BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031239
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis
thaliana GN=GWD3 PE=1 SV=1
Length = 1196
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/158 (70%), Positives = 130/158 (82%)
Query: 3 GLFNQWRLCEIGLEDYLFVLLSRFLNALETKGGAHWLAENVELKNISSWNDPLGMLVVGI 62
+ +WRLCEIGLEDY FVLLSRFLNALET GGA LA++V +N++SWNDPL LV+G+
Sbjct: 514 AMRQKWRLCEIGLEDYFFVLLSRFLNALETMGGADQLAKDVGSRNVASWNDPLDALVLGV 573
Query: 63 RHLGFSAWKPAECAAIGNELFAWQEKGLSEKEGSEDGKIIWALRLKATLDRARRLTEEYS 122
+G S WK EC AIGNEL AW+E+ L EKEG EDGK IWA+RLKATLDRARRLT EYS
Sbjct: 574 HQVGLSGWKQEECLAIGNELLAWRERDLLEKEGEEDGKTIWAMRLKATLDRARRLTAEYS 633
Query: 123 EALLQIFPQKVQLLGKALGIPENSVRTYTEAEIRAGYV 160
+ LLQIFP V++LGKALGIPENSV+TYTEAEIRAG +
Sbjct: 634 DLLLQIFPPNVEILGKALGIPENSVKTYTEAEIRAGII 671
>sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp.
japonica GN=GWD3 PE=3 SV=2
Length = 1206
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/158 (67%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Query: 3 GLFNQWRLCEIGLEDYLFVLLSRFLNALETKGGAHWLAENVELKNISSWNDPLGMLVVGI 62
+ +WRLCEI LEDY FVLLSRF+N LE GG+ LA++V +N + W+ L LV+GI
Sbjct: 532 AMRQKWRLCEISLEDYSFVLLSRFINTLEALGGSASLAKDVA-RNTTLWDTTLDALVIGI 590
Query: 63 RHLGFSAWKPAECAAIGNELFAWQEKGLSEKEGSEDGKIIWALRLKATLDRARRLTEEYS 122
+ FS WK EC AIGNE+ +W++KGLSE EG EDGK IW+LRLKATLDRARRLTEEYS
Sbjct: 591 NQVSFSGWKTDECIAIGNEILSWKQKGLSESEGCEDGKYIWSLRLKATLDRARRLTEEYS 650
Query: 123 EALLQIFPQKVQLLGKALGIPENSVRTYTEAEIRAGYV 160
EALL IFP+KV ++GKALGIP+NSVRTYTEAEIRAG V
Sbjct: 651 EALLSIFPEKVMVIGKALGIPDNSVRTYTEAEIRAGIV 688
>sp|Q9SAC6|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis
thaliana GN=GWD1 PE=1 SV=2
Length = 1399
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 103 WALRLKATLDRARRLTEEYSEALLQIFPQKVQLLGKALGIPENSVRTYTEAEIRAGYVA 161
WAL K+ LDR+R +E L+I + LG LG+ +++V +TE IRAG A
Sbjct: 863 WALYAKSVLDRSRLALASKAERYLEILQPSAEYLGSCLGVDQSAVSIFTEEIIRAGSAA 921
>sp|Q9STV0|GWD2_ARATH Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2
SV=3
Length = 1278
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 94 EGSEDGKIIWALRLKATLDRARRLTEEYSEALLQIFPQKVQLLGKALGIPENSVRTYTEA 153
E + WAL+ KA LDR + + + + I + LG+ L + ++ + +TE
Sbjct: 736 EAYRPHDVQWALQTKAVLDRLQLVLADRCQHYFTIIQPTAKYLGQLLRVDKHGIDVFTEE 795
Query: 154 EIRAG 158
IRAG
Sbjct: 796 VIRAG 800
>sp|Q9AWA5|GWD1_SOLTU Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum
GN=R1 PE=1 SV=2
Length = 1464
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%)
Query: 96 SEDGKIIWALRLKATLDRARRLTEEYSEALLQIFPQKVQLLGKALGIPENSVRTYTEAEI 155
S G WAL KA LDR R +E + + LG LG+ + ++ +TE I
Sbjct: 921 SNGGDNHWALFAKAVLDRTRLALASKAEWYHHLLQPSAEYLGSILGVDQWALNIFTEEII 980
Query: 156 RAGYVA 161
RAG A
Sbjct: 981 RAGSAA 986
>sp|Q5FPL0|GUAA_GLUOX GMP synthase [glutamine-hydrolyzing] OS=Gluconobacter oxydans
