Query 031257
Match_columns 163
No_of_seqs 107 out of 1426
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 18:25:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031257.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031257hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p5q_A Glutathione peroxidase 100.0 6.3E-35 2.2E-39 201.9 15.9 162 1-162 1-162 (170)
2 2v1m_A Glutathione peroxidase; 100.0 6.8E-34 2.3E-38 196.5 17.3 157 5-162 4-161 (169)
3 2gs3_A PHGPX, GPX-4, phospholi 100.0 1.1E-33 3.6E-38 199.2 18.1 157 5-162 22-180 (185)
4 3dwv_A Glutathione peroxidase- 100.0 8.8E-35 3E-39 205.1 11.8 159 4-162 18-177 (187)
5 2obi_A PHGPX, GPX-4, phospholi 100.0 2.3E-33 7.9E-38 197.0 18.4 159 4-163 19-179 (183)
6 2i3y_A Epididymal secretory gl 100.0 2E-33 6.8E-38 202.1 16.2 155 7-162 30-205 (215)
7 2f8a_A Glutathione peroxidase 100.0 2.9E-33 1E-37 200.5 16.8 156 7-162 21-201 (208)
8 3kij_A Probable glutathione pe 100.0 4.2E-33 1.5E-37 195.2 16.6 151 6-162 12-164 (180)
9 2r37_A Glutathione peroxidase 100.0 1E-32 3.5E-37 197.4 16.4 155 7-162 12-187 (207)
10 2p31_A CL683, glutathione pero 100.0 2E-32 6.7E-37 192.0 15.3 154 4-162 21-175 (181)
11 2vup_A Glutathione peroxidase- 100.0 1.6E-32 5.5E-37 193.8 14.2 157 5-162 21-179 (190)
12 3cmi_A Peroxiredoxin HYR1; thi 100.0 4.8E-32 1.7E-36 188.2 12.8 154 7-162 7-162 (171)
13 4g2e_A Peroxiredoxin; redox pr 100.0 1.8E-31 6.3E-36 183.3 6.8 134 5-152 3-137 (157)
14 3eur_A Uncharacterized protein 100.0 1.6E-29 5.5E-34 170.3 12.3 133 4-161 3-138 (142)
15 3eyt_A Uncharacterized protein 100.0 6.8E-30 2.3E-34 174.7 10.2 142 7-162 1-146 (158)
16 4fo5_A Thioredoxin-like protei 100.0 8.1E-30 2.8E-34 171.9 9.3 128 3-152 4-132 (143)
17 4gqc_A Thiol peroxidase, perox 100.0 4.7E-31 1.6E-35 182.5 3.2 134 5-153 4-140 (164)
18 3drn_A Peroxiredoxin, bacterio 100.0 2.2E-29 7.6E-34 173.2 11.6 126 6-154 2-131 (161)
19 3lor_A Thiol-disulfide isomera 100.0 1.9E-29 6.6E-34 172.7 10.8 141 8-162 5-149 (160)
20 3gkn_A Bacterioferritin comigr 100.0 2.2E-29 7.6E-34 173.3 10.8 140 6-160 7-151 (163)
21 3fw2_A Thiol-disulfide oxidore 100.0 1.7E-28 5.8E-33 166.7 14.3 134 4-161 3-141 (150)
22 3ewl_A Uncharacterized conserv 100.0 4.2E-29 1.4E-33 167.9 10.9 131 7-162 2-135 (142)
23 3u5r_E Uncharacterized protein 100.0 5.9E-29 2E-33 179.2 11.9 131 4-151 30-161 (218)
24 3ixr_A Bacterioferritin comigr 100.0 1.9E-29 6.6E-34 176.6 8.2 142 4-160 19-167 (179)
25 3lwa_A Secreted thiol-disulfid 100.0 1.3E-28 4.4E-33 172.5 12.2 137 6-162 31-175 (183)
26 2f9s_A Thiol-disulfide oxidore 100.0 1.4E-28 4.9E-33 167.0 11.7 132 7-162 1-132 (151)
27 4hde_A SCO1/SENC family lipopr 100.0 5.2E-28 1.8E-32 168.1 13.4 142 6-154 6-154 (170)
28 3hcz_A Possible thiol-disulfid 100.0 2.5E-28 8.6E-33 164.7 11.3 135 3-159 2-137 (148)
29 2lrn_A Thiol:disulfide interch 100.0 4.3E-28 1.5E-32 165.0 12.4 125 6-151 3-127 (152)
30 2lrt_A Uncharacterized protein 100.0 4.3E-28 1.5E-32 165.4 12.4 133 5-160 8-140 (152)
31 1xzo_A BSSCO, hypothetical pro 100.0 3.9E-28 1.3E-32 168.4 11.9 148 4-161 5-165 (174)
32 3or5_A Thiol:disulfide interch 100.0 9.3E-28 3.2E-32 164.9 13.4 140 4-162 6-145 (165)
33 2cvb_A Probable thiol-disulfid 100.0 4.6E-28 1.6E-32 170.3 12.1 129 3-149 4-132 (188)
34 3gl3_A Putative thiol:disulfid 100.0 1.1E-27 3.8E-32 162.6 13.6 132 6-162 3-136 (152)
35 3fkf_A Thiol-disulfide oxidore 100.0 2E-27 6.9E-32 160.3 13.8 127 4-151 3-132 (148)
36 2ywi_A Hypothetical conserved 100.0 3.7E-28 1.3E-32 171.7 10.5 142 4-162 16-168 (196)
37 1xvw_A Hypothetical protein RV 100.0 1E-27 3.5E-32 164.4 12.4 131 5-156 8-144 (160)
38 1uul_A Tryparedoxin peroxidase 100.0 6.1E-28 2.1E-32 171.9 11.1 136 1-155 1-148 (202)
39 3kcm_A Thioredoxin family prot 100.0 2.1E-27 7.1E-32 161.6 13.3 133 6-161 2-136 (154)
40 2c0d_A Thioredoxin peroxidase 100.0 3.9E-28 1.3E-32 175.3 9.9 128 6-153 25-165 (221)
41 1we0_A Alkyl hydroperoxide red 100.0 1.4E-27 4.9E-32 167.9 12.4 137 6-161 1-150 (187)
42 3raz_A Thioredoxin-related pro 100.0 1.3E-27 4.4E-32 162.5 11.6 129 12-162 3-134 (151)
43 3erw_A Sporulation thiol-disul 99.9 1.4E-27 4.7E-32 160.5 11.5 137 5-163 8-144 (145)
44 2l5o_A Putative thioredoxin; s 99.9 1.7E-27 5.7E-32 161.9 12.0 133 7-162 3-135 (153)
45 1n8j_A AHPC, alkyl hydroperoxi 99.9 5.3E-28 1.8E-32 170.3 9.7 129 7-154 2-138 (186)
46 1jfu_A Thiol:disulfide interch 99.9 2.3E-27 7.8E-32 166.4 12.7 138 5-161 33-173 (186)
47 2lja_A Putative thiol-disulfid 99.9 4.2E-27 1.4E-31 159.7 13.0 135 6-163 3-138 (152)
48 3kh7_A Thiol:disulfide interch 99.9 3.4E-27 1.2E-31 164.7 12.9 132 5-163 29-162 (176)
49 1q98_A Thiol peroxidase, TPX; 99.9 1.9E-27 6.4E-32 164.3 11.3 130 5-152 16-148 (165)
50 1psq_A Probable thiol peroxida 99.9 2.4E-27 8.1E-32 163.5 11.7 128 5-153 15-145 (163)
51 2yzh_A Probable thiol peroxida 99.9 2.2E-27 7.5E-32 164.8 11.5 129 5-152 20-151 (171)
52 2pn8_A Peroxiredoxin-4; thiore 99.9 5.2E-28 1.8E-32 173.5 8.2 132 4-154 17-159 (211)
53 2bmx_A Alkyl hydroperoxidase C 99.9 3E-27 1E-31 167.4 11.9 130 5-154 3-152 (195)
54 3p7x_A Probable thiol peroxida 99.9 1.3E-27 4.3E-32 165.3 9.5 126 5-152 19-147 (166)
55 1zof_A Alkyl hydroperoxide-red 99.9 1.6E-27 5.6E-32 169.1 9.6 126 6-154 1-143 (198)
56 1zye_A Thioredoxin-dependent p 99.9 5.1E-27 1.8E-31 169.3 11.7 135 2-155 23-168 (220)
57 2ggt_A SCO1 protein homolog, m 99.9 4.8E-27 1.6E-31 161.3 10.8 137 11-162 2-155 (164)
58 3mng_A Peroxiredoxin-5, mitoch 99.9 4.2E-27 1.4E-31 163.9 10.6 133 4-154 13-157 (173)
59 2rli_A SCO2 protein homolog, m 99.9 7.2E-27 2.5E-31 161.5 11.7 137 13-162 7-158 (171)
60 2i81_A 2-Cys peroxiredoxin; st 99.9 2E-27 6.7E-32 170.7 9.2 130 5-154 20-162 (213)
61 3me7_A Putative uncharacterize 99.9 1.2E-26 3.9E-31 161.2 12.6 150 6-162 1-156 (170)
62 1tp9_A Peroxiredoxin, PRX D (t 99.9 4.1E-27 1.4E-31 162.2 9.7 132 6-153 4-146 (162)
63 3zrd_A Thiol peroxidase; oxido 99.9 6.2E-27 2.1E-31 166.7 10.9 131 5-153 51-184 (200)
64 2a4v_A Peroxiredoxin DOT5; yea 99.9 2.4E-27 8.3E-32 162.6 8.3 132 4-156 5-139 (159)
65 1qmv_A Human thioredoxin perox 99.9 6.5E-27 2.2E-31 165.9 10.7 133 4-155 3-146 (197)
66 3ztl_A Thioredoxin peroxidase; 99.9 6.5E-27 2.2E-31 169.0 10.7 133 5-156 39-182 (222)
67 2h01_A 2-Cys peroxiredoxin; th 99.9 5.6E-27 1.9E-31 165.6 10.1 128 7-154 1-141 (192)
68 3qpm_A Peroxiredoxin; oxidored 99.9 5.2E-27 1.8E-31 171.4 10.1 133 4-155 46-189 (240)
69 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 8.3E-27 2.8E-31 161.6 10.5 132 6-154 3-143 (167)
70 2b5x_A YKUV protein, TRXY; thi 99.9 5.7E-27 2E-31 157.9 9.4 137 6-162 1-139 (148)
71 1xvq_A Thiol peroxidase; thior 99.9 1.3E-26 4.6E-31 161.5 11.4 130 4-152 16-147 (175)
72 3tjj_A Peroxiredoxin-4; thiore 99.9 8.9E-27 3E-31 171.3 10.4 132 4-154 60-202 (254)
73 3hdc_A Thioredoxin family prot 99.9 1.5E-26 5.3E-31 158.3 10.4 128 3-157 12-139 (158)
