Query 031235
Match_columns 163
No_of_seqs 138 out of 1569
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 17:52:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031235.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031235hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 4.4E-32 1.5E-36 178.6 7.7 139 24-162 8-148 (169)
2 4b93_B Ankyrin repeat domain-c 100.0 1.2E-28 4E-33 173.3 8.7 114 49-162 115-230 (269)
3 2jab_A H10-2-G3; HER2, darpin, 100.0 1.3E-27 4.6E-32 151.8 11.2 116 47-162 8-125 (136)
4 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.1E-28 3.7E-33 162.2 6.3 140 23-162 17-158 (169)
5 3v30_A DNA-binding protein rfx 99.9 2.4E-28 8.2E-33 160.8 7.7 137 26-162 8-147 (172)
6 4gpm_A Engineered protein OR26 99.9 2E-27 6.8E-32 156.3 12.0 108 55-162 6-115 (169)
7 3twr_A Tankyrase-2; ankyrin re 99.9 3.1E-28 1.1E-32 159.2 8.1 137 25-162 13-152 (165)
8 1awc_B Protein (GA binding pro 99.9 2.2E-28 7.5E-33 158.2 7.1 114 49-162 30-145 (153)
9 3v31_A Ankyrin repeat family A 99.9 1.6E-28 5.4E-33 160.9 6.4 137 26-162 9-147 (167)
10 2rfm_A Putative ankyrin repeat 99.9 3E-28 1E-32 163.0 7.6 142 21-162 36-179 (192)
11 3c5r_A BARD-1, BRCA1-associate 99.9 2.3E-27 8E-32 150.7 11.1 114 48-161 5-120 (137)
12 3f6q_A Integrin-linked protein 99.9 2.5E-28 8.7E-33 161.7 6.3 137 25-161 10-149 (179)
13 1d9s_A Cyclin-dependent kinase 99.9 6.6E-28 2.3E-32 153.2 7.9 115 47-162 6-123 (136)
14 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.3E-28 7.9E-33 159.2 4.9 136 26-162 11-149 (162)
15 3aaa_C Myotrophin, protein V-1 99.9 1.2E-26 4E-31 144.9 12.1 110 51-160 5-116 (123)
16 4b93_B Ankyrin repeat domain-c 99.9 6.5E-27 2.2E-31 164.4 10.5 128 35-162 68-197 (269)
17 3deo_A Signal recognition part 99.9 4.4E-27 1.5E-31 156.4 6.8 111 50-161 41-154 (183)
18 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.6E-26 1.6E-30 142.2 11.0 111 52-162 1-113 (126)
19 2rfa_A Transient receptor pote 99.9 5.6E-27 1.9E-31 160.9 7.3 136 27-162 10-166 (232)
20 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4E-27 1.4E-31 152.5 6.1 131 30-162 12-145 (156)
21 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.9E-26 1.3E-30 157.8 11.4 136 26-162 11-151 (239)
22 1ikn_D Protein (I-kappa-B-alph 99.9 3.8E-26 1.3E-30 157.2 11.3 138 25-162 50-196 (236)
23 2vge_A RELA-associated inhibit 99.9 1.2E-25 4.1E-30 154.5 13.2 115 48-162 16-135 (229)
24 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.9E-25 6.6E-30 132.9 12.0 93 52-144 1-93 (93)
25 1yyh_A HN1;, notch 1, ankyrin 99.9 6.2E-27 2.1E-31 162.9 5.7 132 31-162 101-235 (253)
26 3aji_A 26S proteasome non-ATPa 99.9 2.8E-26 9.5E-31 157.2 8.6 133 30-162 50-184 (231)
27 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-26 3.9E-31 150.6 6.3 116 30-146 22-138 (156)
28 2rfm_A Putative ankyrin repeat 99.9 4E-26 1.4E-30 152.6 8.4 116 47-162 29-146 (192)
29 1ikn_D Protein (I-kappa-B-alph 99.9 5.5E-26 1.9E-30 156.4 9.2 142 21-162 9-163 (236)
30 3v31_A Ankyrin repeat family A 99.9 9.9E-26 3.4E-30 147.5 9.9 111 52-162 2-114 (167)
31 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.7E-25 9.2E-30 145.9 12.0 115 48-162 9-125 (169)
32 2dzn_A Probable 26S proteasome 99.9 6.8E-26 2.3E-30 154.9 9.3 132 30-161 82-219 (228)
33 3ehr_A Osteoclast-stimulating 99.9 4.6E-26 1.6E-30 155.6 8.3 111 51-161 71-184 (222)
34 3b7b_A Euchromatic histone-lys 99.9 4.2E-26 1.4E-30 156.9 8.1 136 27-162 84-222 (237)
35 3hra_A Ankyrin repeat family p 99.9 2.9E-26 1E-30 154.0 7.2 134 29-162 48-190 (201)
36 3d9h_A CDNA FLJ77766, highly s 99.9 2.3E-25 8E-30 157.6 11.5 117 46-162 52-169 (285)
37 2f8y_A Notch homolog 1, transl 99.9 5.4E-26 1.9E-30 155.0 7.9 134 29-162 67-203 (223)
38 2f8y_A Notch homolog 1, transl 99.9 4.1E-25 1.4E-29 150.6 12.3 138 25-162 30-170 (223)
39 1s70_B 130 kDa myosin-binding 99.9 3.3E-26 1.1E-30 162.3 6.9 87 29-115 49-135 (299)
40 1yyh_A HN1;, notch 1, ankyrin 99.9 1.2E-25 4.1E-30 156.4 9.5 130 32-161 35-168 (253)
41 2etb_A Transient receptor pote 99.9 1.2E-26 3.9E-31 161.6 4.2 132 31-162 57-233 (256)
42 2b0o_E UPLC1; arfgap, structur 99.9 3.2E-26 1.1E-30 163.3 6.4 134 25-162 156-298 (301)
43 2dzn_A Probable 26S proteasome 99.9 9.8E-26 3.3E-30 154.1 8.6 139 24-162 40-186 (228)
44 3jxi_A Vanilloid receptor-rela 99.9 1E-25 3.4E-30 157.1 8.6 134 29-162 58-237 (260)
45 2xai_A ASB-9, ankyrin repeat a 99.9 3.2E-25 1.1E-29 154.9 10.8 135 27-162 10-146 (261)
46 1k1a_A B-cell lymphoma 3-encod 99.9 4.9E-26 1.7E-30 156.7 6.5 118 45-162 108-228 (241)
47 2rfa_A Transient receptor pote 99.9 4.2E-26 1.4E-30 156.5 6.1 138 25-162 42-209 (232)
48 3aji_A 26S proteasome non-ATPa 99.9 4E-26 1.4E-30 156.4 5.8 136 26-161 79-216 (231)
49 3hra_A Ankyrin repeat family p 99.9 8.6E-26 2.9E-30 151.7 7.2 140 23-162 8-152 (201)
50 1oy3_D Transcription factor in 99.9 1.1E-24 3.9E-29 152.9 13.2 117 45-161 150-269 (282)
51 2xai_A ASB-9, ankyrin repeat a 99.9 7.2E-26 2.5E-30 158.2 6.6 137 25-162 41-178 (261)
52 1oy3_D Transcription factor in 99.9 5.4E-26 1.9E-30 159.7 5.9 138 25-162 50-237 (282)
53 3ui2_A Signal recognition part 99.9 2.4E-25 8E-30 154.4 8.8 110 50-160 42-154 (244)
54 4hbd_A KN motif and ankyrin re 99.9 3E-26 1E-30 161.5 4.0 141 22-162 113-262 (276)
55 3t8k_A Uncharacterized protein 99.9 5.8E-26 2E-30 151.5 5.0 137 25-162 11-166 (186)
56 2vge_A RELA-associated inhibit 99.9 2.1E-26 7.3E-31 158.3 3.0 138 25-162 26-200 (229)
57 3kea_A K1L; tropism, ANK repea 99.9 3.1E-26 1.1E-30 162.1 3.9 136 25-162 36-173 (285)
58 2pnn_A Transient receptor pote 99.9 3E-25 1E-29 155.8 8.7 114 49-162 97-245 (273)
59 1n11_A Ankyrin; clathrin, BAND 99.9 1.7E-25 5.8E-30 166.4 7.6 133 30-162 255-389 (437)
60 1awc_B Protein (GA binding pro 99.9 1.4E-24 4.7E-29 140.3 10.9 109 53-162 2-112 (153)
61 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.4E-25 1.9E-29 143.2 9.0 110 52-162 4-115 (162)
62 3ljn_A Hypothetical protein; a 99.9 4.1E-26 1.4E-30 166.2 3.9 114 49-162 134-256 (364)
63 3b7b_A Euchromatic histone-lys 99.9 3.5E-25 1.2E-29 152.2 8.0 139 24-162 48-189 (237)
64 3v30_A DNA-binding protein rfx 99.9 8.9E-25 3E-29 143.6 9.5 110 53-162 2-114 (172)
65 3d9h_A CDNA FLJ77766, highly s 99.9 2.4E-25 8.3E-30 157.5 7.0 134 28-162 67-202 (285)
66 3twr_A Tankyrase-2; ankyrin re 99.9 1.7E-24 5.8E-29 141.4 10.4 114 49-162 4-120 (165)
67 1sw6_A Regulatory protein SWI6 99.9 2.3E-24 7.8E-29 155.2 12.1 123 39-161 116-327 (327)
68 3f6q_A Integrin-linked protein 99.9 1.9E-24 6.6E-29 143.0 10.7 112 51-162 3-117 (179)
69 2etb_A Transient receptor pote 99.9 2E-25 6.9E-30 155.3 6.1 133 27-159 9-181 (256)
70 2pnn_A Transient receptor pote 99.9 2.4E-25 8.1E-30 156.3 6.2 142 21-162 14-196 (273)
71 1k1a_A B-cell lymphoma 3-encod 99.9 5.4E-25 1.8E-29 151.5 7.3 137 26-162 52-195 (241)
72 1bi7_B P16INK4A, MTS1, multipl 99.9 7.1E-26 2.4E-30 146.9 2.5 114 48-162 7-123 (156)
73 1s70_B 130 kDa myosin-binding 99.9 3.1E-24 1E-28 152.2 11.1 113 49-161 36-150 (299)
74 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.2E-24 1.1E-28 138.8 9.9 109 53-162 2-113 (156)
75 2l6b_A NR1C; ankyrin, consensu 99.9 1.6E-24 5.4E-29 133.6 7.9 105 49-153 5-111 (115)
76 3jxi_A Vanilloid receptor-rela 99.9 2.6E-25 9E-30 155.0 4.7 139 24-162 9-188 (260)
77 3kea_A K1L; tropism, ANK repea 99.9 1.1E-24 3.9E-29 154.1 7.8 115 46-162 24-141 (285)
78 1d9s_A Cyclin-dependent kinase 99.9 2.1E-25 7.3E-30 141.5 3.6 122 22-144 14-136 (136)
79 1wdy_A 2-5A-dependent ribonucl 99.9 1.7E-24 5.9E-29 151.9 7.9 134 29-162 14-160 (285)
80 3ljn_A Hypothetical protein; a 99.9 9.6E-25 3.3E-29 158.9 6.7 112 51-162 82-223 (364)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-24 3.8E-29 138.2 5.8 119 24-142 18-136 (136)
82 4hbd_A KN motif and ankyrin re 99.9 3.6E-24 1.2E-28 150.9 8.7 117 46-162 104-228 (276)
83 1n11_A Ankyrin; clathrin, BAND 99.9 1.1E-24 3.7E-29 162.0 6.1 131 31-161 25-157 (437)
84 3jue_A Arfgap with coiled-coil 99.9 1.6E-23 5.6E-28 152.8 11.0 114 49-162 195-313 (368)
85 3utm_A Tankyrase-1; tankyrase, 99.9 9E-24 3.1E-28 152.3 9.0 137 23-159 27-166 (351)
86 3eu9_A Huntingtin-interacting 99.9 4.8E-24 1.6E-28 146.3 7.2 135 26-160 15-152 (240)
87 2fo1_E LIN-12 protein; beta-ba 99.9 2.4E-24 8.2E-29 157.6 5.9 134 29-162 208-358 (373)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-23 3.7E-28 131.3 7.1 114 31-144 13-126 (126)
89 1wdy_A 2-5A-dependent ribonucl 99.9 2.4E-23 8.2E-28 146.1 9.4 134 29-162 48-194 (285)
90 2fo1_E LIN-12 protein; beta-ba 99.9 1.8E-23 6.2E-28 153.0 8.9 140 23-162 127-291 (373)
91 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.4E-24 4.6E-29 150.0 2.6 140 23-162 40-193 (239)
92 3lvq_E ARF-GAP with SH3 domain 99.9 5.4E-23 1.8E-27 155.6 11.2 97 50-146 168-267 (497)
93 3lvq_E ARF-GAP with SH3 domain 99.9 1.5E-23 5.1E-28 158.6 8.0 110 53-162 132-252 (497)
94 1dcq_A PYK2-associated protein 99.9 1.2E-22 4E-27 143.4 12.0 107 49-161 165-274 (278)
95 1dcq_A PYK2-associated protein 99.9 1E-22 3.4E-27 143.7 11.5 110 53-162 130-250 (278)
96 2b0o_E UPLC1; arfgap, structur 99.9 8.5E-23 2.9E-27 145.6 10.7 111 52-162 150-271 (301)
97 3utm_A Tankyrase-1; tankyrase, 99.9 4.2E-23 1.4E-27 148.8 8.8 129 31-159 189-322 (351)
98 3eu9_A Huntingtin-interacting 99.9 2.7E-23 9.1E-28 142.6 6.7 114 49-162 105-222 (240)
99 2zgd_A 3 repeat synthetic anky 99.9 2E-21 6.7E-26 119.0 11.6 94 45-138 16-109 (110)
100 3jue_A Arfgap with coiled-coil 99.9 6.4E-22 2.2E-26 144.4 8.2 130 31-160 211-347 (368)
101 4g8k_A 2-5A-dependent ribonucl 99.9 3.1E-22 1.1E-26 144.3 5.8 113 50-162 22-180 (337)
102 4g8k_A 2-5A-dependent ribonucl 99.9 3.4E-21 1.2E-25 138.9 11.0 63 84-146 23-86 (337)
103 3aaa_C Myotrophin, protein V-1 99.8 1E-22 3.5E-27 126.9 1.5 106 24-129 11-116 (123)
104 3t8k_A Uncharacterized protein 99.8 1.8E-21 6E-26 129.8 6.7 107 53-161 6-126 (186)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5.8E-21 2E-25 113.4 7.3 78 85-162 1-80 (93)
106 3ehr_A Osteoclast-stimulating 99.8 4.4E-22 1.5E-26 135.8 2.0 120 27-146 80-200 (222)
107 3c5r_A BARD-1, BRCA1-associate 99.8 1.1E-22 3.8E-27 129.0 -1.0 120 25-144 15-134 (137)
108 3ui2_A Signal recognition part 99.8 1.6E-20 5.4E-25 130.1 8.6 119 25-144 50-185 (244)
109 3deo_A Signal recognition part 99.8 1E-20 3.5E-25 125.6 7.2 104 25-129 49-153 (183)
110 2aja_A Ankyrin repeat family p 99.8 8E-23 2.7E-27 149.6 -5.2 105 52-162 127-237 (376)
111 2aja_A Ankyrin repeat family p 99.8 1.7E-21 5.9E-26 142.5 -0.3 113 49-162 88-211 (376)
112 2zgd_A 3 repeat synthetic anky 99.8 2.2E-19 7.7E-24 109.7 5.9 83 80-162 18-102 (110)
113 1sw6_A Regulatory protein SWI6 99.8 5E-20 1.7E-24 132.6 2.5 103 57-159 101-210 (327)
114 2l6b_A NR1C; ankyrin, consensu 99.8 6.1E-19 2.1E-23 108.4 6.0 82 81-162 4-87 (115)
115 1gp8_A Protein (scaffolding pr 71.8 3.5 0.00012 19.2 2.2 19 55-73 15-33 (40)
116 3zrh_A Ubiquitin thioesterase 42.0 1.1E+02 0.0036 22.9 6.7 47 61-107 30-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.4e-32 Score=178.60 Aligned_cols=139 Identities=32% Similarity=0.385 Sum_probs=128.6
Q ss_pred eeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHH
Q 031235 24 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 103 (163)
.+.+++.++.+.++.++..+......+..|.||||+|+..++.++++.|++.|++++.++..|.||||+|+..|+.++++
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~ 87 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVK 87 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHH
Confidence 34556678888888888777777778889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++ +..|+|||++|+.+|+
T Consensus 88 ~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 88 LLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGN 148 (169)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999987 7789999999999886
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=173.33 Aligned_cols=114 Identities=31% Similarity=0.352 Sum_probs=89.8
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 128 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 128 (163)
.+..|.||+++|+..++.++++.|++.|++++.+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 115 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~ 194 (269)
T 4b93_B 115 RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVI 194 (269)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred cCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHH
Confidence 33344444444444444555555555666677777888899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 129 YGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|+.+++++|+++|++++ +..|+||||+|+++|+
T Consensus 195 ~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 195 EKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 999999999999999876 7788899999988764
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=1.3e-27 Score=151.75 Aligned_cols=116 Identities=31% Similarity=0.404 Sum_probs=107.6
Q ss_pred CCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 031235 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (163)
Q Consensus 47 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 126 (163)
......+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|
T Consensus 8 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 8 HHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CcccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 34556799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 127 KYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~ 125 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN 125 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCC
Confidence 99999999999999999976 7788999999999886
No 4
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.1e-28 Score=162.18 Aligned_cols=140 Identities=29% Similarity=0.386 Sum_probs=126.5
Q ss_pred eeeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHH
Q 031235 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (163)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 102 (163)
....+++.++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 96 (169)
T 2y1l_E 17 KLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIV 96 (169)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred hHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 34455556777777777777666667778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 103 ~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|.|||++|+..|+
