BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031246
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5C5|TRL4_ARATH Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana
GN=At1g07700 PE=2 SV=1
Length = 204
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 69 LRHGKVKGLIDATQGE-SDEDDDLCPVECVREFKTDAEFFKILEKSKETGSLVVVDFYRT 127
L+ G K L E SDE+DDLCPVECV EFKTD E +LEKSKET SLVVVDFYRT
Sbjct: 58 LQRGIAKSLSQENLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRT 117
Query: 128 SCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHN 159
+CGSCKYIEQGFSKLCK SGDQEAPVIFLKHN
Sbjct: 118 ACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHN 149
>sp|Q6YTI3|TRL4_ORYSJ Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0567100 PE=2 SV=1
Length = 214
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 53/63 (84%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
V EFKT+ E ++LE++K TG+LVVVDF+R SCGSCKYIEQGF KLCKGSGD + V+FL
Sbjct: 85 VTEFKTEEELARVLERAKATGALVVVDFFRPSCGSCKYIEQGFMKLCKGSGDHGSSVVFL 144
Query: 157 KHN 159
KHN
Sbjct: 145 KHN 147
>sp|Q5WNE3|NGLY1_CAEBR Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Caenorhabditis briggsae GN=png-1 PE=3 SV=1
Length = 602
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
VRE E +ILEKS ++ L++VDF+ CG C+ I F +L G+ FL
Sbjct: 3 VREVSRLPELNEILEKS-DSNRLIIVDFFANWCGPCRMISPAFERLSMEFGN----ATFL 57
Query: 157 KHNNSIC 163
K N +
Sbjct: 58 KVNTDLA 64
>sp|Q8LEK4|TRL21_ARATH Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana
GN=At4g26160 PE=2 SV=2
Length = 221
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 102 TDAEFFKILEKSKETGS-LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK--- 157
T AE F L K+ G LV+VDFY T CGSC+ + F KLCK + + ++FLK
Sbjct: 99 TSAEQF--LNALKDAGDRLVIVDFYGTWCGSCRAM---FPKLCK-TAKEHPNILFLKVNF 152
Query: 158 -HNNSIC 163
N S+C
Sbjct: 153 DENKSLC 159
>sp|P29448|TRXH1_ARATH Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1
Length = 114
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
L+K+ E+ +LVVVDF + CG C++I F+ L K + V+FLK
Sbjct: 21 LQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN----VLFLK 64
>sp|P22217|TRX1_YEAST Thioredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX1 PE=1 SV=3
Length = 103
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKL 142
V +FKT +EF + + K LVVVDFY T CG CK I K
Sbjct: 2 VTQFKTASEFDSAIAQDK----LVVVDFYATWCGPCKMIAPMIEKF 43
>sp|P80028|TRXH_CHLRE Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3
Length = 113
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
L K KE +VVDF T CG CK I F L S D VIFLK
Sbjct: 18 LAKGKEEHKPIVVDFTATWCGPCKMIAPLFETL---SNDYAGKVIFLK 62
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1
Length = 122
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 105 EFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCK 144
EF + K+KE G +V++DF + CG C++I F++ K
Sbjct: 16 EFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAK 55
>sp|Q0D840|TRXH1_ORYSJ Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1
Length = 122
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 105 EFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCK 144
EF + K+KE G +V++DF + CG C++I F++ K
Sbjct: 16 EFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAK 55
>sp|Q8LCT3|TRL22_ARATH Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana
GN=At4g29670 PE=2 SV=2
Length = 236
Score = 36.6 bits (83), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 105 EFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHN 159
EF L + E LV+V+FY T C SC+ + F KLCK + + ++FLK N
Sbjct: 113 EFLSALSGAGE--RLVIVEFYGTWCASCRAL---FPKLCK-TAVEHPDIVFLKVN 161
>sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0963400 PE=2 SV=2
Length = 168
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 101 KTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQ 149
+T + F ++LEKS++ V+VDFY T CG C+Y+ ++ + GD+
Sbjct: 64 QTFSSFDELLEKSEKP---VLVDFYATWCGPCQYMVPILQEVSEKLGDK 109
