741 hypothetical protein; 99.8 1.4E-18 3.1E-23 114.9 9.0 126 21-146 22-159 (169)
50 KOG0512 Fetal globin-inducing 99.8 6.5E-19 1.4E-23 112.8 6.8 133 29-161 72-209 (228)
51 PHA02917 ankyrin-like protein; 99.8 6.9E-19 1.5E-23 137.2 8.0 127 31-159 46-194 (661)
52 KOG0505 Myosin phosphatase, re 99.8 2.9E-19 6.4E-24 131.1 5.5 139 23-161 43-242 (527)
53 KOG0510 Ankyrin repeat protein 99.8 3.4E-19 7.3E-24 136.4 5.7 136 27-162 194-353 (929)
54 cd00204 ANK ankyrin repeats; 99.8 1.6E-17 3.4E-22 103.9 11.4 113 50-162 4-118 (126)
55 KOG4214 Myotrophin and similar 99.8 3.3E-18 7.2E-23 98.6 7.4 99 55-154 4-104 (117)
56 KOG4177 Ankyrin [Cell wall/mem 99.8 1.5E-18 3.3E-23 138.7 6.9 128 31-158 518-652 (1143)
57 PHA02795 ankyrin-like protein; 99.8 1.3E-17 2.8E-22 123.1 10.8 95 52-146 187-289 (437)
58 PHA02884 ankyrin repeat protei 99.7 5E-18 1.1E-22 120.5 7.9 116 25-140 38-158 (300)
59 PHA02730 ankyrin-like protein; 99.7 8.3E-18 1.8E-22 129.5 9.0 110 50-159 375-505 (672)
60 PHA02730 ankyrin-like protein; 99.7 6.2E-17 1.3E-21 124.8 11.1 116 47-162 35-167 (672)
61 TIGR00870 trp transient-recept 99.7 2.7E-17 5.9E-22 130.8 9.1 114 50-163 125-270 (743)
62 TIGR00870 trp transient-recept 99.7 1.8E-17 3.8E-22 131.9 6.5 78 84-161 126-219 (743)
63 KOG0195 Integrin-linked kinase 99.7 2.2E-17 4.8E-22 113.9 5.9 102 61-162 8-112 (448)
64 COG0666 Arp FOG: Ankyrin repea 99.7 4.4E-16 9.5E-21 106.7 11.8 114 49-162 69-192 (235)
65 KOG0507 CASK-interacting adapt 99.7 1.4E-17 3.1E-22 126.7 4.6 119 44-162 40-160 (854)
66 PTZ00322 6-phosphofructo-2-kin 99.7 3.9E-16 8.5E-21 122.4 12.5 102 55-156 84-194 (664)
67 KOG0515 p53-interacting protei 99.7 1.3E-16 2.8E-21 117.6 8.9 105 51-155 548-655 (752)
68 PHA02792 ankyrin-like protein; 99.7 2E-16 4.3E-21 121.0 10.2 107 53-159 339-452 (631)
69 KOG4214 Myotrophin and similar 99.7 1.8E-17 3.9E-22 95.6 3.4 95 31-126 13-107 (117)
70 KOG3676 Ca2+-permeable cation 99.7 9.7E-17 2.1E-21 123.1 6.8 117 46-162 177-320 (782)
71 PHA02792 ankyrin-like protein; 99.7 3.4E-16 7.3E-21 119.7 8.0 116 46-161 64-226 (631)
72 KOG0514 Ankyrin repeat protein 99.7 1.9E-16 4.2E-21 112.0 5.9 111 31-141 318-429 (452)
73 PF13857 Ank_5: Ankyrin repeat 99.6 4.6E-16 9.9E-21 84.1 4.7 55 72-126 1-56 (56)
74 PF12796 Ank_2: Ankyrin repeat 99.6 4.7E-16 1E-20 92.2 4.2 64 53-116 26-89 (89)
75 PF13637 Ank_4: Ankyrin repeat 99.6 2.8E-15 6E-20 80.5 6.5 54 86-139 1-54 (54)
76 PF13637 Ank_4: Ankyrin repeat 99.6 2.5E-15 5.4E-20 80.7 6.0 54 53-106 1-54 (54)
77 KOG0507 CASK-interacting adapt 99.6 6.3E-16 1.4E-20 117.9 4.7 120 44-163 73-202 (854)
78 KOG0505 Myosin phosphatase, re 99.6 1.1E-14 2.3E-19 107.5 7.8 107 52-158 39-147 (527)
79 KOG0515 p53-interacting protei 99.6 1.9E-15 4.1E-20 111.5 3.8 117 25-141 555-674 (752)
80 PF13857 Ank_5: Ankyrin repeat 99.5 2.8E-15 6E-20 81.0 2.7 53 105-157 1-56 (56)
81 cd00204 ANK ankyrin repeats; 99.5 5.1E-14 1.1E-18 87.8 7.6 114 26-139 13-126 (126)
82 KOG1710 MYND Zn-finger and ank 99.5 4.2E-14 9.2E-19 97.6 7.6 91 48-138 40-131 (396)
83 COG0666 Arp FOG: Ankyrin repea 99.5 2.6E-13 5.6E-18 92.9 9.2 112 31-142 84-203 (235)
84 KOG1710 MYND Zn-finger and ank 99.5 5.2E-14 1.1E-18 97.2 4.8 111 52-162 11-124 (396)
85 KOG4369 RTK signaling protein 99.3 4.7E-13 1E-17 106.5 2.0 136 27-162 764-904 (2131)
86 PTZ00322 6-phosphofructo-2-kin 99.3 2.5E-12 5.4E-17 101.2 5.8 101 27-127 89-196 (664)
87 KOG0506 Glutaminase (contains 99.3 4.6E-12 1E-16 92.8 5.6 94 50-143 503-597 (622)
88 KOG3676 Ca2+-permeable cation 99.3 1.8E-11 3.8E-16 94.7 8.7 93 50-142 237-331 (782)
89 KOG4369 RTK signaling protein 99.2 2.7E-12 5.8E-17 102.3 1.9 112 51-162 755-869 (2131)
90 KOG0818 GTPase-activating prot 99.2 2.8E-10 6.1E-15 84.0 9.6 86 55-140 135-221 (669)
91 KOG0782 Predicted diacylglycer 99.1 6.7E-11 1.4E-15 88.8 4.0 101 42-142 888-990 (1004)
92 KOG0783 Uncharacterized conser 99.1 8.7E-11 1.9E-15 91.5 3.3 85 44-128 43-128 (1267)
93 KOG0522 Ankyrin repeat protein 99.0 1.3E-09 2.9E-14 81.0 7.6 87 55-141 22-110 (560)
94 PF13606 Ank_3: Ankyrin repeat 99.0 7.4E-10 1.6E-14 51.6 4.0 28 119-146 2-29 (30)
95 PF00023 Ank: Ankyrin repeat H 98.9 2.4E-09 5.1E-14 51.2 4.2 27 87-113 3-29 (33)
96 PF13606 Ank_3: Ankyrin repeat 98.9 2E-09 4.4E-14 50.1 3.9 28 86-113 2-29 (30)
97 KOG0705 GTPase-activating prot 98.9 7.7E-09 1.7E-13 77.9 8.3 91 56-146 627-721 (749)
98 KOG0783 Uncharacterized conser 98.9 4.7E-10 1E-14 87.5 1.1 81 79-159 45-128 (1267)
99 PF00023 Ank: Ankyrin repeat H 98.9 5.2E-09 1.1E-13 50.0 3.9 32 52-83 1-32 (33)
100 KOG0506 Glutaminase (contains 98.8 1.1E-09 2.4E-14 80.6 0.4 87 24-110 510-597 (622)
101 KOG0782 Predicted diacylglycer 98.8 1.9E-08 4.1E-13 76.0 5.8 106 57-162 870-979 (1004)
102 KOG0511 Ankyrin repeat protein 98.7 6.4E-08 1.4E-12 69.8 7.3 70 54-123 37-106 (516)
103 KOG0818 GTPase-activating prot 98.6 1.4E-07 2.9E-12 70.2 5.5 74 89-162 136-212 (669)
104 KOG0521 Putative GTPase activa 98.5 1E-07 2.2E-12 76.0 4.6 96 63-158 631-730 (785)
105 KOG0522 Ankyrin repeat protein 98.5 7.8E-08 1.7E-12 71.9 3.7 75 88-162 22-100 (560)
106 KOG0521 Putative GTPase activa 98.5 9.2E-08 2E-12 76.2 3.7 88 52-139 655-742 (785)
107 KOG0520 Uncharacterized conser 98.5 1.2E-07 2.6E-12 75.8 4.1 116 47-162 568-692 (975)
108 KOG0511 Ankyrin repeat protein 98.5 4.1E-07 9E-12 65.7 6.3 60 87-146 37-96 (516)
109 KOG0705 GTPase-activating prot 98.5 4.1E-07 8.9E-12 68.9 6.4 67 47-113 655-721 (749)
110 KOG2384 Major histocompatibili 98.4 1.9E-06 4E-11 56.8 6.7 61 48-108 7-68 (223)
111 KOG0520 Uncharacterized conser 98.1 4.6E-07 1E-11 72.6 -0.7 128 13-141 566-702 (975)
112 KOG3609 Receptor-activated Ca2 98.1 2.2E-05 4.9E-10 62.1 7.7 93 47-146 56-158 (822)
113 KOG2384 Major histocompatibili 98.0 3.2E-05 7E-10 51.1 6.4 69 76-144 2-71 (223)
114 KOG2505 Ankyrin repeat protein 97.7 0.00013 2.8E-09 54.9 5.8 62 66-127 404-471 (591)
115 smart00248 ANK ankyrin repeats 97.5 0.00035 7.5E-09 30.9 4.0 27 119-145 2-28 (30)
116 KOG3609 Receptor-activated Ca2 97.5 0.00016 3.5E-09 57.5 4.4 104 53-163 25-144 (822)
117 smart00248 ANK ankyrin repeats 97.3 0.00067 1.5E-08 29.9 3.9 25 86-110 2-26 (30)
118 KOG2505 Ankyrin repeat protein 97.2 0.00091 2E-08 50.5 5.4 60 99-158 404-471 (591)
119 PF06128 Shigella_OspC: Shigel 96.6 0.019 4.1E-07 39.5 7.6 93 53-146 179-281 (284)
120 PF03158 DUF249: Multigene fam 93.6 0.25 5.4E-06 33.0 5.1 82 53-140 104-191 (192)
121 PF11929 DUF3447: Domain of un 93.5 0.28 6.1E-06 27.8 4.7 47 55-108 8-54 (76)
122 PF11929 DUF3447: Domain of un 92.9 0.31 6.7E-06 27.6 4.2 47 88-141 8-54 (76)
123 PF06128 Shigella_OspC: Shigel 92.2 0.53 1.1E-05 32.7 5.2 49 63-111 227-279 (284)
124 PF03158 DUF249: Multigene fam 77.0 7.9 0.00017 26.1 4.6 103 51-162 74-182 (192)
125 KOG1709 Guanidinoacetate methy 65.5 7.5 0.00016 27.1 2.7 37 74-110 3-39 (271)
126 KOG3836 HLH transcription fact 38.7 7.1 0.00015 31.2 -0.8 52 60-111 403-454 (605)
127 KOG1709 Guanidinoacetate methy 32.3 50 0.0011 23.3 2.4 30 49-78 11-40 (271)
128 KOG1595 CCCH-type Zn-finger pr 28.6 7.2 0.00016 30.6 -2.2 89 52-142 57-155 (528)
129 KOG1595 CCCH-type Zn-finger pr 25.1 15 0.00032 29.0 -1.1 65 85-151 57-127 (528)
130 PF08898 DUF1843: Domain of un 22.9 1.3E+02 0.0029 15.8 2.7 20 56-75 6-25 (53)
131 PF12645 HTH_16: Helix-turn-he 22.1 1.4E+02 0.0029 16.3 2.6 20 56-75 2-21 (65)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.8e-29 Score=161.78 Aligned_cols=141 Identities=26% Similarity=0.332 Sum_probs=120.5
Q ss_pred ceeeeeecc-CCCCcCCCCC-CCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHhcCc
Q 031235 22 NMRFSFGRQ-SSLDPIRRSP-VQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGH 98 (163)
Q Consensus 22 ~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~ 98 (163)
..++.++.+ +..+.+.-++ ..+-....++..||||||.|+..|+.++|+.|+.. |++++..+..|.|+||||+..|+
T Consensus 39 Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r 118 (226)
T KOG4412|consen 39 RTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGR 118 (226)
T ss_pred CceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCCh
Confidence 345666665 3333333333 23344555678899999999999999999999987 89999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 99 VEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 99 ~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.++..+|++.|+.++++|..|.||||.|+..|..+++++|++.|+.++ +..|+||||.|..-||
T Consensus 119 ~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~ 184 (226)
T KOG4412|consen 119 LEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGH 184 (226)
T ss_pred hhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999988 8899999999965554
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=2.7e-28 Score=156.44 Aligned_cols=116 Identities=30% Similarity=0.354 Sum_probs=107.1
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHH
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLN-EGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAAD 125 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~ 125 (163)
..+-+|+|||||||..|+.+++.+|+. .+..++.+|..||||||+|+..|+-++++-|+.. |+++++.++.|.|+||+
T Consensus 33 r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHy 112 (226)
T KOG4412|consen 33 RDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHY 112 (226)
T ss_pred cccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehh
Confidence 344479999999999999999999994 5778899999999999999999999999999988 99999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCCC
Q 031235 126 AKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGHL 163 (163)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~~ 163 (163)
|+..|..+++++|++.|+.++ +..++||||.|+.-|.+
T Consensus 113 AagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGkl 152 (226)
T KOG4412|consen 113 AAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKL 152 (226)
T ss_pred hhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccch
Confidence 999999999999999999977 77788999999988764
No 3
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.94 E-value=5.4e-27 Score=174.40 Aligned_cols=138 Identities=24% Similarity=0.323 Sum_probs=118.9
Q ss_pred eeeeccCCCCcCCCCCCC-cCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVEVV 102 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~ 102 (163)
+.+...++.+.++.+... +......+.+|.++|||||.++..+++++|+++|+++|..+ .-+.||||||+.+|+..++
T Consensus 49 v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv 128 (600)
T KOG0509|consen 49 VKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVV 128 (600)
T ss_pred hhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHH
Confidence 444555777777776666 67777778889999999999999999999999999998877 6688999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 103 ~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+|++.|++++.+|.+|.+|+|.|++.|++-++-+|+..|++++ +.+|+|||+||+.+|+
T Consensus 129 ~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~ 190 (600)
T KOG0509|consen 129 DLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGF 190 (600)
T ss_pred HHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcc
Confidence 99999999999999999999999999999999999999998877 7788899999988775
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.92 E-value=1.9e-25 Score=157.87 Aligned_cols=156 Identities=22% Similarity=0.230 Sum_probs=104.6
Q ss_pred HHHHHHhhhccC-CCCCCceeeeeec-cCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 031235 5 RLTRQMSRQSSF-DPRRNNMRFSFGR-QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSI 82 (163)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~ 82 (163)
++..++...... .......++.++. .+..+.++.++..+..... ..+.||||+|+..|+.++++.|+..|++++.+
T Consensus 13 ~~~~~Lis~~a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~--~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~ 90 (284)
T PHA02791 13 QLKSFLSSKDAFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNL--LENEFPLHQAATLEDTKIVKILLFSGMDDSQF 90 (284)
T ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcC--CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Confidence 444555542222 2222333444433 4555544444443332222 23678888888888888888888888888888
Q ss_pred CCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCC-cHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCceeeeeccC
Q 031235 83 DLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGS-TAAADAKYYGNVEVYNILKARGAKVPN-GILHIFFHFRKPR 160 (163)
Q Consensus 83 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-t~l~~a~~~g~~~~~~~Ll~~g~~~~~-~~~~t~l~~A~~~ 160 (163)
+..|.||||+|+..++.+++++|+..|++++.++..|+ ||||+|+..|+.+++++|++++++..+ ..|.||||+|+..