T Consensus 97 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 97 EVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGN 158 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999976 6788999999999886
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=2.4e-28 Score=160.76 Aligned_cols=137 Identities=22% Similarity=0.263 Sum_probs=122.0
Q ss_pred eeeccCCCCcCCCCCCCcCC-CCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDEL-TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 104 (163)
.++..++.+.++.++..+.. ....+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++
T Consensus 8 ~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 87 (172)
T 3v30_A 8 QLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGL 87 (172)
T ss_dssp HHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHH
Confidence 34445666666666665544 45567789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 105 ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 88 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 88 LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp HHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCc
Confidence 999999999999999999999999999999999999999987 6788999999998875
No 6
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=2e-27 Score=156.35 Aligned_cols=108 Identities=42% Similarity=0.552 Sum_probs=104.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 031235 55 MQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEV 134 (163)
Q Consensus 55 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~ 134 (163)
++|+.||..|+.++|+.|++.|++++.+|..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 135 YNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 135 ~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+++|+++|++++ +..|+||||+|+..|+
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~ 115 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGH 115 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCC
Confidence 999999999987 7789999999999886
No 7
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=3.1e-28 Score=159.18 Aligned_cols=137 Identities=26% Similarity=0.305 Sum_probs=119.0
Q ss_pred eeeeccCCCCcCCCCCCCc-CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQD-ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 103 (163)
+.+...++.+.++.++... ......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++
T Consensus 13 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 92 (165)
T 3twr_A 13 LEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAE 92 (165)
T ss_dssp HHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHH
Confidence 3344456666666655533 334445566889999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+|||++|+. |+
T Consensus 93 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~ 152 (165)
T 3twr_A 93 LLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GD 152 (165)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TC
T ss_pred HHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CC
Confidence 9999999999999999999999999999999999999999977 7788999999877 54
No 8
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=2.2e-28 Score=158.20 Aligned_cols=114 Identities=30% Similarity=0.354 Sum_probs=109.0
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 128 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 128 (163)
.+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+.
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 46679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 129 YGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|+.+++++|+++|++++ +..|+|||++|+..|+
T Consensus 110 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 999999999999999987 7788999999999886
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.6e-28 Score=160.89 Aligned_cols=137 Identities=20% Similarity=0.228 Sum_probs=123.4
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|
T Consensus 9 ~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 88 (167)
T 3v31_A 9 QLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 88 (167)
T ss_dssp HHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 34445666666666666666666778899999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+|||++|+..|+
T Consensus 89 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 89 LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp HHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 99999999999999999999999999999999999999976 7788999999998876
No 10
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3e-28 Score=163.00 Aligned_cols=142 Identities=20% Similarity=0.203 Sum_probs=127.6
Q ss_pred CceeeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHH
Q 031235 21 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVE 100 (163)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 100 (163)
..+...++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 115 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSE 115 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 34444455567777777777666666677788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 101 ~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|.|||++|+..|+
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 116 MSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR 179 (192)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCc
Confidence 9999999999999999999999999999999999999999999987 7788999999999886
No 11
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=2.3e-27 Score=150.70 Aligned_cols=114 Identities=30% Similarity=0.348 Sum_probs=107.9
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 45677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 128 YYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
..|+.+++++|+++|++++ +..|.|||++|+..+
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhcc
Confidence 9999999999999999977 778899999998754
No 12
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=2.5e-28 Score=161.73 Aligned_cols=137 Identities=26% Similarity=0.268 Sum_probs=121.0
Q ss_pred eeeeccCCCCcCCCCCCC-cCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 103 (163)
+.++..++.+.++.++.. +......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.++++
T Consensus 10 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 89 (179)
T 3f6q_A 10 FTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQ 89 (179)
T ss_dssp HHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 444455666666665555 3345566778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
+|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+|||++|+..+
T Consensus 90 ~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 90 KLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPL 149 (179)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHH
T ss_pred HHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999987 788999999998654
No 13
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=6.6e-28 Score=153.16 Aligned_cols=115 Identities=24% Similarity=0.312 Sum_probs=108.3
Q ss_pred CCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCC-CCcHHHH
Q 031235 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRW-GSTAAAD 125 (163)
Q Consensus 47 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~t~l~~ 125 (163)
...+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+. ++.+++++|++.|++++.++.. |.||||+
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 84 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHD 84 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHH
Confidence 3456679999999999999999999999999999999999999999999 9999999999999999999999 9999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 126 AKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 123 (136)
T 1d9s_A 85 AAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGH 123 (136)
T ss_dssp HHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 999999999999999999977 6788999999998775
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.3e-28 Score=159.24 Aligned_cols=136 Identities=20% Similarity=0.178 Sum_probs=121.0
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
.++..++.+.++.++..+......+..|.||||+|+. |+.+++++|++.|++++.++..|.||||+|+..++.+++++|
T Consensus 11 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 89 (162)
T 1ihb_A 11 SAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTL 89 (162)
T ss_dssp HHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3444566666666666666666677889999999998 999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-C--CCCCCceeeeeccCCC
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV-P--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~-~--~~~~~t~l~~A~~~g~ 162 (163)
++.|++++.++..|.||||+|+..|+.+++++|+++|++. + +..|+||||+|+..|+
T Consensus 90 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 149 (162)
T 1ihb_A 90 LEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR 149 (162)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC
Confidence 9999999999999999999999999999999999999973 3 7788999999999886
No 15
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=1.2e-26 Score=144.91 Aligned_cols=110 Identities=29% Similarity=0.376 Sum_probs=103.5
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 031235 51 LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG 130 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g 130 (163)
..+.++||+|+..|+.++++.|++.|++++.++..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCC--CCCCCceeeeeccC
Q 031235 131 NVEVYNILKARGAKVP--NGILHIFFHFRKPR 160 (163)
Q Consensus 131 ~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~ 160 (163)
+.+++++|+++|++++ +..|+||||+|...
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 9999999999999976 77889999999653
No 16
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=6.5e-27 Score=164.42 Aligned_cols=128 Identities=25% Similarity=0.277 Sum_probs=114.9
Q ss_pred cCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCC
Q 031235 35 PIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDA 114 (163)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~ 114 (163)
.+..++..+......+..|.||||+|+..|+.+++++|++.|++++..+..|.||+++|+..++.+++++|++.|++++.
T Consensus 68 ~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~ 147 (269)
T 4b93_B 68 RLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK 147 (269)
T ss_dssp -------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC
Confidence 44555666666667788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 115 RDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 115 ~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+|..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCC
Confidence 99999999999999999999999999999987 7788999999999987
No 17
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=4.4e-27 Score=156.42 Aligned_cols=111 Identities=29% Similarity=0.279 Sum_probs=104.7
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHH
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADAKY 128 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~a~~ 128 (163)
+..|.||||+|+..|+.++++.|++ |++++.++..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578999999999999999999999 99999999999999999999999999999999999999988 889999999999
Q ss_pred cCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 129 YGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
.|+.+++++|+++|++++ +..|+||||+|+..+
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc
Confidence 999999999999999986 778899999998754
No 18
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=4.6e-26 Score=142.16 Aligned_cols=111 Identities=39% Similarity=0.533 Sum_probs=105.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
+|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 132 VEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 132 ~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|+++|++++ +..|+|||++|+..|+
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 113 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 113 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCc
Confidence 999999999999976 6778899999998876
No 19
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=5.6e-27 Score=160.86 Aligned_cols=136 Identities=19% Similarity=0.267 Sum_probs=118.4
Q ss_pred eeccCCCCcCCCCCCC-cCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCC-----cccCCCCChHHHHHHhcCcHH
Q 031235 27 FGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDV-----NSIDLDGRTALHIAACEGHVE 100 (163)
Q Consensus 27 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~-----~~~~~~g~t~l~~a~~~~~~~ 100 (163)
++..++.+.++.++.. +......+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+
T Consensus 10 A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 89 (232)
T 2rfa_A 10 AAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVN 89 (232)
T ss_dssp HHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHH
Confidence 3445666666666655 5555667788999999999999999999999999875 566778999999999999999
Q ss_pred HHHHHHhcCCCCCCCCC-------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 101 VVKLLLSKKANIDARDR-------------WGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 101 ~~~~ll~~~~~~~~~~~-------------~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 90 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~ 166 (232)
T 2rfa_A 90 LVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPN 166 (232)
T ss_dssp HHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSC
T ss_pred HHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 99999999999988765 79999999999999999999999999987 7789999999999886
No 20
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=4e-27 Score=152.51 Aligned_cols=131 Identities=21% Similarity=0.213 Sum_probs=114.3
Q ss_pred cCCCCcCCCCCCC-cCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc
Q 031235 30 QSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 108 (163)
Q Consensus 30 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 108 (163)
.++.+.++.++.. +......+..|.||||+ +..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.