74 4evm_A Thioredoxin family prot 99.9 5.3E-26 1.8E-30 150.9 12.2 132 11-162 1-133 (138)
75 1zzo_A RV1677; thioredoxin fol 99.9 4.1E-26 1.4E-30 151.5 11.5 128 8-162 1-129 (136)
76 1lu4_A Soluble secreted antige 99.9 3.5E-26 1.2E-30 152.1 11.1 126 10-162 2-130 (136)
77 2b7k_A SCO1 protein; metalloch 99.9 3.3E-26 1.1E-30 162.7 11.5 147 6-161 13-172 (200)
78 3ha9_A Uncharacterized thiored 99.9 1.1E-26 3.6E-31 160.0 8.6 135 6-162 11-158 (165)
79 2hyx_A Protein DIPZ; thioredox 99.9 1E-26 3.4E-31 178.0 9.1 140 4-162 49-193 (352)
80 1prx_A HORF6; peroxiredoxin, h 99.9 2.5E-26 8.6E-31 166.1 10.6 132 5-153 4-150 (224)
81 3uma_A Hypothetical peroxiredo 99.9 1.3E-26 4.4E-31 163.0 8.2 133 6-153 26-167 (184)
82 3ia1_A THIO-disulfide isomeras 99.9 1.7E-26 5.8E-31 157.1 8.6 136 5-163 4-139 (154)
83 2ls5_A Uncharacterized protein 99.9 3.5E-28 1.2E-32 166.5 0.0 136 4-162 5-142 (159)
84 3tue_A Tryparedoxin peroxidase 99.9 3.7E-26 1.2E-30 163.6 10.0 132 1-150 21-163 (219)
85 2jsy_A Probable thiol peroxida 99.9 2E-26 6.9E-31 159.1 7.8 128 5-153 17-147 (167)
86 2b1k_A Thiol:disulfide interch 99.9 1.5E-25 5.1E-30 154.7 11.9 132 5-163 21-155 (168)
87 2k6v_A Putative cytochrome C o 99.9 1E-26 3.5E-31 160.8 5.9 144 7-162 11-167 (172)
88 2v2g_A Peroxiredoxin 6; oxidor 99.9 3.1E-26 1.1E-30 166.4 8.4 132 6-153 3-146 (233)
89 3sbc_A Peroxiredoxin TSA1; alp 99.9 5.5E-26 1.9E-30 162.4 9.0 127 6-151 23-160 (216)
90 1xcc_A 1-Cys peroxiredoxin; un 99.9 6.3E-26 2.2E-30 163.6 8.2 131 6-152 3-146 (220)
91 3keb_A Probable thiol peroxida 99.9 6.1E-25 2.1E-29 158.0 13.0 128 4-152 20-155 (224)
92 2h30_A Thioredoxin, peptide me 99.9 5.9E-26 2E-30 155.8 6.4 128 16-162 22-150 (164)
93 1nm3_A Protein HI0572; hybrid, 99.9 1.6E-25 5.6E-30 163.3 9.1 134 6-155 3-145 (241)
94 1kng_A Thiol:disulfide interch 99.9 1.7E-25 5.9E-30 152.2 8.5 132 4-162 6-146 (156)
95 2pwj_A Mitochondrial peroxired 99.9 1.9E-25 6.4E-30 155.3 8.7 133 7-154 8-155 (171)
96 3a2v_A Probable peroxiredoxin; 99.9 4.3E-25 1.5E-29 161.6 8.8 132 5-154 4-144 (249)
97 1i5g_A Tryparedoxin II; electr 99.9 8.3E-25 2.8E-29 147.4 6.5 120 8-151 3-127 (144)
98 4eo3_A Bacterioferritin comigr 99.9 5.6E-24 1.9E-28 161.2 10.4 128 10-162 2-130 (322)
99 3s9f_A Tryparedoxin; thioredox 99.9 6E-25 2E-29 151.8 3.9 122 7-152 23-148 (165)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.9 2.9E-24 1E-28 145.0 6.2 120 8-152 4-128 (146)
101 1o73_A Tryparedoxin; electron 99.9 6E-24 2E-28 142.9 5.6 121 7-152 3-128 (144)
102 2lus_A Thioredoxion; CR-Trp16, 99.8 4.6E-25 1.6E-29 148.0 0.0 121 10-152 2-127 (143)
103 4f82_A Thioredoxin reductase; 99.9 1.7E-22 5.6E-27 140.4 7.6 134 4-153 8-158 (176)
104 2xhf_A Peroxiredoxin 5; oxidor 99.8 2.1E-21 7.2E-26 134.5 8.0 133 5-153 13-152 (171)
105 1xiy_A Peroxiredoxin, pfaop; a 99.8 2.3E-21 7.8E-26 135.7 5.7 131 6-152 1-153 (182)
106 2fwh_A Thiol:disulfide interch 99.7 3.7E-19 1.3E-23 118.6 2.0 113 6-162 4-122 (134)
107 2l57_A Uncharacterized protein 99.7 2.2E-17 7.5E-22 108.5 7.3 106 10-162 4-111 (126)
108 3hxs_A Thioredoxin, TRXP; elec 99.7 1.9E-16 6.5E-21 105.9 7.6 98 17-162 36-133 (141)
109 3ul3_B Thioredoxin, thioredoxi 99.7 1.6E-16 5.5E-21 104.8 7.1 104 9-162 21-124 (128)
110 2ju5_A Thioredoxin disulfide i 99.7 6.1E-17 2.1E-21 110.3 4.3 106 19-161 34-145 (154)
111 3p2a_A Thioredoxin 2, putative 99.6 5.1E-15 1.7E-19 99.8 6.2 106 9-162 32-137 (148)
112 3f9u_A Putative exported cytoc 99.5 1.7E-16 5.9E-21 109.7 -2.0 115 27-162 42-160 (172)
113 1z6n_A Hypothetical protein PA 99.5 2.7E-15 9.2E-20 103.6 3.8 46 27-74 49-94 (167)
114 3fk8_A Disulphide isomerase; A 99.5 5.6E-15 1.9E-19 97.8 4.8 91 30-161 27-126 (133)
115 2voc_A Thioredoxin; electron t 99.5 9.9E-15 3.4E-19 93.9 5.6 84 31-162 16-99 (112)
116 3zzx_A Thioredoxin; oxidoreduc 99.5 1.2E-14 4.2E-19 92.8 6.0 85 28-162 16-100 (105)
117 3qfa_C Thioredoxin; protein-pr 99.5 1.2E-14 4.1E-19 94.2 4.7 84 29-162 28-111 (116)
118 2dj0_A Thioredoxin-related tra 99.5 7.1E-14 2.4E-18 93.0 8.6 93 30-163 24-116 (137)
119 2kuc_A Putative disulphide-iso 99.5 1.1E-14 3.6E-19 95.9 4.3 94 24-162 19-115 (130)
120 1nsw_A Thioredoxin, TRX; therm 99.5 2.3E-14 7.8E-19 90.8 5.5 85 31-163 16-100 (105)
121 2l5l_A Thioredoxin; structural 99.5 3.5E-14 1.2E-18 94.4 6.0 84 31-162 37-120 (136)
122 2dml_A Protein disulfide-isome 99.5 1.5E-13 5.1E-18 90.3 9.0 85 31-162 34-118 (130)
123 2djj_A PDI, protein disulfide- 99.5 5.7E-14 2E-18 91.2 6.5 98 16-162 8-111 (121)
124 3gix_A Thioredoxin-like protei 99.5 1.9E-14 6.6E-19 97.4 4.0 43 31-74 22-64 (149)
125 3die_A Thioredoxin, TRX; elect 99.5 6E-14 2E-18 88.8 6.0 84 31-162 18-101 (106)
126 3tco_A Thioredoxin (TRXA-1); d 99.5 3.5E-14 1.2E-18 90.3 4.9 94 21-162 10-103 (109)
127 2pu9_C TRX-F, thioredoxin F-ty 99.5 7.5E-14 2.6E-18 89.4 6.4 84 30-162 22-105 (111)
128 2trx_A Thioredoxin; electron t 99.5 7.7E-14 2.6E-18 88.7 6.4 84 31-162 19-102 (108)
129 3f3q_A Thioredoxin-1; His TAG, 99.5 7.1E-14 2.4E-18 89.5 6.0 82 31-162 23-104 (109)
130 2vlu_A Thioredoxin, thioredoxi 99.5 1.4E-14 4.9E-19 94.2 2.8 110 3-162 3-114 (122)
131 3qou_A Protein YBBN; thioredox 99.5 6.9E-14 2.4E-18 103.8 6.7 84 30-161 24-107 (287)
132 4euy_A Uncharacterized protein 99.5 9.4E-14 3.2E-18 88.2 6.3 83 31-162 17-99 (105)
133 1t00_A Thioredoxin, TRX; redox 99.5 1.3E-13 4.6E-18 88.2 7.1 85 31-163 22-106 (112)
134 1dby_A Chloroplast thioredoxin 99.5 1.6E-13 5.4E-18 87.1 7.3 84 31-162 18-101 (107)
135 1thx_A Thioredoxin, thioredoxi 99.5 2.2E-13 7.7E-18 87.3 7.7 96 19-162 11-107 (115)
136 3cxg_A Putative thioredoxin; m 99.4 1.7E-14 5.7E-19 95.8 2.0 87 26-162 34-123 (133)
137 1w4v_A Thioredoxin, mitochondr 99.4 1.3E-13 4.6E-18 89.5 6.3 84 31-162 30-113 (119)
138 2dj3_A Protein disulfide-isome 99.4 2.4E-13 8.4E-18 89.6 7.5 62 13-74 5-68 (133)
139 2lst_A Thioredoxin; structural 99.2 7.3E-15 2.5E-19 96.8 0.0 97 22-163 9-111 (130)
140 3d6i_A Monothiol glutaredoxin- 99.4 2.4E-13 8.4E-18 87.0 7.1 84 31-162 20-103 (112)
141 2o8v_B Thioredoxin 1; disulfid 99.4 2.5E-13 8.6E-18 89.5 7.2 84 31-162 39-122 (128)
142 1x5d_A Protein disulfide-isome 99.4 1.9E-13 6.6E-18 90.0 6.5 85 31-162 24-111 (133)
143 1x5e_A Thioredoxin domain cont 99.4 1.7E-13 6E-18 89.7 6.2 83 31-162 22-104 (126)
144 2i4a_A Thioredoxin; acidophIle 99.4 2.3E-13 8E-18 86.2 6.6 84 31-162 19-102 (107)
145 1xfl_A Thioredoxin H1; AT3G510 99.4 2.5E-13 8.7E-18 89.0 6.6 82 31-162 37-118 (124)
146 2ppt_A Thioredoxin-2; thiredox 99.4 5.5E-14 1.9E-18 95.7 3.5 84 31-162 63-146 (155)
147 1zma_A Bacterocin transport ac 99.4 2.7E-13 9.1E-18 87.8 6.4 88 31-162 28-115 (118)
148 2dj1_A Protein disulfide-isome 99.4 1.8E-13 6.2E-18 91.0 5.7 98 17-162 19-118 (140)
149 3d22_A TRXH4, thioredoxin H-ty 99.4 6.2E-14 2.1E-18 93.3 3.4 83 30-162 44-126 (139)
150 2e0q_A Thioredoxin; electron t 99.4 1.3E-13 4.5E-18 86.7 4.7 83 31-162 15-97 (104)
