Query 031251
Match_columns 163
No_of_seqs 100 out of 116
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 18:16:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a4h_A Selenoprotein SEP15; re 100.0 4.1E-36 1.4E-40 230.8 6.6 88 71-159 13-101 (126)
2 2a2p_A Selenoprotein M, SELM p 100.0 5.5E-31 1.9E-35 203.3 8.6 80 78-157 13-93 (129)
3 1s3a_A NADH-ubiquinone oxidore 96.1 0.021 7E-07 41.2 7.2 71 84-155 22-99 (102)
4 3lor_A Thiol-disulfide isomera 93.6 0.093 3.2E-06 37.4 4.7 65 93-158 81-158 (160)
5 3gl3_A Putative thiol:disulfid 90.9 0.13 4.5E-06 36.3 2.6 65 95-159 74-146 (152)
6 2ju5_A Thioredoxin disulfide i 90.3 0.48 1.6E-05 34.5 5.3 38 119-156 116-153 (154)
7 3raz_A Thioredoxin-related pro 89.6 0.28 9.6E-06 34.8 3.5 66 92-158 66-143 (151)
8 3eur_A Uncharacterized protein 89.5 0.27 9.3E-06 34.5 3.3 54 95-152 80-142 (142)
9 1lu4_A Soluble secreted antige 89.4 0.23 8E-06 33.9 2.8 60 94-154 67-135 (136)
10 3fkf_A Thiol-disulfide oxidore 89.3 0.16 5.6E-06 35.3 1.9 58 95-156 80-147 (148)
11 1xzo_A BSSCO, hypothetical pro 88.9 1.1 3.8E-05 32.1 6.3 37 119-155 135-172 (174)
12 2b5x_A YKUV protein, TRXY; thi 88.8 0.77 2.6E-05 31.6 5.2 63 94-157 78-147 (148)
13 1zzo_A RV1677; thioredoxin fol 88.5 0.25 8.5E-06 33.6 2.4 60 94-155 68-135 (136)
14 2kuc_A Putative disulphide-iso 88.2 1 3.5E-05 30.9 5.5 40 119-159 86-125 (130)
15 2f9s_A Thiol-disulfide oxidore 88.2 0.92 3.2E-05 31.9 5.3 64 95-159 72-142 (151)
16 3ewl_A Uncharacterized conserv 88.1 0.47 1.6E-05 33.0 3.7 57 95-155 76-141 (142)
17 3eyt_A Uncharacterized protein 87.8 2.2 7.4E-05 30.0 7.2 65 93-158 79-155 (158)
18 3me7_A Putative uncharacterize 87.8 2.1 7.1E-05 31.6 7.3 64 96-159 80-166 (170)
19 1jfu_A Thiol:disulfide interch 87.5 0.76 2.6E-05 33.7 4.7 65 95-159 107-184 (186)
20 3ia1_A THIO-disulfide isomeras 86.8 0.54 1.8E-05 33.2 3.4 64 94-158 74-147 (154)
21 2l57_A Uncharacterized protein 86.7 1.6 5.6E-05 29.8 5.8 40 119-159 82-121 (126)
22 2ywi_A Hypothetical conserved 85.5 0.6 2.1E-05 34.5 3.2 64 95-158 99-177 (196)
23 3hxs_A Thioredoxin, TRXP; elec 84.9 1.7 5.8E-05 30.3 5.2 37 118-156 104-140 (141)
24 2cvb_A Probable thiol-disulfid 84.3 0.5 1.7E-05 34.8 2.3 65 94-158 84-162 (188)
25 2l5l_A Thioredoxin; structural 83.7 1.5 5.3E-05 30.7 4.6 39 118-158 91-129 (136)
26 3fw2_A Thiol-disulfide oxidore 83.4 0.57 2E-05 33.1 2.2 57 95-155 82-148 (150)
27 3fk8_A Disulphide isomerase; A 83.0 1.7 5.8E-05 30.1 4.5 36 118-153 90-131 (133)
28 2lrn_A Thiol:disulfide interch 82.8 1.2 4.2E-05 31.4 3.8 60 94-157 74-143 (152)
29 2lus_A Thioredoxion; CR-Trp16, 83.2 0.26 8.8E-06 34.2 0.0 59 95-154 74-142 (143)
30 3lwa_A Secreted thiol-disulfid 82.4 1.8 6.2E-05 31.6 4.7 61 94-155 111-181 (183)
31 1kng_A Thiol:disulfide interch 81.9 2 6.9E-05 30.0 4.6 60 95-155 85-152 (156)
32 3dml_A Putative uncharacterize 81.7 1.3 4.4E-05 32.5 3.6 44 110-155 67-110 (116)
33 3kcm_A Thioredoxin family prot 81.5 1.5 5.1E-05 30.7 3.8 64 94-157 74-145 (154)
34 2lja_A Putative thiol-disulfid 80.5 0.43 1.5E-05 33.5 0.6 64 95-159 76-147 (152)
35 2dlx_A UBX domain-containing p 79.3 1.7 5.7E-05 32.8 3.6 39 115-155 97-136 (153)
36 2dj3_A Protein disulfide-isome 78.9 1.5 5.1E-05 30.2 3.0 44 115-159 77-122 (133)
37 3ha9_A Uncharacterized thiored 78.8 0.52 1.8E-05 33.8 0.6 59 94-155 98-164 (165)
38 3or5_A Thiol:disulfide interch 78.8 3.2 0.00011 29.2 4.8 64 95-159 80-155 (165)
39 2wz9_A Glutaredoxin-3; protein 78.5 4 0.00014 29.3 5.4 37 119-158 85-121 (153)
40 2ggt_A SCO1 protein homolog, m 78.2 1.1 3.8E-05 31.7 2.2 34 121-155 128-161 (164)
41 2voc_A Thioredoxin; electron t 76.6 4.2 0.00014 27.2 4.7 39 119-159 71-109 (112)
42 2b1k_A Thiol:disulfide interch 76.5 1.4 4.8E-05 31.5 2.4 61 95-156 93-161 (168)
43 4euy_A Uncharacterized protein 76.0 3.7 0.00013 27.1 4.3 40 114-155 66-105 (105)
44 2l5o_A Putative thioredoxin; s 76.0 4.3 0.00015 28.2 4.8 66 94-160 74-146 (153)
45 2h30_A Thioredoxin, peptide me 75.7 4.9 0.00017 28.2 5.1 40 118-158 120-159 (164)
46 2vm1_A Thioredoxin, thioredoxi 75.3 3.8 0.00013 27.2 4.2 37 119-158 81-117 (118)
47 3zzx_A Thioredoxin; oxidoreduc 75.1 0.55 1.9E-05 32.6 -0.2 32 119-153 73-104 (105)
48 3f9u_A Putative exported cytoc 75.0 2 7E-05 31.2 2.9 38 118-155 129-166 (172)
49 3aps_A DNAJ homolog subfamily 74.5 2 6.7E-05 29.1 2.6 44 119-162 75-120 (122)
50 3erw_A Sporulation thiol-disul 74.3 2.9 9.9E-05 28.5 3.4 58 93-151 81-145 (145)
51 4evm_A Thioredoxin family prot 74.2 6.4 0.00022 26.0 5.1 58 94-152 71-136 (138)
52 2vim_A Thioredoxin, TRX; thior 73.2 5.5 0.00019 25.6 4.5 33 119-154 72-104 (104)
53 3cmi_A Peroxiredoxin HYR1; thi 73.2 2.7 9.2E-05 30.5 3.2 61 95-156 84-169 (171)
54 1mek_A Protein disulfide isome 73.0 1.3 4.6E-05 29.3 1.4 39 118-157 80-119 (120)
55 2e0q_A Thioredoxin; electron t 72.5 5.9 0.0002 25.2 4.5 35 119-155 69-103 (104)
56 3d22_A TRXH4, thioredoxin H-ty 71.7 5.3 0.00018 27.7 4.4 40 119-161 99-138 (139)
57 2rli_A SCO2 protein homolog, m 71.7 3.3 0.00011 29.5 3.3 37 119-156 129-165 (171)
58 2djj_A PDI, protein disulfide- 71.6 4.6 0.00016 27.0 3.9 38 119-157 81-119 (121)
59 2dml_A Protein disulfide-isome 70.6 3.6 0.00012 28.0 3.3 40 118-158 88-127 (130)
60 2yzu_A Thioredoxin; redox prot 70.4 6.4 0.00022 25.3 4.3 37 118-156 71-107 (109)
61 3m9j_A Thioredoxin; oxidoreduc 70.3 6.2 0.00021 25.5 4.2 33 119-154 73-105 (105)
62 3u5r_E Uncharacterized protein 70.3 4.1 0.00014 31.2 3.8 64 95-158 112-190 (218)
63 3f3q_A Thioredoxin-1; His TAG, 69.9 6.8 0.00023 26.2 4.5 33 119-154 77-109 (109)
64 3kh7_A Thiol:disulfide interch 69.6 7.1 0.00024 28.6 4.9 60 95-155 100-167 (176)
65 3cxg_A Putative thioredoxin; m 69.5 3.9 0.00013 28.8 3.3 38 119-156 92-130 (133)
66 2dj1_A Protein disulfide-isome 69.1 13 0.00043 25.5 5.9 37 119-158 91-127 (140)
67 2trx_A Thioredoxin; electron t 68.5 7.4 0.00025 25.3 4.3 35 119-155 74-108 (108)
68 4hde_A SCO1/SENC family lipopr 68.4 8.2 0.00028 28.4 5.0 36 119-154 133-169 (170)
69 2fwh_A Thiol:disulfide interch 67.5 4.6 0.00016 28.2 3.3 36 118-153 90-126 (134)
70 1oaz_A Thioredoxin 1; immune s 66.7 2.7 9.1E-05 29.4 1.9 36 118-155 88-123 (123)
71 3dwv_A Glutathione peroxidase- 66.5 6.4 0.00022 29.2 4.1 62 94-156 98-184 (187)
72 3tco_A Thioredoxin (TRXA-1); d 66.3 7.8 0.00027 25.0 4.1 36 118-155 74-109 (109)
73 3qfa_C Thioredoxin; protein-pr 66.1 2 6.8E-05 29.4 1.1 33 119-154 84-116 (116)
74 1gh2_A Thioredoxin-like protei 66.0 5.2 0.00018 26.3 3.2 33 119-154 74-106 (107)
75 2vup_A Glutathione peroxidase- 65.8 4.7 0.00016 29.9 3.2 62 95-157 101-187 (190)
76 2ppt_A Thioredoxin-2; thiredox 65.8 1.9 6.4E-05 31.6 1.0 38 118-157 117-154 (155)
77 2ls5_A Uncharacterized protein 69.1 1.3 4.4E-05 31.5 0.0 55 96-152 82-145 (159)
78 3gnj_A Thioredoxin domain prot 65.4 6.9 0.00023 25.5 3.7 36 118-155 75-110 (111)
79 3uvt_A Thioredoxin domain-cont 64.7 12 0.00042 24.2 4.8 34 118-153 77-110 (111)
80 3hdc_A Thioredoxin family prot 63.4 7.2 0.00025 27.6 3.7 64 95-158 84-155 (158)
81 3p2a_A Thioredoxin 2, putative 63.2 9.9 0.00034 26.7 4.4 39 118-158 108-146 (148)
82 3die_A Thioredoxin, TRX; elect 62.9 11 0.00036 24.3 4.2 34 119-154 73-106 (106)
83 1sen_A Thioredoxin-like protei 62.2 3.2 0.00011 30.5 1.7 38 119-156 103-149 (164)
84 2k6v_A Putative cytochrome C o 62.0 4.3 0.00015 28.8 2.3 37 117-154 135-172 (172)
85 2vlu_A Thioredoxin, thioredoxi 61.9 12 0.0004 25.0 4.4 35 119-156 87-121 (122)
86 2l6c_A Thioredoxin; oxidoreduc 61.8 11 0.00038 25.1 4.3 36 119-157 72-108 (110)
87 2es7_A Q8ZP25_salty, putative 61.0 9.5 0.00032 27.8 4.1 39 119-159 91-129 (142)
88 1thx_A Thioredoxin, thioredoxi 60.7 13 0.00043 24.3 4.3 37 118-156 78-114 (115)
89 1dby_A Chloroplast thioredoxin 60.5 20 0.00067 23.1 5.3 34 119-154 73-106 (107)
90 1w4v_A Thioredoxin, mitochondr 60.2 12 0.00042 25.2 4.3 34 119-154 85-118 (119)
91 1ep7_A Thioredoxin CH1, H-type 60.0 12 0.00042 24.4 4.2 34 119-155 78-111 (112)
92 3apq_A DNAJ homolog subfamily 59.1 10 0.00036 28.5 4.1 41 119-161 168-208 (210)
93 1wmj_A Thioredoxin H-type; str 58.3 3.4 0.00012 28.0 1.2 39 119-160 89-127 (130)
94 2p31_A CL683, glutathione pero 58.1 3.9 0.00013 30.1 1.5 59 95-154 102-180 (181)
95 1nho_A Probable thioredoxin; b 58.0 2.5 8.5E-05 26.5 0.3 30 119-155 55-85 (85)
96 2j23_A Thioredoxin; immune pro 57.9 16 0.00054 24.8 4.6 33 119-154 88-120 (121)
97 1syr_A Thioredoxin; SGPP, stru 57.9 15 0.00052 24.3 4.4 33 119-154 79-111 (112)
98 1nsw_A Thioredoxin, TRX; therm 57.7 11 0.00038 24.3 3.6 34 119-154 71-104 (105)
99 2p5q_A Glutathione peroxidase 57.6 13 0.00044 26.1 4.2 61 95-156 85-169 (170)
100 3idv_A Protein disulfide-isome 57.2 14 0.00048 27.6 4.6 37 119-158 204-240 (241)
101 1ti3_A Thioredoxin H, PTTRXH1; 56.9 11 0.00037 24.6 3.5 35 118-155 78-112 (113)
102 1v98_A Thioredoxin; oxidoreduc 56.7 16 0.00054 25.3 4.5 36 119-156 104-139 (140)
103 2o8v_B Thioredoxin 1; disulfid 56.5 5.6 0.00019 27.8 2.0 35 119-155 94-128 (128)
104 1x5e_A Thioredoxin domain cont 55.6 11 0.00037 25.5 3.4 36 119-157 77-112 (126)
105 1x5d_A Protein disulfide-isome 55.6 15 0.00052 24.7 4.2 36 119-156 83-118 (133)
106 4fo5_A Thioredoxin-like protei 55.3 1.9 6.4E-05 30.1 -0.7 71 78-152 60-142 (143)
107 2i4a_A Thioredoxin; acidophIle 55.0 19 0.00065 23.0 4.4 35 118-154 73-107 (107)
108 1xwb_A Thioredoxin; dimerizati 54.2 19 0.00064 23.0 4.3 34 118-154 73-106 (106)
109 2dbc_A PDCL2, unnamed protein 53.8 17 0.00059 25.4 4.3 35 118-153 79-119 (135)
110 1fo5_A Thioredoxin; disulfide 52.6 13 0.00045 22.9 3.2 29 119-154 56-85 (85)
111 2lst_A Thioredoxin; structural 57.8 2.9 0.0001 28.6 0.0 46 114-159 73-120 (130)
112 1t00_A Thioredoxin, TRX; redox 52.5 16 0.00056 23.8 3.8 35 119-155 77-111 (112)
113 3hcz_A Possible thiol-disulfid 52.3 3.3 0.00011 28.4 0.2 52 96-151 78-139 (148)
114 2djk_A PDI, protein disulfide- 51.9 3.5 0.00012 29.1 0.3 34 120-154 79-114 (133)
115 1xfl_A Thioredoxin H1; AT3G510 51.7 21 0.00071 24.5 4.4 33 119-154 91-123 (124)
116 3d6i_A Monothiol glutaredoxin- 51.7 16 0.00054 24.0 3.6 34 119-155 76-109 (112)
117 2bmx_A Alkyl hydroperoxidase C 50.8 23 0.00078 26.2 4.8 37 119-155 131-170 (195)
118 2i1u_A Thioredoxin, TRX, MPT46 50.8 16 0.00054 24.2 3.6 36 119-156 84-119 (121)
119 2v1m_A Glutathione peroxidase; 50.7 13 0.00043 26.2 3.2 34 121-155 134-167 (169)
120 3h79_A Thioredoxin-like protei 50.2 22 0.00075 24.1 4.3 35 119-153 92-126 (127)
121 2xc2_A Thioredoxinn; oxidoredu 49.8 23 0.00077 23.5 4.2 33 119-154 85-117 (117)
122 2i3y_A Epididymal secretory gl 49.8 15 0.00052 28.6 3.8 35 121-156 178-212 (215)
123 3q6o_A Sulfhydryl oxidase 1; p 49.7 46 0.0016 25.4 6.5 40 119-158 89-130 (244)
124 2hyx_A Protein DIPZ; thioredox 48.7 8.3 0.00029 32.7 2.2 59 96-155 134-199 (352)
125 3drn_A Peroxiredoxin, bacterio 48.3 6.6 0.00023 28.1 1.4 60 92-151 72-145 (161)
126 3kij_A Probable glutathione pe 48.1 14 0.00047 27.0 3.1 60 95-154 91-173 (180)
127 2r37_A Glutathione peroxidase 47.1 17 0.00057 28.0 3.6 34 121-155 160-193 (207)
128 1r26_A Thioredoxin; redox-acti 47.0 20 0.00069 24.8 3.7 34 119-155 90-123 (125)
129 3gkn_A Bacterioferritin comigr 47.0 29 0.00099 24.4 4.6 61 93-153 79-160 (163)
130 2yzh_A Probable thiol peroxida 46.9 26 0.00091 25.1 4.5 34 120-153 133-170 (171)
131 3emx_A Thioredoxin; structural 46.1 15 0.00053 25.5 3.0 39 118-158 91-129 (135)
132 2yj7_A LPBCA thioredoxin; oxid 51.7 4.3 0.00015 26.0 0.0 39 114-154 68-106 (106)
133 3q6o_A Sulfhydryl oxidase 1; p 45.6 58 0.002 24.8 6.5 49 105-154 179-239 (244)
134 4g2e_A Peroxiredoxin; redox pr 45.3 39 0.0013 24.2 5.2 57 95-151 76-154 (157)
135 3o2i_A Uncharacterized protein 44.7 33 0.0011 25.3 4.6 52 109-160 15-70 (125)
136 3dxb_A Thioredoxin N-terminall 44.6 13 0.00046 28.3 2.7 39 119-159 84-122 (222)
137 3ed3_A Protein disulfide-isome 44.4 29 0.00099 28.1 4.8 38 118-155 230-267 (298)
138 1fb6_A Thioredoxin M; electron 43.9 30 0.001 22.0 4.0 35 118-154 71-105 (105)
139 2b7k_A SCO1 protein; metalloch 43.8 24 0.00081 26.4 3.9 32 119-151 144-175 (200)
140 3ixr_A Bacterioferritin comigr 43.8 35 0.0012 24.9 4.8 59 94-152 96-175 (179)
141 3ph9_A Anterior gradient prote 43.6 15 0.00052 27.3 2.8 41 118-158 99-148 (151)
142 3evi_A Phosducin-like protein 43.2 31 0.0011 24.3 4.3 34 119-153 73-112 (118)
143 2jsy_A Probable thiol peroxida 43.0 33 0.0011 24.2 4.5 35 120-154 128-166 (167)
144 2pu9_C TRX-F, thioredoxin F-ty 41.5 44 0.0015 21.7 4.7 33 119-154 78-110 (111)
145 1faa_A Thioredoxin F; electron 41.4 38 0.0013 22.5 4.3 33 119-154 91-123 (124)
146 2obi_A PHGPX, GPX-4, phospholi 40.2 19 0.00065 26.2 2.8 32 121-153 151-182 (183)
147 3qou_A Protein YBBN; thioredox 39.1 46 0.0016 25.8 5.1 34 119-154 80-113 (287)
148 3ul3_B Thioredoxin, thioredoxi 35.9 39 0.0013 22.9 3.7 33 118-152 95-127 (128)
149 3hz4_A Thioredoxin; NYSGXRC, P 35.6 47 0.0016 23.0 4.2 36 119-156 78-113 (140)
150 1we0_A Alkyl hydroperoxide red 35.6 38 0.0013 24.6 3.9 37 119-155 118-157 (187)
151 1ttz_A Conserved hypothetical 34.3 45 0.0015 22.3 3.8 32 120-157 48-79 (87)
152 4f9z_D Endoplasmic reticulum r 33.6 59 0.002 24.7 4.8 37 120-156 190-226 (227)
153 2h01_A 2-Cys peroxiredoxin; th 33.6 44 0.0015 24.4 3.9 36 119-154 120-158 (192)
154 3bs7_A Protein aveugle; sterIl 33.5 18 0.0006 23.8 1.5 16 137-152 2-17 (78)
155 1zma_A Bacterocin transport ac 33.0 42 0.0014 22.3 3.4 31 119-151 87-117 (118)
156 2oe3_A Thioredoxin-3; electron 32.8 54 0.0018 21.9 4.0 31 119-152 83-113 (114)
157 2f51_A Thioredoxin; electron t 32.3 47 0.0016 22.3 3.7 39 119-157 76-115 (118)
158 1xvw_A Hypothetical protein RV 32.3 9.8 0.00034 26.7 0.1 56 94-149 81-151 (160)
159 1zye_A Thioredoxin-dependent p 32.2 60 0.0021 24.7 4.6 36 119-154 146-184 (220)
160 1xvq_A Thiol peroxidase; thior 31.9 34 0.0012 24.7 3.1 32 121-152 130-162 (175)
161 2gs3_A PHGPX, GPX-4, phospholi 31.9 25 0.00087 25.6 2.3 32 121-153 153-184 (185)
162 1qmv_A Human thioredoxin perox 30.9 68 0.0023 23.5 4.6 36 119-154 124-162 (197)
163 2f8a_A Glutathione peroxidase 30.5 40 0.0014 25.6 3.4 34 121-155 174-207 (208)
164 2r2j_A Thioredoxin domain-cont 29.1 67 0.0023 26.5 4.7 38 120-158 83-120 (382)
165 2b5e_A Protein disulfide-isome 28.5 55 0.0019 27.9 4.2 39 119-158 431-470 (504)
166 3bs5_B Connector enhancer of k 28.5 23 0.00078 23.3 1.4 17 137-153 3-19 (80)
167 3idv_A Protein disulfide-isome 28.0 65 0.0022 23.8 4.1 36 119-157 89-124 (241)
168 1pk1_B Sex COMB on midleg CG94 27.9 24 0.00083 24.4 1.5 18 136-153 12-29 (89)
169 2c0d_A Thioredoxin peroxidase 27.7 78 0.0027 24.3 4.6 36 119-154 145-183 (221)
170 3bq7_A Diacylglycerol kinase d 27.7 25 0.00086 23.4 1.5 17 136-152 5-21 (81)
171 2f3n_A SH3 and multiple ankyri 26.9 27 0.00091 23.0 1.5 16 137-152 1-16 (76)
172 3iv4_A Putative oxidoreductase 26.8 7.4 0.00025 28.4 -1.4 58 92-150 41-111 (112)
173 1psq_A Probable thiol peroxida 26.1 88 0.003 22.0 4.4 57 95-151 86-161 (163)
174 1chl_A Chlorotoxin; neurotoxin 26.0 19 0.00066 21.7 0.6 17 52-68 6-22 (36)
175 2qsi_A Putative hydrogenase ex 25.9 5.6 0.00019 29.9 -2.3 38 115-154 85-122 (137)
176 4gqc_A Thiol peroxidase, perox 25.6 35 0.0012 24.8 2.1 58 95-152 79-157 (164)
177 1wou_A Thioredoxin -related pr 25.1 41 0.0014 22.8 2.3 33 117-152 90-122 (123)
178 1a8l_A Protein disulfide oxido 24.5 1E+02 0.0034 22.7 4.6 35 119-155 192-226 (226)
179 3p7x_A Probable thiol peroxida 24.2 96 0.0033 21.9 4.3 58 94-151 88-164 (166)
180 2gle_A Neurabin-1; SAM domain, 24.1 17 0.00057 23.6 0.1 16 137-152 3-18 (74)
181 1n8j_A AHPC, alkyl hydroperoxi 24.0 1.1E+02 0.0037 22.4 4.6 35 120-154 118-155 (186)
182 1zof_A Alkyl hydroperoxide-red 23.9 68 0.0023 23.5 3.5 36 119-154 122-160 (198)
183 3ira_A Conserved protein; meth 23.8 60 0.0021 24.7 3.2 37 116-152 101-141 (173)
184 1sji_A Calsequestrin 2, calseq 23.4 89 0.003 25.2 4.4 39 121-162 91-129 (350)
185 1o6d_A Hypothetical UPF0247 pr 23.3 1E+02 0.0035 23.8 4.4 52 95-154 15-91 (163)
186 3ed3_A Protein disulfide-isome 23.0 1.2E+02 0.0041 24.4 5.0 22 137-158 124-145 (298)
187 2qgv_A Hydrogenase-1 operon pr 22.7 12 0.0004 28.2 -1.1 41 115-157 87-127 (140)
188 3t58_A Sulfhydryl oxidase 1; o 22.5 1E+02 0.0035 27.3 4.9 39 119-158 89-130 (519)
189 2i81_A 2-Cys peroxiredoxin; st 22.3 1.2E+02 0.004 23.0 4.6 36 119-154 141-179 (213)
190 1kw4_A Polyhomeotic; SAM domai 22.1 35 0.0012 23.5 1.4 17 137-153 13-29 (89)
191 3f8u_A Protein disulfide-isome 22.1 99 0.0034 25.9 4.5 39 119-157 425-463 (481)
192 3uem_A Protein disulfide-isome 20.9 1.1E+02 0.0037 24.5 4.4 38 119-157 321-359 (361)
193 3ec3_A Protein disulfide-isome 20.8 1.4E+02 0.0046 23.1 4.8 36 120-156 194-229 (250)