T Consensus 91 d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~ 170 (284)
T PHA02791 91 DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKN 170 (284)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHc
Confidence 88888888888888888888888888888877777664 788888888888888888877665433 3467888888877
Q ss_pred CC
Q 031235 161 GH 162 (163)
Q Consensus 161 g~ 162 (163)
|+
T Consensus 171 g~ 172 (284)
T PHA02791 171 GH 172 (284)
T ss_pred CC
Confidence 76
No 5
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.92 E-value=5.4e-25 Score=163.81 Aligned_cols=144 Identities=28% Similarity=0.279 Sum_probs=126.1
Q ss_pred CCceeeeeecc-CCCCcCCCCCCCcCCCCCCC-CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcC
Q 031235 20 RNNMRFSFGRQ-SSLDPIRRSPVQDELTVPEN-LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEG 97 (163)
Q Consensus 20 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~ 97 (163)
.+-..++++.- +..+..+.++..+...+... ..+.||||||+++|+..++..|+++|++++.+|.+|.+++|.|+.++
T Consensus 77 ~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~ 156 (600)
T KOG0509|consen 77 EGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFG 156 (600)
T ss_pred CCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhC
Confidence 34556677665 56666666666665444443 77999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCceeeeeccCCCC
Q 031235 98 HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP---NGILHIFFHFRKPRGHL 163 (163)
Q Consensus 98 ~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~---~~~~~t~l~~A~~~g~~ 163 (163)
+...+.+|+..+++++.+|.+|+|||++|+.+|+...++.|+..|+.+. +.+|.||||||+..|++
T Consensus 157 ~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~ 225 (600)
T KOG0509|consen 157 HTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNL 225 (600)
T ss_pred chHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCc
Confidence 9999999999999999999999999999999999888999999999976 47899999999998874
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.90 E-value=2.4e-23 Score=147.24 Aligned_cols=113 Identities=21% Similarity=0.194 Sum_probs=104.0
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
..+..|.||||+|+..|+.++++.|++.|++++..+ +.||||+|+..|+.+++++|+..|++++.++..|+||||+|+
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa 102 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAV 102 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 467789999999999999999999999999887654 689999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC--CCCCC-ceeeeeccCCC
Q 031235 128 YYGNVEVYNILKARGAKVP--NGILH-IFFHFRKPRGH 162 (163)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~--~~~~~-t~l~~A~~~g~ 162 (163)
..|+.+++++|+++|++++ +..|+ ||||+|+..|+
T Consensus 103 ~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~ 140 (284)
T PHA02791 103 DSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 140 (284)
T ss_pred HcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCC
Confidence 9999999999999999986 45564 89999999876
No 7
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.90 E-value=8.5e-25 Score=158.19 Aligned_cols=137 Identities=23% Similarity=0.330 Sum_probs=125.1
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
.++..++.+.++-++..+...+.......|||..||.-|+++++++|+++|+|+...++.|.|+||+||..|+.+++++|
T Consensus 90 aAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyL 169 (615)
T KOG0508|consen 90 AASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYL 169 (615)
T ss_pred HHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHH
Confidence 33445778888777777766666666677999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCceeeeeccCCC
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP-NGILHIFFHFRKPRGH 162 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~-~~~~~t~l~~A~~~g~ 162 (163)
++.|++++.++..|.|+||.++..|+.+++++|+.+|+.++ +..|.|||-.|+..|+
T Consensus 170 le~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 170 LEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGH 227 (615)
T ss_pred HHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcc
Confidence 99999999999999999999999999999999999999988 7789999999999887
No 8
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.89 E-value=2.6e-23 Score=155.08 Aligned_cols=140 Identities=20% Similarity=0.202 Sum_probs=80.6
Q ss_pred eeeeee-ccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCChHHHHHHhcCcHH
Q 031235 23 MRFSFG-RQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVN-SIDLDGRTALHIAACEGHVE 100 (163)
Q Consensus 23 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~-~~~~~g~t~l~~a~~~~~~~ 100 (163)
.++.++ ..++.+.++.++..+.........+.+|||.|+..|+.+.++.|++.|.... ..+..|.||||+|+..++.+
T Consensus 37 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~ 116 (413)
T PHA02875 37 SPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLD 116 (413)
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHH
Confidence 344333 3466666666655554444444455566666666666666666666554432 22345566666666666666
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 101 ~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 117 iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~ 180 (413)
T PHA02875 117 IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGD 180 (413)
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 6666666666666666666666666666666666666666666544 4455566666665554
No 9
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.89 E-value=6.8e-23 Score=139.77 Aligned_cols=130 Identities=15% Similarity=0.189 Sum_probs=101.8
Q ss_pred CCCcCCCCCCCcCCCCCCC-CCchHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCChHHHHHHh--cCcHHHHHHH
Q 031235 32 SLDPIRRSPVQDELTVPEN-LDSTMQLLFMACS---GDVKGVEDLLNEGIDVNSIDLDGRTALHIAAC--EGHVEVVKLL 105 (163)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~--~~~~~~~~~l 105 (163)
+.+.++.++..+......+ ..|.||||+|+.. ++.++++.|+++|++++.++..|.||||+|+. .++.+++++|
T Consensus 65 ~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~L 144 (209)
T PHA02859 65 NVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLL 144 (209)
T ss_pred CHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHH
Confidence 4555555565555555444 4688899987753 47888888888898888888888999988765 3578889999
Q ss_pred HhcCCCCCCCCCCCCcHHHH-HHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 106 LSKKANIDARDRWGSTAAAD-AKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~-a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
++.|++++.++..|.||||. ++..++.+++++|++.|++++ +..|+|||++|+..+
T Consensus 145 i~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 145 IDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 98899888888888999985 556788889999999988877 667889998887653
No 10
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.89 E-value=3.1e-23 Score=154.68 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=119.9
Q ss_pred ceeeeeeccCCCCcCCCCCCCcCCC-CCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHH
Q 031235 22 NMRFSFGRQSSLDPIRRSPVQDELT-VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (163)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 100 (163)
.+...+...++.+.++.++..+... ...+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+
T Consensus 70 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~ 149 (413)
T PHA02875 70 SELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIK 149 (413)
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 3444555567777766666554332 334556999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCC-CceeeeeccCCC
Q 031235 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGIL-HIFFHFRKPRGH 162 (163)
Q Consensus 101 ~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~-~t~l~~A~~~g~ 162 (163)
++++|++.|++++.++..|.||||+|+..|+.+++++|++.|++++ +..| .||+|+|+..|+
T Consensus 150 ~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~ 214 (413)
T PHA02875 150 GIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNK 214 (413)
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999987 4444 489999998876
No 11
>PHA02741 hypothetical protein; Provisional
Probab=99.89 E-value=1.7e-22 Score=133.60 Aligned_cols=115 Identities=20% Similarity=0.182 Sum_probs=100.4
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCChHHHHHHhcCc----HHHHHHHHhcCCCCCCCCC
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLN------EGIDVNSIDLDGRTALHIAACEGH----VEVVKLLLSKKANIDARDR 117 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~------~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~ 117 (163)
..+..|.|+||+|+..|+.++++.|+. .|++++.+|..|.||||+|+..++ .+++++|+..|++++.++.
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~ 95 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM 95 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence 345679999999999999999998854 257788889999999999999998 4788999999999999885
Q ss_pred -CCCcHHHHHHHcCCHHHHHHHHH-cCCCCC--CCCCCceeeeeccCCC
Q 031235 118 -WGSTAAADAKYYGNVEVYNILKA-RGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 118 -~~~t~l~~a~~~g~~~~~~~Ll~-~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|.||||+|+..++.+++++|+. .|++++ +..|+||||+|+..|+
T Consensus 96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~ 144 (169)
T PHA02741 96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNED 144 (169)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCC
Confidence 89999999999999999999997 588866 7788999999998775
No 12
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.89 E-value=1.6e-22 Score=151.72 Aligned_cols=118 Identities=23% Similarity=0.278 Sum_probs=106.2
Q ss_pred CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q 031235 44 ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 123 (163)
Q Consensus 44 ~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 123 (163)
......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++++..+..|.|||
T Consensus 115 ~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL 194 (434)
T PHA02874 115 IDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPL 194 (434)
T ss_pred CCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 33445667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
|+|+..|+.+++++|++.|+++. +..|.||||+|+..+
T Consensus 195 ~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~ 234 (434)
T PHA02874 195 HNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN 234 (434)
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCC
Confidence 99999999999999999999866 556778888877654
No 13
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.88 E-value=3.7e-22 Score=141.51 Aligned_cols=111 Identities=14% Similarity=0.029 Sum_probs=99.4
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC----CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCC-CCCCCcHHHH
Q 031235 51 LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID----LDGRTALHIAACEGHVEVVKLLLSKKANIDAR-DRWGSTAAAD 125 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~----~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~t~l~~ 125 (163)
.+-.++||.|+..|+.++++.|+++|++++.++ ..|.||||+|+..++.+++++|++.|++++.. +..|.||||.
T Consensus 31 ~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~ 110 (300)
T PHA02884 31 ICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYI 110 (300)
T ss_pred CCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHH
Confidence 334556777788899999999999999998863 58999999999999999999999999999986 4679999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 126 AKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
|+..++.+++++|++.|++++ +..|.||||+|+..+
T Consensus 111 Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~ 148 (300)
T PHA02884 111 SVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMIC 148 (300)
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC
Confidence 999999999999999999987 678899999998754
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.88 E-value=1.1e-22 Score=152.66 Aligned_cols=141 Identities=20% Similarity=0.155 Sum_probs=118.5
Q ss_pred ceeeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCC-----------------------C
Q 031235 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGI-----------------------D 78 (163)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~-----------------------~ 78 (163)
.+...+...++.+.++.++..+......+..|.+|||.|+..|+.+++++|+++|+ +
T Consensus 37 tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d 116 (434)
T PHA02874 37 TPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGID 116 (434)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCC
Confidence 33444555577777777776666666667778999999999999999988887664 3
Q ss_pred CcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeee
Q 031235 79 VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHF 156 (163)
Q Consensus 79 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~ 156 (163)
++.++..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++ +..|.||||+
T Consensus 117 ~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~ 196 (434)
T PHA02874 117 VNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHN 196 (434)
T ss_pred CCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 55667789999999999999999999999999999999999999999999999999999999999866 6778899999
Q ss_pred eccCCC
Q 031235 157 RKPRGH 162 (163)
Q Consensus 157 A~~~g~ 162 (163)
|+..|+
T Consensus 197 A~~~g~ 202 (434)
T PHA02874 197 AAEYGD 202 (434)
T ss_pred HHHcCC
Confidence 998876
No 15
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.88 E-value=7.8e-23 Score=139.47 Aligned_cols=139 Identities=15% Similarity=0.062 Sum_probs=113.8
Q ss_pred CceeeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHc--CCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhc-
Q 031235 21 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACS--GDVKGVEDLLNEGIDVNSID-LDGRTALHIAACE- 96 (163)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~--g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~- 96 (163)
.++.+.+...++.+.++.++.. ....+..|.||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+..
T Consensus 22 ~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~ 98 (209)
T PHA02859 22 CNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFN 98 (209)
T ss_pred CcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhC
Confidence 4445555566777777665543 334567799999999975 48999999999999999987 5899999998764
Q ss_pred --CcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCC--CCCCCceeeee-ccCCC
Q 031235 97 --GHVEVVKLLLSKKANIDARDRWGSTAAADAKY--YGNVEVYNILKARGAKVP--NGILHIFFHFR-KPRGH 162 (163)
Q Consensus 97 --~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~--~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A-~~~g~ 162 (163)
++.+++++|++.|++++.++..|.||||+|+. .++.+++++|++.|++++ +.+|.||||.+ +..|+
T Consensus 99 ~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~ 171 (209)
T PHA02859 99 KNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSD 171 (209)
T ss_pred ccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCC
Confidence 47899999999999999999999999999876 468999999999999987 67888999964 44443
No 16
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.88 E-value=1.2e-22 Score=154.08 Aligned_cols=131 Identities=27% Similarity=0.300 Sum_probs=87.5
Q ss_pred CCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC------ChHHHHHHhcCc--HHHHH
Q 031235 32 SLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDG------RTALHIAACEGH--VEVVK 103 (163)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g------~t~l~~a~~~~~--~~~~~ 103 (163)
+.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..++ .++++
T Consensus 155 ~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~ 234 (480)
T PHA03100 155 DLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVN 234 (480)
T ss_pred hHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHH
Confidence 3333444444444444444566666666666666666666666666666665555 666666666666 77777
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+|++.|++++.++..|.||||+|+..|+.+++++|++.|++++ +..|+||+++|+..|+
T Consensus 235 ~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~ 295 (480)
T PHA03100 235 YLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNN 295 (480)
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCC
Confidence 7777777777777777777777777777777777777777765 5667777777776654
No 17
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.87 E-value=6.3e-22 Score=150.12 Aligned_cols=118 Identities=23% Similarity=0.228 Sum_probs=95.9
Q ss_pred CcCCCCCCCCC-chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCC
Q 031235 42 QDELTVPENLD-STMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGS 120 (163)
Q Consensus 42 ~~~~~~~~~~~-~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 120 (163)
.+......+.. |.||||+|+..|+.++++.|++.|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.
T Consensus 156 ~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~ 235 (477)
T PHA02878 156 YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGN 235 (477)
T ss_pred cCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 33334444555 88899999888889999988888888888888888999998888888888888888888888888888
Q ss_pred cHHHHHHHc-CCHHHHHHHHHcCCCCCC---CCCCceeeeecc
Q 031235 121 TAAADAKYY-GNVEVYNILKARGAKVPN---GILHIFFHFRKP 159 (163)
Q Consensus 121 t~l~~a~~~-g~~~~~~~Ll~~g~~~~~---~~~~t~l~~A~~ 159 (163)
||||+|+.. ++.+++++|+++|++++. ..|.||||+|+.
T Consensus 236 TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~~ 278 (477)
T PHA02878 236 TPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIK 278 (477)
T ss_pred CHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHHcc
Confidence 999988865 688888888888888762 257788888854
No 18
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.87 E-value=8.8e-23 Score=135.04 Aligned_cols=120 Identities=23% Similarity=0.259 Sum_probs=110.0
Q ss_pred cCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcH
Q 031235 43 DELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTA 122 (163)
Q Consensus 43 ~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~ 122 (163)
....+..+..|.|||.||+.+|+++.+++||+.|++++.......++|..|+..|..+++++|+.++.++|..|.+|-||
T Consensus 150 ~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTp 229 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTP 229 (296)
T ss_pred hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCce
Confidence 34456677889999999999999999999999999999888888999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 123 AADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 123 l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|-+|++.++.+|++.|+..|+++. ...|+++++.|+..|+
T Consensus 230 LlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGy 271 (296)
T KOG0502|consen 230 LLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGY 271 (296)
T ss_pred eeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhh
Confidence 999999999999999999999977 6678899999988775
No 19
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.87 E-value=2.1e-22 Score=152.72 Aligned_cols=133 Identities=17% Similarity=0.115 Sum_probs=117.5
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhc-CcHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACE-GHVEVVKL 104 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~-~~~~~~~~ 104 (163)
.++..++.+.++.++..+......+..|.||||.|+..++.++++.|++.|++++.++..|.||||+|+.. ++.+++++
T Consensus 174 ~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~ 253 (477)
T PHA02878 174 YATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKL 253 (477)
T ss_pred HHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHH
Confidence 33444666667767777766777888899999999999999999999999999999999999999999976 78999999
Q ss_pred HHhcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccC
Q 031235 105 LLSKKANIDARDR-WGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPR 160 (163)
Q Consensus 105 ll~~~~~~~~~~~-~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~ 160 (163)
|++.|++++.++. .|.||||+| .++.+++++|+++|++++ +..|+||||+|+..
T Consensus 254 Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 254 LLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQ 310 (477)
T ss_pred HHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHH
Confidence 9999999999875 799999999 567899999999999987 78899999999864
No 20
>PHA03095 ankyrin-like protein; Provisional
Probab=99.87 E-value=5.7e-22 Score=150.10 Aligned_cols=132 Identities=22% Similarity=0.198 Sum_probs=92.8
Q ss_pred cCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCChHHHHHHhcC-cHHHHHHH
Q 031235 30 QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSG---DVKGVEDLLNEGIDVNSIDLDGRTALHIAACEG-HVEVVKLL 105 (163)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~-~~~~~~~l 105 (163)
..+.+.++.++..+......+..|.||||+|+..+ +.++++.|++.|++++.++..|.||||+|+..+ ..+++++|
T Consensus 24 ~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lL 103 (471)
T PHA03095 24 NVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLL 103 (471)
T ss_pred CCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHH
Confidence 34445555555555555555666777777777766 777777777777777777777777777777777 47777777
Q ss_pred HhcCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 106 LSKKANIDARDRWGSTAAADAK--YYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~--~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
++.|++++..+..|.||||+|+ ..++.+++++|+++|++++ +..|.||||+|+..+
T Consensus 104 l~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~ 163 (471)
T PHA03095 104 IKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSR 163 (471)
T ss_pred HHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 7777777777777777777777 4456777777777777765 556677777766543
No 21
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.86 E-value=1.6e-21 Score=128.63 Aligned_cols=125 Identities=23% Similarity=0.207 Sum_probs=98.4
Q ss_pred ceeeeeeccCCCCcCCC----CCCCcCCCCCCCCCchHHHHHHHHcCCHHH---HHHHHHcCCCCcccC-CCCChHHHHH
Q 031235 22 NMRFSFGRQSSLDPIRR----SPVQDELTVPENLDSTMQLLFMACSGDVKG---VEDLLNEGIDVNSID-LDGRTALHIA 93 (163)
Q Consensus 22 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~---~~~ll~~~~~~~~~~-~~g~t~l~~a 93 (163)
...+.+++.++.+.+.+ +...+......+..|.||||+|+..|+.+. +++|++.|++++.++ ..|.||||+|
T Consensus 22 ~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A 101 (166)
T PHA02743 22 NTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIA 101 (166)
T ss_pred cHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Confidence 34455556666643332 233344445567789999999998877654 788889999998887 5799999999
Q ss_pred HhcCcHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 94 ACEGHVEVVKLLLS-KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 94 ~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
+..++.+++++|+. .|++++.++..|.||||+|+..++.+++++|+++|++++
T Consensus 102 ~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~ 155 (166)
T PHA02743 102 ASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCD 155 (166)
T ss_pred HHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999985 789999889999999999999999999999999998877
No 22
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.86 E-value=4.4e-22 Score=151.03 Aligned_cols=137 Identities=18% Similarity=0.185 Sum_probs=103.2
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHH-----HHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHH--hcCc
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLF-----MACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAA--CEGH 98 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~--~~~~ 98 (163)
.+...+..+.++.++..+......+..+.+|||+ |+..++.++++.|++.|++++..+..|.||||+|+ ..++
T Consensus 41 ~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~ 120 (480)
T PHA03100 41 LAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNS 120 (480)
T ss_pred hhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccCh
Confidence 3344466666666666666555666667788888 88888888888888888877777777888888888 7788
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 99 VEVVKLLLSKKANIDARDRWGSTAAADAKYYG--NVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 99 ~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g--~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|++.|++++..+..|.||||+|+..| +.+++++|+++|++++ +..|.||||+|+..|+
T Consensus 121 ~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~ 188 (480)
T PHA03100 121 YSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGN 188 (480)
T ss_pred HHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCC
Confidence 88888888888888777778888888888877 7888888888887765 5567788888877664
No 23
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.86 E-value=7.8e-21 Score=112.90 Aligned_cols=87 Identities=41% Similarity=0.571 Sum_probs=81.0
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 031235 57 LLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYN 136 (163)
Q Consensus 57 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~ 136 (163)
||+|+..|+.+++++|++.+.+++. |.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 7999999999999999999887765 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCC
Q 031235 137 ILKARGAKVPN 147 (163)
Q Consensus 137 ~Ll~~g~~~~~ 147 (163)
+|+++|++++.
