Query 031253
Match_columns 163
No_of_seqs 148 out of 443
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 18:19:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031253.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031253hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wff_A Riken cDNA 2810002D23 p 100.0 1.4E-30 4.9E-35 187.6 0.8 62 96-157 21-83 (85)
2 1wfh_A Zinc finger (AN1-like) 99.9 1.5E-27 5.3E-32 163.7 1.1 53 96-148 11-63 (64)
3 1wg2_A Zinc finger (AN1-like) 99.9 4.2E-27 1.4E-31 161.6 1.5 53 95-147 10-62 (64)
4 1wfl_A Zinc finger protein 216 99.9 4.8E-26 1.6E-30 160.2 4.4 52 95-146 20-71 (74)
5 1wfp_A Zinc finger (AN1-like) 99.9 4.5E-26 1.5E-30 160.3 1.4 54 94-147 19-72 (74)
6 1x4w_A Hypothetical protein FL 99.9 7.3E-26 2.5E-30 156.7 -0.1 53 95-147 10-65 (67)
7 2kzy_A ZNF216-A20, zfand5 prot 99.8 6.5E-20 2.2E-24 125.0 4.8 38 3-40 10-47 (62)
8 2c7n_A Rabex-5, GEF 1, RAB gua 99.7 7E-19 2.4E-23 123.2 3.2 35 3-37 13-47 (74)
9 3oj3_I Tumor necrosis factor a 99.7 1.1E-17 3.6E-22 108.7 3.0 30 5-34 17-47 (49)
10 1wfe_A Riken cDNA 2310008M20 p 99.3 2.9E-13 9.8E-18 97.5 1.5 59 96-163 21-82 (86)
11 1x4v_A Hypothetical protein LO 99.3 5.9E-13 2E-17 91.0 2.1 40 96-136 8-50 (63)
12 1wys_A Riken cDNA 2310008M20 p 99.2 2.8E-12 9.4E-17 90.3 2.0 41 99-140 13-56 (75)
13 2eqe_A Tumor necrosis factor, 98.0 4.7E-06 1.6E-10 53.4 3.1 31 3-33 12-43 (48)
14 1vfy_A Phosphatidylinositol-3- 92.8 0.041 1.4E-06 37.2 1.6 27 101-127 12-41 (73)
15 1wfk_A Zinc finger, FYVE domai 92.1 0.093 3.2E-06 36.9 2.8 29 99-127 8-39 (88)
16 2yw8_A RUN and FYVE domain-con 91.7 0.085 2.9E-06 36.3 2.2 28 100-127 19-49 (82)
17 1joc_A EEA1, early endosomal a 91.5 0.07 2.4E-06 39.7 1.6 28 100-127 69-99 (125)
18 1x4u_A Zinc finger, FYVE domai 91.1 0.13 4.3E-06 35.6 2.5 28 100-127 14-44 (84)
19 1z2q_A LM5-1; membrane protein 90.9 0.12 4E-06 35.8 2.3 28 100-127 21-51 (84)
20 1dvp_A HRS, hepatocyte growth 90.3 0.1 3.6E-06 41.6 1.8 28 100-127 161-191 (220)
21 3t7l_A Zinc finger FYVE domain 90.0 0.13 4.3E-06 36.2 1.8 27 100-126 20-49 (90)
22 3zyq_A Hepatocyte growth facto 89.7 0.2 6.8E-06 40.4 3.0 28 100-127 164-194 (226)
23 1y02_A CARP2, FYVE-ring finger 88.1 0.18 6.2E-06 37.6 1.6 41 100-140 19-65 (120)
24 2vrw_B P95VAV, VAV1, proto-onc 85.7 0.38 1.3E-05 40.9 2.5 40 99-140 356-400 (406)
25 4b6d_A RAC GTPase-activating p 84.9 0.31 1.1E-05 32.1 1.2 23 99-121 18-43 (61)
26 3mpx_A FYVE, rhogef and PH dom 78.2 0.43 1.5E-05 40.6 0.0 28 100-127 375-405 (434)
27 2eqg_A Tumor necrosis factor, 73.9 2.1 7E-05 27.2 2.3 25 8-32 13-38 (49)
28 1ptq_A Protein kinase C delta 71.0 2.1 7.1E-05 26.0 1.8 24 99-122 10-37 (50)
29 3c5k_A HD6, histone deacetylas 70.9 1.6 5.5E-05 31.7 1.5 31 100-134 24-55 (109)
30 2enz_A NPKC-theta, protein kin 69.6 4.6 0.00016 26.1 3.4 25 99-123 22-50 (65)
31 1kbe_A Kinase suppressor of RA 68.9 1.6 5.5E-05 27.5 1.0 22 101-123 15-37 (49)
32 3h0g_L DNA-directed RNA polyme 67.2 2.5 8.5E-05 28.3 1.7 25 98-122 19-47 (63)
33 2fnf_X Putative RAS effector N 65.9 2.9 9.9E-05 28.0 1.8 25 98-122 33-58 (72)
34 2yuu_A NPKC-delta, protein kin 65.2 2.8 9.5E-05 28.5 1.7 25 99-123 27-55 (83)
35 2eqf_A Tumor necrosis factor, 65.2 2.9 0.0001 26.1 1.6 24 8-31 12-35 (46)
36 1faq_A RAF-1; transferase, ser 63.8 2.5 8.4E-05 25.9 1.1 24 99-123 13-37 (52)
37 1rfh_A RAS association (ralgds 63.3 2.6 8.8E-05 27.0 1.1 25 98-122 20-45 (59)
38 2gmg_A Hypothetical protein PF 61.4 3.6 0.00012 30.1 1.7 26 109-136 62-88 (105)
39 3uej_A NPKC-delta, protein kin 61.4 4 0.00014 26.3 1.8 24 99-122 19-46 (65)
40 1r79_A Diacylglycerol kinase, 60.3 4.4 0.00015 28.2 2.0 23 100-122 38-65 (84)
41 1z60_A TFIIH basal transcripti 59.8 2.9 0.0001 27.5 0.9 35 102-136 17-56 (59)
42 1ef4_A Subunit N, DNA-directed 59.5 2.5 8.5E-05 27.7 0.5 13 100-112 3-15 (55)
43 1twf_J DNA-directed RNA polyme 57.4 3.3 0.00011 28.3 0.9 14 99-112 3-16 (70)
44 3ky9_A Proto-oncogene VAV; cal 56.0 4.9 0.00017 36.0 2.0 38 99-138 528-570 (587)
45 2ysj_A Tripartite motif-contai 55.0 13 0.00043 22.8 3.4 26 100-126 20-45 (63)
46 2eli_A Protein kinase C alpha 54.9 8.2 0.00028 26.3 2.6 43 99-141 27-73 (85)
47 1y8f_A UNC-13 homolog A, MUNC1 53.5 6.1 0.00021 25.6 1.7 24 99-122 23-50 (66)
48 2enn_A NPKC-theta, protein kin 51.4 5.2 0.00018 26.8 1.1 25 99-123 33-61 (77)
49 4ayb_N DNA-directed RNA polyme 51.2 4.2 0.00014 27.5 0.6 13 100-112 4-16 (66)
50 2co8_A NEDD9 interacting prote 49.9 11 0.00038 24.8 2.6 29 101-129 43-73 (82)
51 2lce_A B-cell lymphoma 6 prote 49.2 9.9 0.00034 23.4 2.2 27 99-125 16-57 (74)
52 2db6_A SH3 and cysteine rich d 48.9 4.7 0.00016 26.8 0.6 24 99-122 27-54 (74)
53 1wd2_A Ariadne-1 protein homol 48.3 9 0.00031 24.8 1.9 29 99-127 5-40 (60)
54 2ysl_A Tripartite motif-contai 47.4 17 0.00058 22.7 3.1 26 100-126 20-45 (73)
55 2d8t_A Dactylidin, ring finger 43.9 16 0.00054 23.1 2.6 49 99-148 14-65 (71)
56 3f6q_B LIM and senescent cell 41.4 7.1 0.00024 24.4 0.5 27 101-127 40-66 (72)
57 4gzn_C ZFP-57, zinc finger pro 40.8 9.2 0.00031 24.1 1.0 27 99-125 3-44 (60)
58 1x68_A FHL5 protein; four-and- 40.4 13 0.00046 23.8 1.8 28 101-128 36-63 (76)
59 2ecv_A Tripartite motif-contai 40.1 32 0.0011 21.7 3.7 26 100-126 19-44 (85)
60 1vd4_A Transcription initiatio 39.8 11 0.00037 23.0 1.2 26 99-124 13-50 (62)
61 1e0f_I Haemadin, factor IIA; c 39.2 16 0.00054 23.4 1.9 30 111-140 13-42 (57)
62 4gne_A Histone-lysine N-methyl 39.0 14 0.0005 26.6 1.9 27 101-130 59-86 (107)
63 3j21_g 50S ribosomal protein L 38.4 9.9 0.00034 24.3 0.8 24 99-122 13-37 (51)
64 2d8x_A Protein pinch; LIM doma 38.2 8.9 0.00031 24.2 0.6 27 101-127 32-58 (70)
65 2ecj_A Tripartite motif-contai 37.4 32 0.0011 20.3 3.1 26 100-126 15-40 (58)
66 2elq_A Zinc finger protein 406 37.3 13 0.00044 19.3 1.1 13 113-125 8-21 (36)
67 2kwq_A Protein MCM10 homolog; 36.6 14 0.00047 26.3 1.5 21 113-133 47-67 (92)
68 3j21_i 50S ribosomal protein L 36.3 11 0.00036 26.5 0.8 28 98-126 33-66 (83)
69 2ct2_A Tripartite motif protei 36.1 31 0.001 22.2 3.1 27 100-126 15-44 (88)
70 1bbo_A Human enhancer-binding 35.8 18 0.00061 20.7 1.7 11 114-124 29-40 (57)
71 3iz5_m 60S ribosomal protein L 35.0 12 0.00041 26.7 0.9 29 98-127 34-68 (92)
72 3uk3_C Zinc finger protein 217 33.8 19 0.00066 20.6 1.6 25 100-124 4-43 (57)
73 1x61_A Thyroid receptor intera 33.5 13 0.00044 23.5 0.8 27 101-127 34-60 (72)
74 1znf_A 31ST zinc finger from X 33.3 12 0.00042 17.8 0.6 11 115-125 2-13 (27)
75 1x4l_A Skeletal muscle LIM-pro 33.2 13 0.00044 23.5 0.8 27 101-127 36-62 (72)
76 1x64_A Alpha-actinin-2 associa 32.9 12 0.0004 25.0 0.5 24 102-125 53-76 (89)
77 1nyp_A Pinch protein; LIM doma 32.9 12 0.00042 23.2 0.6 27 101-127 32-58 (66)
78 2cot_A Zinc finger protein 435 32.6 46 0.0016 20.4 3.4 27 99-125 17-58 (77)
79 1ard_A Yeast transcription fac 31.6 13 0.00044 17.9 0.5 10 115-124 3-13 (29)
80 2m0d_A Zinc finger and BTB dom 31.6 13 0.00045 17.9 0.5 12 114-125 3-15 (30)
81 2adr_A ADR1; transcription reg 31.5 22 0.00076 20.6 1.6 11 114-124 30-41 (60)
82 2kvh_A Zinc finger and BTB dom 31.4 14 0.00047 17.8 0.6 11 114-124 3-14 (27)
83 2csz_A Synaptotagmin-like prot 31.1 25 0.00084 24.2 1.9 31 99-129 24-58 (76)
84 2lvu_A Zinc finger and BTB dom 37.0 10 0.00036 18.1 0.0 13 114-126 2-15 (26)
85 2kvf_A Zinc finger and BTB dom 30.8 14 0.00049 17.8 0.5 12 114-125 3-15 (28)
86 2row_A RHO-associated protein 30.8 13 0.00046 25.7 0.6 41 99-139 34-83 (84)
87 2elx_A Zinc finger protein 406 30.7 17 0.00057 18.5 0.9 11 114-124 7-18 (35)
88 1jm7_B BARD1, BRCA1-associated 30.6 22 0.00074 24.8 1.7 38 100-138 22-61 (117)
89 1g47_A Pinch protein; LIM doma 30.5 13 0.00045 23.7 0.5 25 102-126 41-65 (77)
90 2m0f_A Zinc finger and BTB dom 30.4 14 0.00049 17.6 0.5 12 114-125 2-14 (29)
91 2ecw_A Tripartite motif-contai 30.3 55 0.0019 20.6 3.5 26 100-126 19-44 (85)
92 2gqj_A Zinc finger protein KIA 30.3 15 0.0005 24.3 0.7 27 99-125 23-66 (98)
93 2ctd_A Zinc finger protein 512 30.2 18 0.00063 24.2 1.2 11 100-110 34-44 (96)
94 2elo_A Zinc finger protein 406 29.9 18 0.0006 18.8 0.9 11 114-124 9-20 (37)
95 1srk_A Zinc finger protein ZFP 29.9 17 0.0006 18.6 0.9 11 114-124 7-18 (35)
96 2kvg_A Zinc finger and BTB dom 29.6 14 0.00048 18.0 0.4 11 114-124 3-14 (27)
97 1p7a_A BF3, BKLF, kruppel-like 29.5 20 0.00067 18.6 1.0 10 114-123 11-21 (37)
98 3cc2_Z 50S ribosomal protein L 29.5 12 0.00041 27.8 0.1 30 98-127 58-92 (116)
99 1klr_A Zinc finger Y-chromosom 29.4 15 0.00052 17.6 0.5 11 115-125 3-14 (30)
100 1x4k_A Skeletal muscle LIM-pro 29.2 16 0.00053 23.0 0.6 27 101-127 34-60 (72)
101 1e4u_A Transcriptional repress 29.2 19 0.00066 23.9 1.2 39 100-138 11-56 (78)
102 2ehe_A Four and A half LIM dom 29.1 26 0.00089 22.6 1.8 28 101-128 44-71 (82)
103 2ecy_A TNF receptor-associated 29.0 36 0.0012 20.9 2.4 40 100-140 15-58 (66)
104 1paa_A Yeast transcription fac 28.8 15 0.00053 17.8 0.5 11 115-125 3-14 (30)
105 2m0e_A Zinc finger and BTB dom 28.5 16 0.00054 17.4 0.5 13 114-126 2-15 (29)
106 1yop_A KTI11P; zinc finger, me 28.5 14 0.00048 25.7 0.4 15 112-126 21-35 (83)
107 2zet_C Melanophilin; complex, 28.5 22 0.00076 27.1 1.5 30 99-128 67-100 (153)
108 2uzg_A Ubiquitin carboxyl-term 28.1 29 0.001 24.2 2.0 31 100-133 25-58 (97)
109 1x6e_A Zinc finger protein 24; 28.1 22 0.00075 21.7 1.2 26 99-124 13-53 (72)
110 2ea6_A Ring finger protein 4; 27.7 31 0.0011 21.0 1.9 27 100-126 15-47 (69)
111 1wyh_A SLIM 2, skeletal muscle 27.5 17 0.0006 22.7 0.7 27 101-127 34-60 (72)
112 2jr7_A DPH3 homolog; DESR1, CS 27.5 16 0.00054 25.8 0.5 13 112-124 21-33 (89)
113 1x62_A C-terminal LIM domain p 27.5 10 0.00035 24.6 -0.5 25 102-126 43-67 (79)
114 1ffk_W Ribosomal protein L37AE 27.0 21 0.00072 24.3 1.0 30 97-126 24-58 (73)
115 2cu8_A Cysteine-rich protein 2 27.0 25 0.00084 22.4 1.3 25 101-125 37-61 (76)
116 2d8z_A Four and A half LIM dom 26.9 19 0.00064 22.5 0.7 26 101-126 32-57 (70)
117 2elt_A Zinc finger protein 406 26.9 22 0.00077 18.2 1.0 11 114-124 9-20 (36)
118 2dar_A PDZ and LIM domain prot 26.9 19 0.00066 23.9 0.8 10 101-110 26-35 (90)
119 1rik_A E6APC1 peptide; E6-bind 26.5 19 0.00065 17.3 0.6 11 115-125 3-14 (29)
120 2elp_A Zinc finger protein 406 26.4 25 0.00086 18.2 1.1 12 114-125 9-21 (37)
121 1a7i_A QCRP2 (LIM1); LIM domai 26.0 17 0.00059 23.5 0.4 26 101-126 35-60 (81)
122 2ee8_A Protein ODD-skipped-rel 25.9 66 0.0022 20.7 3.4 27 99-125 16-57 (106)
123 1x63_A Skeletal muscle LIM-pro 25.9 19 0.00065 23.2 0.6 27 101-127 44-70 (82)
124 1zbd_B Rabphilin-3A; G protein 25.8 30 0.001 25.7 1.8 28 99-126 54-85 (134)
125 2d8y_A Eplin protein; LIM doma 25.7 19 0.00065 23.9 0.6 26 101-126 43-68 (91)
126 1x5w_A Zinc finger protein 64, 25.7 37 0.0013 20.4 1.9 12 99-110 8-19 (70)
127 2lvt_A Zinc finger and BTB dom 31.6 15 0.0005 17.9 0.0 13 114-126 2-15 (29)
128 2ayj_A 50S ribosomal protein L 25.6 19 0.00064 23.5 0.5 24 99-122 18-42 (56)
129 2elm_A Zinc finger protein 406 25.4 22 0.00077 18.7 0.8 12 114-125 9-21 (37)
130 2lv2_A Insulinoma-associated p 25.3 46 0.0016 22.2 2.5 27 99-125 27-68 (85)