194 1v85_A Similar to ring finger 20.7 41 0.0014 23.0 1.5 17 136-152 15-31 (91)
195 3ga4_A Dolichyl-diphosphooligo 20.6 1.3E+02 0.0043 23.1 4.5 39 119-157 103-155 (178)
196 4e74_A Plexin-A4; RBD, structu 20.1 87 0.003 23.1 3.3 35 106-143 60-94 (117)
No 1
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=100.00 E-value=4.1e-36 Score=230.76 Aligned_cols=88 Identities=31% Similarity=0.647 Sum_probs=81.9
Q ss_pred cccccccccceeEEEEecccccccchhhhhhhhhhcc-CCCeEEEEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHH
Q 031251 71 DDSMSKITYSGAILEACMRKLVFYPEIVGFIEEEKDK-FPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQF 149 (163)
Q Consensus 71 ~~~~~k~~y~~A~LevC~ckL~~~PeVk~FV~~~~~~-f~~L~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~ef 149 (163)
+....| +||+|+||||+|||++|||||+||++++++ ||||+|+|++|+||+|+|+|++|+++|+|+|++|+||+|+||
T Consensus 13 ~~~~~k-~Ya~A~LEvC~CKL~~yPeVk~FI~~d~~~~fpnL~vkyv~Ga~P~LvLlD~~Ge~~E~I~IekW~tD~I~ef 91 (126)
T 2a4h_A 13 QPAAQR-TYAKAILEVCTCKFRAYPQIQAFIQSGRPAKFPNLQIKYVRGLDPVVKLLDASGKVQETLSITKWNTDTVEEF 91 (126)
T ss_dssp CCCSSC-CCSCBEEECCSCTTTTCTTHHHHHHHTTGGGCTTBCCCCCSSCCCEEEECCSSSCCSEEEECSSSSCSHHHHH
T ss_pred cchhhc-ccCceEEEEcchhhhcCHHHHHHHccchhhhCCceEEEEecCCCCEEEEecCCCCEeeEeccccCCHHHHHHH
Confidence 445666 899999999999999999999999975555 999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCcc
Q 031251 150 LQEKVKPTSA 159 (163)
Q Consensus 150 L~~kL~~~~~ 159 (163)
|.+||+|..+
T Consensus 92 L~ekL~~~~~ 101 (126)
T 2a4h_A 92 FETHLAKDGA 101 (126)
T ss_dssp HHHHSCCCCS
T ss_pred HHHHhhhhcC
Confidence 9999999765
No 2
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=99.97 E-value=5.5e-31 Score=203.29 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=76.7
Q ss_pred ccceeEEEEe-cccccccchhhhhhhhhhccCCCeEEEEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 78 TYSGAILEAC-MRKLVFYPEIVGFIEEEKDKFPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 78 ~y~~A~LevC-~ckL~~~PeVk~FV~~~~~~f~~L~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
+|++|+|||| +|||++|||||+||+++++.|+||+|+|++|++|+|+|+|++|+++|+|+|++|++|+|++||.+|-=.
T Consensus 13 ~yarA~lEvC~~CkL~~~PeIk~FIk~d~~~y~~v~Vkyi~Ga~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e~GF~ 92 (129)
T 2a2p_A 13 GLARGRVETCGGCQLNRLKEVKAFVTEDIQLYHNLVMKHLPGADPELVLLSRNYQELERIPLSQMTRDEINALVQELGFY 92 (129)
T ss_dssp TCCEEEEEEETTCCCSTTHHHHHHTTTHHHHBTTEEEEEESSCCCEEEEECSSSCCCEEEECSSSCHHHHHHHHHHHTCC
T ss_pred ccceEEEEECCCcccccchhHHHHHhCchhhcCceeEEEeCCCCCEEEEecCCCCEEEEeecccCCHHHHHHHHHHcCCc
Confidence 8999999999 899999999999999999999999999999999999999999999999999999999999999998543
Q ss_pred C
Q 031251 157 T 157 (163)
Q Consensus 157 ~ 157 (163)
.
T Consensus 93 r 93 (129)
T 2a2p_A 93 R 93 (129)
T ss_dssp B
T ss_pred c
Confidence 3
No 3
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=96.11 E-value=0.021 Score=41.18 Aligned_cols=71 Identities=15% Similarity=0.235 Sum_probs=54.6
Q ss_pred EEEecccccc-cchhhhhhhhhhcc----CCCe--EEEEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 84 LEACMRKLVF-YPEIVGFIEEEKDK----FPTV--RVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 84 LevC~ckL~~-~PeVk~FV~~~~~~----f~~L--~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
|.+--|+.+. ...+.+||+.+.+. -|++ .|+...|..|.|+....+|+ ...|++++.+.++|.+-|.....
T Consensus 22 l~~~yc~~~~sS~G~R~Fl~~~l~~~k~~NP~v~i~v~~~~~~~P~i~a~Y~~G~-ek~i~l~n~s~~eI~~~l~~l~~ 99 (102)
T 1s3a_A 22 IRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQ-ETNVPLNNFSADQVTRALENVLS 99 (102)
T ss_dssp EEEECCSSSCCCHHHHHHHHHTHHHHHHHSTTCCEEEECCCSSSCEEEEEESSCC-EEEEECTTCCHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCchhHHHHHHHhhHHHHHHCCCceEEEEECCCCCCEEEEEECCCC-EEEEECCCCCHHHHHHHHHHHHh
Confidence 3333355554 57899999966444 4774 45677788999999999995 78999999999999999887653
No 4
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=93.61 E-value=0.093 Score=37.36 Aligned_cols=65 Identities=20% Similarity=0.266 Sum_probs=46.2
Q ss_pred ccchhhhhhhhhhccCCCeE-----------E--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 93 FYPEIVGFIEEEKDKFPTVR-----------V--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 93 ~~PeVk~FV~~~~~~f~~L~-----------v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
.-..+++|++++.-.|+.+. + +|-...-|..+++|.+|+...++. -..+.+++.+.|.+.|...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~i~~ll~~~~ 158 (160)
T 3lor_A 81 TPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQF-GQVDDFVLGLLLGSLLSETD 158 (160)
T ss_dssp CHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEE-SCCCHHHHHHHHHHHHTCC-
T ss_pred CHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEec-CcCCHHHHHHHHHHHHhccC
Confidence 34579999998766676421 1 122335699999999998777543 45688999999999887654
No 5
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=90.91 E-value=0.13 Score=36.25 Aligned_cols=65 Identities=12% Similarity=0.206 Sum_probs=44.5
Q ss_pred chhhhhhhhhhccCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEe-cCCCCHHHHHHHHHhhcCCCcc
Q 031251 95 PEIVGFIEEEKDKFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIR-IDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~-I~~W~~D~I~efL~~kL~~~~~ 159 (163)
.++++|++++...|+-+ ++ .|....-|.++++|.+|+...+.. ...++.+++.++|.+.+...++
T Consensus 74 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~ 146 (152)
T 3gl3_A 74 GDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEG 146 (152)
T ss_dssp HHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHcCCCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccccc
Confidence 46888888766555421 11 133345699999999999887664 4568899999999998877654
No 6
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=90.34 E-value=0.48 Score=34.55 Aligned_cols=38 Identities=16% Similarity=0.299 Sum_probs=32.0
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.-|+++++|.+|++..++....|+.+.+.++|.+.++.
T Consensus 116 ~~Pt~~~~d~~G~~~~~~G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 116 GFPELVFIDAEGKQLARMGFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp SSSEEEEECTTCCEEEEECCCTTCHHHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCCCEEEEecCCCCCHHHHHHHHHHHHhc
Confidence 47999999999999888744567899999999987764
No 7
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=89.64 E-value=0.28 Score=34.85 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=47.6
Q ss_pred cccchhhhhhhhhhccCCCeEEE----------Ee--cCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 92 VFYPEIVGFIEEEKDKFPTVRVQ----------YV--FNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 92 ~~~PeVk~FV~~~~~~f~~L~vk----------yv--~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
..-+++++|++++.-.||.+... |- .+.-|.++++|.+|+...++ ....+.+++.++|.+-++...
T Consensus 66 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-~g~~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 66 DTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTI-TGEVNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp SCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEEC-CSCCCHHHHHHHHHHHHTC--
T ss_pred CChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEE-CCCCCHHHHHHHHHHHHHHhh
Confidence 55678999999887778765321 22 44679999999999876654 345688999999987766543
No 8
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=89.50 E-value=0.27 Score=34.55 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=38.2
Q ss_pred chhhhhhhhhhccCCCe---------EEEEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHh
Q 031251 95 PEIVGFIEEEKDKFPTV---------RVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQE 152 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L---------~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~ 152 (163)
.++++|+++....|+++ .-.|.....|.++++|.+|+...+.. +.+.|++||.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~----~~~~l~~~l~e 142 (142)
T 3eur_A 80 DEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDA----TLQKVEQYLAE 142 (142)
T ss_dssp HHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEE----CHHHHHHHHHC
T ss_pred HHHHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCC----CHHHHHHHHhC
Confidence 46888888766555442 11334456799999999998877653 58999999864
No 9
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=89.39 E-value=0.23 Score=33.92 Aligned_cols=60 Identities=8% Similarity=0.218 Sum_probs=40.7
Q ss_pred cchhhhhhhhhhccCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEe-c-CCCCHHHHHHHHHhhc
Q 031251 94 YPEIVGFIEEEKDKFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIR-I-DNWKREHMLQFLQEKV 154 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~-I-~~W~~D~I~efL~~kL 154 (163)
-.++++|++++.-.|+.+ ++ +|....-|.++++|.+|+.. ++. . ...+.+++.++|.+.|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 67 VGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp HHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 347888888765555422 11 23334569999999999887 332 1 4578999999998765
No 10
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=89.28 E-value=0.16 Score=35.26 Aligned_cols=58 Identities=21% Similarity=0.218 Sum_probs=41.4
Q ss_pred chhhhhhhhhhccCCCe--------EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 95 PEIVGFIEEEKDKFPTV--------RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L--------~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.++++|++++.-.|+.+ ++ +|-...-|.++++|.+|+...+.. +.+++.++|.+.|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~----~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 80 EAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI----QGEALTGKLKELLKT 147 (148)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC----CHHHHHHHHHHHC--
T ss_pred HHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC----CHHHHHHHHHHHHcc
Confidence 47888888766555432 11 233336699999999998887765 999999999988764
No 11
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=88.92 E-value=1.1 Score=32.14 Aligned_cols=37 Identities=5% Similarity=0.142 Sum_probs=30.4
Q ss_pred CCCeEEEecCCCCeeeEEec-CCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRI-DNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I-~~W~~D~I~efL~~kL~ 155 (163)
+.|...++|.+|+...++.= ..|+.++|.+.|.+.|+
T Consensus 135 ~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 135 HQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp SCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred eeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 46889999999998887653 34889999999988765
No 12
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=88.81 E-value=0.77 Score=31.60 Aligned_cols=63 Identities=13% Similarity=0.070 Sum_probs=45.0
Q ss_pred cchhhhhhhhhhccCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 94 YPEIVGFIEEEKDKFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
..++++|++++.-.|+-+ ++ +|....-|.++++|.+|+...+..- ..+.+++.++|.+.|...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~l~~~ 147 (148)
T 2b5x_A 78 PGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAG-GSGMKMLEKRVNRVLAET 147 (148)
T ss_dssp HHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEES-CSTTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecC-CCCHHHHHHHHHHHHhcc
Confidence 457899998776666532 11 1333466999999999988776543 468899999999888653
No 13
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=88.45 E-value=0.25 Score=33.56 Aligned_cols=60 Identities=10% Similarity=0.240 Sum_probs=40.3
Q ss_pred cchhhhhhhhhhc-cCCCe-------EEEEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 94 YPEIVGFIEEEKD-KFPTV-------RVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 94 ~PeVk~FV~~~~~-~f~~L-------~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
-.++++|++++.- .|+.+ .-+|....-|.++++|.+|+.. + .....+.+++.++|.+.|+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~-~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 68 VPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-V-VRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp HHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-E-EESCCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-E-EecCCCHHHHHHHHHHHhc
Confidence 3468888875543 44321 1123334679999999999887 3 3455789999999988775
No 14
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=88.22 E-value=1 Score=30.90 Aligned_cols=40 Identities=13% Similarity=0.220 Sum_probs=32.1
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~ 159 (163)
.-|+++++|.+|+...++. -..+.+++.++|.+.+.+...
T Consensus 86 ~~Pt~~~~d~~G~~~~~~~-G~~~~~~l~~~l~~~~~~~~~ 125 (130)
T 2kuc_A 86 AYPTLLFINSSGEVVYRLV-GAEDAPELLKKVKLGVESEGH 125 (130)
T ss_dssp SSCEEEEECTTSCEEEEEE-SCCCHHHHHHHHHHHHSCCC-
T ss_pred CCCEEEEECCCCcEEEEec-CCCCHHHHHHHHHHHHHhccc
Confidence 4699999999998877653 345789999999999988764
No 15
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=88.17 E-value=0.92 Score=31.88 Aligned_cols=64 Identities=14% Similarity=0.315 Sum_probs=44.6
Q ss_pred chhhhhhhhhhccCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcc
Q 031251 95 PEIVGFIEEEKDKFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~ 159 (163)
..+++|++++.-.|+-+ ++ +|....-|.++++|.+|+...++. -.++.+++.++|...+.....
T Consensus 72 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-G~~~~~~l~~~l~~ll~~~~~ 142 (151)
T 2f9s_A 72 IAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVT-GTMTESMIHDYMNLIKPGETS 142 (151)
T ss_dssp HHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEE-SCCCHHHHHHHHHHHSCC---
T ss_pred HHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEe-CCCCHHHHHHHHHHHHhhhhc
Confidence 47889998776666532 11 133335699999999998776654 556999999999988876553
No 16
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=88.13 E-value=0.47 Score=32.99 Aligned_cols=57 Identities=12% Similarity=0.138 Sum_probs=39.3
Q ss_pred chhhhhhhhhhccCCCeE-------E--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 95 PEIVGFIEEEKDKFPTVR-------V--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L~-------v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
..+++|++++.-.|+.+- . .|....-|.++++|.+|+... ...+.++|.++|.+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~----~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 76 EEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVIL----KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp HHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEE----CSCCHHHHHHHHHC---
T ss_pred HHHHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEe----cCCCHHHHHHHHHHHcc
Confidence 367888887665554321 1 344446799999999998765 46789999999987643
No 17
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=87.81 E-value=2.2 Score=30.04 Aligned_cols=65 Identities=15% Similarity=0.221 Sum_probs=46.6
Q ss_pred ccchhhhhhhhhhccCCCeEE------------EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 93 FYPEIVGFIEEEKDKFPTVRV------------QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 93 ~~PeVk~FV~~~~~~f~~L~v------------kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
.-.++++|++++.-.|+.+-- .|-...-|..+++|.+|+...++. -..+.+++.+.|.+.|....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~i~~ll~~~~ 155 (158)
T 3eyt_A 79 TPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHF-GDVSELLLGAEIATLLGEAA 155 (158)
T ss_dssp CHHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEE-SCCCHHHHHHHHHHHHTSCC
T ss_pred CHHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEe-CCCCHHHHHHHHHHHhccCC
Confidence 345799999987766764211 122235699999999997776554 45789999999999887654
No 18
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=87.79 E-value=2.1 Score=31.57 Aligned_cols=64 Identities=20% Similarity=0.101 Sum_probs=48.7
Q ss_pred hhhhhhhhhhccCCCeEE--------------------E---EecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHh
Q 031251 96 EIVGFIEEEKDKFPTVRV--------------------Q---YVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQE 152 (163)
Q Consensus 96 eVk~FV~~~~~~f~~L~v--------------------k---yv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~ 152 (163)
.+++|+++....|++..+ . |...+.|.+.|+|.+|+....+.=..++.++|.+.|.+
T Consensus 80 ~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~ 159 (170)
T 3me7_A 80 DIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRL 159 (170)
T ss_dssp HHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 588888877666655211 1 22346789999999999988877778999999999999
Q ss_pred hcCCCcc
Q 031251 153 KVKPTSA 159 (163)
Q Consensus 153 kL~~~~~ 159 (163)
.+.....