T Consensus 77 ~Ll~~g~~~~~ 87 (89)
T PF12796_consen 77 LLLEHGADVNI 87 (89)
T ss_dssp HHHHTTT-TTS
T ss_pred HHHHcCCCCCC
Confidence 99999999874
No 24
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.86 E-value=5e-22 Score=158.78 Aligned_cols=137 Identities=15% Similarity=0.096 Sum_probs=96.7
Q ss_pred eeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHH
Q 031235 24 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 103 (163)
.+.++..++.+.++.++..+......+..|.||||+|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.++++
T Consensus 529 L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~ 608 (823)
T PLN03192 529 LLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFR 608 (823)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHH
Confidence 44555667878888888777777888889999999999999999999999999999999999999999887777776666
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+|+..++..+ ...+.++||.|+..|+.++++.|+++|++++ +.+|+||||+|+..|+
T Consensus 609 ~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~ 667 (823)
T PLN03192 609 ILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDH 667 (823)
T ss_pred HHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc
Confidence 6655443322 1223445555555555555555555555544 4455555555555543
No 25
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=3.6e-22 Score=140.59 Aligned_cols=119 Identities=26% Similarity=0.316 Sum_probs=94.8
Q ss_pred CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcC-CCCcccCC--------------------------------------
Q 031235 44 ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEG-IDVNSIDL-------------------------------------- 84 (163)
Q Consensus 44 ~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~-------------------------------------- 84 (163)
++.+.-+.+|.|+|||++..+++++|+.||..| ++++.+++
T Consensus 259 yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ 338 (452)
T KOG0514|consen 259 YVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQ 338 (452)
T ss_pred HHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhh
Confidence 344555566666777776667777776666655 45555554
Q ss_pred CCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCC--CCCCCceeeeeccCC
Q 031235 85 DGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKAR-GAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 85 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~-g~~~~--~~~~~t~l~~A~~~g 161 (163)
.|+|+|+.|+.+|+.++++.|+.+|+++|.+|.+|.|+|++|+.+||.|++++||.. ++++. +.+|-|+|-+|...|
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleag 418 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAG 418 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcC
Confidence 467777778889999999999999999999999999999999999999999999986 56644 889999999998887
Q ss_pred C
Q 031235 162 H 162 (163)
Q Consensus 162 ~ 162 (163)
|
T Consensus 419 h 419 (452)
T KOG0514|consen 419 H 419 (452)
T ss_pred c
Confidence 6
No 26
>PHA02946 ankyin-like protein; Provisional
Probab=99.86 E-value=1.8e-21 Score=146.14 Aligned_cols=129 Identities=16% Similarity=0.116 Sum_probs=94.0
Q ss_pred CCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCc--HHHHHHHHhcCC
Q 031235 33 LDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGH--VEVVKLLLSKKA 110 (163)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~--~~~~~~ll~~~~ 110 (163)
.+.++.++..+......+..|.||||+|+..|+.++++.|+++|++++.+|..|.||||+|+..++ .+++++|+..|+
T Consensus 52 ~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Ga 131 (446)
T PHA02946 52 ERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGA 131 (446)
T ss_pred HHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 344555666666677778889999999999999999999999999999999999999999876553 567777777777
Q ss_pred CCCC---------------------------------CCCCCCcHHHHHHHc--CCHHHHHHHHHcCCCCC--CCCCCce
Q 031235 111 NIDA---------------------------------RDRWGSTAAADAKYY--GNVEVYNILKARGAKVP--NGILHIF 153 (163)
Q Consensus 111 ~~~~---------------------------------~~~~~~t~l~~a~~~--g~~~~~~~Ll~~g~~~~--~~~~~t~ 153 (163)
+++. ++..|+||||+|+.. ++.+++++|++.|++++ +.+|.||
T Consensus 132 din~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~Tp 211 (446)
T PHA02946 132 KINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTP 211 (446)
T ss_pred CcccccCCCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCH
Confidence 6653 334455555555443 23466677777777765 5667777
Q ss_pred eeeeccCC
Q 031235 154 FHFRKPRG 161 (163)
Q Consensus 154 l~~A~~~g 161 (163)
||+|+.+|
T Consensus 212 LH~Aa~~~ 219 (446)
T PHA02946 212 LHIVCSKT 219 (446)
T ss_pred HHHHHHcC
Confidence 77777654
No 27
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.86 E-value=2.2e-21 Score=127.91 Aligned_cols=112 Identities=21% Similarity=0.236 Sum_probs=98.0
Q ss_pred CCchHHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHH---HHHHHhcCCCCCCCC-CCCCcH
Q 031235 51 LDSTMQLLFMACSGDV----KGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV---VKLLLSKKANIDARD-RWGSTA 122 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~---~~~ll~~~~~~~~~~-~~~~t~ 122 (163)
..+.+++|.||..|+. +++++|++.+..++..|..|.||||+|+..++.+. +++|+..|++++.++ ..|.||
T Consensus 18 ~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~Tp 97 (166)
T PHA02743 18 EDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTL 97 (166)
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcH
Confidence 4566789999999998 45556777888888889999999999999988654 799999999999998 589999
Q ss_pred HHHHHHcCCHHHHHHHHH-cCCCCC--CCCCCceeeeeccCCC
Q 031235 123 AADAKYYGNVEVYNILKA-RGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 123 l~~a~~~g~~~~~~~Ll~-~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
||+|+..|+.+++++|++ .|+++. +..|+||||+|+..|+
T Consensus 98 Lh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 98 LHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRD 140 (166)
T ss_pred HHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCC
Confidence 999999999999999995 799876 6788999999998775
No 28
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85 E-value=1.9e-21 Score=148.50 Aligned_cols=117 Identities=26% Similarity=0.329 Sum_probs=107.5
Q ss_pred CCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHh-cCC-CCCCCCCCCCcHH
Q 031235 46 TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS-KKA-NIDARDRWGSTAA 123 (163)
Q Consensus 46 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~-~~~-~~~~~~~~~~t~l 123 (163)
....+.+|.||||+||..|..+++..|+.+|++++.++.++.||||.||.+|++.+++-|++ .+. ..+..|..|.|||
T Consensus 266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpL 345 (929)
T KOG0510|consen 266 VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPL 345 (929)
T ss_pred hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCch
Confidence 44567789999999999999999999999999999999999999999999999999999998 553 4677788999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC-----CCCCCceeeeeccCCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP-----NGILHIFFHFRKPRGH 162 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~-----~~~~~t~l~~A~~~g~ 162 (163)
|.|++.||..++++|+..|+... +.+|.||||.|+..|+
T Consensus 346 Hlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~ 389 (929)
T KOG0510|consen 346 HLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGN 389 (929)
T ss_pred hhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhcc
Confidence 99999999999999999999976 7789999999999886
No 29
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.85 E-value=1.8e-21 Score=155.15 Aligned_cols=142 Identities=24% Similarity=0.254 Sum_probs=124.3
Q ss_pred ceeeeeecc-CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHH
Q 031235 22 NMRFSFGRQ-SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (163)
Q Consensus 22 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 100 (163)
-.++..+++ ++.+...-+.....+.......+.+++|.+...+....++.++++|++++.++..|.||||.|+.+|+.+
T Consensus 475 ~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~ 554 (1143)
T KOG4177|consen 475 FTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVD 554 (1143)
T ss_pred CcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCch
Confidence 344555555 4444444444445566677788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCCC
Q 031235 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGHL 163 (163)
Q Consensus 101 ~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~~ 163 (163)
+|++|++.|++++++++.|+||||.|+..|+.+|+++|+++|++++ +.++.|||++|+..|++
T Consensus 555 ~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~ 619 (1143)
T KOG4177|consen 555 LVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYL 619 (1143)
T ss_pred HHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhccc
Confidence 9999999999999999999999999999999999999999999998 77888999999999875
No 30
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.85 E-value=3.5e-21 Score=123.15 Aligned_cols=109 Identities=32% Similarity=0.323 Sum_probs=96.9
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGI-DVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
....+.+|+..+.+..|+.||+..+ .++.+|..|.||||.|+..|+.++++.|+.+|++++++...||||||.|+.-.+
T Consensus 63 p~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 63 PIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccc
Confidence 4455788999999999999998765 488999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC-CCCC-CceeeeeccCC
Q 031235 132 VEVYNILKARGAKVP-NGIL-HIFFHFRKPRG 161 (163)
Q Consensus 132 ~~~~~~Ll~~g~~~~-~~~~-~t~l~~A~~~g 161 (163)
.+++..|+++|++++ ..+| +||||+|+...
T Consensus 143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~r 174 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNR 174 (228)
T ss_pred hhHHHHHHhccCcccccccccchhhHHhhccc
Confidence 999999999999998 4444 59999998754
No 31
>PHA03095 ankyrin-like protein; Provisional
Probab=99.85 E-value=3.2e-21 Score=146.00 Aligned_cols=128 Identities=22% Similarity=0.176 Sum_probs=109.8
Q ss_pred cCCCCCCCcCCCCCCCCCchHHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcH--HHHHHHHhcCC
Q 031235 35 PIRRSPVQDELTVPENLDSTMQLLFMACS--GDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHV--EVVKLLLSKKA 110 (163)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~--g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~--~~~~~ll~~~~ 110 (163)
.++.++..+......+..|.||||+++.. ++.++++.|++.|++++.+|..|.||||+|+..++. .+++.++..|+
T Consensus 169 iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~ 248 (471)
T PHA03095 169 LLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGI 248 (471)
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCC
Confidence 34444444444444577799999998864 778889999999999999999999999999998875 57888999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 111 NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 111 ~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+++.++..|+||||+|+..|+.+++++|++.|++++ +.+|+|||++|+.+|+
T Consensus 249 din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~ 302 (471)
T PHA03095 249 SINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNN 302 (471)
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCC
Confidence 999999999999999999999999999999999987 7889999999998876
No 32
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85 E-value=1.6e-21 Score=141.41 Aligned_cols=149 Identities=23% Similarity=0.252 Sum_probs=126.5
Q ss_pred cCCCCCCceeeeeeccCCCCcCCCCCC-------CcCC--CCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Q 031235 15 SFDPRRNNMRFSFGRQSSLDPIRRSPV-------QDEL--TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLD 85 (163)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~ 85 (163)
+..+....+.+..++.|..+.++.++. ++.. -....++|.+||..|+.-||+++|+.|+.+|+++|....-
T Consensus 37 ~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~T 116 (615)
T KOG0508|consen 37 GEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRT 116 (615)
T ss_pred ccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccccccc
Confidence 334444566777788888887765443 1111 1224577889999888999999999999999999987777
Q ss_pred CChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCCC
Q 031235 86 GRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGHL 163 (163)
Q Consensus 86 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~~ 163 (163)
..|||-.||.-|+.+++++|++.|+++++.|+.|.|.|++|+..|+.+++++|++.|++++ ...|+|+||-+++.|++
T Consensus 117 NStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSV 196 (615)
T ss_pred CCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccH
Confidence 7899999999999999999999999999999999999999999999999999999999998 67889999999999874
No 33
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.84 E-value=4.1e-21 Score=149.80 Aligned_cols=128 Identities=14% Similarity=0.140 Sum_probs=99.4
Q ss_pred CCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCC--HHHHHHHHHcCCCCcccCCCCChHHHHH----------------
Q 031235 32 SLDPIRRSPVQDELTVPENLDSTMQLLFMACSGD--VKGVEDLLNEGIDVNSIDLDGRTALHIA---------------- 93 (163)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~--~~~~~~ll~~~~~~~~~~~~g~t~l~~a---------------- 93 (163)
+.+.++.++..+......+..|.||||+|+..|+ .++++.|+++|++++.++..|.||||+|
T Consensus 191 ~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLi 270 (764)
T PHA02716 191 DIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYI 270 (764)
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHH
Confidence 3455555565666666677788888988888875 4788888888888888888888888865
Q ss_pred ---------------------HhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCC--CC
Q 031235 94 ---------------------ACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY--YGNVEVYNILKARGAKVP--NG 148 (163)
Q Consensus 94 ---------------------~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~--~g~~~~~~~Ll~~g~~~~--~~ 148 (163)
+..|+.+++++|++.|++++.+|..|+||||+|+. .++.+++++|++.|++++ +.
T Consensus 271 e~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~ 350 (764)
T PHA02716 271 ESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDN 350 (764)
T ss_pred HhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCC
Confidence 33466778888888888888888888899888754 457888888888888876 66
Q ss_pred CCCceeeeecc
Q 031235 149 ILHIFFHFRKP 159 (163)
Q Consensus 149 ~~~t~l~~A~~ 159 (163)
.|+||||+|+.
T Consensus 351 ~G~TPLH~A~~ 361 (764)
T PHA02716 351 IGNTVLHTYLS 361 (764)
T ss_pred CCCCHHHHHHH
Confidence 77888888753
No 34
>PHA02798 ankyrin-like protein; Provisional
Probab=99.84 E-value=1.5e-20 Score=143.07 Aligned_cols=47 Identities=11% Similarity=0.085 Sum_probs=34.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 116 DRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 116 ~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|..|.||||+|+..|+.+++++|++.|++++ +..|+|||++|+..|+
T Consensus 255 d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~ 303 (489)
T PHA02798 255 DELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENES 303 (489)
T ss_pred CcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCc
Confidence 3456777777777777777777777777766 6667777777777654
No 35
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.84 E-value=6.4e-21 Score=148.73 Aligned_cols=130 Identities=18% Similarity=0.064 Sum_probs=108.2
Q ss_pred cCCCCcCCCCCCCc-CCCCCC-CCCchHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCc--HHHHH
Q 031235 30 QSSLDPIRRSPVQD-ELTVPE-NLDSTMQLLFMAC--SGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGH--VEVVK 103 (163)
Q Consensus 30 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~~a~~--~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~--~~~~~ 103 (163)
..+.+.++.++..+ ...... +..|.||||+|+. .++.+++++|+++|++++.++..|.||||+|+..|+ .++++
T Consensus 152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVk 231 (764)
T PHA02716 152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIK 231 (764)
T ss_pred CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHH
Confidence 34445555555555 333334 6789999999864 467899999999999999999999999999999985 58999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHHcCCCCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADA-------------------------------------KYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a-------------------------------------~~~g~~~~~~~Ll~~g~~~~ 146 (163)
+|++.|++++.++..|+||||+| +..|+.+++++|++.|++++
T Consensus 232 lLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN 311 (764)
T PHA02716 232 KIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH 311 (764)
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee
Confidence 99999999999999999999975 34578899999999999987
Q ss_pred --CCCCCceeeeecc
Q 031235 147 --NGILHIFFHFRKP 159 (163)
Q Consensus 147 --~~~~~t~l~~A~~ 159 (163)
+..|+||||+|+.
