Query 031256
Match_columns 163
No_of_seqs 158 out of 1044
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 18:23:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.4E-56 8.1E-61 329.1 20.9 160 4-163 7-166 (166)
2 2fu0_A Cyclophilin, putative; 100.0 3.9E-56 1.3E-60 326.1 19.7 157 7-163 4-160 (160)
3 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.7E-55 5.9E-60 323.2 19.6 154 10-163 2-156 (161)
4 1zkc_A Peptidyl-prolyl CIS-tra 100.0 3.6E-55 1.2E-59 329.8 20.2 160 4-163 15-175 (197)
5 2poe_A Cyclophilin-like protei 100.0 3.2E-55 1.1E-59 327.8 19.8 160 4-163 12-175 (185)
6 2b71_A Cyclophilin-like protei 100.0 3.3E-55 1.1E-59 330.0 19.5 157 7-163 37-193 (196)
7 2a2n_A Peptidylprolyl isomeras 100.0 8.9E-55 3.1E-59 323.1 20.4 159 4-162 17-176 (176)
8 2k7n_A Peptidyl-prolyl CIS-tra 100.0 4.3E-55 1.5E-59 330.5 18.7 159 5-163 8-166 (203)
9 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.4E-54 4.7E-59 328.5 18.9 159 5-163 3-173 (201)
10 1mzw_A Cyclophilin H, U-snRNP- 100.0 8E-54 2.7E-58 318.5 19.7 157 5-162 7-177 (177)
11 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.8E-53 6.2E-58 315.2 20.7 158 4-163 6-172 (172)
12 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.2E-53 4E-58 320.5 19.4 157 3-162 18-191 (191)
13 2hq6_A Serologically defined c 100.0 1.6E-53 5.4E-58 318.5 19.3 161 2-163 18-180 (185)
14 1qng_A Peptidyl-prolyl CIS-tra 100.0 2E-53 6.9E-58 314.6 19.4 154 7-162 2-170 (170)
15 1a58_A Cyclophilin; isomerase, 100.0 2.9E-53 9.8E-58 315.7 20.3 157 6-163 4-177 (177)
16 2wfi_A Peptidyl-prolyl CIS-tra 100.0 4.3E-53 1.5E-57 315.1 21.1 157 5-162 6-179 (179)
17 2haq_A Cyclophilin; rotamase, 100.0 2E-53 6.8E-58 314.7 19.2 157 4-162 7-172 (172)
18 2igv_A Peptidyl-prolyl CIS-tra 100.0 3E-53 1E-57 314.5 20.2 155 7-163 2-172 (173)
19 3pmp_A Cyclophilin A; peptidyl 100.0 5.1E-53 1.7E-57 311.0 20.6 155 7-163 1-164 (164)
20 2r99_A Peptidyl-prolyl CIS-tra 100.0 6.1E-53 2.1E-57 312.7 21.1 158 4-163 7-173 (173)
21 2z6w_A Peptidyl-prolyl CIS-tra 100.0 9E-53 3.1E-57 309.8 20.8 154 8-163 3-165 (165)
22 2he9_A NK-tumor recognition pr 100.0 2E-52 6.7E-57 314.2 21.0 158 5-163 16-190 (192)
23 3rdd_A Peptidyl-prolyl CIS-tra 100.0 1.6E-52 5.5E-57 313.1 20.2 157 5-163 19-184 (184)
24 3ich_A Peptidyl-prolyl CIS-tra 100.0 9.5E-53 3.2E-57 315.2 18.5 157 5-162 12-177 (188)
25 4fru_A Cyclophilin B, peptidyl 100.0 7.8E-53 2.7E-57 315.4 16.5 157 5-162 9-174 (185)
26 2poy_A Peptidyl-prolyl CIS-tra 100.0 3.9E-52 1.3E-56 311.2 19.3 156 4-161 15-186 (186)
27 3k2c_A Peptidyl-prolyl CIS-tra 100.0 1.1E-51 3.8E-56 310.5 21.2 158 4-163 23-191 (193)
28 3bkp_A Cyclophilin; malaria, i 100.0 2.9E-52 1E-56 321.2 17.9 161 2-163 15-193 (232)
29 1v9t_A Cyclophilin B; beta bar 100.0 3.4E-52 1.2E-56 307.2 17.3 156 5-163 1-166 (166)
30 1z81_A Cyclophilin; structural 100.0 5.3E-52 1.8E-56 318.5 18.8 158 4-162 55-229 (229)
31 3s6m_A Peptidyl-prolyl CIS-tra 100.0 7.1E-52 2.4E-56 305.9 17.2 153 7-162 2-167 (167)
32 1lop_A Cyclophilin A; rotamase 100.0 4.7E-52 1.6E-56 305.9 14.8 151 10-163 1-164 (164)
33 2ose_A Probable peptidyl-proly 100.0 5.3E-51 1.8E-55 314.7 17.7 158 3-163 9-207 (234)
34 2c3b_A Ppiase, cyclophilin; is 100.0 8.3E-52 2.9E-56 306.4 12.6 147 15-162 19-172 (172)
35 1ihg_A Cyclophilin 40; ppiase 100.0 1.2E-48 4E-53 319.8 19.8 153 8-162 15-184 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 2.9E-42 9.9E-47 279.6 9.5 136 6-142 168-345 (369)
37 2nnz_A Hypothetical protein; b 96.9 0.0033 1.1E-07 44.9 7.1 104 7-139 28-142 (153)
38 3kop_A Uncharacterized protein 95.6 0.25 8.7E-06 35.9 10.9 111 9-140 22-166 (188)
39 1zx8_A Hypothetical protein TM 94.8 0.26 8.8E-06 34.3 8.7 100 10-139 14-123 (136)
40 2khf_A PLNJ; anti-microbial, b 52.9 3.5 0.00012 19.4 0.3 15 34-48 4-18 (26)
41 1x7f_A Outer surface protein; 35.5 20 0.00069 29.0 2.4 50 90-140 326-376 (385)
42 3bbd_A Ribosome biogenesis pro 33.8 41 0.0014 24.7 3.7 47 9-56 76-124 (205)
43 2p0o_A Hypothetical protein DU 32.6 20 0.00068 28.9 1.9 50 90-140 300-350 (372)
44 3oii_A Essential for mitotic g 27.5 51 0.0018 25.0 3.3 33 9-42 111-144 (253)
45 2k9u_B Filamin-binding LIM pro 24.7 49 0.0017 15.8 1.8 12 105-116 9-20 (26)
46 3o7b_A Ribosome biogenesis NEP 22.5 73 0.0025 24.0 3.3 47 9-56 105-158 (244)
47 3evi_A Phosducin-like protein 21.6 1.7E+02 0.0057 18.7 4.9 36 19-56 25-63 (118)
No 1
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.4e-56 Score=329.06 Aligned_cols=160 Identities=67% Similarity=1.194 Sum_probs=153.4
Q ss_pred CCCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCC
Q 031256 4 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEI 83 (163)
Q Consensus 4 ~~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~ 83 (163)
+...++.|.|+|+.|+|+||||+++||++|+||++||+.+||+|+.||||+|+|++||||+.+++.++.++|+..+++|.
T Consensus 7 ~~~~~~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~ 86 (166)
T 2x7k_A 7 DSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDEL 86 (166)
T ss_dssp TTCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCC
T ss_pred cccCCCEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccc
Confidence 33467899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceEEEEEEEcC
Q 031256 84 KPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 163 (163)
Q Consensus 84 ~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~I~~~~vl~ 163 (163)
.+.++|.++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|++.+++++++|.++|+|.+|.|+.
T Consensus 87 ~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~~~i~~ 166 (166)
T 2x7k_A 87 HPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG 166 (166)
T ss_dssp CTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEEEEECC
T ss_pred ccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEeC
Confidence 78999998999999999999999999999999999999999999999999999999999999889999999999999873
No 2
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=3.9e-56 Score=326.12 Aligned_cols=157 Identities=48% Similarity=0.867 Sum_probs=150.7
Q ss_pred CCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCCCCC
Q 031256 7 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPE 86 (163)
Q Consensus 7 ~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~ 86 (163)
..+.|.|+|+.|+|+||||+++||++|+||++||+.+||+|+.||||+|+|++||||+.+++.+++++|+..+++|..+.
T Consensus 4 ~~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~ 83 (160)
T 2fu0_A 4 TPKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDH 83 (160)
T ss_dssp -CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTT
T ss_pred CCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCCccccccCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999998778
Q ss_pred CCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceEEEEEEEcC
Q 031256 87 LKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 163 (163)
Q Consensus 87 l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~I~~~~vl~ 163 (163)
++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|++.+++++++|.++|+|.+|.|++
T Consensus 84 l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~~ 160 (160)
T 2fu0_A 84 LNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKINN 160 (160)
T ss_dssp BCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC-
T ss_pred cccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEeC
Confidence 99998999999999999999999999999999999999999999999999999999999889999999999999875
No 3
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.7e-55 Score=323.21 Aligned_cols=154 Identities=49% Similarity=0.866 Sum_probs=149.0
Q ss_pred EEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 031256 10 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPELKH 89 (163)
Q Consensus 10 ~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~ 89 (163)
+|.|+|+.|+|+||||+++||++|+||++||+.+||+|+.||||+|+|++||||+.+++.++.++|+..+++|..+.++|
T Consensus 2 ~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h 81 (161)
T 2ok3_A 2 SVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKH 81 (161)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccccccCcCcCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999998778999
Q ss_pred CcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC-CCcccceEEEEEEEcC
Q 031256 90 TGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKD-DRPIHDVKILRTSVKD 163 (163)
Q Consensus 90 ~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~-~~p~~~i~I~~~~vl~ 163 (163)
.++|+||||+.++++++|||||+++++++||++|+|||+|++||+||++|++.+++++ ++|.++|+|.+|+|++
T Consensus 82 ~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~ 156 (161)
T 2ok3_A 82 NVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHA 156 (161)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEEC
T ss_pred CCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEec
Confidence 8899999999999999999999999999999999999999999999999999999887 9999999999999974
No 4
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=3.6e-55 Score=329.79 Aligned_cols=160 Identities=49% Similarity=0.879 Sum_probs=153.9
Q ss_pred CCCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCC
Q 031256 4 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEI 83 (163)
Q Consensus 4 ~~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~ 83 (163)
.++....|.|+|+.|+|+||||+++||++|+||++||+.+||+|+.||||+|+|++||||+.+++.++.++|+..+++|.
