BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031239
MGGLFNQWRLCEIGLEDYLFVLLSRFLNALETKGGAHWLAENVELKNISSWNDPLGMLVV
GIRHLGFSAWKPAECAAIGNELFAWQEKGLSEKEGSEDGKIIWALRLKATLDRARRLTEE
YSEALLQIFPQKVQLLGKALGIPENSVRTYTEAEIRAGYVALF

High Scoring Gene Products

Symbol, full name Information P value
PWD
AT5G26570 		protein from Arabidopsis thaliana 4.7e-57

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031239
        (163 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2151089 - symbol:PWD "PHOSPHOGLUCAN WATER DIKI...   597  4.7e-57   1


>TAIR|locus:2151089 [details] [associations]
            symbol:PWD "PHOSPHOGLUCAN WATER DIKINASE" species:3702
            "Arabidopsis thaliana" [GO:0003824 "catalytic activity"
            evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005975 "carbohydrate metabolic process" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016301 "kinase
            activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
            [GO:0030246 "carbohydrate binding" evidence=IEA] [GO:2001070
            "starch binding" evidence=IEA] [GO:0005983 "starch catabolic
            process" evidence=TAS] [GO:0009536 "plastid" evidence=IDA]
            [GO:0051752 "phosphoglucan, water dikinase activity"
            evidence=ISS;IDA] [GO:0005982 "starch metabolic process"
            evidence=RCA;IMP] [GO:0019200 "carbohydrate kinase activity"
            evidence=IDA] [GO:0046777 "protein autophosphorylation"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0000272 "polysaccharide catabolic process" evidence=RCA]
            [GO:0009664 "plant-type cell wall organization" evidence=RCA]
            [GO:0019252 "starch biosynthetic process" evidence=RCA]
            InterPro:IPR002044 InterPro:IPR002192 InterPro:IPR013784
            InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00686 Pfam:PF01326
            PROSITE:PS00370 PROSITE:PS00742 PROSITE:PS51166 SMART:SM01065
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570
            Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0046777
            GO:GO:0005983 Gene3D:3.30.1490.20 Gene3D:3.30.470.20 EMBL:AF077407
            SUPFAM:SSF49452 CAZy:CBM20 GO:GO:2001070 eggNOG:COG0574
            EMBL:AY747068 EMBL:AJ635427 EMBL:BT005745 IPI:IPI00545525
            PIR:T01856 PIR:T01857 RefSeq:NP_198009.3 UniGene:At.20942
            ProteinModelPortal:Q6ZY51 SMR:Q6ZY51 STRING:Q6ZY51 PaxDb:Q6ZY51
            PRIDE:Q6ZY51 ProMEX:Q6ZY51 EnsemblPlants:AT5G26570.1 GeneID:832706
            KEGG:ath:AT5G26570 GeneFarm:3075 TAIR:At5g26570
            HOGENOM:HOG000265182 InParanoid:Q6ZY51 KO:K15535 OMA:GQIPCFE
            PhylomeDB:Q6ZY51 ProtClustDB:CLSN2681649
            BioCyc:ARA:AT5G26570-MONOMER BioCyc:MetaCyc:AT5G26570-MONOMER
            ArrayExpress:Q6ZY51 Genevestigator:Q6ZY51 GermOnline:AT5G26570
            GO:GO:0019200 GO:GO:0051752 Uniprot:Q6ZY51
        Length = 1196

 Score = 597 (215.2 bits), Expect = 4.7e-57, P = 4.7e-57
 Identities = 112/154 (72%), Positives = 129/154 (83%)

Query:     7 QWRLCEIGLEDYLFVLLSRFLNALETKGGAHWLAENVELKNISSWNDPLGMLVVGIRHLG 66
             +WRLCEIGLEDY FVLLSRFLNALET GGA  LA++V  +N++SWNDPL  LV+G+  +G
Sbjct:   518 KWRLCEIGLEDYFFVLLSRFLNALETMGGADQLAKDVGSRNVASWNDPLDALVLGVHQVG 577

Query:    67 FSAWKPAECAAIGNELFAWQEKGLSEKEGSEDGKIIWALRLKATLDRARRLTEEYSEALL 126
              S WK  EC AIGNEL AW+E+ L EKEG EDGK IWA+RLKATLDRARRLT EYS+ LL
Sbjct:   578 LSGWKQEECLAIGNELLAWRERDLLEKEGEEDGKTIWAMRLKATLDRARRLTAEYSDLLL 637

Query:   127 QIFPQKVQLLGKALGIPENSVRTYTEAEIRAGYV 160
             QIFP  V++LGKALGIPENSV+TYTEAEIRAG +
Sbjct:   638 QIFPPNVEILGKALGIPENSVKTYTEAEIRAGII 671


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      163       163   0.00084  107 3  11 22  0.38    32
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  171 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.55u 0.17s 14.72t   Elapsed:  00:00:01
  Total cpu time:  14.55u 0.17s 14.72t   Elapsed:  00:00:01
  Start:  Mon May 20 20:53:25 2013   End:  Mon May 20 20:53:26 2013

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