T Consensus 312 ~kD~~G~TPLH~Aaa 326 (764)
T PHA02716 312 YKDSAGRTCLHQYIL 326 (764)
T ss_pred ccCCCCCCHHHHHHH
Confidence 7789999999764
No 36
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.84 E-value=9.4e-21 Score=144.28 Aligned_cols=132 Identities=20% Similarity=0.186 Sum_probs=105.7
Q ss_pred CCCCcCCCCCCCcCCC-CCCCCCchHHHHHHHHc--CCHHHHHHHHHcCCCCcc-cCCCCChHHHHHHhcC----cHHHH
Q 031235 31 SSLDPIRRSPVQDELT-VPENLDSTMQLLFMACS--GDVKGVEDLLNEGIDVNS-IDLDGRTALHIAACEG----HVEVV 102 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~a~~~--g~~~~~~~ll~~~~~~~~-~~~~g~t~l~~a~~~~----~~~~~ 102 (163)
+..+.++.++..+... ...+..|.||||+|+.. ++.++++.|+++|++++. .+..|.||||+|+..+ +.+++
T Consensus 122 ~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv 201 (494)
T PHA02989 122 NNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVI 201 (494)
T ss_pred CcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHH
Confidence 4455555555566555 56677899999988753 678999999999998877 5678889999886654 78888
Q ss_pred HHHHhcCCCCCC--------------------------------------CCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 031235 103 KLLLSKKANIDA--------------------------------------RDRWGSTAAADAKYYGNVEVYNILKARGAK 144 (163)
Q Consensus 103 ~~ll~~~~~~~~--------------------------------------~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~ 144 (163)
++|++.|++++. +|..|+||||+|+..|+.+++++|+++|++
T Consensus 202 ~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gad 281 (494)
T PHA02989 202 KYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDD 281 (494)
T ss_pred HHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCC
Confidence 888888776543 445699999999999999999999999999
Q ss_pred CC--CCCCCceeeeeccCCC
Q 031235 145 VP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 145 ~~--~~~~~t~l~~A~~~g~ 162 (163)
++ +..|.||||+|+..|+
T Consensus 282 in~~d~~G~TpL~~A~~~~~ 301 (494)
T PHA02989 282 IYNVSKDGDTVLTYAIKHGN 301 (494)
T ss_pred ccccCCCCCCHHHHHHHcCC
Confidence 87 7788999999999876
No 37
>PHA02946 ankyin-like protein; Provisional
Probab=99.83 E-value=7.3e-21 Score=142.83 Aligned_cols=111 Identities=14% Similarity=0.133 Sum_probs=87.1
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcC--cHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEG--HVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
+..|.|||| |+..++.++++.|++.|++++.+|..|.||||+|+..+ +.+++++|++.|++++.+|..|.||||+|+
T Consensus 138 d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa 216 (446)
T PHA02946 138 DEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVC 216 (446)
T ss_pred CCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 444555554 34445566666666666666666777888888877654 468899999999999999999999999999
Q ss_pred HcC--CHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 128 YYG--NVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 128 ~~g--~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
..+ +.+++++|++ |++++ +..|+||||+|+..++
T Consensus 217 ~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~ 254 (446)
T PHA02946 217 SKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLS 254 (446)
T ss_pred HcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCC
Confidence 976 8899999985 88877 7789999999998765
No 38
>PHA02795 ankyrin-like protein; Provisional
Probab=99.83 E-value=1.7e-20 Score=138.19 Aligned_cols=130 Identities=19% Similarity=0.148 Sum_probs=105.8
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC------CCCChHHHHHHhcCcHHHHHH
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID------LDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~------~~g~t~l~~a~~~~~~~~~~~ 104 (163)
++.+.++-++..+..... ..+.||+|+|+..++.+++++|+.+|++..... ..+.+++|.|+..++.+++++
T Consensus 129 n~~eiV~~LI~~GADIn~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~ 206 (437)
T PHA02795 129 VEIDIVDFMVDHGAVIYK--IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKL 206 (437)
T ss_pred CCHHHHHHHHHCCCCCCC--CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHH
Confidence 455555555555544333 244789999998999999999999887432211 236788889999999999999
Q ss_pred HHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 105 ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|+..|++++.++..|.||||+|+..|+.+++++|+++|++++ +..|.||||+|+..|+
T Consensus 207 LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 207 CIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred HHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 999999999999999999999999999999999999999987 7788999999999884
No 39
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.83 E-value=8.9e-21 Score=123.68 Aligned_cols=112 Identities=21% Similarity=0.273 Sum_probs=64.1
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCC-------CCcccCCCCChHHHHHHhcCcHH---HHHHHHhcCCCCCCCC-C
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGI-------DVNSIDLDGRTALHIAACEGHVE---VVKLLLSKKANIDARD-R 117 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~-------~~~~~~~~g~t~l~~a~~~~~~~---~~~~ll~~~~~~~~~~-~ 117 (163)
.+..|.||||+|+..|+... .+...+. .+..++..|.||||+|+..++.+ ++++|+..|++++.++ .
T Consensus 13 ~d~~g~tpLh~A~~~g~~~~--l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~ 90 (154)
T PHA02736 13 PDIEGENILHYLCRNGGVTD--LLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERV 90 (154)
T ss_pred cCCCCCCHHHHHHHhCCHHH--HHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCC
Confidence 34456666666666666321 1111111 12234556666666666666543 4566666666666665 3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHH-cCCCCC--CCCCCceeeeeccCCC
Q 031235 118 WGSTAAADAKYYGNVEVYNILKA-RGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 118 ~~~t~l~~a~~~g~~~~~~~Ll~-~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|.||||+|+..|+.+++++|+. .|++++ +..|+||||+|+..|+
T Consensus 91 ~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~ 138 (154)
T PHA02736 91 FGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHD 138 (154)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCC
Confidence 66666666666666666666665 366554 5556666666666554
No 40
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.5e-20 Score=129.40 Aligned_cols=133 Identities=29% Similarity=0.305 Sum_probs=114.9
Q ss_pred eeeccCCCCcCCCCCC-CcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPV-QDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 104 (163)
.+++.++.-.++-.+. .....+..+.-|..||||||..|+..+++.|+..|+.++..+....||||.|+..||.+++..
T Consensus 6 ~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqk 85 (448)
T KOG0195|consen 6 GWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQK 85 (448)
T ss_pred hhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHH
Confidence 3444444444444332 344556677789999999999999999999999999999988888999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeec
Q 031235 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRK 158 (163)
Q Consensus 105 ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~ 158 (163)
|+.+.+++|+.+.-|.||||+|+--|...+.+-|+..|+.+. |++|.|||+.|.
T Consensus 86 ll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 86 LLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred HHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence 999999999999999999999999999999999999999865 999999998764
No 41
>PHA02798 ankyrin-like protein; Provisional
Probab=99.82 E-value=2.3e-20 Score=141.99 Aligned_cols=130 Identities=18% Similarity=0.159 Sum_probs=113.9
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHc-----CCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcC---cHHHH
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACS-----GDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEG---HVEVV 102 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~-----g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~---~~~~~ 102 (163)
.+.+.++.++..+......+..|.||||.++.. +..+++++|+++|++++.++..|.||||+|+..+ +.+++
T Consensus 49 ~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv 128 (489)
T PHA02798 49 PSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEIL 128 (489)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHH
Confidence 455667777777777777888999999998753 6789999999999999999999999999999875 78999
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCC---CCCCCceeeeeccC
Q 031235 103 KLLLSKKANIDARDRWGSTAAADAKYYGN---VEVYNILKARGAKVP---NGILHIFFHFRKPR 160 (163)
Q Consensus 103 ~~ll~~~~~~~~~~~~~~t~l~~a~~~g~---~~~~~~Ll~~g~~~~---~~~~~t~l~~A~~~ 160 (163)
++|++.|++++..+..|.||||+|+..++ .+++++|+++|++++ +..+.||||.++..
T Consensus 129 ~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~ 192 (489)
T PHA02798 129 LFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKY 192 (489)
T ss_pred HHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHh
Confidence 99999999999999999999999999988 999999999999986 34577999987653
No 42
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.82 E-value=7.4e-20 Score=144.16 Aligned_cols=119 Identities=22% Similarity=0.229 Sum_probs=84.1
Q ss_pred CcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCc-HHHHHHHHhcCCCCCCCCCCCC
Q 031235 42 QDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGH-VEVVKLLLSKKANIDARDRWGS 120 (163)
Q Consensus 42 ~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~ll~~~~~~~~~~~~~~ 120 (163)
.+......+..|.||||+|+..|+.++++.|++.|++++..+..|.||||+|+..++ ..++++|++.|++++.+|..|+
T Consensus 364 ~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~ 443 (682)
T PHA02876 364 LGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLS 443 (682)
T ss_pred cCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCC
Confidence 333444555667777777777777777777777777777777777777777766544 3456777777777777777778
Q ss_pred cHHHHHHHcC-CHHHHHHHHHcCCCCC--CCCCCceeeeeccC
Q 031235 121 TAAADAKYYG-NVEVYNILKARGAKVP--NGILHIFFHFRKPR 160 (163)
Q Consensus 121 t~l~~a~~~g-~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~ 160 (163)
||||+|+..+ +.+++++|++.|++++ +..|.||+++|+.+
T Consensus 444 TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~ 486 (682)
T PHA02876 444 TPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEY 486 (682)
T ss_pred hHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh
Confidence 8888877765 5677788888877766 66677777777654
No 43
>PHA02917 ankyrin-like protein; Provisional
Probab=99.82 E-value=5.1e-20 Score=143.49 Aligned_cols=107 Identities=17% Similarity=0.181 Sum_probs=89.7
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHH--hcCcHHHHHHHHhcCCCCCCCCC---CC-----------
Q 031235 56 QLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAA--CEGHVEVVKLLLSKKANIDARDR---WG----------- 119 (163)
Q Consensus 56 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~---~~----------- 119 (163)
++++|+..++.+++++|+++|++++.+|..|.||||+++ ..++.+++++|++.|++++..+. .|
T Consensus 106 ~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~ 185 (661)
T PHA02917 106 FSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNC 185 (661)
T ss_pred HHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccccc
Confidence 344455556778899999999999999999999999653 56899999999999999986543 23
Q ss_pred CcHHHHHHH-----------cCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 120 STAAADAKY-----------YGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 120 ~t~l~~a~~-----------~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.||||+|+. .++.+++++|++.|++++ +.+|.||||+|+..|+
T Consensus 186 ~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~ 241 (661)
T PHA02917 186 GTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSH 241 (661)
T ss_pred ccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCC
Confidence 599999976 468999999999999988 6788999999999886
No 44
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.81 E-value=1.9e-19 Score=119.35 Aligned_cols=138 Identities=22% Similarity=0.190 Sum_probs=117.7
Q ss_pred eeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHH
Q 031235 24 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 103 (163)
.+-++..++++..+..+..+.-....+.-+++|+.+++..-+.+.+..+.+ ..+|..|..|.|||+||+.+|+.++++
T Consensus 100 ~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~--n~VN~~De~GfTpLiWAaa~G~i~vV~ 177 (296)
T KOG0502|consen 100 LLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVN--NKVNACDEFGFTPLIWAAAKGHIPVVQ 177 (296)
T ss_pred hhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhh--ccccCccccCchHhHHHHhcCchHHHH
Confidence 344455566666666666777777788889999999998887777655544 357788999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGHL 163 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~~ 163 (163)
+|++.|+++.+..+...++|..|++.|.+++|++|+.++.+++ +-+|-|||-+|++-||.
T Consensus 178 fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhv 239 (296)
T KOG0502|consen 178 FLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHV 239 (296)
T ss_pred HHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChH
Confidence 9999999999999999999999999999999999999999988 66777999999998773
No 45
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.80 E-value=8.9e-20 Score=138.95 Aligned_cols=105 Identities=18% Similarity=0.218 Sum_probs=57.2
Q ss_pred CCcCCCCCCCCCchHHHHHHHHc---CCHHHHHHHHHcCCCC-cccCCCCChHHHHHHhc--CcHHHHHHHHhcCCCCCC
Q 031235 41 VQDELTVPENLDSTMQLLFMACS---GDVKGVEDLLNEGIDV-NSIDLDGRTALHIAACE--GHVEVVKLLLSKKANIDA 114 (163)
Q Consensus 41 ~~~~~~~~~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~-~~~~~~g~t~l~~a~~~--~~~~~~~~ll~~~~~~~~ 114 (163)
..+......+..|.||||.|+.. ++.+++++|+++|+++ +.++..|.||||+|+.. ++.+++++|++.|++++.
T Consensus 96 ~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~ 175 (494)
T PHA02989 96 KFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFE 175 (494)
T ss_pred HCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 33333444445556666655432 4556666666666665 45555566666655432 355566666666666555
Q ss_pred -CCCCCCcHHHHHHHcC----CHHHHHHHHHcCCCC
Q 031235 115 -RDRWGSTAAADAKYYG----NVEVYNILKARGAKV 145 (163)
Q Consensus 115 -~~~~~~t~l~~a~~~g----~~~~~~~Ll~~g~~~ 145 (163)
.+..|.||||+|++.+ +.+++++|++.|+++
T Consensus 176 ~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~v 211 (494)
T PHA02989 176 KTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI 211 (494)
T ss_pred cccccCCChHHHHHhcccccccHHHHHHHHhCCCCc
Confidence 3455566666555432 556666666665554
No 46
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.80 E-value=3.1e-19 Score=142.91 Aligned_cols=114 Identities=28% Similarity=0.329 Sum_probs=106.7
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 129 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~ 129 (163)
+....++|+.||..|+.+.++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~ 601 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA 601 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh
Confidence 33467889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCceeeeeccCCCC
Q 031235 130 GNVEVYNILKARGAKVPNGILHIFFHFRKPRGHL 163 (163)
Q Consensus 130 g~~~~~~~Ll~~g~~~~~~~~~t~l~~A~~~g~~ 163 (163)
|+.+++++|++.++..+...+.++||+|+..|++
T Consensus 602 g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~ 635 (823)
T PLN03192 602 KHHKIFRILYHFASISDPHAAGDLLCTAAKRNDL 635 (823)
T ss_pred CCHHHHHHHHhcCcccCcccCchHHHHHHHhCCH
Confidence 9999999999998887777788999999998863
No 47
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.80 E-value=4.3e-19 Score=139.86 Aligned_cols=110 Identities=27% Similarity=0.207 Sum_probs=53.2
Q ss_pred CchHHHHHHHHc-CCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 031235 52 DSTMQLLFMACS-GDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG 130 (163)
Q Consensus 52 ~~~~~l~~a~~~-g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g 130 (163)
.|.||||+|+.. ++.++++.|++.|++++.+|..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..+
T Consensus 340 ~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~ 419 (682)
T PHA02876 340 LYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGT 419 (682)
T ss_pred CCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcC
Confidence 344444444432 2344444444444444444444555555555555555555555555555544445555555554433
Q ss_pred C-HHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 131 N-VEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 131 ~-~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
+ ..++++|+++|++++ +..|+||||+|+..|
T Consensus 420 ~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 420 NPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred CHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence 2 234455555555544 445556666665543
No 48
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.79 E-value=3.9e-19 Score=115.91 Aligned_cols=98 Identities=22% Similarity=0.238 Sum_probs=90.0
Q ss_pred CCCCchHHHHHHHHcCCHH---HHHHHHHcCCCCcccC-CCCChHHHHHHhcCcHHHHHHHHh-cCCCCCCCCCCCCcHH
Q 031235 49 ENLDSTMQLLFMACSGDVK---GVEDLLNEGIDVNSID-LDGRTALHIAACEGHVEVVKLLLS-KKANIDARDRWGSTAA 123 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~---~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~l 123 (163)
.+..|.||||+|+..|+.+ .++.|++.|++++.++ ..|.||||+|+..++.+++++|+. .|++++.++..|.|||
T Consensus 51 ~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL 130 (154)
T PHA02736 51 YNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPY 130 (154)
T ss_pred hcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHH
Confidence 4677999999999998874 6888999999999988 489999999999999999999997 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
|+|+..|+.+++++|+..|++.+
T Consensus 131 ~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 131 YVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999999998764
No 49
>PHA02741 hypothetical protein; Provisional
Probab=99.78 E-value=1.4e-18 Score=114.92 Aligned_cols=126 Identities=19% Similarity=0.207 Sum_probs=103.7
Q ss_pred CceeeeeeccCCCCcCCCCC------CCcCCCCCCCCCchHHHHHHHHcCC----HHHHHHHHHcCCCCcccCC-CCChH
Q 031235 21 NNMRFSFGRQSSLDPIRRSP------VQDELTVPENLDSTMQLLFMACSGD----VKGVEDLLNEGIDVNSIDL-DGRTA 89 (163)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~a~~~g~----~~~~~~ll~~~~~~~~~~~-~g~t~ 89 (163)
......+++.++.+.++.+. ..+......+..|.||||+|+..|+ .+++++|+..|++++.++. .|.||
T Consensus 22 ~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~Tp 101 (169)
T PHA02741 22 ENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTA 101 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCH
Confidence 34444555567766655431 1123345567789999999999998 5889999999999999885 89999
Q ss_pred HHHHHhcCcHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 90 LHIAACEGHVEVVKLLLS-KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 90 l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
||+|+..++.+++++|+. .|++++..+..|.|||+.|+..++.+++++|++.++...
