Query 031237
Match_columns 163
No_of_seqs 206 out of 1122
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 17:55:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1cfe_A Pathogenesis-related pr 100.0 2.3E-48 7.7E-53 267.4 13.8 133 28-163 2-135 (135)
2 4aiw_A Golgi-associated plant 100.0 1.5E-48 5.2E-53 273.7 12.5 137 25-163 5-145 (154)
3 2ddb_A Pseudecin, channel bloc 100.0 1.8E-41 6E-46 248.7 13.7 132 27-163 3-150 (210)
4 1xta_A Natrin 1; crisp, serine 100.0 4.6E-41 1.6E-45 248.2 13.8 134 25-163 10-161 (221)
5 1qnx_A VES V 5, antigen 5; all 100.0 1E-40 3.5E-45 244.6 11.8 134 26-163 42-206 (209)
6 3q2u_A Glioma pathogenesis-rel 100.0 3.3E-40 1.1E-44 241.3 13.8 135 22-163 11-171 (205)
7 1u53_A Secreted protein Asp-2; 100.0 2.8E-40 9.5E-45 240.1 13.0 134 25-163 12-175 (196)
8 2vzn_A Venom allergen 3; major 100.0 4.8E-40 1.7E-44 242.5 11.2 132 27-163 40-208 (218)
9 3nt8_A Ancylostoma secreted pr 100.0 2.6E-38 8.7E-43 253.4 11.8 134 25-163 32-189 (424)
10 3u3l_C Tablysin 15; CAP domain 100.0 1.2E-37 4E-42 231.8 12.8 132 26-163 37-200 (233)
11 3nt8_A Ancylostoma secreted pr 100.0 2.8E-36 9.7E-41 241.6 13.4 134 25-163 233-399 (424)
12 3s6s_A AC-Asp-7; pathogenesis- 100.0 1.1E-33 3.9E-38 205.3 7.9 115 25-163 14-150 (206)
13 4ifa_A Extracellular protein c 99.7 2.7E-17 9.3E-22 127.4 8.6 94 28-139 219-329 (339)
14 4h0a_A Uncharacterized protein 99.5 9.2E-14 3.1E-18 107.3 9.2 92 29-138 205-312 (323)
15 3plv_C 66 kDa U4/U6.U5 small n 84.5 0.94 3.2E-05 20.0 2.3 17 34-50 4-20 (21)
16 3ukw_C Bimax1 peptide; arm rep 31.1 16 0.00056 16.4 0.7 14 41-54 4-17 (28)
17 2ahm_A Replicase NSP7, replica 25.1 85 0.0029 18.8 3.3 39 4-42 7-46 (88)
No 1
>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1
Probab=100.00 E-value=2.3e-48 Score=267.37 Aligned_cols=133 Identities=49% Similarity=1.004 Sum_probs=124.9
Q ss_pred ccHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhCCCCcccCCCCccceEEeecCCCCHHHHHHHHHhhhccCC
Q 031237 28 RHPDDWLHAHNGIRIQMGLPALAWDDKLADYAKWYANERRGDCRLEHSDTPFGENLAWADYDMKGSEAIQMWIDEVKDYD 107 (163)
Q Consensus 28 ~~~~~iL~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~Gen~~~~~~~~~~~~~v~~W~~e~~~y~ 107 (163)
+.+++||+.||.+|+.++|++|+||++|+..||.||++|+.+|.+.|+++ ||||+++++..++.++|+.|++|..+|+
T Consensus 2 ~~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~--GENla~~~~~~~~~~~v~~W~~E~~~y~ 79 (135)
T 1cfe_A 2 NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPSYN 79 (135)
T ss_dssp CSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSS--SBCCEECSSSCCHHHHHHHHHTTGGGEE
T ss_pred cHHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCCC--CeEEEEecCCCCHHHHHHHHHhHHhhCC
Confidence 57899999999999999999999999999999999999999999999986 9999987655689999999999999999
Q ss_pred CCCCCCCCCCC-cchHhhhHhhhcCeeeEEEEEecCCCEEEEEEeeCCCCCCCCCCC
Q 031237 108 YNSNTCRVPDM-CGHYTQVVWRNTARVGCARVKCHNGNTFFTCNYDPPGNFVGAKPF 163 (163)
Q Consensus 108 ~~~~~~~~~~~-~~~ftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y 163 (163)
|..+.+.. ++ ++|||||||++|++||||++.|.++.+++||+|+|+||+.|++||
T Consensus 80 ~~~~~~~~-~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~VC~Y~p~GN~~g~~pY 135 (135)
T 1cfe_A 80 YATNQCVG-GKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 135 (135)
T ss_dssp GGGTEECS-SSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred CCCCCcCC-CCcccceeeeEEccCcEEeEEEEEeCCCCEEEEEEEeCCCCCCCCCCC
Confidence 99888776 55 999999999999999999999987789999999999999999999
No 2
>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*
Probab=100.00 E-value=1.5e-48 Score=273.70 Aligned_cols=137 Identities=34% Similarity=0.627 Sum_probs=127.3
