BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031242
         (163 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
           Ectodomain
 pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
           Brassinolide
          Length = 772

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPSQXXXXXXXXXXXX 60
           +G    L+ LN+ HN ++GSIP   G+L+ +  LDLS N L G+IP              
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 708

Query: 61  XXXXXVGKIPTSTQLQSFSPTSYEGNKGLYGPPL 94
                 G IP   Q ++F P  +  N GL G PL
Sbjct: 709 SNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 742



 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPSQXXXXXXXXXXXX 60
           +     L +L++S N L+G+IPSS G+L ++  L L +N L G+IP +            
Sbjct: 411 LSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 470

Query: 61  XXXXXVGKIPT 71
                 G+IP+
Sbjct: 471 DFNDLTGEIPS 481



 Score = 37.0 bits (84), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 32/47 (68%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPS 47
           +G+ ++L  L +S+N+ +G+IP+  G+ + +  LDL+ N  +G IP+
Sbjct: 507 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553



 Score = 36.2 bits (82), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 6   SLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPS 47
           +L  L + +N  TG IP +  N  ++ SL LS N LSG IPS
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 433



 Score = 34.7 bits (78), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 10  LNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPSQ 48
           +++S+N LTG IP   G L+ +  L LS N+ SG IP++
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 530



 Score = 34.7 bits (78), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 5   KSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIP 46
           K+L  L +  N LTG IPS   N   +  + LS N L+G+IP
Sbjct: 463 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504



 Score = 32.7 bits (73), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 3   QFKSLYALNMSHNALTGSIPSSFGNLK-QIESLDLSMNNLSGKI 45
           + + L  L++S N  +G +P S  NL   + +LDLS NN SG I
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381



 Score = 27.3 bits (59), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query: 2   GQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIP 46
           G   +L  L++S N   G++P  FG+   +ESL LS NN SG++P
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 332


>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
 pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
          Length = 768

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPSQXXXXXXXXXXXX 60
           +G    L+ LN+ HN ++GSIP   G+L+ +  LDLS N L G+IP              
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711

Query: 61  XXXXXVGKIPTSTQLQSFSPTSYEGNKGLYGPPL 94
                 G IP   Q ++F P  +  N GL G PL
Sbjct: 712 SNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 745



 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPSQXXXXXXXXXXXX 60
           +     L +L++S N L+G+IPSS G+L ++  L L +N L G+IP +            
Sbjct: 414 LSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473

Query: 61  XXXXXVGKIPT 71
                 G+IP+
Sbjct: 474 DFNDLTGEIPS 484



 Score = 37.0 bits (84), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 32/47 (68%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPS 47
           +G+ ++L  L +S+N+ +G+IP+  G+ + +  LDL+ N  +G IP+
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556



 Score = 36.2 bits (82), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 6   SLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPS 47
           +L  L + +N  TG IP +  N  ++ SL LS N LSG IPS
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436



 Score = 34.7 bits (78), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 10  LNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPSQ 48
           +++S+N LTG IP   G L+ +  L LS N+ SG IP++
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533



 Score = 34.7 bits (78), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 5   KSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIP 46
           K+L  L +  N LTG IPS   N   +  + LS N L+G+IP
Sbjct: 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507



 Score = 32.7 bits (73), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 3   QFKSLYALNMSHNALTGSIPSSFGNLK-QIESLDLSMNNLSGKI 45
           + + L  L++S N  +G +P S  NL   + +LDLS NN SG I
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384



 Score = 27.3 bits (59), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query: 2   GQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIP 46
           G   +L  L++S N   G++P  FG+   +ESL LS NN SG++P
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335


>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
           Inhibiting Protein), A Leucine Rich Repeat Protein
           Involved In Plant Defense
          Length = 313

 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 24/94 (25%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIPSQXXXXXXXXXXXX 60
           +G  K+L  L++ +N + G++P     LK + SL++S NNL G+IP              
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ------------- 286

Query: 61  XXXXXVGKIPTSTQLQSFSPTSYEGNKGLYGPPL 94
                         LQ F  ++Y  NK L G PL
Sbjct: 287 -----------GGNLQRFDVSAYANNKCLCGSPL 309



 Score = 37.0 bits (84), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIP 46
           + Q K+L  L+ S+NAL+G++P S  +L  +  +    N +SG IP
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166



 Score = 34.3 bits (77), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 27/46 (58%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIP 46
           + +   L+ L ++H  ++G+IP     +K + +LD S N LSG +P
Sbjct: 97  IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP 142



 Score = 31.2 bits (69), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQI-ESLDLSMNNLSGKIP 46
           +    +L  +    N ++G+IP S+G+  ++  S+ +S N L+GKIP
Sbjct: 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191



 Score = 27.7 bits (60), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 15  NALTGSIPSSFGNLKQIESLDLSMNNLSGKIPSQXXXXXXXXXXXXXXXXXVGKIPTS-T 73
           N L G IP +   L Q+  L ++  N+SG IP                    G +P S +
Sbjct: 87  NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146