151 3m9j_A Thioredoxin; oxidoreduc 99.4 1.8E-13 6.2E-18 86.5 5.3 84 29-162 17-100 (105)
152 2yzu_A Thioredoxin; redox prot 99.4 1.7E-13 5.7E-18 87.0 5.0 84 31-162 17-100 (109)
153 3hz4_A Thioredoxin; NYSGXRC, P 99.4 9.5E-14 3.2E-18 92.8 3.9 84 31-162 23-106 (140)
154 2oe3_A Thioredoxin-3; electron 99.4 2.3E-13 8E-18 87.8 5.5 82 31-162 29-110 (114)
155 1fb6_A Thioredoxin M; electron 99.4 2E-13 6.9E-18 86.2 5.1 96 19-162 4-100 (105)
156 1ep7_A Thioredoxin CH1, H-type 99.4 4E-13 1.4E-17 85.9 6.5 82 32-162 24-105 (112)
157 2l6c_A Thioredoxin; oxidoreduc 99.4 3E-13 1E-17 86.7 5.8 83 31-162 18-100 (110)
158 2j23_A Thioredoxin; immune pro 99.4 2.4E-13 8.3E-18 88.6 5.2 84 31-162 32-115 (121)
159 3apq_A DNAJ homolog subfamily 99.4 6.2E-14 2.1E-18 99.9 2.4 97 18-162 100-196 (210)
160 3gnj_A Thioredoxin domain prot 99.4 4.8E-13 1.7E-17 85.3 6.4 84 31-162 21-104 (111)
161 1faa_A Thioredoxin F; electron 99.4 4.1E-13 1.4E-17 87.6 6.1 84 30-162 35-118 (124)
162 1sen_A Thioredoxin-like protei 99.4 7.1E-16 2.4E-20 106.1 -7.7 60 13-74 28-87 (164)
163 1ti3_A Thioredoxin H, PTTRXH1; 99.4 1.5E-12 5.2E-17 83.2 8.2 82 31-162 25-106 (113)
164 2f51_A Thioredoxin; electron t 99.4 8.3E-14 2.8E-18 90.5 2.0 96 18-162 6-107 (118)
165 1xwb_A Thioredoxin; dimerizati 99.4 6.7E-13 2.3E-17 83.9 5.7 85 29-162 17-101 (106)
166 2xc2_A Thioredoxinn; oxidoredu 99.4 3.6E-13 1.2E-17 87.0 4.4 85 27-162 28-112 (117)
167 3emx_A Thioredoxin; structural 99.4 5.4E-13 1.9E-17 88.6 5.2 90 31-162 31-120 (135)
168 2vim_A Thioredoxin, TRX; thior 99.4 8.4E-13 2.9E-17 83.1 5.7 83 30-162 17-99 (104)
169 2i1u_A Thioredoxin, TRX, MPT46 99.4 1.7E-12 5.9E-17 84.0 7.2 85 31-163 29-113 (121)
170 3uvt_A Thioredoxin domain-cont 99.4 1E-12 3.6E-17 83.6 6.0 85 31-162 20-106 (111)
171 2wz9_A Glutaredoxin-3; protein 99.4 8.9E-13 3E-17 89.4 6.0 81 31-161 31-111 (153)
172 1r26_A Thioredoxin; redox-acti 99.4 8.6E-13 3E-17 86.6 5.7 82 31-162 36-117 (125)
173 1syr_A Thioredoxin; SGPP, stru 99.4 1.2E-12 4.1E-17 84.0 5.9 82 31-162 25-106 (112)
174 1gh2_A Thioredoxin-like protei 99.4 9.4E-13 3.2E-17 83.7 5.3 42 31-74 20-61 (107)
175 1v98_A Thioredoxin; oxidoreduc 99.3 2.4E-12 8.1E-17 85.8 7.0 96 19-162 37-132 (140)
176 3h79_A Thioredoxin-like protei 99.3 9.7E-13 3.3E-17 86.3 5.0 100 17-162 17-122 (127)
177 3dxb_A Thioredoxin N-terminall 99.3 5.1E-13 1.7E-17 96.0 3.3 84 31-162 29-112 (222)
178 2qsi_A Putative hydrogenase ex 99.3 5.3E-12 1.8E-16 83.8 7.8 82 33-162 34-117 (137)
179 2dbc_A PDCL2, unnamed protein 99.3 2.3E-12 7.7E-17 85.7 5.9 42 31-74 29-70 (135)
180 2vm1_A Thioredoxin, thioredoxi 99.3 2.7E-12 9.4E-17 82.6 5.7 82 31-162 27-108 (118)
181 1qgv_A Spliceosomal protein U5 99.3 5.2E-12 1.8E-16 84.7 7.2 43 31-74 22-64 (142)
182 2yj7_A LPBCA thioredoxin; oxid 99.0 1.8E-13 6.1E-18 86.3 0.0 98 18-163 4-102 (106)
183 1oaz_A Thioredoxin 1; immune s 99.3 2.8E-12 9.5E-17 83.9 5.5 84 31-162 20-117 (123)
184 2av4_A Thioredoxin-like protei 99.3 1.2E-12 4.3E-17 88.5 3.5 43 31-74 40-82 (160)
185 2qgv_A Hydrogenase-1 operon pr 99.3 7.2E-12 2.5E-16 83.5 6.7 85 31-162 33-119 (140)
186 1mek_A Protein disulfide isome 99.3 1.2E-12 4.2E-17 84.3 2.8 85 31-162 23-111 (120)
187 3idv_A Protein disulfide-isome 99.3 3.5E-12 1.2E-16 92.0 5.0 58 17-74 17-76 (241)
188 3aps_A DNAJ homolog subfamily 99.3 1.6E-12 5.5E-17 84.4 2.4 43 31-74 20-62 (122)
189 3ira_A Conserved protein; meth 99.2 1.1E-12 3.7E-17 90.8 1.3 95 16-149 23-120 (173)
190 1fo5_A Thioredoxin; disulfide 99.2 5.7E-11 1.9E-15 72.0 8.1 41 33-74 3-43 (85)
191 3ph9_A Anterior gradient prote 99.2 1.5E-12 5.1E-17 88.3 0.9 76 31-153 43-120 (151)
192 1nho_A Probable thioredoxin; b 99.2 1.4E-11 4.6E-16 74.8 4.4 40 34-74 3-42 (85)
193 3evi_A Phosducin-like protein 99.2 3E-11 1E-15 78.5 6.2 41 32-74 23-63 (118)
194 1wmj_A Thioredoxin H-type; str 99.2 2.8E-12 9.4E-17 84.1 1.1 42 31-74 35-76 (130)
195 3t58_A Sulfhydryl oxidase 1; o 99.2 2.4E-11 8.3E-16 97.3 5.5 102 17-162 14-121 (519)
196 3iv4_A Putative oxidoreductase 99.2 9.3E-11 3.2E-15 75.0 7.1 87 32-163 24-111 (112)
197 1a8l_A Protein disulfide oxido 99.2 8E-11 2.7E-15 84.2 7.5 84 32-162 134-220 (226)
198 2es7_A Q8ZP25_salty, putative 99.2 5E-11 1.7E-15 79.9 5.8 82 32-162 34-119 (142)
199 3q6o_A Sulfhydryl oxidase 1; p 99.1 7.1E-11 2.4E-15 85.7 6.3 44 31-74 29-74 (244)
200 1ilo_A Conserved hypothetical 99.1 7.7E-10 2.6E-14 65.7 8.5 37 35-72 2-38 (77)
201 1a0r_P Phosducin, MEKA, PP33; 99.1 3.5E-10 1.2E-14 82.3 8.1 41 31-73 132-172 (245)
202 3f8u_A Protein disulfide-isome 99.1 6.8E-11 2.3E-15 93.6 4.6 85 31-162 369-455 (481)
203 3ed3_A Protein disulfide-isome 99.1 2E-10 6.8E-15 86.0 6.7 43 31-74 34-76 (298)
204 3kp8_A Vkorc1/thioredoxin doma 99.1 1.3E-12 4.5E-17 83.4 -4.7 40 23-62 3-42 (106)
205 2hls_A Protein disulfide oxido 99.1 3.6E-10 1.2E-14 82.2 7.6 46 29-74 135-183 (243)
206 2trc_P Phosducin, MEKA, PP33; 99.0 2.6E-10 8.9E-15 81.7 6.1 41 31-73 119-159 (217)
207 1wou_A Thioredoxin -related pr 99.0 1.2E-10 4E-15 75.9 3.7 46 28-74 20-72 (123)
208 1sji_A Calsequestrin 2, calseq 99.0 7.8E-10 2.7E-14 84.3 8.1 43 31-74 27-76 (350)
209 3idv_A Protein disulfide-isome 99.0 3.4E-10 1.2E-14 81.5 5.4 84 31-162 146-231 (241)
210 3dml_A Putative uncharacterize 99.0 8.7E-11 3E-15 75.9 1.5 87 31-162 17-104 (116)
211 3uem_A Protein disulfide-isome 99.0 7.4E-10 2.5E-14 84.6 6.8 84 31-162 266-351 (361)
212 2r2j_A Thioredoxin domain-cont 99.0 3.2E-10 1.1E-14 87.5 4.7 57 18-74 8-69 (382)
213 2b5e_A Protein disulfide-isome 99.0 8.6E-10 2.9E-14 87.9 6.1 44 31-74 30-73 (504)
214 3f8u_A Protein disulfide-isome 98.9 1.1E-09 3.8E-14 86.6 5.8 82 32-161 21-102 (481)
215 3apo_A DNAJ homolog subfamily 98.9 1.8E-09 6.1E-14 90.2 6.5 46 28-74 451-496 (780)
216 2b5e_A Protein disulfide-isome 98.9 7.7E-10 2.6E-14 88.1 3.8 43 31-73 375-419 (504)
217 3qcp_A QSOX from trypanosoma b 98.9 1.2E-09 4.1E-14 86.1 4.1 44 31-74 41-91 (470)
218 2ywm_A Glutaredoxin-like prote 98.9 3.6E-09 1.2E-13 75.8 6.0 41 32-74 136-176 (229)
219 2dlx_A UBX domain-containing p 98.8 1E-08 3.5E-13 69.4 7.7 82 31-161 41-129 (153)
220 3gyk_A 27KDA outer membrane pr 98.8 3.9E-09 1.3E-13 72.6 3.9 51 21-73 11-61 (175)
221 3apo_A DNAJ homolog subfamily 98.7 2.2E-09 7.6E-14 89.6 2.1 43 31-74 674-716 (780)
222 1eej_A Thiol:disulfide interch 98.7 3.1E-08 1E-12 70.7 6.1 43 27-73 81-123 (216)
223 3hd5_A Thiol:disulfide interch 98.7 2.7E-08 9.3E-13 69.6 5.3 43 31-74 24-66 (195)
224 3us3_A Calsequestrin-1; calciu 98.7 1E-07 3.4E-12 73.2 8.8 44 31-74 29-78 (367)
225 2e7p_A Glutaredoxin; thioredox 98.6 6.1E-09 2.1E-13 66.8 1.4 37 31-73 18-54 (116)
226 4h86_A Peroxiredoxin type-2; o 98.6 1.1E-07 3.9E-12 66.5 7.8 131 5-152 25-180 (199)
227 3ga4_A Dolichyl-diphosphooligo 98.6 2.4E-07 8E-12 64.2 7.9 43 31-74 36-90 (178)
228 3h93_A Thiol:disulfide interch 98.5 5E-08 1.7E-12 68.1 3.3 43 31-74 24-66 (192)
