BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031248
MMLTGMVFLSWGRPTPQEQKACIDKSGVFNYDTKYKGATAKPVACLKEDQGLSKDGFLLN
HARVLVGSGLETYEKGKTALKTWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVTLPL
QIVYVNESIRKKKTAASFGFGSGTLQGHLLVSTCLHIIIVNSL

High Scoring Gene Products

Symbol, full name Information P value
AT2G17695 protein from Arabidopsis thaliana 1.5e-53
DDB_G0271742
UPF0548 family protein 		gene from Dictyostelium discoideum 1.4e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031248
        (163 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716645 - symbol:AT2G17695 "AT2G17695" spec...   554  1.5e-53   1
DICTYBASE|DDB_G0271742 - symbol:DDB_G0271742 "UPF0548 fam...   130  1.4e-08   1


>TAIR|locus:1005716645 [details] [associations]
            symbol:AT2G17695 "AT2G17695" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009941 EMBL:AK118331
            EMBL:BT005572 IPI:IPI00543664 RefSeq:NP_001118341.1
            RefSeq:NP_001189543.1 RefSeq:NP_849965.1 UniGene:At.47048
            PaxDb:Q8GXB1 PRIDE:Q8GXB1 EnsemblPlants:AT2G17695.1
            EnsemblPlants:AT2G17695.2 EnsemblPlants:AT2G17695.3 GeneID:816277
            KEGG:ath:AT2G17695 TAIR:At2g17695 eggNOG:COG4762
            HOGENOM:HOG000237942 InParanoid:Q8GXB1 OMA:FLINHAR PhylomeDB:Q8GXB1
            ProtClustDB:CLSN2690753 Genevestigator:Q8GXB1 InterPro:IPR018960
            Pfam:PF09348 Uniprot:Q8GXB1
        Length = 205

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 95/145 (65%), Positives = 121/145 (83%)

Query:     6 MVFLSWGRPTPQEQKACIDKSGVFNYDTKYKGATAKPVACLKEDQGLSKDGFLLNHARVL 65
             MVFLSWGRP+ ++Q+  I+K+G FNYD KY+G +++ +A LKED  + KDGFL+NHARVL
Sbjct:     1 MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query:    66 VGSGLETYEKGKTALKTWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVTLPLQIVYV 125
             VGSG E+YEKGK AL+ W+HFG++WAFVDP TP++ G KFC+CVKE LPWV LPLQ+VYV
Sbjct:    61 VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query:   126 NESIRKKKTAASFGFGSGTLQGHLL 150
             +ES + +K  A FG+GSGTLQGHLL
Sbjct:   121 DESRKSRKGPAHFGYGSGTLQGHLL 145


>DICTYBASE|DDB_G0271742 [details] [associations]
            symbol:DDB_G0271742 "UPF0548 family protein"
            species:44689 "Dictyostelium discoideum" [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            dictyBase:DDB_G0271742 EMBL:AAFI02000006 eggNOG:COG4762 OMA:FLINHAR
            InterPro:IPR018960 Pfam:PF09348 RefSeq:XP_645536.1
            EnsemblProtists:DDB0305139 GeneID:8618165 KEGG:ddi:DDB_G0271742
            Uniprot:Q86JL6
        Length = 216

 Score = 130 (50.8 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 28/94 (29%), Positives = 51/94 (54%)

Query:    57 FLLNHARVLVGSGLETYEKGKTALKTWRHFGLNWA-FVDPKTPIQNGVKFCVCVKEFLPW 115
             F ++  ++ +G+G+E ++K   ALK W+HF L+W  F    TPI  G    +  K+   W
Sbjct:    50 FDVDQVKIQLGTGVECFQKAVAALKQWKHFDLDWVDFYFKNTPIAVGETVGILSKQVGFW 109

Query:   116 VTLPLQIVYVNESIRKKKTAASFGFGSGTLQGHL 149
             +    +I Y+ +   ++  +  FG+  GTL+ H+
Sbjct:   110 ILSFARINYLYDG-DQEDGSIKFGYSYGTLKDHV 142


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      163       163   0.00084  107 3  11 22  0.49    31
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  163 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.07u 0.14s 16.21t   Elapsed:  00:00:01
  Total cpu time:  16.07u 0.14s 16.21t   Elapsed:  00:00:01
  Start:  Fri May 10 18:19:54 2013   End:  Fri May 10 18:19:55 2013

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