131 3l11_A E3 ubiquitin-protein li 25.2 25 0.00085 24.2 1.2 39 100-139 15-57 (115)
132 2csy_A Zinc finger protein 183 25.2 54 0.0019 20.9 2.8 26 100-126 15-40 (81)
133 1wge_A Hypothetical protein 26 25.1 19 0.00066 25.0 0.5 13 112-124 28-40 (83)
134 2elv_A Zinc finger protein 406 25.0 24 0.00082 18.2 0.8 11 114-124 9-20 (36)
135 2djb_A Polycomb group ring fin 24.9 49 0.0017 20.7 2.5 26 100-126 15-41 (72)
136 1vq8_Z 50S ribosomal protein L 24.9 17 0.00057 25.2 0.2 32 99-130 26-62 (83)
137 2elr_A Zinc finger protein 406 24.7 25 0.00084 18.0 0.9 9 115-123 10-19 (36)
138 1fv5_A First zinc finger of U- 24.6 23 0.00078 20.1 0.7 15 112-126 6-21 (36)
139 2els_A Zinc finger protein 406 23.7 25 0.00085 18.1 0.7 11 114-124 9-20 (36)
140 2yur_A Retinoblastoma-binding 23.6 59 0.002 20.5 2.7 27 99-126 14-41 (74)
141 3pfq_A PKC-B, PKC-beta, protei 23.6 52 0.0018 29.7 3.3 42 99-140 112-157 (674)
142 2egq_A FHL1 protein; LIM domai 22.7 23 0.00078 22.5 0.5 27 101-127 47-73 (77)
143 2ytb_A Zinc finger protein 32; 22.7 29 0.00098 18.5 0.9 12 114-125 11-23 (42)
144 2lvr_A Zinc finger and BTB dom 28.4 18 0.00061 17.5 0.0 13 114-126 3-16 (30)
145 2kfq_A FP1; protein, de novo p 22.5 19 0.00065 18.4 0.1 12 115-126 3-15 (32)
146 1wil_A KIAA1045 protein; ring 22.2 54 0.0019 23.2 2.4 25 99-123 14-39 (89)
147 1twf_L ABC10-alpha, DNA-direct 22.1 25 0.00087 23.5 0.7 24 98-121 26-53 (70)
148 2yqq_A Zinc finger HIT domain- 22.0 51 0.0017 21.2 2.1 24 100-126 12-36 (56)
149 2epv_A Zinc finger protein 268 21.7 34 0.0012 18.6 1.1 11 114-124 12-23 (44)
150 2epc_A Zinc finger protein 32; 21.7 34 0.0012 18.1 1.1 11 114-124 11-22 (42)
151 1x3h_A Leupaxin; paxillin fami 21.6 27 0.00094 22.3 0.7 27 101-127 42-68 (80)
152 2eon_A ZFP-95, zinc finger pro 21.5 35 0.0012 18.8 1.1 10 115-124 13-23 (46)
153 2epx_A Zinc finger protein 28 21.4 36 0.0012 18.6 1.1 11 114-124 12-23 (47)
154 2yte_A Zinc finger protein 473 21.4 34 0.0012 18.2 1.0 11 114-124 10-21 (42)
155 1hae_A Heregulin-alpha; growth 21.3 36 0.0012 21.3 1.3 31 112-142 29-59 (63)
156 2ckl_B Ubiquitin ligase protei 21.2 31 0.001 25.4 1.0 27 99-126 53-80 (165)
157 1iml_A CRIP, cysteine rich int 20.8 39 0.0013 21.4 1.4 25 101-125 28-52 (76)
158 2y43_A E3 ubiquitin-protein li 20.7 31 0.0011 23.1 0.9 40 100-140 22-65 (99)
159 3cxl_A N-chimerin; SH2, RHO-GA 20.4 41 0.0014 29.2 1.8 42 99-140 219-264 (463)
160 2cur_A Skeletal muscle LIM-pro 20.4 32 0.0011 21.4 0.8 26 101-126 32-57 (69)
161 2eoj_A Zinc finger protein 268 20.3 31 0.0011 18.6 0.7 12 114-125 12-24 (44)
162 3fl2_A E3 ubiquitin-protein li 20.2 34 0.0012 23.9 1.0 26 100-126 52-77 (124)
163 2enh_A Zinc finger protein 28 20.2 37 0.0013 18.6 1.0 10 115-124 13-23 (46)
164 3iuf_A Zinc finger protein UBI 20.1 33 0.0011 19.5 0.8 13 113-125 6-19 (48)
165 1njq_A Superman protein; zinc- 20.1 34 0.0012 18.0 0.8 11 114-124 6-17 (39)
166 1bor_A Transcription factor PM 20.1 75 0.0026 19.1 2.6 38 100-138 6-43 (56)
167 2ep4_A Ring finger protein 24; 20.1 84 0.0029 19.5 2.9 27 100-126 15-43 (74)
No 1
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.96 E-value=1.4e-30 Score=187.64 Aligned_cols=62 Identities=37% Similarity=0.944 Sum_probs=58.9
Q ss_pred CCcccccccccccccccc-ceeeecCcccccCccCCCCCCCcccchHhhHHHHHHhCCccccc
Q 031253 96 GSSVKRRCEICNKKVGLI-EFKCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRAD 157 (163)
Q Consensus 96 ~~~~~~rC~~C~kk~gl~-gf~CrCg~~fC~~HR~~~~H~C~~dyk~~~r~~l~k~np~v~~~ 157 (163)
+++.++||+.|+|||||+ +|+||||++||+.|||+|+|+|+||||++||++|+|+||+|+++
T Consensus 21 ~k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~ 83 (85)
T 1wff_A 21 KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS 83 (85)
T ss_dssp CCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred CcccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence 456689999999999995 99999999999999999999999999999999999999999986
No 2
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.93 E-value=1.5e-27 Score=163.70 Aligned_cols=53 Identities=47% Similarity=1.058 Sum_probs=50.0
Q ss_pred CCccccccccccccccccceeeecCcccccCccCCCCCCCcccchHhhHHHHH
Q 031253 96 GSSVKRRCEICNKKVGLIEFKCRCGHLYCGTHRYPKEHACTFDFKKFDREMLV 148 (163)
Q Consensus 96 ~~~~~~rC~~C~kk~gl~gf~CrCg~~fC~~HR~~~~H~C~~dyk~~~r~~l~ 148 (163)
++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus 11 ~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~ 63 (64)
T 1wfh_A 11 PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63 (64)
T ss_dssp CCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred CCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence 45668999999999999999999999999999999999999999999999875
No 3
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.92 E-value=4.2e-27 Score=161.58 Aligned_cols=53 Identities=47% Similarity=1.084 Sum_probs=49.5
Q ss_pred CCCccccccccccccccccceeeecCcccccCccCCCCCCCcccchHhhHHHH
Q 031253 95 AGSSVKRRCEICNKKVGLIEFKCRCGHLYCGTHRYPKEHACTFDFKKFDREML 147 (163)
Q Consensus 95 ~~~~~~~rC~~C~kk~gl~gf~CrCg~~fC~~HR~~~~H~C~~dyk~~~r~~l 147 (163)
+++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus 10 ~~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~ 62 (64)
T 1wg2_A 10 RPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS 62 (64)
T ss_dssp CCSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred CCCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence 34456899999999999999999999999999999999999999999999877
No 4
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.92 E-value=4.8e-26 Score=160.18 Aligned_cols=52 Identities=46% Similarity=1.037 Sum_probs=48.1
Q ss_pred CCCccccccccccccccccceeeecCcccccCccCCCCCCCcccchHhhHHH
Q 031253 95 AGSSVKRRCEICNKKVGLIEFKCRCGHLYCGTHRYPKEHACTFDFKKFDREM 146 (163)
Q Consensus 95 ~~~~~~~rC~~C~kk~gl~gf~CrCg~~fC~~HR~~~~H~C~~dyk~~~r~~ 146 (163)
+.++.+|||++|+|||||+||.||||++||+.|||+|+|+|+||||++||++
T Consensus 20 ~~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~ 71 (74)
T 1wfl_A 20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP 71 (74)
T ss_dssp CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred cCCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence 3445689999999999999999999999999999999999999999999874
No 5
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.91 E-value=4.5e-26 Score=160.31 Aligned_cols=54 Identities=52% Similarity=1.064 Sum_probs=50.2
Q ss_pred CCCCccccccccccccccccceeeecCcccccCccCCCCCCCcccchHhhHHHH
Q 031253 94 AAGSSVKRRCEICNKKVGLIEFKCRCGHLYCGTHRYPKEHACTFDFKKFDREML 147 (163)
Q Consensus 94 ~~~~~~~~rC~~C~kk~gl~gf~CrCg~~fC~~HR~~~~H~C~~dyk~~~r~~l 147 (163)
.++++.++||+.|+|||||++|+||||++||+.|||+|+|+|+||||++||++|
T Consensus 19 ~~~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~ 72 (74)
T 1wfp_A 19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS 72 (74)
T ss_dssp CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred ccCcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence 344567899999999999999999999999999999999999999999999876
No 6
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=7.3e-26 Score=156.71 Aligned_cols=53 Identities=36% Similarity=0.782 Sum_probs=48.6
Q ss_pred CCCccccccccccccccccc---eeeecCcccccCccCCCCCCCcccchHhhHHHH
Q 031253 95 AGSSVKRRCEICNKKVGLIE---FKCRCGHLYCGTHRYPKEHACTFDFKKFDREML 147 (163)
Q Consensus 95 ~~~~~~~rC~~C~kk~gl~g---f~CrCg~~fC~~HR~~~~H~C~~dyk~~~r~~l 147 (163)
++++.++||+.|+|||||++ |+||||++||+.|||||+|+|+||||++||+.|
T Consensus 10 ~~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~ 65 (67)
T 1x4w_A 10 SKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS 65 (67)
T ss_dssp CSCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred cCCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence 34567899999999999984 999999999999999999999999999999865
No 7
>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A
Probab=99.79 E-value=6.5e-20 Score=124.97 Aligned_cols=38 Identities=34% Similarity=0.849 Sum_probs=33.4
Q ss_pred CCcccccccCCCCCCcccCCCchhhhhhHHHHHHHHhh
Q 031253 3 RNNVTMCIKGCGFYGSKENKNMCSKCYDDYLKAELIAK 40 (163)
Q Consensus 3 ~~~p~LCaNgCGFFGS~aT~nmCSKCYrd~~~~~~~~~ 40 (163)
+++|+||+|||||||||+|+|||||||||++++++...
T Consensus 10 ~~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~~ 47 (62)
T 2kzy_A 10 TPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSG 47 (62)
T ss_dssp CSCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHHC
T ss_pred CCcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhccc
Confidence 45789999999999999999999999999987766543
No 8
>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B
Probab=99.74 E-value=7e-19 Score=123.25 Aligned_cols=35 Identities=31% Similarity=0.829 Sum_probs=27.4
Q ss_pred CCcccccccCCCCCCcccCCCchhhhhhHHHHHHH
Q 031253 3 RNNVTMCIKGCGFYGSKENKNMCSKCYDDYLKAEL 37 (163)
Q Consensus 3 ~~~p~LCaNgCGFFGS~aT~nmCSKCYrd~~~~~~ 37 (163)
+++|+||+|||||||||+|+|||||||||++.++.
T Consensus 13 pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~~ 47 (74)
T 2c7n_A 13 DQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKAR 47 (74)
T ss_dssp -----CCTTCSSSCCCGGGTTCCHHHHHHHHHHHH
T ss_pred CCcchhHHhCCCCCCChhhcCccHHHHHHHHHHHH
Confidence 46788999999999999999999999999875543
No 9
>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C
Probab=99.68 E-value=1.1e-17 Score=108.72 Aligned_cols=30 Identities=33% Similarity=0.971 Sum_probs=27.4
Q ss_pred cccccc-cCCCCCCcccCCCchhhhhhHHHH
Q 031253 5 NVTMCI-KGCGFYGSKENKNMCSKCYDDYLK 34 (163)
Q Consensus 5 ~p~LCa-NgCGFFGS~aT~nmCSKCYrd~~~ 34 (163)
+..||+ |||||||||+|+|||||||||++.
T Consensus 17 gq~lC~~ngCGFfG~p~t~n~CSkCyre~~e 47 (49)
T 3oj3_I 17 GTSKCRKAGCVYFGTPENKGFCTLCFIEYRE 47 (49)
T ss_dssp CCCBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred CccccccCCCCCccCcccCCcchHHHHHHHH
Confidence 347999 999999999999999999999865
No 10
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.32 E-value=2.9e-13 Score=97.48 Aligned_cols=59 Identities=19% Similarity=0.396 Sum_probs=48.7
Q ss_pred CCcccccccc--ccccccccceeee-cCcccccCccCCCCCCCcccchHhhHHHHHHhCCcccccccccCC
Q 031253 96 GSSVKRRCEI--CNKKVGLIEFKCR-CGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 163 (163)
Q Consensus 96 ~~~~~~rC~~--C~kk~gl~gf~Cr-Cg~~fC~~HR~~~~H~C~~dyk~~~r~~l~k~np~v~~~k~~~KI 163 (163)
.+..++||.. |+++ +|++|.|+ |+.+||..|||++.|+|+.. .+.+.++...+.++. +|
T Consensus 21 ~~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~-~~ 82 (86)
T 1wfe_A 21 DEHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVR-SG 82 (86)
T ss_dssp SCSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSS-CS
T ss_pred cCCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHH-HH
Confidence 3456799999 9998 88999999 99999999999999999974 336677777766666 54
No 11
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=5.9e-13 Score=90.95 Aligned_cols=40 Identities=28% Similarity=0.883 Sum_probs=37.0
Q ss_pred CCcccccccc--ccccccccceeee-cCcccccCccCCCCCCCc
Q 031253 96 GSSVKRRCEI--CNKKVGLIEFKCR-CGHLYCGTHRYPKEHACT 136 (163)
Q Consensus 96 ~~~~~~rC~~--C~kk~gl~gf~Cr-Cg~~fC~~HR~~~~H~C~ 136 (163)
++...+||.. |+++ +|++|.|+ |+.+||..|||+|.|+|.