229 2djk_A PDI, protein disulfide- 98.5 1.5E-07 5.1E-12 61.9 5.4 42 31-74 22-63 (133)
230 1a8l_A Protein disulfide oxido 98.4 9E-07 3.1E-11 62.9 8.0 44 29-74 19-63 (226)
231 2znm_A Thiol:disulfide interch 98.4 2.6E-07 8.8E-12 64.5 4.5 42 31-73 21-62 (195)
232 1ttz_A Conserved hypothetical 98.4 2.2E-07 7.7E-12 56.8 3.2 33 36-74 3-35 (87)
233 1v58_A Thiol:disulfide interch 98.4 6.4E-07 2.2E-11 64.9 6.1 45 27-74 92-136 (241)
234 2fgx_A Putative thioredoxin; N 98.3 5.2E-07 1.8E-11 57.3 4.6 38 34-74 30-67 (107)
235 1hyu_A AHPF, alkyl hydroperoxi 98.3 1.3E-06 4.5E-11 69.9 7.6 42 31-74 116-157 (521)
236 2ywm_A Glutaredoxin-like prote 98.3 1.5E-06 5.1E-11 62.0 6.9 45 30-74 19-68 (229)
237 1z6m_A Conserved hypothetical 98.3 4.8E-06 1.6E-10 57.0 8.8 49 25-74 20-70 (175)
238 1t3b_A Thiol:disulfide interch 98.2 7.5E-07 2.6E-11 63.2 3.8 39 31-73 85-123 (211)
239 2rem_A Disulfide oxidoreductas 98.2 1.3E-06 4.6E-11 60.6 4.0 42 31-73 24-65 (193)
240 2k8s_A Thioredoxin; dimer, str 98.1 2.2E-06 7.6E-11 51.1 3.3 37 35-74 3-39 (80)
241 1ego_A Glutaredoxin; electron 98.1 1.6E-06 5.6E-11 52.1 2.6 37 36-74 3-39 (85)
242 2qc7_A ERP31, ERP28, endoplasm 98.0 7.2E-06 2.5E-10 59.4 5.7 40 31-74 21-63 (240)
243 2c0g_A ERP29 homolog, windbeut 97.9 1.9E-05 6.4E-10 57.5 6.4 40 31-74 32-75 (248)
244 3kp9_A Vkorc1/thioredoxin doma 97.9 2.8E-06 9.7E-11 63.1 1.1 38 24-61 189-226 (291)
245 1un2_A DSBA, thiol-disulfide i 97.8 2.5E-06 8.6E-11 60.0 -0.1 53 21-74 100-157 (197)
246 3hz8_A Thiol:disulfide interch 97.8 1.8E-05 6.2E-10 55.2 3.7 43 31-74 23-65 (193)
247 3uem_A Protein disulfide-isome 97.7 7.5E-05 2.6E-09 56.7 6.8 41 33-74 136-176 (361)
248 1wjk_A C330018D20RIK protein; 97.6 1.7E-05 5.8E-10 49.5 1.7 49 21-74 3-52 (100)
249 2hls_A Protein disulfide oxido 97.5 0.00024 8.4E-09 51.2 6.6 43 32-74 25-73 (243)
250 1h75_A Glutaredoxin-like prote 97.5 0.00015 5.3E-09 42.8 4.4 32 36-74 3-34 (81)
251 3gv1_A Disulfide interchange p 97.5 0.00092 3.1E-08 44.6 8.4 41 27-73 9-49 (147)
252 3l9v_A Putative thiol-disulfid 97.3 4.9E-05 1.7E-09 52.8 0.7 43 31-74 13-58 (189)
253 1kte_A Thioltransferase; redox 97.2 0.00019 6.6E-09 44.6 2.9 26 35-60 13-38 (105)
254 2hze_A Glutaredoxin-1; thiored 97.1 0.0011 3.7E-08 42.0 5.8 34 34-74 19-55 (114)
255 1r7h_A NRDH-redoxin; thioredox 97.1 0.00062 2.1E-08 39.3 3.8 32 36-74 3-34 (75)
256 3feu_A Putative lipoprotein; a 97.0 0.00016 5.4E-09 50.1 0.8 40 32-74 22-61 (185)
257 3nzn_A Glutaredoxin; structura 97.0 0.00076 2.6E-08 41.9 3.9 24 34-57 22-45 (103)
258 2ec4_A FAS-associated factor 1 96.7 0.016 5.5E-07 39.8 9.3 102 29-162 52-162 (178)
259 2cq9_A GLRX2 protein, glutared 96.7 0.0038 1.3E-07 40.5 5.6 32 36-74 29-60 (130)
260 3c1r_A Glutaredoxin-1; oxidize 96.7 0.0022 7.5E-08 40.9 4.3 35 36-74 27-62 (118)
261 2klx_A Glutaredoxin; thioredox 96.6 0.01 3.5E-07 35.4 6.9 32 35-73 7-38 (89)
262 1fov_A Glutaredoxin 3, GRX3; a 96.6 0.0036 1.2E-07 36.6 4.6 32 36-74 3-34 (82)
263 3qmx_A Glutaredoxin A, glutare 96.6 0.0042 1.4E-07 38.4 5.0 35 33-74 15-49 (99)
264 3l9s_A Thiol:disulfide interch 96.5 0.00094 3.2E-08 46.4 1.6 44 30-74 19-65 (191)
265 2ht9_A Glutaredoxin-2; thiored 96.3 0.0048 1.7E-07 41.0 4.4 22 36-57 51-72 (146)
266 2khp_A Glutaredoxin; thioredox 96.3 0.0056 1.9E-07 36.8 4.4 32 36-74 8-39 (92)
267 2yan_A Glutaredoxin-3; oxidore 96.3 0.0075 2.6E-07 37.4 5.0 34 33-74 17-55 (105)
268 3c7m_A Thiol:disulfide interch 96.3 0.0043 1.5E-07 42.6 4.1 43 31-74 16-59 (195)
269 3rhb_A ATGRXC5, glutaredoxin-C 96.2 0.0053 1.8E-07 38.6 3.9 22 36-57 21-42 (113)
270 2lqo_A Putative glutaredoxin R 95.9 0.039 1.3E-06 33.6 6.8 32 36-74 6-37 (92)
271 4dvc_A Thiol:disulfide interch 95.9 0.0074 2.5E-07 40.8 3.7 52 21-73 8-61 (184)
272 1wik_A Thioredoxin-like protei 95.8 0.031 1.1E-06 34.8 6.2 35 33-74 15-53 (109)
273 4f9z_D Endoplasmic reticulum r 95.8 0.054 1.9E-06 38.2 8.1 40 34-74 133-172 (227)
274 3ctg_A Glutaredoxin-2; reduced 95.6 0.0051 1.7E-07 39.9 1.9 19 36-54 39-58 (129)
275 3h8q_A Thioredoxin reductase 3 95.5 0.021 7.1E-07 36.0 4.5 32 36-74 19-50 (114)
276 1z3e_A Regulatory protein SPX; 95.4 0.19 6.5E-06 32.5 9.0 53 36-100 3-55 (132)
277 3msz_A Glutaredoxin 1; alpha-b 95.1 0.014 4.9E-07 34.5 2.7 22 35-56 5-26 (89)
278 3tdg_A DSBG, putative uncharac 95.1 0.012 4.1E-07 43.2 2.6 39 31-72 146-184 (273)
279 3gha_A Disulfide bond formatio 94.7 0.058 2E-06 37.5 5.3 53 21-74 19-73 (202)
280 3gn3_A Putative protein-disulf 94.6 0.023 7.9E-07 39.0 3.0 43 31-74 13-56 (182)
281 2ct6_A SH3 domain-binding glut 94.3 0.16 5.5E-06 31.7 6.2 36 36-74 10-47 (111)
282 3ic4_A Glutaredoxin (GRX-1); s 94.2 0.012 4.1E-07 35.3 0.7 22 36-57 14-35 (92)
283 3gmf_A Protein-disulfide isome 94.2 0.12 4.2E-06 36.0 6.0 49 25-73 8-58 (205)
284 3l78_A Regulatory protein SPX; 94.1 0.32 1.1E-05 30.8 7.4 52 36-99 2-53 (120)
285 3l4n_A Monothiol glutaredoxin- 93.9 0.04 1.4E-06 35.6 2.9 58 36-102 16-74 (127)
286 3bci_A Disulfide bond protein 93.9 0.067 2.3E-06 36.3 4.1 44 31-74 10-55 (186)
287 1t1v_A SH3BGRL3, SH3 domain-bi 93.7 0.28 9.6E-06 29.3 6.3 36 36-74 4-41 (93)
288 3rdw_A Putative arsenate reduc 93.5 0.4 1.4E-05 30.5 7.1 50 36-97 7-56 (121)
289 3f4s_A Alpha-DSBA1, putative u 93.2 0.12 4.1E-06 36.7 4.5 50 25-74 32-83 (226)
290 2wci_A Glutaredoxin-4; redox-a 93.1 0.12 4E-06 33.8 4.1 34 34-74 36-73 (135)
291 1aba_A Glutaredoxin; electron 92.5 0.25 8.4E-06 29.1 4.7 32 36-74 2-37 (87)
292 3zyw_A Glutaredoxin-3; metal b 91.7 0.17 5.7E-06 31.7 3.4 37 31-74 14-54 (111)
293 3gx8_A Monothiol glutaredoxin- 90.9 0.87 3E-05 28.8 6.3 26 32-57 15-44 (121)
294 1s3c_A Arsenate reductase; ARS 90.6 0.54 1.9E-05 30.8 5.1 50 37-98 5-54 (141)
295 2wem_A Glutaredoxin-related pr 88.9 0.53 1.8E-05 29.8 4.0 35 33-74 20-59 (118)
296 1u6t_A SH3 domain-binding glut 88.9 1.8 6.2E-05 27.5 6.4 37 35-74 1-39 (121)
297 3ipz_A Monothiol glutaredoxin- 88.6 0.68 2.3E-05 28.6 4.3 37 31-74 16-56 (109)
298 3f0i_A Arsenate reductase; str 88.6 0.32 1.1E-05 30.8 2.8 51 36-98 6-56 (119)
299 3gkx_A Putative ARSC family re 88.3 2 6.9E-05 27.1 6.5 55 36-102 6-60 (120)
300 3fz4_A Putative arsenate reduc 86.6 0.97 3.3E-05 28.6 4.2 55 36-102 5-59 (120)
301 3us3_A Calsequestrin-1; calciu 85.7 1.5 5.2E-05 33.1 5.6 42 33-74 248-290 (367)
302 2l4c_A Endoplasmic reticulum r 83.3 3.5 0.00012 26.1 5.7 35 32-71 39-73 (124)
303 1rw1_A Conserved hypothetical 83.1 0.78 2.7E-05 28.7 2.5 49 36-96 2-50 (114)
304 2axo_A Hypothetical protein AT 82.6 11 0.00038 27.4 8.7 38 34-74 44-81 (270)
305 2jvx_A NF-kappa-B essential mo 81.0 0.15 5.1E-06 23.7 -1.1 21 43-63 5-25 (28)
306 1sji_A Calsequestrin 2, calseq 80.2 6.1 0.00021 29.3 6.9 41 33-73 246-287 (350)
307 2jad_A Yellow fluorescent prot 78.4 1 3.5E-05 34.3 2.1 16 36-51 263-278 (362)
308 2g2q_A Glutaredoxin-2; thiored 75.6 3.3 0.00011 26.1 3.5 36 33-73 2-37 (124)