T Consensus 102 Lh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~~ 159 (169)
T PHA02741 102 LHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATSR 159 (169)
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHhc
Confidence 999999999999999997 599999999999999999999999999999999876643
No 50
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.78 E-value=6.5e-19 Score=112.83 Aligned_cols=133 Identities=21% Similarity=0.200 Sum_probs=109.7
Q ss_pred ccCCCCcCCCCCCCc-CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHh
Q 031235 29 RQSSLDPIRRSPVQD-ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS 107 (163)
Q Consensus 29 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 107 (163)
-++....+++++... .-....+.++.||||.|++.|+.++++.|+..|++...+...|+||||-||.-++.+|+.+|++
T Consensus 72 e~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLq 151 (228)
T KOG0512|consen 72 EKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQ 151 (228)
T ss_pred hhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHh
Confidence 345555666655543 4456678889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHH-cCCC--CCCCCCCceeeeeccCC
Q 031235 108 KKANIDARDRWGSTAAADAKYYGNVE-VYNILKA-RGAK--VPNGILHIFFHFRKPRG 161 (163)
Q Consensus 108 ~~~~~~~~~~~~~t~l~~a~~~g~~~-~~~~Ll~-~g~~--~~~~~~~t~l~~A~~~g 161 (163)
.|+++++.....+||||.|+...+.. .+++|+. ++.. +.+..+.||+.+|-+.|
T Consensus 152 hgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 152 HGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred ccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 99999999999999999999876555 4555554 3444 34667789999987653
No 51
>PHA02917 ankyrin-like protein; Provisional
Probab=99.78 E-value=6.9e-19 Score=137.20 Aligned_cols=127 Identities=13% Similarity=0.041 Sum_probs=79.5
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHH
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVK----GVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLL 106 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~----~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 106 (163)
++.+.++.++..+......+..|.||||+|+..|+.+ +++.|++.+...+..+ ..+++++|+..++.+++++|+
T Consensus 46 ~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll 123 (661)
T PHA02917 46 NNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLV 123 (661)
T ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHH
Confidence 3344444444444444444444555555555554422 2334444322222211 113344455555678899999
Q ss_pred hcCCCCCCCCCCCCcHHHHH--HHcCCHHHHHHHHHcCCCCC--CC---CC-----------Cceeeeecc
Q 031235 107 SKKANIDARDRWGSTAAADA--KYYGNVEVYNILKARGAKVP--NG---IL-----------HIFFHFRKP 159 (163)
Q Consensus 107 ~~~~~~~~~~~~~~t~l~~a--~~~g~~~~~~~Ll~~g~~~~--~~---~~-----------~t~l~~A~~ 159 (163)
+.|++++.++..|.|||+.+ +..|+.+++++|+++|++++ +. .| .||||+|+.
T Consensus 124 ~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~ 194 (661)
T PHA02917 124 EHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYII 194 (661)
T ss_pred HcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHh
Confidence 99999999999999999964 35789999999999999985 21 23 499999975
No 52
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.77 E-value=2.9e-19 Score=131.14 Aligned_cols=139 Identities=25% Similarity=0.246 Sum_probs=123.8
Q ss_pred eeeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHH
Q 031235 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (163)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 102 (163)
..+..+.+++.+.++.++..+......+.+|.|+||.+|.-.+.++|++|++.|++++.+|..|+||||.|+..|+..++
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~ 122 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIV 122 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHH
Confidence 44667778999999998888877788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCC-----------------------------------------------------------CCCCcHH
Q 031235 103 KLLLSKKANIDARD-----------------------------------------------------------RWGSTAA 123 (163)
Q Consensus 103 ~~ll~~~~~~~~~~-----------------------------------------------------------~~~~t~l 123 (163)
++++..|+++-+.| ..|-|.|
T Consensus 123 ~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~l 202 (527)
T KOG0505|consen 123 EYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATAL 202 (527)
T ss_pred HHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHH
Confidence 99999888743322 1578999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
|.|+..|..++.++|++.|.++. +.+||||||.|+.=|
T Consensus 203 HvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg 242 (527)
T KOG0505|consen 203 HVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWG 242 (527)
T ss_pred HHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhh
Confidence 99999999999999999999976 889999999998654
No 53
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.77 E-value=3.4e-19 Score=136.36 Aligned_cols=136 Identities=23% Similarity=0.240 Sum_probs=93.6
Q ss_pred eeccCCCCcCCCCCCCc-----CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCC---------------cccCCCC
Q 031235 27 FGRQSSLDPIRRSPVQD-----ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDV---------------NSIDLDG 86 (163)
Q Consensus 27 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~---------------~~~~~~g 86 (163)
.++.+..+.++-++.+. .-....+.++.+|||.|+..|+.++++.+|..|... +..|+.|
T Consensus 194 aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg 273 (929)
T KOG0510|consen 194 AARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDG 273 (929)
T ss_pred HHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccC
Confidence 34445555555444422 222334455777888888888888888887765321 2345677
Q ss_pred ChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCC---CCCCCceeeeeccCCC
Q 031235 87 RTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKA-RGAKVP---NGILHIFFHFRKPRGH 162 (163)
Q Consensus 87 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~-~g~~~~---~~~~~t~l~~A~~~g~ 162 (163)
.||||+|+..|+.++++.|+..|++++.++.++.||||.|+++|+..+++-|++ .+..+- +..|.||||+|++.||
T Consensus 274 ~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH 353 (929)
T KOG0510|consen 274 CTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGH 353 (929)
T ss_pred CchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCH
Confidence 888888888888888888888888888888888888888888888888888877 444322 4456688888887776
No 54
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.76 E-value=1.6e-17 Score=103.89 Aligned_cols=113 Identities=41% Similarity=0.561 Sum_probs=103.1
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 129 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~ 129 (163)
+..|.||||+|+..++.+++++|+..+.+.+..+..|.+|+++|+..+..+++++++..+..++..+..+.||+|+|+..
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 35689999999999999999999999998788889999999999999999999999999988888889999999999999
Q ss_pred CCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 130 GNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 130 g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++.+++++|++.+.+.+ +..+.||+++|...++
T Consensus 84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 118 (126)
T cd00204 84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGH 118 (126)
T ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCC
Confidence 99999999999986655 6677899999987654
No 55
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.76 E-value=3.3e-18 Score=98.61 Aligned_cols=99 Identities=30% Similarity=0.475 Sum_probs=86.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 031235 55 MQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEV 134 (163)
Q Consensus 55 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~ 134 (163)
..+.|+..+|.++-|+..+..|.+++..- .|++|||+|+-+|+..+++||+..|++++.+|+.|.|||-.|++.||.+|
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence 35788899999999999999998877644 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCC--CCCCCcee
Q 031235 135 YNILKARGAKVP--NGILHIFF 154 (163)
Q Consensus 135 ~~~Ll~~g~~~~--~~~~~t~l 154 (163)
|++|++.|++-. -.+|.+.+
T Consensus 83 VklLL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 83 VKLLLQNGADRTIHAPDGTALI 104 (117)
T ss_pred HHHHHHcCcccceeCCCchhHH
Confidence 999999999854 33444433
No 56
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.75 E-value=1.5e-18 Score=138.69 Aligned_cols=128 Identities=27% Similarity=0.207 Sum_probs=111.6
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCC
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 110 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 110 (163)
+.......+...+-+....+..+.||||.||.+|+.+.|++|+++|++++.++..|+||||.||..|+.+|+++|+++|+
T Consensus 518 ~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA 597 (1143)
T KOG4177|consen 518 DTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGA 597 (1143)
T ss_pred hhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCC
Confidence 33334444455566666777789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CC--CCCCCceeeeec
Q 031235 111 NIDARDRWGSTAAADAKYYGNVEVYNILKARGAK-----VP--NGILHIFFHFRK 158 (163)
Q Consensus 111 ~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~-----~~--~~~~~t~l~~A~ 158 (163)
.++..+.+|.|||++|+..|+.+++++|+..++. .. +..|.+|...+.
T Consensus 598 ~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e 652 (1143)
T KOG4177|consen 598 SVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAE 652 (1143)
T ss_pred CCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHH
Confidence 9999999999999999999999999999999988 33 556777776543
No 57
>PHA02795 ankyrin-like protein; Provisional
Probab=99.75 E-value=1.3e-17 Score=123.06 Aligned_cols=95 Identities=22% Similarity=0.190 Sum_probs=90.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC-
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG- 130 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g- 130 (163)
.+.+++|.|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|
T Consensus 187 ~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 187 IQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred hccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4678899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -------CHHHHHHHHHcCCCCC
Q 031235 131 -------NVEVYNILKARGAKVP 146 (163)
Q Consensus 131 -------~~~~~~~Ll~~g~~~~ 146 (163)
+.+++++|+++|++++
T Consensus 267 ~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 267 VIARRETHLKILEILLREPLSID 289 (437)
T ss_pred cccccccHHHHHHHHHhCCCCCC
Confidence 4699999999999876
No 58
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.75 E-value=5e-18 Score=120.55 Aligned_cols=116 Identities=19% Similarity=0.089 Sum_probs=97.5
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCC----CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPE----NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHV 99 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~ 99 (163)
..+...++.+.++.++..+...... +..|.||||+|+..++.+++++|+++|++++.++ ..|.||||+|+..++.
T Consensus 38 ~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~ 117 (300)
T PHA02884 38 YSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCL 117 (300)
T ss_pred HHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCH
Confidence 3334446677777666666554443 3579999999999999999999999999999864 5799999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 031235 100 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKA 140 (163)
Q Consensus 100 ~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~ 140 (163)
+++++|+..|++++.++..|.||||+|+..++.+++..+..
T Consensus 118 eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~ 158 (300)
T PHA02884 118 KCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICD 158 (300)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC
Confidence 99999999999999999999999999999888887766553
No 59
>PHA02730 ankyrin-like protein; Provisional
Probab=99.74 E-value=8.3e-18 Score=129.54 Aligned_cols=110 Identities=18% Similarity=0.153 Sum_probs=95.0
Q ss_pred CCCchHHHHHHHHcCC----HHHHHHHHHcCC--CCcccCCCCChHHHH---HHhcC---------cHHHHHHHHhcCCC
Q 031235 50 NLDSTMQLLFMACSGD----VKGVEDLLNEGI--DVNSIDLDGRTALHI---AACEG---------HVEVVKLLLSKKAN 111 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~----~~~~~~ll~~~~--~~~~~~~~g~t~l~~---a~~~~---------~~~~~~~ll~~~~~ 111 (163)
...|.||||+|+..+. .+++++|+++|+ +++.++..|.||||. +...+ ..+++++|+..|++
T Consensus 375 k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD 454 (672)
T PHA02730 375 TTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDD 454 (672)
T ss_pred CCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccc
Confidence 4689999999998774 899999999997 588889999999984 33222 23569999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CC-CCCceeeeecc
Q 031235 112 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NG-ILHIFFHFRKP 159 (163)
Q Consensus 112 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~-~~~t~l~~A~~ 159 (163)
++.+|..|.||||+|+..++.+++++|+++|++++ +. .|.||||+|+.
T Consensus 455 INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 455 IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSY 505 (672)
T ss_pred hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHH
Confidence 99999999999999999999999999999999987 33 47999999976
No 60
>PHA02730 ankyrin-like protein; Provisional
Probab=99.72 E-value=6.2e-17 Score=124.78 Aligned_cols=116 Identities=15% Similarity=0.119 Sum_probs=99.4
Q ss_pred CCCCCCchHHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCChHHHHHHhcC--cHHHHHHHHhcCC--CCCCCCCCC
Q 031235 47 VPENLDSTMQLLFMACSG---DVKGVEDLLNEGIDVNSIDLDGRTALHIAACEG--HVEVVKLLLSKKA--NIDARDRWG 119 (163)
Q Consensus 47 ~~~~~~~~~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~--~~~~~~~ll~~~~--~~~~~~~~~ 119 (163)
..++..|.||||+|+..+ +.++++.|+++|++++.+|..|.||||+|+..+ +.+++++|+..|+ +++..+..+
T Consensus 35 ~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~ 114 (672)
T PHA02730 35 KHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIN 114 (672)
T ss_pred hhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccC
Confidence 356677999999999986 599999999999999999999999999999976 7999999999965 457777778
Q ss_pred CcHHHHHHH--cCCHHHHHHHHH-cCCCCC---C----CCCCceeeeeccCCC
Q 031235 120 STAAADAKY--YGNVEVYNILKA-RGAKVP---N----GILHIFFHFRKPRGH 162 (163)
Q Consensus 120 ~t~l~~a~~--~g~~~~~~~Ll~-~g~~~~---~----~~~~t~l~~A~~~g~ 162 (163)
.+|++.++. .++.+++++|+. .+++++ + ..+-+|+++|...++
T Consensus 115 d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~ 167 (672)
T PHA02730 115 DFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPR 167 (672)
T ss_pred CchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCc
Confidence 899998888 899999999997 666755 1 356799999998775
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.72 E-value=2.7e-17 Score=130.78 Aligned_cols=114 Identities=23% Similarity=0.223 Sum_probs=98.5
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC--------------CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCC
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID--------------LDGRTALHIAACEGHVEVVKLLLSKKANIDAR 115 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~ 115 (163)
...|.||||+|+..|+.++++.|+++|++++.++ ..|.+|||.|+..++.+++++|++.|++++.+
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~ 204 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA 204 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence 3469999999999999999999999999988643 25899999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHcC---------CHHHHHHHHHcCCCC---------CCCCCCceeeeeccCCCC
Q 031235 116 DRWGSTAAADAKYYG---------NVEVYNILKARGAKV---------PNGILHIFFHFRKPRGHL 163 (163)
Q Consensus 116 ~~~~~t~l~~a~~~g---------~~~~~~~Ll~~g~~~---------~~~~~~t~l~~A~~~g~~ 163 (163)
|..|+||||+|+..+ ...+.+++++.++.. .|.+|.|||++|+..|+.
T Consensus 205 d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~ 270 (743)
T TIGR00870 205 DSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRI 270 (743)
T ss_pred hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCc
Confidence 999999999999986 334667777765553 367899999999998863
No 62
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.70 E-value=1.8e-17 Score=131.86 Aligned_cols=78 Identities=28% Similarity=0.397 Sum_probs=68.7
Q ss_pred CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--C
Q 031235 84 LDGRTALHIAACEGHVEVVKLLLSKKANIDARD--------------RWGSTAAADAKYYGNVEVYNILKARGAKVP--N 147 (163)
Q Consensus 84 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~--------------~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~ 147 (163)
..|.||||+|+..++.+++++|++.|++++.++ ..|.|||+.|+..|+.+++++|++.|++++ +
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d 205 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTAD 205 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHh
Confidence 458999999999999999999999999988653 258899999999999999999999998876 7
Q ss_pred CCCCceeeeeccCC
Q 031235 148 GILHIFFHFRKPRG 161 (163)
Q Consensus 148 ~~~~t~l~~A~~~g 161 (163)
..|+||||+|+..+
T Consensus 206 ~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 206 SLGNTLLHLLVMEN 219 (743)
T ss_pred hhhhHHHHHHHhhh
Confidence 77899999998765
No 63
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.70 E-value=2.2e-17 Score=113.87 Aligned_cols=102 Identities=29% Similarity=0.302 Sum_probs=87.5
Q ss_pred HHcCCHHHHHHHHH-cCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 031235 61 ACSGDVKGVEDLLN-EGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILK 139 (163)
Q Consensus 61 ~~~g~~~~~~~ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll 139 (163)
|+.|+.-.++.-+. ..-+.+.-|..|.+|||||+..|+..+++.|+..|+++|..+....||||.|+.+||-++++.|+
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll 87 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLL 87 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHH
Confidence 44455433443333 34467777899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCC--CCCCCceeeeeccCCC
Q 031235 140 ARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 140 ~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++.++++ |..|+||||+||.-|+
T Consensus 88 ~~kadvnavnehgntplhyacfwgy 112 (448)
T KOG0195|consen 88 SRKADVNAVNEHGNTPLHYACFWGY 112 (448)
T ss_pred HHhcccchhhccCCCchhhhhhhcH
Confidence 9999988 8899999999998764
No 64
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.70 E-value=4.4e-16 Score=106.69 Aligned_cols=114 Identities=36% Similarity=0.424 Sum_probs=105.1
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCc-----HHHHHHHHhcCC---CCCCCCCCCC
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGH-----VEVVKLLLSKKA---NIDARDRWGS 120 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~ll~~~~---~~~~~~~~~~ 120 (163)
.+..+.++++.++..+....+++++..+.+++.++..|.|+||+|+..++ .+++++|+..|+ ..+..+..|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~ 148 (235)
T COG0666 69 RDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGN 148 (235)
T ss_pred CCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCC
Confidence 34457899999999999999999999999999999999999999999999 999999999999 6666699999
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 121 TAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 121 t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
||||+|+..|+.+++++|++.|+++. +..|.|++++|+..|+
T Consensus 149 tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~ 192 (235)
T COG0666 149 TPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGR 192 (235)
T ss_pred chhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccch
Confidence 99999999999999999999999977 6788899999998875
No 65
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.70 E-value=1.4e-17 Score=126.69 Aligned_cols=119 Identities=22% Similarity=0.198 Sum_probs=109.6
Q ss_pred CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q 031235 44 ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 123 (163)
Q Consensus 44 ~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 123 (163)
+.....++.|.|.||.|+.+|+.++++.|+++.+-++..+..|.+|||+|++.|+.+++++++..+..+|+.+..|.|||
T Consensus 40 ds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tpl 119 (854)
T KOG0507|consen 40 DSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPL 119 (854)
T ss_pred ccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCcc
Confidence 34445667899999999999999999999999888888899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|.|+++||.+++.+|+.+|++.. +..++|||+.|++.|.
