BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031245
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P40761|YUXK_BACSU Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168)
GN=yuxK PE=3 SV=1
Length = 137
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 72 VVIYDGVCHLCHGGVKWVIRADKYRKIKFCCLQSQAAEPYLRLCGL--DREDVLRRFLFV 129
V+++DGVC+LC+G V+++I+ D I F LQS+ + L+ GL DR D F+F+
Sbjct: 10 VLLFDGVCNLCNGAVQFIIKRDPDGLISFTSLQSETGQSLLKKSGLPTDRFD---SFVFI 66
Query: 130 EGPGLYHQASTGM 142
E +Y +++ +
Sbjct: 67 EDGQVYTKSTAAI 79
>sp|Q9SSR1|Y1259_ARATH DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana
GN=At1g52590 PE=1 SV=1
Length = 172
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 72 VVIYDGVCHLCHGGVKWVIRADKYRKIKFCCLQSQAAEPYLRLCGLDREDV 122
++++DGVC+LC+GGVK+V D+ R I+F LQS+A + L G +D+
Sbjct: 55 IMLFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDI 105
>sp|Q68FU5|CI085_RAT Uncharacterized protein C9orf85 homolog OS=Rattus norvegicus PE=2
SV=1
Length = 155
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 71 GVVIYDGVCHLCHGGVKWVIRADKYR---KIKFC--CLQSQAAEPYLRLC 115
++DGVC C ++W ++ KY+ K K C CLQ + Y +C
Sbjct: 37 NAKLHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMC 86
>sp|Q9CQ90|CI085_MOUSE Uncharacterized protein C9orf85 homolog OS=Mus musculus PE=2 SV=1
Length = 155
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 71 GVVIYDGVCHLCHGGVKWVIRADKYR---KIKFC--CLQSQAAEPYLRLC 115
++DGVC C ++W ++ KY+ K K C CLQ + Y +C
Sbjct: 37 NAKLHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMC 86
>sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85 PE=1
SV=1
Length = 179
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 74 IYDGVCHLCHGGVKWVIRADKYR---KIKFC--CLQSQAAEPYLRLC 115
++DGVC C ++W ++ KY+ K K C CLQ + Y +C
Sbjct: 40 LHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMC 86
>sp|Q7TME0|LPPR4_MOUSE Lipid phosphate phosphatase-related protein type 4 OS=Mus musculus
GN=Lppr4 PE=1 SV=2
Length = 766
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 98 IKFCCLQSQ----AAEPYLRLCGLDREDVLRRFLFVEGPGLYHQASTGMFSNIIHVSTIF 153
I +CCL + EP + G + LRR + G ++ ST + ++II +ST +
Sbjct: 144 ILYCCLSKRRNGAGLEPNINAGGCNFNSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGY 203
Query: 154 WLCPYYI 160
PY++
Sbjct: 204 Q-APYFL 209
>sp|Q7Z2D5|LPPR4_HUMAN Lipid phosphate phosphatase-related protein type 4 OS=Homo sapiens
GN=LPPR4 PE=1 SV=1
Length = 763
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 98 IKFCCLQSQ----AAEPYLRLCGLDREDVLRRFLFVEGPGLYHQASTGMFSNIIHVSTIF 153
I +CCL + EP + G + LRR + G ++ ST + ++II +ST +
Sbjct: 143 ILYCCLSKRRNGVGLEPNINAGGCNFNSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGY 202
Query: 154 WLCPYYI 160
PY++
Sbjct: 203 Q-APYFL 208
>sp|O49299|PGMC1_ARATH Probable phosphoglucomutase, cytoplasmic 1 OS=Arabidopsis thaliana
GN=At1g23190 PE=1 SV=2
Length = 583
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 14/71 (19%)
Query: 21 LKTLFPSPADVVPGVAADVADVTGADDLVYTEPPVSSTVKPAMEPSLLQPGVVIYDGVCH 80
L++ P +V G+ +DVA V AD+ Y +P S K + G+ +
Sbjct: 468 LQSSIPEVNKIVKGIRSDVASVASADEFEYKDPVDGSISK--------------HQGIRY 513
Query: 81 LCHGGVKWVIR 91
L G + V R
Sbjct: 514 LFEDGSRLVFR 524
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,222,946
Number of Sequences: 539616
Number of extensions: 2508461
Number of successful extensions: 7541
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 7536
Number of HSP's gapped (non-prelim): 17
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)