309 2kok_A Arsenate reductase; bru 75.4 3 0.0001 26.1 3.4 49 36-96 7-55 (120)
310 2in3_A Hypothetical protein; D 75.0 2.9 0.0001 28.6 3.6 38 34-72 8-45 (216)
311 3kzq_A Putative uncharacterize 73.3 4.2 0.00014 27.8 4.1 37 35-72 4-40 (208)
312 1nm3_A Protein HI0572; hybrid, 69.5 1.9 6.5E-05 30.3 1.6 34 34-74 170-203 (241)
313 3q6o_A Sulfhydryl oxidase 1; p 67.2 17 0.00057 25.3 6.2 22 129-153 204-225 (244)
314 2v2f_A Penicillin binding prot 66.6 3.5 0.00012 18.2 1.7 15 136-150 6-20 (26)
315 3ghf_A Septum site-determining 64.7 11 0.00037 23.8 4.3 56 30-102 45-100 (120)
316 2wul_A Glutaredoxin related pr 63.3 9.5 0.00032 24.0 3.8 23 32-54 19-45 (118)
317 3mjh_B Early endosome antigen 61.1 1 3.5E-05 21.9 -0.8 18 44-61 8-25 (34)
318 1th5_A NIFU1; iron-sulfur clus 59.2 21 0.00071 20.4 4.4 42 21-63 23-66 (74)
319 3kzq_A Putative uncharacterize 58.8 5.4 0.00018 27.2 2.2 32 125-162 166-197 (208)
320 2x8g_A Thioredoxin glutathione 58.3 10 0.00036 30.4 4.1 22 35-56 19-40 (598)
321 3ga8_A HTH-type transcriptiona 53.2 14 0.00047 21.2 3.0 35 29-63 23-64 (78)
322 2imf_A HCCA isomerase, 2-hydro 52.9 8.5 0.00029 26.1 2.4 27 36-62 3-29 (203)
323 3gl5_A Putative DSBA oxidoredu 49.7 35 0.0012 23.9 5.3 41 32-72 1-42 (239)
324 2h8l_A Protein disulfide-isome 49.6 63 0.0022 22.5 7.8 42 32-73 129-176 (252)
325 3ktb_A Arsenical resistance op 48.4 45 0.0016 20.5 5.2 35 40-74 12-52 (106)
326 2i3d_A AGR_C_3351P, hypothetic 44.7 27 0.00092 23.8 4.1 65 8-74 17-88 (249)
327 2dkh_A 3-hydroxybenzoate hydro 43.6 72 0.0025 25.8 6.9 51 6-56 467-522 (639)
328 3kgk_A Arsenical resistance op 43.5 32 0.0011 21.3 3.7 26 49-74 24-49 (110)
329 3pe6_A Monoglyceride lipase; a 43.4 75 0.0026 21.6 6.4 59 11-74 15-78 (303)
330 1r4w_A Glutathione S-transfera 43.2 13 0.00044 25.7 2.1 35 34-71 6-40 (226)
331 1xhj_A Nitrogen fixation prote 41.7 53 0.0018 19.4 5.4 43 21-63 26-72 (88)
332 3vhs_A ATPase wrnip1; zinc fin 40.8 1.6 5.4E-05 19.5 -1.9 10 43-52 8-17 (29)
333 2in3_A Hypothetical protein; D 40.0 15 0.00052 24.9 2.1 30 129-162 175-204 (216)
334 4f9z_D Endoplasmic reticulum r 38.9 31 0.0011 23.7 3.6 28 31-61 26-53 (227)
335 3hju_A Monoglyceride lipase; a 38.9 1E+02 0.0034 21.8 6.7 57 13-74 35-96 (342)
336 3cwf_A Alkaline phosphatase sy 38.2 18 0.0006 22.2 2.0 15 136-150 50-64 (122)
337 1yd6_A UVRC; DNA binding prote 37.1 37 0.0013 20.5 3.2 23 130-152 11-34 (99)
338 1pn0_A Phenol 2-monooxygenase; 35.2 1.8E+02 0.0062 23.7 8.1 37 6-42 479-519 (665)
339 3fmw_A Oxygenase; mithramycin, 34.8 16 0.00053 29.4 1.6 36 6-41 445-482 (570)
340 2obb_A Hypothetical protein; s 34.8 63 0.0022 20.8 4.3 44 53-102 28-71 (142)
341 4ev1_A Anabena TIC22; TIC22 fo 34.8 1.2E+02 0.0041 21.7 6.1 59 10-74 12-86 (252)
342 3bid_A UPF0339 protein NMB1088 33.5 31 0.0011 19.1 2.3 24 136-159 14-37 (64)
343 3pdk_A Phosphoglucosamine muta 33.1 1.5E+02 0.0051 23.1 7.0 23 83-108 241-263 (469)
344 2r2j_A Thioredoxin domain-cont 31.9 70 0.0024 23.9 4.8 42 32-74 236-278 (382)
345 3i3w_A Phosphoglucosamine muta 31.1 1.8E+02 0.0062 22.4 7.1 12 136-147 244-255 (443)
346 3v67_A Sensor protein CPXA; PA 30.4 29 0.001 22.4 2.1 14 136-149 57-70 (138)
347 4gxt_A A conserved functionall 30.2 1.3E+02 0.0044 22.8 6.0 43 48-99 220-262 (385)
348 2h8l_A Protein disulfide-isome 29.4 1.3E+02 0.0045 20.8 5.7 29 32-63 24-52 (252)
349 2pr7_A Haloacid dehalogenase/e 27.4 1E+02 0.0035 18.3 4.4 39 34-73 4-42 (137)
350 5nul_A Flavodoxin; electron tr 26.2 51 0.0018 20.4 2.8 9 84-92 96-104 (138)
351 3hug_B Probable conserved memb 26.0 14 0.00049 22.9 0.0 22 42-63 52-73 (108)
352 4hi4_A Aerotaxis transducer AE 25.9 45 0.0015 19.7 2.4 14 136-149 17-30 (121)
353 3r0v_A Alpha/beta hydrolase fo 25.7 1.5E+02 0.005 19.6 5.9 52 17-74 7-58 (262)
354 1wqa_A Phospho-sugar mutase; a 24.7 1.4E+02 0.0047 23.1 5.4 24 82-108 222-245 (455)
355 2ijr_A Hypothetical protein AP 24.6 73 0.0025 23.3 3.4 38 21-58 208-245 (300)
356 2q1z_B Anti-sigma factor CHRR, 24.5 23 0.0008 24.1 0.9 21 42-62 33-53 (195)
357 3trd_A Alpha/beta hydrolase; c 24.2 1.5E+02 0.005 19.1 5.1 57 13-74 7-72 (208)
358 3pgv_A Haloacid dehalogenase-l 23.2 1.9E+02 0.0067 20.1 7.9 59 34-101 23-81 (285)
359 3b33_A Sensor protein; structu 22.5 66 0.0023 18.3 2.7 14 136-149 19-32 (115)
360 2qkp_A Uncharacterized protein 22.1 62 0.0021 20.6 2.6 17 136-152 31-47 (151)
361 3ec3_A Protein disulfide-isome 21.9 2E+02 0.0069 19.8 5.6 30 32-64 25-54 (250)
362 3hn9_A Lamin-B1; structural ge 21.6 72 0.0025 20.0 2.7 15 136-150 101-115 (123)
363 3bj5_A Protein disulfide-isome 20.8 1.7E+02 0.0058 18.5 7.8 27 46-73 46-72 (147)
364 3hb7_A Isochorismatase hydrola 20.3 1.8E+02 0.0063 19.5 4.8 39 34-72 10-59 (204)
365 3fg8_A Uncharacterized protein 20.1 79 0.0027 18.4 2.7 14 136-149 24-37 (118)
No 1
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=100.00 E-value=6.3e-35 Score=201.93 Aligned_cols=162 Identities=81% Similarity=1.319 Sum_probs=131.3
Q ss_pred CccccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCC
Q 031257 1 MTSQFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 1 m~~~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~ 80 (163)
|....++.|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|.+..++
T Consensus 1 ~~~~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (170)
T 2p5q_A 1 MATQTSKNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEE 80 (170)
T ss_dssp ---------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred CCCCcCCCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCC
Confidence 56677889999999999999999999999999999999999999999999999999999999889999999998666666
Q ss_pred CCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhh
Q 031257 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~ 160 (163)
.++.+.+++|++++++++||++.+.|.++......|.++....+|+++.++|++|++||||++|+|++++.|..+++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~ 160 (170)
T 2p5q_A 81 PGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLE 160 (170)
T ss_dssp CSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGH
T ss_pred CCCHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHH
Confidence 67889999998756899999985567777777667766543333333356888889999999999999999988887776
Q ss_pred hc
Q 031257 161 VI 162 (163)
Q Consensus 161 ~~ 162 (163)
+.
T Consensus 161 ~~ 162 (170)
T 2p5q_A 161 RD 162 (170)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 2
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=100.00 E-value=6.8e-34 Score=196.53 Aligned_cols=157 Identities=47% Similarity=0.826 Sum_probs=130.8
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCH
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~ 84 (163)
.++.|.++|+|++++.+|+++++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|++..++.++.