T Consensus 120 hlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr 160 (854)
T KOG0507|consen 120 HLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGR 160 (854)
T ss_pred chhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhh
Confidence 99999999999999999999965 6677899999999875
No 66
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.69 E-value=3.9e-16 Score=122.36 Aligned_cols=102 Identities=37% Similarity=0.399 Sum_probs=92.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 031235 55 MQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEV 134 (163)
Q Consensus 55 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~ 134 (163)
..|+.|+..|+.+.++.|++.|++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCCCC--CCCCCceeee
Q 031235 135 YNILKAR-------GAKVP--NGILHIFFHF 156 (163)
Q Consensus 135 ~~~Ll~~-------g~~~~--~~~~~t~l~~ 156 (163)
+++|+.+ |++.. +..|.+|+..
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~ 194 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLE 194 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCCccch
Confidence 9999998 66654 4445555443
No 67
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=1.3e-16 Score=117.56 Aligned_cols=105 Identities=31% Similarity=0.333 Sum_probs=93.0
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 031235 51 LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG 130 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g 130 (163)
++....|.-|+..|.++.|+.++..-.|+...+.+|.|+||.|+..||.++|+||++.|+++|+.|.+||||||+|+..+
T Consensus 548 fnPLaLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 548 FNPLALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCN 627 (752)
T ss_pred cchHHHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcC
Confidence 33445577788899999999999888888888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCC---CCCCCceee
Q 031235 131 NVEVYNILKARGAKVP---NGILHIFFH 155 (163)
Q Consensus 131 ~~~~~~~Ll~~g~~~~---~~~~~t~l~ 155 (163)
++.+++.|++.|+.+. -.+++|+..
T Consensus 628 nv~~ckqLVe~GaavfAsTlSDmeTa~e 655 (752)
T KOG0515|consen 628 NVPMCKQLVESGAAVFASTLSDMETAAE 655 (752)
T ss_pred chHHHHHHHhccceEEeeecccccchhh
Confidence 9999999999999865 445556543
No 68
>PHA02792 ankyrin-like protein; Provisional
Probab=99.69 E-value=2e-16 Score=120.97 Aligned_cols=107 Identities=17% Similarity=0.038 Sum_probs=95.7
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC--ChHHHHHHhcCcH---HHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDG--RTALHIAACEGHV---EVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g--~t~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
....++.|+..|+.+++++|+++|++++.+|..| .||||+|+..... .++++++..|++++.++..|.||||+|+
T Consensus 339 ~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa 418 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCI 418 (631)
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHH
Confidence 5667899999999999999999999999888664 6999998776654 4578899999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC--CCCCCceeeeecc
Q 031235 128 YYGNVEVYNILKARGAKVP--NGILHIFFHFRKP 159 (163)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~ 159 (163)
..++.+++++|+++|++++ +..|.|||++|+.
T Consensus 419 ~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 419 ESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999987 7788999999864
No 69
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.69 E-value=1.8e-17 Score=95.57 Aligned_cols=95 Identities=27% Similarity=0.330 Sum_probs=82.6
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCC
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 110 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 110 (163)
+..+.++++...+ ..+.....|.+|||+|+-.|+.+++++|+..|++++.+|..|.|||.-|++.||.+|+++|++.|+
T Consensus 13 G~~DeVk~~v~~g-~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GA 91 (117)
T KOG4214|consen 13 GEIDEVKQSVNEG-LNVNEIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGA 91 (117)
T ss_pred CcHHHHHHHHHcc-ccHHHHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCc
Confidence 5566666665555 444555689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHH
Q 031235 111 NIDARDRWGSTAAADA 126 (163)
Q Consensus 111 ~~~~~~~~~~t~l~~a 126 (163)
+...+..+|.+.+..+
T Consensus 92 drt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 92 DRTIHAPDGTALIEAT 107 (117)
T ss_pred ccceeCCCchhHHhhc
Confidence 9999888888766544
No 70
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.67 E-value=9.7e-17 Score=123.09 Aligned_cols=117 Identities=26% Similarity=0.271 Sum_probs=105.0
Q ss_pred CCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-----------------------CCCChHHHHHHhcCcHHHH
Q 031235 46 TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-----------------------LDGRTALHIAACEGHVEVV 102 (163)
Q Consensus 46 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-----------------------~~g~t~l~~a~~~~~~~~~ 102 (163)
-....+.|.|+||+|+.+.+.++|+.|++.|+|++++. ..|+.||.+||..++.+|+
T Consensus 177 ~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eiv 256 (782)
T KOG3676|consen 177 YTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIV 256 (782)
T ss_pred hhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHH
Confidence 34456779999999999999999999999999987442 1378899999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCceeeeeccCCC
Q 031235 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK----VPNGILHIFFHFRKPRGH 162 (163)
Q Consensus 103 ~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~----~~~~~~~t~l~~A~~~g~ 162 (163)
++|+++|++++++|..|+|.||..+.+-..++..+++++|++ +.|..|-|||..|++.|.
T Consensus 257 rlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk 320 (782)
T KOG3676|consen 257 RLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGK 320 (782)
T ss_pred HHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhh
Confidence 999999999999999999999999999999999999999999 337888899999998774
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=99.66 E-value=3.4e-16 Score=119.75 Aligned_cols=116 Identities=20% Similarity=0.193 Sum_probs=100.9
Q ss_pred CCCCCCCchHHHHHHHH-cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHh-cCcHHHHHHHHhcCCCCC----------
Q 031235 46 TVPENLDSTMQLLFMAC-SGDVKGVEDLLNEGIDVNSIDLDGRTALHIAAC-EGHVEVVKLLLSKKANID---------- 113 (163)
Q Consensus 46 ~~~~~~~~~~~l~~a~~-~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~-~~~~~~~~~ll~~~~~~~---------- 113 (163)
....+.+|..++|+-+. .|+.+.++.|+.+|++++.++..+.+++++|+. .++.+++++|++.|++++
T Consensus 64 ~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~ 143 (631)
T PHA02792 64 VDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKII 143 (631)
T ss_pred CCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchh
Confidence 34567778889988765 799999999999999999999889999999976 599999999999998742
Q ss_pred --------------------------CCCCCCCcHHHHHHHcC-------CHHHHHHHHHcCCCCC--CCCCCceeeeec
Q 031235 114 --------------------------ARDRWGSTAAADAKYYG-------NVEVYNILKARGAKVP--NGILHIFFHFRK 158 (163)
Q Consensus 114 --------------------------~~~~~~~t~l~~a~~~g-------~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~ 158 (163)
..+..|.||||+|+..+ +.+++++|+++|+++. +..|.||||+|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~ 223 (631)
T PHA02792 144 IEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYV 223 (631)
T ss_pred hhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHH
Confidence 23456999999999999 8999999999999986 567999999999
Q ss_pred cCC
Q 031235 159 PRG 161 (163)
Q Consensus 159 ~~g 161 (163)
.+.
T Consensus 224 ~~~ 226 (631)
T PHA02792 224 DKC 226 (631)
T ss_pred Hcc
Confidence 876
No 72
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.65 E-value=1.9e-16 Score=111.97 Aligned_cols=111 Identities=34% Similarity=0.359 Sum_probs=98.5
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc-C
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-K 109 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~ 109 (163)
.+...+.++...++++..-.-.|.|+|++|+..|..++++.||..|+++|.+|..|.|+|+.|+++||.+++++|+.. +
T Consensus 318 ~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~ 397 (452)
T KOG0514|consen 318 ADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPS 397 (452)
T ss_pred hhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCc
Confidence 344445555666777777777799999999999999999999999999999999999999999999999999999976 7
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 031235 110 ANIDARDRWGSTAAADAKYYGNVEVYNILKAR 141 (163)
Q Consensus 110 ~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~ 141 (163)
++....|.+|.|+|.+|-..||-+|.-+|..+
T Consensus 398 cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 398 CDISLTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred ccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 89999999999999999999999998777665
No 73
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.63 E-value=4.6e-16 Score=84.12 Aligned_cols=55 Identities=49% Similarity=0.601 Sum_probs=31.1
Q ss_pred HHHcC-CCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 031235 72 LLNEG-IDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (163)
Q Consensus 72 ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 126 (163)
|+++| .+++.+|..|.||||+|+.+|+.+++++|++.|++++.+|..|+||+++|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 46666 77888889999999999999999999999988999999999999999886
No 74
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.62 E-value=4.7e-16 Score=92.22 Aligned_cols=64 Identities=42% Similarity=0.633 Sum_probs=58.9
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 116 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 116 (163)
|.+|||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.|++++.+|
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 7789999999999999999999999999999999999999999999999999999999998764
No 75
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.61 E-value=2.8e-15 Score=80.54 Aligned_cols=54 Identities=44% Similarity=0.612 Sum_probs=26.2
Q ss_pred CChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 031235 86 GRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILK 139 (163)
Q Consensus 86 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll 139 (163)
|.|+||+|+..|+.+++++|++.|.+++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 345555555555555555555555555555555555555555555555555543
No 76
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.61 E-value=2.5e-15 Score=80.73 Aligned_cols=54 Identities=44% Similarity=0.660 Sum_probs=46.1
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHH
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLL 106 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 106 (163)
|.|+||+|+..|+.+++++|+++|.+++.+|..|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 678999999999999999999999999999999999999999999999999986
No 77
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.61 E-value=6.3e-16 Score=117.92 Aligned_cols=120 Identities=28% Similarity=0.307 Sum_probs=105.0
Q ss_pred CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q 031235 44 ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 123 (163)
Q Consensus 44 ~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 123 (163)
......+..|.+|||+|++.|+.+.++.++..+..++....+|.||||.|+..||.+++.+|+.+++++-+.+..+.|++
T Consensus 73 a~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~l 152 (854)
T KOG0507|consen 73 ALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVL 152 (854)
T ss_pred hhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHH
Confidence 33444558899999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC----------CCCCCceeeeeccCCCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP----------NGILHIFFHFRKPRGHL 163 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~----------~~~~~t~l~~A~~~g~~ 163 (163)
..|++.|..++++.|++...... .-.+.+|+|.|+++||.
T Consensus 153 dlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~ 202 (854)
T KOG0507|consen 153 DLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHV 202 (854)
T ss_pred HHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchH
Confidence 99999999999999998722211 22334899999999984
No 78
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.57 E-value=1.1e-14 Score=107.49 Aligned_cols=107 Identities=30% Similarity=0.430 Sum_probs=99.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
...-.+..||..++++-+..++..|+.++..+..|.|+||.+|.-.+.+|+++|+++|++++..|..+|||||.|+..|+
T Consensus 39 ~~sa~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~ 118 (527)
T KOG0505|consen 39 EDSAVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGY 118 (527)
T ss_pred CchHHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhccccc
Confidence 34456888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC--CCCCCceeeeec
Q 031235 132 VEVYNILKARGAKVP--NGILHIFFHFRK 158 (163)
Q Consensus 132 ~~~~~~Ll~~g~~~~--~~~~~t~l~~A~ 158 (163)
..++++|++.|+++. |.+|..|+.++.
T Consensus 119 ~~i~~~li~~gA~~~avNsdg~~P~dl~e 147 (527)
T KOG0505|consen 119 LNIVEYLIQHGANLLAVNSDGNMPYDLAE 147 (527)
T ss_pred HHHHHHHHHhhhhhhhccCCCCCcccccc
Confidence 999999999999976 888888888764
No 79
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=1.9e-15 Score=111.52 Aligned_cols=117 Identities=26% Similarity=0.222 Sum_probs=99.5
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 104 (163)
++.+-.|.++.+++++.+-...-..+.+|.|+||-|+..||+++|++|++.|+++|..|..||||||.|+.+++..+++.
T Consensus 555 LDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckq 634 (752)
T KOG0515|consen 555 LDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQ 634 (752)
T ss_pred HhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHH
Confidence 44555677888888777777777888999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCC-CCCCcHHHHHH--HcCCHHHHHHHHHc
Q 031235 105 LLSKKANIDARD-RWGSTAAADAK--YYGNVEVYNILKAR 141 (163)
Q Consensus 105 ll~~~~~~~~~~-~~~~t~l~~a~--~~g~~~~~~~Ll~~ 141 (163)
|++.|+.+.+.. .++.|+..-+- .-|...|.+||...
T Consensus 635 LVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 635 LVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV 674 (752)
T ss_pred HHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence 999998877664 35667776553 35788898888763
No 80
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.55 E-value=2.8e-15 Score=81.05 Aligned_cols=53 Identities=30% Similarity=0.447 Sum_probs=32.7
Q ss_pred HHhcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeee
Q 031235 105 LLSKK-ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFR 157 (163)
Q Consensus 105 ll~~~-~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A 157 (163)
|++.| ++++.+|..|.||||+|+..|+.+++++|++.|++++ +..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 45666 8899999999999999999999999999999999987 88999999987
No 81
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.53 E-value=5.1e-14 Score=87.83 Aligned_cols=114 Identities=33% Similarity=0.422 Sum_probs=97.4
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
.+...++.+.+..++..+......+..|.+++|.|+..++.++++.|+..+.+++..+..+.||+|+|+..++.+++++|
T Consensus 13 ~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L 92 (126)
T cd00204 13 LAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLL 92 (126)
T ss_pred HHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHH
Confidence 33444555555555555555467777899999999999999999999999988888888999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILK 139 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll 139 (163)
+..+.+.+..+..+.||++.|...++.+++++|+
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 93 LKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999888889999999999999999999998874
No 82
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.53 E-value=4.2e-14 Score=97.60 Aligned_cols=91 Identities=32% Similarity=0.327 Sum_probs=48.0
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNS-IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 126 (163)
..+..|+++|..|+.+|+.+.++.|++.|+|+|. ++..+.||||+|+..|+.+++.+|++.|+.+...|.-|+|+-..|
T Consensus 40 ~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmA 119 (396)
T KOG1710|consen 40 QRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMA 119 (396)
T ss_pred ccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHH
Confidence 3444455555555555555555555555555443 234445555555555555555555555555555555555555555
Q ss_pred HHcCCHHHHHHH
Q 031235 127 KYYGNVEVYNIL 138 (163)
Q Consensus 127 ~~~g~~~~~~~L 138 (163)
+--|+.+||..+
T Consensus 120 AFVG~H~CV~iI 131 (396)
T KOG1710|consen 120 AFVGHHECVAII 131 (396)
T ss_pred HHhcchHHHHHH
Confidence 555555555444
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.49 E-value=2.6e-13 Score=92.91 Aligned_cols=112 Identities=28% Similarity=0.373 Sum_probs=98.4
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCC-----HHHHHHHHHcCC---CCcccCCCCChHHHHHHhcCcHHHH
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGD-----VKGVEDLLNEGI---DVNSIDLDGRTALHIAACEGHVEVV 102 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~-----~~~~~~ll~~~~---~~~~~~~~g~t~l~~a~~~~~~~~~ 102 (163)
++...+..+...+......+..|.|+||+|+..++ .++++.|++.|+ ..+.++..|.||||+|+..|+.+++
T Consensus 84 ~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~ 163 (235)
T COG0666 84 GDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIV 163 (235)
T ss_pred CcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHH
Confidence 33333334445555557888999999999999999 999999999999 5666699999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 031235 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG 142 (163)
Q Consensus 103 ~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g 142 (163)
++++..|++++..+..|.|++++|+..++.++++.++..+
T Consensus 164 ~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 164 ELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999976
No 84
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.47 E-value=5.2e-14 Score=97.19 Aligned_cols=111 Identities=26% Similarity=0.259 Sum_probs=100.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCC-CCCCCcHHHHHHHcC
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR-DRWGSTAAADAKYYG 130 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~t~l~~a~~~g 130 (163)
....+|..+..+++.+....||..--+++.+|..|-++|..|+..|+.+++++|++.|+++|.. +..+.|||+.|+..|
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 3456899999999999999999875568899999999999999999999999999999999876 678899999999999
Q ss_pred CHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 131 NVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 131 ~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+.++.++|++.|+... |+-|.|+...|++-||
T Consensus 91 n~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~ 124 (396)
T KOG1710|consen 91 NQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGH 124 (396)
T ss_pred CchHHHHHHhccCccccccchhhhHHHHHHHhcc
Confidence 9999999999999965 8888999999988765
No 85
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.32 E-value=4.7e-13 Score=106.52 Aligned_cols=136 Identities=22% Similarity=0.251 Sum_probs=103.7
Q ss_pred eeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCChHHHHHHhcCcHHHHHHH
Q 031235 27 FGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSI-DLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
.++-+..+.+..++..+....-.+..|.+||..|+-.||...|..|+.+.+++..+ |+.+.|+|.+||..|+.+++++|
T Consensus 764 acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelL 843 (2131)
T KOG4369|consen 764 ACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELL 843 (2131)
T ss_pred cccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHH
Confidence 33345555555555555666667777888888888888888888888888777754 56778888888888888888888
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC----CCCceeeeeccCCC
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPNG----ILHIFFHFRKPRGH 162 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~~~----~~~t~l~~A~~~g~ 162 (163)
+..|++...++....|||.+|...|.+++++.|+..|++++.. .|-.||..|..+||
T Consensus 844 l~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh 904 (2131)
T KOG4369|consen 844 LNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGH 904 (2131)
T ss_pred HHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccc
Confidence 8888888777778888888888888888888888888887733 33378888877776
No 86
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.32 E-value=2.5e-12 Score=101.21 Aligned_cols=101 Identities=25% Similarity=0.257 Sum_probs=85.3
Q ss_pred eeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHH
Q 031235 27 FGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLL 106 (163)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 106 (163)
++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+
T Consensus 89 aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll 168 (664)
T PTZ00322 89 LAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168 (664)
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHH
Confidence 34456666666666666666677888999999999999999999999999999999999999999999999999999999
Q ss_pred hc-------CCCCCCCCCCCCcHHHHHH
Q 031235 107 SK-------KANIDARDRWGSTAAADAK 127 (163)
Q Consensus 107 ~~-------~~~~~~~~~~~~t~l~~a~ 127 (163)
.+ +++.+..+..|.+|+..+.