T Consensus 15 ~~~~~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~f~dE~ 94 (197)
T 1zkc_A 15 VPRGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEF 94 (197)
T ss_dssp CCCSCEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSCBCCCC
T ss_pred CCCCCcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCcccccc
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC-CCcccceEEEEEEEc
Q 031256 84 KPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKD-DRPIHDVKILRTSVK 162 (163)
Q Consensus 84 ~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~-~~p~~~i~I~~~~vl 162 (163)
++.++|.++|+||||+.++++++|||||+++++++||++|+|||+|++||+||++|++++++.+ ++|.++|+|.+|+++
T Consensus 95 ~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~ 174 (197)
T 1zkc_A 95 RPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVF 174 (197)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEE
T ss_pred CcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEE
Confidence 8899999999999999999999999999999999999999999999999999999999999887 999999999999987
Q ss_pred C
Q 031256 163 D 163 (163)
Q Consensus 163 ~ 163 (163)
+
T Consensus 175 ~ 175 (197)
T 1zkc_A 175 V 175 (197)
T ss_dssp E
T ss_pred c
Confidence 3
No 5
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=3.2e-55 Score=327.81 Aligned_cols=160 Identities=47% Similarity=0.845 Sum_probs=151.9
Q ss_pred CCCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCC
Q 031256 4 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEI 83 (163)
Q Consensus 4 ~~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~ 83 (163)
..+....|.|+|+.|+|+||||+++||++|+||++||+.+||+|+.||||+|+|++||||+.+++.++.++|+..+++|.
T Consensus 12 ~~~~~~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~ 91 (185)
T 2poe_A 12 ENLYFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEI 91 (185)
T ss_dssp ---CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCCBTTBSCBCCCC
T ss_pred cCCCceEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccc
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcceEEEeeeCC----CCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceEEEEE
Q 031256 84 KPELKHTGAGILSMANAG----PNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRT 159 (163)
Q Consensus 84 ~~~l~~~~~G~v~~~~~~----~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~I~~~ 159 (163)
.+.++|.++|+||||+.+ |++++|||||+++++++||++|+|||+|++||+||++|++.+++.+++|.++|+|.+|
T Consensus 92 ~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~ 171 (185)
T 2poe_A 92 YPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDI 171 (185)
T ss_dssp CTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEE
T ss_pred cCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEE
Confidence 789999889999999998 9999999999999999999999999999999999999999999988999999999999
Q ss_pred EEcC
Q 031256 160 SVKD 163 (163)
Q Consensus 160 ~vl~ 163 (163)
++++
T Consensus 172 ~i~~ 175 (185)
T 2poe_A 172 VIHS 175 (185)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9974
No 6
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.3e-55 Score=329.97 Aligned_cols=157 Identities=62% Similarity=1.038 Sum_probs=150.6
Q ss_pred CCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCCCCC
Q 031256 7 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPE 86 (163)
Q Consensus 7 ~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~ 86 (163)
.++.|.|+|+.|+|+||||+++||++|+||++||+.+||+|+.||||+|+|++||||+.+++.++.++|+..+++|..+.
T Consensus 37 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~ 116 (196)
T 2b71_A 37 ERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKE 116 (196)
T ss_dssp HSCEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSCBCCCCCTT
T ss_pred CCcEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred CCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceEEEEEEEcC
Q 031256 87 LKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 163 (163)
Q Consensus 87 l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~I~~~~vl~ 163 (163)
++|.++|+||||+.+|++++|||||+++++++||++|+|||||++||+||++|++.+++.+++|.++|+|.+|+|++
T Consensus 117 l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~i~~ 193 (196)
T 2b71_A 117 LKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILRTSTAV 193 (196)
T ss_dssp CCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEEEEC--
T ss_pred cCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEEEEEec
Confidence 99988999999999999999999999999999999999999999999999999999999889999999999999874
No 7
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.9e-55 Score=323.11 Aligned_cols=159 Identities=52% Similarity=0.876 Sum_probs=151.5
Q ss_pred CCCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCC
Q 031256 4 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEI 83 (163)
Q Consensus 4 ~~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~ 83 (163)
+......|.++|+.|+|+||||+++||++|+||++||+.+||+|+.||||+|+|++||||+.+++.++.++|+..+++|.
T Consensus 17 ~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~ 96 (176)
T 2a2n_A 17 PKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEF 96 (176)
T ss_dssp CCCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCC
T ss_pred CCCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCCcccCCcccccc
Confidence 44557789999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCC-CCCCcccceEEEEEEEc
Q 031256 84 KPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD-KDDRPIHDVKILRTSVK 162 (163)
Q Consensus 84 ~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~~p~~~i~I~~~~vl 162 (163)
.+.++|.++|+|+||+.++++++|||||++.++++||++|+|||+|++|||||++|++++++ .+++|.++|+|.+|.|.
T Consensus 97 ~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v~ 176 (176)
T 2a2n_A 97 HSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK 176 (176)
T ss_dssp CTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEEC
T ss_pred ccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEEC
Confidence 77899998999999999999999999999999999999999999999999999999999998 68999999999999873
No 8
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=4.3e-55 Score=330.50 Aligned_cols=159 Identities=67% Similarity=1.200 Sum_probs=152.9
Q ss_pred CCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCCC
Q 031256 5 DDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIK 84 (163)
Q Consensus 5 ~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~ 84 (163)
...++.|.|+|+.|+|+||||+++||++|+||++||+.+||+++.||||+|+|++||||+.+++.++.++|+..+++|..
T Consensus 8 ~~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~f~dE~~ 87 (203)
T 2k7n_A 8 SWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELH 87 (203)
T ss_dssp SCCCSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSCBCCCCC
T ss_pred ccCCCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCccccccc
Confidence 33678999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceEEEEEEEcC
Q 031256 85 PELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 163 (163)
Q Consensus 85 ~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~I~~~~vl~ 163 (163)
+.++|.++|+|+||+.++++++|||||++.++++||++|+|||||++|||||++|++.+++++++|.++|+|.+|+|++
T Consensus 88 ~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~~~v~~ 166 (203)
T 2k7n_A 88 PDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG 166 (203)
T ss_dssp CSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEEEEECC
T ss_pred ccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEEe
Confidence 8999998999999999999999999999999999999999999999999999999999998889999999999999975
No 9
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-54 Score=328.49 Aligned_cols=159 Identities=38% Similarity=0.673 Sum_probs=145.2
Q ss_pred CCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecC-----CCCCCCCCCCCCC----
Q 031256 5 DDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGG-----DPTGTGRGGDSIY---- 75 (163)
Q Consensus 5 ~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G-----~~~~~~~~~~~~~---- 75 (163)
++.+..|.|+|+.|+|+||||+++||+||+||++||+.+||+|+.||||+|+|++||| |+.+++.++.++|
T Consensus 3 ~~~~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~ 82 (201)
T 3bo7_A 3 LKKKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISG 82 (201)
T ss_dssp --CCEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCS
T ss_pred CCCceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCcccccccc
Confidence 4567899999999999999999999999999999999999999999999999999999 9998899999999
Q ss_pred ---CCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCccc
Q 031256 76 ---GHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIH 152 (163)
Q Consensus 76 ---~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~ 152 (163)
+..+++|.++.++|.++|+||||++++++++|||||+++++++||++|+|||+|++||+||++|++++++.+++|.+
T Consensus 83 ~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~ 162 (201)
T 3bo7_A 83 FPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLK 162 (201)
T ss_dssp STTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSS
T ss_pred ccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCC
Confidence 88999998789999889999999999999999999999999999999999999999999999999999998899999
Q ss_pred ceEEEEEEEcC
Q 031256 153 DVKILRTSVKD 163 (163)
Q Consensus 153 ~i~I~~~~vl~ 163 (163)
+|+|.+|++++
T Consensus 163 ~i~I~~~~v~~ 173 (201)
T 3bo7_A 163 PPKVEEIIVFK 173 (201)
T ss_dssp CCBEEEEEEEE
T ss_pred CeEEEEEEEEc
Confidence 99999999873
No 10
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=8e-54 Score=318.53 Aligned_cols=157 Identities=41% Similarity=0.742 Sum_probs=148.9
Q ss_pred CCCCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHhcCC--------cCCceEEEeecCceeecCCCC-CCCCC
Q 031256 5 DDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRRGY--------YNNSKFHRIIKDFIVQGGDPT-GTGRG 70 (163)
Q Consensus 5 ~~~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~~~~--------y~g~~f~rv~~~~~iq~G~~~-~~~~~ 70 (163)
.+.+++|+|+++ .|+|+||||++.||+||+||++||++++ |+|+.||||+|+|++||||+. +++.+
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 86 (177)
T 1mzw_A 7 SPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTG 86 (177)
T ss_dssp CCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCC
T ss_pred CCCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCC
Confidence 346889999974 8999999999999999999999999998 999999999999999999986 78888
Q ss_pred CCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCc
Q 031256 71 GDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRP 150 (163)
Q Consensus 71 ~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p 150 (163)
+.++|+..|++| ...++|.++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|++.+++++++|
T Consensus 87 g~si~g~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P 165 (177)
T 1mzw_A 87 VASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKP 165 (177)
T ss_dssp CCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCB
T ss_pred CCccCCCcccCc-ccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCC
Confidence 999999999999 4689999999999999999999999999999999999999999999999999999999999889999
Q ss_pred ccceEEEEEEEc
Q 031256 151 IHDVKILRTSVK 162 (163)
Q Consensus 151 ~~~i~I~~~~vl 162 (163)
.++|+|.+|++|
T Consensus 166 ~~~v~I~~cG~l 177 (177)
T 1mzw_A 166 KLPVVISQCGEM 177 (177)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCEEEEeceeC
Confidence 999999999986
No 11
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.8e-53 Score=315.18 Aligned_cols=158 Identities=46% Similarity=0.762 Sum_probs=146.2
Q ss_pred CCCCCCEEEEE-----ecceEEEEEEcCCCChHHHHHHHHHHhc--CC-cCCceEEEeecCceeecCCCC-CCCCCCCCC
Q 031256 4 SDDGPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSRR--GY-YNNSKFHRIIKDFIVQGGDPT-GTGRGGDSI 74 (163)
Q Consensus 4 ~~~~~~~v~~~-----ts~G~i~ieL~~~~aP~~~~nF~~l~~~--~~-y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~ 74 (163)
.+..+++|+|+ |+.|+|+||||+++||++|+||++||++ +| |+|+.||||+|+|++||||+. +++.++.++
T Consensus 6 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si 85 (172)
T 2cmt_A 6 QKRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSI 85 (172)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBT
T ss_pred CCCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCcc
Confidence 34568899999 6799999999999999999999999984 78 999999999999999999987 678889999
Q ss_pred CCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccce
Q 031256 75 YGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDV 154 (163)
Q Consensus 75 ~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i 154 (163)
|+..+++| ...++|.++|+||||+++|++++|||||++.++++||++|+|||+|++|||||++|++.++ .+++|.++|
T Consensus 86 ~g~~f~dE-~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v 163 (172)
T 2cmt_A 86 YGRKFDDE-NFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGS-KSGKVKEPV 163 (172)
T ss_dssp TBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCC-TTCCCSSCE
T ss_pred CCCccccc-ccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCCE
Confidence 99999999 4689999899999999999999999999999999999999999999999999999999887 568999999
Q ss_pred EEEEEEEcC
Q 031256 155 KILRTSVKD 163 (163)
Q Consensus 155 ~I~~~~vl~ 163 (163)
+|.+|++|+
T Consensus 164 ~I~~~g~l~ 172 (172)
T 2cmt_A 164 IISRCGELI 172 (172)
T ss_dssp EEEEEEEEC
T ss_pred EEEEeEeEC
Confidence 999999985
No 12
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-53 Score=320.51 Aligned_cols=157 Identities=44% Similarity=0.769 Sum_probs=146.3
Q ss_pred CCCCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHH---------------hcCCcCCceEEEeecCceeecCCCCCC
Q 031256 3 ASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELS---------------RRGYYNNSKFHRIIKDFIVQGGDPTGT 67 (163)
Q Consensus 3 ~~~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~---------------~~~~y~g~~f~rv~~~~~iq~G~~~~~ 67 (163)
.++..+..|.|+|+.|+|+||||+++||++|+||++|| +.+||+|+.||||+|+|++||||+.++
T Consensus 18 ~~~~~~~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~ 97 (191)
T 1w74_A 18 NSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGT 97 (191)
T ss_dssp ---CCSEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSS
T ss_pred cCCCCCeEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCC
Confidence 36777899999999999999999999999999999999 458999999999999999999999877
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEc--CHHHHHHHhcCCCC
Q 031256 68 GRGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCR--GMEVIKRLGSVQTD 145 (163)
Q Consensus 68 ~~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~--G~~vl~~I~~~~~~ 145 (163)
+.++ ++..|++|.++.++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++ ||+||++|++++++
T Consensus 98 G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~ 174 (191)
T 1w74_A 98 GRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATD 174 (191)
T ss_dssp SSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBC
T ss_pred CCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcC
Confidence 7766 578899998789999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CCCCcccceEEEEEEEc
Q 031256 146 KDDRPIHDVKILRTSVK 162 (163)
Q Consensus 146 ~~~~p~~~i~I~~~~vl 162 (163)
.+++|.++|+|.+|+|+
T Consensus 175 ~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 175 GNDRPTDPVVIESITIS 191 (191)
T ss_dssp TTSCBSSCCEEEEEEEC
T ss_pred CCCCcCCCeEEEEEEEC
Confidence 88999999999999985
No 13
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.6e-53 Score=318.52 Aligned_cols=161 Identities=47% Similarity=0.811 Sum_probs=152.2
Q ss_pred CCCCCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCC
Q 031256 2 LASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFED 81 (163)
Q Consensus 2 ~~~~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~ 81 (163)
..+++.+++|+|+|+.|+|+||||+++||++|+||++||+.+||+|+.||||+|+|++||||+.+++.++.++|+..+++
T Consensus 18 ~~~~~~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~d 97 (185)
T 2hq6_A 18 GSEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKD 97 (185)
T ss_dssp TCCCCCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCC
T ss_pred ccCCCCCCEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCCcccc
Confidence 45677789999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred CCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHH--HHHHhcCCCCCCCCcccceEEEEE
Q 031256 82 EIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEV--IKRLGSVQTDKDDRPIHDVKILRT 159 (163)
Q Consensus 82 e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~v--l~~I~~~~~~~~~~p~~~i~I~~~ 159 (163)
|..+.++|.++|+||||+.++++++|||||+++++++||++|+|||||+ ||++ +++|++++++++++|.++|+|.+|
T Consensus 98 E~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~~ 176 (185)
T 2hq6_A 98 EFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSC 176 (185)
T ss_dssp CCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEEE
T ss_pred ccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEEE
Confidence 9877899999999999999999999999999999999999999999999 8877 468999999899999999999999
Q ss_pred EEcC
Q 031256 160 SVKD 163 (163)
Q Consensus 160 ~vl~ 163 (163)
++++
T Consensus 177 ~v~~ 180 (185)
T 2hq6_A 177 EVLF 180 (185)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9873
No 14
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2e-53 Score=314.64 Aligned_cols=154 Identities=47% Similarity=0.786 Sum_probs=146.3
Q ss_pred CCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHh-cCC--------cCCceEEEeecCceeecCCCC-CCCCCC
Q 031256 7 GPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSR-RGY--------YNNSKFHRIIKDFIVQGGDPT-GTGRGG 71 (163)
Q Consensus 7 ~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~-~~~--------y~g~~f~rv~~~~~iq~G~~~-~~~~~~ 71 (163)
.+++|+|+++ .|+|+||||+++||+||+||++||+ .+| |+|+.||||+|+|++||||+. +++.++
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 81 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGG 81 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCC
Confidence 5789999998 8999999999999999999999998 488 999999999999999999986 788889
Q ss_pred CCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcc
Q 031256 72 DSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPI 151 (163)
Q Consensus 72 ~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~ 151 (163)
.++|+..+++| ...++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|++.++ ++++|.
T Consensus 82 ~si~g~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~ 159 (170)
T 1qng_A 82 ESIYGRSFTDE-NFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYVK 159 (170)
T ss_dssp CBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCS
T ss_pred ccccCCccccc-ccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCCC
Confidence 99999999999 4689999999999999999999999999999999999999999999999999999999998 678999
Q ss_pred cceEEEEEEEc
Q 031256 152 HDVKILRTSVK 162 (163)
Q Consensus 152 ~~i~I~~~~vl 162 (163)
++|+|.+|++|
T Consensus 160 ~~v~I~~cG~l 170 (170)
T 1qng_A 160 RSVVITDCGEL 170 (170)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEeceeC
Confidence 99999999986
No 15
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=2.9e-53 Score=315.65 Aligned_cols=157 Identities=47% Similarity=0.816 Sum_probs=147.9
Q ss_pred CCCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHhc--------C---CcCCceEEEeecCceeecCCCC-CCC
Q 031256 6 DGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRR--------G---YYNNSKFHRIIKDFIVQGGDPT-GTG 68 (163)
Q Consensus 6 ~~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~~--------~---~y~g~~f~rv~~~~~iq~G~~~-~~~ 68 (163)
..+++|+|+++ .|+|+||||++.||+||+||++||++ + ||+|+.||||+|+|++||||+. +++
T Consensus 4 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 83 (177)
T 1a58_A 4 KDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDG 83 (177)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSS
T ss_pred CCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCC
Confidence 45789999975 79999999999999999999999984 3 8999999999999999999986 788
Q ss_pred CCCCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCC
Q 031256 69 RGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDD 148 (163)
Q Consensus 69 ~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~ 148 (163)
.++.++|+..|++|. ..++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|++.+++.++
T Consensus 84 ~gg~si~g~~f~dE~-~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~ 162 (177)
T 1a58_A 84 TGGESIYGGMFDDEE-FVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKN 162 (177)
T ss_dssp SCCCCTTSSCBCCCC-CCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS
T ss_pred CCCCcccCCcccCcc-cCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCC
Confidence 889999999999994 5789999999999999999999999999999999999999999999999999999999999889
Q ss_pred CcccceEEEEEEEcC
Q 031256 149 RPIHDVKILRTSVKD 163 (163)
Q Consensus 149 ~p~~~i~I~~~~vl~ 163 (163)
+|.++|+|.+|++|.