Q ss_pred cCCccHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhCCCCcccCC----CCccceEEeecCCCCHHHHHHHHH
Q 031237 25 ANARHPDDWLHAHNGIRIQMGLPALAWDDKLADYAKWYANERRGDCRLEHSD----TPFGENLAWADYDMKGSEAIQMWI 100 (163)
Q Consensus 25 ~~~~~~~~iL~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~----~~~Gen~~~~~~~~~~~~~v~~W~ 100 (163)
.+++++++||++||.+|+.|++++|+||++|++.||.||++++.+|.+.|++ +.+||||+++..+.++.++|+.||
T Consensus 5 ~~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~~~~~~~~v~~W~ 84 (154)
T 4aiw_A 5 ASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWY 84 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCCCCCHHHHHHHHH
Confidence 4467899999999999999999999999999999999999999999999985 578999998887778999999999
Q ss_pred hhhccCCCCCCCCCCCCCcchHhhhHhhhcCeeeEEEEEecCCCEEEEEEeeCCCCCCCCCCC
Q 031237 101 DEVKDYDYNSNTCRVPDMCGHYTQVVWRNTARVGCARVKCHNGNTFFTCNYDPPGNFVGAKPF 163 (163)
Q Consensus 101 ~e~~~y~~~~~~~~~~~~~~~ftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y 163 (163)
+|..+|+|.++.+.. .++|||||||++|++||||++.|.++..++||+|+|+||+.|+.||
T Consensus 85 ~E~~~y~~~~~~~~~--~~gHfTQ~VW~~t~~vGCg~a~c~~~~~~vVC~Y~P~GN~~g~~~y 145 (154)
T 4aiw_A 85 SEIKNYNFQQPGFTS--GTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF 145 (154)
T ss_dssp GGGGGCCTTSCSCCT--TTHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred HHhhhcccCCCCcCC--CcCCeeeeehhhhceeeeEEEEcCCCCEEEEEEEeCCCccCCccch
Confidence 999999999988766 4999999999999999999999998889999999999999998776
No 3
>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A
Probab=100.00 E-value=1.8e-41 Score=248.66 Aligned_cols=132 Identities=31% Similarity=0.656 Sum_probs=118.6
Q ss_pred CccHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHHhhCCCCcccCCC--------CccceEEeecCCCCHH
Q 031237 27 ARHPDDWLHAHNGIRIQMG-----LPALAWDDKLADYAKWYANERRGDCRLEHSDT--------PFGENLAWADYDMKGS 93 (163)
Q Consensus 27 ~~~~~~iL~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~--------~~Gen~~~~~~~~~~~ 93 (163)
++++++||+.||.+|+.++ |++|+||++||..||.|| ++|.+.|++. .+||||++++...++.
T Consensus 3 ~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A----~~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~~ 78 (210)
T 2ddb_A 3 KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWA----DRCTFAHSPPNTRTVGKLRCGENIFMSSQPFPWS 78 (210)
T ss_dssp -CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHH----TTTCCSCCCGGGSEETTEECEEEEEEESSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHH----hcCCCCCCCccccccCCCCCcceEEEEcCCCCHH
Confidence 4678999999999999996 679999999999999999 9999999862 3799999887555789
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCC-cchHhhhHhhhcCeeeEEEEEecCCCEEEEEEeeCCCCCCCC--CCC
Q 031237 94 EAIQMWIDEVKDYDYNSNTCRVPDM-CGHYTQVVWRNTARVGCARVKCHNGNTFFTCNYDPPGNFVGA--KPF 163 (163)
Q Consensus 94 ~~v~~W~~e~~~y~~~~~~~~~~~~-~~~ftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~--~~Y 163 (163)
++|+.||+|..+|+|..+.+.. +. ++|||||||+++++||||++.|..+.+++||+|+|+||+.|+ +||
T Consensus 79 ~av~~W~~E~~~y~~~~~~~~~-~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~VC~Y~P~GN~~g~~~~pY 150 (210)
T 2ddb_A 79 GVVQAWYDEIKNFVYGIGAKPP-GSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPY 150 (210)
T ss_dssp HHHHHHHGGGGGEETTTEESST-TSCCHHHHHHTCTTCCEEEEEEEEEETTEEEEEEEEESCSSSTTCTTCSS
T ss_pred HHHHHHHHHhhhCCCCCCCCCC-CCcccchhhhhhhhccEeeEEEEEcCCCCEEEEEEeeCCCCCCCCccCCC
Confidence 9999999999999998766554 45 999999999999999999999987678999999999999999 898
No 4
>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A