T Consensus 8 ~k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~ 50 (63)
T 1x4v_A 8 RKIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCS 50 (63)
T ss_dssp CCTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCC
T ss_pred CcccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCC
Confidence 3456899999 9998 99999999 999999999999999997
No 12
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.21 E-value=2.8e-12 Score=90.32 Aligned_cols=41 Identities=24% Similarity=0.809 Sum_probs=38.6
Q ss_pred ccccccc--ccccccccceeee-cCcccccCccCCCCCCCcccch
Q 031253 99 VKRRCEI--CNKKVGLIEFKCR-CGHLYCGTHRYPKEHACTFDFK 140 (163)
Q Consensus 99 ~~~rC~~--C~kk~gl~gf~Cr-Cg~~fC~~HR~~~~H~C~~dyk 140 (163)
..+||.. |+++ ++++|+|+ |+.+||..|||++.|+|+++++
T Consensus 13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~ 56 (75)
T 1wys_A 13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNV 56 (75)
T ss_dssp CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSS
T ss_pred cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCcc
Confidence 4689998 9998 89999999 9999999999999999999986
No 13
>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=97.96 E-value=4.7e-06 Score=53.42 Aligned_cols=31 Identities=35% Similarity=0.984 Sum_probs=27.1
Q ss_pred CCcccccc-cCCCCCCcccCCCchhhhhhHHH
Q 031253 3 RNNVTMCI-KGCGFYGSKENKNMCSKCYDDYL 33 (163)
Q Consensus 3 ~~~p~LCa-NgCGFFGS~aT~nmCSKCYrd~~ 33 (163)
..+...|. .||-|||+|.+.++|..||.++.
T Consensus 12 ~~gt~kCRk~GC~fFGTpen~GFCTlCf~eyr 43 (48)
T 2eqe_A 12 RTGTSKCRKAGCVYFGTPENKGFCTLCFIEYS 43 (48)
T ss_dssp SCCSSBCSSTTCCSBCCTTTTTCCHHHHHHHH
T ss_pred ccccchhhhcCCCcccCcccCceeeeehhhhh
Confidence 34556897 99999999999999999999984
No 14
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=92.80 E-value=0.041 Score=37.17 Aligned_cols=27 Identities=44% Similarity=1.191 Sum_probs=23.9
Q ss_pred ccccccccccccc--ceeee-cCcccccCc
Q 031253 101 RRCEICNKKVGLI--EFKCR-CGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~H 127 (163)
..|..|+++.+++ -..|| ||.+||+.+
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~C 41 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEH 41 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccc
Confidence 4899999999985 48999 999999985
No 15
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=92.07 E-value=0.093 Score=36.89 Aligned_cols=29 Identities=31% Similarity=0.917 Sum_probs=24.8
Q ss_pred cccccccccccccccc--eeee-cCcccccCc
Q 031253 99 VKRRCEICNKKVGLIE--FKCR-CGHLYCGTH 127 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~g--f~Cr-Cg~~fC~~H 127 (163)
....|..|+++.+++. ..|| ||.+||+.+
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 39 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC 39 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence 3568999999999854 7999 999999974
No 16
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=91.69 E-value=0.085 Score=36.35 Aligned_cols=28 Identities=36% Similarity=1.086 Sum_probs=24.1
Q ss_pred cccccccccccccc--ceeee-cCcccccCc
Q 031253 100 KRRCEICNKKVGLI--EFKCR-CGHLYCGTH 127 (163)
Q Consensus 100 ~~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~H 127 (163)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 49 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC 49 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence 45899999999985 47999 999999973
No 17
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=91.46 E-value=0.07 Score=39.75 Aligned_cols=28 Identities=29% Similarity=0.945 Sum_probs=24.1
Q ss_pred cccccccccccccc--ceeee-cCcccccCc
Q 031253 100 KRRCEICNKKVGLI--EFKCR-CGHLYCGTH 127 (163)
Q Consensus 100 ~~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~H 127 (163)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C 99 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC 99 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence 46899999999985 37999 999999874
No 18
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.08 E-value=0.13 Score=35.58 Aligned_cols=28 Identities=21% Similarity=0.740 Sum_probs=24.3
Q ss_pred ccccccccccccccc--eeee-cCcccccCc
Q 031253 100 KRRCEICNKKVGLIE--FKCR-CGHLYCGTH 127 (163)
Q Consensus 100 ~~rC~~C~kk~gl~g--f~Cr-Cg~~fC~~H 127 (163)
...|..|.++.+++. -.|| ||.+||+..
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 44 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC 44 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence 468999999999854 7999 999999974
No 19
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=90.90 E-value=0.12 Score=35.78 Aligned_cols=28 Identities=29% Similarity=0.739 Sum_probs=24.3
Q ss_pred cccccccccccccc--ceeee-cCcccccCc
Q 031253 100 KRRCEICNKKVGLI--EFKCR-CGHLYCGTH 127 (163)
Q Consensus 100 ~~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~H 127 (163)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 51 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC 51 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence 56899999999985 48999 999999873
No 20
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=90.33 E-value=0.1 Score=41.59 Aligned_cols=28 Identities=32% Similarity=0.995 Sum_probs=24.3
Q ss_pred cccccccccccccc--ceeee-cCcccccCc
Q 031253 100 KRRCEICNKKVGLI--EFKCR-CGHLYCGTH 127 (163)
Q Consensus 100 ~~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~H 127 (163)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C 191 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC 191 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence 36999999999985 48999 999999974
No 21
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=89.96 E-value=0.13 Score=36.18 Aligned_cols=27 Identities=33% Similarity=0.994 Sum_probs=23.8
Q ss_pred cccccccccccccc--ceeee-cCcccccC
Q 031253 100 KRRCEICNKKVGLI--EFKCR-CGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~ 126 (163)
...|..|+++.+++ -..|| ||.+||+.
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~ 49 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGV 49 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGG
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCc
Confidence 46899999999985 58999 99999987
No 22
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=89.68 E-value=0.2 Score=40.42 Aligned_cols=28 Identities=32% Similarity=1.124 Sum_probs=24.3
Q ss_pred cccccccccccccc--ceeee-cCcccccCc
Q 031253 100 KRRCEICNKKVGLI--EFKCR-CGHLYCGTH 127 (163)
Q Consensus 100 ~~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~H 127 (163)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C 194 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC 194 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence 46899999999985 58999 999999874
No 23
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=88.14 E-value=0.18 Score=37.62 Aligned_cols=41 Identities=17% Similarity=0.431 Sum_probs=29.1
Q ss_pred cccccccccccccc--ceeee-cCcccccC---ccCCCCCCCcccch
Q 031253 100 KRRCEICNKKVGLI--EFKCR-CGHLYCGT---HRYPKEHACTFDFK 140 (163)
Q Consensus 100 ~~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~---HR~~~~H~C~~dyk 140 (163)
...|..|+++.+++ --.|| ||.+||+. |+.+..--|..=|.
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~ 65 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 65 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence 36999999998884 47999 99999987 56666666766554
No 24
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=85.75 E-value=0.38 Score=40.86 Aligned_cols=40 Identities=15% Similarity=0.324 Sum_probs=28.2
Q ss_pred cccccccccccc-cc--cceeee-cCcccccC-ccCCCCCCCcccch
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHLYCGT-HRYPKEHACTFDFK 140 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~fC~~-HR~~~~H~C~~dyk 140 (163)
.+..|..|++.+ |+ .|++|| ||.++|.. |..-. . |.-+.-
T Consensus 356 ~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~-C~~~~~ 400 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-P-CGRHGQ 400 (406)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-C-C-----
T ss_pred CCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-C-CCCCch
Confidence 578999999988 66 799999 99999988 33333 3 977654
No 25
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=84.89 E-value=0.31 Score=32.08 Aligned_cols=23 Identities=30% Similarity=0.863 Sum_probs=19.4
Q ss_pred cccccccccccccc--cceeee-cCc
Q 031253 99 VKRRCEICNKKVGL--IEFKCR-CGH 121 (163)
Q Consensus 99 ~~~rC~~C~kk~gl--~gf~Cr-Cg~ 121 (163)
.+..|..|++++++ +|++|+ |+.
T Consensus 18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~ 43 (61)
T 4b6d_A 18 KPESCVPCGKRIKFGKLSLKCRDCRV 43 (61)
T ss_dssp SCEECTTTCCEECTTCEEEEESSSSC
T ss_pred CCcccccccCEEEEeeEeeECCCCCC
Confidence 46799999999987 789999 754
No 26
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=78.17 E-value=0.43 Score=40.65 Aligned_cols=28 Identities=25% Similarity=0.693 Sum_probs=0.0
Q ss_pred cccccccccccccc--ceeee-cCcccccCc
Q 031253 100 KRRCEICNKKVGLI--EFKCR-CGHLYCGTH 127 (163)
Q Consensus 100 ~~rC~~C~kk~gl~--gf~Cr-Cg~~fC~~H 127 (163)
...|..|+++.+++ ...|| ||.+||+.+
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~C 405 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNC 405 (434)
T ss_dssp -------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhh
Confidence 56899999999884 58999 999998763
No 27
>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=73.95 E-value=2.1 Score=27.17 Aligned_cols=25 Identities=24% Similarity=0.744 Sum_probs=21.5
Q ss_pred cc-ccCCCCCCcccCCCchhhhhhHH
Q 031253 8 MC-IKGCGFYGSKENKNMCSKCYDDY 32 (163)
Q Consensus 8 LC-aNgCGFFGS~aT~nmCSKCYrd~ 32 (163)
-| .-||-||=|-.|+-+|-.||...
T Consensus 13 kCeTPnCpF~mSVnTQP~CHEC~err 38 (49)
T 2eqg_A 13 KCETPNCPFFMSVNTQPLCHECSERR 38 (49)
T ss_dssp BCSSTTCCSBCCTTTTTSCHHHHHHH
T ss_pred eecCCCCCeEEEecCccchHHHHHHH
Confidence 35 45899999999999999999754
No 28
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=71.03 E-value=2.1 Score=25.96 Aligned_cols=24 Identities=33% Similarity=0.798 Sum_probs=19.0
Q ss_pred cccccccccccc-cc--cceeee-cCcc
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHL 122 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~ 122 (163)
.+..|..|++.| || +|++|+ |+.+
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCe
Confidence 467899999988 44 799999 7654
No 29
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=70.86 E-value=1.6 Score=31.73 Aligned_cols=31 Identities=32% Similarity=0.806 Sum_probs=23.7
Q ss_pred ccccccccccccccceeee-cCcccccCccCCCCCC
Q 031253 100 KRRCEICNKKVGLIEFKCR-CGHLYCGTHRYPKEHA 134 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~Cr-Cg~~fC~~HR~~~~H~ 134 (163)
..+|..|...-++ +.|- ||.++|+ ||+..|.
T Consensus 24 ~~~C~~C~~~~~~--W~CL~CG~vgCg--r~~~~HA 55 (109)
T 3c5k_A 24 TQPCGDCGTIQEN--WVCLSCYQVYCG--RYINGHM 55 (109)
T ss_dssp TCCCTTTCCCSSE--EEETTTCCEEEC--TTTTCHH
T ss_pred CCcCccccCCCCe--eeeeecCccccC--CCcChHH
Confidence 5689999988665 6688 9999998 4555553
No 30
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=69.61 E-value=4.6 Score=26.07 Aligned_cols=25 Identities=36% Similarity=0.755 Sum_probs=19.7
Q ss_pred cccccccccccc-cc--cceeee-cCccc
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHLY 123 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~f 123 (163)
.+..|..|++.| || +|++|+ |+.+.
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~ 50 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMNV 50 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCEE
T ss_pred CCcCchhcChhheecCCcccccCCCCCcc
Confidence 467999999987 44 799999 76553
No 31
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=68.85 E-value=1.6 Score=27.51 Aligned_cols=22 Identities=27% Similarity=0.887 Sum_probs=18.0
Q ss_pred cccccccccccccceeee-cCccc
Q 031253 101 RRCEICNKKVGLIEFKCR-CGHLY 123 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~Cr-Cg~~f 123 (163)
..|..|+|.| ..|++|+ |++.+
T Consensus 15 t~C~~C~k~i-~~G~kC~~Ck~~c 37 (49)
T 1kbe_A 15 QVCNVCQKSM-IFGVKCKHCRLKC 37 (49)
T ss_dssp CCCSSSCCSS-CCEEEETTTTEEE
T ss_pred cCccccCcee-ECcCCCCCCCCcc
Confidence 5799999988 4899999 76654
No 32
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=67.25 E-value=2.5 Score=28.28 Aligned_cols=25 Identities=28% Similarity=0.741 Sum_probs=19.7
Q ss_pred ccccccccccccccc---cceeee-cCcc
Q 031253 98 SVKRRCEICNKKVGL---IEFKCR-CGHL 122 (163)
Q Consensus 98 ~~~~rC~~C~kk~gl---~gf~Cr-Cg~~ 122 (163)
....+|..|+..+.| .+.+|+ ||+-
T Consensus 19 ~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~R 47 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQAKEVIRCRECGHR 47 (63)
T ss_dssp CCCCBCSSSCCBCCCCSSSCCCCSSSCCC
T ss_pred CeEEECCCCCCeeecCCCCceECCCCCcE
Confidence 356899999999998 358897 7653
No 33
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=65.94 E-value=2.9 Score=27.99 Aligned_cols=25 Identities=20% Similarity=0.616 Sum_probs=21.0
Q ss_pred ccccccccccccccccceeee-cCcc
Q 031253 98 SVKRRCEICNKKVGLIEFKCR-CGHL 122 (163)
Q Consensus 98 ~~~~rC~~C~kk~gl~gf~Cr-Cg~~ 122 (163)
..+..|..|++.|.-.|++|+ ||.+
T Consensus 33 ~~pt~C~~C~~~l~~qG~kC~~C~~~ 58 (72)
T 2fnf_X 33 GGPGWCDLCGREVLRQALRCANCKFT 58 (72)
T ss_dssp SSCCBCTTTSSBCSSCCEECTTSSCE
T ss_pred CCCcchhhhhHHHHhCcCccCCCCCe
Confidence 457899999999966899999 7665
No 34
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.22 E-value=2.8 Score=28.49 Aligned_cols=25 Identities=36% Similarity=0.850 Sum_probs=20.2
Q ss_pred cccccccccccc-cc--cceeee-cCccc
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHLY 123 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~f 123 (163)
.+..|..|++.| || +|++|+ |+.++
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~C~~~~ 55 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQCNAAI 55 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETTTCCEE
T ss_pred CCcChhhcChhhccccccccccCCcCCee
Confidence 578999999988 44 799999 87653
No 35
>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=65.20 E-value=2.9 Score=26.15 Aligned_cols=24 Identities=17% Similarity=0.649 Sum_probs=21.3
Q ss_pred ccccCCCCCCcccCCCchhhhhhH
Q 031253 8 MCIKGCGFYGSKENKNMCSKCYDD 31 (163)
Q Consensus 8 LCaNgCGFFGS~aT~nmCSKCYrd 31 (163)
-++-+|.-|||.--+++|-.||.-
T Consensus 12 C~apgCdhygN~kc~GyCNeC~~f 35 (46)
T 2eqf_A 12 CRAPACDHFGNAKCNGYCNECFQF 35 (46)
T ss_dssp CSSTTCCSCCBGGGTBSCHHHHHH
T ss_pred ccCcccccccchhhhhhhHHHHhh
Confidence 348899999999999999999953
No 36
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=63.78 E-value=2.5 Score=25.90 Aligned_cols=24 Identities=33% Similarity=0.807 Sum_probs=19.6
Q ss_pred cccccccccccccccceeee-cCccc
Q 031253 99 VKRRCEICNKKVGLIEFKCR-CGHLY 123 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~gf~Cr-Cg~~f 123 (163)
.+..|..|++.|- .|++|+ |+...