T Consensus 163 ~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 163 RPLADVVILNCGELV 177 (177)
T ss_dssp CBSSCEEEEEEEEEC
T ss_pred cCCCCeEEEEeEEEC
Confidence 999999999999974
No 16
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=4.3e-53 Score=315.12 Aligned_cols=157 Identities=45% Similarity=0.778 Sum_probs=146.8
Q ss_pred CCCCCEEEEEe-----cceEEEEEEcCCCChHHHHHHHHHHh-----------cCCcCCceEEEeecCceeecCCCC-CC
Q 031256 5 DDGPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSR-----------RGYYNNSKFHRIIKDFIVQGGDPT-GT 67 (163)
Q Consensus 5 ~~~~~~v~~~t-----s~G~i~ieL~~~~aP~~~~nF~~l~~-----------~~~y~g~~f~rv~~~~~iq~G~~~-~~ 67 (163)
...+++|+|+. +.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|++||||+. ++
T Consensus 6 ~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 85 (179)
T 2wfi_A 6 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGN 85 (179)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCC
Confidence 34588999986 48999999999999999999999996 568999999999999999999986 78
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC
Q 031256 68 GRGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKD 147 (163)
Q Consensus 68 ~~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~ 147 (163)
+.++.++|+..+++| ...++|.++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++.+++++
T Consensus 86 g~gg~si~g~~f~dE-~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~ 164 (179)
T 2wfi_A 86 GRGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAA 164 (179)
T ss_dssp SSCCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTT
T ss_pred CCCCCcccCCccccc-ccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCC
Confidence 888999999999999 4678999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCcccceEEEEEEEc
Q 031256 148 DRPIHDVKILRTSVK 162 (163)
Q Consensus 148 ~~p~~~i~I~~~~vl 162 (163)
++|.++|+|.+|++|
T Consensus 165 ~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 165 SKPFAEVRILSCGEL 179 (179)
T ss_dssp SCBSSCEEEEEEEEC
T ss_pred CCCCCCeEEEeCeeC
Confidence 999999999999986
No 17
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=2e-53 Score=314.67 Aligned_cols=157 Identities=46% Similarity=0.836 Sum_probs=149.0
Q ss_pred CCCCCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHH--hcCC-cCCceEEEeecCceeecCC-CCCCCCCCCCC
Q 031256 4 SDDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQGGD-PTGTGRGGDSI 74 (163)
Q Consensus 4 ~~~~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~--~~~~-y~g~~f~rv~~~~~iq~G~-~~~~~~~~~~~ 74 (163)
++..+++|+|+.+ .|+|+||||+++||++|+||++|| +.+| |+|+.||||+|+|++|||| +.+++.++.++
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 86 (172)
T 2haq_A 7 EPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSI 86 (172)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCS
T ss_pred CCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccc
Confidence 6788999999865 799999999999999999999999 6889 9999999999999999999 55788889999
Q ss_pred CCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccce
Q 031256 75 YGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDV 154 (163)
Q Consensus 75 ~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i 154 (163)
|+..+++| ++.++|. +|+||||+.++++++|||||+++++++||++|+|||+|++||+||++|++.+++++++|.++|
T Consensus 87 ~g~~f~dE-~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v 164 (172)
T 2haq_A 87 YGEKFADE-NLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPV 164 (172)
T ss_dssp SSSCBCCC-CCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCE
T ss_pred cCCcccCc-CCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCe
Confidence 99999999 6789999 999999999999999999999999999999999999999999999999999998888999999
Q ss_pred EEEEEEEc
Q 031256 155 KILRTSVK 162 (163)
Q Consensus 155 ~I~~~~vl 162 (163)
+|.+|++|
T Consensus 165 ~I~~~g~l 172 (172)
T 2haq_A 165 KIVASGEL 172 (172)
T ss_dssp EEEEEEEC
T ss_pred EEEEeEEC
Confidence 99999986
No 18
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=3e-53 Score=314.47 Aligned_cols=155 Identities=46% Similarity=0.804 Sum_probs=146.1
Q ss_pred CCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHhc--C--------CcCCceEEEeecCceeecCCCC-CCCCC
Q 031256 7 GPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRR--G--------YYNNSKFHRIIKDFIVQGGDPT-GTGRG 70 (163)
Q Consensus 7 ~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~~--~--------~y~g~~f~rv~~~~~iq~G~~~-~~~~~ 70 (163)
.+++|+|+++ .|+|+||||++.||+||+||++||++ + ||+|+.||||+|+|++||||+. +++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 3689999998 89999999999999999999999986 5 7999999999999999999987 67888
Q ss_pred CCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCc
Q 031256 71 GDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRP 150 (163)
Q Consensus 71 ~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p 150 (163)
+.++|+..+++| ...++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|++.++ .+++|
T Consensus 82 g~siyg~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P 159 (173)
T 2igv_A 82 GESIYGEKFPDE-NFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGS-QSGKP 159 (173)
T ss_dssp CCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCC
T ss_pred CCccCCCcccCc-ccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCC
Confidence 999999999999 4689999999999999999999999999999999999999999999999999999999987 56899
Q ss_pred ccceEEEEEEEcC
Q 031256 151 IHDVKILRTSVKD 163 (163)
Q Consensus 151 ~~~i~I~~~~vl~ 163 (163)
.++|+|.+|++|+
T Consensus 160 ~~~v~I~~~g~l~ 172 (173)
T 2igv_A 160 VKDCMIADCGQLK 172 (173)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCEEEEEeEEEc
Confidence 9999999999985
No 19
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=5.1e-53 Score=311.03 Aligned_cols=155 Identities=43% Similarity=0.772 Sum_probs=145.3
Q ss_pred CCCEEEEE-----ecceEEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceEEEeecCceeecCC-CCCCCCCCCCCCCC
Q 031256 7 GPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGD-PTGTGRGGDSIYGH 77 (163)
Q Consensus 7 ~~~~v~~~-----ts~G~i~ieL~~~~aP~~~~nF~~l~~--~~~-y~g~~f~rv~~~~~iq~G~-~~~~~~~~~~~~~~ 77 (163)
.+++|+|+ |+.|+|+||||+++||+||+||++||+ .+| |+|+.|||++|+|++|||| +.+++.++.++|+.
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~ 80 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGE 80 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCc
Confidence 36788887 668999999999999999999999999 788 9999999999999999999 55788899999999
Q ss_pred cCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceEEE
Q 031256 78 VFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKIL 157 (163)
Q Consensus 78 ~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~I~ 157 (163)
.+++| ++.++|.++|+||||+.++++++|||||++.++++||++|+|||||++||+||++|++.+++ +++|.++|+|.
T Consensus 81 ~~~dE-~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~I~ 158 (164)
T 3pmp_A 81 KFADE-NFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIKIT 158 (164)
T ss_dssp CBCCC-CCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEE
T ss_pred ccccc-ccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEEEE
Confidence 99999 67899998999999999999999999999999999999999999999999999999999985 78999999999
Q ss_pred EEEEcC
Q 031256 158 RTSVKD 163 (163)
Q Consensus 158 ~~~vl~ 163 (163)
+|++|+
T Consensus 159 ~cg~l~ 164 (164)
T 3pmp_A 159 DCGTVA 164 (164)
T ss_dssp EEEEC-
T ss_pred eCeEEC
Confidence 999985
No 20
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=6.1e-53 Score=312.72 Aligned_cols=158 Identities=43% Similarity=0.744 Sum_probs=145.6
Q ss_pred CCCCCCEEEEE-----ecceEEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceEEEeecCceeecCCCC-CCCCCCCCC
Q 031256 4 SDDGPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGDPT-GTGRGGDSI 74 (163)
Q Consensus 4 ~~~~~~~v~~~-----ts~G~i~ieL~~~~aP~~~~nF~~l~~--~~~-y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~ 74 (163)
.+..+++|+|+ |+.|+|+||||+++||++|+||++||+ .+| |+|+.||||+|+|++||||+. +++.++.++
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 86 (173)
T 2r99_A 7 KARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSI 86 (173)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBT
T ss_pred cccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCcc
Confidence 34568899999 578999999999999999999999995 677 999999999999999999987 678888999
Q ss_pred CCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccce
Q 031256 75 YGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDV 154 (163)
Q Consensus 75 ~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i 154 (163)
|+..|++| ...++|.++|+||||+.++++++|||||++.++++||++|+|||+|++|||||++|++.+++ +++|.++|
T Consensus 87 ~g~~f~dE-~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v 164 (173)
T 2r99_A 87 YGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKV 164 (173)
T ss_dssp TBSCBCCC-CCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCE
T ss_pred CCCcccCc-ccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCe
Confidence 99999999 56899999999999999999999999999999999999999999999999999999999874 58999999
Q ss_pred EEEEEEEcC
Q 031256 155 KILRTSVKD 163 (163)
Q Consensus 155 ~I~~~~vl~ 163 (163)
+|.+|++|+
T Consensus 165 ~I~~cG~l~ 173 (173)
T 2r99_A 165 IIADCGEYV 173 (173)
T ss_dssp EEEEEEECC
T ss_pred EEEEeeeEC
Confidence 999999984
No 21
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=9e-53 Score=309.80 Aligned_cols=154 Identities=46% Similarity=0.775 Sum_probs=145.7
Q ss_pred CCEEEEEe-----cceEEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceEEEeecCceeecCCCC-CCCCCCCCCCCCc
Q 031256 8 PPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGDPT-GTGRGGDSIYGHV 78 (163)
Q Consensus 8 ~~~v~~~t-----s~G~i~ieL~~~~aP~~~~nF~~l~~--~~~-y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~~~~~ 78 (163)
+++|+|++ +.|+|+||||+++||+||+||++||+ .+| |+|+.||||+|+|++||||+. +++.++.++|+..
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 82 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR 82 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCc
Confidence 68999998 47999999999999999999999999 899 999999999999999999996 6788889999999
Q ss_pred CCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceEEEE
Q 031256 79 FEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILR 158 (163)
Q Consensus 79 ~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~I~~ 158 (163)
+++| .+.++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|++.++ .+++|.++|+|.+
T Consensus 83 f~dE-~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~~ 160 (165)
T 2z6w_A 83 FPDE-NFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSGRTSKKIVITD 160 (165)
T ss_dssp BCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEE
T ss_pred ccCc-ccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCcEEEEE
Confidence 9999 5789999899999999999999999999999999999999999999999999999999885 6789999999999
Q ss_pred EEEcC
Q 031256 159 TSVKD 163 (163)
Q Consensus 159 ~~vl~ 163 (163)
|++|.
T Consensus 161 ~g~l~ 165 (165)
T 2z6w_A 161 CGQLS 165 (165)
T ss_dssp EEECC
T ss_pred eEEEC
Confidence 99974
No 22
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-52 Score=314.25 Aligned_cols=158 Identities=46% Similarity=0.825 Sum_probs=146.8
Q ss_pred CCCCCEEEEEe-----cceEEEEEEcCCCChHHHHHHHHHHh-----------cCCcCCceEEEeecCceeecCCCC-CC
Q 031256 5 DDGPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSR-----------RGYYNNSKFHRIIKDFIVQGGDPT-GT 67 (163)
Q Consensus 5 ~~~~~~v~~~t-----s~G~i~ieL~~~~aP~~~~nF~~l~~-----------~~~y~g~~f~rv~~~~~iq~G~~~-~~ 67 (163)
...+++|+|+. +.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|++||||+. ++
T Consensus 16 ~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~ 95 (192)
T 2he9_A 16 PRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGN 95 (192)
T ss_dssp ---CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCC
Confidence 35678999987 47999999999999999999999995 578999999999999999999986 78
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC
Q 031256 68 GRGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKD 147 (163)
Q Consensus 68 ~~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~ 147 (163)
+.++.++|+..|++| ...++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|++.+++++
T Consensus 96 G~gg~siyg~~f~dE-~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~ 174 (192)
T 2he9_A 96 GKGGESIYGGYFKDE-NFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAA 174 (192)
T ss_dssp SSCCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTT
T ss_pred CCCCCcccCCcccCc-cccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCC
Confidence 889999999999999 4678999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCcccceEEEEEEEcC
Q 031256 148 DRPIHDVKILRTSVKD 163 (163)
Q Consensus 148 ~~p~~~i~I~~~~vl~ 163 (163)
++|.++|+|.+|+++.