>sp|Q96419|TRXH_FAGES Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1
Length = 116
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 102 TDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCK 144
T E+ + +K+K++G L+V+DF + CG C+ I S+L K
Sbjct: 12 TVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAK 54
>sp|Q6XHI1|THIO2_DROYA Thioredoxin-2 OS=Drosophila yakuba GN=Trx-2 PE=3 SV=1
Length = 106
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 113 SKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNNSIC 163
+K +G LVV+DF+ T CG CK I ++L D V+ LK + C
Sbjct: 16 TKASGKLVVLDFFATWCGPCKMISPKLAELSTQYADT---VVVLKVDVDEC 63
>sp|P08629|THIO_CHICK Thioredoxin OS=Gallus gallus GN=TXN PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
LVVVDF T CG CK I+ F LC GD V+F++
Sbjct: 22 LVVVDFSATWCGPCKMIKPFFHSLCDKFGD----VVFIE 56
>sp|Q5TKD8|TRL2_ORYSJ Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os05g0200100 PE=2 SV=1
Length = 216
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 108 KILEKSKETGS-LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHN 159
+ L+ ++ G LV+V+FY T CGSC+ + F +LC+ + + ++FLK N
Sbjct: 89 EFLDALRDAGDRLVIVEFYGTWCGSCRAL---FPRLCRTAVENPD-ILFLKVN 137
>sp|P11232|THIO_RAT Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNNSIC 163
LVVVDF T CG CK I+ F LC D+ + V+FL+ + C
Sbjct: 22 LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFLEVDVDDC 62
>sp|P10639|THIO_MOUSE Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3
Length = 105
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNNSIC 163
LVVVDF T CG CK I+ F LC D+ + V+FL+ + C
Sbjct: 22 LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFLEVDVDDC 62
>sp|P34723|THIO_PENCH Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1
Length = 106
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 91 LCPVECVREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCK 144
+ P++ V E+K EK + VVVDF+ T CG CK I KL +
Sbjct: 3 VTPIKSVAEYK---------EKVTDATGPVVVDFHATWCGPCKAIAPALEKLSE 47
>sp|P29449|TRXH1_TOBAC Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1
Length = 126
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 105 EFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
E+FK K ET LVVVDF + CG C++I + + K + VIFLK
Sbjct: 25 EYFK---KGVETKKLVVVDFTASWCGPCRFIAPILADIAK----KMPHVIFLK 70
>sp|P68176|TRXH_BRAOL Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1
Length = 123
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
L+ +KE+ L+V+DF C C++I F +L K D V+F K
Sbjct: 26 LKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLD----VVFFK 69
>sp|P68177|TRXH1_BRANA Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1
Length = 123
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
L+ +KE+ L+V+DF C C++I F +L K D V+F K
Sbjct: 26 LKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLD----VVFFK 69
>sp|O64432|TRXH_BRARA Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1
Length = 123
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
L+ +KE+ L+V+DF C C++I F +L K D V+F K
Sbjct: 26 LKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLD----VVFFK 69
>sp|Q9V429|THIO2_DROME Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2
Length = 114
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 111 EKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
+ +K +G LVV+DF+ T CG CK I +L D V+ LK
Sbjct: 22 QLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADN---VVVLK 65
>sp|Q42403|TRXH3_ARATH Thioredoxin H3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1
Length = 118
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
L+ + E+ L+V+DF T C C++I F+ L K D V+F K
Sbjct: 20 LKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLD----VVFFK 63
>sp|Q43636|TRXH_RICCO Thioredoxin H-type OS=Ricinus communis PE=3 SV=1
Length = 118
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCK 144
L+K +T L+VVDF + CG C++I ++L K