Probab=100.00 E-value=4.6e-41 Score=248.21 Aligned_cols=134 Identities=31% Similarity=0.663 Sum_probs=120.0
Q ss_pred cCCccHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHHhhCCCCcccCCC--------CccceEEeecCCCC
Q 031237 25 ANARHPDDWLHAHNGIRIQMG-----LPALAWDDKLADYAKWYANERRGDCRLEHSDT--------PFGENLAWADYDMK 91 (163)
Q Consensus 25 ~~~~~~~~iL~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~--------~~Gen~~~~~~~~~ 91 (163)
..++++++||+.||.+|+.++ |++|+||++||..||.|| ++|.+.|++. .+||||+++....+
T Consensus 10 ~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A----~~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~ 85 (221)
T 1xta_A 10 RRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWA----NTCSLNHSPDNLRVLEGIQCGESIYMSSNART 85 (221)
T ss_dssp TSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHH----TTTCCSCCCGGGCEETTEECEEEEEEESSCCC
T ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHH----hcCCCCCcCccccccCCCCCceEEEeecCCCC
Confidence 445789999999999999996 679999999999999999 9999999862 47999998875557
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCC-cchHhhhHhhhcCeeeEEEEEecCC--CEEEEEEeeCCCCCCCC--CCC
Q 031237 92 GSEAIQMWIDEVKDYDYNSNTCRVPDM-CGHYTQVVWRNTARVGCARVKCHNG--NTFFTCNYDPPGNFVGA--KPF 163 (163)
Q Consensus 92 ~~~~v~~W~~e~~~y~~~~~~~~~~~~-~~~ftq~vw~~t~~vGCa~~~c~~~--~~~~vC~Y~p~gn~~g~--~~Y 163 (163)
+.++|+.||+|..+|+|..+.+.. +. ++|||||||+++++||||++.|..+ .+++||+|+|+||+.|+ +||
T Consensus 86 ~~~av~~W~~E~~~y~~~~~~~~~-~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY 161 (221)
T 1xta_A 86 WTEIIHLWHDEYKNFVYGVGASPP-GSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY 161 (221)
T ss_dssp HHHHHHHHHGGGGGEETTTEESST-TCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCC-CCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence 899999999999999998766544 45 9999999999999999999999874 68999999999999999 898
No 5
>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1
Probab=100.00 E-value=1e-40 Score=244.62 Aligned_cols=134 Identities=34% Similarity=0.666 Sum_probs=114.7
Q ss_pred CCccHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHHhhCCCCcccCCC------Cccce
Q 031237 26 NARHPDDWLHAHNGIRIQMG-----------------LPALAWDDKLADYAKWYANERRGDCRLEHSDT------PFGEN 82 (163)
Q Consensus 26 ~~~~~~~iL~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~------~~Gen 82 (163)
+++++++||+.||.+|++|+ |++|+||++||..||.|| ++|.+.|+.. .+|||
T Consensus 42 ~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A----~~C~~~h~~~~~~~~~~~GeN 117 (209)
T 1qnx_A 42 TKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWA----NQCQYGHDTCRDVAKYQVGQN 117 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHH----TTCCCSCCSCCCCSSSCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHH----hcCcccCCCccCCCCCCCccE
Confidence 34678999999999999973 789999999999999999 9999999851 47999
Q ss_pred EEeecC----CCCHHHHHHHHHhhhccCCCCCCCCCCCCC-cchHhhhHhhhcCeeeEEEEEecCC---CEEEEEEeeCC
Q 031237 83 LAWADY----DMKGSEAIQMWIDEVKDYDYNSNTCRVPDM-CGHYTQVVWRNTARVGCARVKCHNG---NTFFTCNYDPP 154 (163)
Q Consensus 83 ~~~~~~----~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~-~~~ftq~vw~~t~~vGCa~~~c~~~---~~~~vC~Y~p~ 154 (163)
|++... ...+.++|+.||+|..+|+|.+......+. ++|||||||++|++||||++.|..+ ..++||+|+|+
T Consensus 118 l~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P~ 197 (209)
T 1qnx_A 118 VALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPS 197 (209)
T ss_dssp EEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred EEEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCCC
Confidence 998652 246889999999999999998643222123 8999999999999999999999765 36899999999
Q ss_pred CCCCCCCCC