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 83 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAE 83 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred cccCCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCH
Confidence 37789999999999999999999999999999999999999999999999999999999899999999986655666788
Q ss_pred HHHHHHH-HhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 85 DQIADFV-CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+.+++|+ . +++++||++.+.|.++......|.++.....|..+..+.+.|++||||++|+|++++.|..+++++.+.
T Consensus 84 ~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 161 (169)
T 2v1m_A 84 AEIKKFVTE-KYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGD 161 (169)
T ss_dssp HHHHHHHHH-HHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHH
T ss_pred HHHHHHHHH-hcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHH
Confidence 9999994 6 899999998544777777666777765544444222355566999999999999999998888777654
No 3
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=199.16 Aligned_cols=157 Identities=47% Similarity=0.833 Sum_probs=132.8
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCH
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~ 84 (163)
.+..|.++|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++++++++.+++|++|++..++.++.
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~ 101 (185)
T 2gs3_A 22 SMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSN 101 (185)
T ss_dssp GGGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCH
T ss_pred hccCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCH
Confidence 46689999999999999999999999999999999999999999999999999999999899999999986655666788
Q ss_pred HHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCC--cccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 85 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW--GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+.+++|++ +++++||++.+.|.++......|.++....+ |..+..+.+.|++||||++|+|++++.|..+++++.+.
T Consensus 102 ~~~~~~~~-~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 180 (185)
T 2gs3_A 102 EEIKEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKD 180 (185)
T ss_dssp HHHHHHHH-HTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGG
T ss_pred HHHHHHHH-HcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHH
Confidence 99999997 8999999995557777776667776654433 33222455667999999999999999998888877764
No 4
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=100.00 E-value=8.8e-35 Score=205.05 Aligned_cols=159 Identities=49% Similarity=0.880 Sum_probs=136.8
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
..++.+.++|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.+++|++|++..++.++
T Consensus 18 ~~~~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~ 97 (187)
T 3dwv_A 18 KKMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGN 97 (187)
T ss_dssp --CTTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSB
T ss_pred hhhcCCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCC
Confidence 34778999999999999999999999999999999999999999999999999999999999999999999777777788
Q ss_pred HHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccC-CccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG-DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+++++|++++++++||++.+.|.++......|.++....++.++ ..+|+++++||||++|+|++++.|..+++++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~ 177 (187)
T 3dwv_A 98 EEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEK 177 (187)
T ss_dssp TTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHH
Confidence 999999987556999999966688888887888887765555533 3566666999999999999999998888777654
No 5
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=196.96 Aligned_cols=159 Identities=48% Similarity=0.848 Sum_probs=134.2
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
..++.|.++|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|++..++.++
T Consensus 19 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~ 98 (183)
T 2obi_A 19 DDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGS 98 (183)
T ss_dssp CCGGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred cCCcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCC
Confidence 34678999999999999999999999999999999999999999999999999999999989999999998766666678
Q ss_pred HHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCC--cccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhh
Q 031257 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW--GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEV 161 (163)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (163)
.+.+++|++ +++++||++.+.|.++......|.++....+ |..+..+.+.|++||||++|+|++++.|..+++++.+
T Consensus 99 ~~~~~~~~~-~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 177 (183)
T 2obi_A 99 NEEIKEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEK 177 (183)
T ss_dssp HHHHHHHHH-TTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHT
T ss_pred HHHHHHHHH-HcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHH
Confidence 999999997 8999999994447777776667777655443 4322235555699999999999999999888887776
Q ss_pred cC
Q 031257 162 IL 163 (163)
Q Consensus 162 ~l 163 (163)
.|
T Consensus 178 ~i 179 (183)
T 2obi_A 178 DL 179 (183)
T ss_dssp TS
T ss_pred HH
Confidence 54
No 6
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=202.14 Aligned_cols=155 Identities=39% Similarity=0.651 Sum_probs=129.8
Q ss_pred cCCCcccceEEecCC-CCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHH
Q 031257 7 QNPESIFDLSVKDAR-GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 7 ~~~~~~p~f~l~~~~-G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~ 85 (163)
....++|+|++++.+ |+.++|++++||++||+|||+||++|+ +++.|++++++|+++|+.||+|++|++..++.++.+
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~ 108 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNK 108 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHH
Confidence 346689999999999 999999999999999999999999999 999999999999999999999999988777777889
Q ss_pred HHHHHHH-----hhcCCccceeeeeecCCCcchhHHHHhHhCCCc---cc------------CCccccCeeEEEECCCCc
Q 031257 86 QIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG---IF------------GDDIQWNFAKFLVDKNGQ 145 (163)
Q Consensus 86 ~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~ip~~~~~~lid~~G~ 145 (163)
++++|++ .+++++||++.+.|.++....++|.++....++ .+ ...|+++|++||||++|+
T Consensus 109 ~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~ 188 (215)
T 2i3y_A 109 EILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGI 188 (215)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCe
Confidence 9999985 268999999966666777766777776543221 11 124667789999999999
Q ss_pred EEEEeCCCCCcchhhhc
Q 031257 146 VVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 146 i~~~~~g~~~~~~~~~~ 162 (163)
|++++.|..+++++.+.