T Consensus 160 ~~~~~~~ 166 (170)
T 3me7_A 160 ARGEGHH 166 (170)
T ss_dssp HTTCSCT
T ss_pred hhccccc
Confidence 8887654
No 19
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=87.50 E-value=0.76 Score=33.69 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=43.5
Q ss_pred chhhhhhhhhhc-cCCCeE-----------EEEecCCCCeEEEecCCCCeeeEEe-cCCCCHHHHHHHHHhhcCCCcc
Q 031251 95 PEIVGFIEEEKD-KFPTVR-----------VQYVFNSPPKLIMLDEEGQHKETIR-IDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 95 PeVk~FV~~~~~-~f~~L~-----------vkyv~Ga~P~L~LlD~~g~~~E~i~-I~~W~~D~I~efL~~kL~~~~~ 159 (163)
.++++|++++.- .|+-+. +.+....-|.++++|.+|++..++. ...|+.+++.++|...|....+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~a~ 184 (186)
T 1jfu_A 107 EKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKAAA 184 (186)
T ss_dssp THHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC----
T ss_pred HHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccccc
Confidence 468899986543 344321 0000125799999999999987764 4678999999999998876543
No 20
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=86.77 E-value=0.54 Score=33.16 Aligned_cols=64 Identities=14% Similarity=0.174 Sum_probs=44.5
Q ss_pred cchhhhhhhhhhccCCCeEE----------EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 94 YPEIVGFIEEEKDKFPTVRV----------QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L~v----------kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
..++++|++++...|+.+.- +|-...-|.++++|.+|+...+.. ...+.+++.++|.+.++...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 74 REVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFA-GRAGREALLDALLLAGADLE 147 (154)
T ss_dssp HHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEE-SBCCHHHHHHHHHHTTCCC-
T ss_pred HHHHHHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEc-CCCCHHHHHHHHHhccCccc
Confidence 44688888765544433211 233336699999999998777653 55789999999999887654
No 21
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=86.69 E-value=1.6 Score=29.83 Aligned_cols=40 Identities=15% Similarity=0.195 Sum_probs=32.5
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~ 159 (163)
.-|+++++|.+|++..++. -..+.+++.++|.+.+.+...
T Consensus 82 ~~Pt~~~~~~~G~~~~~~~-G~~~~~~l~~~l~~~~~~~~~ 121 (126)
T 2l57_A 82 IVPTTVFLDKEGNKFYVHQ-GLMRKNNIETILNSLGVKEGH 121 (126)
T ss_dssp SSSEEEEECTTCCEEEEEE-SCCCHHHHHHHHHHHCCCCCC
T ss_pred ceeEEEEECCCCCEEEEec-CCCCHHHHHHHHHHHhccccc
Confidence 5699999999998877543 457899999999999887653
No 22
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=85.46 E-value=0.6 Score=34.45 Aligned_cols=64 Identities=17% Similarity=0.191 Sum_probs=44.8
Q ss_pred chhhhhhhhhhccCCCeE-----E--EEecCCCCeEEEecCCCCeeeEEecC--------CCCHHHHHHHHHhhcCCCc
Q 031251 95 PEIVGFIEEEKDKFPTVR-----V--QYVFNSPPKLIMLDEEGQHKETIRID--------NWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L~-----v--kyv~Ga~P~L~LlD~~g~~~E~i~I~--------~W~~D~I~efL~~kL~~~~ 158 (163)
.++++|++++.-.|+-+. + +|....-|.++++|.+|+...+..++ .++.++|.+.|.+.+....
T Consensus 99 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 99 ENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp HHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 468899987766665321 1 12222459999999999988876543 4588999999988876544
No 23
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=84.90 E-value=1.7 Score=30.26 Aligned_cols=37 Identities=11% Similarity=0.355 Sum_probs=29.5
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
..-|+++++|.+|+.. ...-..+.++|.++|.+.|+.
T Consensus 104 ~~~Pt~~~~~~~g~~~--~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 104 QSIPTIWFVPMKGEPQ--VNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp CSSSEEEEECSSSCCE--EEESCCCHHHHHHHHHHTTC-
T ss_pred CCcCEEEEEeCCCCEE--EEeCCCCHHHHHHHHHHHHcc
Confidence 3569999999999775 345667999999999998864
No 24
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=84.28 E-value=0.5 Score=34.83 Aligned_cols=65 Identities=15% Similarity=0.281 Sum_probs=44.3
Q ss_pred cchhhhhhhhhhccCCCeE-----EEEecC--CCCeEEEecCCCCeeeEEecCCC-------CHHHHHHHHHhhcCCCc
Q 031251 94 YPEIVGFIEEEKDKFPTVR-----VQYVFN--SPPKLIMLDEEGQHKETIRIDNW-------KREHMLQFLQEKVKPTS 158 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L~-----vkyv~G--a~P~L~LlD~~g~~~E~i~I~~W-------~~D~I~efL~~kL~~~~ 158 (163)
...+++|++++.-.|+.+. +...+| ..|..+++|.+|+...+-.++.+ +.++|.+.|.+.+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 84 PEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp HHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 3578999997766665321 111223 34999999999998887444332 67899999988876544
No 25
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=83.67 E-value=1.5 Score=30.73 Aligned_cols=39 Identities=13% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
..-|+++++|.+|+.. + ..-..+.+.|.++|.+.+....
T Consensus 91 ~~~Pt~~~~~~~G~~~-~-~~G~~~~~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 91 RSIPSILFIPMEGKPE-M-AQGAMPKASFKKAIDEFLLKKE 129 (136)
T ss_dssp CSSCEEEEECSSSCCE-E-EESCCCHHHHHHHHHHHHTSCT
T ss_pred CCCCEEEEECCCCcEE-E-EeCCCCHHHHHHHHHHHhhccC
Confidence 3569999999999876 3 3567899999999999887653
No 26
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=83.44 E-value=0.57 Score=33.14 Aligned_cols=57 Identities=19% Similarity=0.264 Sum_probs=41.4
Q ss_pred chhhhhhhhhhccCCCeE--------E--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 95 PEIVGFIEEEKDKFPTVR--------V--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L~--------v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.++++|++++.-.|+.+. + .|-...-|..+++|.+|+...+.. +.+++.+.|.+.|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~----~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 82 QQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL----RGEELKKKIENIVE 148 (150)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC----CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC----CHHHHHHHHHHHHh
Confidence 478999987766665431 1 233336699999999998887763 88899988887654
No 27
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=83.03 E-value=1.7 Score=30.06 Aligned_cols=36 Identities=11% Similarity=0.354 Sum_probs=28.8
Q ss_pred CCCCeEEEecCCCCeeeEEecC------CCCHHHHHHHHHhh
Q 031251 118 NSPPKLIMLDEEGQHKETIRID------NWKREHMLQFLQEK 153 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~------~W~~D~I~efL~~k 153 (163)
..-|+++++|.+|+...+..-. .++.+++.+||.+-
T Consensus 90 ~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 90 DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 4569999999999887765442 48999999999864
No 28
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=82.76 E-value=1.2 Score=31.42 Aligned_cols=60 Identities=20% Similarity=0.314 Sum_probs=41.3
Q ss_pred cchhhhhhhhhhccCCCeEE----------EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 94 YPEIVGFIEEEKDKFPTVRV----------QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L~v----------kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
-.++++|++++...|+.+.- +|-...-|.++++|.+|+...+. .+.+++.++|.+.+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~----~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 74 EEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE----LRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp HHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC----CCTTHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEee----CCHHHHHHHHHHHHhhc
Confidence 34788888876656654321 12233569999999999887775 36688988888766644
No 29
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=83.17 E-value=0.26 Score=34.21 Aligned_cols=59 Identities=12% Similarity=0.228 Sum_probs=39.6
Q ss_pred chhhhhhhhhhccCCCe--------EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 95 PEIVGFIEEEKDKFPTV--------RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L--------~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.++++|++++...|+.+ ++ +|-...-|.++++|.+|++..+.....|......+ +++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~~~-~~~~~ 142 (143)
T 2lus_A 74 DDMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQSLGPRA-FQNWA 142 (143)
Confidence 36888888665455432 22 34344579999999999998887777776555555 65554
No 30
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=82.40 E-value=1.8 Score=31.58 Aligned_cols=61 Identities=13% Similarity=0.175 Sum_probs=43.9
Q ss_pred cchhhhhhhhhhccCCCeEE-----E-----EecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 94 YPEIVGFIEEEKDKFPTVRV-----Q-----YVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L~v-----k-----yv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
-..+++|++++.-.|+.+-- . |....-|..+++|.+|+...++. ..++.++|.++|.+.|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 111 RDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFL-REVTSKDVLDVALPLVD 181 (183)
T ss_dssp HHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEEC-SCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEc-CCCCHHHHHHHHHHHHh
Confidence 34688999877666665311 0 12245699999999998877654 55799999999988765
No 31
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=81.91 E-value=2 Score=29.97 Aligned_cols=60 Identities=13% Similarity=0.214 Sum_probs=41.9
Q ss_pred chhhhhhhhhhccCCCeEEE--------EecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 95 PEIVGFIEEEKDKFPTVRVQ--------YVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L~vk--------yv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
..+++|++++.-.|+.+-.. |-...-|..+++|.+|+...++. -..+.+.+.++|.+.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~~~-g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 85 DNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLV-GPITPDNLRSVLLPQME 152 (156)
T ss_dssp HHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSBEEEEEE-SCCCHHHHHHTHHHHHH
T ss_pred HHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCeEEEEcCCCCEEEEEe-CCCCHHHHHHHHHHHHH
Confidence 46888988777677743222 33335699999999998776553 34578888888887664
No 32
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=81.74 E-value=1.3 Score=32.45 Aligned_cols=44 Identities=5% Similarity=0.112 Sum_probs=33.6
Q ss_pred CeEEEEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 110 TVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 110 ~L~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
++..+|..-..|+|+|++ +|+++.++ +--.+.+.+.++|.+.+.
T Consensus 67 ~la~~~~V~g~PT~i~f~-~G~ev~Ri-~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 67 GLELARPVTFTPTFVLMA-GDVESGRL-EGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp TCBCSSCCCSSSEEEEEE-TTEEEEEE-ECCCCHHHHHHHHHHHHH
T ss_pred hHHHHCCCCCCCEEEEEE-CCEEEeee-cCCCCHHHHHHHHHHHHh
Confidence 344455555789999999 99998876 467788998888877654
No 33
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=81.52 E-value=1.5 Score=30.66 Aligned_cols=64 Identities=16% Similarity=0.330 Sum_probs=43.2
Q ss_pred cchhhhhhhhhhccCCCeE-----E--EEecCCCCeEEEecCCCCeeeEEec-CCCCHHHHHHHHHhhcCCC
Q 031251 94 YPEIVGFIEEEKDKFPTVR-----V--QYVFNSPPKLIMLDEEGQHKETIRI-DNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L~-----v--kyv~Ga~P~L~LlD~~g~~~E~i~I-~~W~~D~I~efL~~kL~~~ 157 (163)
-.++++|++++.-.|+-+. + .|-...-|..+++|.+|+...++.= ..|+.+++.++|.+-....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 74 KVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp HHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC----
T ss_pred hHHHHHHHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHh
Confidence 3468888887765665431 1 1333356999999999999887654 4599999999998765543
No 34
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=80.53 E-value=0.43 Score=33.51 Aligned_cols=64 Identities=14% Similarity=0.212 Sum_probs=43.9
Q ss_pred chhhhhhhhhhccCCCe------EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcc
Q 031251 95 PEIVGFIEEEKDKFPTV------RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L------~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~ 159 (163)
.++++|+++....|+.+ ++ +|....-|.++++|.+|+...+. .-.++.+++.++|.+.+...+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-~g~~~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 76 KAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISAN-MTRPSDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp HHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESS-CCCTTCHHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEcc-CCCCCHHHHHHHHHHHhccccc
Confidence 46888888654433211 11 23333569999999999887764 3468999999999988876543
No 35
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=79.31 E-value=1.7 Score=32.84 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=29.9
Q ss_pred EecCCCCeEEEecCC-CCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 115 YVFNSPPKLIMLDEE-GQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 115 yv~Ga~P~L~LlD~~-g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
|-....|.++++|.+ |++..++ .+.+.+++.++|.+-++
T Consensus 97 y~v~~~P~~~fld~~~G~~l~~~--~g~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 97 YKLGDFPYVSILDPRTGQKLVEW--HQLDVSSFLDQVTGFLG 136 (153)
T ss_dssp HTCCSSSEEEEECTTTCCCCEEE--SSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEeCCCCcEeeec--CCCCHHHHHHHHHHHHH
Confidence 334568999999998 8777775 46999998888876553
No 36
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=78.95 E-value=1.5 Score=30.18 Aligned_cols=44 Identities=20% Similarity=0.407 Sum_probs=31.2
Q ss_pred EecCCCCeEEEecCCCCeeeEEecC-C-CCHHHHHHHHHhhcCCCcc
Q 031251 115 YVFNSPPKLIMLDEEGQHKETIRID-N-WKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 115 yv~Ga~P~L~LlD~~g~~~E~i~I~-~-W~~D~I~efL~~kL~~~~~ 159 (163)
|-...-|++++++..++ ...+... + .+.++|.+||.+.+.....
T Consensus 77 ~~v~~~Pt~~~~~~g~~-~~~~~~~gg~~~~~~l~~~l~~~~~~~~~ 122 (133)
T 2dj3_A 77 YKVEGFPTIYFAPSGDK-KNPIKFEGGNRDLEHLSKFIDEHATKRSR 122 (133)
T ss_dssp CCCSSSSEEEEECTTCT-TSCEECCSSCCSTTHHHHHHHHHSSSCSS
T ss_pred cCCCcCCEEEEEeCCCc-ccceEecCCCcCHHHHHHHHHHhcccccC
Confidence 33345699999987664 4444444 4 8999999999999886543
No 37
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=78.79 E-value=0.52 Score=33.83 Aligned_cols=59 Identities=10% Similarity=0.074 Sum_probs=39.5
Q ss_pred cchhhhhhhhhhc-cCCCe------EEEEecCCCCeEEEecCCCCeeeEEecCCC-CHHHHHHHHHhhcC
Q 031251 94 YPEIVGFIEEEKD-KFPTV------RVQYVFNSPPKLIMLDEEGQHKETIRIDNW-KREHMLQFLQEKVK 155 (163)
Q Consensus 94 ~PeVk~FV~~~~~-~f~~L------~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W-~~D~I~efL~~kL~ 155 (163)
..++++|++++.- .|+.+ .-+|-...-|.++++|.+|+... .... +.+++.++|.+.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~---~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 98 PEMFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY---AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp HHHHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE---EEESCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE---eCCCCCHHHHHHHHHHHhc
Confidence 3468888886544 55432 11233335699999999998877 4445 79999999987654
No 38
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=78.78 E-value=3.2 Score=29.20 Aligned_cols=64 Identities=11% Similarity=0.295 Sum_probs=43.1
Q ss_pred chhhhhhhhhhccCCCeEEE------E------ecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcc
Q 031251 95 PEIVGFIEEEKDKFPTVRVQ------Y------VFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L~vk------y------v~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~ 159 (163)
..+++|++++...|+.+.-. | -...-|.++++|.+|++..++. ...+.+++.++|.+.|+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~l~~~l~~~~~ 155 (165)
T 3or5_A 80 PNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIV-GPRSKADFDRIVKMALGAKAA 155 (165)
T ss_dssp HHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEEC-SCCCHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHcCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEc-CCCCHHHHHHHHHHHHhhhcc
Confidence 46888988776666643211 1 1335699999999998875543 445899999999998876543
No 39
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=78.53 E-value=4 Score=29.29 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
.-|++++++ +|+...++ .+.+.++|.++|.+.+....
T Consensus 85 ~~Pt~~~~~-~G~~~~~~--~G~~~~~l~~~i~~~l~~~~ 121 (153)
T 2wz9_A 85 SVPTFLFFK-NSQKIDRL--DGAHAPELTKKVQRHASSGS 121 (153)
T ss_dssp SSSEEEEEE-TTEEEEEE--ESSCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEE-CCEEEEEE--eCCCHHHHHHHHHHHhcccc
Confidence 569999999 99776654 45688999999999987654
No 40
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=78.23 E-value=1.1 Score=31.70 Aligned_cols=34 Identities=6% Similarity=0.204 Sum_probs=28.1
Q ss_pred CeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 121 PKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
|...++|.+|+...++ ....+.++|.+.|.+.|+
T Consensus 128 ~~~~lid~~G~i~~~~-~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 128 IIMYLIGPDGEFLDYF-GQNKRKGEIAASIATHMR 161 (164)
T ss_dssp CEEEEECTTSCEEEEE-ETTCCHHHHHHHHHHHHG
T ss_pred ceEEEECCCCeEEEEe-CCCCCHHHHHHHHHHHHH
Confidence 4899999999988876 456788999999887765
No 41
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=76.57 E-value=4.2 Score=27.25 Aligned_cols=39 Identities=21% Similarity=0.309 Sum_probs=30.7
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~ 159 (163)
.-|+++++ .+|+...++. -..+.+++.+||.+.+.+..-
T Consensus 71 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~~~~~~~ 109 (112)
T 2voc_A 71 SIPTLLVL-KDGEVVETSV-GFKPKEALQELVNKHLLEHHH 109 (112)
T ss_dssp SBSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHTTSCSCCC
T ss_pred cccEEEEE-eCCEEEEEEe-CCCCHHHHHHHHHHHHHhhcc
Confidence 45888888 8997766543 457889999999999987653
No 42
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=76.50 E-value=1.4 Score=31.55 Aligned_cols=61 Identities=7% Similarity=0.126 Sum_probs=41.9
Q ss_pred chhhhhhhhhhccCCCeEE--------EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 95 PEIVGFIEEEKDKFPTVRV--------QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L~v--------kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.++++|++++...|+.+-. +|-...-|..+++|.+|+...++. ...+.+.+.++|.+.|..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~l~~~l~~ 161 (168)
T 2b1k_A 93 QKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA-GDLNPRVWEEEIKPLWEK 161 (168)
T ss_dssp HHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEE-SCCCHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHcCCCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEe-CCCCHHHHHHHHHHHHHH
Confidence 4688888876666653211 132334698899999998776543 457889999988877654
No 43
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=76.04 E-value=3.7 Score=27.12 Aligned_cols=40 Identities=13% Similarity=0.148 Sum_probs=26.0
Q ss_pred EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 114 QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 114 kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
+|-...-|++++++ +|+...++. -..+.+++.++|.+.++
T Consensus 66 ~~~v~~~Pt~~~~~-~G~~~~~~~-g~~~~~~l~~~l~~~~e 105 (105)
T 4euy_A 66 RYAVFTGPTVLLFY-NGKEILRES-RFISLENLERTIQLFEE 105 (105)
T ss_dssp ----CCCCEEEEEE-TTEEEEEEE-SSCCHHHHHHHHHTTC-
T ss_pred hcCCCCCCEEEEEe-CCeEEEEEe-CCcCHHHHHHHHHHhhC
Confidence 44445668888885 887765543 33489999999988763
No 44
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=75.99 E-value=4.3 Score=28.22 Aligned_cols=66 Identities=11% Similarity=0.173 Sum_probs=45.4
Q ss_pred cchhhhhhhhhhccCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCccc
Q 031251 94 YPEIVGFIEEEKDKFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSAS 160 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~~ 160 (163)
...+++|++++...|+.+ ++ .|....-|.++++|.+|+...++. -..+.+.+.++|.+.|+.....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~l~~ll~~~~~~ 146 (153)
T 2l5o_A 74 IESVRQYVKDYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYV-GEPDFGKLYQEIDTAWRNSDAE 146 (153)
T ss_dssp HHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEE-SSCCHHHHHHHHHHHHHCCSSC
T ss_pred HHHHHHHHHHcCCCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEc-CCCCHHHHHHHHHHHHHhhhhc
Confidence 346888888665555321 11 132335699999999998876654 3578999999999888766554
No 45
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=75.67 E-value=4.9 Score=28.24 Aligned_cols=40 Identities=8% Similarity=0.271 Sum_probs=31.5
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
..-|.++++|.+|+...++. -..+.+++.++|.+.+....