T Consensus 175 ~~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 175 SRPYADVRVIDCGVLA 190 (192)
T ss_dssp SCBSSCEEEEEEEECC
T ss_pred CCCcCCeEEEEeEEEc
Confidence 9999999999999974
No 23
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=1.6e-52 Score=313.10 Aligned_cols=157 Identities=45% Similarity=0.748 Sum_probs=146.1
Q ss_pred CCCCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHhcCC---cCCceEEEeecCceeecCCCC-CCCCCCCCCC
Q 031256 5 DDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRRGY---YNNSKFHRIIKDFIVQGGDPT-GTGRGGDSIY 75 (163)
Q Consensus 5 ~~~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~~~~---y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~~ 75 (163)
+..+++|+|+|+ .|+|+||||++.||++|+||++||+.++ |+|+.||||+|+|++||||+. +++.++.++|
T Consensus 19 ~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 98 (184)
T 3rdd_A 19 GMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIY 98 (184)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred cCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccC
Confidence 456899999998 8999999999999999999999997655 999999999999999999954 7788899999
Q ss_pred CCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceE
Q 031256 76 GHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVK 155 (163)
Q Consensus 76 ~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~ 155 (163)
+..+++| ...++|.++|+|+||+.++++++|||||+++++++||++|+|||+|++|||||++|+++++ ++++|.++|+
T Consensus 99 g~~~~de-~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~-~~g~P~~~v~ 176 (184)
T 3rdd_A 99 GEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGS-RNGKTSKKIT 176 (184)
T ss_dssp BSCBCCC-CCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCCSSCEE
T ss_pred CCcccCc-ccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCC-CCCCCcCCeE
Confidence 9999998 4689999999999999999999999999999999999999999999999999999999986 5789999999
Q ss_pred EEEEEEcC
Q 031256 156 ILRTSVKD 163 (163)
Q Consensus 156 I~~~~vl~ 163 (163)
|.+|++|+
T Consensus 177 I~~cG~l~ 184 (184)
T 3rdd_A 177 IADCGQLE 184 (184)
T ss_dssp EEEEEECC
T ss_pred EEeCeEEC
Confidence 99999986
No 24
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=9.5e-53 Score=315.18 Aligned_cols=157 Identities=48% Similarity=0.834 Sum_probs=147.4
Q ss_pred CCCCCEEEEEe-----cceEEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceEEEeecCceeecCC-CCCCCCCCCCCC
Q 031256 5 DDGPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGD-PTGTGRGGDSIY 75 (163)
Q Consensus 5 ~~~~~~v~~~t-----s~G~i~ieL~~~~aP~~~~nF~~l~~--~~~-y~g~~f~rv~~~~~iq~G~-~~~~~~~~~~~~ 75 (163)
+..+++|+|++ +.|+|+||||++.||+||+||++||+ .+| |+|+.||||+|+|++|||| +.+++.++.++|
T Consensus 12 p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 91 (188)
T 3ich_A 12 PKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIY 91 (188)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred CCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCcccc
Confidence 44467888985 58999999999999999999999995 689 9999999999999999999 567888999999
Q ss_pred CCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceE
Q 031256 76 GHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVK 155 (163)
Q Consensus 76 ~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~ 155 (163)
+..+++| +..++|.++|+||||+.++++++|||||++.++++||++|+|||+|++||+||++|++.+++.+++|.++|+
T Consensus 92 g~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~ 170 (188)
T 3ich_A 92 GERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVI 170 (188)
T ss_dssp BSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEE
T ss_pred CCccccc-ccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEE
Confidence 9999999 678999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred EEEEEEc
Q 031256 156 ILRTSVK 162 (163)
Q Consensus 156 I~~~~vl 162 (163)
|.+|+++
T Consensus 171 I~~~~~l 177 (188)
T 3ich_A 171 IADCGKI 177 (188)
T ss_dssp EEEEEEE
T ss_pred EEEeEEE
Confidence 9999987
No 25
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=7.8e-53 Score=315.40 Aligned_cols=157 Identities=48% Similarity=0.810 Sum_probs=149.1
Q ss_pred CCCCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHhc--C-CcCCceEEEeecCceeecCCCC-CCCCCCCCCC
Q 031256 5 DDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRR--G-YYNNSKFHRIIKDFIVQGGDPT-GTGRGGDSIY 75 (163)
Q Consensus 5 ~~~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~~--~-~y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~~ 75 (163)
++.+++|+|+++ .|+|+||||++.||+||+||++||++ + +|+|+.|||++|+|++||||+. +++.++.++|
T Consensus 9 p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 88 (185)
T 4fru_A 9 PKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIY 88 (185)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred CCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCcccc
Confidence 567899999998 89999999999999999999999976 5 7999999999999999999987 7788899999
Q ss_pred CCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceE
Q 031256 76 GHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVK 155 (163)
Q Consensus 76 ~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~ 155 (163)
+..+++| ...++|.++|+||||+.++++++|||||+++++++||++|+|||||++||+||++|++++++.+++|.++|+
T Consensus 89 g~~f~de-~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~ 167 (185)
T 4fru_A 89 GERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVT 167 (185)
T ss_dssp BSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEE
T ss_pred CCccCcc-ccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEE
Confidence 9999999 568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEc
Q 031256 156 ILRTSVK 162 (163)
Q Consensus 156 I~~~~vl 162 (163)
|.+|+++
T Consensus 168 I~~~g~l 174 (185)
T 4fru_A 168 IADCGKI 174 (185)
T ss_dssp EEEEEEE
T ss_pred EEEceEE
Confidence 9999987
No 26
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=3.9e-52 Score=311.20 Aligned_cols=156 Identities=48% Similarity=0.796 Sum_probs=144.0
Q ss_pred CCCCCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHh--cCC--------cCCceEEEeecCceeecCCCC-CC
Q 031256 4 SDDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSR--RGY--------YNNSKFHRIIKDFIVQGGDPT-GT 67 (163)
Q Consensus 4 ~~~~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~--~~~--------y~g~~f~rv~~~~~iq~G~~~-~~ 67 (163)
....+++|+|+++ .|+|+||||+++||++|+||++||+ .+| |+|+.||||+|+|++||||+. ++
T Consensus 15 ~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~ 94 (186)
T 2poy_A 15 YFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGD 94 (186)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSS
T ss_pred ccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCC
Confidence 4567899999987 8999999999999999999999996 578 999999999999999999986 77
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC
Q 031256 68 GRGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKD 147 (163)
Q Consensus 68 ~~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~ 147 (163)
+.++.++|+..|++| ...++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|++.++ .+
T Consensus 95 G~gg~si~g~~f~dE-~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~ 172 (186)
T 2poy_A 95 GTGGESIYGSKFRDE-NFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QN 172 (186)
T ss_dssp SSCCCCTTC-CBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TT
T ss_pred CCCCCccCCCcccCc-ccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-CC
Confidence 888999999999999 4689999999999999999999999999999999999999999999999999999999998 67
Q ss_pred CCcccceEEEEEEE
Q 031256 148 DRPIHDVKILRTSV 161 (163)
Q Consensus 148 ~~p~~~i~I~~~~v 161 (163)
++|.++|+|.+|++
T Consensus 173 ~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 173 GKPTKSVCITASGV 186 (186)
T ss_dssp SCCSSCEEEEEEEC
T ss_pred CCCCCCEEEEeCCC
Confidence 89999999999984
No 27
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=1.1e-51 Score=310.50 Aligned_cols=158 Identities=43% Similarity=0.721 Sum_probs=146.0
Q ss_pred CCCCCCEEEEE-----ecceEEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceEEEeecCceeecCCC-CCCCCCCCCC
Q 031256 4 SDDGPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGDP-TGTGRGGDSI 74 (163)
Q Consensus 4 ~~~~~~~v~~~-----ts~G~i~ieL~~~~aP~~~~nF~~l~~--~~~-y~g~~f~rv~~~~~iq~G~~-~~~~~~~~~~ 74 (163)
+...+++|+|+ |+.|+|+||||+++||++|+||++||+ .+| |+|+.||||+|+|++||||+ .+++.++.++
T Consensus 23 ~~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 102 (193)
T 3k2c_A 23 AKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSI 102 (193)
T ss_dssp C--CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCT
T ss_pred cccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCccc
Confidence 44567899999 558999999999999999999999998 667 99999999999999999995 4778889999
Q ss_pred CCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCcc--c
Q 031256 75 YGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPI--H 152 (163)
Q Consensus 75 ~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~--~ 152 (163)
|+..+++| .+.++|.++|+|+||+.++++++|||||+++++++||++|+|||+|++|||||++|++.+++ +++|. +
T Consensus 103 ~g~~f~dE-~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~ 180 (193)
T 3k2c_A 103 YGEKFPDE-NFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGY 180 (193)
T ss_dssp TSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTC
T ss_pred CCCccccc-ccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCc
Confidence 99999999 67899999999999999999999999999999999999999999999999999999999986 67999 9
Q ss_pred ceEEEEEEEcC
Q 031256 153 DVKILRTSVKD 163 (163)
Q Consensus 153 ~i~I~~~~vl~ 163 (163)
+|+|.+|++|+
T Consensus 181 ~v~I~~cG~l~ 191 (193)
T 3k2c_A 181 RIEIRDCGVLG 191 (193)
T ss_dssp CEEEEEEEECC
T ss_pred cEEEEEceEeC
Confidence 99999999985
No 28
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-52 Score=321.15 Aligned_cols=161 Identities=44% Similarity=0.751 Sum_probs=150.3
Q ss_pred CCCCCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCC--CCcC
Q 031256 2 LASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIY--GHVF 79 (163)
Q Consensus 2 ~~~~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~--~~~~ 79 (163)
..+++.+..|.|+|+.|+|+||||++.||++|+||++||+.+||+|+.||||+|+|++||||+.+++.++.++| +..|
T Consensus 15 ~~~p~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~g~~f 94 (232)
T 3bkp_A 15 YFQGSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDGKPF 94 (232)
T ss_dssp GCCCSCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTTTCCB
T ss_pred cccCCCCCEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccCCCcc
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999 8899
Q ss_pred CCCCCCCCCCCcceEEEeeeCCC--------------CCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHH--HHHHhcCC
Q 031256 80 EDEIKPELKHTGAGILSMANAGP--------------NTNGSQFFITLAPASHLDGKHTIFGRVCRGMEV--IKRLGSVQ 143 (163)
Q Consensus 80 ~~e~~~~l~~~~~G~v~~~~~~~--------------~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~v--l~~I~~~~ 143 (163)
++|..+.++|..+|+||||+.++ ++++|||||+++++++||++|+|||+|+ ||++ |++|++++
T Consensus 95 ~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~ 173 (232)
T 3bkp_A 95 DVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLE 173 (232)
T ss_dssp CCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSC
T ss_pred CCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCC
Confidence 99987889999999999999987 6999999999999999999999999999 7765 89999999
Q ss_pred CCCCCCcccceEEEEEEEcC
Q 031256 144 TDKDDRPIHDVKILRTSVKD 163 (163)
Q Consensus 144 ~~~~~~p~~~i~I~~~~vl~ 163 (163)
++.+++|.++|+|.+|+|++
T Consensus 174 t~~~~~P~~~i~I~~~~vl~ 193 (232)
T 3bkp_A 174 VGKEDRPMTPPFIKSVDVLW 193 (232)
T ss_dssp BCGGGCBSSCCBEEEEEEEE
T ss_pred cCCCCCcCCCeEEEEEEEEc
Confidence 99899999999999999873
No 29
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=3.4e-52 Score=307.18 Aligned_cols=156 Identities=33% Similarity=0.585 Sum_probs=141.7
Q ss_pred CCCCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCCC
Q 031256 5 DDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIK 84 (163)
Q Consensus 5 ~~~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~ 84 (163)
++.+++|.|+|+.|+|+||||+++||+||+||++||+.+||+|+.||||+|+|++||||+...+. .+.++..+++|..