T Consensus 12 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 90 (156)
T 1bd8_A 12 RGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEH 90 (156)
T ss_dssp HTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred hCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 3444444444433 12344556779999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 109 KANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 109 ~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|++++.++..|.||||+|+..|+.+++++|++. ++++ +..|.|||++|+..|+
T Consensus 91 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 91 GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCC
T ss_pred CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999999999999999999999999999 8766 7788999999999886
No 21
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=3.9e-26 Score=157.76 Aligned_cols=136 Identities=26% Similarity=0.163 Sum_probs=103.7
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
...+.+..+.++.++..+... ..+..+.|+||+|+..|+.++++.|++.|++++.++..|.||||+|+..|+.+++++|
T Consensus 11 ~a~~~~~~~~~~~ll~~g~~~-~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 89 (239)
T 1ycs_B 11 PGKRTNLRKTGSERIAHGMRV-KFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFL 89 (239)
T ss_dssp ---------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred hhhhhhhHHHHHHHhccCCCc-ccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 334445556666655555333 3346789999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCC-ceeeee--ccCCC
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILH-IFFHFR--KPRGH 162 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~-t~l~~A--~~~g~ 162 (163)
++.|++++.+|..|.||||+|+..|+.+++++|+++|++++ +..+. ||||+| +..|+
T Consensus 90 l~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 90 VQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp HHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTC
T ss_pred HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999987 44444 999999 66665
No 22
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=3.8e-26 Score=157.22 Aligned_cols=138 Identities=19% Similarity=0.143 Sum_probs=115.3
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCChHHHHHHhcCc
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGID------VNSIDLDGRTALHIAACEGH 98 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~------~~~~~~~g~t~l~~a~~~~~ 98 (163)
..++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++
T Consensus 50 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 129 (236)
T 1ikn_D 50 HLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 129 (236)
T ss_dssp HHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC
Confidence 334445666677777777666666778889999999999999999999988765 45667788999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 99 VEVVKLLLSKKANIDARDR-WGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 99 ~~~~~~ll~~~~~~~~~~~-~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++ +..|+|||++|+..|+
T Consensus 130 ~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 130 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc
Confidence 9999999999999998887 89999999999999999999999999877 6778899999998876
No 23
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.2e-25 Score=154.55 Aligned_cols=115 Identities=24% Similarity=0.258 Sum_probs=107.7
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
..+..+.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~ 95 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAA 95 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 45567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC---CCCCCceeeee--ccCCC
Q 031235 128 YYGNVEVYNILKARGAKVP---NGILHIFFHFR--KPRGH 162 (163)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~---~~~~~t~l~~A--~~~g~ 162 (163)
..|+.+++++|++.|++++ +..|+||||+| +..|+
T Consensus 96 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~ 135 (229)
T 2vge_A 96 SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGY 135 (229)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTH
T ss_pred HcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcCh
Confidence 9999999999999999987 35889999999 77764
No 24
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.93 E-value=1.9e-25 Score=132.90 Aligned_cols=93 Identities=42% Similarity=0.578 Sum_probs=89.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
+|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC
Q 031235 132 VEVYNILKARGAK 144 (163)
Q Consensus 132 ~~~~~~Ll~~g~~ 144 (163)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=6.2e-27 Score=162.88 Aligned_cols=132 Identities=24% Similarity=0.187 Sum_probs=104.4
Q ss_pred CCCCcCCCCCCCcC-CCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcC
Q 031235 31 SSLDPIRRSPVQDE-LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK 109 (163)
Q Consensus 31 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 109 (163)
+..+.++.++..+. .....+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|
T Consensus 101 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 180 (253)
T 1yyh_A 101 DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 180 (253)
T ss_dssp TCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 44444444444433 34455667888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 110 ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 110 ~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++++.++..|.||||+|+..|+.+++++|+++|++++ +..|+||+++|+..|+
T Consensus 181 a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 181 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCC
Confidence 8888888888888888888888888888888888866 6677888888888876
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.93 E-value=2.8e-26 Score=157.19 Aligned_cols=133 Identities=24% Similarity=0.233 Sum_probs=79.9
Q ss_pred cCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcC
Q 031235 30 QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK 109 (163)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 109 (163)
.++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.|
T Consensus 50 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 129 (231)
T 3aji_A 50 AGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129 (231)
T ss_dssp HTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 34444444444444444445555666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 110 ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 110 ~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 130 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 130 ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCC
Confidence 6666666666666666666666666666666666554 4455566666665554
No 27
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.2e-26 Score=150.64 Aligned_cols=116 Identities=24% Similarity=0.291 Sum_probs=56.8
Q ss_pred cCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCh-HHHHHHhcCcHHHHHHHHhc
Q 031235 30 QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRT-ALHIAACEGHVEVVKLLLSK 108 (163)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~ll~~ 108 (163)
.++.+.++.++..+......+..|.||||+|+ .|+.+++++|++.|++++.++..|.| |||+|+..++.+++++|++.
T Consensus 22 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ 100 (156)
T 1bi7_B 22 RGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100 (156)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHc
Confidence 34444444444444333344444555555543 45555555555555555555555554 55555555555555555555
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 109 KANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 109 ~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
|++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 101 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~ 138 (156)
T 1bi7_B 101 GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR 138 (156)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----
T ss_pred CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC
Confidence 55555555555555555555555555555555555543
No 28
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=4e-26 Score=152.61 Aligned_cols=116 Identities=22% Similarity=0.220 Sum_probs=109.6
Q ss_pred CCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 031235 47 VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (163)
Q Consensus 47 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 126 (163)
...+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 127 KYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGR 146 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 99999999999999999987 6778999999998876
No 29
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=5.5e-26 Score=156.43 Aligned_cols=142 Identities=19% Similarity=0.138 Sum_probs=121.4
Q ss_pred CceeeeeeccCCCCcCCCCCCCcC----CCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhc
Q 031235 21 NNMRFSFGRQSSLDPIRRSPVQDE----LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACE 96 (163)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~ 96 (163)
..+...+...++.+.++.++.... .....+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 88 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQ 88 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHH
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 344445555677777777766543 3556677899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcCCC------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CC-CCCceeeeeccCCC
Q 031235 97 GHVEVVKLLLSKKAN------IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NG-ILHIFFHFRKPRGH 162 (163)
Q Consensus 97 ~~~~~~~~ll~~~~~------~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~-~~~t~l~~A~~~g~ 162 (163)
++.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|+++|++++ +. .|+||||+|+..|+
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~ 163 (236)
T 1ikn_D 89 GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN 163 (236)
T ss_dssp TCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 999999999999875 46678889999999999999999999999999987 43 78999999999886
No 30
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=9.9e-26 Score=147.54 Aligned_cols=111 Identities=20% Similarity=0.217 Sum_probs=106.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
.|.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 132 VEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 132 ~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 114 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNH 114 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCC
Confidence 999999999999987 6778999999999886
No 31
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=2.7e-25 Score=145.89 Aligned_cols=115 Identities=35% Similarity=0.461 Sum_probs=106.6
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
.....+.++|++|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 34556889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 128 YYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 125 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGH 125 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 9999999999999999987 6778999999999886
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=6.8e-26 Score=154.89 Aligned_cols=132 Identities=16% Similarity=0.067 Sum_probs=97.4
Q ss_pred cCCCCcCCCCCCCc--CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHh
Q 031235 30 QSSLDPIRRSPVQD--ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS 107 (163)
Q Consensus 30 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 107 (163)
.++.+.++.++..+ ......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 34555554444444 4444556667788888888888888888888887777777778888888888888888888887
Q ss_pred cC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCC--CCCCCceeeeeccCC
Q 031235 108 KK-ANIDARDRWGSTAAADAKYYGNVEVYNILK-ARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 108 ~~-~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll-~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
.| ++++..+..|.||||+|+..|+.+++++|+ +.|++++ +..|+||+++|+..+
T Consensus 162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTT
T ss_pred cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHH
Confidence 77 777777778888888888888888888888 7777766 667778888877643
No 33
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=4.6e-26 Score=155.61 Aligned_cols=111 Identities=24% Similarity=0.384 Sum_probs=105.4
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHc
Q 031235 51 LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKYY 129 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~a~~~ 129 (163)
..|.||||+|+..|+.++++.|++.|++++.++..|.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence 3568999999999999999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 130 GNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 130 g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
|+.+++++|+++|++++ +..|+|||++|+..|
T Consensus 151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 184 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAA 184 (222)
T ss_dssp TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHH
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchh
Confidence 99999999999999976 778999999998755
No 34
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=4.2e-26 Score=156.86 Aligned_cols=136 Identities=17% Similarity=0.176 Sum_probs=112.4
Q ss_pred eeccCCCCcCCCCCCCc-CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHH
Q 031235 27 FGRQSSLDPIRRSPVQD-ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 27 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
+...+..+.++.++..+ ......+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 33445555555555554 34445667788999999999999999999999988888888899999999999999999999
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+.+|+
T Consensus 164 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 164 LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp HTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHH
Confidence 99999999888899999999999999999999999999876 7788899999988775
No 35
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=2.9e-26 Score=154.03 Aligned_cols=134 Identities=22% Similarity=0.268 Sum_probs=87.4
Q ss_pred ccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCChHHHHHHhcCcHHHHHHHHh
Q 031235 29 RQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLN-EGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS 107 (163)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 107 (163)
..++.+.++.++..+......+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..++.+++++|++
T Consensus 48 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 127 (201)
T 3hra_A 48 HNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLE 127 (201)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 3455555555555555555555666677777777777777777663 445666666666777777777777777777776
Q ss_pred cC-CCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 108 KK-ANIDARDRWGSTAAADAKYYGN-----VEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 108 ~~-~~~~~~~~~~~t~l~~a~~~g~-----~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.| ++++..+..|.||||+|+..++ .+++++|+++|++++ +..|+||||+|+..|+
T Consensus 128 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 128 DGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp HCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred cCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Confidence 66 6666666677777777776666 677777777777665 5566677777766654
No 36
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=2.3e-25 Score=157.56 Aligned_cols=117 Identities=26% Similarity=0.302 Sum_probs=100.8
Q ss_pred CCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 031235 46 TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 125 (163)
Q Consensus 46 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 125 (163)
....+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|++++..+..|.||||+
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~ 131 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFN 131 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 34567778899999999999999999999998888888889999999999999999999999999998888888999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCC-CCCCCceeeeeccCCC
Q 031235 126 AKYYGNVEVYNILKARGAKVP-NGILHIFFHFRKPRGH 162 (163)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~-~~~~~t~l~~A~~~g~ 162 (163)
|+..|+.+++++|++.|++++ ...|.||||+|+..|+
T Consensus 132 A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 132 ACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGH 169 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTC
T ss_pred HHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCC
Confidence 999899999999988888876 5567788888887765
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=5.4e-26 Score=154.99 Aligned_cols=134 Identities=24% Similarity=0.183 Sum_probs=108.8
Q ss_pred ccCCCCcCCCCCCCcC-CCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHh
Q 031235 29 RQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS 107 (163)
Q Consensus 29 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 107 (163)
..++.+.++.++..+. .....+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|++
T Consensus 67 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 146 (223)
T 2f8y_A 67 SADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 146 (223)
T ss_dssp HTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 3455555555444443 444556778888999988888999998888888888888888899999999999999999998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 108 KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 108 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|.||+++|+..|+
T Consensus 147 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 147 NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred cCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 888888888888899999999999999999999988876 6677899998888775
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=4.1e-25 Score=150.60 Aligned_cols=138 Identities=20% Similarity=0.137 Sum_probs=104.2
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCChHHHHHHhcCcHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGI-DVNSIDLDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~ 103 (163)
..++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..++.++++
T Consensus 30 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 109 (223)
T 2f8y_A 30 HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLE 109 (223)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHH
Confidence 33444566666666666665566666777888888888888888888887765 67777777888888888888888888
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 110 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 110 DLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 170 (223)
T ss_dssp HHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred HHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCC
Confidence 8888888888778888888888888888888888888888766 5667788888877665
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=3.3e-26 Score=162.32 Aligned_cols=87 Identities=23% Similarity=0.282 Sum_probs=52.6
Q ss_pred ccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc
Q 031235 29 RQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 108 (163)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 108 (163)
..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.
T Consensus 49 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 128 (299)
T 1s70_B 49 SSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQ 128 (299)
T ss_dssp HHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Confidence 34555555555544444444555566666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCC
Q 031235 109 KANIDAR 115 (163)
Q Consensus 109 ~~~~~~~ 115 (163)
|++++..
T Consensus 129 g~~~~~~ 135 (299)
T 1s70_B 129 GAHVGAV 135 (299)
T ss_dssp TCCTTCC
T ss_pred CCCCCCc
Confidence 6555443
No 40
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=1.2e-25 Score=156.39 Aligned_cols=130 Identities=22% Similarity=0.179 Sum_probs=64.9
Q ss_pred CCCcCCCCCCCcCCCC-CCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCC
Q 031235 32 SLDPIRRSPVQDELTV-PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 110 (163)
Q Consensus 32 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 110 (163)
+.+.++.++..+.... ..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+.