Q 031237 155 GNFVGAKPF 163 (163)
Q Consensus 155 gn~~g~~~Y 163 (163)
||+.|++||
T Consensus 198 GN~~g~~~Y 206 (209)
T 1qnx_A 198 GNFKNEELY 206 (209)
T ss_dssp CCCTTSCSS
T ss_pred CCCCCCCCC
Confidence 999999998
No 6
>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A
Probab=100.00 E-value=3.3e-40 Score=241.28 Aligned_cols=135 Identities=37% Similarity=0.766 Sum_probs=118.4
Q ss_pred hcccCCccHHHHHHHHHHHHhhCC-----CCCCcccHHHHHHHHHHHHHhhCCCCcccCC------------CCccceEE
Q 031237 22 LGMANARHPDDWLHAHNGIRIQMG-----LPALAWDDKLADYAKWYANERRGDCRLEHSD------------TPFGENLA 84 (163)
Q Consensus 22 ~~~~~~~~~~~iL~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~------------~~~Gen~~ 84 (163)
|.....+++++||+.||.+|+.++ |++|+||++||..||.|| ++|.+.|+. +.+|||++
T Consensus 11 p~~~~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A----~~C~~~h~~~~~~~~~~~~~~~~~GeNl~ 86 (205)
T 3q2u_A 11 PDIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWA----SNCQFSHNTRLKPPHKLHPNFTSLGENIW 86 (205)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHH----TTCBSSCCTTSSTTCCSSTTCSSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHH----HhCCCCCCccccccccccCCCCCCceEEE
Confidence 444556789999999999999996 779999999999999999 999998865 25899998
Q ss_pred eec-CCCCHHHHHHHHHhhhccCCCCCCCCCCCCCcchHhhhHhhhcCeeeEEEEEecC--------CCEEEEEEeeCCC
Q 031237 85 WAD-YDMKGSEAIQMWIDEVKDYDYNSNTCRVPDMCGHYTQVVWRNTARVGCARVKCHN--------GNTFFTCNYDPPG 155 (163)
Q Consensus 85 ~~~-~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~vw~~t~~vGCa~~~c~~--------~~~~~vC~Y~p~g 155 (163)
.++ ...++.++|+.|++|..+|+|.++.+.. .++|||||||+++++||||++.|.. ...++||+|+|+|
T Consensus 87 ~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~--~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~G 164 (205)
T 3q2u_A 87 TGSVPIFSVSSAITNWYDEIQDYDFKTRICKK--VCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGG 164 (205)
T ss_dssp EEETTTCCHHHHHHHHHGGGGGEETTTTEESS--CCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCC
T ss_pred EccCCCCCHHHHHHHHHhHHHhcCCCCCCccc--hhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCC
Confidence 876 3467899999999999999998876543 4999999999999999999999975 2578999999999
Q ss_pred CCCCCCCC
Q 031237 156 NFVGAKPF 163 (163)
Q Consensus 156 n~~g~~~Y 163 (163)
|+ +++||
T Consensus 165 N~-~~~pY 171 (205)
T 3q2u_A 165 NY-PTWPY 171 (205)
T ss_dssp CC-SSCSS
T ss_pred Cc-CCCCC
Confidence 99 78888
No 7
>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}
Probab=100.00 E-value=2.8e-40 Score=240.13 Aligned_cols=134 Identities=26% Similarity=0.544 Sum_probs=115.8
Q ss_pred cCCccHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHHhhCCCCcccCC----CCccceE
Q 031237 25 ANARHPDDWLHAHNGIRIQMG-----------------LPALAWDDKLADYAKWYANERRGDCRLEHSD----TPFGENL 83 (163)
Q Consensus 25 ~~~~~~~~iL~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~----~~~Gen~ 83 (163)
.+++++++||+.||.+|++++ |++|+||++||..||.|| ++|.+.|+. ..+|||+
T Consensus 12 lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A----~~C~~~h~~~~~~~~~GeNl 87 (196)
T 1u53_A 12 MSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNA----KQCVFKHSQPNQRKGLGENI 87 (196)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHH----TTCCCCCCCGGGSTTCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHH----HhCccCCCccccCCCCCeEE
Confidence 445679999999999999982 569999999999999999 999999984 3689999
Q ss_pred EeecCCC-----CHHHHHHHHHhhhccCCCCC-CCCCCC--CC-cchHhhhHhhhcCeeeEEEEEecCCCEEEEEEeeCC
Q 031237 84 AWADYDM-----KGSEAIQMWIDEVKDYDYNS-NTCRVP--DM-CGHYTQVVWRNTARVGCARVKCHNGNTFFTCNYDPP 154 (163)