T Consensus 1 ~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~--~~~~g~~~~dE~~ 78 (166)
T 1v9t_A 1 AKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQ--QKKPNPPIKNEAD 78 (166)
T ss_dssp CCCSCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCC--BCCCCCCBCCCGG
T ss_pred CCCCeEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCC--CCCCCCccccccc
Confidence 35788999999999999999999999999999999999999999999999999999999985432 2345778899976
Q ss_pred CCCCCCcceEEEeeeC-CCCCCcccEEEEcCCCCCCCCC-----CcEEEEEEcCHHHHHHHhcCCCCC----CCCcccce
Q 031256 85 PELKHTGAGILSMANA-GPNTNGSQFFITLAPASHLDGK-----HTIFGRVCRGMEVIKRLGSVQTDK----DDRPIHDV 154 (163)
Q Consensus 85 ~~l~~~~~G~v~~~~~-~~~~~~sqFfI~l~~~~~ld~~-----~~vfG~Vi~G~~vl~~I~~~~~~~----~~~p~~~i 154 (163)
+.++|. +|+||||+. +|++++|||||++.++++||++ |+|||+|++|||||++|++.++++ .++|.++|
T Consensus 79 ~~l~~~-~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v 157 (166)
T 1v9t_A 79 NGLRNT-RGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPV 157 (166)
T ss_dssp GSCCCC-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCC
T ss_pred ccccCC-ceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCe
Confidence 677766 999999996 6999999999999999999998 999999999999999999999876 47899999
Q ss_pred EEEEEEEcC
Q 031256 155 KILRTSVKD 163 (163)
Q Consensus 155 ~I~~~~vl~ 163 (163)
+|.+|+|++
T Consensus 158 ~I~~~~v~~ 166 (166)
T 1v9t_A 158 VILSATVLP 166 (166)
T ss_dssp BEEEEEECC
T ss_pred EEEEEEEeC
Confidence 999999985
No 30
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=5.3e-52 Score=318.55 Aligned_cols=158 Identities=38% Similarity=0.702 Sum_probs=149.0
Q ss_pred CCCCCCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHhcC--------CcCCceEEEeecCceeecCCCC-CCCC
Q 031256 4 SDDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRRG--------YYNNSKFHRIIKDFIVQGGDPT-GTGR 69 (163)
Q Consensus 4 ~~~~~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~~~--------~y~g~~f~rv~~~~~iq~G~~~-~~~~ 69 (163)
..+.+++|+|+++ .|+|+||||++.||+||+||++||+++ ||+|+.||||+|+|+|||||+. +++.
T Consensus 55 ~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~ 134 (229)
T 1z81_A 55 TNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGS 134 (229)
T ss_dssp SSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSC
T ss_pred cCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCC
Confidence 3456889999987 899999999999999999999999987 7999999999999999999986 7888
Q ss_pred CCCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEE--cCHHHHHHHhcCCCCCC
Q 031256 70 GGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVC--RGMEVIKRLGSVQTDKD 147 (163)
Q Consensus 70 ~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi--~G~~vl~~I~~~~~~~~ 147 (163)
++.++|+..|++| .+.++|.++|+||||+.+|++++|||||++.++++||++|+|||||+ +||+||++|++.+++++
T Consensus 135 Gg~siyg~~f~dE-~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~ 213 (229)
T 1z81_A 135 GSLSIYGEKFDDE-NFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPY 213 (229)
T ss_dssp CCCBTTBSCCCCC-CCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTT
T ss_pred CCCccCCCccccc-ccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCC
Confidence 8999999999999 47899999999999999999999999999999999999999999999 99999999999999887
Q ss_pred -CCcccceEEEEEEEc
Q 031256 148 -DRPIHDVKILRTSVK 162 (163)
Q Consensus 148 -~~p~~~i~I~~~~vl 162 (163)
++|.++|+|.+|++|
T Consensus 214 ~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 214 IYKPKIPINVVECGEL 229 (229)
T ss_dssp TCCBSSCEEEEEEEEC
T ss_pred CCCCCCCeEEEeCeeC
Confidence 999999999999986
No 31
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=7.1e-52 Score=305.86 Aligned_cols=153 Identities=28% Similarity=0.485 Sum_probs=140.8
Q ss_pred CCCEEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCCCCC
Q 031256 7 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPE 86 (163)
Q Consensus 7 ~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~ 86 (163)
+.+.|.|+|+.|+|+||||+++||+||+||++||+.+||+|+.||||+|+|++||||+.... +.+.++..+++|..+.
T Consensus 2 p~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--~~~~~~~~~~~E~~~~ 79 (167)
T 3s6m_A 2 PGSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGL--KQKPTDAPIANEANNG 79 (167)
T ss_dssp CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTT--EECCCCCCBCCCGGGC
T ss_pred CCcEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCC--CCCCCCCccCCccccc
Confidence 56799999999999999999999999999999999999999999999999999999987543 2344577888887778
Q ss_pred CCCCcceEEEeee-CCCCCCcccEEEEcCCCCCCCCC--------CcEEEEEEcCHHHHHHHhcCCCCC----CCCcccc
Q 031256 87 LKHTGAGILSMAN-AGPNTNGSQFFITLAPASHLDGK--------HTIFGRVCRGMEVIKRLGSVQTDK----DDRPIHD 153 (163)
Q Consensus 87 l~~~~~G~v~~~~-~~~~~~~sqFfI~l~~~~~ld~~--------~~vfG~Vi~G~~vl~~I~~~~~~~----~~~p~~~ 153 (163)
++|. +|+||||+ .+|++++|||||++.++++||++ |+|||+|++|||||++|+++++++ +++|.++
T Consensus 80 l~~~-~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~ 158 (167)
T 3s6m_A 80 LKND-TYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDD 158 (167)
T ss_dssp CCCC-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSC
T ss_pred ccCC-ccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCC
Confidence 8885 99999999 68999999999999999999998 999999999999999999999987 6899999
Q ss_pred eEEEEEEEc
Q 031256 154 VKILRTSVK 162 (163)
Q Consensus 154 i~I~~~~vl 162 (163)
|+|.+|.||
T Consensus 159 v~I~~~~il 167 (167)
T 3s6m_A 159 VVIEKAVVV 167 (167)
T ss_dssp CEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999986
No 32
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=4.7e-52 Score=305.88 Aligned_cols=151 Identities=31% Similarity=0.559 Sum_probs=139.6
Q ss_pred EEEEEecceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 031256 10 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPELKH 89 (163)
Q Consensus 10 ~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~ 89 (163)
+|.|+|+.|+|+||||+++||+||+||++||+.+||+|+.||||+|+|++||||+... .+.++++..+++|..+.++|
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~--~g~~~~g~~~~dE~~~~l~~ 78 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPG--MKQKATKEPIKNEANNGLKN 78 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETT--TEECCCCCCBCCCCCSSCCC
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccC--CCcCCCCCcccccccccccc
Confidence 4899999999999999999999999999999999999999999999999999998732 24567888999998777888
Q ss_pred CcceEEEeee-CCCCCCcccEEEEcCCCCCCCCC--------CcEEEEEEcCHHHHHHHhcCCCCC----CCCcccceEE
Q 031256 90 TGAGILSMAN-AGPNTNGSQFFITLAPASHLDGK--------HTIFGRVCRGMEVIKRLGSVQTDK----DDRPIHDVKI 156 (163)
Q Consensus 90 ~~~G~v~~~~-~~~~~~~sqFfI~l~~~~~ld~~--------~~vfG~Vi~G~~vl~~I~~~~~~~----~~~p~~~i~I 156 (163)
. +|+||||+ .+|++++|||||++.++++||++ |+|||+|++|||||++|++.+++. +++|.++|+|
T Consensus 79 ~-~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I 157 (164)
T 1lop_A 79 T-RGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVII 157 (164)
T ss_dssp C-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEE
T ss_pred C-ccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEE
Confidence 6 99999997 58999999999999999999998 999999999999999999999865 5899999999
Q ss_pred EEEEEcC
Q 031256 157 LRTSVKD 163 (163)
Q Consensus 157 ~~~~vl~ 163 (163)
.+|+|++
T Consensus 158 ~~~~v~~ 164 (164)
T 1lop_A 158 ESVTVSE 164 (164)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999986
No 33
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=5.3e-51 Score=314.68 Aligned_cols=158 Identities=23% Similarity=0.431 Sum_probs=142.6
Q ss_pred CCCCCCCEEEEE-----ecceEEEEEEcCCCChHHHHHHHHHHhc-----------------C--C-cCCceEEEeecCc
Q 031256 3 ASDDGPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSRR-----------------G--Y-YNNSKFHRIIKDF 57 (163)
Q Consensus 3 ~~~~~~~~v~~~-----ts~G~i~ieL~~~~aP~~~~nF~~l~~~-----------------~--~-y~g~~f~rv~~~~ 57 (163)
..+..+++|+|+ |+.|+|+||||++.||+||+||++||++ + | |+|+.||||+|+|
T Consensus 9 p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~F 88 (234)
T 2ose_A 9 PNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNN 88 (234)
T ss_dssp CCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTT
T ss_pred CcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCC
Confidence 445678899999 8999999999999999999999999984 4 7 9999999999999
Q ss_pred eeecCC-CCCCCCCCCCCCCCc-----CCCCCCCCCCCCcceEEEeee----CCCCCCcccEEEEcCC------CCCCCC
Q 031256 58 IVQGGD-PTGTGRGGDSIYGHV-----FEDEIKPELKHTGAGILSMAN----AGPNTNGSQFFITLAP------ASHLDG 121 (163)
Q Consensus 58 ~iq~G~-~~~~~~~~~~~~~~~-----~~~e~~~~l~~~~~G~v~~~~----~~~~~~~sqFfI~l~~------~~~ld~ 121 (163)
+||||| +.+++.++.++|+.. |+ ++.++|.++|+||||+ .++++++|||||++.+ .+|||+
T Consensus 89 miQgGd~~~g~G~Gg~siyg~~~~p~~f~---~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg 165 (234)
T 2ose_A 89 YIVSGDIYNSNGSSAGTVYCDEPIPPVFG---DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDR 165 (234)
T ss_dssp EEEECCCC----CCCCCTTTTCCBCCCCC---SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCT
T ss_pred EEEcCCccCCCCCCCccccCCccCccccc---CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCC
Confidence 999999 468888999999887 55 3579998899999999 9999999999999999 999999
Q ss_pred CCcEEEEEEcCHHHHHHHhcCCCCCCCCcccceEEEEEEEcC
Q 031256 122 KHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 163 (163)
Q Consensus 122 ~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p~~~i~I~~~~vl~ 163 (163)
+|+|||+|++|||||++|++++++.+++|.++|+|.+|++++
T Consensus 166 ~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~ 207 (234)
T 2ose_A 166 DQVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYL 207 (234)
T ss_dssp TSEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECC
T ss_pred CeeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEec
Confidence 999999999999999999999999889999999999999974
No 34
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=8.3e-52 Score=306.38 Aligned_cols=147 Identities=48% Similarity=0.797 Sum_probs=111.3
Q ss_pred ecceEEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceEEEeecCceeecCC-CCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 031256 15 TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGD-PTGTGRGGDSIYGHVFEDEIKPELKHT 90 (163)
Q Consensus 15 ts~G~i~ieL~~~~aP~~~~nF~~l~~--~~~-y~g~~f~rv~~~~~iq~G~-~~~~~~~~~~~~~~~~~~e~~~~l~~~ 90 (163)
|++|+|+||||++.||++|+||++||+ .++ |+|+.||||+|+|++|||| +.+++.++.++|+..+++| ++.++|.