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4444444444443332 234556666666666666666666666666666666666666666666666666666665554
Q ss_pred -CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 111 -NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 111 -~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
+++..+..|.||||+|+..|+.+++++|++.|++++ +..|+||||+|+..|
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 168 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN 168 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 455555555555555555555555555555555544 334445555555444
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=1.2e-26 Score=161.59 Aligned_cols=132 Identities=23% Similarity=0.224 Sum_probs=114.7
Q ss_pred CCCCcCCCCCCCcCCCC-----------CCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-------------C
Q 031235 31 SSLDPIRRSPVQDELTV-----------PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLD-------------G 86 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-------------g 86 (163)
++.+.++.++..+.... ..+..|.||||+|+..|+.+++++|++.|++++..+.. |
T Consensus 57 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g 136 (256)
T 2etb_A 57 GVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFG 136 (256)
T ss_dssp TBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSC
T ss_pred chHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCC
Confidence 66666655554332221 23367999999999999999999999999999988876 9
Q ss_pred ChHHHHHHhcCcHHHHHHHHh---cCCCCCCCCCCCCcHHHHHHH--cCCHH-------HHHHHHHcCCCC-------C-
Q 031235 87 RTALHIAACEGHVEVVKLLLS---KKANIDARDRWGSTAAADAKY--YGNVE-------VYNILKARGAKV-------P- 146 (163)
Q Consensus 87 ~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~t~l~~a~~--~g~~~-------~~~~Ll~~g~~~-------~- 146 (163)
.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+. .++.+ ++++|+++|+++ +
T Consensus 137 ~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 216 (256)
T 2etb_A 137 ELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEI 216 (256)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccc
Confidence 999999999999999999999 999999999999999999999 88888 999999999987 3
Q ss_pred -CCCCCceeeeeccCCC
Q 031235 147 -NGILHIFFHFRKPRGH 162 (163)
Q Consensus 147 -~~~~~t~l~~A~~~g~ 162 (163)
+..|+||||+|+..|+
T Consensus 217 ~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 217 SNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp CCTTSCCHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHhCC
Confidence 7789999999999886
No 42
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=3.2e-26 Score=163.28 Aligned_cols=134 Identities=19% Similarity=0.148 Sum_probs=109.0
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCC------CCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCChHHHHHHh
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVP------ENLDSTMQLLFMACS---GDVKGVEDLLNEGIDVNSIDLDGRTALHIAAC 95 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~ 95 (163)
+.+...++.+.+..++..+..... .+..|.||||+|+.. ++.+++++|++.|++++.+|..|.||||+|+.
T Consensus 156 ~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~ 235 (301)
T 2b0o_E 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL 235 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHH
T ss_pred hhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 344445555555555444433333 577899999999987 89999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCceeeeeccCCC
Q 031235 96 EGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPNGILHIFFHFRKPRGH 162 (163)
Q Consensus 96 ~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~~~~~~t~l~~A~~~g~ 162 (163)
.|+.+++++|++.|++++.+|..|.|||++|+..|+.+++++|+++|++ .|.||||+|+..|+
T Consensus 236 ~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~----~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 236 YNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----TFAFPLHVDYSWVI 298 (301)
T ss_dssp TTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH----TTSSCCC-------
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----CCCChhHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999987 46899999999886
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=9.8e-26 Score=154.10 Aligned_cols=139 Identities=17% Similarity=0.160 Sum_probs=118.4
Q ss_pred eeeeeccCCCCcCCCCCCCc--CCCCC-CCCCchHHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCChHHHHHHhcCc
Q 031235 24 RFSFGRQSSLDPIRRSPVQD--ELTVP-ENLDSTMQLLFMACSGDVKGVEDLLNEG--IDVNSIDLDGRTALHIAACEGH 98 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~l~~a~~~g~~~~~~~ll~~~--~~~~~~~~~g~t~l~~a~~~~~ 98 (163)
...+...++.+.++.++..+ ..... .+..|.||||+|+..|+.+++++|++.| ++++..+..|.||||+|+..++
T Consensus 40 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~ 119 (228)
T 2dzn_A 40 LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW 119 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCC
Confidence 33344446666665555554 22223 6678999999999999999999999998 8888889999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCC--CCCCCceeeeeccCCC
Q 031235 99 VEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG-AKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 99 ~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g-~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.| ++++ +..|+||||+|+..|+
T Consensus 120 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 120 FEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 186 (228)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC
T ss_pred HhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999 7765 7788999999999886
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1e-25 Score=157.09 Aligned_cols=134 Identities=20% Similarity=0.174 Sum_probs=116.3
Q ss_pred ccCCCCcCCCCCCCc-----------CCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC--------------
Q 031235 29 RQSSLDPIRRSPVQD-----------ELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-------------- 83 (163)
Q Consensus 29 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-------------- 83 (163)
..+..+.++.++..+ ......+..|.||||+|+..|+.+++++|++.|++++..+
T Consensus 58 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 58 SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYF 137 (260)
T ss_dssp BTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSC
T ss_pred hcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccc
Confidence 346666666555433 1123334579999999999999999999999999999888
Q ss_pred CCCChHHHHHHhcCcHHHHHHHHh---cCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCC------
Q 031235 84 LDGRTALHIAACEGHVEVVKLLLS---KKANIDARDRWGSTAAADAKYYGN---------VEVYNILKARGAKV------ 145 (163)
Q Consensus 84 ~~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~t~l~~a~~~g~---------~~~~~~Ll~~g~~~------ 145 (163)
..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++ .+++++|+++|+++
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~ 217 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL 217 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCG
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccch
Confidence 589999999999999999999999 999999999999999999999887 79999999999976
Q ss_pred ---CCCCCCceeeeeccCCC
Q 031235 146 ---PNGILHIFFHFRKPRGH 162 (163)
Q Consensus 146 ---~~~~~~t~l~~A~~~g~ 162 (163)
.+..|+||||+|+..|+
T Consensus 218 ~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 218 EALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp GGCCCTTSCCHHHHHHHTTC
T ss_pred hhcccCCCCCHHHHHHHcCC
Confidence 47889999999999987
No 45
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=3.2e-25 Score=154.93 Aligned_cols=135 Identities=22% Similarity=0.175 Sum_probs=117.1
Q ss_pred eeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHH
Q 031235 27 FGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLL 106 (163)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 106 (163)
++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+
T Consensus 10 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (261)
T 2xai_A 10 AAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL 89 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34456666666666666666677788999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 107 SKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 107 ~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+.|++++. +..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 90 ~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 90 QHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp HTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred HCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCC
Confidence 99998875 4558999999999999999999999999987 6678899999998876
No 46
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.92 E-value=4.9e-26 Score=156.72 Aligned_cols=118 Identities=25% Similarity=0.261 Sum_probs=100.7
Q ss_pred CCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q 031235 45 LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 123 (163)
Q Consensus 45 ~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 123 (163)
.....+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..++.+++++|++.|++++..+..|.|||
T Consensus 108 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 187 (241)
T 1k1a_A 108 DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 187 (241)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 344456678889999998899999999998888888777 7788999999999999999999999999988888899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|+|+..|+.+++++|+++|++++ +..|+|||++|+..|+
T Consensus 188 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 188 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCc
Confidence 99999999999999999998876 6678899999887654
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=4.2e-26 Score=156.50 Aligned_cols=138 Identities=23% Similarity=0.227 Sum_probs=117.2
Q ss_pred eeeeccCCCCcCCCCCCCcCCC-----CCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC-------------CC
Q 031235 25 FSFGRQSSLDPIRRSPVQDELT-----VPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDL-------------DG 86 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-------------~g 86 (163)
..++..++.+.++.++..+... ...+..|.||||+|+..|+.+++++|++.|++++..+. .|
T Consensus 42 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g 121 (232)
T 2rfa_A 42 HIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYG 121 (232)
T ss_dssp HHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCC
T ss_pred HHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCC
Confidence 3334446665555554443322 34556899999999999999999999999999887765 79
Q ss_pred ChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHH----HHHHHcCCCC--------CCCCCCcee
Q 031235 87 RTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVY----NILKARGAKV--------PNGILHIFF 154 (163)
Q Consensus 87 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~----~~Ll~~g~~~--------~~~~~~t~l 154 (163)
.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++ ++|++.|++. .+..|+|||
T Consensus 122 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl 201 (232)
T 2rfa_A 122 EHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPF 201 (232)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHH
Confidence 9999999999999999999999999999999999999999999999988 9999999965 377899999
Q ss_pred eeeccCCC
Q 031235 155 HFRKPRGH 162 (163)
Q Consensus 155 ~~A~~~g~ 162 (163)
|+|+..|+
T Consensus 202 ~~A~~~g~ 209 (232)
T 2rfa_A 202 KLAGVEGN 209 (232)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 99999886
No 48
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=4e-26 Score=156.40 Aligned_cols=136 Identities=22% Similarity=0.169 Sum_probs=121.1
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
.+...++.+.++.++..+......+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 33344666666666666666666778899999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
++.|++++.++..|.||||+|+..|+.+++++|+++|++++ +..|+|||++|+..+
T Consensus 159 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 159 LFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHH
T ss_pred HhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhH
Confidence 99999999999999999999999999999999999999976 778999999998654
No 49
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=8.6e-26 Score=151.73 Aligned_cols=140 Identities=14% Similarity=0.198 Sum_probs=121.8
Q ss_pred eeeeeeccCCCCcCCCCCCCcC-CCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHH
Q 031235 23 MRFSFGRQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (163)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 101 (163)
..+.++..++.+.++.++..+. .....+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++
T Consensus 8 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 87 (201)
T 3hra_A 8 ALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEI 87 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 3444555677777766666554 455567789999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-hcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCC--CCCCCceeeeeccCCC
Q 031235 102 VKLLL-SKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG-AKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 102 ~~~ll-~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g-~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++ +..|+||||+|+..|+
T Consensus 88 ~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 88 LAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp HHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSC
T ss_pred HHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhcc
Confidence 99999 567899999999999999999999999999999999 7765 7788999999998764
No 50
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.92 E-value=1.1e-24 Score=152.94 Aligned_cols=117 Identities=28% Similarity=0.256 Sum_probs=96.9
Q ss_pred CCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q 031235 45 LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLD-GRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 123 (163)
Q Consensus 45 ~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 123 (163)
.....+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..++.+++++|++.|++++.++..|.|||
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHH
Confidence 34556778999999999999999999999999999988854 99999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
|+|+..|+.+++++|+++|++++ +..|.|||++|....
T Consensus 230 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 230 GSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHTSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred HHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 99999999999999999999987 778889999998643
No 51
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=7.2e-26 Score=158.20 Aligned_cols=137 Identities=22% Similarity=0.117 Sum_probs=121.7
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 104 (163)
..++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..++.+++++
T Consensus 41 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~ 119 (261)
T 2xai_A 41 HEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNS 119 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHH
Confidence 344445777777777777766777788899999999999999999999999999875 5569999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCceeeeeccCCC
Q 031235 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP-NGILHIFFHFRKPRGH 162 (163)
Q Consensus 105 ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~-~~~~~t~l~~A~~~g~ 162 (163)
|++.|++++..+..|.||||+|+..|+.+++++|++.|++++ +..|+||||+|+..|+
T Consensus 120 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~ 178 (261)
T 2xai_A 120 LIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTAS 178 (261)
T ss_dssp HHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTC
T ss_pred HHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCC
Confidence 999999999999999999999999999999999999999987 6678899999998775
No 52
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.92 E-value=5.4e-26 Score=159.71 Aligned_cols=138 Identities=16% Similarity=0.077 Sum_probs=105.5
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCC--------------------------
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGID-------------------------- 78 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~-------------------------- 78 (163)
..++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.+++
T Consensus 50 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (282)
T 1oy3_D 50 HLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129 (282)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhh
Confidence 333344666666666666655666667788888888888888888888876644
Q ss_pred ---------------------CcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHcCCHHHHH
Q 031235 79 ---------------------VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDR-WGSTAAADAKYYGNVEVYN 136 (163)
Q Consensus 79 ---------------------~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~t~l~~a~~~g~~~~~~ 136 (163)
++..+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~ 209 (282)
T 1oy3_D 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLE 209 (282)
T ss_dssp --------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred hccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHH
Confidence 455667788888888888888888888888888888764 4888888888888888888
Q ss_pred HHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 137 ILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 137 ~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+|+++|++++ +..|+||||+|+..|+
T Consensus 210 ~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 210 LLLKAGADPTARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHTSSC
T ss_pred HHHHcCCCCcccccCCCCHHHHHHHcCC
Confidence 8888888876 6677888888888775
No 53
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=2.4e-25 Score=154.38 Aligned_cols=110 Identities=29% Similarity=0.295 Sum_probs=103.6
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHH
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADAKY 128 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~a~~ 128 (163)
+..|.||||+|+..|+.++++.|++ |++++.++..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 3468999999999999999999999 99999999999999999999999999999999999999988 889999999999
Q ss_pred cCCHHHHHHHHHcCCCCC--CCCCCceeeeeccC
Q 031235 129 YGNVEVYNILKARGAKVP--NGILHIFFHFRKPR 160 (163)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~ 160 (163)
.|+.+++++|+++|++++ +..|+||||+|+..
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREI 154 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Confidence 999999999999999986 77889999999853
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=3e-26 Score=161.50 Aligned_cols=141 Identities=21% Similarity=0.197 Sum_probs=117.2
Q ss_pred ceeeeeeccCCCCcCCCCCCCcC-CCCCCCCCchHHHHHHH-----HcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHh
Q 031235 22 NMRFSFGRQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMA-----CSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAAC 95 (163)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~-----~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~ 95 (163)
.+...++..++.+.++.++..+. .....+..|.||||+|+ ..++.++++.|++.|...+..+..|.||||+|+.