Q Consensus 84 ~~~~~~~-----~~~~~v~~W~~e~~~y~~~~-~~~~~~--~~-~~~ftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~ 154 (163)
++.++.. .+.++|+.||+|..+|+|.. +.+..+ +. ++|||||||+++++||||++.|.. .+++||+|+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~-~~~~VC~Y~p~ 166 (196)
T 1u53_A 88 FMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGPA 166 (196)
T ss_dssp EEESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS-CEEEEEEEESC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC-CEEEEEEeCCC
Confidence 9766322 36899999999999999987 444311 33 999999999999999999999976 89999999999
Q ss_pred CCCCCCCCC
Q 031237 155 GNFVGAKPF 163 (163)
Q Consensus 155 gn~~g~~~Y 163 (163)
||+.|++||
T Consensus 167 GN~~g~~~Y 175 (196)
T 1u53_A 167 GNMMGKDIY 175 (196)
T ss_dssp CCCTTSBSS
T ss_pred CCCCCCcCC
Confidence 999999998
No 8
>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}
Probab=100.00 E-value=4.8e-40 Score=242.45 Aligned_cols=132 Identities=35% Similarity=0.739 Sum_probs=112.6
Q ss_pred CccHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHHhhCCCCcccCC------CCccceE
Q 031237 27 ARHPDDWLHAHNGIRIQMG-----------------LPALAWDDKLADYAKWYANERRGDCRLEHSD------TPFGENL 83 (163)
Q Consensus 27 ~~~~~~iL~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~------~~~Gen~ 83 (163)
++++++||+.||.+|++++ |++|+||++||+.||.|| ++|.+.|+. ..+||||
T Consensus 40 ~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A----~~C~~~Hs~c~~~~~~~~GeNl 115 (218)
T 2vzn_A 40 DAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWA----NQCTFEHDACRNVERFAVGQNI 115 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHH----TTCCSSCCSCCCCSSSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHH----HhCCcCCCCCCCCccCCCceEE
Confidence 4678999999999999973 789999999999999999 999999986 1489999
Q ss_pred EeecC----CCCHHHHHHHHHhhhccCCCCCC---CCC--CCCC-cchHhhhHhhhcCeeeEEEEEecC-C---CEEEEE
Q 031237 84 AWADY----DMKGSEAIQMWIDEVKDYDYNSN---TCR--VPDM-CGHYTQVVWRNTARVGCARVKCHN-G---NTFFTC 149 (163)
Q Consensus 84 ~~~~~----~~~~~~~v~~W~~e~~~y~~~~~---~~~--~~~~-~~~ftq~vw~~t~~vGCa~~~c~~-~---~~~~vC 149 (163)
++... ...+.++|+.||+|..+|+|... .+. . +. ++|||||||++|++||||++.|.. + ..++||
T Consensus 116 ~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~-~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vVC 194 (218)
T 2vzn_A 116 AATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNI-LMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVC 194 (218)
T ss_dssp EEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHH-HHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEEE
T ss_pred EEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCccc-CCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEEE
Confidence 98652 13567999999999999999842 111 1 23 899999999999999999999976 3 468999
Q ss_pred EeeCCCCCCCCCCC
Q 031237 150 NYDPPGNFVGAKPF 163 (163)
Q Consensus 150 ~Y~p~gn~~g~~~Y 163 (163)
+|+|+||+.|++||
T Consensus 195 ~Y~P~GN~~g~~~y 208 (218)
T 2vzn_A 195 NYGPAGNVLGAPIY 208 (218)
T ss_dssp EEESCCCCTTSCSS
T ss_pred EECCCCCCCCCccc
Confidence 99999999999998
No 9
>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}
Probab=100.00 E-value=2.6e-38 Score=253.44 Aligned_cols=134 Identities=17% Similarity=0.293 Sum_probs=115.8
Q ss_pred cCCccHHHHHHHHHHHHhhC--C--------------CCCCcccHHHHHHHHHHHHHhhCCCCcccCC-CCccceEEeec
Q 031237 25 ANARHPDDWLHAHNGIRIQM--G--------------LPALAWDDKLADYAKWYANERRGDCRLEHSD-TPFGENLAWAD 87 (163)
Q Consensus 25 ~~~~~~~~iL~~hN~~R~~~--~--------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~-~~~Gen~~~~~ 87 (163)
.+++.+++||+.||.+|+++ | |++|+||++||..||.|| ++|.+.|+. ..+|||++...