Sbjct: 21 LQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAK 55
>sp|Q39239|TRXH4_ARATH Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2
Length = 119
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCK 144
L+K+KE+ L+V+DF + C C+ I F+ L K
Sbjct: 21 LDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAK 55
>sp|Q9CAS1|TRXH8_ARATH Thioredoxin H8 OS=Arabidopsis thaliana GN=TRX8 PE=2 SV=1
Length = 148
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 96 CVREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQE 150
C+ E K ++ L K+T L+V++F CG CK +E +L D E
Sbjct: 38 CIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVE 92
>sp|Q6Z4I3|TRH21_ORYSJ Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800
PE=2 SV=1
Length = 138
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 104 AEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLC 143
A++ ++ + K T LVV+DF + CG CK +E F ++
Sbjct: 30 AKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVFKEMA 69
>sp|O83889|THIO_TREPA Thioredoxin OS=Treponema pallidum (strain Nichols) GN=trxA PE=3
SV=1
Length = 105
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYI 135
+ K+ ET LV+VDF+ CGSCK +
Sbjct: 11 VRKTIETNPLVIVDFWAPWCGSCKML 36
>sp|Q07090|TRXH2_TOBAC Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1
Length = 118
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
L+K + L+VVDF + CG CK+I +++L K + V FLK
Sbjct: 20 LQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAK----KMPTVTFLK 63
>sp|Q9UW02|THIO_COPCM Thioredoxin OS=Coprinus comatus PE=1 SV=1
Length = 106
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 112 KSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSG 147
K +G ++++DF+ T CG C+ I F K + G
Sbjct: 13 KLTNSGKIIIIDFWATWCGPCRVISPIFEKFSEKYG 48
>sp|P25372|TRX3_YEAST Thioredoxin-3, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=TRX3 PE=1 SV=1
Length = 127
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 120 VVVDFYRTSCGSCKYIEQGFSKLCKGSGD 148
+V+DFY T CG CK ++ +KL + D
Sbjct: 46 LVIDFYATWCGPCKMMQPHLTKLIQAYPD 74
>sp|Q4JQU6|DNBI_VZVO Major DNA-binding protein OS=Varicella-zoster virus (strain Oka
vaccine) GN=DBP PE=3 SV=1
Length = 1199
Score = 33.5 bits (75), Expect = 0.67, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 10 GALFGG-----RNADGKFSSKVPCMVTSLHRDRTCAKSFCMRTRNRIPFESKST 58
GA GG + G F S++PC + H CA + R R R+P ++T
Sbjct: 474 GAFTGGHGDALKYVTGTFDSEIPCSLCEKHTRPVCAHTTVHRLRQRMPRFGQAT 527
>sp|P09246|DNBI_VZVD Major DNA-binding protein OS=Varicella-zoster virus (strain Dumas)
GN=DBP PE=3 SV=1
Length = 1204
Score = 33.5 bits (75), Expect = 0.67, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 10 GALFGG-----RNADGKFSSKVPCMVTSLHRDRTCAKSFCMRTRNRIPFESKST 58
GA GG + G F S++PC + H CA + R R R+P ++T
Sbjct: 474 GAFTGGHGDALKYVTGTFDSEIPCSLCEKHTRPVCAHTTVHRLRQRMPRFGQAT 527
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 120 VVVDFYRTSCGSCKYIEQGFSKLCKGSGDQ 149
V+VDF+ T CG CK + ++ GDQ
Sbjct: 26 VLVDFWATWCGPCKMVAPVLEEIAAEKGDQ 55
>sp|Q851R5|TRH22_ORYSJ Thioredoxin H2-2 OS=Oryza sativa subsp. japonica GN=Os03g0800700
PE=2 SV=1
Length = 134
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLC 143
L+V+DF T CG C++IE F +
Sbjct: 46 LIVIDFSATWCGPCRFIEPAFKDMA 70
>sp|Q8IFW4|THIOT_DROME Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=2 SV=1
Length = 157
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHN 159
LVV+DFY CG CK I +L D+ V+ LK N
Sbjct: 22 LVVIDFYADWCGPCKIIAPKLDELAHEYSDR---VVVLKVN 59
>sp|Q86VQ3|TXND2_HUMAN Thioredoxin domain-containing protein 2 OS=Homo sapiens GN=TXNDC2
PE=1 SV=4
Length = 553
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 75 KGLIDATQGESDEDDDLCPVECVREFKTDAEFFKILEKS------KETGS-LVVVDFYRT 127
K L +AT S E D L P E EF + IL K KE G LV VDF T
Sbjct: 421 KSLEEAT--PSKEGDILKPEEETMEFPEGDKVKVILSKEDFEASLKEAGERLVAVDFSAT 478
Query: 128 SCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNNSIC 163
CG C+ I F L D V+FL+ + C