T Consensus 169 ~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 169 RHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred hCCCcccccCCCCCccccCCCCccchhh
Confidence 88 7888777777777665443
No 87
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.30 E-value=4.6e-12 Score=92.77 Aligned_cols=94 Identities=40% Similarity=0.686 Sum_probs=86.9
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHH
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKY 128 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~a~~ 128 (163)
+.++...+++|+..|+++.++.+.-.|.++..+|...+|+||.|+..|++.++++|++. +.+++.+|++|+|||.-|..
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence 34466789999999999999999999999999999999999999999999999999975 89999999999999999999
Q ss_pred cCCHHHHHHHHHcCC
Q 031235 129 YGNVEVYNILKARGA 143 (163)
Q Consensus 129 ~g~~~~~~~Ll~~g~ 143 (163)
.+|.+++++|.+..-
T Consensus 583 F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 583 FKHKEVVKLLEEAQY 597 (622)
T ss_pred cCcHHHHHHHHHHhc
Confidence 999999999988754
No 88
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.29 E-value=1.8e-11 Score=94.73 Aligned_cols=93 Identities=29% Similarity=0.317 Sum_probs=88.4
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCC--CCCCCCCCCcHHHHHH
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN--IDARDRWGSTAAADAK 127 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~~t~l~~a~ 127 (163)
-+-|..||-.||..++.++++.|+++|+|++.+|..|.|.||..+..-..++.++++..|++ ....|.+|-|||..|+
T Consensus 237 ~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAa 316 (782)
T KOG3676|consen 237 FYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAA 316 (782)
T ss_pred eeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHH
Confidence 35588999999999999999999999999999999999999999999999999999999999 8888999999999999
Q ss_pred HcCCHHHHHHHHHcC
Q 031235 128 YYGNVEVYNILKARG 142 (163)
Q Consensus 128 ~~g~~~~~~~Ll~~g 142 (163)
..|..++.+.+++..
T Consensus 317 klGk~emf~~ile~~ 331 (782)
T KOG3676|consen 317 KLGKKEMFQHILERR 331 (782)
T ss_pred HhhhHHHHHHHHHhh
Confidence 999999999999983
No 89
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.23 E-value=2.7e-12 Score=102.35 Aligned_cols=112 Identities=27% Similarity=0.284 Sum_probs=102.6
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCC-CCCCCcHHHHHHHc
Q 031235 51 LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR-DRWGSTAAADAKYY 129 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~t~l~~a~~~ 129 (163)
..-.|+|-.||.+|+.+.++.|+..|+++..+|..|.+||..|+..||..+|+.|+...+++++. |+.+.|+|.+|+..
T Consensus 755 ~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsg 834 (2131)
T KOG4369|consen 755 PNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSG 834 (2131)
T ss_pred ccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCC
Confidence 34568899999999999999999999999999999999999999999999999999999999887 78899999999999
Q ss_pred CCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 130 GNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 130 g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|+++++++|+..|++-. +...+|||..|..-|+
T Consensus 835 gr~~vvelLl~~gankehrnvsDytPlsla~Sggy 869 (2131)
T KOG4369|consen 835 GRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGY 869 (2131)
T ss_pred CcchHHHHHHHhhccccccchhhcCchhhhcCcch
Confidence 99999999999999866 5566799999887665
No 90
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.17 E-value=2.8e-10 Score=84.03 Aligned_cols=86 Identities=29% Similarity=0.296 Sum_probs=79.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 031235 55 MQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVE 133 (163)
Q Consensus 55 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~ 133 (163)
..||..++.|+.++.-.||.-|++.|..+ ..|.||||.|+..|+..-+++|.-+|+++.+.|..|.||+.+|...||.+
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence 35999999999999999999999998877 56999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 031235 134 VYNILKA 140 (163)
Q Consensus 134 ~~~~Ll~ 140 (163)
+.+-|++
T Consensus 215 laeRl~e 221 (669)
T KOG0818|consen 215 LAERLVE 221 (669)
T ss_pred HHHHHHH
Confidence 8877666
No 91
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.11 E-value=6.7e-11 Score=88.79 Aligned_cols=101 Identities=27% Similarity=0.361 Sum_probs=89.7
Q ss_pred CcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCC
Q 031235 42 QDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGID--VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWG 119 (163)
Q Consensus 42 ~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 119 (163)
.+........+..+.||+|+..|+-++|+++|.+|.. ++..+..|.|+||.|+..++..++.+|++.|+.+...|..|
T Consensus 888 ~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg 967 (1004)
T KOG0782|consen 888 NGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKG 967 (1004)
T ss_pred cCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCC
Confidence 3444555667788999999999999999999999864 66778899999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcC
Q 031235 120 STAAADAKYYGNVEVYNILKARG 142 (163)
Q Consensus 120 ~t~l~~a~~~g~~~~~~~Ll~~g 142 (163)
.||-..|-+.|+.++..||-++.
T Consensus 968 ~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 968 KTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred CChHHHHHhcCCchHHHHHhhhh
Confidence 99999999999999999998774
No 92
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.07 E-value=8.7e-11 Score=91.45 Aligned_cols=85 Identities=27% Similarity=0.265 Sum_probs=78.4
Q ss_pred CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcH
Q 031235 44 ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTA 122 (163)
Q Consensus 44 ~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~ 122 (163)
...+.++.-|.++||.++..+..+++++|+.+|.++..+| ..|+||||.|..+|+.+|+-+|+.+|....++|+.|.+|
T Consensus 43 n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsp 122 (1267)
T KOG0783|consen 43 NLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSP 122 (1267)
T ss_pred hhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCH
Confidence 3456677889999999999999999999999999999998 569999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 031235 123 AADAKY 128 (163)
Q Consensus 123 l~~a~~ 128 (163)
|..-++
T Consensus 123 lq~~~r 128 (1267)
T KOG0783|consen 123 LQFLSR 128 (1267)
T ss_pred HHHHhh
Confidence 998776
No 93
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.02 E-value=1.3e-09 Score=81.03 Aligned_cols=87 Identities=26% Similarity=0.374 Sum_probs=74.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCH
Q 031235 55 MQLLFMACSGDVKGVEDLLNE--GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNV 132 (163)
Q Consensus 55 ~~l~~a~~~g~~~~~~~ll~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~ 132 (163)
.|+|+++.....+-+...+.. ...++..|..|.||||.|+..|+..+++.|+..|+++..+|..|++|||.|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 468999888777776665432 456888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc
Q 031235 133 EVYNILKAR 141 (163)
Q Consensus 133 ~~~~~Ll~~ 141 (163)
+++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 887666653
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=99.01 E-value=7.4e-10 Score=51.64 Aligned_cols=28 Identities=36% Similarity=0.438 Sum_probs=21.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 119 GSTAAADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 119 ~~t~l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
|+||||+|+..|+.+++++|+++|++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 6777777777777777777777777664
No 95
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.93 E-value=2.4e-09 Score=51.20 Aligned_cols=27 Identities=52% Similarity=0.751 Sum_probs=10.9
Q ss_pred ChHHHHHHhcCcHHHHHHHHhcCCCCC
Q 031235 87 RTALHIAACEGHVEVVKLLLSKKANID 113 (163)
Q Consensus 87 ~t~l~~a~~~~~~~~~~~ll~~~~~~~ 113 (163)
.||||+|+..++.+++++|++.|++++
T Consensus 3 ~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 29 (33)
T PF00023_consen 3 NTPLHYAAQRGHPDIVKLLLKHGADIN 29 (33)
T ss_dssp BBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 344444444444444444444444333
No 96
>PF13606 Ank_3: Ankyrin repeat
Probab=98.93 E-value=2e-09 Score=50.13 Aligned_cols=28 Identities=46% Similarity=0.834 Sum_probs=15.1
Q ss_pred CChHHHHHHhcCcHHHHHHHHhcCCCCC
Q 031235 86 GRTALHIAACEGHVEVVKLLLSKKANID 113 (163)
Q Consensus 86 g~t~l~~a~~~~~~~~~~~ll~~~~~~~ 113 (163)
|+||||+|+..|+.+++++|++.|++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 4455555555555555555555555543
No 97
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.91 E-value=7.7e-09 Score=77.85 Aligned_cols=91 Identities=36% Similarity=0.413 Sum_probs=79.7
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC--Ccc--cCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 56 QLLFMACSGDVKGVEDLLNEGID--VNS--IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 56 ~l~~a~~~g~~~~~~~ll~~~~~--~~~--~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
.|..|..-.+...+-.||.+|.. ++. -+..|.|+||.||..|++.+..+|+=+|+++.++|..|.|+|.||.+.|.
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s 706 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS 706 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence 46677778888889999998854 332 24567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC
Q 031235 132 VEVYNILKARGAKVP 146 (163)
Q Consensus 132 ~~~~~~Ll~~g~~~~ 146 (163)
-+|+..|+++|+.-+
T Consensus 707 qec~d~llq~gcp~e 721 (749)
T KOG0705|consen 707 QECIDVLLQYGCPDE 721 (749)
T ss_pred HHHHHHHHHcCCCcc
Confidence 999999999998754
No 98
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.88 E-value=4.7e-10 Score=87.52 Aligned_cols=81 Identities=31% Similarity=0.402 Sum_probs=73.4
Q ss_pred CcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceee
Q 031235 79 VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDR-WGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFH 155 (163)
Q Consensus 79 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~ 155 (163)
.+.+|..|+++||.++..+...++++|++.|+++..+|. .|+||||.|..+|+.+|+-.|+.+|+.+. +.+|..||+
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 567889999999999999999999999999999999976 69999999999999999999999999865 888888887
Q ss_pred eecc
Q 031235 156 FRKP 159 (163)
Q Consensus 156 ~A~~ 159 (163)
.-++
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 6544
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.86 E-value=5.2e-09 Score=50.00 Aligned_cols=32 Identities=34% Similarity=0.448 Sum_probs=29.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccC
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSID 83 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~ 83 (163)
+|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 48899999999999999999999999998876
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.79 E-value=1.1e-09 Score=80.60 Aligned_cols=87 Identities=31% Similarity=0.300 Sum_probs=79.1
Q ss_pred eeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHhcCcHHHH
Q 031235 24 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVV 102 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~ 102 (163)
.+.+++.+++..++++..++......+++..|+||.|+..|+.+++++|++. +.+++.+|++|+|||.-|..++|.+++
T Consensus 510 ~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~ 589 (622)
T KOG0506|consen 510 VMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVV 589 (622)
T ss_pred hhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHH
Confidence 3455667999999999999999999999999999999999999999999985 678999999999999999999999999
Q ss_pred HHHHhcCC
Q 031235 103 KLLLSKKA 110 (163)
Q Consensus 103 ~~ll~~~~ 110 (163)
++|-+.-.
T Consensus 590 k~L~~~~~ 597 (622)
T KOG0506|consen 590 KLLEEAQY 597 (622)
T ss_pred HHHHHHhc
Confidence 99987643
No 101
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.75 E-value=1.9e-08 Score=75.97 Aligned_cols=106 Identities=25% Similarity=0.232 Sum_probs=89.5
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHcCCHHH
Q 031235 57 LLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN--IDARDRWGSTAAADAKYYGNVEV 134 (163)
Q Consensus 57 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~~t~l~~a~~~g~~~~ 134 (163)
+..|+..+++--+......|.++..++....+.||+|+..|+-++++|+++.|-. +.+.+..|.|+||-|+..++-.+
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 6677777887666666777888888888889999999999999999999998753 56667899999999999999999
Q ss_pred HHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 135 YNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 135 ~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.++|++.|+++. +..|.||-..|-+-|+
T Consensus 950 c~~lvdagasl~ktd~kg~tp~eraqqa~d 979 (1004)
T KOG0782|consen 950 CQLLVDAGASLRKTDSKGKTPQERAQQAGD 979 (1004)
T ss_pred HHHHHhcchhheecccCCCChHHHHHhcCC
Confidence 999999999987 6677888776655543
No 102
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.72 E-value=6.4e-08 Score=69.80 Aligned_cols=70 Identities=31% Similarity=0.350 Sum_probs=61.7
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q 031235 54 TMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 123 (163)
Q Consensus 54 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 123 (163)
..-|..||+.|+.+.++.|++.|.++|.+|....+||.+|+..||.+++++|+++|+-..--..+|...+
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~ 106 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH 106 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence 4459999999999999999999999999999999999999999999999999999987655455565443
No 103
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.56 E-value=1.4e-07 Score=70.21 Aligned_cols=74 Identities=23% Similarity=0.216 Sum_probs=67.1
Q ss_pred HHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 89 ALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 89 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
-||-++..++.+.+--|+..|+++|..+ ..|.||||.|++.|+..=+++|+-+||++. +..|.||+.+|-..||
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCc
Confidence 4888899999998888889999999885 479999999999999999999999999987 8889999999988876
No 104
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.54 E-value=1e-07 Score=76.03 Aligned_cols=96 Identities=24% Similarity=0.247 Sum_probs=53.8
Q ss_pred cCCHHHHHHHHHcCCCCcc--cCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 031235 63 SGDVKGVEDLLNEGIDVNS--IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKA 140 (163)
Q Consensus 63 ~g~~~~~~~ll~~~~~~~~--~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~ 140 (163)
....+++..-+..++..+. +-..|.++||.|+..+...++++|+++|++++..+..|.+|+|.+...|++..+..|+.
T Consensus 631 ~~~~~~~~~~~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~ 710 (785)
T KOG0521|consen 631 GECLPRIATALAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLK 710 (785)
T ss_pred ccchhhhhhhhcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcc
Confidence 3344444444444444332 22445566666666666666666666666666666666666666666666666666666
Q ss_pred cCCCCC--CCCCCceeeeec
Q 031235 141 RGAKVP--NGILHIFFHFRK 158 (163)
Q Consensus 141 ~g~~~~--~~~~~t~l~~A~ 158 (163)
+|++.. +.++.+|+++|.
T Consensus 711 ~~a~~~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 711 RGADPNAFDPDGKLPLDIAM 730 (785)
T ss_pred ccccccccCccCcchhhHHh
Confidence 666544 555556665553
No 105
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.54 E-value=7.8e-08 Score=71.87 Aligned_cols=75 Identities=29% Similarity=0.249 Sum_probs=63.2
Q ss_pred hHHHHHHhcCcHHHHHHHH--hcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 88 TALHIAACEGHVEVVKLLL--SKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 88 t~l~~a~~~~~~~~~~~ll--~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|+|+++.....+-.+..+ +....+...|..|.||||.|+..|+.+.++.|+..|+++. |.+|++|||-|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCC
Confidence 4599999988776554433 3355677889999999999999999999999999999855 9999999999999885
No 106
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.51 E-value=9.2e-08 Score=76.23 Aligned_cols=88 Identities=34% Similarity=0.410 Sum_probs=80.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
.|.++||.|+..++.-.++.|+.+|++++..+..|.+|+|.+...|+......++..|++.++.+..|.+|+++|....+
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhcc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999987766
Q ss_pred HHHHHHHH
Q 031235 132 VEVYNILK 139 (163)
Q Consensus 132 ~~~~~~Ll 139 (163)
.+++-++.
T Consensus 735 ~d~~~l~~ 742 (785)
T KOG0521|consen 735 ADIVLLLR 742 (785)
T ss_pred ccHHHHHh
Confidence 66654443
No 107
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.49 E-value=1.2e-07 Score=75.79 Aligned_cols=116 Identities=22% Similarity=0.174 Sum_probs=86.1
Q ss_pred CCCCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 031235 47 VPENLDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 125 (163)
Q Consensus 47 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 125 (163)
-.....|++.+|.++..+..-.++.+++- +......|..|.-.+|+++..+..-.+....-.|..++++|..|+|||||
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~w 647 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHW 647 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccch
Confidence 34556799999999999999888888884 54444556677777888555554333333334578899999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCC--------CCCCCceeeeeccCCC
Q 031235 126 AKYYGNVEVYNILKARGAKVP--------NGILHIFFHFRKPRGH 162 (163)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~--------~~~~~t~l~~A~~~g~ 162 (163)
|+.+|+..++..|.+.|++.. .-.|-|+..+|-.+||
T Consensus 648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~ 692 (975)
T KOG0520|consen 648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGH 692 (975)
T ss_pred HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccc
Confidence 999999999999998887633 2235577777666654
No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.49 E-value=4.1e-07 Score=65.74 Aligned_cols=60 Identities=28% Similarity=0.356 Sum_probs=56.7
Q ss_pred ChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 87 RTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 87 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
.--|..||+.|..+.+++|++.|.++|..|+...+||.+|+.-||..++++|+++||-..