T Consensus 32 ~~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a----~~C~~~h~~~~~~GeNl~~~~ 107 (424)
T 3nt8_A 32 ITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAI----QSCPSGFAGIQGVAQNTMSWS 107 (424)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHC----TTCCSSCCCCTTCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHH----hhCCCcCCCCCCceeeEEecc
Confidence 34567899999999999999 2 788999999999999999 999999886 46999998764
Q ss_pred --C---C--CCHHHHHHHHHhhhccCCCCCCCCCCCCCcchHhhhHhhhcCeeeEEEEEecCCCEEEEEEeeCCCCCCCC
Q 031237 88 --Y---D--MKGSEAIQMWIDEVKDYDYNSNTCRVPDMCGHYTQVVWRNTARVGCARVKCHNGNTFFTCNYDPPGNFVGA 160 (163)
Q Consensus 88 --~---~--~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~ 160 (163)
+ + ..+.++|+.||+|..+|++..........++|||||||+++++||||++.|.. .+++||+|+|+||+.|+
T Consensus 108 ~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN~~g~ 186 (424)
T 3nt8_A 108 SSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT-KLAVSCIYNGVGYITNQ 186 (424)
T ss_dssp CTTCCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT-EEEEEEEESSCCCSTTC
T ss_pred ccCCcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC-cEEEEEEECCCCCcccc
Confidence 1 1 13789999999999999998544333023999999999999999999999987 89999999999999999
Q ss_pred CCC
Q 031237 161 KPF 163 (163)
Q Consensus 161 ~~Y 163 (163)
+||
T Consensus 187 ~~Y 189 (424)
T 3nt8_A 187 PMW 189 (424)
T ss_dssp BSS
T ss_pred ccc
Confidence 998
No 10
>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*
Probab=100.00 E-value=1.2e-37 Score=231.80 Aligned_cols=132 Identities=19% Similarity=0.238 Sum_probs=110.7
Q ss_pred CCccHHHHHHHHHHHHhhC-----------CCCCCcccHHHHHHHHHHHHHhhCCCCcccCC---C----CccceEEeec
Q 031237 26 NARHPDDWLHAHNGIRIQM-----------GLPALAWDDKLADYAKWYANERRGDCRLEHSD---T----PFGENLAWAD 87 (163)
Q Consensus 26 ~~~~~~~iL~~hN~~R~~~-----------~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~---~----~~Gen~~~~~ 87 (163)
++++++.||+.||.+|+.+ .|++|+||++||..||.|| ++|.+.|+. . .+|||++..+
T Consensus 37 s~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a----~~C~~~h~~c~~~~~~~~~Gen~~~~~ 112 (233)
T 3u3l_C 37 LKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHT----KGCVGETHACRNTERFWLPGQLNFKYS 112 (233)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHH----TTCCSCCCCBCCCSSCSSCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHH----HhCCCCCCcccccCcCCcCeEEEEEec
Confidence 3568999999999999999 4999999999999999999 999999976 1 5899887654
Q ss_pred CC--C----CHHHHHHHHHhhhccCCCCC----CCCCCCCC-cchHhhhHhhhcCeeeEEEEEecCC---CEEEEEEeeC
Q 031237 88 YD--M----KGSEAIQMWIDEVKDYDYNS----NTCRVPDM-CGHYTQVVWRNTARVGCARVKCHNG---NTFFTCNYDP 153 (163)
Q Consensus 88 ~~--~----~~~~~v~~W~~e~~~y~~~~----~~~~~~~~-~~~ftq~vw~~t~~vGCa~~~c~~~---~~~~vC~Y~p 153 (163)
+. . .+.++|+.||+|..+|++.. +.... +. ++|||||||++|++||||++.|..+ .+++||+|+|
T Consensus 113 ~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~-~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p 191 (233)
T 3u3l_C 113 GDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGP-NGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS 191 (233)
T ss_dssp ESSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC---CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCccc-ccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC
Confidence 32 1 26899999999999998653 11111 33 9999999999999999999999764 4799999997
Q ss_pred CCCCCCCCCC
Q 031237 154 PGNFVGAKPF 163 (163)
Q Consensus 154 ~gn~~g~~~Y 163 (163)
||+.|++||
T Consensus 192 -GN~~g~~~Y 200 (233)
T 3u3l_C 192 -QNTRGRPVY 200 (233)
T ss_dssp -CCCTTSCSS
T ss_pred -CCCCCCcee
Confidence 999999998
No 11
>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}
Probab=100.00 E-value=2.8e-36 Score=241.58 Aligned_cols=134 Identities=31% Similarity=0.608 Sum_probs=115.1
Q ss_pred cCCccHHHHHHHHHHHHhhCC-----------------CCCCcccHHHHHHHHHHHHHhhCCCCcccCCC----CccceE
Q 031237 25 ANARHPDDWLHAHNGIRIQMG-----------------LPALAWDDKLADYAKWYANERRGDCRLEHSDT----PFGENL 83 (163)
Q Consensus 25 ~~~~~~~~iL~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~----~~Gen~ 83 (163)
.+++++++||+.||.+|++++ |++|+||++||+.||.|| ++|.+.|++. .+|||+
T Consensus 233 ~~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a----~~C~~~h~~~~~~~~~GeNl 308 (424)
T 3nt8_A 233 MTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHG----NKCVYQHSHGEDRPGLGENI 308 (424)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHH----TTCCSSCCCTTTSTTCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHH----HhCcccCCCccccCccceeE