T Consensus 13 ~pt~C~~C~~~l~-qG~~C~~C~~~~ 37 (52)
T 1faq_A 13 KLAFCDICQKFLL-NGFRCQTCGYKF 37 (52)
T ss_dssp SCEECTTSSSEEC-SEEECTTTTCCB
T ss_pred CCcCCCCcccccc-cCCEeCCCCCeE
Confidence 4679999999876 899999 76654
No 37
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=63.25 E-value=2.6 Score=27.04 Aligned_cols=25 Identities=20% Similarity=0.616 Sum_probs=20.6
Q ss_pred ccccccccccccccccceeee-cCcc
Q 031253 98 SVKRRCEICNKKVGLIEFKCR-CGHL 122 (163)
Q Consensus 98 ~~~~rC~~C~kk~gl~gf~Cr-Cg~~ 122 (163)
..+..|..|++.|.-+|++|+ |+.+
T Consensus 20 ~~pt~C~~C~~~i~kqg~kC~~C~~~ 45 (59)
T 1rfh_A 20 GGPGWCDLCGREVLRQALRCANCKFT 45 (59)
T ss_dssp SCCEECTTTCSEECSCCEECTTTSCE
T ss_pred CCCeEchhcchhhhhCccEeCCCCCe
Confidence 457899999999966899999 7654
No 38
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=61.39 E-value=3.6 Score=30.14 Aligned_cols=26 Identities=19% Similarity=0.508 Sum_probs=17.2
Q ss_pred cccccceeee-cCcccccCccCCCCCCCc
Q 031253 109 KVGLIEFKCR-CGHLYCGTHRYPKEHACT 136 (163)
Q Consensus 109 k~gl~gf~Cr-Cg~~fC~~HR~~~~H~C~ 136 (163)
+|-+..++|+ ||++|. -+......|+
T Consensus 62 ~L~v~p~~C~~CG~~F~--~~~~kPsrCP 88 (105)
T 2gmg_A 62 VLLIKPAQCRKCGFVFK--AEINIPSRCP 88 (105)
T ss_dssp EEEECCCBBTTTCCBCC--CCSSCCSSCS
T ss_pred EEEEECcChhhCcCeec--ccCCCCCCCc
Confidence 4566789999 999993 3444445554
No 39
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=61.35 E-value=4 Score=26.29 Aligned_cols=24 Identities=33% Similarity=0.798 Sum_probs=19.0
Q ss_pred cccccccccccc-cc--cceeee-cCcc
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHL 122 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~ 122 (163)
.+..|..|++-| || .|++|+ |+.+
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCcccccChhhhccCceeeECCCCCCe
Confidence 467999999986 44 799998 7654
No 40
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=60.28 E-value=4.4 Score=28.22 Aligned_cols=23 Identities=26% Similarity=0.949 Sum_probs=18.2
Q ss_pred ccccccccccc----cccceeee-cCcc
Q 031253 100 KRRCEICNKKV----GLIEFKCR-CGHL 122 (163)
Q Consensus 100 ~~rC~~C~kk~----gl~gf~Cr-Cg~~ 122 (163)
..+|..|+|.+ +|+||+|. |+.+
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~ 65 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAM 65 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCE
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChh
Confidence 46999999985 46899999 6554
No 41
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=59.78 E-value=2.9 Score=27.46 Aligned_cols=35 Identities=20% Similarity=0.579 Sum_probs=26.1
Q ss_pred ccccccccccccc-eeee-cCcccccC---ccCCCCCCCc
Q 031253 102 RCEICNKKVGLIE-FKCR-CGHLYCGT---HRYPKEHACT 136 (163)
Q Consensus 102 rC~~C~kk~gl~g-f~Cr-Cg~~fC~~---HR~~~~H~C~ 136 (163)
.|+.|.+.+.-.+ |.|. |+..||.. -.+-.-|.|.
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CP 56 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCP 56 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSS
T ss_pred cccccCcccCCCccEECCccCcCcccchhHHHHhhccCCc
Confidence 4999999986555 9998 99999964 3334466665
No 42
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=59.52 E-value=2.5 Score=27.67 Aligned_cols=13 Identities=38% Similarity=0.669 Sum_probs=11.1
Q ss_pred ccccccccccccc
Q 031253 100 KRRCEICNKKVGL 112 (163)
Q Consensus 100 ~~rC~~C~kk~gl 112 (163)
|.||++|+|-+|-
T Consensus 3 PVRCFTCGkvi~~ 15 (55)
T 1ef4_A 3 PVRCLSCGKPVSA 15 (55)
T ss_dssp SSSCSCTTSCCHH
T ss_pred CeecCCCCCChhH
Confidence 6799999998764
No 43
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=57.40 E-value=3.3 Score=28.29 Aligned_cols=14 Identities=50% Similarity=0.731 Sum_probs=11.8
Q ss_pred cccccccccccccc
Q 031253 99 VKRRCEICNKKVGL 112 (163)
Q Consensus 99 ~~~rC~~C~kk~gl 112 (163)
.|.||++|+|-+|-
T Consensus 3 iPVRCFTCGkvi~~ 16 (70)
T 1twf_J 3 VPVRCFSCGKVVGD 16 (70)
T ss_dssp CCSBCTTTCCBCTT
T ss_pred CCeecCCCCCChHH
Confidence 36799999998875
No 44
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=56.02 E-value=4.9 Score=35.99 Aligned_cols=38 Identities=16% Similarity=0.404 Sum_probs=28.1
Q ss_pred cccccccccccc-cc--cceeee-cCcccccC-ccCCCCCCCccc
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHLYCGT-HRYPKEHACTFD 138 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~fC~~-HR~~~~H~C~~d 138 (163)
.+..|..|++.+ || .|++|+ ||...|.. |.+- ..|...
T Consensus 528 ~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v--~~C~~~ 570 (587)
T 3ky9_A 528 ETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV--PPCGRH 570 (587)
T ss_dssp SCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS--CCC---
T ss_pred CCcccccccccccccccCCcCCCCCCCccchhhhhcC--CCCCCC
Confidence 578999999987 77 799999 99999888 3333 378544
No 45
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.04 E-value=13 Score=22.84 Aligned_cols=26 Identities=27% Similarity=0.630 Sum_probs=19.0
Q ss_pred ccccccccccccccceeeecCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
...|..|...+.- ...-.||++||..
T Consensus 20 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 45 (63)
T 2ysj_A 20 EVICPICLDILQK-PVTIDCGHNFCLK 45 (63)
T ss_dssp CCBCTTTCSBCSS-CEECTTSSEECHH
T ss_pred CCCCCcCCchhCC-eEEeCCCCcchHH
Confidence 5689999876554 3444899999974
No 46
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.88 E-value=8.2 Score=26.28 Aligned_cols=43 Identities=21% Similarity=0.434 Sum_probs=29.3
Q ss_pred cccccccccccc-cc--cceeee-cCcccccCccCCCCCCCcccchH
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHLYCGTHRYPKEHACTFDFKK 141 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~fC~~HR~~~~H~C~~dyk~ 141 (163)
.+..|..|++.| || +|++|+ |+.++=......=...|..++.+
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~e 73 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTE 73 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCCC
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchhh
Confidence 478999999987 44 799999 87664333333334578877763
No 47
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=53.46 E-value=6.1 Score=25.58 Aligned_cols=24 Identities=25% Similarity=0.706 Sum_probs=19.1
Q ss_pred cccccccccccc-cc--cceeee-cCcc
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHL 122 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~ 122 (163)
.+..|..|++.| || +|++|+ |+.+
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 50 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECGVK 50 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTCCE
T ss_pred CCcChhhcChhhcccCcceeEcCCCCCe
Confidence 467999999988 44 799999 7654
No 48
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=51.45 E-value=5.2 Score=26.81 Aligned_cols=25 Identities=32% Similarity=0.842 Sum_probs=19.8
Q ss_pred cccccccccccc-cc--cceeee-cCccc
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHLY 123 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~f 123 (163)
.+..|..|++-| || .|+.|+ |+.+.
T Consensus 33 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 61 (77)
T 2enn_A 33 QPTFCSVCHEFVWGLNKQGYQCRQCNAAI 61 (77)
T ss_dssp SCEECSSSCCEECCTTCCEEECSSSCCEE
T ss_pred CCcCccccChhhccccccccCcCCCCCcC
Confidence 578999999987 44 799999 76553
No 49
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=51.16 E-value=4.2 Score=27.50 Aligned_cols=13 Identities=23% Similarity=0.468 Sum_probs=10.9
Q ss_pred ccccccccccccc
Q 031253 100 KRRCEICNKKVGL 112 (163)
Q Consensus 100 ~~rC~~C~kk~gl 112 (163)
|-||++|+|-+|-
T Consensus 4 PVRCFTCGkvi~~ 16 (66)
T 4ayb_N 4 PIRCFTCGSLIAD 16 (66)
T ss_dssp CSBCTTTCCBCHH
T ss_pred CcccCCCcHhHHH
Confidence 6799999998764
No 50
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.89 E-value=11 Score=24.82 Aligned_cols=29 Identities=28% Similarity=0.518 Sum_probs=19.6
Q ss_pred cccccccccccccceee--ecCcccccCccC
Q 031253 101 RRCEICNKKVGLIEFKC--RCGHLYCGTHRY 129 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~C--rCg~~fC~~HR~ 129 (163)
-+|..|++.|....|.. +=|..||..|..
T Consensus 43 F~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~ 73 (82)
T 2co8_A 43 FRCHTCEATLWPGGYEQHPGDGHFYCLQHLP 73 (82)
T ss_dssp CBCSSSCCBCCTTSEECCTTTCCCEETTTCC
T ss_pred CEEcCCCCCcCCCceeEeCcCCEEEChHHHH
Confidence 46777778777766654 467778877654
No 51
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=49.24 E-value=9.9 Score=23.45 Aligned_cols=27 Identities=19% Similarity=0.696 Sum_probs=18.7
Q ss_pred cccccccccccccc--------------cceeee-cCccccc
Q 031253 99 VKRRCEICNKKVGL--------------IEFKCR-CGHLYCG 125 (163)
Q Consensus 99 ~~~rC~~C~kk~gl--------------~gf~Cr-Cg~~fC~ 125 (163)
.+..|..|+|.... ..|.|. ||..|-.
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~ 57 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR 57 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESC
T ss_pred CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCC
Confidence 46789999887542 347887 7776654
No 52
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.92 E-value=4.7 Score=26.84 Aligned_cols=24 Identities=17% Similarity=0.679 Sum_probs=19.0
Q ss_pred cccccccccccc-cc--cceeee-cCcc
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHL 122 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~ 122 (163)
.+..|..|++.| || +|++|+ |+.+
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~ 54 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKNCKTN 54 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESSSCCE
T ss_pred CCcCchhcChhhccccCCccccCCCCCc
Confidence 468999999987 33 799999 7655
No 53
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=48.34 E-value=9 Score=24.78 Aligned_cols=29 Identities=21% Similarity=0.598 Sum_probs=23.4
Q ss_pred ccccccccccccccc----ceeee---cCcccccCc
Q 031253 99 VKRRCEICNKKVGLI----EFKCR---CGHLYCGTH 127 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~----gf~Cr---Cg~~fC~~H 127 (163)
...+|..|+..|.+. -.+|+ |+..||..=
T Consensus 5 ~~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C 40 (60)
T 1wd2_A 5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 40 (60)
T ss_dssp CCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSS
T ss_pred cceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCc
Confidence 356899999888883 37998 999999874
No 54
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.41 E-value=17 Score=22.73 Aligned_cols=26 Identities=27% Similarity=0.630 Sum_probs=19.3
Q ss_pred ccccccccccccccceeeecCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
...|..|...+.- ...-.||++||..
T Consensus 20 ~~~C~IC~~~~~~-~~~~~CgH~fC~~ 45 (73)
T 2ysl_A 20 EVICPICLDILQK-PVTIDCGHNFCLK 45 (73)
T ss_dssp CCBCTTTCSBCSS-EEECTTCCEEEHH
T ss_pred CCEeccCCcccCC-eEEcCCCChhhHH
Confidence 5689999886554 3334899999975
No 55
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.90 E-value=16 Score=23.06 Aligned_cols=49 Identities=16% Similarity=0.350 Sum_probs=31.5
Q ss_pred cccccccccccccccceeeecCcccccC--cc-CCCCCCCcccchHhhHHHHH
Q 031253 99 VKRRCEICNKKVGLIEFKCRCGHLYCGT--HR-YPKEHACTFDFKKFDREMLV 148 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~gf~CrCg~~fC~~--HR-~~~~H~C~~dyk~~~r~~l~ 148 (163)
....|..|...+.- ...-.||++||.. .+ +.....|.+--+...++.|.
T Consensus 14 ~~~~C~IC~~~~~~-~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 65 (71)
T 2d8t_A 14 TVPECAICLQTCVH-PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLD 65 (71)
T ss_dssp SCCBCSSSSSBCSS-EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHHS
T ss_pred CCCCCccCCcccCC-CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhcc
Confidence 35689999876544 3444799999975 22 33445787766665555553
No 56
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=41.40 E-value=7.1 Score=24.40 Aligned_cols=27 Identities=22% Similarity=0.293 Sum_probs=17.3
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|....|.=+=|..||..|
T Consensus 40 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 66 (72)
T 3f6q_B 40 FVCAQCFQQFPEGLFYEFEGRKYCEHD 66 (72)
T ss_dssp SSCTTTCCCCGGGCCEEETTEEECHHH
T ss_pred CcccCCCCCCCCCCeEeECCeEeCHHH
Confidence 367777777766556555566666554
No 57
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=40.75 E-value=9.2 Score=24.05 Aligned_cols=27 Identities=22% Similarity=0.474 Sum_probs=19.0
Q ss_pred cccccccccccccc--------------cceeee-cCccccc
Q 031253 99 VKRRCEICNKKVGL--------------IEFKCR-CGHLYCG 125 (163)
Q Consensus 99 ~~~rC~~C~kk~gl--------------~gf~Cr-Cg~~fC~ 125 (163)
.|..|..|+|.... ..|.|. ||..|-.
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~ 44 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRD 44 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESS
T ss_pred CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCC
Confidence 35678888876543 358888 8888854
No 58
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=40.43 E-value=13 Score=23.83 Aligned_cols=28 Identities=14% Similarity=0.326 Sum_probs=22.2
Q ss_pred cccccccccccccceeeecCcccccCcc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTHR 128 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~HR 128 (163)
-+|..|++.|....|.=+=|..||..|-
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~cy 63 (76)
T 1x68_A 36 FNCGKCSVSLVGKGFLTQNKEIFCQKCG 63 (76)
T ss_dssp CBCTTTCCBCSSSCEEEETTEEEETTTT
T ss_pred CChhhCCCcCCCCceEeECCEEECHHHh
Confidence 4788889988776787788888998764
No 59
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.13 E-value=32 Score=21.72 Aligned_cols=26 Identities=27% Similarity=0.752 Sum_probs=19.0
Q ss_pred ccccccccccccccceeeecCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
...|..|...+.- ...-.||++||..
T Consensus 19 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 44 (85)
T 2ecv_A 19 EVTCPICLELLTQ-PLSLDCGHSFCQA 44 (85)
T ss_dssp CCCCTTTCSCCSS-CBCCSSSCCBCTT
T ss_pred CCCCCCCCcccCC-ceeCCCCCHHHHH
Confidence 4689999886543 3344799999975
No 60
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=39.80 E-value=11 Score=22.96 Aligned_cols=26 Identities=19% Similarity=0.526 Sum_probs=17.6
Q ss_pred cccccccccccc-----------cccceeee-cCcccc
Q 031253 99 VKRRCEICNKKV-----------GLIEFKCR-CGHLYC 124 (163)
Q Consensus 99 ~~~rC~~C~kk~-----------gl~gf~Cr-Cg~~fC 124 (163)
.+..|..|+|.. |-..|.|. ||..|-
T Consensus 13 k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVE 50 (62)
T ss_dssp SEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCE
T ss_pred CCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccc
Confidence 357888888742 22458887 887774
No 61
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=39.15 E-value=16 Score=23.40 Aligned_cols=30 Identities=27% Similarity=0.582 Sum_probs=22.0
Q ss_pred cccceeeecCcccccCccCCCCCCCcccch
Q 031253 111 GLIEFKCRCGHLYCGTHRYPKEHACTFDFK 140 (163)
Q Consensus 111 gl~gf~CrCg~~fC~~HR~~~~H~C~~dyk 140 (163)
|-.||+|.||...|---.--....|+-|-|
T Consensus 13 gevgytcdcgekiclygqscndgqcsgdpk 42 (57)
T 1e0f_I 13 GEVGYTCDCGEKICLYGQSCNDGQCSGDPK 42 (57)
T ss_dssp SSCSSCEECSSSEECTTCCBSSSCBCSCCC
T ss_pred CceeeeccCCceeeEecccccCCcccCCCC
Confidence 446889999998887666666677777654
No 62
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=38.98 E-value=14 Score=26.57 Aligned_cols=27 Identities=26% Similarity=0.744 Sum_probs=21.6
Q ss_pred cccccccccccccceeee-cCcccccCccCC
Q 031253 101 RRCEICNKKVGLIEFKCR-CGHLYCGTHRYP 130 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~Cr-Cg~~fC~~HR~~ 130 (163)
-+|..|+|... |.|. |...||..|...