T Consensus 19 T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~~~h~ 97 (172)
T 2c3b_A 19 TKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADE-NFSRKHD 97 (172)
T ss_dssp CEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-----------------------CHHHH
T ss_pred cccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCc-ccccccC
Confidence 455999999999999999999999999 678 9999999999999999999 6688888999999999999 6788999
Q ss_pred cceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEc--CHHHHHHHhcCCCCCCC-CcccceEEEEEEEc
Q 031256 91 GAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCR--GMEVIKRLGSVQTDKDD-RPIHDVKILRTSVK 162 (163)
Q Consensus 91 ~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~--G~~vl~~I~~~~~~~~~-~p~~~i~I~~~~vl 162 (163)
++|+||||+.+|++++|||||++.++++||++|+|||+|++ ||+||++|++.+++..+ +|.++|+|.+|++|
T Consensus 98 ~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 98 KKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp HTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEEEEEC
T ss_pred CCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEeCeeC
Confidence 99999999999999999999999999999999999999999 99999999999987655 99999999999986
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1.2e-48 Score=319.76 Aligned_cols=153 Identities=46% Similarity=0.788 Sum_probs=146.4
Q ss_pred CCEEEEEec-----ceEEEEEEcCCCChHHHHHHHHHHhc--------C---CcCCceEEEeecCceeecCCCC-CCCCC
Q 031256 8 PPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRR--------G---YYNNSKFHRIIKDFIVQGGDPT-GTGRG 70 (163)
Q Consensus 8 ~~~v~~~ts-----~G~i~ieL~~~~aP~~~~nF~~l~~~--------~---~y~g~~f~rv~~~~~iq~G~~~-~~~~~ 70 (163)
+++|+|+|+ .|+|+||||++.||+||+||++||++ | ||+|+.||||+|+|+|||||+. ++|++
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 899999998 89999999999999999999999987 5 7999999999999999999998 88999
Q ss_pred CCCCCCCcCCCCCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCc
Q 031256 71 GDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRP 150 (163)
Q Consensus 71 ~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~~p 150 (163)
+.++|+..|++| ...++|.++|+|+|++.+|++++|||||++.+.++||++|+|||+|++||+||++|+..+++. ++|
T Consensus 95 ~~~~~~~~~~~e-~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P 172 (370)
T 1ihg_A 95 GESIYGEKFEDE-NFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKP 172 (370)
T ss_dssp CCBTTBSCBCCC-CCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEE
T ss_pred CCCCCCCCcCCC-cCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Ccc
Confidence 999999999999 468899999999999999999999999999999999999999999999999999999999876 899
Q ss_pred ccceEEEEEEEc
Q 031256 151 IHDVKILRTSVK 162 (163)
Q Consensus 151 ~~~i~I~~~~vl 162 (163)
..+|+|.+|+++
T Consensus 173 ~~~v~I~~~g~l 184 (370)
T 1ihg_A 173 AKLCVIAECGEL 184 (370)
T ss_dssp SSCEEEEEEEEE
T ss_pred ceeEEEEEEEEe
Confidence 999999999987
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=2.9e-42 Score=279.63 Aligned_cols=136 Identities=27% Similarity=0.474 Sum_probs=120.7
Q ss_pred CCCCEEEEEec--------ceEEEEEEcCCCChHHHHHHHHHHhcCCcCCceEEEeecCceeecCCCCCCCCC-------
Q 031256 6 DGPPEVTLETS--------MGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRG------- 70 (163)
Q Consensus 6 ~~~~~v~~~ts--------~G~i~ieL~~~~aP~~~~nF~~l~~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~------- 70 (163)
.....|.|+|+ .|+|+|+||++.||+||+||++||+.+||+|+.|||| |+|++||||+.+++.+
T Consensus 168 ~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g 246 (369)
T 3rfy_A 168 KGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTE 246 (369)
T ss_dssp CSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCC
T ss_pred CCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccCcccC
Confidence 34677889997 8999999999999999999999999999999999999 9999999999877655
Q ss_pred --------------CCCCCCCcCCCCC----CCCCCCCcceEEEeeeC--CCCCCcccEEEEc-------CCCCCCCCCC
Q 031256 71 --------------GDSIYGHVFEDEI----KPELKHTGAGILSMANA--GPNTNGSQFFITL-------APASHLDGKH 123 (163)
Q Consensus 71 --------------~~~~~~~~~~~e~----~~~l~~~~~G~v~~~~~--~~~~~~sqFfI~l-------~~~~~ld~~~ 123 (163)
+.++|+..+++|. .+.++|+.+|+||||++ ++|+++|||||++ .+.++||++|
T Consensus 247 ~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgky 326 (369)
T 3rfy_A 247 KTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRY 326 (369)
T ss_dssp CCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCE
T ss_pred cCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCe
Confidence 3456666666652 35788888999999997 8999999999999 4789999999
Q ss_pred cEEEEEEcCHHHHHHHhcC
Q 031256 124 TIFGRVCRGMEVIKRLGSV 142 (163)
Q Consensus 124 ~vfG~Vi~G~~vl~~I~~~ 142 (163)
+|||+|++|||||++|++.
T Consensus 327 tVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 327 AVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp EEEEEEEESTTGGGGCCTT
T ss_pred eEEEEEecCHHHHHHHhCC
Confidence 9999999999999999873
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=96.89 E-value=0.0033 Score=44.88 Aligned_cols=104 Identities=17% Similarity=0.269 Sum_probs=65.0
Q ss_pred CCCEEEEEecceEEEEEEcCCCChHHHHHHHHHH--hcC--CcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCC-
Q 031256 7 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELS--RRG--YYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFED- 81 (163)
Q Consensus 7 ~~~~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~--~~~--~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~- 81 (163)
...++.|...-..++++|+.+.||+||+.|+++. +.. -|.+-.++ -.| ..++.
T Consensus 28 ~~~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~~g~E~y~-~lp---------------------~~l~~~ 85 (153)
T 2nnz_A 28 VEMRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYF-TTQ---------------------VAVEKE 85 (153)
T ss_dssp SCCCEEEEETTEEEEECCCTTSCHHHHHHHHHTCSEEEEEEEETTEEEE-CCS---------------------CCCCCS
T ss_pred CCeEEEEEECCEEEEEEEcCCCCHHHHHHHHHhCCcEEEHHhhCCcEEE-ECC---------------------CCCCCC
Confidence 3566888888889999999999999999999986 111 12211111 111 01111
Q ss_pred CCCCCCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCC------CCCcEEEEEEcCHHHHHHH
Q 031256 82 EIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLD------GKHTIFGRVCRGMEVIKRL 139 (163)
Q Consensus 82 e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld------~~~~vfG~Vi~G~~vl~~I 139 (163)
| +.. .....|-|++-..+.+ +.|-.++.|... ..-.+||+|.+|++.|.++
T Consensus 86 e-n~~-~~~~~GDI~Yy~pg~~-----LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 86 E-NSK-DVVELGDVAYWIPGKA-----ICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp S-CCB-CCCCTTEEEEETTTTE-----EEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred C-CCc-ccCCCCeEEEeCCCCE-----EEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 2 122 2334788888765543 777777764322 2246899999998777665
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=95.58 E-value=0.25 Score=35.91 Aligned_cols=111 Identities=11% Similarity=0.140 Sum_probs=64.0
Q ss_pred CEEEEEecce--EEEEEEcCCCChHHHHHHHHHH--hcC----CcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCC
Q 031256 9 PEVTLETSMG--SFTVELYYKHSPRTCRNFAELS--RRG----YYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFE 80 (163)
Q Consensus 9 ~~v~~~ts~G--~i~ieL~~~~aP~~~~nF~~l~--~~~----~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~ 80 (163)
..+.++...+ .++.+|..+.||+||+.|.++. ++. .|.|..++--.|.+-. ...+
T Consensus 22 r~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~LP~~~~viHarwSGeeVy~~lp~f~~-----------------~~~g 84 (188)
T 3kop_A 22 RYINITLEKRGVTCKALLLDDVAPRTSKAVWDALPQSSQVFHGKYARNEIYNLVPAFAP-----------------KEPG 84 (188)
T ss_dssp CEEEEEETTTTEEEEEEECTTTSHHHHHHHHHHCCEEEECEECSSSSSEEEEEEECCSS-----------------SCCC
T ss_pred eEEEEEEecCCeEEEEEEccccChHHHHHHHHhCCCCcceEEEEEecceEEEECCcccc-----------------cCCC
Confidence 4555665554 4789999999999999999976 221 2566655554454321 1123
Q ss_pred CCCCCCCCCCcceEEEee---e---C----C--------CCCCcccEEEEcCCC--------CCCCCCCcEEEEEEcCHH
Q 031256 81 DEIKPELKHTGAGILSMA---N---A----G--------PNTNGSQFFITLAPA--------SHLDGKHTIFGRVCRGME 134 (163)
Q Consensus 81 ~e~~~~l~~~~~G~v~~~---~---~----~--------~~~~~sqFfI~l~~~--------~~ld~~~~vfG~Vi~G~~ 134 (163)
.|+. -.+..+|-|++- . . | ..+...++.|-.+.+ .|+-+ .+|++|++|.|
T Consensus 85 ~EN~--T~~P~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpG--N~F~TIveGle 160 (188)
T 3kop_A 85 AENT--TVTPIPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPG--NVFATIVEGLD 160 (188)
T ss_dssp SCSE--ESSCCTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCE--EEEEEEEESHH
T ss_pred cCCC--CCCCCCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecC--cEEEEEecCHH
Confidence 3422 233446777763 1 1 1 011123555554433 34444 46999999999
Q ss_pred HHHHHh
Q 031256 135 VIKRLG 140 (163)
Q Consensus 135 vl~~I~ 140 (163)
-+.++.