Query: 74  QLQSFSPTSYEGNK 87
            L +    +++GN+
Sbjct: 147 SLPNLVGITFDGNR 160


>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
           Hagfish Vlrb.61
 pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
           Hybrid-Md-2-Eritoran Complex
 pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
           Hybrid-Md-2-Eritoran Complex
          Length = 276

 Score = 35.4 bits (80), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1   MGQFKSLYALNMSHNALTG-SIPSSFGNLKQIESLDLSMNNL 41
           +G  K+L  LN++HN +    +P  F NL  +E LDLS N +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161


>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
          Length = 278

 Score = 35.4 bits (80), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1   MGQFKSLYALNMSHNALTG-SIPSSFGNLKQIESLDLSMNNL 41
           +G  K+L  LN++HN +    +P  F NL  +E LDLS N +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 162


>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
           Complex
 pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
           Complex
          Length = 279

 Score = 35.4 bits (80), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1   MGQFKSLYALNMSHNALTG-SIPSSFGNLKQIESLDLSMNNL 41
           +G  K+L  LN++HN +    +P  F NL  +E LDLS N +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163


>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
          Length = 279

 Score = 35.4 bits (80), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1   MGQFKSLYALNMSHNALTG-SIPSSFGNLKQIESLDLSMNNL 41
           +G  K+L  LN++HN +    +P  F NL  +E LDLS N +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163


>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
          Length = 278

 Score = 35.4 bits (80), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1   MGQFKSLYALNMSHNALTG-SIPSSFGNLKQIESLDLSMNNL 41
           +G  K+L  LN++HN +    +P  F NL  +E LDLS N +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 162


>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
           And T399i In Complex With Md-2 And Lps
 pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
           And T399i In Complex With Md-2 And Lps
          Length = 635

 Score = 35.0 bits (79), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1   MGQFKSLYALNMSHNALTG-SIPSSFGNLKQIESLDLSMNNL 41
           +G  K+L  LN++HN +    +P  F NL  +E LDLS N +
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185


>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
           Hagfish Vlrb.61
          Length = 570

 Score = 35.0 bits (79), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1   MGQFKSLYALNMSHNALTG-SIPSSFGNLKQIESLDLSMNNL 41
           +G  K+L  LN++HN +    +P  F NL  +E LDLS N +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161


>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
           Ra Complex
 pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
           Ra Complex
          Length = 605

 Score = 35.0 bits (79), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 1   MGQFKSLYALNMSHNALTG-SIPSSFGNLKQIESLDLSMNNL 41
           +G  K+L  LN++HN +    +P  F NL  +E LDLS N +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161


>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
          Length = 599

 Score = 30.0 bits (66), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 1   MGQFKSLYALNMSHNAL-TGSIPSSFGNLKQIESLDLSMN 39
           +GQ  +L  LN++HN + +  +P+ F NL  +  +DLS N
Sbjct: 119 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 158


>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
 pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
 pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
 pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
          Length = 606

 Score = 30.0 bits (66), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 1   MGQFKSLYALNMSHNAL-TGSIPSSFGNLKQIESLDLSMN 39
           +GQ  +L  LN++HN + +  +P+ F NL  +  +DLS N
Sbjct: 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163


>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
           Tlr5 In Complex With Salmonella Flagellin
 pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
           Tlr5 In Complex With Salmonella Flagellin
          Length = 455

 Score = 28.5 bits (62), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 7   LYALNMSHNALTGSIPSS-FGNLKQIESLDLSMNNLSG 43
           L  LN+S N L GSI S  F NL ++E LDLS N++  
Sbjct: 325 LLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRA 361


>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
           Binding Of A Tri-Acylated Lipopeptide
          Length = 520

 Score = 27.7 bits (60), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 22/32 (68%)

Query: 10  LNMSHNALTGSIPSSFGNLKQIESLDLSMNNL 41
           L+ S+N LT ++  + G+L ++E+L L MN L
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQL 360


>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
 pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
          Length = 603

 Score = 27.7 bits (60), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 7   LYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIP 46
           L  LN+SHN   G    +F    Q+E LDL+   L    P
Sbjct: 375 LQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAP 414


>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
 pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
 pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
 pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
 pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
 pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
 pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
 pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
          Length = 612

 Score = 26.6 bits (57), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 1   MGQFKSLYALNMSHNALTGSIPSSFGNLKQIESLDLSMNNLSGKIP 46
           +   + L  LN+S+N   G    +F    Q+E LD++  +L  K P
Sbjct: 371 LKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAP 416


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.135    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,725,511
Number of Sequences: 62578
Number of extensions: 105572
Number of successful extensions: 261
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 149
Number of HSP's gapped (non-prelim): 107
length of query: 163
length of database: 14,973,337
effective HSP length: 91
effective length of query: 72
effective length of database: 9,278,739
effective search space: 668069208
effective search space used: 668069208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)