T Consensus 59 c~C~~C~k~~~---~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 59 HQCDECSSAAV---SFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp GBCTTTCSBCC---EECSSSSCEECTTTCTT
T ss_pred CCCCcCCCCCC---cCcCCCCcchhhhccCC
Confidence 46778888754 8999 999999998753
No 63
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=38.37 E-value=9.9 Score=24.27 Aligned_cols=24 Identities=33% Similarity=0.508 Sum_probs=20.4
Q ss_pred cccccccccccccccceeee-cCcc
Q 031253 99 VKRRCEICNKKVGLIEFKCR-CGHL 122 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~gf~Cr-Cg~~ 122 (163)
....|..|+.+++.---.|| ||++
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSC
T ss_pred CCccCCCCCCcCCCCceecCCCCCc
Confidence 46789999999888778999 9987
No 64
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.21 E-value=8.9 Score=24.17 Aligned_cols=27 Identities=26% Similarity=0.613 Sum_probs=18.8
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~f~~~~g~~yC~~c 58 (70)
T 2d8x_A 32 FRCDLCQEVLADIGFVKNAGRHLCRPC 58 (70)
T ss_dssp SBCSSSCCBCSSSCCEEETTEEECHHH
T ss_pred CEeCCCCCcCCCCccEeECCeEECHHH
Confidence 477788888777666666667777654
No 65
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.36 E-value=32 Score=20.29 Aligned_cols=26 Identities=23% Similarity=0.701 Sum_probs=19.0
Q ss_pred ccccccccccccccceeeecCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
...|..|...+.. ...-.||++||..
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 40 (58)
T 2ecj_A 15 EASCSVCLEYLKE-PVIIECGHNFCKA 40 (58)
T ss_dssp CCBCSSSCCBCSS-CCCCSSCCCCCHH
T ss_pred CCCCccCCcccCc-cEeCCCCCccCHH
Confidence 4689999876654 3445799999974
No 66
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.34 E-value=13 Score=19.34 Aligned_cols=13 Identities=31% Similarity=0.577 Sum_probs=7.3
Q ss_pred cceeee-cCccccc
Q 031253 113 IEFKCR-CGHLYCG 125 (163)
Q Consensus 113 ~gf~Cr-Cg~~fC~ 125 (163)
..|.|. ||..|-.
T Consensus 8 k~~~C~~C~k~f~~ 21 (36)
T 2elq_A 8 KPFKCSLCEYATRS 21 (36)
T ss_dssp CSEECSSSSCEESC
T ss_pred CCccCCCCCchhCC
Confidence 356666 6665543
No 67
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=36.65 E-value=14 Score=26.31 Aligned_cols=21 Identities=43% Similarity=0.806 Sum_probs=17.7
Q ss_pred cceeeecCcccccCccCCCCC
Q 031253 113 IEFKCRCGHLYCGTHRYPKEH 133 (163)
Q Consensus 113 ~gf~CrCg~~fC~~HR~~~~H 133 (163)
.=|+|.|++..=+.+|||..|
T Consensus 47 RFFkC~C~~Rt~sl~r~P~~~ 67 (92)
T 2kwq_A 47 RFFKCPCGNRTISLDRLPKKH 67 (92)
T ss_dssp EEEECTTSCEEEESSSSCCSC
T ss_pred EEEECCCCCceeEeeeCCCCC
Confidence 358999999998899999854
No 68
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=36.33 E-value=11 Score=26.51 Aligned_cols=28 Identities=29% Similarity=0.950 Sum_probs=21.4
Q ss_pred ccccccccccccccc----cc-eeee-cCcccccC
Q 031253 98 SVKRRCEICNKKVGL----IE-FKCR-CGHLYCGT 126 (163)
Q Consensus 98 ~~~~rC~~C~kk~gl----~g-f~Cr-Cg~~fC~~ 126 (163)
..+..|..|+|. .+ .| .+|+ ||.+|=+-
T Consensus 33 ~~ky~CpfCGk~-~vkR~a~GIW~C~kCg~~~AGG 66 (83)
T 3j21_i 33 RQKHTCPVCGRK-AVKRISTGIWQCQKCGATFAGG 66 (83)
T ss_dssp HSCBCCSSSCSS-CEEEEETTEEEETTTCCEEECC
T ss_pred hcccCCCCCCCc-eeEecCcCeEEcCCCCCEEeCC
Confidence 357899999876 34 35 5999 99999765
No 69
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.13 E-value=31 Score=22.17 Aligned_cols=27 Identities=26% Similarity=0.516 Sum_probs=19.4
Q ss_pred ccccccccccccc---cceeeecCcccccC
Q 031253 100 KRRCEICNKKVGL---IEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl---~gf~CrCg~~fC~~ 126 (163)
...|..|...+.. ....-.||++||..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~ 44 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICRQ 44 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEHH
T ss_pred CCCCccCCccccccCCCeEECCCCChhhHH
Confidence 4679999877654 13445799999975
No 70
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=35.75 E-value=18 Score=20.75 Aligned_cols=11 Identities=18% Similarity=0.863 Sum_probs=6.7
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 29 ~~~C~~C~~~f~ 40 (57)
T 1bbo_A 29 PYHCTYCNFSFK 40 (57)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCchhc
Confidence 46776 666553
No 71
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=34.99 E-value=12 Score=26.74 Aligned_cols=29 Identities=31% Similarity=0.802 Sum_probs=21.9
Q ss_pred ccccccccccccccc----cc-eeee-cCcccccCc
Q 031253 98 SVKRRCEICNKKVGL----IE-FKCR-CGHLYCGTH 127 (163)
Q Consensus 98 ~~~~rC~~C~kk~gl----~g-f~Cr-Cg~~fC~~H 127 (163)
..+..|..|+|. .+ .| .+|+ ||.+|=+-=
T Consensus 34 ~~ky~CpfCgk~-~vkR~a~GIW~C~~Cg~~~AGGA 68 (92)
T 3iz5_m 34 HSKYFCEFCGKF-AVKRKAVGIWGCKDCGKVKAGGA 68 (92)
T ss_dssp HSCBCCTTTCSS-CBEEEETTEEECSSSCCEEECCS
T ss_pred hccccCcccCCC-eeEecCcceEEcCCCCCEEeCCc
Confidence 357899999876 44 45 5999 999997753
No 72
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=33.83 E-value=19 Score=20.62 Aligned_cols=25 Identities=28% Similarity=0.643 Sum_probs=14.1
Q ss_pred ccccccccccccc--------------cceeee-cCcccc
Q 031253 100 KRRCEICNKKVGL--------------IEFKCR-CGHLYC 124 (163)
Q Consensus 100 ~~rC~~C~kk~gl--------------~gf~Cr-Cg~~fC 124 (163)
+..|..|++.... ..|.|. ||..|-
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 43 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAA 43 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhC
Confidence 4567777765432 346776 666553
No 73
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.53 E-value=13 Score=23.46 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=15.9
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1x61_A 34 FVCSTCRAQLRGQHFYAVERRAYCEGC 60 (72)
T ss_dssp CBCSSSCCBCTTSCEEESSSCEEEHHH
T ss_pred CcccccCCcCCcCcCEeeCCeEECHHH
Confidence 466677777755555555555555443
No 74
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=33.26 E-value=12 Score=17.80 Aligned_cols=11 Identities=27% Similarity=0.978 Sum_probs=6.5
Q ss_pred eeee-cCccccc
Q 031253 115 FKCR-CGHLYCG 125 (163)
Q Consensus 115 f~Cr-Cg~~fC~ 125 (163)
|.|. ||..|-.
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 5565 6666654
No 75
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.24 E-value=13 Score=23.52 Aligned_cols=27 Identities=15% Similarity=0.292 Sum_probs=19.2
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~c 62 (72)
T 1x4l_A 36 FNCKKCSLSLVGRGFLTERDDILCPDC 62 (72)
T ss_dssp CBCSSSCCBCTTSCCEECSSSEECHHH
T ss_pred CEeccCCCcCCCCccEeECCEEEChhH
Confidence 477788888776667667777777654
No 76
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=32.93 E-value=12 Score=24.95 Aligned_cols=24 Identities=29% Similarity=0.576 Sum_probs=10.7
Q ss_pred ccccccccccccceeeecCccccc
Q 031253 102 RCEICNKKVGLIEFKCRCGHLYCG 125 (163)
Q Consensus 102 rC~~C~kk~gl~gf~CrCg~~fC~ 125 (163)
+|..|++.|....|.=+=|..||.
T Consensus 53 ~C~~C~~~L~~~~~~~~~g~~yC~ 76 (89)
T 1x64_A 53 VCADCNLNLKQKGYFFVEGELYCE 76 (89)
T ss_dssp CCSSSCCCTTTSCCEEETTEEECH
T ss_pred EecCCCCCCCCCCeEeECCEEECH
Confidence 444555554443343343444443
No 77
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=32.88 E-value=12 Score=23.21 Aligned_cols=27 Identities=33% Similarity=0.444 Sum_probs=17.7
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|....|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 58 (66)
T 1nyp_A 32 FVCAKCEKPFLGHRHYERKGLAYCETH 58 (66)
T ss_dssp CBCTTTCCBCSSSCCEEETTEEECHHH
T ss_pred CEECCCCCCCCCCceEeECCcEECHHH
Confidence 467778887766566666666666543
No 78
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.62 E-value=46 Score=20.36 Aligned_cols=27 Identities=26% Similarity=0.794 Sum_probs=17.5
Q ss_pred cccccccccccccc--------------cceeee-cCccccc
Q 031253 99 VKRRCEICNKKVGL--------------IEFKCR-CGHLYCG 125 (163)
Q Consensus 99 ~~~rC~~C~kk~gl--------------~gf~Cr-Cg~~fC~ 125 (163)
.+..|..|++.... ..|.|. ||..|-.
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 58 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQ 58 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESS
T ss_pred CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCC
Confidence 46788888876542 347777 6666643
No 79
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=31.60 E-value=13 Score=17.92 Aligned_cols=10 Identities=30% Similarity=1.085 Sum_probs=6.2
Q ss_pred eeee-cCcccc
Q 031253 115 FKCR-CGHLYC 124 (163)
Q Consensus 115 f~Cr-Cg~~fC 124 (163)
|.|. ||..|-
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 5666 666664
No 80
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=31.58 E-value=13 Score=17.89 Aligned_cols=12 Identities=25% Similarity=1.088 Sum_probs=7.2
Q ss_pred ceeee-cCccccc
Q 031253 114 EFKCR-CGHLYCG 125 (163)
Q Consensus 114 gf~Cr-Cg~~fC~ 125 (163)
.|.|. ||..|-.
T Consensus 3 ~~~C~~C~~~f~~ 15 (30)
T 2m0d_A 3 PYQCDYCGRSFSD 15 (30)
T ss_dssp CEECTTTCCEESC
T ss_pred CccCCCCCcccCC
Confidence 46666 6666643
No 81
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=31.46 E-value=22 Score=20.64 Aligned_cols=11 Identities=18% Similarity=0.920 Sum_probs=6.2
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 30 ~~~C~~C~~~f~ 41 (60)
T 2adr_A 30 PYPCGLCNRAFT 41 (60)
T ss_dssp SEECTTTCCEES
T ss_pred CccCCCCCCccC
Confidence 46666 555553
No 82
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=31.42 E-value=14 Score=17.81 Aligned_cols=11 Identities=27% Similarity=0.688 Sum_probs=6.6
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvh_A 3 PFSCSLCPQRSR 14 (27)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCcChhhC
Confidence 36666 666664
No 83
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.06 E-value=25 Score=24.23 Aligned_cols=31 Identities=35% Similarity=0.836 Sum_probs=25.2
Q ss_pred cccccccccccccc---cceeee-cCcccccCccC
Q 031253 99 VKRRCEICNKKVGL---IEFKCR-CGHLYCGTHRY 129 (163)
Q Consensus 99 ~~~rC~~C~kk~gl---~gf~Cr-Cg~~fC~~HR~ 129 (163)
...+|..|.+.+|+ +|..|+ |-+.-|..-|-
T Consensus 24 ~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv 58 (76)
T 2csz_A 24 SDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRI 58 (76)
T ss_dssp CCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEE
T ss_pred CccchhhhCccccccccCCCcCcccChhhcccccc
Confidence 46899999999999 578898 88777776553
No 84
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=36.97 E-value=10 Score=18.13 Aligned_cols=13 Identities=23% Similarity=0.945 Sum_probs=8.3
Q ss_pred ceeee-cCcccccC
Q 031253 114 EFKCR-CGHLYCGT 126 (163)
Q Consensus 114 gf~Cr-Cg~~fC~~ 126 (163)
.|.|. ||..|-..
T Consensus 2 p~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 2 PYVCERCGKRFVQS 15 (26)
Confidence 36676 77777654
No 85
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=30.77 E-value=14 Score=17.80 Aligned_cols=12 Identities=25% Similarity=0.924 Sum_probs=7.6
Q ss_pred ceeee-cCccccc
Q 031253 114 EFKCR-CGHLYCG 125 (163)
Q Consensus 114 gf~Cr-Cg~~fC~ 125 (163)
.|.|. ||..|-.
T Consensus 3 ~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 3 PYSCSVCGKRFSL 15 (28)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCCCcccCC
Confidence 46676 7776654
No 86
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=30.76 E-value=13 Score=25.72 Aligned_cols=41 Identities=22% Similarity=0.455 Sum_probs=26.0
Q ss_pred ccccccccccccc-c--c--ceeee-cCcccccCccC---CCCCCCcccc
Q 031253 99 VKRRCEICNKKVG-L--I--EFKCR-CGHLYCGTHRY---PKEHACTFDF 139 (163)
Q Consensus 99 ~~~rC~~C~kk~g-l--~--gf~Cr-Cg~~fC~~HR~---~~~H~C~~dy 139 (163)
.+..|..|++.|= | . ||+|+ |+.+.=..+.. .--..|..+|
T Consensus 34 ~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~~ 83 (84)
T 2row_A 34 FPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVYY 83 (84)
T ss_dssp SCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTTT
T ss_pred CCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcCC
Confidence 5678999998764 3 3 99999 76654333333 2334555554
No 87
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=30.67 E-value=17 Score=18.51 Aligned_cols=11 Identities=18% Similarity=0.733 Sum_probs=6.1
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 2elx_A 7 GYVCALCLKKFV 18 (35)
T ss_dssp SEECSSSCCEES
T ss_pred CeECCCCcchhC
Confidence 46665 555554
No 88
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=30.63 E-value=22 Score=24.80 Aligned_cols=38 Identities=18% Similarity=0.431 Sum_probs=23.5
Q ss_pred ccccccccccccccceeeecCcccccC--ccCCCCCCCccc
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT--HRYPKEHACTFD 138 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~--HR~~~~H~C~~d 138 (163)
.-.|..|..-+.-.-....||++||.. .++-+ ..|..-
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~-~~CP~C 61 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG-TGCPVC 61 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT-TBCSSS
T ss_pred CCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc-CCCcCC
Confidence 468999976554332333799999976 33333 456553
No 89
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.46 E-value=13 Score=23.65 Aligned_cols=25 Identities=24% Similarity=0.353 Sum_probs=14.0
Q ss_pred ccccccccccccceeeecCcccccC
Q 031253 102 RCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 102 rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
+|..|++.|....|.=+=|..||..