Confidence 345789999999999999985 348999999999999999 9999999863 689999
Q ss_pred EeecC-C----CCHHHHHHHHHhhhccCCCCCCC-C-----CCCCC-cchHhhhHhhhcCeeeEEEEEecCCCEEEEEEe
Q 031237 84 AWADY-D----MKGSEAIQMWIDEVKDYDYNSNT-C-----RVPDM-CGHYTQVVWRNTARVGCARVKCHNGNTFFTCNY 151 (163)
Q Consensus 84 ~~~~~-~----~~~~~~v~~W~~e~~~y~~~~~~-~-----~~~~~-~~~ftq~vw~~t~~vGCa~~~c~~~~~~~vC~Y 151 (163)
++.+. . ..+.++|+.||+|..+|+|.... + ..++. ++|||||||+++++||||++.|.+ ..++||+|
T Consensus 309 ~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~-~~~~VC~Y 387 (424)
T 3nt8_A 309 YKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCND-FTFGVCQY 387 (424)
T ss_dssp EEESSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSS-SEEEEEEE
T ss_pred EecccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCC-CeEEEEEe
Confidence 98762 2 24789999999999999987543 1 11133 999999999999999999999987 68999999
Q ss_pred eCCCCCCCCCCC
Q 031237 152 DPPGNFVGAKPF 163 (163)
Q Consensus 152 ~p~gn~~g~~~Y 163 (163)
+|+||+.|++||
T Consensus 388 ~p~GN~~g~~~Y 399 (424)
T 3nt8_A 388 GPGGNYMGHVIY 399 (424)
T ss_dssp ESCCCCTTSBSS
T ss_pred cCCCCcCCCCCC
Confidence 999999999998
No 12
>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A
Probab=100.00 E-value=1.1e-33 Score=205.28 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=94.5
Q ss_pred cCCccHHHHHHHHHHHHhhCC------------CCCCcccHHHHHHHHHHHHHhhCCCCcccCCCCccceEEeecC---C
Q 031237 25 ANARHPDDWLHAHNGIRIQMG------------LPALAWDDKLADYAKWYANERRGDCRLEHSDTPFGENLAWADY---D 89 (163)
Q Consensus 25 ~~~~~~~~iL~~hN~~R~~~~------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~Gen~~~~~~---~ 89 (163)
.++++++.||+.||.+|+.++ |.+|+||++||..||.|| + |. .+. ...|||++..++ .
T Consensus 14 lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A----~-C~-~~~-~~~GeNl~~~sg~~~~ 86 (206)
T 3s6s_A 14 VDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEI----K-LP-GYA-DLHHRGVTRFSGDYEG 86 (206)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHH----H-ST-THH-HHTTCEEEEEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhh----c-CC-CCC-CCCCcEEEEecCCCCc
Confidence 345689999999999999873 678999999999999999 8 98 432 223999965432 2
Q ss_pred CCH--HHHHHHHHhhhccCCCCCCCCCCCCCcchHhhhHhhhcCeeeEEEEEec----CC-CEEEEEEeeCCCCCCCCCC
Q 031237 90 MKG--SEAIQMWIDEVKDYDYNSNTCRVPDMCGHYTQVVWRNTARVGCARVKCH----NG-NTFFTCNYDPPGNFVGAKP 162 (163)
Q Consensus 90 ~~~--~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~vw~~t~~vGCa~~~c~----~~-~~~~vC~Y~p~gn~~g~~~ 162 (163)
..+ .++|+.|++| . ++|||||||++|++||||++.|. .+ .+++||+|+|+| .|++|
T Consensus 87 ~~~~~~~av~~W~~E------------~---~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~~~ 149 (206)
T 3s6s_A 87 SAISALKEILETFSA------------D---KNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDGES 149 (206)
T ss_dssp CHHHHHHHHHHHHTT------------C---HHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTTCC
T ss_pred cchhHHHHHHHHHhh------------h---hhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCCCC
Confidence 223 3899999999 2 78999999999999999999996 22 589999999999 79999
Q ss_pred C
Q 031237 163 F 163 (163)
Q Consensus 163 Y 163 (163)
|
T Consensus 150 Y 150 (206)
T 3s6s_A 150 F 150 (206)
T ss_dssp C
T ss_pred c
Confidence 8
No 13
>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}
Probab=99.70 E-value=2.7e-17 Score=127.39 Aligned_cols=94 Identities=26% Similarity=0.382 Sum_probs=83.9
Q ss_pred ccHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhCCCCcccCCC-----------------CccceEEeecCCC
Q 031237 28 RHPDDWLHAHNGIRIQMGLPALAWDDKLADYAKWYANERRGDCRLEHSDT-----------------PFGENLAWADYDM 90 (163)
Q Consensus 28 ~~~~~iL~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~-----------------~~Gen~~~~~~~~ 90 (163)
.+++++|++||.+|..+|++||+||..|++.|+.||+.|+..|.+.|... .+||||+.+. .
T Consensus 219 a~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~--~ 296 (339)
T 4ifa_A 219 GNMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQH--S 296 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESC--S
T ss_pred HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeC--C
Confidence 45789999999999999999999999999999999999999899999751 3699999876 3
Q ss_pred CHHHHHHHHHhhhccCCCCCCCCCCCCCcchHhhhHhhhcCeeeEEEEE
Q 031237 91 KGSEAIQMWIDEVKDYDYNSNTCRVPDMCGHYTQVVWRNTARVGCARVK 139 (163)
Q Consensus 91 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~vw~~t~~vGCa~~~ 139 (163)
++..+|+.|++ +.+|+.+|+|++.++||||+..