(strain 621H) GN=guaA PE=3 SV=1
Length = 533
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ E E L ++F +V++LG+ LGIPE+ V
Sbjct: 375 RMNMELVEPLRELFKDEVRMLGRELGIPESIV 406
>sp|Q50562|ISF_METTE Iron-sulfur flavoprotein OS=Methanosarcina thermophila GN=isf PE=1
SV=2
Length = 191
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 21 VLLSRFLNALETK-------GGAHWLAENVELKNISSWNDPLGMLVVGIR-HLGFSAWKP 72
VLL R AL+ K GG+ + +++I W GM+VVG H G W P
Sbjct: 101 VLLRRKNFALKNKVGAALSVGGSRNGGQEKTIQSIHDWMHIHGMIVVGDNSHFGGITWNP 160
Query: 73 AECAAIGNELFAWQEKGLSE 92
AE +G + + K L +
Sbjct: 161 AEEDTVGMQTVSETAKKLCD 180
>sp|P49365|DHYS_NEUCR Deoxyhypusine synthase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dys-1
PE=1 SV=2
Length = 353
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 58 LVVGIRHLGFSAWKPAECAAIGNELFAWQEKGLSEK 93
L+ G++H+GF A E I NE+ A+++ SEK
Sbjct: 46 LLQGMKHMGFQASSMCEAVRIINEMRAYRDPTTSEK 81
>sp|Q8BG87|TET3_MOUSE Methylcytosine dioxygenase TET3 OS=Mus musculus GN=Tet3 PE=1 SV=3
Length = 1668
Score = 30.8 bits (68), Expect = 4.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 71 KPAECAAIGNELFAWQEKGLSEKEGSEDGKIIWALRLKATLDRARRLTEEYSEALLQIFP 130
KP C L +Q K L++ G +W ++K +RAR+ EE A L +
Sbjct: 1553 KPNRCHPTRISLVFYQHKNLNQ---PNHGLALWEAKMKQLAERARQRQEE--AARLGLGQ 1607
Query: 131 QKVQLLGK 138
Q+ +L GK
Sbjct: 1608 QEAKLYGK 1615
>sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata
GN=R1 PE=2 SV=1
Length = 1475
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 103 WALRLKATLDRARRLTEEYSEALLQIFPQKVQLLGKALGIPENSVRTYTEAEIRAGYVA 161
WAL K+ LDR R ++ ++ + LG L + + +V +TE IRAG A
Sbjct: 936 WALFAKSVLDRTRLALAGKADWYQKVLQPSAEYLGTLLSVDKWAVDIFTEEMIRAGSAA 994
>sp|Q8FWT4|GUAA_BRUSU GMP synthase [glutamine-hydrolyzing] OS=Brucella suis biovar 1
(strain 1330) GN=guaA PE=3 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|A5VU71|GUAA_BRUO2 GMP synthase [glutamine-hydrolyzing] OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=guaA PE=3 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|C0RKS9|GUAA_BRUMB GMP synthase [glutamine-hydrolyzing] OS=Brucella melitensis biotype
2 (strain ATCC 23457) GN=guaA PE=3 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|A9MEB0|GUAA_BRUC2 GMP synthase [glutamine-hydrolyzing] OS=Brucella canis (strain ATCC
23365 / NCTC 10854) GN=guaA PE=3 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|A9WY54|GUAA_BRUSI GMP synthase [glutamine-hydrolyzing] OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=guaA PE=3 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|Q8YBL2|GUAA_BRUME GMP synthase [glutamine-hydrolyzing] OS=Brucella melitensis biotype
1 (strain 16M / ATCC 23456 / NCTC 10094) GN=guaA PE=3
SV=1
Length = 507
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|Q577H0|GUAA_BRUAB GMP synthase [glutamine-hydrolyzing] OS=Brucella abortus biovar 1