T Consensus 41 ~C~~C~~~L~~~~~~~~~g~~yC~~ 65 (77)
T 1g47_A 41 VCAQCFQQFPEGLFYEFEGRKYCEH 65 (77)
T ss_dssp CCTTTCCCCGGGCSEEETTEEECHH
T ss_pred eECCCCCCCCCCCeEeECCeEeCHH
Confidence 5556666665555555555555544
No 90
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=30.41 E-value=14 Score=17.64 Aligned_cols=12 Identities=42% Similarity=1.151 Sum_probs=7.1
Q ss_pred ceeee-cCccccc
Q 031253 114 EFKCR-CGHLYCG 125 (163)
Q Consensus 114 gf~Cr-Cg~~fC~ 125 (163)
.|.|. ||..|-.
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 2m0f_A 2 PLKCRECGKQFTT 14 (29)
T ss_dssp CEECTTTSCEESC
T ss_pred CccCCCCCCccCC
Confidence 36666 6666643
No 91
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=30.31 E-value=55 Score=20.56 Aligned_cols=26 Identities=23% Similarity=0.659 Sum_probs=18.8
Q ss_pred ccccccccccccccceeeecCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
...|..|...+.- ...-.||++||..
T Consensus 19 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 44 (85)
T 2ecw_A 19 EVTCPICLELLKE-PVSADCNHSFCRA 44 (85)
T ss_dssp TTSCTTTCSCCSS-CEECTTSCCBCHH
T ss_pred CCCCcCCChhhCc-ceeCCCCCHHHHH
Confidence 4689999876543 3455799999975
No 92
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.25 E-value=15 Score=24.29 Aligned_cols=27 Identities=22% Similarity=0.518 Sum_probs=18.0
Q ss_pred ccccccccccccc-c---------------cceeee-cCccccc
Q 031253 99 VKRRCEICNKKVG-L---------------IEFKCR-CGHLYCG 125 (163)
Q Consensus 99 ~~~rC~~C~kk~g-l---------------~gf~Cr-Cg~~fC~ 125 (163)
.+..|..|.|... . ..|.|. ||..|-.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~ 66 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKS 66 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSC
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCC
Confidence 4678888988766 1 237787 7666643
No 93
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.18 E-value=18 Score=24.20 Aligned_cols=11 Identities=18% Similarity=0.459 Sum_probs=7.9
Q ss_pred ccccccccccc
Q 031253 100 KRRCEICNKKV 110 (163)
Q Consensus 100 ~~rC~~C~kk~ 110 (163)
+..|..|+|..
T Consensus 34 ~~~C~~C~k~F 44 (96)
T 2ctd_A 34 SVSCPTCQAVG 44 (96)
T ss_dssp CEECTTTCSCE
T ss_pred CcCCCCCCCCc
Confidence 46777777766
No 94
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.91 E-value=18 Score=18.83 Aligned_cols=11 Identities=18% Similarity=0.921 Sum_probs=6.0
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (37)
T 2elo_A 9 SYSCPVCEKSFS 20 (37)
T ss_dssp CCEETTTTEECS
T ss_pred CcCCCCCCCccC
Confidence 45665 555553
No 95
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=29.91 E-value=17 Score=18.57 Aligned_cols=11 Identities=36% Similarity=0.948 Sum_probs=6.2
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 1srk_A 7 PFVCRICLSAFT 18 (35)
T ss_dssp CEECSSSCCEES
T ss_pred CeeCCCCCcccC
Confidence 45665 555554
No 96
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=29.63 E-value=14 Score=17.99 Aligned_cols=11 Identities=18% Similarity=0.594 Sum_probs=6.6
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvg_A 3 PYRCPLCRAGCP 14 (27)
T ss_dssp TEEETTTTEEES
T ss_pred CcCCCCCCcccC
Confidence 36666 666664
No 97
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=29.53 E-value=20 Score=18.63 Aligned_cols=10 Identities=30% Similarity=1.125 Sum_probs=4.7
Q ss_pred ceeee-cCccc
Q 031253 114 EFKCR-CGHLY 123 (163)
Q Consensus 114 gf~Cr-Cg~~f 123 (163)
.|.|. ||..|
T Consensus 11 ~~~C~~C~k~f 21 (37)
T 1p7a_A 11 PFQCPDCDRSF 21 (37)
T ss_dssp SBCCTTTCCCB
T ss_pred CccCCCCCccc
Confidence 34444 44444
No 98
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=29.48 E-value=12 Score=27.83 Aligned_cols=30 Identities=20% Similarity=0.597 Sum_probs=22.4
Q ss_pred ccccccccccc----cccccceeee-cCcccccCc
Q 031253 98 SVKRRCEICNK----KVGLIEFKCR-CGHLYCGTH 127 (163)
Q Consensus 98 ~~~~rC~~C~k----k~gl~gf~Cr-Cg~~fC~~H 127 (163)
..+..|..|++ +++.--..|+ ||.+|-+-=
T Consensus 58 ~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAGGA 92 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGS 92 (116)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEECCS
T ss_pred ccCCcCCCCCCceeEecCceeEECCCCCCEEECCC
Confidence 45789999998 3333337999 999998763
No 99
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=29.36 E-value=15 Score=17.65 Aligned_cols=11 Identities=18% Similarity=0.809 Sum_probs=6.5
Q ss_pred eeee-cCccccc
Q 031253 115 FKCR-CGHLYCG 125 (163)
Q Consensus 115 f~Cr-Cg~~fC~ 125 (163)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1klr_A 3 YQCQYCEFRSAD 14 (30)
T ss_dssp CCCSSSSCCCSC
T ss_pred ccCCCCCCccCC
Confidence 5666 6666643
No 100
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.23 E-value=16 Score=22.99 Aligned_cols=27 Identities=19% Similarity=0.439 Sum_probs=17.1
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1x4k_A 34 FICHRCQQPIGTKSFIPKDNQNFCVPC 60 (72)
T ss_dssp TCCSSSCCCCCSSSEEEETTEEEEHHH
T ss_pred CcccccCCccCCCccCccCCeEECHHH
Confidence 466777777766566656566666543
No 101
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=29.21 E-value=19 Score=23.89 Aligned_cols=39 Identities=26% Similarity=0.623 Sum_probs=24.5
Q ss_pred ccccccccccccc---cceeeecCcccccC--ccCC--CCCCCccc
Q 031253 100 KRRCEICNKKVGL---IEFKCRCGHLYCGT--HRYP--KEHACTFD 138 (163)
Q Consensus 100 ~~rC~~C~kk~gl---~gf~CrCg~~fC~~--HR~~--~~H~C~~d 138 (163)
...|..|--.+.+ .-+.|.||+.||.. +++. ....|..=
T Consensus 11 ~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~C 56 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPAC 56 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTT
T ss_pred CCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCC
Confidence 3468888887644 23458899999964 4443 23455543
No 102
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.11 E-value=26 Score=22.59 Aligned_cols=28 Identities=25% Similarity=0.574 Sum_probs=21.8
Q ss_pred cccccccccccccceeeecCcccccCcc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTHR 128 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~HR 128 (163)
-+|..|++.|....|.=+=|..||..|-
T Consensus 44 F~C~~C~~~L~~~~f~~~~~~~~C~~c~ 71 (82)
T 2ehe_A 44 FRCCRCQRSLADEPFTCQDSELLCNDCY 71 (82)
T ss_dssp SBCTTTCCBCSSCCEEEETTEEEETTTS
T ss_pred CeecCCCCccCCCccEeeCCEEECHHHH
Confidence 4788899988877787777888887764
No 103
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.05 E-value=36 Score=20.94 Aligned_cols=40 Identities=25% Similarity=0.546 Sum_probs=24.8
Q ss_pred ccccccccccccccceeeecCcccccC--ccC--CCCCCCcccch
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT--HRY--PKEHACTFDFK 140 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~--HR~--~~~H~C~~dyk 140 (163)
...|..|...+.- ...-.||++||.. .++ .....|...-+
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~ 58 (66)
T 2ecy_A 15 KYKCEKCHLVLCS-PKQTECGHRFCESCMAALLSSSSPKCTACQE 58 (66)
T ss_dssp CEECTTTCCEESS-CCCCSSSCCCCHHHHHHHHTTSSCCCTTTCC
T ss_pred CCCCCCCChHhcC-eeECCCCCHHHHHHHHHHHHhCcCCCCCCCc
Confidence 5689999876543 3345899999975 222 23345665443
No 104
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=28.82 E-value=15 Score=17.83 Aligned_cols=11 Identities=18% Similarity=0.912 Sum_probs=7.0
Q ss_pred eeee-cCccccc
Q 031253 115 FKCR-CGHLYCG 125 (163)
Q Consensus 115 f~Cr-Cg~~fC~ 125 (163)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 5666 7776754
No 105
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=28.55 E-value=16 Score=17.42 Aligned_cols=13 Identities=31% Similarity=0.761 Sum_probs=7.9
Q ss_pred ceeee-cCcccccC
Q 031253 114 EFKCR-CGHLYCGT 126 (163)
Q Consensus 114 gf~Cr-Cg~~fC~~ 126 (163)
.|.|. ||..|...
T Consensus 2 ~~~C~~C~~~f~~~ 15 (29)
T 2m0e_A 2 EHKCPHCDKKFNQV 15 (29)
T ss_dssp CCCCSSCCCCCCTT
T ss_pred CCcCCCCCcccCCH
Confidence 35666 77767543
No 106
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=28.54 E-value=14 Score=25.71 Aligned_cols=15 Identities=20% Similarity=0.698 Sum_probs=11.1
Q ss_pred ccceeeecCcccccC
Q 031253 112 LIEFKCRCGHLYCGT 126 (163)
Q Consensus 112 l~gf~CrCg~~fC~~ 126 (163)
..-+.||||..|--.
T Consensus 21 ~y~ypCrCGd~F~it 35 (83)
T 1yop_A 21 MFTYPCPCGDRFQIY 35 (83)
T ss_dssp EEEEEETTTEEEEEE
T ss_pred EEEEeCCCCCeEEEC
Confidence 346889999988543
No 107
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=28.46 E-value=22 Score=27.08 Aligned_cols=30 Identities=20% Similarity=0.526 Sum_probs=25.3
Q ss_pred cccccccccccccc---cceeee-cCcccccCcc
Q 031253 99 VKRRCEICNKKVGL---IEFKCR-CGHLYCGTHR 128 (163)
Q Consensus 99 ~~~rC~~C~kk~gl---~gf~Cr-Cg~~fC~~HR 128 (163)
....|..|.+.+|+ .|..|. |...+|..=+
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 46899999999998 478998 9999998644
No 108
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=28.10 E-value=29 Score=24.21 Aligned_cols=31 Identities=26% Similarity=0.643 Sum_probs=21.4
Q ss_pred ccccccccccccccceeee---cCcccccCccCCCCC
Q 031253 100 KRRCEICNKKVGLIEFKCR---CGHLYCGTHRYPKEH 133 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~Cr---Cg~~fC~~HR~~~~H 133 (163)
..+|..|.+. +-.-+.|- ||.++|+. |+..|
T Consensus 25 ~~~C~~C~~~-~~~lw~CL~~~Cg~vgCgr--~~~~H 58 (97)
T 2uzg_A 25 LGTCQDCKVQ-GPNLWACLENRCSYVGCGE--SQVDH 58 (97)
T ss_dssp TTCCSSSCCC-CSSCEEECCTTCCCEECCT--TTTCH
T ss_pred CCcCcCcCCC-CCCceeeecccCCCcccCC--CcChH
Confidence 4689999853 22236787 99999996 44433
No 109
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.10 E-value=22 Score=21.71 Aligned_cols=26 Identities=27% Similarity=0.673 Sum_probs=16.0
Q ss_pred cccccccccccccc--------------cceeee-cCcccc
Q 031253 99 VKRRCEICNKKVGL--------------IEFKCR-CGHLYC 124 (163)
Q Consensus 99 ~~~rC~~C~kk~gl--------------~gf~Cr-Cg~~fC 124 (163)
.+..|..|.+.... ..|.|. |+..|-
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~ 53 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS 53 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEES
T ss_pred CCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccC
Confidence 35678888775432 347776 665553
No 110
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.75 E-value=31 Score=20.97 Aligned_cols=27 Identities=30% Similarity=0.770 Sum_probs=18.5
Q ss_pred cccccccccccccc------ceeeecCcccccC
Q 031253 100 KRRCEICNKKVGLI------EFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~------gf~CrCg~~fC~~ 126 (163)
...|..|...+... ...-.||++||..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~ 47 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQ 47 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHH
T ss_pred CCCCcccCccccccccccCCeEeCCCCChhcHH
Confidence 56899998765432 1455699999864
No 111
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.51 E-value=17 Score=22.73 Aligned_cols=27 Identities=26% Similarity=0.458 Sum_probs=17.5
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1wyh_A 34 FLCSGCEQPLGSRSFVPDKGAHYCVPC 60 (72)
T ss_dssp CBCTTTCCBTTTSCEEEETTEEEEHHH
T ss_pred CeECCCCCcCCCCccCCcCCeEECHHH
Confidence 467777887776666656566666543
No 112
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=27.48 E-value=16 Score=25.84 Aligned_cols=13 Identities=23% Similarity=0.766 Sum_probs=10.2
Q ss_pred ccceeeecCcccc
Q 031253 112 LIEFKCRCGHLYC 124 (163)
Q Consensus 112 l~gf~CrCg~~fC 124 (163)
..-+.||||..|-
T Consensus 21 ~y~ypCrCGd~F~ 33 (89)
T 2jr7_A 21 TYFYPCPCGDNFS 33 (89)
T ss_dssp EEEEECTTSSEEE
T ss_pred EEEEcCCCCCEEE
Confidence 3468899999883
No 113
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.47 E-value=10 Score=24.64 Aligned_cols=25 Identities=16% Similarity=0.376 Sum_probs=13.4
Q ss_pred ccccccccccccceeeecCcccccC
Q 031253 102 RCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 102 rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
+|..|++.|....|.=+=|..||..
T Consensus 43 ~C~~C~~~L~~~~~~~~~g~~yC~~ 67 (79)
T 1x62_A 43 VCTDCGTNLKQKGHFFVEDQIYCEK 67 (79)
T ss_dssp SCSSSCCCHHHHCCEESSSCEECHH
T ss_pred eeCCCCCCCCCCCeEeECCEEECHH
Confidence 5556666655444554545555544
No 114
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=27.00 E-value=21 Score=24.32 Aligned_cols=30 Identities=27% Similarity=0.642 Sum_probs=21.5
Q ss_pred Cccccccccccc-cccc--cc-eeee-cCcccccC
Q 031253 97 SSVKRRCEICNK-KVGL--IE-FKCR-CGHLYCGT 126 (163)
Q Consensus 97 ~~~~~rC~~C~k-k~gl--~g-f~Cr-Cg~~fC~~ 126 (163)
+..+..|..|+| +|.- .| -.|+ |+.+|-+-
T Consensus 24 q~~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 24 HKKKYKCPVCGFPKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred cccCccCCCCCCceeEEEEeEEEECCCCCcEEECC
Confidence 356789999997 2222 23 6899 99998765
No 115
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.96 E-value=25 Score=22.43 Aligned_cols=25 Identities=24% Similarity=0.481 Sum_probs=17.3
Q ss_pred cccccccccccccceeeecCccccc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCG 125 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~ 125 (163)
-+|..|++.|....|.=+=|..||.
T Consensus 37 F~C~~C~~~L~~~~~~~~~g~~yC~ 61 (76)
T 2cu8_A 37 LKCERCSKTLTPGGHAEHDGKPFCH 61 (76)
T ss_dssp CBCSSSCCBCCTTSCEEETTEEECT
T ss_pred CCCCCCCCccCCCceEeECCEEecc
Confidence 4677888887765666666666765
No 116
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.95 E-value=19 Score=22.51 Aligned_cols=26 Identities=27% Similarity=0.533 Sum_probs=15.6
Q ss_pred cccccccccccccceeeecCcccccC
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
-+|..|++.|....|.=+=|..||..