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~ 96 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS 96 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc
Confidence 345889999999999999999999999999999999999999999999999999999876
No 109
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.48 E-value=4.1e-07 Score=68.85 Aligned_cols=67 Identities=30% Similarity=0.296 Sum_probs=61.4
Q ss_pred CCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCC
Q 031235 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANID 113 (163)
Q Consensus 47 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~ 113 (163)
...+.+|.|+||.||..|+....+.|+=+|+++..+|..|.|+|.||...|..+|+..|+++|+..+
T Consensus 655 t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 655 TCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred cccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 3455678999999999999999999999999999999999999999999999999999999998654
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.38 E-value=1.9e-06 Score=56.81 Aligned_cols=61 Identities=23% Similarity=0.209 Sum_probs=37.5
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCChHHHHHHhcCcHHHHHHHHhc
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLNEG-IDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 108 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 108 (163)
..+.-|||+++.|+..|+.+.+.+|+.+| +.+...|..+.+++-+|-..|+.++++.|.++
T Consensus 7 ~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 7 ARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred chhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 34445666666666666666666666666 55666666666666666666666666655554
No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.10 E-value=4.6e-07 Score=72.61 Aligned_cols=128 Identities=20% Similarity=0.124 Sum_probs=87.6
Q ss_pred hccCCCCCCceeeeeecc-CCCCcCCCCCCC-cCCCCCCCCCchHHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCChH
Q 031235 13 QSSFDPRRNNMRFSFGRQ-SSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACSGDVKGVEDLL-NEGIDVNSIDLDGRTA 89 (163)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll-~~~~~~~~~~~~g~t~ 89 (163)
..++..-+....+++.+. ...-.+.+++.- +......+.++...+|. |..+++++.-+++ -.|..++.+|..|+||
T Consensus 566 ~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tp 644 (975)
T KOG0520|consen 566 LSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTP 644 (975)
T ss_pred ccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcc
Confidence 333443444333333333 322223333332 45555666677777888 4466666655544 4788899999999999
Q ss_pred HHHHHhcCcHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 031235 90 LHIAACEGHVEVVKLLLSKKANID------ARDRWGSTAAADAKYYGNVEVYNILKAR 141 (163)
Q Consensus 90 l~~a~~~~~~~~~~~ll~~~~~~~------~~~~~~~t~l~~a~~~g~~~~~~~Ll~~ 141 (163)
||||+.+|+..++..|+..|++.. .....|.|+-..|...|+..+..+|-+.
T Consensus 645 L~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 645 LHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred cchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 999999999999999998776543 3345688999999999999998887765
No 112
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.06 E-value=2.2e-05 Score=62.13 Aligned_cols=93 Identities=23% Similarity=0.184 Sum_probs=62.7
Q ss_pred CCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCC----------CCCC
Q 031235 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANI----------DARD 116 (163)
Q Consensus 47 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~----------~~~~ 116 (163)
+..+.-|.++|+.|..+.+.+++++|++++... -.+|.+|...+..++++.++...... ...-
T Consensus 56 nc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~f 128 (822)
T KOG3609|consen 56 NCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHF 128 (822)
T ss_pred hccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccC
Confidence 334455666666666666666666666655433 13666666666677777666542211 1122
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 117 RWGSTAAADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 117 ~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
.-+.||+..|+..++.||++.|+.+|+.+.
T Consensus 129 t~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 129 TPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred CCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 357899999999999999999999999976
No 113
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.00 E-value=3.2e-05 Score=51.12 Aligned_cols=69 Identities=30% Similarity=0.231 Sum_probs=63.7
Q ss_pred CCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 031235 76 GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK-ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 144 (163)
Q Consensus 76 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~ 144 (163)
+.++|..|..|+|+++.|+..|..+.+.||+..| +.+...+..+.+.+.+|-..|..+.++.|.+.-.+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4578899999999999999999999999999999 88999999999999999999999999999987443
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.67 E-value=0.00013 Score=54.90 Aligned_cols=62 Identities=26% Similarity=0.247 Sum_probs=50.8
Q ss_pred HHHHHHHHHcCCCCcc------cCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 66 VKGVEDLLNEGIDVNS------IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 66 ~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
...+++|.+++.+.|. .+.-..|+||+|+..|...|+.+||..|+++.++|..|.||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 5567777777655432 2344668999999999999999999999999999999999998887
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.48 E-value=0.00035 Score=30.88 Aligned_cols=27 Identities=37% Similarity=0.491 Sum_probs=17.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 031235 119 GSTAAADAKYYGNVEVYNILKARGAKV 145 (163)
Q Consensus 119 ~~t~l~~a~~~g~~~~~~~Ll~~g~~~ 145 (163)
+.||+++++..++.++++.|++.+.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666666543
No 116
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.48 E-value=0.00016 Score=57.49 Aligned_cols=104 Identities=24% Similarity=0.217 Sum_probs=83.2
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcC----CCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEG----IDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 128 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~----~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 128 (163)
+.-....|+.+|+...|+..++.. -+++..|.-|+++|+.|....+.+++++|++.+... ..+|-+|+.
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~ 97 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIA 97 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHH
Confidence 444577889999999999998753 357788899999999999999999999999886544 238999999
Q ss_pred cCCHHHHHHHHHcCCCCC------------CCCCCceeeeeccCCCC
Q 031235 129 YGNVEVYNILKARGAKVP------------NGILHIFFHFRKPRGHL 163 (163)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~------------~~~~~t~l~~A~~~g~~ 163 (163)
.|..++|+.++.+...-. -..+-||+-.||.++++
T Consensus 98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nny 144 (822)
T KOG3609|consen 98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNF 144 (822)
T ss_pred HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcch
Confidence 999999999999854421 11223899999987764
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.32 E-value=0.00067 Score=29.88 Aligned_cols=25 Identities=68% Similarity=0.930 Sum_probs=13.7
Q ss_pred CChHHHHHHhcCcHHHHHHHHhcCC
Q 031235 86 GRTALHIAACEGHVEVVKLLLSKKA 110 (163)
Q Consensus 86 g~t~l~~a~~~~~~~~~~~ll~~~~ 110 (163)
|.+++|+++..++.++++.+++.+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3455555555555555555555544
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.20 E-value=0.00091 Score=50.52 Aligned_cols=60 Identities=13% Similarity=0.072 Sum_probs=48.9
Q ss_pred HHHHHHHHhcCCCCCCC------CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeec
Q 031235 99 VEVVKLLLSKKANIDAR------DRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRK 158 (163)
Q Consensus 99 ~~~~~~ll~~~~~~~~~------~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~ 158 (163)
...+++|...+...|.. +.--.|+||+|+.+|..+++.+||+.|+++. +..|.||+.++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 56788888887665432 2334689999999999999999999999976 888999998876
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.65 E-value=0.019 Score=39.47 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=65.4
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcC----CCCcccCCCCChHHHHHH--hcCcHHHHHHHHhcC-CCCCCC---CCCCCcH
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEG----IDVNSIDLDGRTALHIAA--CEGHVEVVKLLLSKK-ANIDAR---DRWGSTA 122 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~----~~~~~~~~~g~t~l~~a~--~~~~~~~~~~ll~~~-~~~~~~---~~~~~t~ 122 (163)
-.+++.++...+-.+++.+|+.+- .++- ....+.--+-|+. ......++++++..| +++|.. .+.|.|.
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f~ft~~dv~-~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtM 257 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVA-SMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTM 257 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhcceecchhh-hcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchH
Confidence 446677777777788888888652 1211 1122222344433 334678899999998 566654 5689999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 123 AADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 123 l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
|.-|..+++.+++.+|+.+||-..
T Consensus 258 LDNA~Ky~~~emi~~Llk~GA~~~ 281 (284)
T PF06128_consen 258 LDNAMKYKNSEMIAFLLKYGAISG 281 (284)
T ss_pred HHhHHhcCcHHHHHHHHHcCcccc
Confidence 999999999999999999998554
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.60 E-value=0.25 Score=33.00 Aligned_cols=82 Identities=17% Similarity=0.116 Sum_probs=50.9
Q ss_pred chHHHHHHHHcCCHHHHH----HHHHcCCCCcccCCC--CChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 031235 53 STMQLLFMACSGDVKGVE----DLLNEGIDVNSIDLD--GRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~----~ll~~~~~~~~~~~~--g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 126 (163)
-.+.+-.|....+++... .+++........|.. =..-|.+|+..|-.+.+--.+++|.+++. ++|..|
T Consensus 104 ~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~A 177 (192)
T PF03158_consen 104 PEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQA 177 (192)
T ss_pred chhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHH
Confidence 344566777777776642 334433222111111 01246778888888887777788776653 588888
Q ss_pred HHcCCHHHHHHHHH
Q 031235 127 KYYGNVEVYNILKA 140 (163)
Q Consensus 127 ~~~g~~~~~~~Ll~ 140 (163)
+.+++-.++.+++.
T Consensus 178 v~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 178 VKYNHRKILDYFIR 191 (192)
T ss_pred HHhhHHHHHHHhhc
Confidence 88888888887764
No 121
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=93.49 E-value=0.28 Score=27.76 Aligned_cols=47 Identities=15% Similarity=0.213 Sum_probs=34.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc
Q 031235 55 MQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 108 (163)
Q Consensus 55 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 108 (163)
..+..|+.+|+.++++.+++.+ .++ ...+..|+...+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 3467888888888888887654 211 2568888888888888888765
No 122
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.89 E-value=0.31 Score=27.59 Aligned_cols=47 Identities=23% Similarity=0.248 Sum_probs=39.5
Q ss_pred hHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 031235 88 TALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKAR 141 (163)
Q Consensus 88 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~ 141 (163)
..+..|..+|+.++++.+++.+. +. ...+..|+...+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~-~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNK-PD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhc-cH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 57899999999999999987542 21 3479999999999999999987
No 123
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=92.18 E-value=0.53 Score=32.67 Aligned_cols=49 Identities=33% Similarity=0.323 Sum_probs=40.6
Q ss_pred cCCHHHHHHHHHcC-CCCcc---cCCCCChHHHHHHhcCcHHHHHHHHhcCCC
Q 031235 63 SGDVKGVEDLLNEG-IDVNS---IDLDGRTALHIAACEGHVEVVKLLLSKKAN 111 (163)
Q Consensus 63 ~g~~~~~~~ll~~~-~~~~~---~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 111 (163)
..+..++++.++.| ++++. +-.+|.|.|..|..+++.+++.+|+.+|+.
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 45667788888887 46654 347899999999999999999999999983
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=76.96 E-value=7.9 Score=26.10 Aligned_cols=103 Identities=13% Similarity=0.030 Sum_probs=62.8
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHH----HHHHhcCCCCCCCCCC--CCcHHH
Q 031235 51 LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV----KLLLSKKANIDARDRW--GSTAAA 124 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~----~~ll~~~~~~~~~~~~--~~t~l~ 124 (163)
...++.+-.||.....++|+|+-.. .... +-.+-+..|....+..+. .++.++..+-.-.|.. -..-|.
T Consensus 74 ~~~q~LFElAC~~qkydiV~WI~qn---L~i~--~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~ 148 (192)
T PF03158_consen 74 YLNQELFELACEEQKYDIVKWIGQN---LHIY--NPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLE 148 (192)
T ss_pred hHHHHHHHHHHHHccccHHHHHhhc---cCCC--CchhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHHH
Confidence 4566778889999999999998432 2222 223556777776665542 2334443222111110 012467
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCceeeeeccCCC
Q 031235 125 DAKYYGNVEVYNILKARGAKVPNGILHIFFHFRKPRGH 162 (163)
Q Consensus 125 ~a~~~g~~~~~~~Ll~~g~~~~~~~~~t~l~~A~~~g~ 162 (163)
+|+..|...-+--.+.+|.+++. +.|..|+.++|
T Consensus 149 ~a~~kgll~F~letlkygg~~~~----~vls~Av~ynh 182 (192)
T PF03158_consen 149 KAAAKGLLPFVLETLKYGGNVDI----IVLSQAVKYNH 182 (192)
T ss_pred HHHHCCCHHHHHHHHHcCCcccH----HHHHHHHHhhH
Confidence 89999999988788888888763 66666666543
No 125
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=65.46 E-value=7.5 Score=27.11 Aligned_cols=37 Identities=19% Similarity=0.216 Sum_probs=18.8
Q ss_pred HcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCC
Q 031235 74 NEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 110 (163)
Q Consensus 74 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 110 (163)
+.|+.-|.-|....|+=.+|.+.++....+.|++.|+
T Consensus 3 e~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv 39 (271)
T KOG1709|consen 3 EYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGV 39 (271)
T ss_pred ccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCC
Confidence 3444444444445555555555555555555555544
No 126
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=38.72 E-value=7.1 Score=31.15 Aligned_cols=52 Identities=31% Similarity=0.346 Sum_probs=38.2
Q ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCC
Q 031235 60 MACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 111 (163)
Q Consensus 60 a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 111 (163)
++..+....+-.+++.+...+..|..+.+|+|+++..|...+...++.+..+
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~ 454 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVA 454 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhh
Confidence 4445555556666677777888888899999999999988888777765433
No 127
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=32.33 E-value=50 Score=23.27 Aligned_cols=30 Identities=7% Similarity=0.035 Sum_probs=21.9
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCC
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGID 78 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~ 78 (163)
.+....|+=..|...++....+.|++.|+.
T Consensus 11 id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 11 IDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 344556666777778888888888887754
No 128
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=28.63 E-value=7.2 Score=30.58 Aligned_cols=89 Identities=19% Similarity=0.035 Sum_probs=58.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCChHHHHHHh---cCcHHHHHHHHhcCCCCCCCCCCCCcH---HH
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEG-IDVNSIDLDGRTALHIAAC---EGHVEVVKLLLSKKANIDARDRWGSTA---AA 124 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~t~---l~ 124 (163)
+..|++.+|+..|.++.+..++-.+ .+++-....|.. |.++. .+..+.+..|..+++..+..|..|..+ +|
T Consensus 57 ~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~~~~~v~~ 134 (528)
T KOG1595|consen 57 NQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTERTYHLRYYKTLPCVTDARGNCVKNVLH 134 (528)
T ss_pred ccccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcceeEeccccccccCccccCCCcccCccc
Confidence 4668999999999999999988654 445544445555 33333 345666777777788777777666544 55
Q ss_pred HHHHcC---CHHHHHHHHHcC
Q 031235 125 DAKYYG---NVEVYNILKARG 142 (163)
Q Consensus 125 ~a~~~g---~~~~~~~Ll~~g 142 (163)
.|..++ .-..++.|++.+
T Consensus 135 ~~~~~~~~~~r~~~~~l~e~~ 155 (528)
T KOG1595|consen 135 CAFAHGPNDLRPPVEDLLELQ 155 (528)
T ss_pred ccccCCccccccHHHHHHhcc
Confidence 555544 344566777765
No 129
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=25.12 E-value=15 Score=28.95 Aligned_cols=65 Identities=14% Similarity=0.035 Sum_probs=45.6
Q ss_pred CCChHHHHHHhcCcHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHH---cCCHHHHHHHHHcCCCCC--CCCCC
Q 031235 85 DGRTALHIAACEGHVEVVKLLLSKK-ANIDARDRWGSTAAADAKY---YGNVEVYNILKARGAKVP--NGILH 151 (163)
Q Consensus 85 ~g~t~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~t~l~~a~~---~g~~~~~~~Ll~~g~~~~--~~~~~ 151 (163)
+.+|+++.|+..|.++.+.+++.-+ .+++-.-.+|.. |.++. .|..+.+..|..+++..+ +..|+
T Consensus 57 ~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~ 127 (528)
T KOG1595|consen 57 NQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTERTYHLRYYKTLPCVTDARGN 127 (528)
T ss_pred ccccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcceeEeccccccccCccccCCC
Confidence 4568999999999999999888665 445544455555 44444 456777778888877765 55565
No 130
>PF08898 DUF1843: Domain of unknown function (DUF1843); InterPro: IPR014994 This domain is found in functionally uncharacterised proteins. It can be found independently or at the C terminus of the protein.
Probab=22.90 E-value=1.3e+02 Score=15.77 Aligned_cols=20 Identities=20% Similarity=0.302 Sum_probs=17.2
Q ss_pred HHHHHHHcCCHHHHHHHHHc
Q 031235 56 QLLFMACSGDVKGVEDLLNE 75 (163)
Q Consensus 56 ~l~~a~~~g~~~~~~~ll~~ 75 (163)
+++.|...|++..+|.|...
T Consensus 6 aiq~AiasGDLa~MK~l~~~ 25 (53)
T PF08898_consen 6 AIQQAIASGDLAQMKALAAQ 25 (53)
T ss_pred HHHHHHHcCcHHHHHHHHHH
Confidence 68899999999999998754
No 131
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=22.14 E-value=1.4e+02 Score=16.32 Aligned_cols=20 Identities=25% Similarity=0.488 Sum_probs=14.7
Q ss_pred HHHHHHHcCCHHHHHHHHHc
Q 031235 56 QLLFMACSGDVKGVEDLLNE 75 (163)
Q Consensus 56 ~l~~a~~~g~~~~~~~ll~~ 75 (163)
++..+|..|+.+.+..++.+
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~ 21 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKH 21 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 35566778888888888765
Done!