T Consensus 113 T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~ 192 (276)
T 4hbd_A 113 TALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVS 192 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 33344444566666666666654 55566677888888887 5577788888888887777778889999999999
Q ss_pred cCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCC--CCCCCceeeeeccCCC
Q 031235 96 EGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKA-RGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 96 ~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~-~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++ .|++++ +..|+||||+|+..|+
T Consensus 193 ~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 193 HGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999 899977 7888999999999876
No 55
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=5.8e-26 Score=151.51 Aligned_cols=137 Identities=17% Similarity=0.097 Sum_probs=113.0
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCChHHHHHHhcCc--
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDV----KGVEDLLNEGIDVNSIDLDGRTALHIAACEGH-- 98 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~-- 98 (163)
+.+++.++.+.+..+...+. ....+..|.||||+|+..++. +++++|++.|++++.++..|+||||+|+..++
T Consensus 11 ~~Aa~~g~~~~~~~l~~~~~-~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~ 89 (186)
T 3t8k_A 11 SAAAMLGTYEDFLELFEKGY-EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGND 89 (186)
T ss_dssp HHHHHHSCHHHHHHHHHHSS-SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTC
T ss_pred HHHHHcCCHHHHHHHHhcCc-ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcc
Confidence 34445565555544433332 222235699999999999875 48999999999999999999999999999887
Q ss_pred ----HHHHHHHHhcCCCCCCCCCCCC-cHHHHHHHcC-----CHHHHHHHHH-cCCCCC--CCCCCceeeeeccCCC
Q 031235 99 ----VEVVKLLLSKKANIDARDRWGS-TAAADAKYYG-----NVEVYNILKA-RGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 99 ----~~~~~~ll~~~~~~~~~~~~~~-t~l~~a~~~g-----~~~~~~~Ll~-~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|++.|++++.+|..|. ||||+|+..+ +.+++++|++ +|++++ +..|+||||+|+..|+
T Consensus 90 ~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~ 166 (186)
T 3t8k_A 90 ITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQK 166 (186)
T ss_dssp HHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTC
T ss_pred hhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCC
Confidence 5789999999999999999999 9999999954 4569999999 999987 7889999999999886
No 56
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=2.1e-26 Score=158.30 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=121.2
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 104 (163)
..++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++
T Consensus 26 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~ 105 (229)
T 2vge_A 26 LDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMA 105 (229)
T ss_dssp HHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 33455677777777777666666778889999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCC-CCCCcHHHHH--HHcCCHHHHHHHHHcCCCCC----------------------------------C
Q 031235 105 LLSKKANIDARD-RWGSTAAADA--KYYGNVEVYNILKARGAKVP----------------------------------N 147 (163)
Q Consensus 105 ll~~~~~~~~~~-~~~~t~l~~a--~~~g~~~~~~~Ll~~g~~~~----------------------------------~ 147 (163)
|++.|++++..+ ..|.||||+| +..|+.+++++|+++|++++ +
T Consensus 106 Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d 185 (229)
T 2vge_A 106 LVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRD 185 (229)
T ss_dssp HHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESS
T ss_pred HHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccC
Confidence 999999999986 6999999999 99999999999999765431 4
Q ss_pred CCCCceeeeeccCCC
Q 031235 148 GILHIFFHFRKPRGH 162 (163)
Q Consensus 148 ~~~~t~l~~A~~~g~ 162 (163)
..|+||||+|+..|+
T Consensus 186 ~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 186 GPEETDWWWAALHGQ 200 (229)
T ss_dssp CTTCSSEEEEEETTE
T ss_pred CCcccHHHHHHHcCC
Confidence 457899999999886
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=3.1e-26 Score=162.09 Aligned_cols=136 Identities=22% Similarity=0.190 Sum_probs=104.0
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 104 (163)
..++..++.+.++.++..+...... +|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++
T Consensus 36 ~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~ 113 (285)
T 3kea_A 36 YYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKL 113 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 3334446666665555544333222 47888888888888888888888888888888888888888888888888888
Q ss_pred HHhcCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCceeeeeccCCC
Q 031235 105 LLSKKANIDARDRWG-STAAADAKYYGNVEVYNILKARGAKVPNG-ILHIFFHFRKPRGH 162 (163)
Q Consensus 105 ll~~~~~~~~~~~~~-~t~l~~a~~~g~~~~~~~Ll~~g~~~~~~-~~~t~l~~A~~~g~ 162 (163)
|++.|++++..+..| .||||+|+..|+.+++++|+++|++..+. .|+||||+|+..|+
T Consensus 114 Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~ 173 (285)
T 3kea_A 114 FVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGH 173 (285)
T ss_dssp HHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTC
T ss_pred HHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcCh
Confidence 888888888888888 68888888888888888888888877644 67788888887775
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=3e-25 Score=155.84 Aligned_cols=114 Identities=25% Similarity=0.314 Sum_probs=106.9
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC--------------CCChHHHHHHhcCcHHHHHHHHh---cCCC
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDL--------------DGRTALHIAACEGHVEVVKLLLS---KKAN 111 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~--------------~g~t~l~~a~~~~~~~~~~~ll~---~~~~ 111 (163)
.+..|.||||+|+..|+.+++++|++.|++++.++. .|.||||+|+..|+.+++++|++ .|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 456799999999999999999999999999998886 79999999999999999999999 9999
Q ss_pred CCCCCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCC---------CCCCCCceeeeeccCCC
Q 031235 112 IDARDRWGSTAAADAKYYGN---------VEVYNILKARGAKV---------PNGILHIFFHFRKPRGH 162 (163)
Q Consensus 112 ~~~~~~~~~t~l~~a~~~g~---------~~~~~~Ll~~g~~~---------~~~~~~t~l~~A~~~g~ 162 (163)
++.++..|+||||+|+..|+ .+++++|+++|+++ .+..|+||||+|+..|+
T Consensus 177 ~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 99999999999999999988 89999999999986 47789999999999887
No 59
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=1.7e-25 Score=166.38 Aligned_cols=133 Identities=21% Similarity=0.277 Sum_probs=113.6
Q ss_pred cCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcC
Q 031235 30 QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK 109 (163)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 109 (163)
.+..+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|
T Consensus 255 ~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 334 (437)
T 1n11_A 255 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 334 (437)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred CCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC
Confidence 45555555555555555566777889999999999999999999999998888889999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 110 ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 110 ~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++++.++..|.||||+|+..|+.+++++|+++|++++ +.+|.|||++|+..|+
T Consensus 335 ad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 335 ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTC
T ss_pred CCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCc
Confidence 9999999999999999999999999999999999877 7788899999988876
No 60
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=1.4e-24 Score=140.29 Aligned_cols=109 Identities=27% Similarity=0.334 Sum_probs=102.7
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCH
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNV 132 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~ 132 (163)
..++|+.|+..|+.+++++|++.|.+++ .+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 5689999999999999999999998876 488899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 133 EVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 133 ~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+++++|+++|++++ +..|+||||+|+..|+
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 112 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNH 112 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 99999999999987 6778999999999886
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=5.4e-25 Score=143.19 Aligned_cols=110 Identities=29% Similarity=0.363 Sum_probs=104.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
...++||.|+..|+.+++++|++.|++++..+..|.||||+|+. ++.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 46789999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 132 VEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 132 ~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 115 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH 115 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 999999999999977 7788999999999886
No 62
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=4.1e-26 Score=166.18 Aligned_cols=114 Identities=14% Similarity=0.095 Sum_probs=102.7
Q ss_pred CCCCchHHHHHHHHcC--CHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCC-----CCCCCCCCCc
Q 031235 49 ENLDSTMQLLFMACSG--DVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN-----IDARDRWGST 121 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~-----~~~~~~~~~t 121 (163)
.+..|.||||+|+..| +.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 5556889999999999 89999999999999999999999999999999999999999998888 8888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 122 AAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 122 ~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~ 256 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAM 256 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCh
Confidence 9999999999999999999999877 7778899999998886
No 63
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=3.5e-25 Score=152.24 Aligned_cols=139 Identities=27% Similarity=0.300 Sum_probs=119.3
Q ss_pred eeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCChHHHHHHhcCcHHHH
Q 031235 24 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEG-IDVNSIDLDGRTALHIAACEGHVEVV 102 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~ 102 (163)
...+...++.+.++.++..+......+..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++
T Consensus 48 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 127 (237)
T 3b7b_A 48 LMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLV 127 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHH
Confidence 33444456666666666666666667788999999999999999999999988 78888888999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 103 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 103 ~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++ +..|+||||+|+..|+
T Consensus 128 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 189 (237)
T 3b7b_A 128 KLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENR 189 (237)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999877 6678899999998876
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.92 E-value=8.9e-25 Score=143.62 Aligned_cols=110 Identities=21% Similarity=0.245 Sum_probs=102.9
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGID-VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
+.+|||+|+..|+.+.++.|++.+.. ++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 56899999999999999999999876 78889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 132 VEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 132 ~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 114 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNH 114 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 999999999999987 6788999999999886
No 65
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.92 E-value=2.4e-25 Score=157.49 Aligned_cols=134 Identities=22% Similarity=0.178 Sum_probs=86.5
Q ss_pred eccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHh
Q 031235 28 GRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS 107 (163)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 107 (163)
+..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++
T Consensus 67 a~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 146 (285)
T 3d9h_A 67 AIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQ 146 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHH
Confidence 33455555555555554455556667777777777777777777777777777777777777777777777777777776
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 108 KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 108 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|++++..+ .|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 147 ~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 147 HGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp TTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred CCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 666665432 36666666666666666666666666654 4455566666666554
No 66
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=1.7e-24 Score=141.37 Aligned_cols=114 Identities=32% Similarity=0.380 Sum_probs=104.6
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
.+..+.++||.|+..|+.++++.|++. +.+++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 356789999999999999999999985 4567777888999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 128 YYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 128 ~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 120 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK 120 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999987 6778899999999886
No 67
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=2.3e-24 Score=155.23 Aligned_cols=123 Identities=19% Similarity=0.101 Sum_probs=97.8
Q ss_pred CCCCcCCCCC-CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCc-------------------
Q 031235 39 SPVQDELTVP-ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGH------------------- 98 (163)
Q Consensus 39 ~~~~~~~~~~-~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~------------------- 98 (163)
++..+..... .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 116 l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~ 195 (327)
T 1sw6_A 116 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195 (327)
T ss_dssp CTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG
T ss_pred HHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc
Confidence 3334444444 67889999999999999999999999999999989889999998888655
Q ss_pred ----------------------HHHHHHHHhcCC---------------------------------------------C
Q 031235 99 ----------------------VEVVKLLLSKKA---------------------------------------------N 111 (163)
Q Consensus 99 ----------------------~~~~~~ll~~~~---------------------------------------------~ 111 (163)
.+++++|++.+. +
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~ 275 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM 275 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhC
Confidence 233444443321 4
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 112 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 112 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
++.++..|+||||+|+..|+.+++++|+++|++++ +..|+||||+|+.+|
T Consensus 276 ~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 276 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 67778889999999999999999999999999977 778899999999876
No 68
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=1.9e-24 Score=142.98 Aligned_cols=112 Identities=23% Similarity=0.245 Sum_probs=102.8
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 031235 51 LDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 129 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~ 129 (163)
.++.++|+.|+..|+.++++.|++. +.+++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3577899999999999999999998 567888999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 130 GNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 130 g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 117 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQ 117 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 99999999999999987 7788999999999886
No 69
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=2e-25 Score=155.31 Aligned_cols=133 Identities=18% Similarity=0.141 Sum_probs=111.5
Q ss_pred eeccCCCCcCCCCCC----CcCCCCC----CCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCcc-----------cCC
Q 031235 27 FGRQSSLDPIRRSPV----QDELTVP----ENLDSTMQLLFMACS---GDVKGVEDLLNEGIDVNS-----------IDL 84 (163)
Q Consensus 27 ~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~-----------~~~ 84 (163)
++..++.+.++.+.. .+..... .+..|.||||+|+.. |+.+++++|++.|++++. .+.
T Consensus 9 A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~ 88 (256)
T 2etb_A 9 VVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFY 88 (256)
T ss_dssp HHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTT
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccc
Confidence 334456655544333 2333333 578899999999999 999999999998876553 236
Q ss_pred CCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCC--
Q 031235 85 DGRTALHIAACEGHVEVVKLLLSKKANIDARDRW-------------GSTAAADAKYYGNVEVYNILKA---RGAKVP-- 146 (163)
Q Consensus 85 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-------------~~t~l~~a~~~g~~~~~~~Ll~---~g~~~~-- 146 (163)
.|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|++ .|++++
T Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~ 168 (256)
T 2etb_A 89 QGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEAT 168 (256)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCcc
Confidence 7999999999999999999999999999999876 9999999999999999999999 999987
Q ss_pred CCCCCceeeeecc
Q 031235 147 NGILHIFFHFRKP 159 (163)
Q Consensus 147 ~~~~~t~l~~A~~ 159 (163)
+..|+||||+|+.