Sbjct: 479 WCGPCRTIRPFFHALSVKHED----VVFLEVDADNC 510
>sp|O14463|TRX1_SCHPO Thioredoxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=trx1 PE=3 SV=3
Length = 103
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGD 148
V++ +EF I+ + K LVVVDF+ T CG CK I F + D
Sbjct: 2 VKQVSDSSEFKSIVCQDK----LVVVDFFATWCGPCKAIAPKFEQFSNTYSD 49
>sp|Q9DGI3|THIO_ICTPU Thioredoxin OS=Ictalurus punctatus GN=txn PE=3 SV=1
Length = 107
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLK 157
LVVVDF T CG C+ I F L K Q V+FLK
Sbjct: 22 LVVVDFTATWCGPCQKIGPIFETLSKSEDYQN--VVFLK 58
>sp|P29451|THIO_MACMU Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2
Length = 105
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
V++ ++ A F + L+ + + LVVVDF T CG CK I+ F L ++ + V+FL
Sbjct: 2 VKQIESKAAFQEALDDAGD--KLVVVDFSATWCGPCKMIKPFFHSL----SEKYSNVVFL 55
Query: 157 KHNNSIC 163
+ + C
Sbjct: 56 EVDVDDC 62
>sp|Q9TW67|NGLY1_CAEEL Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Caenorhabditis elegans GN=png-1 PE=1 SV=1
Length = 606
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
V E + E ILE+S + L+++DF+ CG C+ I F + G+ FL
Sbjct: 3 VTEVGSLPELNNILERS-DANRLIIIDFFANWCGPCRMISPIFEQFSAEYGN----ATFL 57
Query: 157 KHN 159
K N
Sbjct: 58 KVN 60
>sp|O22779|TRL13_ARATH Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana
GN=At2g33270 PE=2 SV=1
Length = 273
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNNSIC 163
LVVVDF+ SCG CK + K+ + + + E + + + S+C
Sbjct: 115 LVVVDFFSPSCGGCKALHPKICKIAEKNPEVEFLQVNYEEHRSLC 159
>sp|O65049|TRXH_PICMA Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1
Length = 125
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCK 144
L+++ +T LV VDF T CG C+ I F +L K
Sbjct: 19 LQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSK 53
>sp|Q39362|TRXH2_BRANA Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1
Length = 119
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCK 144
L+ +K++ L+V+DF + C C+ I F+ L K
Sbjct: 21 LDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAK 55
>sp|Q6P902|TXND2_MOUSE Thioredoxin domain-containing protein 2 OS=Mus musculus GN=Txndc2
PE=1 SV=1
Length = 515
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 96 CVREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIF 155
VR K EF ++L+ + E LV VDF CG C+ ++ F L D VIF
Sbjct: 411 LVRVIKDKEEFEEVLKDAGEK--LVAVDFSAAWCGPCRMMKPLFHSLSLKHED----VIF 464
Query: 156 LKHNNSIC 163
L+ + C
Sbjct: 465 LEVDTEDC 472
>sp|Q38879|TRXH2_ARATH Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2
Length = 133
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLC 143
V +F + A + + KE+ L+VVDF + CG C+ IE +
Sbjct: 27 VLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMA 73
>sp|Q5XHX6|TXND2_RAT Thioredoxin domain-containing protein 2 OS=Rattus norvegicus
GN=Txndc2 PE=1 SV=2
Length = 550
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 96 CVREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIF 155
VR K EF ++L+ + E LV VDF CG C+ + F L D VIF
Sbjct: 446 MVRVIKDKEEFEEVLKDAGE--KLVAVDFSAPWCGPCRKMRPHFHSLSLKHED----VIF 499
Query: 156 LKHNNSIC 163
L+ + C
Sbjct: 500 LEVDTEDC 507
>sp|P08628|THIO_RABIT Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 SV=2
Length = 105
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKL 142
V++ ++ + F ++L+ + + LVVVDF T CG CK I+ F L
Sbjct: 2 VKQIESKSAFQEVLDSAGD--KLVVVDFSATWCGPCKMIKPFFHAL 45
>sp|P10599|THIO_HUMAN Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3
Length = 105
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNNSIC 163
LVVVDF T CG CK I+ F L ++ + VIFL+ + C
Sbjct: 22 LVVVDFSATWCGPCKMIKPFFHSL----SEKYSNVIFLEVDVDDC 62
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,428,416
Number of Sequences: 539616
Number of extensions: 2333791
Number of successful extensions: 5873
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 5804
Number of HSP's gapped (non-prelim): 107
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)