T Consensus 32 F~C~~C~~~L~~~~~~~~~~~~yC~~ 57 (70)
T 2d8z_A 32 FVCTACRKQLSGQRFTARDDFAYCLN 57 (70)
T ss_dssp SBCSSSCCBCTTSCCEESSSSEECHH
T ss_pred CccCCCCCcCCcCceEeeCCeEECHH
Confidence 46777777776555555545555544
No 117
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.94 E-value=22 Score=18.16 Aligned_cols=11 Identities=27% Similarity=0.772 Sum_probs=5.8
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elt_A 9 PYKCPQCSYASA 20 (36)
T ss_dssp SEECSSSSCEES
T ss_pred CCCCCCCCcccC
Confidence 45555 555553
No 118
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.92 E-value=19 Score=23.87 Aligned_cols=10 Identities=30% Similarity=0.830 Sum_probs=5.5
Q ss_pred cccccccccc
Q 031253 101 RRCEICNKKV 110 (163)
Q Consensus 101 ~rC~~C~kk~ 110 (163)
.+|..|++.|
T Consensus 26 ~~C~~C~~~I 35 (90)
T 2dar_A 26 PMCAHCNQVI 35 (90)
T ss_dssp CBBSSSCCBC
T ss_pred CCCccCCCEe
Confidence 4555555544
No 119
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=26.54 E-value=19 Score=17.31 Aligned_cols=11 Identities=27% Similarity=0.869 Sum_probs=6.9
Q ss_pred eeee-cCccccc
Q 031253 115 FKCR-CGHLYCG 125 (163)
Q Consensus 115 f~Cr-Cg~~fC~ 125 (163)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 5666 7666654
No 120
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.38 E-value=25 Score=18.21 Aligned_cols=12 Identities=25% Similarity=0.833 Sum_probs=7.0
Q ss_pred ceeee-cCccccc
Q 031253 114 EFKCR-CGHLYCG 125 (163)
Q Consensus 114 gf~Cr-Cg~~fC~ 125 (163)
.|.|. ||..|-.
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elp_A 9 AMKCPYCDFYFMK 21 (37)
T ss_dssp CEECSSSSCEECS
T ss_pred CeECCCCChhhcc
Confidence 46666 6666643
No 121
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=25.98 E-value=17 Score=23.49 Aligned_cols=26 Identities=19% Similarity=0.520 Sum_probs=15.3
Q ss_pred cccccccccccccceeeecCcccccC
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
-+|..|++.|....|.=+=|..||..
T Consensus 35 F~C~~C~~~L~~~~~~~~~~~~yC~~ 60 (81)
T 1a7i_A 35 FLCMVCRKNLDSTTVAIHDAEVYCKS 60 (81)
T ss_dssp EECSSSCCEECSSCCEEETTEEECSH
T ss_pred CccCCCCCCCCCCCeEeeCCEEECHH
Confidence 35666777666555555555555544
No 122
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=25.88 E-value=66 Score=20.69 Aligned_cols=27 Identities=15% Similarity=0.551 Sum_probs=19.5
Q ss_pred cccccccccccccc--------------cceeee-cCccccc
Q 031253 99 VKRRCEICNKKVGL--------------IEFKCR-CGHLYCG 125 (163)
Q Consensus 99 ~~~rC~~C~kk~gl--------------~gf~Cr-Cg~~fC~ 125 (163)
.+..|..|++.... ..|.|. |+..|-.
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 57 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRR 57 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCC
Confidence 45788889886542 358888 8888854
No 123
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.87 E-value=19 Score=23.21 Aligned_cols=27 Identities=26% Similarity=0.517 Sum_probs=18.7
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|....|.=+=|..||..|
T Consensus 44 F~C~~C~~~L~~~~~~~~~~~~yC~~c 70 (82)
T 1x63_A 44 FTCSNCKQVIGTGSFFPKGEDFYCVTC 70 (82)
T ss_dssp CCCSSSCCCCTTSCEEEETTEEEEHHH
T ss_pred CchhhCCCccCCCccEeeCCEEECHHH
Confidence 467788888777666666666776554
No 124
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=25.84 E-value=30 Score=25.72 Aligned_cols=28 Identities=25% Similarity=0.768 Sum_probs=23.9
Q ss_pred cccccccccccccc---cceeee-cCcccccC
Q 031253 99 VKRRCEICNKKVGL---IEFKCR-CGHLYCGT 126 (163)
Q Consensus 99 ~~~rC~~C~kk~gl---~gf~Cr-Cg~~fC~~ 126 (163)
....|..|.+.+|+ .|..|. |...+|..
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~ 85 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTK 85 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETT
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccc
Confidence 45789999999997 467998 99999986
No 125
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.74 E-value=19 Score=23.93 Aligned_cols=26 Identities=35% Similarity=0.807 Sum_probs=15.1
Q ss_pred cccccccccccccceeeecCcccccC
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
-+|..|++.|....|.=+=|..||..
T Consensus 43 F~C~~C~~~L~~~~~~~~~g~~yC~~ 68 (91)
T 2d8y_A 43 FRCSYCNNKLSLGTYASLHGRIYCKP 68 (91)
T ss_dssp CBCTTTCCBCCTTTCCCSSSCCCCHH
T ss_pred CeeCCCCCCCCCCCcEeECCEEECHH
Confidence 35666777666544555555556554
No 126
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.73 E-value=37 Score=20.43 Aligned_cols=12 Identities=17% Similarity=0.553 Sum_probs=8.0
Q ss_pred cccccccccccc
Q 031253 99 VKRRCEICNKKV 110 (163)
Q Consensus 99 ~~~rC~~C~kk~ 110 (163)
.+..|..|.+..
T Consensus 8 ~~~~C~~C~k~f 19 (70)
T 1x5w_A 8 HPEKCSECSYSC 19 (70)
T ss_dssp CSEECSSSSCEE
T ss_pred CCeECCCCCccc
Confidence 356788887753
No 127
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=31.57 E-value=15 Score=17.92 Aligned_cols=13 Identities=23% Similarity=0.805 Sum_probs=8.3
Q ss_pred ceeee-cCcccccC
Q 031253 114 EFKCR-CGHLYCGT 126 (163)
Q Consensus 114 gf~Cr-Cg~~fC~~ 126 (163)
.|.|. ||..|-..
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2lvt_A 2 PCQCVMCGKAFTQA 15 (29)
Confidence 36676 77777554
No 128
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=25.59 E-value=19 Score=23.55 Aligned_cols=24 Identities=29% Similarity=0.657 Sum_probs=19.8
Q ss_pred cccccccccccccccceeee-cCcc
Q 031253 99 VKRRCEICNKKVGLIEFKCR-CGHL 122 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~gf~Cr-Cg~~ 122 (163)
...-|..|.-++....-.|| ||+.
T Consensus 18 ~k~ICrkC~ARnp~~A~~CRKCg~~ 42 (56)
T 2ayj_A 18 LKKVCRKCGALNPIRATKCRRCHST 42 (56)
T ss_dssp CCEEETTTCCEECTTCSSCTTTCCC
T ss_pred chhhhccccCcCCcccccccCCCCC
Confidence 45689999999999999999 8743
No 129
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.44 E-value=22 Score=18.72 Aligned_cols=12 Identities=17% Similarity=0.368 Sum_probs=7.6
Q ss_pred ceeee-cCccccc
Q 031253 114 EFKCR-CGHLYCG 125 (163)
Q Consensus 114 gf~Cr-Cg~~fC~ 125 (163)
.|+|. ||..|-.
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elm_A 9 LYYCSQCHYSSIT 21 (37)
T ss_dssp EEECSSSSCEEEC
T ss_pred CeECCCCCcccCC
Confidence 57776 7666654
No 130
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=25.29 E-value=46 Score=22.16 Aligned_cols=27 Identities=19% Similarity=0.607 Sum_probs=19.0
Q ss_pred cccccccccccccc--------------cceeee-cCccccc
Q 031253 99 VKRRCEICNKKVGL--------------IEFKCR-CGHLYCG 125 (163)
Q Consensus 99 ~~~rC~~C~kk~gl--------------~gf~Cr-Cg~~fC~ 125 (163)
..-.|..|+|.... ..|.|. ||..|-.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS 68 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC
Confidence 35689999886443 358887 8887754
No 131
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=25.20 E-value=25 Score=24.21 Aligned_cols=39 Identities=21% Similarity=0.456 Sum_probs=24.2
Q ss_pred ccccccccccccccceeeecCcccccC--ccCCC--CCCCcccc
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT--HRYPK--EHACTFDF 139 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~--HR~~~--~H~C~~dy 139 (163)
...|..|...+-- ...-.||++||.. .++-+ ...|.+--
T Consensus 15 ~~~C~iC~~~~~~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr 57 (115)
T 3l11_A 15 ECQCGICMEILVE-PVTLPCNHTLCKPCFQSTVEKASLCCPFCR 57 (115)
T ss_dssp HHBCTTTCSBCSS-CEECTTSCEECHHHHCCCCCTTTSBCTTTC
T ss_pred CCCCccCCcccCc-eeEcCCCCHHhHHHHHHHHhHCcCCCCCCC
Confidence 4689999876543 3333799999976 44433 23455443
No 132
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.20 E-value=54 Score=20.92 Aligned_cols=26 Identities=27% Similarity=0.710 Sum_probs=18.9
Q ss_pred ccccccccccccccceeeecCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
...|..|...+.- ...-.||++||..
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 40 (81)
T 2csy_A 15 PFRCFICRQAFQN-PVVTKCRHYFCES 40 (81)
T ss_dssp CSBCSSSCSBCCS-EEECTTSCEEEHH
T ss_pred CCCCcCCCchhcC-eeEccCCCHhHHH
Confidence 5689999876543 3455799999864
No 133
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=25.07 E-value=19 Score=24.99 Aligned_cols=13 Identities=23% Similarity=0.777 Sum_probs=10.2
Q ss_pred ccceeeecCcccc
Q 031253 112 LIEFKCRCGHLYC 124 (163)
Q Consensus 112 l~gf~CrCg~~fC 124 (163)
..-+.||||..|-
T Consensus 28 ~y~y~CrCGd~F~ 40 (83)
T 1wge_A 28 TYFYPCPCGDNFA 40 (83)
T ss_dssp EEEECCSSSSCEE
T ss_pred EEEEeCCCCCEEE
Confidence 3468899999883
No 134
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.04 E-value=24 Score=18.18 Aligned_cols=11 Identities=18% Similarity=0.800 Sum_probs=6.1
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elv_A 9 LYDCHICERKFK 20 (36)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCccC
Confidence 45665 555554
No 135
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.92 E-value=49 Score=20.72 Aligned_cols=26 Identities=23% Similarity=0.480 Sum_probs=18.6
Q ss_pred ccccccccccccccceee-ecCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKC-RCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~C-rCg~~fC~~ 126 (163)
...|..|...+.- ...- .||++||..
T Consensus 15 ~~~C~IC~~~~~~-p~~~~~CgH~fC~~ 41 (72)
T 2djb_A 15 YILCSICKGYLID-ATTITECLHTFCKS 41 (72)
T ss_dssp GGSCTTTSSCCSS-CEECSSSCCEECHH
T ss_pred CCCCCCCChHHHC-cCEECCCCCHHHHH
Confidence 5689999775543 3444 799999974
No 136
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=24.88 E-value=17 Score=25.20 Aligned_cols=32 Identities=19% Similarity=0.430 Sum_probs=23.2
Q ss_pred cccccccccccccc----cceeee-cCcccccCccCC
Q 031253 99 VKRRCEICNKKVGL----IEFKCR-CGHLYCGTHRYP 130 (163)
Q Consensus 99 ~~~rC~~C~kk~gl----~gf~Cr-Cg~~fC~~HR~~ 130 (163)
....|..|++.+-. .-.+|+ ||.+|-+-=-.+
T Consensus 26 ~~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~aggay~~ 62 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKP 62 (83)
T ss_dssp SCEECSSSCCEEEEEEETTEEEETTTCCEEECCSSSS
T ss_pred ccCcCCCCCCcceeccCCCeEECCCCCCEecCCEecc
Confidence 46799999985433 237999 999998874433
No 137
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.73 E-value=25 Score=17.99 Aligned_cols=9 Identities=33% Similarity=1.136 Sum_probs=4.1
Q ss_pred eeee-cCccc
Q 031253 115 FKCR-CGHLY 123 (163)
Q Consensus 115 f~Cr-Cg~~f 123 (163)
|.|. ||..|
T Consensus 10 ~~C~~C~k~f 19 (36)
T 2elr_A 10 HLCDMCGKKF 19 (36)
T ss_dssp CBCTTTCCBC
T ss_pred eecCcCCCCc
Confidence 4444 44444
No 138
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=24.57 E-value=23 Score=20.13 Aligned_cols=15 Identities=27% Similarity=0.724 Sum_probs=9.7
Q ss_pred ccceeee-cCcccccC
Q 031253 112 LIEFKCR-CGHLYCGT 126 (163)
Q Consensus 112 l~gf~Cr-Cg~~fC~~ 126 (163)
-..|+|. ||..|-..
T Consensus 6 ekp~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSP 21 (36)
T ss_dssp CCCCEETTTTEECSCH
T ss_pred ccCeECCCCCCccCCH
Confidence 3457777 77777643
No 139
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.73 E-value=25 Score=18.12 Aligned_cols=11 Identities=27% Similarity=0.996 Sum_probs=5.7
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2els_A 9 IFTCEYCNKVFK 20 (36)
T ss_dssp CEECTTTCCEES
T ss_pred CEECCCCCceeC
Confidence 35555 555554
No 140
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=23.62 E-value=59 Score=20.54 Aligned_cols=27 Identities=26% Similarity=0.577 Sum_probs=19.7
Q ss_pred cccccccccccccccceeee-cCcccccC
Q 031253 99 VKRRCEICNKKVGLIEFKCR-CGHLYCGT 126 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~gf~Cr-Cg~~fC~~ 126 (163)
....|..|...+.- ...-. ||++||..
T Consensus 14 ~~~~C~IC~~~~~~-p~~~~~CgH~fC~~ 41 (74)
T 2yur_A 14 DELLCLICKDIMTD-AVVIPCCGNSYCDE 41 (74)
T ss_dssp GGGSCSSSCCCCTT-CEECSSSCCEECTT
T ss_pred CCCCCcCCChHHhC-CeEcCCCCCHHHHH
Confidence 35689999765543 45567 99999985
No 141
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=23.57 E-value=52 Score=29.67 Aligned_cols=42 Identities=21% Similarity=0.378 Sum_probs=27.4
Q ss_pred cccccccccccc-cc--cceeee-cCcccccCccCCCCCCCcccch
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHLYCGTHRYPKEHACTFDFK 140 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~fC~~HR~~~~H~C~~dyk 140 (163)
.+..|..|++.+ || +|++|. |+..+-..---..-..|..|..
T Consensus 112 ~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~d~~ 157 (674)
T 3pfq_A 112 SPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHT 157 (674)
T ss_dssp SCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSSCCCSSSCSS
T ss_pred CCCCCCccccccchhhcCccccccCCcchhhhhhhccCcccccccc
Confidence 467999999975 55 799999 9887633322222355765543
No 142
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=22.71 E-value=23 Score=22.52 Aligned_cols=27 Identities=19% Similarity=0.475 Sum_probs=17.4
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 47 F~C~~C~~~L~~~~f~~~~~~~yC~~c 73 (77)
T 2egq_A 47 FHCKKCSVNLANKRFVFHQEQVYCPDC 73 (77)
T ss_dssp CBCSSSCCBCTTSCCCEETTEECCHHH
T ss_pred CEehhcCCCCCCCccEeECCEEEChHH
Confidence 467778887765556556566666543
No 143
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.70 E-value=29 Score=18.49 Aligned_cols=12 Identities=25% Similarity=1.115 Sum_probs=6.3
Q ss_pred ceeee-cCccccc
Q 031253 114 EFKCR-CGHLYCG 125 (163)
Q Consensus 114 gf~Cr-Cg~~fC~ 125 (163)
.|.|. ||..|-.