(strain 9-941) GN=guaA PE=3 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|Q2YK38|GUAA_BRUA2 GMP synthase [glutamine-hydrolyzing] OS=Brucella abortus (strain
2308) GN=guaA PE=3 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|B2SBN5|GUAA_BRUA1 GMP synthase [glutamine-hydrolyzing] OS=Brucella abortus (strain
S19) GN=guaA PE=3 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 116 RLTEEYSEALLQIFPQKVQLLGKALGIPENSV 147
R+ + E L ++F +V+LLGK LG+P++ +
Sbjct: 362 RMKMQLVEPLRELFKDEVRLLGKELGLPDSFI 393
>sp|B1XW11|SYQ_POLNS Glutamine--tRNA ligase OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=glnS PE=3 SV=1
Length = 590
Score = 30.0 bits (66), Expect = 7.6, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 27 LNALETKGGAHWLAENVELKNISSWNDPLGMLVVGIRHLGFS 68
LN T L + VE K++ W+DP +VGIR G++
Sbjct: 293 LNLTYTITSKRKLLQLVEEKHVEGWDDPRMPTIVGIRRRGYT 334
>sp|O43151|TET3_HUMAN Methylcytosine dioxygenase TET3 OS=Homo sapiens GN=TET3 PE=2 SV=3
Length = 1660
Score = 29.6 bits (65), Expect = 8.4, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 71 KPAECAAIGNELFAWQEKGLSEKEGSEDGKIIWALRLKATLDRARRLTEEYSEALLQIFP 130
KP C L +Q K L++ G +W ++K +RAR EE A L +
Sbjct: 1545 KPNRCHPTRISLVFYQHKNLNQ---PNHGLALWEAKMKQLAERARARQEE--AARLGLGQ 1599
Query: 131 QKVQLLGK 138
Q+ +L GK
Sbjct: 1600 QEAKLYGK 1607
>sp|B7J0H6|G6PI_BORBZ Glucose-6-phosphate isomerase OS=Borrelia burgdorferi (strain ZS7)
GN=pgi PE=3 SV=1
Length = 530
Score = 29.6 bits (65), Expect = 9.2, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 10 LCEIGLEDYLFVLLSRFLNALETKGGAHWLAENVELKNISSWNDPLGMLVV 60
L I +++ LF+++S+ N LETK +L ++L I + + ++ +
Sbjct: 195 LSSINVDETLFIIVSKSGNTLETKANMQFLINKLKLNGIKEYKKQMVIITL 245
>sp|O51672|G6PI_BORBU Glucose-6-phosphate isomerase OS=Borrelia burgdorferi (strain ATCC
35210 / B31 / CIP 102532 / DSM 4680) GN=pgi PE=3 SV=2
Length = 530
Score = 29.6 bits (65), Expect = 9.2, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 10 LCEIGLEDYLFVLLSRFLNALETKGGAHWLAENVELKNISSWNDPLGMLVV 60
L I +++ LF+++S+ N LETK +L ++L I + + ++ +
Sbjct: 195 LSSINVDETLFIIVSKSGNTLETKANMQFLINKLKLNGIKEYKKQMVIITL 245
>sp|Q2J3Y9|Y109_RHOP2 UPF0235 protein RPB_0109 OS=Rhodopseudomonas palustris (strain
HaA2) GN=RPB_0109 PE=3 SV=1
Length = 108
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 12/65 (18%)
Query: 98 DGKIIWALRLKATLDRARRLTEEYSEALLQIFPQKVQLLGKALGIPENSVRTYTEAEIRA 157
DG+ + LR++A D E + A+ ++LL KALG+P+ +VR + A R
Sbjct: 35 DGRPVVKLRVRAIADGG-----EANRAV-------IELLAKALGVPKRNVRLLSGATSRQ 82
Query: 158 GYVAL 162
+A+
Sbjct: 83 KQIAI 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,197,855
Number of Sequences: 539616
Number of extensions: 2479074
Number of successful extensions: 6303
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6281
Number of HSP's gapped (non-prelim): 26
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)