T Consensus 297 s~~~av~~Wmn----------------SpGHr~NIL~~~~t~iGvGv~~ 329 (339)
T 4ifa_A 297 DGVAALQGWLN----------------SEGHRKNLLNEQFTGLGVGVYD 329 (339)
T ss_dssp SHHHHHHHHHT----------------SHHHHHHHTCTTCCEEEEEEET
T ss_pred CHHHHHHHHhC----------------CHhHHHHHhCCCCCEEEEEEEe
Confidence 68899999985 3689999999999999999863
No 14
>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}
Probab=99.49 E-value=9.2e-14 Score=107.31 Aligned_cols=92 Identities=16% Similarity=0.137 Sum_probs=75.6
Q ss_pred cHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhCCCCcccCC----------------CCccceEEeecCCCCH
Q 031237 29 HPDDWLHAHNGIRIQMGLPALAWDDKLADYAKWYANERRGDCRLEHSD----------------TPFGENLAWADYDMKG 92 (163)
Q Consensus 29 ~~~~iL~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~----------------~~~Gen~~~~~~~~~~ 92 (163)
..+++|+++|.+|..+|++||.||..|+..|+.||+.|+......|.+ ..+||||+.+. .++
T Consensus 205 ~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~--~~~ 282 (323)
T 4h0a_A 205 QLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAF--NDV 282 (323)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESC--CSH
T ss_pred HHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCC--CCH
Confidence 456799999999999999999999999999999999998654444433 13599999876 378
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCcchHhhhHhhhcCeeeEEEE
Q 031237 93 SEAIQMWIDEVKDYDYNSNTCRVPDMCGHYTQVVWRNTARVGCARV 138 (163)
Q Consensus 93 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~vw~~t~~vGCa~~ 138 (163)
..+|+.|++ +.+|..+|+..+.++||+|+.
T Consensus 283 ~~vv~~Wmn----------------SpgHR~NiL~~~~t~iGvGv~ 312 (323)
T 4h0a_A 283 PTLIHSWMN----------------SDIHRSRLLNSKYDEMGGDVM 312 (323)
T ss_dssp HHHHHHHHT----------------SHHHHHHHTCSSCCEEEEEEE
T ss_pred HHHHHHHHc----------------CHHHHHHHcCCCCCEEEEEEE
Confidence 899999984 468999999999999999985
No 15
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=84.50 E-value=0.94 Score=19.98 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=14.2
Q ss_pred HHHHHHHHhhCCCCCCc
Q 031237 34 LHAHNGIRIQMGLPALA 50 (163)
Q Consensus 34 L~~hN~~R~~~~m~~L~ 50 (163)
++..|..|.+.||.|+.
T Consensus 4 iEEtnk~r~~lGLkplp 20 (21)
T 3plv_C 4 IEETNELRASLGLKLIP 20 (26)
T ss_dssp HHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHcCCCCCC
Confidence 46789999999998873
No 16
>3ukw_C Bimax1 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; HET: BTB; 2.10A {Mus musculus}
Probab=31.06 E-value=16 Score=16.44 Aligned_cols=14 Identities=29% Similarity=0.567 Sum_probs=8.0
Q ss_pred HhhCCCCCCcccHH
Q 031237 41 RIQMGLPALAWDDK 54 (163)
Q Consensus 41 R~~~~m~~L~Wd~~ 54 (163)
|+.-.-.||+||++
T Consensus 4 rrrprkrplewded 17 (28)
T 3ukw_C 4 RRRPRKRPLEWDED 17 (28)
T ss_dssp ---CCCCCCCCCGG
T ss_pred ccccccCCcccccc
Confidence 33444678999875
No 17
>2ahm_A Replicase NSP7, replicase polyprotein 1AB, light chain; SARS-COV, non-structural protein, S complex, hexadecamer, viral protein, replication; 2.40A {Sars coronavirus} SCOP: a.8.9.1 PDB: 1ysy_A 2kys_A
Probab=25.09 E-value=85 Score=18.79 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=23.6
Q ss_pred cccHHHHHHHHHHH-HHHhhcccCCccHHHHHHHHHHHHh
Q 031237 4 RMTTEFCKMLLCSL-MMITLGMANARHPDDWLHAHNGIRI 42 (163)
Q Consensus 4 ~m~~~~~~l~l~~~-~~~~~~~~~~~~~~~iL~~hN~~R~ 42 (163)
||...-|.-++.+- +......+....=+.+++.||++-.
T Consensus 7 KLTDvKCtnVVLl~~L~~l~veaNSk~WayCV~LHN~Il~ 46 (88)
T 2ahm_A 7 KMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILL 46 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTSHHHHHHHHHHHHHHHT
T ss_pred cccccchhhhHHHHHHHHhhHHhhhHHHHHHHHHHHHHHc
Confidence 45555566555553 3333444444566789999999864
Done!