T Consensus 189 vv~~~~g~~~~~~l~~~ 205 (215)
T 2i3y_A 189 PVMRWSHRATVSSVKTD 205 (215)
T ss_dssp EEEEECTTSCHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHH
Confidence 99999988887776654
No 7
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=100.00 E-value=2.9e-33 Score=200.51 Aligned_cols=156 Identities=37% Similarity=0.648 Sum_probs=130.2
Q ss_pred cCCCcccceEEecCC-CCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHH
Q 031257 7 QNPESIFDLSVKDAR-GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 7 ~~~~~~p~f~l~~~~-G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~ 85 (163)
..+.++|+|++.+.+ |+.+++++++||++||+||++|||+|+.++|.|++++++|+++++.|++|++|++..++.++.+
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~ 100 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNE 100 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHH
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHH
Confidence 467889999999999 9999999999999999999999999999999999999999998999999999876666667889
Q ss_pred HHHHHHH-----hhcCCccceeeeeecCCCcchhHHHHhHhCCCcc-------c------------CCccccCeeEEEEC
Q 031257 86 QIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI-------F------------GDDIQWNFAKFLVD 141 (163)
Q Consensus 86 ~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~------------~~~ip~~~~~~lid 141 (163)
.+++|++ .+++++||++.+.|.++....+.|.++....++. + ...+.+.|++||||
T Consensus 101 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID 180 (208)
T 2f8a_A 101 EILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVG 180 (208)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEEC
T ss_pred HHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEc
Confidence 9999986 3789999999666777776666777765433210 0 02366667999999
Q ss_pred CCCcEEEEeCCCCCcchhhhc
Q 031257 142 KNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 142 ~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++|+|++++.|..+++++.+.
T Consensus 181 ~~G~i~~~~~g~~~~~~l~~~ 201 (208)
T 2f8a_A 181 PDGVPLRRYSRRFQTIDIEPD 201 (208)
T ss_dssp TTSCEEEEECTTSCGGGGHHH
T ss_pred CCCcEEEEeCCCCCHHHHHHH
Confidence 999999999998888887654
No 8
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=100.00 E-value=4.2e-33 Score=195.21 Aligned_cols=151 Identities=38% Similarity=0.739 Sum_probs=128.7
Q ss_pred ccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHH
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~ 85 (163)
..+|.++|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.|++|++|++...+.++.+
T Consensus 12 ~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~ 91 (180)
T 3kij_A 12 KPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSK 91 (180)
T ss_dssp CCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHH
T ss_pred cCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999977777778999
Q ss_pred HHHHHHHhh-cCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccc-cCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 86 QIADFVCTR-FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQ-WNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 86 ~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip-~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+++|++ + ++++||++.+.|..+......|.++.... .++| |++++||||++|+|++++.|..+++++.+.
T Consensus 92 ~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-----~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 164 (180)
T 3kij_A 92 EVESFAR-KNYGVTFPIFHKIKILGSEGEPAFRFLVDSS-----KKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPD 164 (180)
T ss_dssp HHHHHHH-HHHCCCSCBBCCCCCSSTTCCHHHHHHHHHH-----TCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHH
T ss_pred HHHHHHH-HhcCCCCceeeeeeccCccccHHHHHHHhcC-----CCCccccceEEEECCCCCEEEEECCCCCHHHHHHH
Confidence 9999998 6 99999998655677766666666655432 2334 222399999999999999998888776653
No 9
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=197.45 Aligned_cols=155 Identities=38% Similarity=0.653 Sum_probs=127.1
Q ss_pred cCCCcccceEEecCC-CCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHH
Q 031257 7 QNPESIFDLSVKDAR-GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 7 ~~~~~~p~f~l~~~~-G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~ 85 (163)
....++|+|++++.+ |+.++|++++||++||+||++||++| .++|.|++++++|+++|+.||+|++|++..++.++.+
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 345689999999999 99999999999999999999999999 7999999999999999999999999987666667888
Q ss_pred HHHHHHH-----hhcCCccceeeeeecCCCcchhHHHHhHhCCCc---ccC------------CccccCeeEEEECCCCc
Q 031257 86 QIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG---IFG------------DDIQWNFAKFLVDKNGQ 145 (163)
Q Consensus 86 ~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~~------------~~ip~~~~~~lid~~G~ 145 (163)
++++|++ .+++++||++.+.|.++....+.|.++....++ .++ ..++|.|++||||++|+
T Consensus 91 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~ 170 (207)
T 2r37_A 91 EILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGI 170 (207)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCc
Confidence 9999985 268999999966666777766777776543221 111 24666779999999999
Q ss_pred EEEEeCCCCCcchhhhc
Q 031257 146 VVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 146 i~~~~~g~~~~~~~~~~ 162 (163)
|++++.|..+++++.+.
T Consensus 171 i~~~~~g~~~~~~l~~~ 187 (207)
T 2r37_A 171 PIMRWHHRTTVSNVKMD 187 (207)
T ss_dssp EEEEECTTSCHHHHHHH
T ss_pred EEEEECCCCCHHHHHHH
Confidence 99999988887776553
No 10
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=192.04 Aligned_cols=154 Identities=40% Similarity=0.733 Sum_probs=123.2
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
..++.|.++|+|++.+.+|+++++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|++..++.++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~ 100 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDS 100 (181)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred CcCCcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCC
Confidence 35778999999999999999999999999999999999999999999999999999999989999999998665555568
Q ss_pred HHHHHHHHHhh-cCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 84 NDQIADFVCTR-FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 84 ~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+.+++|++ + ++++||++.+.|.++......|.+.....+ ..+.+..++||||++|+|++++.|..+++++.+.
T Consensus 101 ~~~~~~~~~-~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P----~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 175 (181)
T 2p31_A 101 NKEIESFAR-RTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSG----KEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQ 175 (181)
T ss_dssp HHHHHHHHH-HHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHS----CCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHH
T ss_pred HHHHHHHHH-hhcCCCceeEeecccCCccchhhhhhhhhcCC----CccccceeEEEEcCCCCEEEEeCCCCCHHHHHHH
Confidence 899999997 6 899999995556666665555655433222 1122333799999999999999998888777654
No 11
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=1.6e-32 Score=193.84 Aligned_cols=157 Identities=49% Similarity=0.885 Sum_probs=130.4
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCH
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~ 84 (163)
.++.+.++|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.|++|++|++..++.++.
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~ 100 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNE 100 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCH
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCH
Confidence 46789999999999999999999999999999999999999999999999999999999899999999986655666788
Q ss_pred HHHHHHH-HhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCC-ccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 85 DQIADFV-CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGD-DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+.+++|+ . +++++||++.+.|.++.....+|.++....+|+.+. .+.+.|++||||++|+|++++.|..+++++.+.
T Consensus 101 ~~~~~~~~~-~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 179 (190)
T 2vup_A 101 EEIKEFVCT-KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKK 179 (190)
T ss_dssp HHHHHHHHH-HHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHH-hcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHH
Confidence 9999999 6 889999999555777777766777665544444222 234566999999999999999998888776654
No 12
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.8e-32 Score=188.25 Aligned_cols=154 Identities=50% Similarity=0.912 Sum_probs=111.8
Q ss_pred cCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHH
Q 031257 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQ 86 (163)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~ 86 (163)
-.+..+|+|++++.+|+.+++++++||++||+||++||++|+ +++.|++++++++++++.+++|++|++..++.++.+.
T Consensus 7 ~~~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~ 85 (171)
T 3cmi_A 7 HHMSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEE 85 (171)
T ss_dssp ---CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC---------
T ss_pred cchhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHH
Confidence 357899999999999999999999999999999999999999 9999999999999989999999997655555567888
Q ss_pred HHHHH-HhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccC-CccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 87 IADFV-CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG-DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 87 ~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+++|+ . +++++||++.+.|.++......|.++.....|+.+ ..+++.+++||||++|+|++++.|..+++++.+.