T Consensus 161 ~la~~c 166 (188)
T 3kop_A 161 EMAAAC 166 (188)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887663
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=94.77 E-value=0.26 Score=34.30 Aligned_cols=100 Identities=13% Similarity=0.162 Sum_probs=60.3
Q ss_pred EEEEEecceEEEEEEcCCCChHHHHHHHHHH----hcCCcCCceEEEeecCceeecCCCCCCCCCCCCCCCCcCCCCCCC
Q 031256 10 EVTLETSMGSFTVELYYKHSPRTCRNFAELS----RRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKP 85 (163)
Q Consensus 10 ~v~~~ts~G~i~ieL~~~~aP~~~~nF~~l~----~~~~y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~ 85 (163)
+|.+-.....+..+|+. .|.|++.|.++. +-..|. ..++--.|-. ++.+.++
T Consensus 14 ~~~~~~~~~~v~a~L~D--np~Ta~~~~~~LPl~~~~~~~g-~E~y~~~p~~---------------------l~~~e~~ 69 (136)
T 1zx8_A 14 RVELLFESGKCVIDLNE--EYEVVKLLKEKIPFESVVNTWG-EEIYFSTPVN---------------------VQKMENP 69 (136)
T ss_dssp EEEEECSSCEEEEEEET--TSHHHHHHHHHCSEEEECEESS-SEEEEECSCC---------------------CCCCSSE
T ss_pred EEEEeeCCcEEEEEEcC--CHHHHHHHHHHCCcEEEHHHhC-CcEEEECCcc---------------------CCCCCCC
Confidence 44555566789999975 488999999986 222243 3333222311 1111012
Q ss_pred CCCCCcceEEEeeeCCCCCCcccEEEEcCCCCCCCC------CCcEEEEEEcCHHHHHHH
Q 031256 86 ELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDG------KHTIFGRVCRGMEVIKRL 139 (163)
Q Consensus 86 ~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~------~~~vfG~Vi~G~~vl~~I 139 (163)
... ...|-|++-..+.+ |.|-.++.|...+ .-.+||||.+|++.+.++
T Consensus 70 ~~~-~~~GDIaYw~pgg~-----LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 70 REV-VEIGDVGYWPPGKA-----LCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp ESS-BCTTEEEEEGGGTE-----EEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred Ccc-CCCCcEEEeCCCCE-----EEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 222 24788888776555 7777777653332 367899999997777655
No 40
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=52.91 E-value=3.5 Score=19.39 Aligned_cols=15 Identities=33% Similarity=0.791 Sum_probs=12.7
Q ss_pred HHHHHHHhcCCcCCc
Q 031256 34 RNFAELSRRGYYNNS 48 (163)
Q Consensus 34 ~nF~~l~~~~~y~g~ 48 (163)
.||.+-.+.+||+|-
T Consensus 4 knfwsslrkgfydge 18 (26)
T 2khf_A 4 KNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHTTTH
T ss_pred HHHHHHHHhhcccch
Confidence 588888899999984
No 41
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=35.53 E-value=20 Score=28.98 Aligned_cols=50 Identities=16% Similarity=0.286 Sum_probs=40.5
Q ss_pred CcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEc-CHHHHHHHh
Q 031256 90 TGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCR-GMEVIKRLG 140 (163)
Q Consensus 90 ~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~-G~~vl~~I~ 140 (163)
..+|.|.+.+.......-+.-|++.+.|. |++.-|+|+|.+ -+.+|+-|.
T Consensus 326 r~rGdItIdN~~ygRY~GElQI~l~dlp~-d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 326 QERGQVVIGNNSFGKYKGELQIILKEMPI-DERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEECSCBCC-CTTEEEEEEECGGGGGGGGGCC
T ss_pred ccCCcEEEeCCCccccccEeeEEcccCCC-CCCeeEEEEECHHHHHHHHhcC
Confidence 45899999987665566789999998774 788889999996 677888775
No 42
>3bbd_A Ribosome biogenesis protein NEP1-like; methyltransferase, S-adenosyl-methionin adenosyl-homocysteine, rRNA processing; HET: MSE SAH; 2.15A {Methanocaldococcus jannaschii} SCOP: c.116.1.6 PDB: 3bbe_A 3bbh_A*
Probab=33.83 E-value=41 Score=24.71 Aligned_cols=47 Identities=9% Similarity=0.152 Sum_probs=33.7
Q ss_pred CEEEEEecceEEEEEEcCC-CChHHHHHHHHHHhcCCcCC-ceEEEeecC
Q 031256 9 PEVTLETSMGSFTVELYYK-HSPRTCRNFAELSRRGYYNN-SKFHRIIKD 56 (163)
Q Consensus 9 ~~v~~~ts~G~i~ieL~~~-~aP~~~~nF~~l~~~~~y~g-~~f~rv~~~ 56 (163)
=+|+++|..|. +|++.+. -.|++-.+|..|-..=+.++ ...-+++++
T Consensus 76 L~VYIhT~~~~-lI~V~P~~RiPRty~rF~gLM~qLL~~~~~~Llkvik~ 124 (205)
T 3bbd_A 76 LNIYIHTYDDK-VLKINPETRLPRNYFRFLGVMEKVLKGERNHLIKMEEK 124 (205)
T ss_dssp EEEEEEETTSE-EEEECTTCCCCSSHHHHHHHHHHHHTTCCCSSEEEEEC
T ss_pred eEEEEEecCCE-EEEECCCCCCCCCHHHHHHHHHHHHHhCchhheEEEcC
Confidence 37999988776 7899887 69999999998875433333 345555553
No 43
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=32.62 E-value=20 Score=28.88 Aligned_cols=50 Identities=14% Similarity=0.178 Sum_probs=40.8
Q ss_pred CcceEEEeeeCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEc-CHHHHHHHh
Q 031256 90 TGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCR-GMEVIKRLG 140 (163)
Q Consensus 90 ~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~-G~~vl~~I~ 140 (163)
..+|.|.+.+.......-+.-|++.+.| -|++.-|+|+|.+ -+.+|+-|.
T Consensus 300 r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 300 RPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCC
T ss_pred ccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcC
Confidence 4589999998766556668999999887 4788889999996 677888775
No 44
>3oii_A Essential for mitotic growth 1; EMG1, scnep1, spout, ribosome biogenesis, methyltransferase, processing, ribosomal protein; HET: SAH; 1.85A {Saccharomyces cerevisiae} PDB: 3oij_A* 3oin_A* 2v3j_A 2v3k_A*
Probab=27.49 E-value=51 Score=25.03 Aligned_cols=33 Identities=30% Similarity=0.417 Sum_probs=27.4
Q ss_pred CEEEEEecceEEEEEEcCC-CChHHHHHHHHHHhc
Q 031256 9 PEVTLETSMGSFTVELYYK-HSPRTCRNFAELSRR 42 (163)
Q Consensus 9 ~~v~~~ts~G~i~ieL~~~-~aP~~~~nF~~l~~~ 42 (163)
=+||++|..|. +|++.+. -.|++-.+|..|-..
T Consensus 111 L~VYIhT~~~~-lIeV~P~~RiPRty~rF~GLM~q 144 (253)
T 3oii_A 111 LQVYIQTSRGI-LIEVNPTVRIPRTFKRFSGLMVQ 144 (253)
T ss_dssp EEEEEEETTSC-EEEECTTCCCCSSHHHHHHHHHH
T ss_pred eEEEEEecCCE-EEEECCCCCCCCCHHHHHHHHHH
Confidence 47999988776 6899887 699999999988743
No 45
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=24.72 E-value=49 Score=15.77 Aligned_cols=12 Identities=58% Similarity=0.794 Sum_probs=8.4
Q ss_pred CcccEEEEcCCC
Q 031256 105 NGSQFFITLAPA 116 (163)
Q Consensus 105 ~~sqFfI~l~~~ 116 (163)
-.|-.||||.+-
T Consensus 9 ~aSSvFITLapp 20 (26)
T 2k9u_B 9 VASSVFITLAPP 20 (26)
T ss_dssp CEEEEEEEECCS
T ss_pred eeeeEEEEecCc
Confidence 355689999853
No 46
>3o7b_A Ribosome biogenesis NEP1 RNA methyltransferase; spout, rRNA processi transferase; HET: TYR SAH; 1.45A {Archaeoglobus fulgidus}
Probab=22.52 E-value=73 Score=24.05 Aligned_cols=47 Identities=17% Similarity=0.206 Sum_probs=33.2
Q ss_pred CEEEEEecceEEEEEEcCC-CChHHHHHHHHHHhcCCc------CCceEEEeecC
Q 031256 9 PEVTLETSMGSFTVELYYK-HSPRTCRNFAELSRRGYY------NNSKFHRIIKD 56 (163)
Q Consensus 9 ~~v~~~ts~G~i~ieL~~~-~aP~~~~nF~~l~~~~~y------~g~~f~rv~~~ 56 (163)
=+|+++|..|. +|++.++ -.|++-.+|..|-..=+. ++...-+++++
T Consensus 105 L~VYIHT~~~~-lI~V~P~~RiPRty~RF~GLM~qLL~k~~I~~~~~~LLkvik~ 158 (244)
T 3o7b_A 105 FEVYVHTLNGE-IIWVNRETRLPRNYNRFVGLMEKLFEERRITAGDTTLIEFKDV 158 (244)
T ss_dssp EEEEEEETTSC-EEEECTTCCCCSSHHHHHHHHHHHHHHSEEEETTEEEEEEESS
T ss_pred eEEEEEecCCE-EEEECCCCCCCCCHHHHHHHHHHHHhhCcCCCCCCeeEEEEcC
Confidence 36899988776 7899887 699999999988743221 34455555543
No 47
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=21.64 E-value=1.7e+02 Score=18.75 Aligned_cols=36 Identities=22% Similarity=0.446 Sum_probs=26.8
Q ss_pred EEEEEEcCCCChHH---HHHHHHHHhcCCcCCceEEEeecC
Q 031256 19 SFTVELYYKHSPRT---CRNFAELSRRGYYNNSKFHRIIKD 56 (163)
Q Consensus 19 ~i~ieL~~~~aP~~---~~nF~~l~~~~~y~g~~f~rv~~~ 56 (163)
.+++.+|+.|||.. ...|.+|++. |.+..|.+|--+
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~--~~~v~f~kvd~d 63 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARK--FPETKFVKAIVN 63 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHH--CTTSEEEEEEGG
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHH--CCCCEEEEEEhH
Confidence 68999999999843 2356677765 778899988543
Done!