T Consensus 120 ~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~i~~~~~~~~ 159 (164)
T 2h30_A 120 SVYPSWALIGKDGDVQRIVK-GSINEAQALALIRNPNADLG 159 (164)
T ss_dssp CSSSEEEEECTTSCEEEEEE-SCCCHHHHHHHHHCTTCCCG
T ss_pred CccceEEEECCCCcEEEEEc-CCCCHHHHHHHHHHHHHHHH
Confidence 35699999999998877653 34689999999998876543
No 46
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=75.30 E-value=3.8 Score=27.15 Aligned_cols=37 Identities=8% Similarity=0.328 Sum_probs=26.5
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
.-|+++++ .+|+...++ .+.+.+++.++|.+.+...+
T Consensus 81 ~~Pt~~~~-~~g~~~~~~--~g~~~~~l~~~l~~~~~~~~ 117 (118)
T 2vm1_A 81 AMPTFLFI-KDGEKVDSV--VGGRKDDIHTKIVALMGSAS 117 (118)
T ss_dssp SBSEEEEE-ETTEEEEEE--ESCCHHHHHHHHHHHHC---
T ss_pred cCcEEEEE-eCCeEEEEe--cCCCHHHHHHHHHHHhcccC
Confidence 45788777 688776654 45789999999999887643
No 47
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=75.09 E-value=0.55 Score=32.63 Aligned_cols=32 Identities=13% Similarity=0.484 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhh
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEK 153 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~k 153 (163)
+-|+++++ .+|++.+++. +-+.+.|.+|+.++
T Consensus 73 ~~PT~~~~-~~G~~v~~~~--G~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 73 CMPTFLFM-KNGQKLDSLS--GANYDKLLELVEKN 104 (105)
T ss_dssp BSSEEEEE-ETTEEEEEEE--SCCHHHHHHHHHHH
T ss_pred eecEEEEE-ECCEEEEEEe--CcCHHHHHHHHHhc
Confidence 45777776 6898887764 67899999999753
No 48
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=75.02 E-value=2 Score=31.17 Aligned_cols=38 Identities=21% Similarity=0.356 Sum_probs=29.8
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
..-|+++++|.+|++..++.=...+.+++.++|.+.|+
T Consensus 129 ~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 129 NAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp CCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred CCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 35699999999998887766333338999999988765
No 49
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=74.51 E-value=2 Score=29.07 Aligned_cols=44 Identities=14% Similarity=0.231 Sum_probs=28.8
Q ss_pred CCCeEEEecCCCCeeeEEe--cCCCCHHHHHHHHHhhcCCCccccC
Q 031251 119 SPPKLIMLDEEGQHKETIR--IDNWKREHMLQFLQEKVKPTSASAK 162 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~--I~~W~~D~I~efL~~kL~~~~~~~~ 162 (163)
.-|++++++.+|+...... +...+.+++.++|.+.|+...+.+|
T Consensus 75 ~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~k 120 (122)
T 3aps_A 75 AYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLETLQSQVK 120 (122)
T ss_dssp SSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHCC-----
T ss_pred ccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHHhhhhhhc
Confidence 5699999988776322222 2447999999999999887665543
No 50
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=74.28 E-value=2.9 Score=28.47 Aligned_cols=58 Identities=24% Similarity=0.422 Sum_probs=39.3
Q ss_pred ccchhhhhhhhhhccCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHH
Q 031251 93 FYPEIVGFIEEEKDKFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQ 151 (163)
Q Consensus 93 ~~PeVk~FV~~~~~~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~ 151 (163)
....+++|++++.-.|+-+ ++ +|-...-|.++++|.+|+...++ .-..+.+++.++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 81 NQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTK-IGPMTAEQLKEWTE 145 (145)
T ss_dssp CHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEE-ESCCCHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEE-cCCcCHHHHHHhhC
Confidence 3457888988766556532 11 12223459999999999877654 35578899988873
No 51
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=74.22 E-value=6.4 Score=26.04 Aligned_cols=58 Identities=21% Similarity=0.353 Sum_probs=38.8
Q ss_pred cchhhhhhhhhhc-cCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHh
Q 031251 94 YPEIVGFIEEEKD-KFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQE 152 (163)
Q Consensus 94 ~PeVk~FV~~~~~-~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~ 152 (163)
..++++|++++.- .|+-+ ++ +|....-|.++++|.+|+...+.. ...+.+++.++|.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 71 EADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHP-GFMEKDAILQTLKE 136 (138)
T ss_dssp HHHHHHHHTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEE-SCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEeec-CCCcHHHHHHHHHh
Confidence 3467788875433 44322 11 233345699999999998877655 55688999998865
No 52
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=73.25 E-value=5.5 Score=25.63 Aligned_cols=33 Identities=6% Similarity=0.304 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|++++++ +|+...++. +.+.+++.++|.+.|
T Consensus 72 ~~Pt~~~~~-~g~~~~~~~--G~~~~~l~~~l~~~l 104 (104)
T 2vim_A 72 AMPTFVFIK-DGKEVDRFS--GANETKLRETITRHK 104 (104)
T ss_dssp SSSEEEEEE-TTEEEEEEE--SSCHHHHHHHHHHHC
T ss_pred cccEEEEEe-CCcEEEEEe--CCCHHHHHHHHHhhC
Confidence 568887775 887665543 578999999998754
No 53
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=73.16 E-value=2.7 Score=30.48 Aligned_cols=61 Identities=18% Similarity=0.206 Sum_probs=34.1
Q ss_pred chhhhhh-hhhhccCCCeE--------E----------EEecCCCC------eEEEecCCCCeeeEEecCCCCHHHHHHH
Q 031251 95 PEIVGFI-EEEKDKFPTVR--------V----------QYVFNSPP------KLIMLDEEGQHKETIRIDNWKREHMLQF 149 (163)
Q Consensus 95 PeVk~FV-~~~~~~f~~L~--------v----------kyv~Ga~P------~L~LlD~~g~~~E~i~I~~W~~D~I~ef 149 (163)
.++++|+ ++....||-+. + .|-....| ...++|.+|+...++. -..+.+++.+.
T Consensus 84 ~~~~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~-g~~~~~~l~~~ 162 (171)
T 3cmi_A 84 EEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYS-SLTKPSSLSET 162 (171)
T ss_dssp -----------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEEC-TTSCGGGGHHH
T ss_pred HHHHHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeC-CCCCHHHHHHH
Confidence 4688888 66655666542 1 12222346 8899999998887754 34677889998
Q ss_pred HHhhcCC
Q 031251 150 LQEKVKP 156 (163)
Q Consensus 150 L~~kL~~ 156 (163)
|.+.|+.
T Consensus 163 i~~ll~~ 169 (171)
T 3cmi_A 163 IEELLKE 169 (171)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 8887754
No 54
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=73.00 E-value=1.3 Score=29.28 Aligned_cols=39 Identities=10% Similarity=0.368 Sum_probs=28.1
Q ss_pred CCCCeEEEecCCCCeeeEEec-CCCCHHHHHHHHHhhcCCC
Q 031251 118 NSPPKLIMLDEEGQHKETIRI-DNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I-~~W~~D~I~efL~~kL~~~ 157 (163)
..-|+++++ .+|+....... ...+.+.+.+||.+.+.+.
T Consensus 80 ~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 80 RGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp CSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred CcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 456888888 57766522333 4578999999999988764
No 55
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=72.51 E-value=5.9 Score=25.20 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=26.6
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.-|+++++ .+|+...++. ...+.+++.++|.+.|+
T Consensus 69 ~~Pt~~~~-~~g~~~~~~~-g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 69 SLPTVIFF-KDGEPVDEII-GAVPREEIEIRIKNLLG 103 (104)
T ss_dssp SSCEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHHT
T ss_pred ccCEEEEE-ECCeEhhhcc-CCCCHHHHHHHHHHHhc
Confidence 46888888 7887766543 45688999999998775
No 56
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=71.73 E-value=5.3 Score=27.67 Aligned_cols=40 Identities=13% Similarity=0.310 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcccc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSASA 161 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~~~ 161 (163)
.-|+++++ .+|+...++. +.+.+++.++|.+.+.....++
T Consensus 99 ~~Pt~~~~-~~G~~~~~~~--G~~~~~l~~~l~~~~~~~~~~~ 138 (139)
T 3d22_A 99 ATPTFFFL-RDGQQVDKLV--GANKPELHKKITAILDSLPPSD 138 (139)
T ss_dssp EESEEEEE-ETTEEEEEEE--SCCHHHHHHHHHHHHHTSCTTT
T ss_pred cccEEEEE-cCCeEEEEEe--CCCHHHHHHHHHHHhccCCCCC
Confidence 34888877 8897776543 4589999999998887655544
No 57
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=71.68 E-value=3.3 Score=29.48 Aligned_cols=37 Identities=8% Similarity=0.202 Sum_probs=29.2
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
+.|...++|.+|++..++. ...+.++|.+.|...|+.
T Consensus 129 ~~~~~~lid~~G~i~~~~~-g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 129 HSIAIYLLNPDGLFTDYYG-RSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp CCCEEEEECTTSCEEEEEE-SSCCHHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCeEEEEEC-CCCCHHHHHHHHHHHHHH
Confidence 3458999999999888764 457889999988877653
No 58
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=71.57 E-value=4.6 Score=27.04 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=27.2
Q ss_pred CCCeEEEecCCCCe-eeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 119 SPPKLIMLDEEGQH-KETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 119 a~P~L~LlD~~g~~-~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
.-|++++++..|+. ..++ .-..+.++|.+||.+.+...
T Consensus 81 ~~Pt~~~~~~~~~~~~~~~-~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 81 GFPTIKLYPAGAKGQPVTY-SGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSSEEEEECSSCTTSCCCC-CCCSCHHHHHHHHHHTSSSC
T ss_pred cCCeEEEEeCcCCCCceEe-cCCCCHHHHHHHHHhccCcC
Confidence 45899999888763 2222 23468999999999987643
No 59
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=70.64 E-value=3.6 Score=28.01 Aligned_cols=40 Identities=8% Similarity=0.141 Sum_probs=29.2
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
..-|++++++.+|+...++ ....+.+++.++|.+.++...
T Consensus 88 ~~~Pt~~~~~~~~~~~~~~-~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 88 QGFPTIKIFGANKNKPEDY-QGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp CSSSEEEEESSCTTSCEEC-CSCCSHHHHHHHHHHHHHHSS
T ss_pred CccCEEEEEeCCCCeEEEe-ecCCCHHHHHHHHHHHHhcCC
Confidence 3569999999988634332 245678999999999886544
No 60
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=70.39 E-value=6.4 Score=25.34 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=26.4
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
..-|+++++ .+|+...++. ...+.+++.++|.+.++.
T Consensus 71 ~~~Pt~~~~-~~g~~~~~~~-g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 71 MSIPTVILF-KDGQPVEVLV-GAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp CSSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHTTC--
T ss_pred CcCCEEEEE-eCCcEeeeEe-CCCCHHHHHHHHHHHhhh
Confidence 356888888 7887665433 455789999999988764
No 61
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=70.34 E-value=6.2 Score=25.49 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++. +.+.+++.++|.+.|
T Consensus 73 ~~Pt~~~~-~~g~~~~~~~--g~~~~~l~~~l~~~l 105 (105)
T 3m9j_A 73 SMPTFQFF-KKGQKVGEFS--GANKEKLEATINELV 105 (105)
T ss_dssp BSSEEEEE-ETTEEEEEEE--SSCHHHHHHHHHHHC
T ss_pred cCcEEEEE-ECCeEEEEEe--CCCHHHHHHHHHHhC
Confidence 45888888 6787766544 559999999998764
No 62
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=70.31 E-value=4.1 Score=31.22 Aligned_cols=64 Identities=14% Similarity=0.178 Sum_probs=44.1
Q ss_pred chhhhhhhhhhccCCCe-----EEE--EecCCCCeEEEecCCCCeeeEEecCC--------CCHHHHHHHHHhhcCCCc
Q 031251 95 PEIVGFIEEEKDKFPTV-----RVQ--YVFNSPPKLIMLDEEGQHKETIRIDN--------WKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L-----~vk--yv~Ga~P~L~LlD~~g~~~E~i~I~~--------W~~D~I~efL~~kL~~~~ 158 (163)
.++++|+++..-.|+-+ ++. |-....|.++++|.+|+..-+-.++. .+.++|.+.|.+-|....
T Consensus 112 ~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 112 ERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp HHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 46899999776667643 111 22223499999999999886655543 357889998888776544
No 63
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=69.90 E-value=6.8 Score=26.19 Aligned_cols=33 Identities=12% Similarity=0.280 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|++++++ +|+...++. +-+.+.|.++|.+.+
T Consensus 77 ~~Pt~~~~~-~G~~~~~~~--G~~~~~l~~~i~~~l 109 (109)
T 3f3q_A 77 AMPTLLLFK-NGKEVAKVV--GANPAAIKQAIAANA 109 (109)
T ss_dssp SSSEEEEEE-TTEEEEEEE--SSCHHHHHHHHHHHC
T ss_pred ccCEEEEEE-CCEEEEEEe--CCCHHHHHHHHHhhC
Confidence 558888887 887766544 558899999998754
No 64
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=69.58 E-value=7.1 Score=28.61 Aligned_cols=60 Identities=10% Similarity=0.184 Sum_probs=41.8
Q ss_pred chhhhhhhhhhccCCCeEE--------EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 95 PEIVGFIEEEKDKFPTVRV--------QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L~v--------kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.++++|++++.-.|+.+-. .|-...-|..+++|.+|++..+. ...++.+.+.+.|.+.|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 100 AAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKI-VGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEE-ESCCCHHHHHHHTHHHHH
T ss_pred HHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEE-cCCCCHHHHHHHHHHHHH
Confidence 4688899887666664211 13333569999999999777654 455788888888876654
No 65
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=69.52 E-value=3.9 Score=28.79 Aligned_cols=38 Identities=5% Similarity=0.076 Sum_probs=26.1
Q ss_pred CCCeEEEe-cCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIML-DEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~Ll-D~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.-|+++++ |.+|+-.+...+.+.+.++|.++|.+.+..
T Consensus 92 ~~Pt~~~~~~~~g~g~~~~~~~G~~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 92 ALPTFEFYFNLNNEWVLVHTVEGANQNDIEKAFQKYCLE 130 (133)
T ss_dssp SSSEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHHSEE
T ss_pred CCCEEEEEEecCCCeEEEEEEcCCCHHHHHHHHHHHHHh
Confidence 45777777 556653333445566899999999988754
No 66
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=69.13 E-value=13 Score=25.51 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
.-|+++++ .+|+ ..+ ..-..+.+.|.+||.+.+.+..
T Consensus 91 ~~Pt~~~~-~~G~-~~~-~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 91 GYPTIKIL-KKGQ-AVD-YDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp SSSEEEEE-ETTE-EEE-CCSCCCHHHHHHHHHHHHSSSC
T ss_pred ccCeEEEE-ECCc-EEE-cCCCCCHHHHHHHHHHhcCCCC
Confidence 45888888 6786 322 2345789999999999987654
No 67
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=68.45 E-value=7.4 Score=25.31 Aligned_cols=35 Identities=17% Similarity=0.404 Sum_probs=26.2
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.-|+++++ .+|+...++. -..+.+++.++|.+.|+
T Consensus 74 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 74 GIPTLLLF-KNGEVAATKV-GALSKGQLKEFLDANLA 108 (108)
T ss_dssp SSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHHC
T ss_pred ccCEEEEE-eCCEEEEEEe-cCCCHHHHHHHHHHhhC
Confidence 56888888 7887766543 45688999999988763
No 68
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=68.41 E-value=8.2 Score=28.44 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=28.6
Q ss_pred CCCeEEEecCCCCeeeEEe-cCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIR-IDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~-I~~W~~D~I~efL~~kL 154 (163)
+.|.+.|+|.+|+....+. +..++.|.|.+-|..-|
T Consensus 133 H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 133 HGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp CCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred eeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 4578999999999988876 56788888888776544
No 69
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=67.46 E-value=4.6 Score=28.20 Aligned_cols=36 Identities=19% Similarity=0.406 Sum_probs=26.6
Q ss_pred CCCCeEEEecCCCCeeeEEec-CCCCHHHHHHHHHhh
Q 031251 118 NSPPKLIMLDEEGQHKETIRI-DNWKREHMLQFLQEK 153 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I-~~W~~D~I~efL~~k 153 (163)
..-|+++++|.+|+.....++ -..+.+++.++|...
T Consensus 90 ~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 90 LGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp CSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 356999999999987642334 446889999998753
No 70
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=66.66 E-value=2.7 Score=29.36 Aligned_cols=36 Identities=17% Similarity=0.396 Sum_probs=27.4
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
..-|+++++ .+|+...++. -..+.+++.++|.+.|+
T Consensus 88 ~~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 88 RGIPTLLLF-KNGEVAATKV-GALSKGQLKEFLDANLA 123 (123)
T ss_dssp CBSSEEEEE-ESSSEEEEEE-SCCCHHHHHHHHTTTCC
T ss_pred CccCEEEEE-ECCEEEEEEe-CCCCHHHHHHHHHHHhC
Confidence 356888888 8998876543 34688999999988763
No 71
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=66.52 E-value=6.4 Score=29.16 Aligned_cols=62 Identities=18% Similarity=0.241 Sum_probs=41.6
Q ss_pred cchhhhhhhhh-hccCCCeE---E----E------------EecC--CCC---eEEEecCCCCeeeEEecCCCCHHHHHH
Q 031251 94 YPEIVGFIEEE-KDKFPTVR---V----Q------------YVFN--SPP---KLIMLDEEGQHKETIRIDNWKREHMLQ 148 (163)
Q Consensus 94 ~PeVk~FV~~~-~~~f~~L~---v----k------------yv~G--a~P---~L~LlD~~g~~~E~i~I~~W~~D~I~e 148 (163)
-.++++|++++ ...||-+. + . -..| .-| ...|+|.+|+...++. ..-+.++|.+
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~-g~~~~~~l~~ 176 (187)
T 3dwv_A 98 EEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFS-PGASVKDIEE 176 (187)
T ss_dssp TTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEEC-TTCCHHHHHH
T ss_pred HHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEEC-CCCCHHHHHH
Confidence 45789999854 55666542 0 0 1123 346 8899999998887754 4457889999
Q ss_pred HHHhhcCC
Q 031251 149 FLQEKVKP 156 (163)
Q Consensus 149 fL~~kL~~ 156 (163)
.|.+.|+.
T Consensus 177 ~i~~lL~~ 184 (187)
T 3dwv_A 177 KLIPLLGS 184 (187)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhc
Confidence 99888763
No 72
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=66.31 E-value=7.8 Score=25.00 Aligned_cols=36 Identities=11% Similarity=0.269 Sum_probs=26.6
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
..-|.++++ .+|+...++ ....+.+++.++|.+.|+
T Consensus 74 ~~~Pt~~~~-~~g~~~~~~-~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 74 LNIPTTLIF-VNGQLVDSL-VGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp CSSSEEEEE-ETTEEEEEE-ESCCCHHHHHHHHHHHC-
T ss_pred ccCCEEEEE-cCCcEEEee-eccCCHHHHHHHHHHHhC
Confidence 356888888 889777663 234589999999998763
No 73
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=66.08 E-value=2 Score=29.38 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++. +.+.+.+.++|.+.|
T Consensus 84 ~~Pt~~~~-~~G~~~~~~~--G~~~~~l~~~l~~~l 116 (116)
T 3qfa_C 84 SMPTFQFF-KKGQKVGEFS--GANKEKLEATINELV 116 (116)
T ss_dssp SSSEEEEE-SSSSEEEEEE--SCCHHHHHHHHHHHC
T ss_pred cccEEEEE-eCCeEEEEEc--CCCHHHHHHHHHHhC
Confidence 45888887 7898877754 449999999998754
No 74
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=66.03 E-value=5.2 Score=26.30 Aligned_cols=33 Identities=3% Similarity=0.132 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++ .+.+.++|.++|.+.+
T Consensus 74 ~~Pt~~~~-~~G~~~~~~--~G~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 74 ATPTFQFF-RNKVRIDQY--QGADAVGLEEKIKQHL 106 (107)
T ss_dssp SSSEEEEE-ETTEEEEEE--ESSCHHHHHHHHHHHH
T ss_pred cccEEEEE-ECCeEEEEE--eCCCHHHHHHHHHHhc
Confidence 45788887 688766644 4677788999998765
No 75
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=65.80 E-value=4.7 Score=29.89 Aligned_cols=62 Identities=19% Similarity=0.244 Sum_probs=41.8
Q ss_pred chhhhhh-hhhhccCCCeE---E---------------EEecCCCC------eEEEecCCCCeeeEEecCCCCHHHHHHH
Q 031251 95 PEIVGFI-EEEKDKFPTVR---V---------------QYVFNSPP------KLIMLDEEGQHKETIRIDNWKREHMLQF 149 (163)
Q Consensus 95 PeVk~FV-~~~~~~f~~L~---v---------------kyv~Ga~P------~L~LlD~~g~~~E~i~I~~W~~D~I~ef 149 (163)
.++++|+ ++....||-+. . .|-....| ...|+|.+|++..++. -..+.+++.+.
T Consensus 101 ~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~-g~~~~~~l~~~ 179 (190)
T 2vup_A 101 EEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFS-PGASVKDIEKK 179 (190)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEEC-TTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEEC-CCCCHHHHHHH
Confidence 4689999 66665666542 0 01111234 8999999998877653 45678899999
Q ss_pred HHhhcCCC
Q 031251 150 LQEKVKPT 157 (163)
Q Consensus 150 L~~kL~~~ 157 (163)
|.+.|+..
T Consensus 180 i~~ll~~~ 187 (190)
T 2vup_A 180 LIPLLEST 187 (190)
T ss_dssp HHHHHHCC
T ss_pred HHHHHhhc
Confidence 98887654
No 76
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=65.79 E-value=1.9 Score=31.55 Aligned_cols=38 Identities=13% Similarity=0.331 Sum_probs=28.2
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
..-|+++++ .+|++..++. -..+.++|.+||.+.|++.
T Consensus 117 ~~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 117 QGIPAFILF-HKGRELARAA-GARPASELVGFVRGKLGAR 154 (155)
T ss_dssp CSSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHHC--
T ss_pred CcCCEEEEE-eCCeEEEEec-CCCCHHHHHHHHHHHhccC
Confidence 355898888 6897776654 4468999999999988753
No 77
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=69.09 E-value=1.3 Score=31.48 Aligned_cols=55 Identities=15% Similarity=0.351 Sum_probs=35.3
Q ss_pred hhhhhhhhhhccCCCe-----EEEEecC----CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHh
Q 031251 96 EIVGFIEEEKDKFPTV-----RVQYVFN----SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQE 152 (163)
Q Consensus 96 eVk~FV~~~~~~f~~L-----~vkyv~G----a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~ 152 (163)
.+++|++++...||-+ ++...+| .-|.++++|.+|++..+.. +.+.+++.++|..