T Consensus 169 d~~g~TpLh~A~~ 181 (256)
T 2etb_A 169 DSLGNTVLHALVM 181 (256)
T ss_dssp CTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHH
Confidence 7789999999997
No 70
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=2.4e-25 Score=156.34 Aligned_cols=142 Identities=18% Similarity=0.189 Sum_probs=118.3
Q ss_pred CceeeeeeccCCCCcCCCCCCC----cCCCC----CCCCCchHHHHHHHHc---CCHHHHHHHHHcCCCC-------c--
Q 031235 21 NNMRFSFGRQSSLDPIRRSPVQ----DELTV----PENLDSTMQLLFMACS---GDVKGVEDLLNEGIDV-------N-- 80 (163)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~-------~-- 80 (163)
....+.++..++.+.++.++.. +.... ..+..|.||||+|+.. |+.+++++|++.|++. +
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~ 93 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNAS 93 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCC
T ss_pred chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcc
Confidence 3455666677888888776652 11111 3467899999999986 9999999999987542 2
Q ss_pred --ccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCC--------------CCCcHHHHHHHcCCHHHHHHHHH---c
Q 031235 81 --SIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDR--------------WGSTAAADAKYYGNVEVYNILKA---R 141 (163)
Q Consensus 81 --~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~--------------~~~t~l~~a~~~g~~~~~~~Ll~---~ 141 (163)
..+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|++ .
T Consensus 94 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 173 (273)
T 2pnn_A 94 YTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ 173 (273)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred cccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC
Confidence 2466899999999999999999999999999999887 79999999999999999999999 8
Q ss_pred CCCCC--CCCCCceeeeeccCCC
Q 031235 142 GAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 142 g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|++++ +..|+||||+|+..|+
T Consensus 174 gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 174 PADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCC
T ss_pred CCCceeeCCCCCcHHHHHHHccC
Confidence 99987 7788999999998664
No 71
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.91 E-value=5.4e-25 Score=151.49 Aligned_cols=137 Identities=22% Similarity=0.199 Sum_probs=108.6
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCChHHHHHHhcCcHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGI----DVNSIDLDGRTALHIAACEGHVEV 101 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~----~~~~~~~~g~t~l~~a~~~~~~~~ 101 (163)
.+...++.+.++.++..+......+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..++.++
T Consensus 52 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 131 (241)
T 1k1a_A 52 LAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 131 (241)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHH
Confidence 3344466666666665665556667778888888888888888888888776 677777888888888888888888
Q ss_pred HHHHHhcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 102 VKLLLSKKANIDARD-RWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 102 ~~~ll~~~~~~~~~~-~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 132 ~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 195 (241)
T 1k1a_A 132 VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL 195 (241)
T ss_dssp HHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTC
T ss_pred HHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 888888888888877 778888888888888888888888888876 6677888888887765
No 72
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=7.1e-26 Score=146.90 Aligned_cols=114 Identities=25% Similarity=0.286 Sum_probs=105.3
Q ss_pred CCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCc-HHHHH
Q 031235 48 PENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGST-AAADA 126 (163)
Q Consensus 48 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t-~l~~a 126 (163)
..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+ .++.+++++|++.|++++.++..|.| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 34556899999999999999999999999999999999999999985 89999999999999999999999999 99999
Q ss_pred HHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 127 KYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 123 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH 123 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCH
Confidence 99999999999999999987 6788999999998776
No 73
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.91 E-value=3.1e-24 Score=152.18 Aligned_cols=113 Identities=30% Similarity=0.399 Sum_probs=106.8
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 128 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 128 (163)
.+..+.|+||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 129 YGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
.|+.+++++|+++|++++ +..|.||||+|+..|
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 150 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA 150 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcc
Confidence 999999999999999977 778899999998754
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.91 E-value=3.2e-24 Score=138.78 Aligned_cols=109 Identities=27% Similarity=0.371 Sum_probs=102.5
Q ss_pred chHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC
Q 031235 53 STMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 131 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~ 131 (163)
+.++||.|+..|+.+.++.|++. +.+++..+..|.||||+ +..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 67899999999999999999998 34888889999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 132 VEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 132 ~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 113 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGH 113 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhCh
Confidence 999999999999977 6788999999998876
No 75
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=1.6e-24 Score=133.64 Aligned_cols=105 Identities=39% Similarity=0.501 Sum_probs=97.7
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 128 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 128 (163)
.+..|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.|||++|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 46679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCC--CCCCCce
Q 031235 129 YGNVEVYNILKARGAKVP--NGILHIF 153 (163)
Q Consensus 129 ~g~~~~~~~Ll~~g~~~~--~~~~~t~ 153 (163)
.|+.+++++|+++|++++ +..+.+|
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred CCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 999999999999999987 5566655
No 76
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=2.6e-25 Score=154.96 Aligned_cols=139 Identities=19% Similarity=0.169 Sum_probs=113.8
Q ss_pred eeeeeccCCCCcCCCCCC----CcCCCCCC----CCCchHHHHHHH---HcCCHHHHHHHHHcCCC-----------Ccc
Q 031235 24 RFSFGRQSSLDPIRRSPV----QDELTVPE----NLDSTMQLLFMA---CSGDVKGVEDLLNEGID-----------VNS 81 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~l~~a~---~~g~~~~~~~ll~~~~~-----------~~~ 81 (163)
.+.+++.++.+.++.++. .+...... +..|.||||+|+ ..|+.+++++|++.|++ ++.
T Consensus 9 L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~ 88 (260)
T 3jxi_A 9 LFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRD 88 (260)
T ss_dssp HHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCC
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccc
Confidence 344555677777666555 33333322 256999999999 67999999999998743 344
Q ss_pred cCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHH---cCCC
Q 031235 82 IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD--------------RWGSTAAADAKYYGNVEVYNILKA---RGAK 144 (163)
Q Consensus 82 ~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~--------------~~~~t~l~~a~~~g~~~~~~~Ll~---~g~~ 144 (163)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++ .|++
T Consensus 89 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~ 168 (260)
T 3jxi_A 89 VYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD 168 (260)
T ss_dssp SSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 45589999999999999999999999999999998 689999999999999999999999 8999
Q ss_pred CC--CCCCCceeeeeccCCC
Q 031235 145 VP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 145 ~~--~~~~~t~l~~A~~~g~ 162 (163)
++ +..|+||||+|+..|+
T Consensus 169 ~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 169 LRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp TTCCCTTSCCHHHHHHHHCC
T ss_pred CcccCCCCCcHHHHHHHhcc
Confidence 87 7789999999996543
No 77
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=1.1e-24 Score=154.05 Aligned_cols=115 Identities=21% Similarity=0.183 Sum_probs=106.9
Q ss_pred CCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 031235 46 TVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 125 (163)
Q Consensus 46 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 125 (163)
....+..|.||||+|+..|+.+++++|++.|++++.. .|.||||+|+..|+.+++++|++.|++++..+..|.||||+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY 101 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence 3466778999999999999999999999999998876 48999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCC--CCCC-CceeeeeccCCC
Q 031235 126 AKYYGNVEVYNILKARGAKVP--NGIL-HIFFHFRKPRGH 162 (163)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~--~~~~-~t~l~~A~~~g~ 162 (163)
|+..|+.+++++|+++|++++ +..| .||||+|+..|+
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~ 141 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 141 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC
Confidence 999999999999999999977 6667 799999999886
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2.1e-25 Score=141.53 Aligned_cols=122 Identities=20% Similarity=0.206 Sum_probs=109.2
Q ss_pred ceeeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CChHHHHHHhcCcHH
Q 031235 22 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLD-GRTALHIAACEGHVE 100 (163)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-g~t~l~~a~~~~~~~ 100 (163)
.....++..++.+.++.++..+......+..|.||||+|+. ++.+++++|+++|++++.++.. |.||||+|+..++.+
T Consensus 14 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~ 92 (136)
T 1d9s_A 14 AGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD 92 (136)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 34444555677777777776666666777889999999999 9999999999999999999999 999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 031235 101 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 144 (163)
Q Consensus 101 ~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~ 144 (163)
++++|++.|++++.++..|.||||+|+..++.+++++|+++|++
T Consensus 93 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 93 TLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999985
No 79
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=1.7e-24 Score=151.92 Aligned_cols=134 Identities=26% Similarity=0.258 Sum_probs=115.9
Q ss_pred ccCCCCcCCCCCCCcCCCCCC-CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHh
Q 031235 29 RQSSLDPIRRSPVQDELTVPE-NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS 107 (163)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 107 (163)
..++.+.++.++..+...... +..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++
T Consensus 14 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (285)
T 1wdy_A 14 QNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLS 93 (285)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 345555555555444333333 6778999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC------------CCCCCceeeeeccCCC
Q 031235 108 KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP------------NGILHIFFHFRKPRGH 162 (163)
Q Consensus 108 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~------------~~~~~t~l~~A~~~g~ 162 (163)
.|++++..+..|.||||+|+..|+.+++++|++.|++++ +..|.||||+|+..|+
T Consensus 94 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 160 (285)
T 1wdy_A 94 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 160 (285)
T ss_dssp TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTC
T ss_pred cCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCC
Confidence 999999999999999999999999999999999999976 4567899999998776
No 80
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.91 E-value=9.6e-25 Score=158.94 Aligned_cols=112 Identities=20% Similarity=0.203 Sum_probs=93.8
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHc----CCCCcc-----------------cCCCCChHHHHHHhcC--cHHHHHHHHh
Q 031235 51 LDSTMQLLFMACSGDVKGVEDLLNE----GIDVNS-----------------IDLDGRTALHIAACEG--HVEVVKLLLS 107 (163)
Q Consensus 51 ~~~~~~l~~a~~~g~~~~~~~ll~~----~~~~~~-----------------~~~~g~t~l~~a~~~~--~~~~~~~ll~ 107 (163)
..|.||||+|+..|+.+++++|++. +.+++. .+..|.||||+|+..| +.+++++|++
T Consensus 82 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~ 161 (364)
T 3ljn_A 82 WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161 (364)
T ss_dssp BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH
Confidence 3566666666666666666666665 555444 6778999999999999 9999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CC--CCCCCceeeeeccCCC
Q 031235 108 KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK-----VP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 108 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~-----~~--~~~~~t~l~~A~~~g~ 162 (163)
.|++++..+..|.||||+|+..|+.+++++|+++|++ ++ +..|+||||+|+..|+
T Consensus 162 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~ 223 (364)
T 3ljn_A 162 LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW 223 (364)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC
Confidence 9999999999999999999999999999999999988 55 6788899999999886
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.1e-24 Score=138.18 Aligned_cols=119 Identities=29% Similarity=0.386 Sum_probs=106.6
Q ss_pred eeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHH
Q 031235 24 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 103 (163)
...++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.++++
T Consensus 18 l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~ 97 (136)
T 2jab_A 18 LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAE 97 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 34445557777777766666666667788999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG 142 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g 142 (163)
+|++.|++++..+..|.|||++|+..|+.+++++|+++|
T Consensus 98 ~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 98 VLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999886
No 82
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=3.6e-24 Score=150.89 Aligned_cols=117 Identities=21% Similarity=0.209 Sum_probs=108.7
Q ss_pred CCCCCCCchHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCChHHHHHH-----hcCcHHHHHHHHhcCCCCCCCCCCC
Q 031235 46 TVPENLDSTMQLLFMACSGDVKGVEDLLNEGI-DVNSIDLDGRTALHIAA-----CEGHVEVVKLLLSKKANIDARDRWG 119 (163)
Q Consensus 46 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~ 119 (163)
....+..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+ ..++.+++++|++.|...+..+..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 34567789999999999999999999999998 89999999999999999 6688999999999999999889999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 120 STAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 120 ~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 999999999999999999999999987 7789999999999876
No 83
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=1.1e-24 Score=162.02 Aligned_cols=131 Identities=26% Similarity=0.231 Sum_probs=61.4
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCC
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 110 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 110 (163)
++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|+
T Consensus 25 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 104 (437)
T 1n11_A 25 GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNA 104 (437)
T ss_dssp TCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCC
Confidence 44444433333333333334444455555555555555555555555544444445555555555555555555555555
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCC
Q 031235 111 NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRG 161 (163)
Q Consensus 111 ~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g 161 (163)
+++..+..|.||||+|+..|+.+++++|++.+++.. +..|.||||+|+..|
T Consensus 105 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g 157 (437)
T 1n11_A 105 NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYG 157 (437)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT
T ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcC
Confidence 444444444444444444444444444444444432 333444444444443
No 84
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=1.6e-23 Score=152.77 Aligned_cols=114 Identities=20% Similarity=0.233 Sum_probs=105.0
Q ss_pred CCCCchHHHHHHHHc-CCHHHHHHHHHcCCCCcccC--CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 031235 49 ENLDSTMQLLFMACS-GDVKGVEDLLNEGIDVNSID--LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 125 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~-g~~~~~~~ll~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 125 (163)
....+.++||.|+.. ++.++++.|++.|++++..+ ..|.||||+|+..++.+++++|++.|++++..|..|.||||+
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH 274 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 344577899999998 99999999999999999888 889999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 126 AKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|+..|+.+++++|+++|++++ +..|.||||+|+..|+
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~ 313 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCC
Confidence 999999999999999999987 7788999999998876
No 85
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.90 E-value=9e-24 Score=152.33 Aligned_cols=137 Identities=26% Similarity=0.256 Sum_probs=121.2
Q ss_pred eeeeeeccCCCCcCCCCCCC-cCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHH
Q 031235 23 MRFSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEV 101 (163)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 101 (163)
..+.+++.++.+.++.++.. +......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.++
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~i 106 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEV 106 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred hHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHH
Confidence 34556667777777666655 34445567789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeecc
Q 031235 102 VKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKP 159 (163)
Q Consensus 102 ~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~ 159 (163)
+++|++.|++++..+..|.||||+|+..|+.+++++|+++|+++. +..+.+|+++|+.