T Consensus 11 ~~~C~~C~k~f~~ 23 (42)
T 2ytb_A 11 PYRCDQCGKAFSQ 23 (42)
T ss_dssp SBCCTTTTCCBSS
T ss_pred CeeCCCccchhCC
Confidence 45555 5555543
No 144
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=28.37 E-value=18 Score=17.49 Aligned_cols=13 Identities=15% Similarity=0.700 Sum_probs=8.4
Q ss_pred ceeee-cCcccccC
Q 031253 114 EFKCR-CGHLYCGT 126 (163)
Q Consensus 114 gf~Cr-Cg~~fC~~ 126 (163)
.|.|. ||..|-..
T Consensus 3 ~~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 3 PYVCIHCQRQFADP 16 (30)
Confidence 46676 77777653
No 145
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=22.51 E-value=19 Score=18.41 Aligned_cols=12 Identities=25% Similarity=0.838 Sum_probs=7.5
Q ss_pred eeee-cCcccccC
Q 031253 115 FKCR-CGHLYCGT 126 (163)
Q Consensus 115 f~Cr-Cg~~fC~~ 126 (163)
|.|. ||..|-..
T Consensus 3 ~~C~~C~k~f~~~ 15 (32)
T 2kfq_A 3 FACPACPKRFMRS 15 (32)
T ss_dssp SSSSSSCTTHHHH
T ss_pred CCCCCCCcccCCH
Confidence 5666 77777543
No 146
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=22.18 E-value=54 Score=23.20 Aligned_cols=25 Identities=24% Similarity=0.735 Sum_probs=18.0
Q ss_pred cccccccccccccccceeee-cCccc
Q 031253 99 VKRRCEICNKKVGLIEFKCR-CGHLY 123 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~gf~Cr-Cg~~f 123 (163)
..-.|..|.--..-.-|.|| |+.+|
T Consensus 14 ~D~~C~VC~~~t~~~l~pCRvC~Rvf 39 (89)
T 1wil_A 14 NDEMCDVCEVWTAESLFPCRVCTRVF 39 (89)
T ss_dssp CSCCCTTTCCCCSSCCSSCSSSSSCC
T ss_pred CCcccCccccccccceeccccccccc
Confidence 34578888865444568899 88887
No 147
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=22.06 E-value=25 Score=23.54 Aligned_cols=24 Identities=38% Similarity=1.003 Sum_probs=18.2
Q ss_pred cccccccccccccccc---ceeee-cCc
Q 031253 98 SVKRRCEICNKKVGLI---EFKCR-CGH 121 (163)
Q Consensus 98 ~~~~rC~~C~kk~gl~---gf~Cr-Cg~ 121 (163)
+-...|..|+..+.+. ...|+ ||+
T Consensus 26 ~v~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 26 TLKYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCCEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred eEEEECCCCCCcceeCCCCCccCCCCCc
Confidence 3467999999997773 46788 766
No 148
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.01 E-value=51 Score=21.23 Aligned_cols=24 Identities=29% Similarity=0.836 Sum_probs=19.8
Q ss_pred ccccccccccccccceeee-cCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKCR-CGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~Cr-Cg~~fC~~ 126 (163)
...|..|+. ..-|+|- |+..||+.
T Consensus 12 ~~~C~vC~~---~~kY~CPrC~~~yCSl 36 (56)
T 2yqq_A 12 TVVCVICLE---KPKYRCPACRVPYCSV 36 (56)
T ss_dssp CCCCTTTCS---CCSEECTTTCCEESSH
T ss_pred CCccCcCcC---CCeeeCCCCCCCeeCH
Confidence 457999988 4568997 99999986
No 149
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.74 E-value=34 Score=18.64 Aligned_cols=11 Identities=27% Similarity=1.183 Sum_probs=6.1
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~F~ 23 (44)
T 2epv_A 12 PYECNECGKAFI 23 (44)
T ss_dssp SEECSSSCCEES
T ss_pred CeECCCCCcccC
Confidence 45665 555554
No 150
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=21.73 E-value=34 Score=18.15 Aligned_cols=11 Identities=27% Similarity=1.035 Sum_probs=6.1
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2epc_A 11 PYLCGQCGKSFT 22 (42)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCcccC
Confidence 45665 555554
No 151
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.58 E-value=27 Score=22.31 Aligned_cols=27 Identities=22% Similarity=0.321 Sum_probs=17.8
Q ss_pred cccccccccccccceeeecCcccccCc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGTH 127 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~H 127 (163)
-+|..|++.|....|.=+=|..||..|
T Consensus 42 F~C~~C~~~L~~~~~~~~~~~~yC~~~ 68 (80)
T 1x3h_A 42 FVCGDCFTSFSTGSFFELDGRPFCELH 68 (80)
T ss_dssp CBCSSSCCBSCSSCCEESSSCEECHHH
T ss_pred CChhhCCCCCCCCcEEeECCEEECHHH
Confidence 467788887766556555566666554
No 152
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.54 E-value=35 Score=18.80 Aligned_cols=10 Identities=40% Similarity=1.388 Sum_probs=4.5
Q ss_pred eeee-cCcccc
Q 031253 115 FKCR-CGHLYC 124 (163)
Q Consensus 115 f~Cr-Cg~~fC 124 (163)
|.|. ||..|-
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eon_A 13 YKCQVCGKAFR 23 (46)
T ss_dssp CBCSSSCCBCS
T ss_pred cCCCCCCcccC
Confidence 4444 444443
No 153
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.42 E-value=36 Score=18.58 Aligned_cols=11 Identities=27% Similarity=1.102 Sum_probs=5.2
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~F~ 23 (47)
T 2epx_A 12 PYECIECGKAFI 23 (47)
T ss_dssp SBCCSSSCCCBS
T ss_pred CEECCccCchhC
Confidence 34454 544443
No 154
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.37 E-value=34 Score=18.17 Aligned_cols=11 Identities=18% Similarity=0.917 Sum_probs=5.3
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 10 ~~~C~~C~k~f~ 21 (42)
T 2yte_A 10 PYSCAECKETFS 21 (42)
T ss_dssp SCBCTTTCCBCS
T ss_pred CeECCCCCCccC
Confidence 34554 555453
No 155
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=21.34 E-value=36 Score=21.26 Aligned_cols=31 Identities=13% Similarity=0.214 Sum_probs=21.6
Q ss_pred ccceeeecCcccccCccCCCCCCCcccchHh
Q 031253 112 LIEFKCRCGHLYCGTHRYPKEHACTFDFKKF 142 (163)
Q Consensus 112 l~gf~CrCg~~fC~~HR~~~~H~C~~dyk~~ 142 (163)
..+|.|.|-.-|=+.+=-.+.-.|.|+|.++
T Consensus 29 ~~~y~C~C~~Gf~G~~Ce~~i~~~~~~~~ea 59 (63)
T 1hae_A 29 PSRYLCKCQPGFTGARCTENVPMKVQNQEKA 59 (63)
T ss_dssp SCCEEEECCTTEESTTSCEECCSSCTTCTTS
T ss_pred CCCEEEECCCCCcCCccCcCcCcccccccch
Confidence 3579999988887776544556677777543
No 156
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=21.22 E-value=31 Score=25.39 Aligned_cols=27 Identities=22% Similarity=0.570 Sum_probs=19.7
Q ss_pred cccccccccccccccceee-ecCcccccC
Q 031253 99 VKRRCEICNKKVGLIEFKC-RCGHLYCGT 126 (163)
Q Consensus 99 ~~~rC~~C~kk~gl~gf~C-rCg~~fC~~ 126 (163)
....|..|...+.- .... .||++||..
T Consensus 53 ~~~~C~IC~~~~~~-p~~~~~CgH~fC~~ 80 (165)
T 2ckl_B 53 SELMCPICLDMLKN-TMTTKECLHRFCAD 80 (165)
T ss_dssp HHHBCTTTSSBCSS-EEEETTTCCEEEHH
T ss_pred CCCCCcccChHhhC-cCEeCCCCChhHHH
Confidence 34689999776544 4555 899999975
No 157
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=20.83 E-value=39 Score=21.42 Aligned_cols=25 Identities=28% Similarity=0.543 Sum_probs=18.9
Q ss_pred cccccccccccccceeeecCccccc
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCG 125 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~ 125 (163)
-+|..|++.|....|.=+=|..||.
T Consensus 28 F~C~~C~~~L~~~~~~~~~g~~yC~ 52 (76)
T 1iml_A 28 LKCEKCGKTLTSGGHAEHEGKPYCN 52 (76)
T ss_dssp CBCTTTCCBCCTTTEEEETTEEEET
T ss_pred CCccccCccCCCCceECcCCeEeeC
Confidence 4788888888776676676777776
No 158
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=20.66 E-value=31 Score=23.06 Aligned_cols=40 Identities=23% Similarity=0.494 Sum_probs=24.9
Q ss_pred ccccccccccccccceee-ecCcccccC---ccCCCCCCCcccch
Q 031253 100 KRRCEICNKKVGLIEFKC-RCGHLYCGT---HRYPKEHACTFDFK 140 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~C-rCg~~fC~~---HR~~~~H~C~~dyk 140 (163)
...|..|...+.- .... .||++||.. ..+.....|.+--.
T Consensus 22 ~~~C~IC~~~~~~-p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~ 65 (99)
T 2y43_A 22 LLRCGICFEYFNI-AMIIPQCSHNYCSLCIRKFLSYKTQCPTCCV 65 (99)
T ss_dssp HTBCTTTCSBCSS-EEECTTTCCEEEHHHHHHHHTTCCBCTTTCC
T ss_pred CCCcccCChhhCC-cCEECCCCCHhhHHHHHHHHHCCCCCCCCCC
Confidence 4689999876543 4445 799999974 12223456765443
No 159
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=20.45 E-value=41 Score=29.15 Aligned_cols=42 Identities=29% Similarity=0.493 Sum_probs=26.3
Q ss_pred cccccccccccc-cc--cceeee-cCcccccCccCCCCCCCcccch
Q 031253 99 VKRRCEICNKKV-GL--IEFKCR-CGHLYCGTHRYPKEHACTFDFK 140 (163)
Q Consensus 99 ~~~rC~~C~kk~-gl--~gf~Cr-Cg~~fC~~HR~~~~H~C~~dyk 140 (163)
.+..|..|++.+ |+ +|++|+ ||...=......-...|.-+.+
T Consensus 219 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~~ 264 (463)
T 3cxl_A 219 GPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLK 264 (463)
T ss_dssp SCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCGGGG
T ss_pred CCCcchhhhhhhhhHHhcCeeccccCcccccccccccccccccccc
Confidence 478999999976 55 699999 8765311111111346766654
No 160
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.36 E-value=32 Score=21.39 Aligned_cols=26 Identities=27% Similarity=0.499 Sum_probs=15.5
Q ss_pred cccccccccccccceeeecCcccccC
Q 031253 101 RRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 101 ~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
-+|..|++.|.-..|.=+=|..||..
T Consensus 32 F~C~~C~~~L~~~~~~~~~~~~yC~~ 57 (69)
T 2cur_A 32 FVCVTCSKKLAGQRFTAVEDQYYCVD 57 (69)
T ss_dssp TBCTTTCCBCTTSCEEECSSCEEEHH
T ss_pred CEECCCCCCCCCCccEeECCEEECHH
Confidence 46777787776545544445556544
No 161
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.31 E-value=31 Score=18.60 Aligned_cols=12 Identities=25% Similarity=1.104 Sum_probs=6.3
Q ss_pred ceeee-cCccccc
Q 031253 114 EFKCR-CGHLYCG 125 (163)
Q Consensus 114 gf~Cr-Cg~~fC~ 125 (163)
.|.|. ||..|-.
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2eoj_A 12 PYECCECGKVFSR 24 (44)
T ss_dssp SCEETTTTEECSS
T ss_pred CeeCCCCCCccCC
Confidence 45555 5555543
No 162
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=20.17 E-value=34 Score=23.91 Aligned_cols=26 Identities=23% Similarity=0.441 Sum_probs=18.4
Q ss_pred ccccccccccccccceeeecCcccccC
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~ 126 (163)
...|..|...+-- ...-.||++||..
T Consensus 52 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 77 (124)
T 3fl2_A 52 TFQCICCQELVFR-PITTVCQHNVCKD 77 (124)
T ss_dssp HTBCTTTSSBCSS-EEECTTSCEEEHH
T ss_pred CCCCCcCChHHcC-cEEeeCCCcccHH
Confidence 3579999876543 3344799999974
No 163
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.15 E-value=37 Score=18.63 Aligned_cols=10 Identities=20% Similarity=1.085 Sum_probs=4.5
Q ss_pred eeee-cCcccc
Q 031253 115 FKCR-CGHLYC 124 (163)
Q Consensus 115 f~Cr-Cg~~fC 124 (163)
|.|. ||..|-
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2enh_A 13 YECDVCRKAFS 23 (46)
T ss_dssp CBCTTTCCBCS
T ss_pred cCCCCcCchhC
Confidence 4444 444443
No 164
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=20.14 E-value=33 Score=19.50 Aligned_cols=13 Identities=31% Similarity=0.902 Sum_probs=8.2
Q ss_pred cceeee-cCccccc
Q 031253 113 IEFKCR-CGHLYCG 125 (163)
Q Consensus 113 ~gf~Cr-Cg~~fC~ 125 (163)
..|.|. ||..|-.
T Consensus 6 kp~~C~~C~k~F~~ 19 (48)
T 3iuf_A 6 KPYACDICGKRYKN 19 (48)
T ss_dssp SCEECTTTCCEESS
T ss_pred cCEECCCcCcccCC
Confidence 356776 7766754
No 165
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=20.09 E-value=34 Score=18.03 Aligned_cols=11 Identities=18% Similarity=0.842 Sum_probs=5.6
Q ss_pred ceeee-cCcccc
Q 031253 114 EFKCR-CGHLYC 124 (163)
Q Consensus 114 gf~Cr-Cg~~fC 124 (163)
.|.|. ||..|-
T Consensus 6 ~~~C~~C~k~f~ 17 (39)
T 1njq_A 6 SYTCSFCKREFR 17 (39)
T ss_dssp SEECTTTCCEES
T ss_pred ceECCCCCcccC
Confidence 35555 555553
No 166
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=20.08 E-value=75 Score=19.05 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=24.2
Q ss_pred ccccccccccccccceeeecCcccccCccCCCCCCCccc
Q 031253 100 KRRCEICNKKVGLIEFKCRCGHLYCGTHRYPKEHACTFD 138 (163)
Q Consensus 100 ~~rC~~C~kk~gl~gf~CrCg~~fC~~HR~~~~H~C~~d 138 (163)
..+|..|...+.- ...=.||++||..-.......|.+-
T Consensus 6 ~~~C~IC~~~~~~-p~~l~CgH~fC~~Ci~~~~~~CP~C 43 (56)
T 1bor_A 6 FLRCQQCQAEAKC-PKLLPCLHTLCSGCLEASGMQCPIC 43 (56)
T ss_dssp CSSCSSSCSSCBC-CSCSTTSCCSBTTTCSSSSSSCSSC
T ss_pred CCCceEeCCccCC-eEEcCCCCcccHHHHccCCCCCCcC
Confidence 4578888765443 2334599999987554445566654
No 167
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.05 E-value=84 Score=19.48 Aligned_cols=27 Identities=19% Similarity=0.448 Sum_probs=18.3
Q ss_pred ccccccccccccc--cceeeecCcccccC
Q 031253 100 KRRCEICNKKVGL--IEFKCRCGHLYCGT 126 (163)
Q Consensus 100 ~~rC~~C~kk~gl--~gf~CrCg~~fC~~ 126 (163)
...|..|...+.. .-....||++||..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~ 43 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRK 43 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHH
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHH
Confidence 4589999887543 22344699999853
Done!