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~--g~~~~~l~~~l~~ 145 (159)
T 2ls5_A 82 KVLAFAKSTGVTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKLTR--LYNEEEFASLVQQ 145 (159)
Confidence 4778887655555432 2222222 2689999999998887663 4667777777654
No 78
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=65.39 E-value=6.9 Score=25.53 Aligned_cols=36 Identities=11% Similarity=0.406 Sum_probs=26.6
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
..-|+++++ .+|+...++. ...+.+.+.++|.+.++
T Consensus 75 ~~~Pt~~~~-~~g~~~~~~~-g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 75 KGVPQILYF-KDGEYKGKMA-GDVEDDEVEQMIADVLE 110 (111)
T ss_dssp CSSCEEEEE-ETTEEEEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CcCCEEEEE-ECCEEEEEEe-ccCCHHHHHHHHHHHhc
Confidence 356888888 6787665544 45689999999998764
No 79
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=64.73 E-value=12 Score=24.17 Aligned_cols=34 Identities=12% Similarity=0.302 Sum_probs=24.4
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhh
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEK 153 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~k 153 (163)
..-|+++++ .+|+...++ .-..+.++|.+||.++
T Consensus 77 ~~~Pt~~~~-~~g~~~~~~-~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 77 RGYPTLLLF-RGGKKVSEH-SGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp CSSSEEEEE-ETTEEEEEE-CSCCSHHHHHHHHHHH
T ss_pred CcccEEEEE-eCCcEEEec-cCCcCHHHHHHHHHhc
Confidence 356888887 677665543 3447999999999864
No 80
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=63.43 E-value=7.2 Score=27.58 Aligned_cols=64 Identities=14% Similarity=0.260 Sum_probs=42.9
Q ss_pred chhhhhhhhhhccCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEe-cCCCCHHHHHHHHHhhcCCCc
Q 031251 95 PEIVGFIEEEKDKFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIR-IDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~-I~~W~~D~I~efL~~kL~~~~ 158 (163)
+++++|+++....|+-+ ++ +|....-|.++++|.+|+...++. ...|+.+++.+.+.+...+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~~~ 155 (158)
T 3hdc_A 84 KRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGHHH 155 (158)
T ss_dssp SSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC----
T ss_pred HHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccccc
Confidence 36788888665555422 11 233346699999999999877664 468999999999887766543
No 81
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=63.20 E-value=9.9 Score=26.67 Aligned_cols=39 Identities=13% Similarity=0.303 Sum_probs=29.2
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
..-|+++++ .+|+...++ .-..+.++|.+||.+.+++..
T Consensus 108 ~~~Pt~~~~-~~G~~~~~~-~G~~~~~~l~~~l~~~l~~~~ 146 (148)
T 3p2a_A 108 RSIPTIMLY-RNGKMIDML-NGAVPKAPFDNWLDEQLSRDP 146 (148)
T ss_dssp CSSSEEEEE-ETTEEEEEE-SSCCCHHHHHHHHHHHHHSCC
T ss_pred CccCEEEEE-ECCeEEEEE-eCCCCHHHHHHHHHHHhcccC
Confidence 355888888 588776644 345789999999999887643
No 82
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=62.90 E-value=11 Score=24.28 Aligned_cols=34 Identities=24% Similarity=0.498 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|++++++ +|+...++ ....+.+++.++|.+.|
T Consensus 73 ~~Pt~~~~~-~G~~~~~~-~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 73 SIPTLIVFK-DGQPVDKV-VGFQPKENLAEVLDKHL 106 (106)
T ss_dssp SBSEEEEEE-TTEEEEEE-ESCCCHHHHHHHHHTTC
T ss_pred ccCEEEEEe-CCeEEEEE-eCCCCHHHHHHHHHHhC
Confidence 458888886 88776643 34567899999998764
No 83
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=62.17 E-value=3.2 Score=30.54 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=29.1
Q ss_pred CCCeEEEecCCCCeeeEEecC---------CCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIMLDEEGQHKETIRID---------NWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~---------~W~~D~I~efL~~kL~~ 156 (163)
.-|+++++|.+|++..++.=. .++.+++.+.|.+.++.
T Consensus 103 ~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 103 YIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp CSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred cCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHh
Confidence 479999999999887654321 38999999999876654
No 84
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=61.96 E-value=4.3 Score=28.76 Aligned_cols=37 Identities=11% Similarity=0.096 Sum_probs=28.3
Q ss_pred cCCCCeEEEecCCCCeeeEEec-CCCCHHHHHHHHHhhc
Q 031251 117 FNSPPKLIMLDEEGQHKETIRI-DNWKREHMLQFLQEKV 154 (163)
Q Consensus 117 ~Ga~P~L~LlD~~g~~~E~i~I-~~W~~D~I~efL~~kL 154 (163)
..+.|.++++| +|+...++.= ..|+.++|.+.|.+.|
T Consensus 135 i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ll 172 (172)
T 2k6v_A 135 VDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQALL 172 (172)
T ss_dssp EEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHCC
T ss_pred EecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHhC
Confidence 34569999999 9988777642 2679999999987643
No 85
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=61.86 E-value=12 Score=25.03 Aligned_cols=35 Identities=14% Similarity=0.294 Sum_probs=25.5
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.-|+++++ .+|+...++. +...+++.++|.+.+..
T Consensus 87 ~~Pt~~~~-~~G~~~~~~~--G~~~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 87 AMPTFLFM-KEGDVKDRVV--GAIKEELTAKVGLHAAA 121 (122)
T ss_dssp SSSEEEEE-ETTEEEEEEE--SSCHHHHHHHHHHHHSC
T ss_pred cccEEEEE-eCCEEEEEEe--CcCHHHHHHHHHHHhcc
Confidence 45787776 7887766544 43499999999988764
No 86
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=61.84 E-value=11 Score=25.12 Aligned_cols=36 Identities=8% Similarity=0.251 Sum_probs=25.6
Q ss_pred CCCeEEEecCCCCeeeEEecCC-CCHHHHHHHHHhhcCCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDN-WKREHMLQFLQEKVKPT 157 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~-W~~D~I~efL~~kL~~~ 157 (163)
.-|+++++ .+|+...++ .+ .+.+.+.++|...+.+.
T Consensus 72 ~~Pt~~~~-~~G~~v~~~--~G~~~~~~l~~~~~~~~~~~ 108 (110)
T 2l6c_A 72 RVPTLVFI-RDGKVAKVF--SGIMNPRELQALYASIHHHH 108 (110)
T ss_dssp SSCEEEEE-ESSSEEEEE--ESCCCHHHHHHHHHTC----
T ss_pred ccCEEEEE-ECCEEEEEE--cCCCCHHHHHHHHHHHhhhc
Confidence 56888888 889876654 35 79999999999887764
No 87
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=61.01 E-value=9.5 Score=27.76 Aligned_cols=39 Identities=13% Similarity=0.307 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~ 159 (163)
+-|+++++ .+|++..++. -..+.++|.++|.+.+.+...
T Consensus 91 ~iPT~~~f-k~G~~v~~~~-G~~~~~~l~~~i~~~l~~~~~ 129 (142)
T 2es7_A 91 RFPATLVF-TDGKLRGALS-GIHPWAELLTLMRSIVDTPAA 129 (142)
T ss_dssp SSSEEEEE-SCC----CEE-SCCCHHHHHHHHHHHHC----
T ss_pred cCCeEEEE-eCCEEEEEEe-CCCCHHHHHHHHHHHhccccc
Confidence 55888888 8998777653 345789999999998876543
No 88
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=60.67 E-value=13 Score=24.27 Aligned_cols=37 Identities=16% Similarity=0.346 Sum_probs=26.9
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
..-|+++++ .+|+...++. ...+.+++.++|.+.+..
T Consensus 78 ~~~Pt~~~~-~~G~~~~~~~-g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 78 EGVPALRLV-KGEQILDSTE-GVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp CSSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHHC-
T ss_pred CceeEEEEE-cCCEEEEEec-CCCCHHHHHHHHHHHhcC
Confidence 356888888 8897666443 345789999999987753
No 89
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=60.48 E-value=20 Score=23.12 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++. ...+.+++.++|.+.|
T Consensus 73 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 73 SIPTIMVF-KGGKKCETII-GAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSCEEEEE-SSSSEEEEEE-SCCCHHHHHHHHHHHC
T ss_pred cCCEEEEE-eCCEEEEEEe-CCCCHHHHHHHHHHHh
Confidence 55887776 6887766543 4467899999998866
No 90
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=60.16 E-value=12 Score=25.18 Aligned_cols=34 Identities=12% Similarity=0.340 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++. ...+.+.+.++|.+.|
T Consensus 85 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 85 AVPTVLAM-KNGDVVDKFV-GIKDEDQLEAFLKKLI 118 (119)
T ss_dssp SSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHH
T ss_pred cccEEEEE-eCCcEEEEEc-CCCCHHHHHHHHHHHh
Confidence 46888888 7887766443 3458999999998765
No 91
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=59.97 E-value=12 Score=24.35 Aligned_cols=34 Identities=6% Similarity=0.274 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.-|+++++ .+|+...++. +-+.+++.++|.+.|.
T Consensus 78 ~~Pt~~~~-~~G~~~~~~~--G~~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 78 AMPTFHVY-KDGVKADDLV--GASQDKLKALVAKHAA 111 (112)
T ss_dssp BSSEEEEE-ETTEEEEEEE--SCCHHHHHHHHHHHHC
T ss_pred cccEEEEE-ECCeEEEEEc--CCCHHHHHHHHHHHhc
Confidence 45787766 6887766543 4489999999998764
No 92
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=59.07 E-value=10 Score=28.50 Aligned_cols=41 Identities=20% Similarity=0.368 Sum_probs=30.8
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcccc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSASA 161 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~~~ 161 (163)
.-|+++++ .+|+...++. -.++.++|.+||.+.|.+....+
T Consensus 168 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~i~~~l~~~~~~i 208 (210)
T 3apq_A 168 SYPSLFIF-RSGMAAVKYN-GDRSKESLVAFAMQHVRSTVTEL 208 (210)
T ss_dssp SSSEEEEE-CTTSCCEECC-SCCCHHHHHHHHHHHHHCCSSCC
T ss_pred cCCeEEEE-ECCCceeEec-CCCCHHHHHHHHHHhCcccceec
Confidence 45888888 8887654432 34799999999999998765544
No 93
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=58.34 E-value=3.4 Score=27.97 Aligned_cols=39 Identities=15% Similarity=0.410 Sum_probs=29.1
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCccc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSAS 160 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~~ 160 (163)
.-|+++++ .+|++..+ +.+.+.+++.++|.+.+....+.
T Consensus 89 ~~Pt~~~~-~~g~~~~~--~~g~~~~~l~~~l~~~~~~~~~~ 127 (130)
T 1wmj_A 89 AMPTFLFI-KDGAEADK--VVGARKDDLQNTIVKHVGATAAS 127 (130)
T ss_dssp SSCCCCBC-TTTTCCBC--CCTTCTTTHHHHHHHHTSSSCSS
T ss_pred ccceEEEE-eCCeEEEE--EeCCCHHHHHHHHHHHHhccCCC
Confidence 45777776 78877654 45678899999999988766543
No 94
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=58.07 E-value=3.9 Score=30.12 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=39.8
Q ss_pred chhhhhhhh-hhccCCCeE---E---------EEecCCCC-------eEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 95 PEIVGFIEE-EKDKFPTVR---V---------QYVFNSPP-------KLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 95 PeVk~FV~~-~~~~f~~L~---v---------kyv~Ga~P-------~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.++++|+++ ....||-+. . +|.....| ...++|.+|++..++. ...+.++|.+.|.+.|
T Consensus 102 ~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~-g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 102 KEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWD-PTVSVEEVRPQITALV 180 (181)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEEC-TTSCHHHHHHHHHTTC
T ss_pred HHHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeC-CCCCHHHHHHHHHHHh
Confidence 478999997 666676542 0 11111235 7899999998887753 4457788888887655
No 95
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=57.98 E-value=2.5 Score=26.46 Aligned_cols=30 Identities=17% Similarity=0.406 Sum_probs=22.0
Q ss_pred CCCeEEEecCCCCeeeEEecCC-CCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDN-WKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~-W~~D~I~efL~~kL~ 155 (163)
.-|++++ +|+. ++.+ .+.+++.++|.+.|+
T Consensus 55 ~~Pt~~~---~G~~----~~~G~~~~~~l~~~l~~~le 85 (85)
T 1nho_A 55 AVPAIAI---NGVV----RFVGAPSREELFEAINDEME 85 (85)
T ss_dssp CSSEEEE---TTTE----EEECSSCCHHHHHHHHHHCC
T ss_pred eeCEEEE---CCEE----EEccCCCHHHHHHHHHHHhC
Confidence 4688777 7765 3334 488999999998764
No 96
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=57.95 E-value=16 Score=24.78 Aligned_cols=33 Identities=12% Similarity=0.302 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|++++++ +|+...++ .+++.+++.++|.+.|
T Consensus 88 ~~Pt~~~~~-~G~~~~~~--~G~~~~~l~~~l~~~l 120 (121)
T 2j23_A 88 AMPTFVFFK-NGQKIDTV--VGADPSKLQAAITQHS 120 (121)
T ss_dssp SSSEEEEEE-TTEEEEEE--ESSCHHHHHHHHHHHT
T ss_pred cccEEEEEE-CCeEEeeE--cCCCHHHHHHHHHHhh
Confidence 567888774 88776654 4569999999998765
No 97
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=57.93 E-value=15 Score=24.28 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=24.1
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++ .+.+.+++.++|.+.+
T Consensus 79 ~~Pt~~~~-~~G~~~~~~--~G~~~~~l~~~l~~~l 111 (112)
T 1syr_A 79 SMPTFKVY-KNGSSVDTL--LGANDSALKQLIEKYA 111 (112)
T ss_dssp SSSEEEEE-ETTEEEEEE--ESCCHHHHHHHHHTTC
T ss_pred cccEEEEE-ECCcEEEEE--eCCCHHHHHHHHHHhh
Confidence 45777776 588776654 3449999999998765
No 98
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=57.70 E-value=11 Score=24.31 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++. ...+.+++.++|.+.|
T Consensus 71 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 71 SIPTLILF-KGGRPVKQLI-GYQPKEQLEAQLADVL 104 (105)
T ss_dssp SSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHTTTTT
T ss_pred cccEEEEE-eCCeEEEEEe-cCCCHHHHHHHHHHHh
Confidence 46888888 7887766543 3456788999987765
No 99
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=57.58 E-value=13 Score=26.12 Aligned_cols=61 Identities=16% Similarity=0.321 Sum_probs=41.4
Q ss_pred chhhhhhh-hhhccCCCeE---E-----E--E---------ec-CCCC---eEEEecCCCCeeeEEecCCCCHHHHHHHH
Q 031251 95 PEIVGFIE-EEKDKFPTVR---V-----Q--Y---------VF-NSPP---KLIMLDEEGQHKETIRIDNWKREHMLQFL 150 (163)
Q Consensus 95 PeVk~FV~-~~~~~f~~L~---v-----k--y---------v~-Ga~P---~L~LlD~~g~~~E~i~I~~W~~D~I~efL 150 (163)
.++++|++ ++...||.+. . . | +. ..-| ...++|.+|+...++ ....+.+++.+.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~-~g~~~~~~l~~~i 163 (170)
T 2p5q_A 85 DQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRY-YPTTSPLSLERDI 163 (170)
T ss_dssp HHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEE-CTTSCGGGGHHHH
T ss_pred HHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEee-CCCCCHHHHHHHH
Confidence 46889998 5555666551 0 0 1 11 2235 899999999888765 3466788999999
Q ss_pred HhhcCC
Q 031251 151 QEKVKP 156 (163)
Q Consensus 151 ~~kL~~ 156 (163)
.+.|+.
T Consensus 164 ~~ll~~ 169 (170)
T 2p5q_A 164 KQLLEI 169 (170)
T ss_dssp HHHTTC
T ss_pred HHHhhc
Confidence 887753
No 100
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=57.22 E-value=14 Score=27.60 Aligned_cols=37 Identities=11% Similarity=0.262 Sum_probs=28.2
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
.-|++++++ +|+... ....++.+.|.+||.+++.+..
T Consensus 204 ~~Pt~~~~~-~g~~~~--~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 204 GYPTLKIFR-KGRPYD--YNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp SSSEEEEEE-TTEEEE--CCSCCSHHHHHHHHHHHTTCTT
T ss_pred ccCEEEEEE-CCeEEE--ecCCCCHHHHHHHHHhhhCCCC
Confidence 358888887 465543 4567899999999999998753
No 101
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=56.93 E-value=11 Score=24.64 Aligned_cols=35 Identities=11% Similarity=0.334 Sum_probs=25.8
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
..-|+++++ .+|+...++. +.+.+.+.++|.+.+.
T Consensus 78 ~~~Pt~~~~-~~G~~~~~~~--g~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 78 EAMPTFIFL-KDGKLVDKTV--GADKDGLPTLVAKHAT 112 (113)
T ss_dssp SSTTEEEEE-ETTEEEEEEE--CCCTTHHHHHHHHHHH
T ss_pred CcccEEEEE-eCCEEEEEEe--cCCHHHHHHHHHHhhc
Confidence 356888777 6887766543 5788999999988763
No 102
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=56.73 E-value=16 Score=25.32 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=26.9
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.-|+++++ .+|+...++. -..+.+++.+||.+.|+.
T Consensus 104 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 104 SVPTLVLF-RRGAPVATWV-GASPRRVLEERLRPYLEG 139 (140)
T ss_dssp SSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHHTC
T ss_pred ccCEEEEE-eCCcEEEEEe-CCCCHHHHHHHHHHHHcc
Confidence 55898888 6887765443 345789999999988764
No 103
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=56.46 E-value=5.6 Score=27.77 Aligned_cols=35 Identities=17% Similarity=0.404 Sum_probs=26.2
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.-|+++++ .+|+...++. -..+.+++.++|.+.|+
T Consensus 94 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 94 GIPTLLLF-KNGEVAATKV-GALSKGQLKEFLDANLA 128 (128)
T ss_dssp SSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHHC
T ss_pred ccCEEEEE-eCCEEEEEEc-CCCCHHHHHHHHHHhhC
Confidence 56888888 8897765543 34588999999988763
No 104
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.64 E-value=11 Score=25.55 Aligned_cols=36 Identities=11% Similarity=0.286 Sum_probs=25.9
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
.-|+++++ .+|+. . ...-..+.+++.+||.+.+.+.
T Consensus 77 ~~Pt~~~~-~~G~~-~-~~~G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 77 ALPTIYHC-KDGEF-R-RYQGPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp SSSEEEEE-ETTEE-E-ECCSCCCHHHHHHHHHTCGGGG
T ss_pred ccCEEEEE-eCCeE-E-EeecCCCHHHHHHHHHHHhhcc
Confidence 56888888 78863 2 2234578999999999887644
No 105
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.63 E-value=15 Score=24.68 Aligned_cols=36 Identities=8% Similarity=0.147 Sum_probs=26.5
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.-|++++++. |+...++ .-..+.+++.+||.+.+..
T Consensus 83 ~~Pt~~~~~~-g~~~~~~-~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 83 GFPTIKIFQK-GESPVDY-DGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp SSSEEEEEET-TEEEEEE-CSCCSHHHHHHHHHHHHHH
T ss_pred eeCeEEEEeC-CCceEEe-cCCCCHHHHHHHHHHHhhc
Confidence 5689999987 7644433 2456899999999988754
No 106
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=55.32 E-value=1.9 Score=30.13 Aligned_cols=71 Identities=13% Similarity=0.178 Sum_probs=42.7
Q ss_pred ccceeEEEEecccccccc-hhhhhhhhhhccCCCe---------EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHH
Q 031251 78 TYSGAILEACMRKLVFYP-EIVGFIEEEKDKFPTV---------RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREH 145 (163)
Q Consensus 78 ~y~~A~LevC~ckL~~~P-eVk~FV~~~~~~f~~L---------~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~ 145 (163)
+|+...+++-.-.+..-+ ++++|++++.-.|+.+ ++ .|-...-|..+++|.+|+...+. -..++
T Consensus 60 ~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~----~~~~~ 135 (143)
T 4fo5_A 60 KFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAAN----VTPEK 135 (143)
T ss_dssp TSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEES----CCHHH
T ss_pred HhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEcc----CCHHH
Confidence 454333333333333333 7889998776666321 11 23233569999999999877653 36788
Q ss_pred HHHHHHh
Q 031251 146 MLQFLQE 152 (163)
Q Consensus 146 I~efL~~ 152 (163)
++++|.+
T Consensus 136 l~~~l~~ 142 (143)
T 4fo5_A 136 LTEILKA 142 (143)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 8888753
No 107
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=54.97 E-value=19 Score=23.02 Aligned_cols=35 Identities=11% Similarity=0.316 Sum_probs=25.2
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
..-|+++++ .+|+...++. -..+.+.+.++|.+.+
T Consensus 73 ~~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 73 RSIPTLMLV-RDGKVIDKKV-GALPKSQLKAWVESAQ 107 (107)
T ss_dssp CSSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHTC
T ss_pred CccCEEEEE-eCCEEEEEec-CCCCHHHHHHHHHhcC
Confidence 356888888 8897766542 3457899999998653
No 108
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=54.18 E-value=19 Score=23.01 Aligned_cols=34 Identities=15% Similarity=0.368 Sum_probs=24.2
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
..-|+++++ .+|+...++ .+.+.+.+.++|.+.|
T Consensus 73 ~~~Pt~~~~-~~G~~~~~~--~g~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 73 SSMPTFVFL-KNGVKVEEF--AGANAKRLEDVIKANI 106 (106)
T ss_dssp CSSSEEEEE-ETTEEEEEE--ESCCHHHHHHHHHHTC
T ss_pred CcccEEEEE-cCCcEEEEE--cCCCHHHHHHHHHHhC
Confidence 346887776 578766544 4578899999998754
No 109
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=53.76 E-value=17 Score=25.44 Aligned_cols=35 Identities=29% Similarity=0.294 Sum_probs=26.7
Q ss_pred CCCCeEEEecCCCCeeeEEe-cC-----CCCHHHHHHHHHhh
Q 031251 118 NSPPKLIMLDEEGQHKETIR-ID-----NWKREHMLQFLQEK 153 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~-I~-----~W~~D~I~efL~~k 153 (163)
-.-|++++++ +|++..++. .. .++.+.|+++|.+.