T Consensus 107 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 107 TELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPT 166 (351)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSS
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhh
Confidence 999999999999999999999999999999999999999999976 6778899998865
No 86
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.90 E-value=4.8e-24 Score=146.33 Aligned_cols=135 Identities=18% Similarity=0.156 Sum_probs=80.6
Q ss_pred eeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcHHHHHH
Q 031235 26 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ 104 (163)
.+...++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|.+++... ..|.||||+|+..++.+++++
T Consensus 15 ~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~ 94 (240)
T 3eu9_A 15 KATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQ 94 (240)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHH
Confidence 3334455555555444444444455556666666666666666666666666554333 336666666666666666666
Q ss_pred HHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccC
Q 031235 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPR 160 (163)
Q Consensus 105 ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~ 160 (163)
|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|.||||+|+..
T Consensus 95 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 95 LMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Confidence 666666666666666666666666666666666666666654 44555666666643
No 87
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=2.4e-24 Score=157.62 Aligned_cols=134 Identities=25% Similarity=0.272 Sum_probs=113.2
Q ss_pred ccCCCCcCCCCCCCc---CCCCCCCCCchHHHHHHHHcC---CHHHHHHHHHcCCCCcc--------cCCCCChHHHHHH
Q 031235 29 RQSSLDPIRRSPVQD---ELTVPENLDSTMQLLFMACSG---DVKGVEDLLNEGIDVNS--------IDLDGRTALHIAA 94 (163)
Q Consensus 29 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~a~~~g---~~~~~~~ll~~~~~~~~--------~~~~g~t~l~~a~ 94 (163)
..++.+.++.++..+ ......+..|.||||+|+..+ +.+++++|++.|++++. .+..|.||||+|+
T Consensus 208 ~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~ 287 (373)
T 2fo1_E 208 ANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAA 287 (373)
T ss_dssp HTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHH
T ss_pred HCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHH
Confidence 345555555444443 345556778999999999887 88999999999988775 5668999999999
Q ss_pred hcCcHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 95 CEGHVEVVKLLLSKK-ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 95 ~~~~~~~~~~ll~~~-~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
..|+.+++++|++.+ ++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+|||++|+.+|+
T Consensus 288 ~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~ 358 (373)
T 2fo1_E 288 QVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNH 358 (373)
T ss_dssp SSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTC
T ss_pred HhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCC
Confidence 999999999999875 9999999999999999999999999999999999977 7788999999999887
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.1e-23 Score=131.31 Aligned_cols=114 Identities=35% Similarity=0.465 Sum_probs=100.4
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCC
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 110 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 110 (163)
++.+.++.++..+......+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|+
T Consensus 13 ~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 92 (126)
T 1n0r_A 13 GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (126)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 34444444444444444556779999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 031235 111 NIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 144 (163)
Q Consensus 111 ~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~ 144 (163)
+++.++..|.|||++|+..|+.+++++|+++|++
T Consensus 93 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 93 DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999985
No 89
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=2.4e-23 Score=146.08 Aligned_cols=134 Identities=30% Similarity=0.327 Sum_probs=91.9
Q ss_pred ccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc
Q 031235 29 RQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 108 (163)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 108 (163)
..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.
T Consensus 48 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 127 (285)
T 1wdy_A 48 QMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 127 (285)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHh
Confidence 34555555555555555555666777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCCCCC----------CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCC--CCCCCceeeeeccCCC
Q 031235 109 KANIDAR----------DRWGSTAAADAKYYGNVEVYNILKAR-GAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 109 ~~~~~~~----------~~~~~t~l~~a~~~g~~~~~~~Ll~~-g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|++++.. +..|.||||+|+..|+.+++++|++. |++++ +..|+||||+|+..|+
T Consensus 128 g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 194 (285)
T 1wdy_A 128 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD 194 (285)
T ss_dssp TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSC
T ss_pred CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccc
Confidence 7776665 55666777777777777777777765 66655 4556666666666554
No 90
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=1.8e-23 Score=152.97 Aligned_cols=140 Identities=20% Similarity=0.193 Sum_probs=118.5
Q ss_pred eeeeee-ccCCCCcCCCCC--------CCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHH
Q 031235 23 MRFSFG-RQSSLDPIRRSP--------VQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIA 93 (163)
Q Consensus 23 ~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a 93 (163)
.++.++ ..++.+.++.++ ..+......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|
T Consensus 127 t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A 206 (373)
T 2fo1_E 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQA 206 (373)
T ss_dssp CHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHH
Confidence 334433 345555555543 34555566678899999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHhcC---CCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCC----------CCCCCceeeee
Q 031235 94 ACEGHVEVVKLLLSKK---ANIDARDRWGSTAAADAKYYG---NVEVYNILKARGAKVP----------NGILHIFFHFR 157 (163)
Q Consensus 94 ~~~~~~~~~~~ll~~~---~~~~~~~~~~~t~l~~a~~~g---~~~~~~~Ll~~g~~~~----------~~~~~t~l~~A 157 (163)
+..|+.+++++|++.+ ++++..+..|.||||+|+..+ +.+++++|++.|++++ +..|+||||+|
T Consensus 207 ~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A 286 (373)
T 2fo1_E 207 AANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA 286 (373)
T ss_dssp HHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHH
T ss_pred HHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHH
Confidence 9999999999999987 789999999999999999988 8999999999999875 34688999999
Q ss_pred ccCCC
Q 031235 158 KPRGH 162 (163)
Q Consensus 158 ~~~g~ 162 (163)
+..|+
T Consensus 287 ~~~g~ 291 (373)
T 2fo1_E 287 AQVSN 291 (373)
T ss_dssp HSSCC
T ss_pred HHhCC
Confidence 99886
No 91
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=1.4e-24 Score=150.02 Aligned_cols=140 Identities=23% Similarity=0.198 Sum_probs=122.7
Q ss_pred eeeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHH
Q 031235 23 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVV 102 (163)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 102 (163)
..+.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++
T Consensus 40 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v 119 (239)
T 1ycs_B 40 LLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVC 119 (239)
T ss_dssp HHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 34445566888888888877777777788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCC-cHHHHH--HHcCCHHHHHHHHHcCCCCC-----------CCCCCceeeeeccCCC
Q 031235 103 KLLLSKKANIDARDRWGS-TAAADA--KYYGNVEVYNILKARGAKVP-----------NGILHIFFHFRKPRGH 162 (163)
Q Consensus 103 ~~ll~~~~~~~~~~~~~~-t~l~~a--~~~g~~~~~~~Ll~~g~~~~-----------~~~~~t~l~~A~~~g~ 162 (163)
++|++.|++++..+..+. ||||+| +..|+.+++++|++.|++++ +..+.++++++...|+
T Consensus 120 ~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 120 KFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 999999999999988777 999999 78899999999999998865 2345688888887775
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=5.4e-23 Score=155.58 Aligned_cols=97 Identities=24% Similarity=0.244 Sum_probs=58.5
Q ss_pred CCCchHHHHHHHH---cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 031235 50 NLDSTMQLLFMAC---SGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 126 (163)
Q Consensus 50 ~~~~~~~l~~a~~---~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 126 (163)
+..|.||||+|+. .|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 247 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 247 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 4456666666644 5666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHcCCHHHHHHHHHcCCCCC
Q 031235 127 KYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~ 146 (163)
+..|+.+++++|+++|+++.
T Consensus 248 ~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 248 RKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHTTCHHHHHHHHHTCC---
T ss_pred HHcCCHHHHHHHHHhCCCCC
Confidence 66666666666666666654
No 93
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=1.5e-23 Score=158.62 Aligned_cols=110 Identities=20% Similarity=0.291 Sum_probs=103.6
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCccc------CCCCChHHHHHHh---cCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGIDVNSI------DLDGRTALHIAAC---EGHVEVVKLLLSKKANIDARDRWGSTAA 123 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~t~l 123 (163)
..+.||.|+..|+.+.++.|++.|++++.. +..|.||||+|+. .|+.+++++|++.|++++.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 347899999999999999999999998877 7889999999966 8999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 252 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH 252 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 99999999999999999999987 7789999999999886
No 94
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1.2e-22 Score=143.37 Aligned_cols=107 Identities=21% Similarity=0.177 Sum_probs=98.0
Q ss_pred CCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 031235 49 ENLDSTMQLLFMACS---GDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 125 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 125 (163)
.+..|.||||+|+.. |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+
T Consensus 165 ~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244 (278)
T ss_dssp CSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence 356799999999998 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCceeeeeccCC
Q 031235 126 AKYYGNVEVYNILKARGAKVPNGILHIFFHFRKPRG 161 (163)
Q Consensus 126 a~~~g~~~~~~~Ll~~g~~~~~~~~~t~l~~A~~~g 161 (163)
|+..|+.+++++|+++|++. +++|+++..+
T Consensus 245 A~~~~~~~~v~~Ll~~ga~~------~~~~~~v~~~ 274 (278)
T 1dcq_A 245 AKRLKHEHCEELLTQALSGR------FNSHVHVEYE 274 (278)
T ss_dssp HHHTTCHHHHHHHHHHHTTC------CCSSCCCCCC
T ss_pred HHHcCCHHHHHHHHHcCCCC------CCcceeeecc
Confidence 99999999999999998853 4555555543
No 95
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1e-22 Score=143.71 Aligned_cols=110 Identities=23% Similarity=0.243 Sum_probs=102.3
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCC------cccCCCCChHHHHHHhc---CcHHHHHHHHhcCCCCCCCCCCCCcHH
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGIDV------NSIDLDGRTALHIAACE---GHVEVVKLLLSKKANIDARDRWGSTAA 123 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~~~------~~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~t~l 123 (163)
..++|+.|+..|+.+.++.++..|.++ +..+..|.||||+|+.. ++.+++++|++.|++++.+|..|.|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 467899999999999999999999884 44478899999999999 899999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 124 ADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 124 ~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
|+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 250 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH 250 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCC
Confidence 99999999999999999999987 7789999999999886
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=8.5e-23 Score=145.55 Aligned_cols=111 Identities=20% Similarity=0.281 Sum_probs=103.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcc------cCCCCChHHHHHHhc---CcHHHHHHHHhcCCCCCCCCCCCCcH
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDVNS------IDLDGRTALHIAACE---GHVEVVKLLLSKKANIDARDRWGSTA 122 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~t~ 122 (163)
...++|+.|+..|+.+.++.|+..|++++. .+..|.||||+|+.. ++.+++++|++.|++++.+|..|.||
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 356789999999999999999999999887 588999999999997 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 123 AADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 123 l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~ 271 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH 271 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 999999999999999999999987 7789999999998776
No 97
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.89 E-value=4.2e-23 Score=148.83 Aligned_cols=129 Identities=22% Similarity=0.250 Sum_probs=112.5
Q ss_pred CCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHh
Q 031235 31 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACS---GDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLS 107 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 107 (163)
++.+.+..++.........+..|.||||+|+.. +..+++++|++.|++++.++..|.||||+|+..|+.+++++|++
T Consensus 189 ~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 268 (351)
T 3utm_A 189 ADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHK 268 (351)
T ss_dssp TCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 333334444444445555677899999999998 55899999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeecc
Q 031235 108 KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKP 159 (163)
Q Consensus 108 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~ 159 (163)
.|++++.++..|.||||+|+..|+.+++++|+++|++++ +..|+||+++|..
T Consensus 269 ~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 269 HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSCH
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhhH
Confidence 999999999999999999999999999999999999977 7788999998853
No 98
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.88 E-value=2.7e-23 Score=142.62 Aligned_cols=114 Identities=28% Similarity=0.293 Sum_probs=65.8
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCc-HHHHHHHHhcCCCCCCCCC-CCCcHHHHH
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGH-VEVVKLLLSKKANIDARDR-WGSTAAADA 126 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~ll~~~~~~~~~~~-~~~t~l~~a 126 (163)
.+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++ ..++++|+..|++++..+. .|.||||+|
T Consensus 105 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A 184 (240)
T 3eu9_A 105 IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWA 184 (240)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHH
Confidence 33444444444444444444444444444444444444444444443333 3444444445555554443 666777777
Q ss_pred HHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 127 KYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 127 ~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
+..|+.+++++|+++|++++ +..|+|||++|+..|+
T Consensus 185 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 222 (240)
T 3eu9_A 185 VLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN 222 (240)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 77777777777777777765 5667777777777665
No 99
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.87 E-value=2e-21 Score=118.97 Aligned_cols=94 Identities=38% Similarity=0.474 Sum_probs=85.7
Q ss_pred CCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 031235 45 LTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAA 124 (163)
Q Consensus 45 ~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~ 124 (163)
.....+.+|.++||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|++++.++..|.||||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 34456678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHH
Q 031235 125 DAKYYGNVEVYNIL 138 (163)
Q Consensus 125 ~a~~~g~~~~~~~L 138 (163)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999887
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=6.4e-22 Score=144.38 Aligned_cols=130 Identities=22% Similarity=0.262 Sum_probs=101.1
Q ss_pred CCCCcCCCCCCCcCCCCCCC--CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHHHHhc
Q 031235 31 SSLDPIRRSPVQDELTVPEN--LDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 108 (163)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 108 (163)
++.+.+..++..+......+ ..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|++.