T Consensus 79 ~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 79 NCLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp SCCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 3568888886 888877764 22 35899999999876
No 110
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=52.59 E-value=13 Score=22.91 Aligned_cols=29 Identities=10% Similarity=0.413 Sum_probs=21.2
Q ss_pred CCCeEEEecCCCCeeeEEecCCC-CHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNW-KREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W-~~D~I~efL~~kL 154 (163)
.-|++++ +|+. .+.+. +.+++.++|.+.|
T Consensus 56 ~~Pt~~~---~G~~----~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 56 AVPTIVI---NGDV----EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp CSSEEEE---TTEE----ECCSSSSSHHHHHHHHHHC
T ss_pred ccCEEEE---CCEE----eeecCCCHHHHHHHHHHhC
Confidence 4588877 7754 45555 8899999998764
No 111
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=57.84 E-value=2.9 Score=28.59 Aligned_cols=46 Identities=22% Similarity=0.308 Sum_probs=30.9
Q ss_pred EEecCCCCeEEEecC-CCCeeeEEecCC-CCHHHHHHHHHhhcCCCcc
Q 031251 114 QYVFNSPPKLIMLDE-EGQHKETIRIDN-WKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 114 kyv~Ga~P~L~LlD~-~g~~~E~i~I~~-W~~D~I~efL~~kL~~~~~ 159 (163)
+|-...-|+++++|. +|+..+...+.+ .+.+++.++|.+.+.+...
T Consensus 73 ~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~ 120 (130)
T 2lst_A 73 RYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKGGA 120 (130)
Confidence 444445799999995 586633334444 5678999999888766543
No 112
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=52.51 E-value=16 Score=23.81 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.-|+++++ .+|+...++. -..+.+++.++|.+.|.
T Consensus 77 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 77 SIPTLNVY-QGGEVAKTIV-GAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp SSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHTHHHHC
T ss_pred cccEEEEE-eCCEEEEEEe-CCCCHHHHHHHHHHHhh
Confidence 55887776 6887766543 44568999999988764
No 113
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=52.35 E-value=3.3 Score=28.39 Aligned_cols=52 Identities=25% Similarity=0.339 Sum_probs=32.2
Q ss_pred hhhhhhhhhhcc-CCCe---------EEEEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHH
Q 031251 96 EIVGFIEEEKDK-FPTV---------RVQYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQ 151 (163)
Q Consensus 96 eVk~FV~~~~~~-f~~L---------~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~ 151 (163)
++++|++++.-. |+.+ .-+|-...-|.++++|.+|+...+.. . .+++++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~-g---~~~~~~~l~ 139 (148)
T 3hcz_A 78 EWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRI-G---YENLDDFLV 139 (148)
T ss_dssp HHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESC-C---GGGHHHHHH
T ss_pred HHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecC-C---HHHHHHHHH
Confidence 788998866443 3321 11233345699999999998877652 2 245555544
No 114
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=51.93 E-value=3.5 Score=29.11 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=23.1
Q ss_pred CCeEEEecC-CCCeeeEEec-CCCCHHHHHHHHHhhc
Q 031251 120 PPKLIMLDE-EGQHKETIRI-DNWKREHMLQFLQEKV 154 (163)
Q Consensus 120 ~P~L~LlD~-~g~~~E~i~I-~~W~~D~I~efL~~kL 154 (163)
-|++++++. +|+. -++.. ...+.+.|.+|+.+.|
T Consensus 79 iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 79 FPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp SSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHH
T ss_pred CCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHH
Confidence 599988875 5654 33322 6788899988876544
No 115
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=51.72 E-value=21 Score=24.50 Aligned_cols=33 Identities=15% Similarity=0.398 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|++..++ .+.+.+++.++|.+.|
T Consensus 91 ~~Pt~~~~-~~G~~~~~~--~G~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 91 AMPTFMFL-KEGKILDKV--VGAKKDELQSTIAKHL 123 (124)
T ss_dssp SSSEEEEE-ETTEEEEEE--ESCCHHHHHHHHHHHC
T ss_pred ccCEEEEE-ECCEEEEEE--eCCCHHHHHHHHHHhc
Confidence 45787776 788776654 3568999999998765
No 116
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=51.68 E-value=16 Score=23.97 Aligned_cols=34 Identities=12% Similarity=0.304 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.-|+++++ .+|+...+ +.+.+.+++.++|.+.+.
T Consensus 76 ~~Pt~~~~-~~G~~~~~--~~G~~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 76 AVPYFIII-HKGTILKE--LSGADPKEYVSLLEDCKN 109 (112)
T ss_dssp SSSEEEEE-ETTEEEEE--ECSCCHHHHHHHHHHHHH
T ss_pred cccEEEEE-ECCEEEEE--ecCCCHHHHHHHHHHHHh
Confidence 55787777 58876654 456678889999988764
No 117
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=50.84 E-value=23 Score=26.16 Aligned_cols=37 Identities=8% Similarity=0.073 Sum_probs=29.9
Q ss_pred CCCeEEEecCCCCeeeEEec---CCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRI---DNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~~kL~ 155 (163)
+.|.+.++|.+|++..+..= ..|+.++|.+.|...+.
T Consensus 131 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 131 ADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp BCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred ccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 67999999999999887743 24788999999887664
No 118
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=50.82 E-value=16 Score=24.17 Aligned_cols=36 Identities=28% Similarity=0.385 Sum_probs=25.9
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.-|+++++. +|+...++. ...+.+++.++|.+.+..
T Consensus 84 ~~Pt~~~~~-~g~~~~~~~-G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 84 SIPTLILFK-DGQPVKRIV-GAKGKAALLRELSDVVPN 119 (121)
T ss_dssp SSSEEEEEE-TTEEEEEEE-SCCCHHHHHHHTCSCCCC
T ss_pred cCCEEEEEE-CCEEEEEec-CCCCHHHHHHHHHHHHhh
Confidence 458888775 887655543 456789999999887754
No 119
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=50.67 E-value=13 Score=26.15 Aligned_cols=34 Identities=12% Similarity=0.065 Sum_probs=26.0
Q ss_pred CeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 121 PKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
|...++|.+|+...++. ...+.+.+.+.|.+.|+
T Consensus 134 P~~~lid~~G~i~~~~~-g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 134 FSKFLVDRQGQPVKRYS-PTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TCEEEECTTSCEEEEEC-TTSCGGGGHHHHHHHHH
T ss_pred ceEEEECCCCCEEEEcC-CCCCHHHHHHHHHHHhc
Confidence 78899999998887753 34566788888877664
No 120
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=50.20 E-value=22 Score=24.11 Aligned_cols=35 Identities=6% Similarity=-0.027 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhh
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEK 153 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~k 153 (163)
.-|++++++..++..-.......+.++|.+||.+.
T Consensus 92 ~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 92 GFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 45888888776643212233568999999999763
No 121
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=49.80 E-value=23 Score=23.53 Aligned_cols=33 Identities=9% Similarity=0.262 Sum_probs=24.1
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++. +-+.+++.++|.+.|
T Consensus 85 ~~Pt~~~~-~~G~~~~~~~--G~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 85 AMPTFIAI-KNGEKVGDVV--GASIAKVEDMIKKFI 117 (117)
T ss_dssp SSSEEEEE-ETTEEEEEEE--SSCHHHHHHHHHHHC
T ss_pred ccceEEEE-eCCcEEEEEe--CCCHHHHHHHHHHhC
Confidence 45787776 6887766553 468899999998754
No 122
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=49.79 E-value=15 Score=28.64 Aligned_cols=35 Identities=6% Similarity=-0.045 Sum_probs=28.1
Q ss_pred CeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 121 PKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
|+-.|+|.+|++..++. ...+.++|.+.|...|..
T Consensus 178 pttfLID~~G~vv~~~~-g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWS-HRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp TCEEEECTTSCEEEEEC-TTSCHHHHHHHHHHHGGG
T ss_pred ceEEEECCCCeEEEEeC-CCCCHHHHHHHHHHHHHH
Confidence 68899999999888764 456778899988887753
No 123
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=49.67 E-value=46 Score=25.39 Aligned_cols=40 Identities=5% Similarity=0.076 Sum_probs=29.4
Q ss_pred CCCeEEEecCCCCe--eeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 119 SPPKLIMLDEEGQH--KETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 119 a~P~L~LlD~~g~~--~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
.-|++++++..+.. ...+.+.+-+.+.|.++|.+.|+...
T Consensus 89 ~~Pt~~~~~~g~~~~~g~~~~~~g~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 89 GFPTVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDALESHH 130 (244)
T ss_dssp SSSEEEEECTTCCSSSCEECCCTTCCHHHHHHHHHHHHHTCT
T ss_pred ccCEEEEEeCCCcCCCCeeEecCCCCHHHHHHHHHHHHHhcc
Confidence 56999999974332 23346777899999999999887654
No 124
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=48.65 E-value=8.3 Score=32.73 Aligned_cols=59 Identities=8% Similarity=0.076 Sum_probs=40.2
Q ss_pred hhhhhhhhhhccCCCe-----EE--EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 96 EIVGFIEEEKDKFPTV-----RV--QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 96 eVk~FV~~~~~~f~~L-----~v--kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
++++|++++...||-+ ++ +|....-|.++|+|.+|++..++. -..+.+++.++|.+.|.
T Consensus 134 ~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~-G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 134 NVAKGAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKF-GEGDYNVTETLVRQLLN 199 (352)
T ss_dssp HHHHHHHHHTCCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEEE-SBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEc-CCCCHHHHHHHHHHHHh
Confidence 6888988776666532 11 122234499999999998877653 23467888888887664
No 125
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=48.30 E-value=6.6 Score=28.09 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=36.0
Q ss_pred cccchhhhhhhhhhccCCCe-----EEEEe------cCCCCeEEEecCCCCeeeEEec---CCCCHHHHHHHHH
Q 031251 92 VFYPEIVGFIEEEKDKFPTV-----RVQYV------FNSPPKLIMLDEEGQHKETIRI---DNWKREHMLQFLQ 151 (163)
Q Consensus 92 ~~~PeVk~FV~~~~~~f~~L-----~vkyv------~Ga~P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~ 151 (163)
..-.++++|++++...|+-+ ++... .++-|...++|.+|+...+..= .....+++.+.|.
T Consensus 72 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 72 DDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp CCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 33347888988765555432 11111 2237999999999988877654 2334455555544
No 126
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=48.15 E-value=14 Score=26.96 Aligned_cols=60 Identities=15% Similarity=0.299 Sum_probs=37.1
Q ss_pred chhhhhhhh-hhccCCCeE---EE-------Ee-----cCCCCe----EEEecCCCCeeeEEec-CCCCH--HHHHHHHH
Q 031251 95 PEIVGFIEE-EKDKFPTVR---VQ-------YV-----FNSPPK----LIMLDEEGQHKETIRI-DNWKR--EHMLQFLQ 151 (163)
Q Consensus 95 PeVk~FV~~-~~~~f~~L~---vk-------yv-----~Ga~P~----L~LlD~~g~~~E~i~I-~~W~~--D~I~efL~ 151 (163)
.++++|+++ ....|+.+. +. |. .|..|. ..|+|.+|+...++.- ..+.. +.|.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 91 KEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 478999998 777776542 10 11 234676 8899999998887642 22222 55666665
Q ss_pred hhc
Q 031251 152 EKV 154 (163)
Q Consensus 152 ~kL 154 (163)
+.+
T Consensus 171 ~~~ 173 (180)
T 3kij_A 171 QVI 173 (180)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 127
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=47.15 E-value=17 Score=28.05 Aligned_cols=34 Identities=3% Similarity=-0.040 Sum_probs=26.8
Q ss_pred CeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 121 PKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
|+..|+|.+|++..++. ..++.++|.+.+...|.
T Consensus 160 ~ttflID~~G~i~~~~~-g~~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 160 FEKFLVGPDGIPIMRWH-HRTTVSNVKMDILSYMR 193 (207)
T ss_dssp TCEEEECTTSCEEEEEC-TTSCHHHHHHHHHHHHH
T ss_pred ceEEEECCCCcEEEEEC-CCCCHHHHHHHHHHHHh
Confidence 78899999999888764 45677888888877654
No 128
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=46.98 E-value=20 Score=24.81 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=25.7
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.-|+++++ .+|+...++ .+.+.++|.++|.+.++
T Consensus 90 ~~Pt~~i~-~~G~~~~~~--~G~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 90 QLPTFIIA-RSGKMLGHV--IGANPGMLRQKLRDIIK 123 (125)
T ss_dssp SSSEEEEE-ETTEEEEEE--ESSCHHHHHHHHHHHHH
T ss_pred cccEEEEE-eCCeEEEEE--eCCCHHHHHHHHHHHhc
Confidence 55787776 788776654 45788999999988764
No 129
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=46.97 E-value=29 Score=24.35 Aligned_cols=61 Identities=21% Similarity=0.193 Sum_probs=36.3
Q ss_pred ccchhhhhhhhhhccCCCe-----------EEEE--------ecCCCCeEEEecCCCCeeeEEecC--CCCHHHHHHHHH
Q 031251 93 FYPEIVGFIEEEKDKFPTV-----------RVQY--------VFNSPPKLIMLDEEGQHKETIRID--NWKREHMLQFLQ 151 (163)
Q Consensus 93 ~~PeVk~FV~~~~~~f~~L-----------~vky--------v~Ga~P~L~LlD~~g~~~E~i~I~--~W~~D~I~efL~ 151 (163)
.-..+++|++++...|+-+ .+.+ ..|..|...++|.+|+......-. ....++|.+.|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~ 158 (163)
T 3gkn_A 79 SVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALK 158 (163)
T ss_dssp CHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHH
Confidence 3346888888765555432 1111 112379999999999998777221 223356666665
Q ss_pred hh
Q 031251 152 EK 153 (163)
Q Consensus 152 ~k 153 (163)
+.
T Consensus 159 ~l 160 (163)
T 3gkn_A 159 AH 160 (163)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 130
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=46.88 E-value=26 Score=25.07 Aligned_cols=34 Identities=12% Similarity=0.246 Sum_probs=27.1
Q ss_pred CCeEEEecCCCCeeeEEec----CCCCHHHHHHHHHhh
Q 031251 120 PPKLIMLDEEGQHKETIRI----DNWKREHMLQFLQEK 153 (163)
Q Consensus 120 ~P~L~LlD~~g~~~E~i~I----~~W~~D~I~efL~~k 153 (163)
.|...++|.+|+......- ..++.++|.+.|.+.
T Consensus 133 ~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 133 ARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred eeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 4999999999999888752 466778888888754
No 131
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=46.07 E-value=15 Score=25.50 Aligned_cols=39 Identities=13% Similarity=0.166 Sum_probs=26.2
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
..-|++++++ +|+...++. -..+.+.+.+++.+.+.+..
T Consensus 91 ~~~Pt~~~~~-~G~~v~~~~-G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 91 EGTPTLVFYK-EGRIVDKLV-GATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp CSSSEEEEEE-TTEEEEEEE-SCCCHHHHHHHHHHHC----
T ss_pred ceeCeEEEEc-CCEEEEEEe-CCCCHHHHHHHHHHHhCCCc
Confidence 3567888888 897776553 45678888888888877643
No 132
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=51.71 E-value=4.3 Score=25.97 Aligned_cols=39 Identities=21% Similarity=0.402 Sum_probs=24.5
Q ss_pred EEecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 114 QYVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 114 kyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
+|....-|.++++ .+|+...++. ...+.+++.++|.+.|
T Consensus 68 ~~~v~~~Pt~~~~-~~g~~~~~~~-g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 68 QYGIRSIPTLLLF-KNGQVVDRLV-GAQPKEALKERIDKHL 106 (106)
Confidence 3434456888888 7886655332 3345778888887643
No 133
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=45.61 E-value=58 Score=24.78 Aligned_cols=49 Identities=20% Similarity=0.218 Sum_probs=38.4
Q ss_pred hccCCCeEEEEecCC------------CCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 105 KDKFPTVRVQYVFNS------------PPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 105 ~~~f~~L~vkyv~Ga------------~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
...++++.|..+... -|.|++++.+| ....+++..=.++.+..||..-.
T Consensus 179 ~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l~~~~ 239 (244)
T 3q6o_A 179 LSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNG-SVSRVPVLMESRSFYTAYLQRLS 239 (244)
T ss_dssp TTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTS-CEEECCCSSSSHHHHHHHHHTC-
T ss_pred hccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCC-CeEeeccccccHHHHHHHHHhCC
Confidence 345577888776652 49999999998 77888999999999999997543
No 134
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=45.33 E-value=39 Score=24.17 Aligned_cols=57 Identities=16% Similarity=0.239 Sum_probs=36.1
Q ss_pred chhhhhhhhhhccCCCe-----------EEEEecC-------CCCeEEEecCCCCeeeEEec----CCCCHHHHHHHHH
Q 031251 95 PEIVGFIEEEKDKFPTV-----------RVQYVFN-------SPPKLIMLDEEGQHKETIRI----DNWKREHMLQFLQ 151 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L-----------~vkyv~G-------a~P~L~LlD~~g~~~E~i~I----~~W~~D~I~efL~ 151 (163)
..+++|++++.-.||-+ .|.+..+ +.|...++|.+|.+.-+..- ...+.|+|.+.|.
T Consensus 76 ~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 76 FSNKAFKEHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVK 154 (157)
T ss_dssp HHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHH
T ss_pred hHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHH
Confidence 35788988766566432 1222222 34677899999988765532 3456788887775
No 135
>3o2i_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Leptospirillum rubarum}
Probab=44.68 E-value=33 Score=25.34 Aligned_cols=52 Identities=17% Similarity=0.290 Sum_probs=33.9
Q ss_pred CCeEEEEecCCC-CeEEEecCCCCeeeEEec---CCCCHHHHHHHHHhhcCCCccc
Q 031251 109 PTVRVQYVFNSP-PKLIMLDEEGQHKETIRI---DNWKREHMLQFLQEKVKPTSAS 160 (163)
Q Consensus 109 ~~L~vkyv~Ga~-P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~~kL~~~~~~ 160 (163)
.||-++-.+|-+ |+--|...+-.+.-+|.+ +.|+.|+.-++|.+.....+++
T Consensus 15 enlyfqgmrgddM~iY~LVSRD~~H~~~I~L~H~~~~TE~EF~~LLLEA~~~sSsS 70 (125)
T 3o2i_A 15 ENLYFQGMRGDDMHIYELVSRDRTHPVRIYLLHSEYWTEDEFYNLLLEAFQRSSAS 70 (125)
T ss_dssp -----------CCEEEEEEEECSSCCEEEEEEESSCCCHHHHHHHHHHHHTTSCSC
T ss_pred cceeeecccCCCceeeeeeccCCCCCeeEEEeccccccHHHHHHHHHHHHHhccCC
Confidence 345566666754 777788777777777776 8999999999999998887764
No 136
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=44.62 E-value=13 Score=28.28 Aligned_cols=39 Identities=15% Similarity=0.359 Sum_probs=29.6
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCcc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSA 159 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~ 159 (163)
.-|++++++ +|+...++. -..+.+++.+||.+.+.....
T Consensus 84 ~~Pt~~~~~-~G~~~~~~~-G~~~~~~l~~~l~~~l~~~~~ 122 (222)
T 3dxb_A 84 GIPTLLLFK-NGEVAATKV-GALSKGQLKEFLDANLAGSAM 122 (222)
T ss_dssp SBSEEEEEE-TTEEEEEEE-SCCCHHHHHHHHHHHSCCSCC
T ss_pred cCCEEEEEE-CCeEEEEec-cccChHHHHHHHHhhcccccc
Confidence 557888875 787766543 457999999999999876654
No 137
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=44.37 E-value=29 Score=28.11 Aligned_cols=38 Identities=13% Similarity=0.299 Sum_probs=29.6
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
...|.|++++..++..-...-..++.+.|.+||.+...