T Consensus 211 g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~ 290 (368)
T 3jue_A 211 PSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKR 290 (368)
T ss_dssp CCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 55555555555554444444 7899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-----CCCCCceeeeeccC
Q 031235 109 KANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP-----NGILHIFFHFRKPR 160 (163)
Q Consensus 109 ~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~-----~~~~~t~l~~A~~~ 160 (163)
|++++..|..|.||||+|+..|+.+++++|+..+..-. +..+.|+++++...
T Consensus 291 Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 291 GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999875422 44556888776554
No 101
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.86 E-value=3.1e-22 Score=144.27 Aligned_cols=113 Identities=30% Similarity=0.353 Sum_probs=92.2
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCChHHHHHHhcCcHHHHHHHHhcCCCC----------------
Q 031235 50 NLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDL-DGRTALHIAACEGHVEVVKLLLSKKANI---------------- 112 (163)
Q Consensus 50 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~---------------- 112 (163)
..+|.|+||.|+..|+.++|++|+++|++++.++. .|.||||+|+..|+.+++++|++.|+++
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence 34577888888888888888888888888877764 4788888888888888888888877654
Q ss_pred -----------------CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC------------CCCCCceeeeeccCCC
Q 031235 113 -----------------DARDRWGSTAAADAKYYGNVEVYNILKARGAKVP------------NGILHIFFHFRKPRGH 162 (163)
Q Consensus 113 -----------------~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~------------~~~~~t~l~~A~~~g~ 162 (163)
+..+..|.||+++|+..|+.+++++|+++|++++ +..|.||||+|+..|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 102 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred cccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 4456678999999999999999999999999864 2357899999999886
No 102
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.86 E-value=3.4e-21 Score=138.88 Aligned_cols=63 Identities=22% Similarity=0.270 Sum_probs=57.8
Q ss_pred CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 84 LDGRTALHIAACEGHVEVVKLLLSKKANIDARDR-WGSTAAADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 84 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
..|.|+||.|+..|+.++|++|++.|++++.++. .|+||||+|+..|+.+++++|+++|++++
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~ 86 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 86 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchh
Confidence 3577999999999999999999999999998865 58999999999999999999999998753
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=1e-22 Score=126.93 Aligned_cols=106 Identities=29% Similarity=0.252 Sum_probs=92.4
Q ss_pred eeeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHH
Q 031235 24 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 103 (163)
...+...++.+.++.++..+......+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.++++
T Consensus 11 l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~ 90 (123)
T 3aaa_C 11 FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVK 90 (123)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 33444556666666666666666667778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHc
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYY 129 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~ 129 (163)
+|++.|++++.++..|.||+++|...
T Consensus 91 ~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 91 LLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred HHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 99999999999999999999999443
No 104
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.84 E-value=1.8e-21 Score=129.78 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=94.8
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcH----HHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 031235 53 STMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHV----EVVKLLLSKKANIDARDRWGSTAAADAK 127 (163)
Q Consensus 53 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 127 (163)
+.++|+.|+..|+.+.++.++..+.+ ..+ ..|.||||+|+..++. +++++|++.|++++.++..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 45679999999999999999987643 344 6799999999999975 5899999999999999999999999999
Q ss_pred HcCC------HHHHHHHHHcCCCCC--CCCCC-ceeeeeccCC
Q 031235 128 YYGN------VEVYNILKARGAKVP--NGILH-IFFHFRKPRG 161 (163)
Q Consensus 128 ~~g~------~~~~~~Ll~~g~~~~--~~~~~-t~l~~A~~~g 161 (163)
..++ .+++++|+++|++++ +..|+ ||||+|+..|
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCC
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcC
Confidence 9887 688999999999988 67888 9999999854
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=5.8e-21 Score=113.36 Aligned_cols=78 Identities=41% Similarity=0.580 Sum_probs=73.0
Q ss_pred CCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeeccCCC
Q 031235 85 DGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRKPRGH 162 (163)
Q Consensus 85 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~~~g~ 162 (163)
.|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999987 7788999999999886
No 106
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=4.4e-22 Score=135.79 Aligned_cols=120 Identities=23% Similarity=0.209 Sum_probs=99.4
Q ss_pred eeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHhcCcHHHHHHH
Q 031235 27 FGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNE-GIDVNSIDLDGRTALHIAACEGHVEVVKLL 105 (163)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 105 (163)
++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..|+.+++++|
T Consensus 80 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~L 159 (222)
T 3ehr_A 80 AAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLL 159 (222)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3444666666666666666666778899999999999999999999998 999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 031235 106 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP 146 (163)
Q Consensus 106 l~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~ 146 (163)
++.|++++.++..|.|||++|+..|+.++++.|+..|+...
T Consensus 160 l~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 160 LAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 99999999999999999999999999999999999999865
No 107
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=1.1e-22 Score=128.99 Aligned_cols=120 Identities=21% Similarity=0.160 Sum_probs=101.0
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHhcCcHHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKL 104 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 104 (163)
..++..++.+.++.++..+......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++
T Consensus 15 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 94 (137)
T 3c5r_A 15 HIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKL 94 (137)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 33444566666666666666666677889999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 031235 105 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 144 (163)
Q Consensus 105 ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~ 144 (163)
|++.|++++.++..|.||+++|+..+..+++++|...+..
T Consensus 95 Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 95 LLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 9999999999999999999999999989998877766543
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1.6e-20 Score=130.06 Aligned_cols=119 Identities=29% Similarity=0.313 Sum_probs=102.7
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~ 103 (163)
..++..++.+.++.++. +......+..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.++++
T Consensus 50 ~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~ 128 (244)
T 3ui2_A 50 WTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVE 128 (244)
T ss_dssp HHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 34445567777777666 55566677889999999999999999999999999999888 78999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHH----------------HcCCHHHHHHHHHcCCC
Q 031235 104 LLLSKKANIDARDRWGSTAAADAK----------------YYGNVEVYNILKARGAK 144 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~----------------~~g~~~~~~~Ll~~g~~ 144 (163)
+|++.|++++.++..|.||||+|+ ..|+.+++++|++.+.+
T Consensus 129 ~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 129 ALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 999999999999999999998887 56788899999886443
No 109
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=1e-20 Score=125.56 Aligned_cols=104 Identities=30% Similarity=0.306 Sum_probs=90.9
Q ss_pred eeeeccCCCCcCCCCCCCcCCCCCCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHhcCcHHHHH
Q 031235 25 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACSGDVKGVEDLLNEGIDVNSID-LDGRTALHIAACEGHVEVVK 103 (163)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~ 103 (163)
..++..++.+.++.++. +......+..|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+..++.++++
T Consensus 49 ~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~ 127 (183)
T 3deo_A 49 WTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVE 127 (183)
T ss_dssp HHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHH
Confidence 34444566666666666 55566677889999999999999999999999999999888 88999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcHHHHHHHc
Q 031235 104 LLLSKKANIDARDRWGSTAAADAKYY 129 (163)
Q Consensus 104 ~ll~~~~~~~~~~~~~~t~l~~a~~~ 129 (163)
+|++.|++++.++..|.||||+|+..
T Consensus 128 ~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 128 ALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 99999999999999999999999875
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.82 E-value=8e-23 Score=149.58 Aligned_cols=105 Identities=17% Similarity=0.056 Sum_probs=56.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCC--CCCCCCcHHHHH
Q 031235 52 DSTMQLLFMACSGDVKGVEDLLNEGIDV---NSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDA--RDRWGSTAAADA 126 (163)
Q Consensus 52 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~---~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~--~~~~~~t~l~~a 126 (163)
.+.||||+|+..|+.+++++|+++|+++ +..+.. .||||+|+..|+.+++++|++.|++++. .+..|.||||+|
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~A 205 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWA 205 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHH
Confidence 4555666666666666666666555431 111111 5566666666666666666655555444 444555566666
Q ss_pred H-HcCCHHHHHHHHHcCCCCCCCCCCceeeeeccCCC
Q 031235 127 K-YYGNVEVYNILKARGAKVPNGILHIFFHFRKPRGH 162 (163)
Q Consensus 127 ~-~~g~~~~~~~Ll~~g~~~~~~~~~t~l~~A~~~g~ 162 (163)
+ ..|+.+++++|++.|+ .+.|||++|+.+|+
T Consensus 206 a~~~G~~eiv~~Ll~~ga-----~~~taL~~Aa~~g~ 237 (376)
T 2aja_A 206 AVGRGHHNVINFLLDCPV-----MLAYAEIHEFEYGE 237 (376)
T ss_dssp HSTTCCHHHHHHHTTSHH-----HHHHHHHCTTTTTT
T ss_pred HHHCCCHHHHHHHHhCCC-----ccchHHHHHHHCCC
Confidence 6 5666666666655443 24555666555554
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=1.7e-21 Score=142.54 Aligned_cols=113 Identities=19% Similarity=0.159 Sum_probs=92.2
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCChHHHHHHhcCcHHHHHHHHhcCCCC---CCCCCCCCcH
Q 031235 49 ENLDSTMQLLFMACSGDVKGVEDLLNEGIDV---NSIDLDGRTALHIAACEGHVEVVKLLLSKKANI---DARDRWGSTA 122 (163)
Q Consensus 49 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~---~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~---~~~~~~~~t~ 122 (163)
.+..+.||||+|+..|+.+++++|++.|+.. +..+..|.||||+|+..|+.+++++|++.|+++ +..+.. .||
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 3455779999999999999999999998732 223446789999999999999999999999752 333333 899
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCC----CCCCCceeeeec-cCCC
Q 031235 123 AADAKYYGNVEVYNILKARGAKVP----NGILHIFFHFRK-PRGH 162 (163)
Q Consensus 123 l~~a~~~g~~~~~~~Ll~~g~~~~----~~~~~t~l~~A~-~~g~ 162 (163)
||+|+..|+.+++++|+++|+++. +..|.||||+|+ .+|+
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~ 211 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 211 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCC
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCC
Confidence 999999999999999999999943 456789999999 9987
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=2.2e-19 Score=109.73 Aligned_cols=83 Identities=28% Similarity=0.356 Sum_probs=75.3
Q ss_pred cccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeee
Q 031235 80 NSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFR 157 (163)
Q Consensus 80 ~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A 157 (163)
...+..|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 3457789999999999999999999999999999999999999999999999999999999999987 77889999999
Q ss_pred ccCCC
Q 031235 158 KPRGH 162 (163)
Q Consensus 158 ~~~g~ 162 (163)
+..|+
T Consensus 98 ~~~~~ 102 (110)
T 2zgd_A 98 IDNGN 102 (110)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 98876
No 113
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.77 E-value=5e-20 Score=132.56 Aligned_cols=103 Identities=18% Similarity=0.114 Sum_probs=89.5
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCC---H
Q 031235 57 LLFMACSGDVKGVEDLLNEGIDVNS-IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN---V 132 (163)
Q Consensus 57 l~~a~~~g~~~~~~~ll~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~---~ 132 (163)
+|.++..+..++++.|++.|++++. .+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+ .
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 3556666667788888899999999 89999999999999999999999999999999999999999999999998 6
Q ss_pred HHHHHHHHcC-CCCC--CCCCCceeeeecc
Q 031235 133 EVYNILKARG-AKVP--NGILHIFFHFRKP 159 (163)
Q Consensus 133 ~~~~~Ll~~g-~~~~--~~~~~t~l~~A~~ 159 (163)
++++.|++.+ ++++ +..|+||||+|+.
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~ 210 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIII 210 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHH
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHH
Confidence 7777888876 4454 7889999999997
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=6.1e-19 Score=108.38 Aligned_cols=82 Identities=40% Similarity=0.438 Sum_probs=77.4
Q ss_pred ccCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCceeeeec
Q 031235 81 SIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP--NGILHIFFHFRK 158 (163)
Q Consensus 81 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~g~~~~--~~~~~t~l~~A~ 158 (163)
.+|..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++ +..|+||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999986 677899999999
Q ss_pred cCCC
Q 031235 159 PRGH 162 (163)
Q Consensus 159 ~~g~ 162 (163)
..|+
T Consensus 84 ~~~~ 87 (115)
T 2l6b_A 84 KNGH 87 (115)
T ss_dssp TTTC
T ss_pred HCCC
Confidence 9886
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=71.85 E-value=3.5 Score=19.24 Aligned_cols=19 Identities=32% Similarity=0.286 Sum_probs=15.3
Q ss_pred HHHHHHHHcCCHHHHHHHH
Q 031235 55 MQLLFMACSGDVKGVEDLL 73 (163)
Q Consensus 55 ~~l~~a~~~g~~~~~~~ll 73 (163)
..++.||..|+++.++.|=
T Consensus 15 QqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHH
Confidence 3578899999999988763
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=41.97 E-value=1.1e+02 Score=22.89 Aligned_cols=47 Identities=23% Similarity=0.312 Sum_probs=35.4
Q ss_pred HHcCCHHHHHHHHHcCCCCcccC--------------CCCChHHHHHHhcCcHHHHHHHHh
Q 031235 61 ACSGDVKGVEDLLNEGIDVNSID--------------LDGRTALHIAACEGHVEVVKLLLS 107 (163)
Q Consensus 61 ~~~g~~~~~~~ll~~~~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~ll~ 107 (163)
+..|+...|+..+..|.+++.+- .-|.|.+|.|..+.+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 34799999999999887764321 247788888888888888777775
Done!