T Consensus 230 ~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 230 SDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRDTFS 267 (298)
T ss_dssp CSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHHHHT
T ss_pred cCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHhhcC
Confidence 34799999998776666655567999999999995443
No 138
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=43.93 E-value=30 Score=21.98 Aligned_cols=35 Identities=17% Similarity=0.391 Sum_probs=23.9
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
..-|+++++ .+|+...++. ...+.+++.++|.+.|
T Consensus 71 ~~~Pt~~~~-~~g~~~~~~~-G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 71 RSIPTVLFF-KNGERKESII-GAVPKSTLTDSIEKYL 105 (105)
T ss_dssp CSSSEEEEE-ETTEEEEEEE-ECCCHHHHHHHHHHHC
T ss_pred CcccEEEEE-eCCeEEEEEe-cCCCHHHHHHHHHhhC
Confidence 356887776 5887665443 3457889999998654
No 139
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=43.81 E-value=24 Score=26.38 Aligned_cols=32 Identities=16% Similarity=0.295 Sum_probs=21.6
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHH
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQ 151 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~ 151 (163)
+.|...++|.+|+....+. ..++.+.+.+-|.
T Consensus 144 ~~~~~~liD~~G~i~~~~~-g~~~~~~~~~~i~ 175 (200)
T 2b7k_A 144 HSIFFYLMDPEGQFVDALG-RNYDEKTGVDKIV 175 (200)
T ss_dssp TCCCEEEECTTSCEEEEEC-TTCCTTHHHHHHH
T ss_pred ecceEEEECCCCcEEEEeC-CCCCHHHHHHHHH
Confidence 5568899999999988763 3455544444443
No 140
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=43.77 E-value=35 Score=24.91 Aligned_cols=59 Identities=17% Similarity=0.092 Sum_probs=35.5
Q ss_pred cchhhhhhhhhhccCCCe-----------EEEEec--------CCCCeEEEecCCCCeeeEEec--CCCCHHHHHHHHHh
Q 031251 94 YPEIVGFIEEEKDKFPTV-----------RVQYVF--------NSPPKLIMLDEEGQHKETIRI--DNWKREHMLQFLQE 152 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L-----------~vkyv~--------Ga~P~L~LlD~~g~~~E~i~I--~~W~~D~I~efL~~ 152 (163)
-..+++|++++...|+-+ .+.+.. +..|...++|.+|+....+.- ...+.++|.+.|..
T Consensus 96 ~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 96 VKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp HHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 346788888766666543 122211 135889999999999887732 12334555555543
No 141
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=43.57 E-value=15 Score=27.26 Aligned_cols=41 Identities=7% Similarity=0.187 Sum_probs=27.8
Q ss_pred CCCCeEEEecCCCCeeeEEec---------CCCCHHHHHHHHHhhcCCCc
Q 031251 118 NSPPKLIMLDEEGQHKETIRI---------DNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I---------~~W~~D~I~efL~~kL~~~~ 158 (163)
...|+++++|.+|++..++.= ...+.+++.+.+...|++-.
T Consensus 99 ~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~~~~ 148 (151)
T 3ph9_A 99 QYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALRLIQ 148 (151)
T ss_dssp CCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHHHHh
Confidence 567999999999988876521 22445666666666666543
No 142
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=43.20 E-value=31 Score=24.26 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=25.6
Q ss_pred CCCeEEEecCCCCeeeEEe-c-----CCCCHHHHHHHHHhh
Q 031251 119 SPPKLIMLDEEGQHKETIR-I-----DNWKREHMLQFLQEK 153 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~-I-----~~W~~D~I~efL~~k 153 (163)
+-|+++++ .+|++..++. . ..+++++|+.+|.+.
T Consensus 73 ~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 73 CLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp GCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 45887776 5788877775 2 368999999999763
No 143
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=42.99 E-value=33 Score=24.21 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=26.2
Q ss_pred CCeEEEecCCCCeeeEEecCCC----CHHHHHHHHHhhc
Q 031251 120 PPKLIMLDEEGQHKETIRIDNW----KREHMLQFLQEKV 154 (163)
Q Consensus 120 ~P~L~LlD~~g~~~E~i~I~~W----~~D~I~efL~~kL 154 (163)
.|...++|.+|+...+..-..+ +.+++.+.|.+.+
T Consensus 128 ~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 128 ARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred eeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 4999999999999888753322 4477888777654
No 144
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=41.49 E-value=44 Score=21.69 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++ ++.+|+...++ .+.+.+++.++|.+.+
T Consensus 78 ~~Pt~~-~~~~G~~~~~~--~G~~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 78 VVPTFK-ILKENSVVGEV--TGAKYDKLLEAIQAAR 110 (111)
T ss_dssp BSSEEE-EESSSSEEEEE--ESSCHHHHHHHHHHHH
T ss_pred eeeEEE-EEeCCcEEEEE--cCCCHHHHHHHHHHhh
Confidence 457754 56899877655 3556899999998754
No 145
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=41.35 E-value=38 Score=22.55 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=23.3
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|++++ +.+|+...++. +.+.+++.++|.+.+
T Consensus 91 ~~Pt~~~-~~~G~~~~~~~--G~~~~~l~~~i~~~~ 123 (124)
T 1faa_A 91 VVPTFKI-LKENSVVGEVT--GAKYDKLLEAIQAAR 123 (124)
T ss_dssp SSSEEEE-EETTEEEEEEE--SSCHHHHHHHHHHHT
T ss_pred eeeEEEE-EeCCcEEEEEc--CCCHHHHHHHHHHhh
Confidence 4577655 47887766544 566899999998654
No 146
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=40.20 E-value=19 Score=26.15 Aligned_cols=32 Identities=9% Similarity=-0.054 Sum_probs=24.1
Q ss_pred CeEEEecCCCCeeeEEecCCCCHHHHHHHHHhh
Q 031251 121 PKLIMLDEEGQHKETIRIDNWKREHMLQFLQEK 153 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~k 153 (163)
|...++|.+|+...++. ...+.++|.+.|.+.
T Consensus 151 P~~~lid~~G~i~~~~~-g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 151 FTKFLIDKNGCVVKRYG-PMEEPLVIEKDLPHY 182 (183)
T ss_dssp TCEEEECTTSCEEEEEC-TTSCTHHHHTTSGGG
T ss_pred ceEEEECCCCCEEEEeC-CCCCHHHHHHHHHHh
Confidence 89999999998888753 456677777766543
No 147
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=39.08 E-value=46 Score=25.77 Aligned_cols=34 Identities=15% Similarity=0.315 Sum_probs=25.6
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
.-|+++++ .+|+...++. ..-+.+.+.++|.+.+
T Consensus 80 ~~Pt~~~~-~~G~~~~~~~-g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 80 AIPTVYLF-QNGQPVDGFQ-GPQPEEAIRALLDXVL 113 (287)
T ss_dssp SSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHS
T ss_pred CCCeEEEE-ECCEEEEEee-CCCCHHHHHHHHHHHc
Confidence 45788888 6887766554 4467889999999887
No 148
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=35.86 E-value=39 Score=22.90 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=23.7
Q ss_pred CCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHh
Q 031251 118 NSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQE 152 (163)
Q Consensus 118 Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~ 152 (163)
..-|+++++ .+|+...++ ....+.+++.++|.+
T Consensus 95 ~~~Pt~~~~-~~G~~~~~~-~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 95 KSLPTIILL-KNKTMLARK-DHFVSSNDLIALIKK 127 (128)
T ss_dssp CSSSEEEEE-ETTEEEEEE-SSCCCHHHHHHHHTT
T ss_pred CCcCEEEEE-ECCEEEEEe-cCCCCHHHHHHHHHh
Confidence 356888888 678665543 345789999999875
No 149
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=35.57 E-value=47 Score=23.00 Aligned_cols=36 Identities=6% Similarity=0.058 Sum_probs=26.4
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
.-|+++++ .+|+...++. -..+.+.+.++|.+.++.
T Consensus 78 ~~Pt~~~~-~~G~~~~~~~-G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 78 GTPTFKFF-CHGRPVWEQV-GQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EESEEEEE-ETTEEEEEEE-SSCCHHHHHHHHHHHHHH
T ss_pred cCCEEEEE-eCCcEEEEEc-CCCCHHHHHHHHHHHhcc
Confidence 34788887 6787665543 446899999999988764
No 150
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=35.56 E-value=38 Score=24.57 Aligned_cols=37 Identities=5% Similarity=0.064 Sum_probs=28.9
Q ss_pred CCCeEEEecCCCCeeeEEecC---CCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRID---NWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~---~W~~D~I~efL~~kL~ 155 (163)
+.|...++|.+|+...+..=. .++.++|.+.|...+.
T Consensus 118 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 118 ADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred eeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 579999999999998877543 3588889888876553
No 151
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=34.29 E-value=45 Score=22.26 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=22.2
Q ss_pred CCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 120 PPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 120 ~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
-|+|++ .+|++.. -..+.+.|.++|...+...
T Consensus 48 vPtl~~--~~G~~v~----g~~~~~~L~~~l~~~~~~~ 79 (87)
T 1ttz_A 48 VPVLRD--PMGRELD----WPFDAPRLRAWLDAAPHAL 79 (87)
T ss_dssp CSEEEC--TTCCEEE----SCCCHHHHHHHHHTCC---
T ss_pred cCeEEE--ECCEEEe----CCCCHHHHHHHHHHHHHHH
Confidence 688877 6787653 4468999999998766543
No 152
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=33.64 E-value=59 Score=24.72 Aligned_cols=37 Identities=16% Similarity=0.200 Sum_probs=28.4
Q ss_pred CCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 120 PPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 120 ~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
-|.|++++..+...-.+.-...+.++|.+|+.+-+..
T Consensus 190 ~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~G 226 (227)
T 4f9z_D 190 LPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSG 226 (227)
T ss_dssp CSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTT
T ss_pred CCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCC
Confidence 3899999876655555555679999999999876543
No 153
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=33.61 E-value=44 Score=24.41 Aligned_cols=36 Identities=8% Similarity=0.220 Sum_probs=27.4
Q ss_pred CCCeEEEecCCCCeeeEEec---CCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRI---DNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~~kL 154 (163)
.-|...++|.+|+......= .+|+.+++.+.|....
T Consensus 120 ~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 120 ALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp ECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred eeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 56999999999988877643 3567888888776543
No 154
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=33.47 E-value=18 Score=23.76 Aligned_cols=16 Identities=13% Similarity=0.463 Sum_probs=14.6
Q ss_pred ecCCCCHHHHHHHHHh
Q 031251 137 RIDNWKREHMLQFLQE 152 (163)
Q Consensus 137 ~I~~W~~D~I~efL~~ 152 (163)
+|..|+.+++.+||..
T Consensus 2 ~v~~Wt~~~V~~WL~~ 17 (78)
T 3bs7_A 2 AVYLWTVSDVLKWYRR 17 (78)
T ss_dssp CGGGCCHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHH
Confidence 5789999999999988
No 155
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=33.03 E-value=42 Score=22.25 Aligned_cols=31 Identities=13% Similarity=0.265 Sum_probs=21.4
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHH
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQ 151 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~ 151 (163)
.-|++++++ +|++..++ .-..+.+.|.+||.
T Consensus 87 ~~Pt~~~~~-~G~~~~~~-~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 87 TVPGFVHIT-DGQINVRC-DSSMSAQEIKDFAG 117 (118)
T ss_dssp SSCEEEEEE-TTEEEEEC-CTTCCHHHHHHHHT
T ss_pred CCCeEEEEE-CCEEEEEe-cCCCCHHHHHHHhh
Confidence 558888774 78666443 23467888998875
No 156
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=32.77 E-value=54 Score=21.93 Aligned_cols=31 Identities=13% Similarity=0.207 Sum_probs=21.8
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHh
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQE 152 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~ 152 (163)
.-|+++++ .+|+...++. +...+.+.++|.+
T Consensus 83 ~~Pt~~~~-~~G~~~~~~~--G~~~~~l~~~l~~ 113 (114)
T 2oe3_A 83 AMPTFVLG-KDGQLIGKII--GANPTALEKGIKD 113 (114)
T ss_dssp SBSEEEEE-ETTEEEEEEE--SSCHHHHHHHHHT
T ss_pred cccEEEEE-eCCeEEEEEe--CCCHHHHHHHHHh
Confidence 55887775 7887766554 4448899988864
No 157
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=32.35 E-value=47 Score=22.31 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCCe-eeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 119 SPPKLIMLDEEGQH-KETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 119 a~P~L~LlD~~g~~-~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
.-|++++++.+|+. .+.-++.+-..++|.+.+.+.--+.
T Consensus 76 ~~Pt~~~~~~~~~~G~~~~~~~G~~~~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 76 SIPALFFVKKEGNEIKTLDQFVGADVSRIKADIEKFKHHH 115 (118)
T ss_dssp SSSEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHHC---
T ss_pred CCCEEEEEeCCCCcceEEEeecCCCHHHHHHHHHHhhhcc
Confidence 56888888774332 2233566888899999998776543
No 158
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=32.28 E-value=9.8 Score=26.73 Aligned_cols=56 Identities=11% Similarity=-0.001 Sum_probs=32.8
Q ss_pred cchhhhhhhhhhccCCCe-------------EEEEecCCCC--eEEEecCCCCeeeEEecCCCCHHHHHHH
Q 031251 94 YPEIVGFIEEEKDKFPTV-------------RVQYVFNSPP--KLIMLDEEGQHKETIRIDNWKREHMLQF 149 (163)
Q Consensus 94 ~PeVk~FV~~~~~~f~~L-------------~vkyv~Ga~P--~L~LlD~~g~~~E~i~I~~W~~D~I~ef 149 (163)
-.++++|++++...|+-+ .+.+..+.-| ...++|.+|+...+..=..+....+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 151 (160)
T 1xvw_A 81 PPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLW 151 (160)
T ss_dssp HHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHH
T ss_pred HHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHH
Confidence 346888888665455421 1222111335 8999999999988876554444334443
No 159
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=32.18 E-value=60 Score=24.71 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=28.2
Q ss_pred CCCeEEEecCCCCeeeEEec---CCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRI---DNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~~kL 154 (163)
.-|...++|.+|+...+..= .+|+.++|.+.|...+
T Consensus 146 ~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 146 ALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 56999999999998877532 2578899998887654
No 160
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=31.89 E-value=34 Score=24.75 Aligned_cols=32 Identities=9% Similarity=0.126 Sum_probs=24.1
Q ss_pred CeEEEecCCCCeeeEEec-CCCCHHHHHHHHHh
Q 031251 121 PKLIMLDEEGQHKETIRI-DNWKREHMLQFLQE 152 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I-~~W~~D~I~efL~~ 152 (163)
|...++|.+|+......- .-++..++.+.|..
T Consensus 130 p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~ 162 (175)
T 1xvq_A 130 RAIVVIGADGNVAYTELVPEIAQEPNYEAALAA 162 (175)
T ss_dssp SEEEEECTTSBEEEEEECSBTTCCCCHHHHHHH
T ss_pred ceEEEECCCCeEEEEEECCCcCCCCCHHHHHHH
Confidence 899999999999888864 33455577777654
No 161
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=31.88 E-value=25 Score=25.65 Aligned_cols=32 Identities=9% Similarity=-0.054 Sum_probs=24.0
Q ss_pred CeEEEecCCCCeeeEEecCCCCHHHHHHHHHhh
Q 031251 121 PKLIMLDEEGQHKETIRIDNWKREHMLQFLQEK 153 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~k 153 (163)
|...|+|.+|+...++. ...+.++|.+.|.+.
T Consensus 153 P~~~lid~~G~i~~~~~-g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 153 FTKFLIDKNGCVVKRYG-PMEEPLVIEKDLPHY 184 (185)
T ss_dssp CCEEEECTTSCEEEEEC-TTSCGGGGGGGHHHH
T ss_pred ceEEEECCCCCEEEeeC-CCCCHHHHHHHHHHh
Confidence 78999999998887753 456667777766654
No 162
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=30.89 E-value=68 Score=23.49 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=27.8
Q ss_pred CCCeEEEecCCCCeeeEEe--cC-CCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIR--ID-NWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~--I~-~W~~D~I~efL~~kL 154 (163)
+-|...++|.+|++..++. +. +++.+++.+.|....
T Consensus 124 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 124 AYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred eeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 4689999999998887753 22 678899999887643
No 163
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=30.52 E-value=40 Score=25.59 Aligned_cols=34 Identities=3% Similarity=0.064 Sum_probs=26.2
Q ss_pred CeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 121 PKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
|+..|+|.+|++..++. ...+.++|.+.|...|.
T Consensus 174 p~tflID~~G~i~~~~~-g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 174 FEKFLVGPDGVPLRRYS-RRFQTIDIEPDIEALLS 207 (208)
T ss_dssp TCEEEECTTSCEEEEEC-TTSCGGGGHHHHHHHHC
T ss_pred ceEEEEcCCCcEEEEeC-CCCCHHHHHHHHHHHhh
Confidence 88899999999988764 44566788888776653
No 164
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=29.08 E-value=67 Score=26.46 Aligned_cols=38 Identities=8% Similarity=0.163 Sum_probs=27.6
Q ss_pred CCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 120 PPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 120 ~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
-|+++++ .+|+...+...-..+.+.|.+|+.+++.+..
T Consensus 83 ~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v 120 (382)
T 2r2j_A 83 YPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQKSDPI 120 (382)
T ss_dssp ESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHHSCCC
T ss_pred CCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhccCCc
Confidence 3777776 4676554334456899999999999998754
No 165
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=28.47 E-value=55 Score=27.87 Aligned_cols=39 Identities=13% Similarity=0.349 Sum_probs=29.2
Q ss_pred CCCeEEEecCCCCeeeEEecCC-CCHHHHHHHHHhhcCCCc
Q 031251 119 SPPKLIMLDEEGQHKETIRIDN-WKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~-W~~D~I~efL~~kL~~~~ 158 (163)
.-|+++++ .+|+..+.....+ .+.+.+.+||.+.+....
T Consensus 431 ~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 431 GYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp SSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred ecCeEEEE-eCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 45888888 6786655555554 799999999999876543
No 166
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=28.46 E-value=23 Score=23.30 Aligned_cols=17 Identities=6% Similarity=0.542 Sum_probs=14.9
Q ss_pred ecCCCCHHHHHHHHHhh
Q 031251 137 RIDNWKREHMLQFLQEK 153 (163)
Q Consensus 137 ~I~~W~~D~I~efL~~k 153 (163)
+|..|+.+++.+||..-
T Consensus 3 ~v~~Ws~~~V~~WL~~l 19 (80)
T 3bs5_B 3 PVSKWSPSQVVDWMKGL 19 (80)
T ss_dssp CGGGCCHHHHHHHHHTS
T ss_pred ccccCCHHHHHHHHHHH
Confidence 57899999999999864
No 167
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=28.02 E-value=65 Score=23.83 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=27.2
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
.-|++++++ +|+... .....+.+++.+|+.+.+.+.
T Consensus 89 ~~Pt~~~~~-~g~~~~--~~g~~~~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 89 GYPTIKILK-KGQAVD--YEGSRTQEEIVAKVREVSQPD 124 (241)
T ss_dssp SSSEEEEEE-TTEEEE--CCSCSCHHHHHHHHHHHHSTT
T ss_pred cCCEEEEEc-CCCccc--ccCcccHHHHHHHHhhccCcc
Confidence 458888886 565552 557789999999999988764
No 168
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=27.89 E-value=24 Score=24.44 Aligned_cols=18 Identities=17% Similarity=0.540 Sum_probs=15.6
Q ss_pred EecCCCCHHHHHHHHHhh
Q 031251 136 IRIDNWKREHMLQFLQEK 153 (163)
Q Consensus 136 i~I~~W~~D~I~efL~~k 153 (163)
-++..|+.|++.+||...
T Consensus 12 ~~v~~WsvedV~~wl~~~ 29 (89)
T 1pk1_B 12 SQPIDWTIEEVIQYIESN 29 (89)
T ss_dssp CCGGGCCHHHHHHHHHHH
T ss_pred CCchhCCHHHHHHHHHHH
Confidence 467899999999999875
No 169
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=27.74 E-value=78 Score=24.35 Aligned_cols=36 Identities=11% Similarity=0.183 Sum_probs=28.3
Q ss_pred CCCeEEEecCCCCeeeEEec---CCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRI---DNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~~kL 154 (163)
..|...++|.+|++.....= ..|+.++|.+.|....
T Consensus 145 ~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 145 ALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 46999999999998887632 3689999998887543
No 170
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=27.66 E-value=25 Score=23.42 Aligned_cols=17 Identities=18% Similarity=0.472 Sum_probs=14.9
Q ss_pred EecCCCCHHHHHHHHHh
Q 031251 136 IRIDNWKREHMLQFLQE 152 (163)
Q Consensus 136 i~I~~W~~D~I~efL~~ 152 (163)
-++..|+.++|.+||..
T Consensus 5 ~~v~~Ws~~~V~~WL~~ 21 (81)
T 3bq7_A 5 RPVHLWGTEEVAAWLEH 21 (81)
T ss_dssp CCGGGCCHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHH
Confidence 36889999999999976
No 171
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=26.89 E-value=27 Score=23.01 Aligned_cols=16 Identities=13% Similarity=0.420 Sum_probs=13.7
Q ss_pred ecCCCCHHHHHHHHHh
Q 031251 137 RIDNWKREHMLQFLQE 152 (163)
Q Consensus 137 ~I~~W~~D~I~efL~~ 152 (163)
.|..|+.+++.+||..
T Consensus 1 ~v~~Ws~~~V~~WL~~ 16 (76)
T 2f3n_A 1 MLQLWSKFDVGDWLES 16 (76)
T ss_dssp CGGGCCHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHH
Confidence 3678999999999975
No 172
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=26.79 E-value=7.4 Score=28.40 Aligned_cols=58 Identities=16% Similarity=0.070 Sum_probs=37.9
Q ss_pred cccchhhhhhhhhhccCCCeEEE-------------EecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHH
Q 031251 92 VFYPEIVGFIEEEKDKFPTVRVQ-------------YVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFL 150 (163)
Q Consensus 92 ~~~PeVk~FV~~~~~~f~~L~vk-------------yv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL 150 (163)
+.+|++++|.++..-.|-.+.|. -+.++.|+++++ .||+.+-+-+--+=+.+.|.+.|
T Consensus 41 ~~~~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 41 NAYDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHHT
T ss_pred HHHHHHHHHhccCCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEE-ECCEEEEEeeccccCHHHHHHhh
Confidence 46788888887422222223332 123357998887 89988888777777777777654
No 173
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=26.10 E-value=88 Score=22.04 Aligned_cols=57 Identities=9% Similarity=-0.008 Sum_probs=34.7
Q ss_pred chhhhhhhhhhc-cCCCeE------EEEecCC--------CCeEEEecCCCCeeeEEecC----CCCHHHHHHHHH
Q 031251 95 PEIVGFIEEEKD-KFPTVR------VQYVFNS--------PPKLIMLDEEGQHKETIRID----NWKREHMLQFLQ 151 (163)
Q Consensus 95 PeVk~FV~~~~~-~f~~L~------vkyv~Ga--------~P~L~LlD~~g~~~E~i~I~----~W~~D~I~efL~ 151 (163)
..+++|++++.. .||-+. +.-.+|. .|...++|.+|+......-. .-+.++|.+.|.
T Consensus 86 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~ 161 (163)
T 1psq_A 86 FAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAK 161 (163)
T ss_dssp HHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHH
Confidence 357888886654 564321 1111222 39999999999998887532 233366666665
No 174
>1chl_A Chlorotoxin; neurotoxin; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 1sis_A
Probab=25.99 E-value=19 Score=21.69 Aligned_cols=17 Identities=24% Similarity=0.876 Sum_probs=13.9
Q ss_pred cccchhhHHHhhhhccc
Q 031251 52 YVKDQELVADCLKCCTE 68 (163)
Q Consensus 52 f~l~~~L~~~C~~CC~~ 68 (163)
|..+......|+.||-.
T Consensus 6 fttdp~m~~kC~~CCGg 22 (36)
T 1chl_A 6 FTTDHQMARKCDDCCGG 22 (36)
T ss_dssp CSCSSSSHHHHHHHHTS
T ss_pred cCCChhHHHHHHHHhCC
Confidence 66777899999999943
No 175
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=25.94 E-value=5.6 Score=29.88 Aligned_cols=38 Identities=11% Similarity=0.099 Sum_probs=27.4
Q ss_pred EecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhc
Q 031251 115 YVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKV 154 (163)
Q Consensus 115 yv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL 154 (163)
|---+-|+|+++ .||+++.++. --.+.+.|.++|.+.|
T Consensus 85 ygV~siPTlilF-kdG~~v~~~v-G~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 85 FGVAVCPSLAVV-QPERTLGVIA-KIQDWSSYLAQIGAML 122 (137)
T ss_dssp HTCCSSSEEEEE-ECCEEEEEEE-SCCCHHHHHHHHHHHH
T ss_pred cCCccCCEEEEE-ECCEEEEEEe-CCCCHHHHHHHHHHHh
Confidence 444466998887 7898888863 3345678888888777
No 176
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=25.61 E-value=35 Score=24.81 Aligned_cols=58 Identities=7% Similarity=0.049 Sum_probs=33.7
Q ss_pred chhhhhhhhhhccCCCe-------------EEEEec----CCCCeEEEecCCCCeeeEEec----CCCCHHHHHHHHHh
Q 031251 95 PEIVGFIEEEKDKFPTV-------------RVQYVF----NSPPKLIMLDEEGQHKETIRI----DNWKREHMLQFLQE 152 (163)
Q Consensus 95 PeVk~FV~~~~~~f~~L-------------~vkyv~----Ga~P~L~LlD~~g~~~E~i~I----~~W~~D~I~efL~~ 152 (163)
..+++|++++.-.||=| ...-.. .+.|...++|.+|.+.-...- ...+.|+|.+-|.+
T Consensus 79 ~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 157 (164)
T 4gqc_A 79 WCLKKFKDENRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANK 157 (164)
T ss_dssp HHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 35788888766556422 111111 135778899999988765432 33455666655543
No 177
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=25.12 E-value=41 Score=22.83 Aligned_cols=33 Identities=12% Similarity=0.212 Sum_probs=22.7
Q ss_pred cCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHh
Q 031251 117 FNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQE 152 (163)
Q Consensus 117 ~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~ 152 (163)
--.-|++++++. |.. .....+.+.+.|.+||.+
T Consensus 90 i~~~Pt~~~~~~-~~~--~~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 90 VTAVPTLLKYGT-PQK--LVESECLQANLVEMLFSE 122 (123)
T ss_dssp CCSSSEEEETTS-SCE--EEGGGGGCHHHHHHHHHC
T ss_pred CCeeCEEEEEcC-Cce--EeccccCCHHHHHHHHhc
Confidence 345689999887 322 223456788999999875
No 178
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=24.49 E-value=1e+02 Score=22.69 Aligned_cols=35 Identities=14% Similarity=0.338 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVK 155 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~ 155 (163)
.-|+++++ .+|+...++ .-..+.+++.++|.+.++
T Consensus 192 ~~Pt~~~~-~~G~~~~~~-~G~~~~~~l~~~l~~~l~ 226 (226)
T 1a8l_A 192 AVPKIVIQ-VNGEDRVEF-EGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp SSCEEEEE-ETTEEEEEE-ESCCCHHHHHHHHHHHHC
T ss_pred ccCeEEEE-eCCceeEEE-cCCCCHHHHHHHHHHhhC
Confidence 45787776 478665433 345677889999988763
No 179
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=24.23 E-value=96 Score=21.93 Aligned_cols=58 Identities=7% Similarity=-0.035 Sum_probs=34.9
Q ss_pred cchhhhhhhhhhc-cCCCe------EEEEecC--------CCCeEEEecCCCCeeeEEecCCC----CHHHHHHHHH
Q 031251 94 YPEIVGFIEEEKD-KFPTV------RVQYVFN--------SPPKLIMLDEEGQHKETIRIDNW----KREHMLQFLQ 151 (163)
Q Consensus 94 ~PeVk~FV~~~~~-~f~~L------~vkyv~G--------a~P~L~LlD~~g~~~E~i~I~~W----~~D~I~efL~ 151 (163)
-..+++|++++.. .|+-+ ++--.+| +.|...++|.+|+.........+ +.++|.+.|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 88 PFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYK 164 (166)
T ss_dssp HHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHh
Confidence 3468889886544 55422 1111112 36999999999999888654433 3355555554
No 180
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=24.11 E-value=17 Score=23.62 Aligned_cols=16 Identities=13% Similarity=0.499 Sum_probs=14.1
Q ss_pred ecCCCCHHHHHHHHHh
Q 031251 137 RIDNWKREHMLQFLQE 152 (163)
Q Consensus 137 ~I~~W~~D~I~efL~~ 152 (163)
+|..|+.+++.+||..
T Consensus 3 ~v~~Ws~~~V~~WL~~ 18 (74)
T 2gle_A 3 MVHEWSVQQVSHWLVG 18 (74)
T ss_dssp CGGGCCSGGGHHHHHH
T ss_pred CcccCCHHHHHHHHHH
Confidence 5789999999999975
No 181
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=24.05 E-value=1.1e+02 Score=22.40 Aligned_cols=35 Identities=9% Similarity=0.079 Sum_probs=27.5
Q ss_pred CCeEEEecCCCCeeeEEec---CCCCHHHHHHHHHhhc
Q 031251 120 PPKLIMLDEEGQHKETIRI---DNWKREHMLQFLQEKV 154 (163)
Q Consensus 120 ~P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~~kL 154 (163)
.|...++|.+|+......- .+|+.++|.+.|....
T Consensus 118 ~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 118 DRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred eeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 5999999999998887642 3578888888887543
No 182
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=23.94 E-value=68 Score=23.47 Aligned_cols=36 Identities=8% Similarity=0.173 Sum_probs=27.5
Q ss_pred CCCeEEEecCCCCeeeEEec---CCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRI---DNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~~kL 154 (163)
+-|...++|.+|+...+..= .+++.++|.+.|....
T Consensus 122 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 122 ALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp ECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 57999999999988887632 2457888888887544
No 183
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=23.76 E-value=60 Score=24.65 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=25.9
Q ss_pred ecCCCCeEEEecCCCCeeeEEe----cCCCCHHHHHHHHHh
Q 031251 116 VFNSPPKLIMLDEEGQHKETIR----IDNWKREHMLQFLQE 152 (163)
Q Consensus 116 v~Ga~P~L~LlD~~g~~~E~i~----I~~W~~D~I~efL~~ 152 (163)
-.+.-|+++++|.+|+..-... -..|+.+...++|..
T Consensus 101 gv~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~ 141 (173)
T 3ira_A 101 GRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPR 141 (173)
T ss_dssp SCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHH
T ss_pred CCCCCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHH
Confidence 3467799999999998766531 235777777766653
No 184
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=23.37 E-value=89 Score=25.24 Aligned_cols=39 Identities=10% Similarity=0.177 Sum_probs=0.0
Q ss_pred CeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCCccccC
Q 031251 121 PKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPTSASAK 162 (163)
Q Consensus 121 P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~~~~~~ 162 (163)
|+++++ .+|+ .....-..+.+.|.+|+.+.+.+....+.
T Consensus 91 Pt~~~~-~~g~--~~~~~G~~~~~~l~~~i~~~~~~~~~~l~ 129 (350)
T 1sji_A 91 GSLYVL-KGDR--TIEFDGEFAADVLVEFLLDLIEDPVEIIN 129 (350)
T ss_dssp TEEEEE-ETTE--EEEECSCCCHHHHHHHHHTTSSCSEEECC
T ss_pred ceEEEE-ECCc--EEEecCCCCHHHHHHHHHHhcCCcceecc
No 185
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=23.29 E-value=1e+02 Score=23.75 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=35.5
Q ss_pred chhhhhhhhh---hccCCCeEEEEecCCC----------------------CeEEEecCCCCeeeEEecCCCCHHHHHHH
Q 031251 95 PEIVGFIEEE---KDKFPTVRVQYVFNSP----------------------PKLIMLDEEGQHKETIRIDNWKREHMLQF 149 (163)
Q Consensus 95 PeVk~FV~~~---~~~f~~L~vkyv~Ga~----------------------P~L~LlD~~g~~~E~i~I~~W~~D~I~ef 149 (163)
+-+++-|+++ ...|-++++..+...+ ..++++|++| ..|+++++.++
T Consensus 15 ~~~~~~i~eY~kRl~~~~~lei~ev~~~k~~~~~~~~~~E~~~il~~i~~~~~vI~LD~~G--------k~~sS~~fA~~ 86 (163)
T 1o6d_A 15 GFIKEGIKHYEKFLRRFCKPEVLEIKRVHRGSIEEIVRKETEDLTNRILPGSFVMVMDKRG--------EEVSSEEFADF 86 (163)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCHHHHHHHHHHHHHTTCCTTCEEEEEEEEE--------EECCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCccCCceEEEecCcccccHHHHHHHHHHHHHHhcCCCCEEEEEcCCC--------CcCCHHHHHHH
Confidence 4355555543 4456667777666521 2478889988 46999999999
Q ss_pred HHhhc
Q 031251 150 LQEKV 154 (163)
Q Consensus 150 L~~kL 154 (163)
|.++.
T Consensus 87 l~~~~ 91 (163)
T 1o6d_A 87 LKDLE 91 (163)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99873
No 186
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=23.02 E-value=1.2e+02 Score=24.37 Aligned_cols=22 Identities=5% Similarity=0.095 Sum_probs=17.8
Q ss_pred ecCCCCHHHHHHHHHhhcCCCc
Q 031251 137 RIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 137 ~I~~W~~D~I~efL~~kL~~~~ 158 (163)
..-..+.+.|.+|+.+++.+..
T Consensus 124 y~G~r~~~~i~~fl~~~~~~~v 145 (298)
T 3ed3_A 124 YSGARTLAPIVDFSLSRIRSYV 145 (298)
T ss_dssp CCSCCSHHHHHHHHHTTCCCCE
T ss_pred ecCCcCHHHHHHHHHHhccccc
Confidence 3467899999999999987653
No 187
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=22.66 E-value=12 Score=28.22 Aligned_cols=41 Identities=10% Similarity=0.250 Sum_probs=28.3
Q ss_pred EecCCCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 115 YVFNSPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 115 yv~Ga~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
|---+-|+|+++ .+|+++.++. ---+.+.|.++|.+.|...
T Consensus 87 ygV~sIPTlilF-k~G~~v~~~~-G~~~k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 87 FGAFRFPATLVF-TGGNYRGVLN-GIHPWAELINLMRGLVEPQ 127 (140)
T ss_dssp HTCCSSSEEEEE-ETTEEEEEEE-SCCCHHHHHHHHHHHHC--
T ss_pred cCCccCCEEEEE-ECCEEEEEEe-cCCCHHHHHHHHHHHhcCC
Confidence 444466888887 7898888764 3356678999998877543
No 188
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=22.52 E-value=1e+02 Score=27.30 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=30.6
Q ss_pred CCCeEEEecC---CCCeeeEEecCCCCHHHHHHHHHhhcCCCc
Q 031251 119 SPPKLIMLDE---EGQHKETIRIDNWKREHMLQFLQEKVKPTS 158 (163)
Q Consensus 119 a~P~L~LlD~---~g~~~E~i~I~~W~~D~I~efL~~kL~~~~ 158 (163)
.-|++++++. +|+ .....+.+.+.++|.++|.+.|+...
T Consensus 89 ~~PTl~~f~~g~~~G~-~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 89 GFPTVRFFQAFTKNGS-GATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp SBSEEEEECTTCCSCC-CEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred ccCEEEEEcCcccCCC-ceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 5589999997 664 33456778999999999999998654
No 189
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=22.32 E-value=1.2e+02 Score=22.97 Aligned_cols=36 Identities=11% Similarity=0.183 Sum_probs=27.7
Q ss_pred CCCeEEEecCCCCeeeEEec---CCCCHHHHHHHHHhhc
Q 031251 119 SPPKLIMLDEEGQHKETIRI---DNWKREHMLQFLQEKV 154 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I---~~W~~D~I~efL~~kL 154 (163)
.-|...++|.+|+...+..- .+++.++|.+.|....
T Consensus 141 ~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 141 SLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 56899999999998887632 3578889888886543
No 190
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=22.06 E-value=35 Score=23.49 Aligned_cols=17 Identities=24% Similarity=0.646 Sum_probs=15.4
Q ss_pred ecCCCCHHHHHHHHHhh
Q 031251 137 RIDNWKREHMLQFLQEK 153 (163)
Q Consensus 137 ~I~~W~~D~I~efL~~k 153 (163)
++..|+.|++.+||.+.
T Consensus 13 ~v~~Ws~edV~~wL~~l 29 (89)
T 1kw4_A 13 PISSWSVDDVSNFIREL 29 (89)
T ss_dssp CGGGCCHHHHHHHHHTS
T ss_pred CchhCCHHHHHHHHHHC
Confidence 78999999999999864
No 191
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=22.05 E-value=99 Score=25.93 Aligned_cols=39 Identities=8% Similarity=0.124 Sum_probs=28.0
Q ss_pred CCCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 119 SPPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 119 a~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
.-|++++++..|+..-....-..+.+++.+||.+.+...
T Consensus 425 ~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 463 (481)
T 3f8u_A 425 GFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNP 463 (481)
T ss_dssp SSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSC
T ss_pred ccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCc
Confidence 458999998877532222334589999999999987643
No 192
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=20.91 E-value=1.1e+02 Score=24.55 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=26.1
Q ss_pred CCCeEEEecCC-CCeeeEEecCCCCHHHHHHHHHhhcCCC
Q 031251 119 SPPKLIMLDEE-GQHKETIRIDNWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 119 a~P~L~LlD~~-g~~~E~i~I~~W~~D~I~efL~~kL~~~ 157 (163)
.-|++++++.+ |+...+.. -..+.+.|.+||.+.-+..
T Consensus 321 ~~Pt~~~~~~~~~~~~~~~~-G~~~~~~l~~~l~~~~~~~ 359 (361)
T 3uem_A 321 SFPTLKFFPASADRTVIDYN-GERTLDGFKKFLESGGQDG 359 (361)
T ss_dssp SSSEEEEECSSSSCCCEECC-SCSSHHHHHHHHTTTSCSC
T ss_pred ccCeEEEEECCCCcceeEec-CCCCHHHHHHHHHhcCCCC
Confidence 44999999655 44333332 4589999999999876543
No 193
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=20.78 E-value=1.4e+02 Score=23.08 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=24.6
Q ss_pred CCeEEEecCCCCeeeEEecCCCCHHHHHHHHHhhcCC
Q 031251 120 PPKLIMLDEEGQHKETIRIDNWKREHMLQFLQEKVKP 156 (163)
Q Consensus 120 ~P~L~LlD~~g~~~E~i~I~~W~~D~I~efL~~kL~~ 156 (163)
+|.++.+|.++ .+=.+.-+..+.++|.+|+.+-+..
T Consensus 194 ~p~~~~~~~~~-~ky~~~~~~~t~~~i~~Fv~~~~~G 229 (250)
T 3ec3_A 194 DVNAAILDESG-KKFAMEPEEFDSDALREFVMAFKKG 229 (250)
T ss_dssp SCEEEEECTTS-CEEECCCCSCCHHHHHHHHHHHHTT
T ss_pred CcEEEEEcCCC-ceecCCcccCCHHHHHHHHHHHHCC
Confidence 57888888665 3333333568999999998765544
No 194
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=20.69 E-value=41 Score=22.95 Aligned_cols=17 Identities=24% Similarity=0.722 Sum_probs=14.7
Q ss_pred EecCCCCHHHHHHHHHh
Q 031251 136 IRIDNWKREHMLQFLQE 152 (163)
Q Consensus 136 i~I~~W~~D~I~efL~~ 152 (163)
-+|..|+.+++.++|..
T Consensus 15 ~~v~~Wt~~dV~~WL~~ 31 (91)
T 1v85_A 15 KAVDKWTTEEVVLWLEQ 31 (91)
T ss_dssp SCGGGCCHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHH
Confidence 36789999999999975
No 195
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=20.57 E-value=1.3e+02 Score=23.13 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=26.3
Q ss_pred CCCeEEEecCCCCee-----------eEEecC---CCCHHHHHHHHHhhcCCC
Q 031251 119 SPPKLIMLDEEGQHK-----------ETIRID---NWKREHMLQFLQEKVKPT 157 (163)
Q Consensus 119 a~P~L~LlD~~g~~~-----------E~i~I~---~W~~D~I~efL~~kL~~~ 157 (163)
+-|+|+++-..+... .+..+. +-+.+.+.+||.+++.+.
T Consensus 103 siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~ 155 (178)
T 3ga4_A 103 NVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNIS 155 (178)
T ss_dssp SSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCC
Confidence 446666665544333 445443 678899999999998754
No 196
>4e74_A Plexin-A4; RBD, structural genomics, structural genomics consor SGC, signaling protein; 1.58A {Homo sapiens} PDB: 3q3j_A*
Probab=20.07 E-value=87 Score=23.09 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=24.4
Q ss_pred ccCCCeEEEEecCCCCeEEEecCCCCeeeEEecCCCCH
Q 031251 106 DKFPTVRVQYVFNSPPKLIMLDEEGQHKETIRIDNWKR 143 (163)
Q Consensus 106 ~~f~~L~vkyv~Ga~P~L~LlD~~g~~~E~i~I~~W~~ 143 (163)
++...+...|..|....++|.|.+...+- ..+|++
T Consensus 60 P~~~~~dLEwr~g~~~~~iL~D~D~ts~~---~~~wkr 94 (117)
T 4e74_A 60 PKAADMDLEWRQGSGARMILQDEDITTKI---ENDWKR 94 (117)
T ss_dssp CCGGGEEEEEECTTSCEEEECSSSTTCCC------CCC
T ss_pred CCCCceeEEEecCCCCceEeecCCCccEe---cCcceE
Confidence 34445888999999999999999885532 356754
Done!