T Consensus 86 ~~~~~~~-~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 162 (171)
T 3cmi_A 86 IAQFCQL-NYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSET 162 (171)
T ss_dssp ----------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHH
T ss_pred HHHHHHh-ccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHH
Confidence 99998 6 88999999955566666666677766544333311 1233444899999999999999998888777654
No 13
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=1.8e-31 Score=183.29 Aligned_cols=134 Identities=21% Similarity=0.226 Sum_probs=101.8
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
.+++|+++|+|++.+.+|+.++|++++||++||+|| ++|||+|+.+++.|+++++++++.++.+++||.| +
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~ 74 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD--------P 74 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------C
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc--------c
Confidence 478999999999999999999999999999999999 9999999999999999999999999999999975 7
Q ss_pred HHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
.+..++|+. +++++||++ .|.+++.+. .|+..... .+..+.. -..|++||||++|+|++++.+
T Consensus 75 ~~~~~~~~~-~~~~~~p~l--~D~~~~v~~-~ygv~~~~-~~~~~~~-~~~p~tflID~~G~I~~~~~~ 137 (157)
T 4g2e_A 75 PFSNKAFKE-HNKLNFTIL--SDYNREVVK-KYNVAWEF-PALPGYV-LAKRAVFVIDKEGKVRYKWVS 137 (157)
T ss_dssp HHHHHHHHH-HTTCCSEEE--ECTTSHHHH-HTTCEEEC-TTSTTCE-EECEEEEEECTTSBEEEEEEE
T ss_pred hhHHHHHHH-HcCCcEEEE--EcCCcHHHH-HcCCcccc-ccCCCcc-eeeeeEEEECCCCEEEEEEEC
Confidence 888899987 899999999 787765443 22211110 0110010 123489999999999998654
No 14
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.96 E-value=1.6e-29 Score=170.28 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=109.8
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHH---HHHHhcCCCeEEEEEecCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQ---LYDKYKDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~---~~~~~~~~~~~ii~is~d~~~~~~ 80 (163)
....+|.++|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++ +++++++.++.+++|+.|
T Consensus 3 ~~~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d------ 76 (142)
T 3eur_A 3 AKNRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPD------ 76 (142)
T ss_dssp CTTCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECS------
T ss_pred hhhcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcC------
Confidence 45678999999999999999999999999999999999999999999999999 999999889999999987
Q ss_pred CCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhh
Q 031257 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~ 160 (163)
...+.+++++. +++..|+.. .|..+.. ......++ .++| ++||||++|+|+++..+ .++++
T Consensus 77 -~~~~~~~~~~~-~~~~~~~~~--~d~~~~~-------~~~~~~~v--~~~P---~~~lid~~G~i~~~~~~---~~~l~ 137 (142)
T 3eur_A 77 -EELDEWKKHRN-DFAKEWTNG--YDKELVI-------KNKNLYDL--RAIP---TLYLLDKNKTVLLKDAT---LQKVE 137 (142)
T ss_dssp -SCHHHHHHHGG-GSCTTSEEE--ECTTCHH-------HHTTCSCC--TTCS---EEEEECTTCBEEEEEEC---HHHHH
T ss_pred -CCHHHHHHHHH-hcccccccc--cCccchh-------hhhhhcCC--CcCC---eEEEECCCCcEEecCCC---HHHHH
Confidence 46788899987 788999887 6654320 01112233 4566 99999999999998765 34444
Q ss_pred h
Q 031257 161 V 161 (163)
Q Consensus 161 ~ 161 (163)
+
T Consensus 138 ~ 138 (142)
T 3eur_A 138 Q 138 (142)
T ss_dssp H
T ss_pred H
Confidence 3
No 15
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.96 E-value=6.8e-30 Score=174.70 Aligned_cols=142 Identities=16% Similarity=0.256 Sum_probs=115.3
Q ss_pred cCCCcccceEEecC--CCCeeeccccCCcEEEEEeccCCCCCChhh-HHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 7 QNPESIFDLSVKDA--RGHEVDLSTYKGKVLLIVNVASKCGMTNSN-YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 7 ~~~~~~p~f~l~~~--~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~-~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
+.|.++|+|++.+. +|+.+++++++||++||+||++||++|+.+ ++.|+++++++++.++.+++|++|. ...+.++
T Consensus 1 s~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~-~~~~~~~ 79 (158)
T 3eyt_A 1 SNAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVF-EHHEAMT 79 (158)
T ss_dssp CCCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCC-SCGGGSC
T ss_pred CCCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecc-cccccCC
Confidence 36889999999994 899999999999999999999999999997 9999999999998889999999861 1122368
Q ss_pred HHHHHHHHHhhcCCccceeeeeecCCCcch-hHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHAS-PLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+.+++|+. +++++||++ .|..+.... .+...+ |+ .++| ++||||++|+|++++.|..+.+++.+.
T Consensus 80 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~~~~-----~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 146 (158)
T 3eyt_A 80 PISLKAFLH-EYRIKFPVG--VDQPGDGAMPRTMAAY-----QM--RGTP---SLLLIDKAGDLRAHHFGDVSELLLGAE 146 (158)
T ss_dssp HHHHHHHHH-HTTCCSCEE--EECCCSSSSCHHHHHT-----TC--CSSS---EEEEECTTSEEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHHH-HcCCCceEE--EcCccchhhHHHHHHc-----CC--CCCC---EEEEECCCCCEEEEEeCCCCHHHHHHH
Confidence 899999997 899999998 666553210 112221 33 5566 999999999999999998888777654
No 16
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.96 E-value=8.1e-30 Score=171.94 Aligned_cols=128 Identities=12% Similarity=0.184 Sum_probs=102.0
Q ss_pred cccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 3 SQFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
...+.+|.++|+|++ +.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++++.+++|++| .
T Consensus 4 ~~~l~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d-------~ 75 (143)
T 4fo5_A 4 TEGVNPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMD-------E 75 (143)
T ss_dssp CBSSSTTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECC-------S
T ss_pred ccccCCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEcc-------C
Confidence 456889999999999 89999999999999999999999999999999999999999999889999999987 4
Q ss_pred CHHHHHHHHHhhcCCcc-ceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 83 SNDQIADFVCTRFKSEF-PIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.+.++++++ +++++| +.+ .|..+.... +... .|+ .++| ++||||++|+|+++..+
T Consensus 76 ~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~-~~~~-----~~v--~~~P---~~~lid~~G~i~~~~~~ 132 (143)
T 4fo5_A 76 KESIFTETVK-IDKLDLSTQF--HEGLGKESE-LYKK-----YDL--RKGF---KNFLINDEGVIIAANVT 132 (143)
T ss_dssp CHHHHHHHHH-HHTCCGGGEE--ECTTGGGSH-HHHH-----TTG--GGCC---CEEEECTTSBEEEESCC
T ss_pred CHHHHHHHHH-HhCCCCceee--ecccccchH-HHHH-----cCC--CCCC---cEEEECCCCEEEEccCC
Confidence 6788999997 899999 777 555432211 1111 133 4556 99999999999998654
No 17
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.96 E-value=4.7e-31 Score=182.54 Aligned_cols=134 Identities=17% Similarity=0.243 Sum_probs=109.1
Q ss_pred cccCCCcccceEEecCCCCeeecccc--CCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTY--KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~ 81 (163)
.+++|+++|+|++.+.+|+.++|+++ +||++||+|| ++|||+|..+++.|++++++|+++|+.+++||.|
T Consensus 4 ml~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d------- 76 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVD------- 76 (164)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESS-------
T ss_pred cccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCC-------
Confidence 47899999999999999999999998 8998888887 9999999999999999999999999999999974
Q ss_pred CCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
+.+..++|.. +++++||++ .|.+++.+. .|+.......+......| ++||||++|+|++++.+.
T Consensus 77 -~~~~~~~~~~-~~~~~fp~l--~D~~~~v~~-~ygv~~~~~~~~~~~~~p---~tflID~~G~I~~~~~~~ 140 (164)
T 4gqc_A 77 -SPWCLKKFKD-ENRLAFNLL--SDYNREVIK-LYNVYHEDLKGLKMVAKR---AVFIVKPDGTVAYKWVTD 140 (164)
T ss_dssp -CHHHHHHHHH-HTTCCSEEE--ECTTSHHHH-HTTCEEEEETTEEEEECC---EEEEECTTSBEEEEEECS
T ss_pred -CHHHHHHHHH-hcCccccee--ecCchHHHH-HcCCcccccccCcCCeee---EEEEECCCCEEEEEEEeC
Confidence 7888999986 899999999 787765443 232221111111112345 899999999999987654
No 18
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.96 E-value=2.2e-29 Score=173.25 Aligned_cols=126 Identities=17% Similarity=0.275 Sum_probs=107.5
Q ss_pred ccCCCcccceEEecCCCCeeeccccCCcE-EEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTYKGKV-LLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~~gk~-vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
+.+|.++|+|++.+.+|+.+++++++||+ +||+|| ++||++|+.+++.|++++++++++++.+++|++| +
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~ 73 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD--------D 73 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC--------C
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC--------C
Confidence 57899999999999999999999999997 999999 9999999999999999999999999999999984 6
Q ss_pred HHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccC--CccccCeeEEEECCCCcEEEEeCCCC
Q 031257 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG--DDIQWNFAKFLVDKNGQVVDRYYPTT 154 (163)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~~ip~~~~~~lid~~G~i~~~~~g~~ 154 (163)
.+.+++|+. +++++||++ .|.+..... .| |+.+ ..+| ++||||++|+|++++.|..
T Consensus 74 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~--------~v~~~~~~~P---~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 74 INSHKRFKE-KYKLPFILV--SDPDKKIRE-LY--------GAKGFILPAR---ITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp HHHHHHHHH-HTTCCSEEE--ECTTSHHHH-HT--------TCCCSSSCCC---EEEEECTTSBEEEEEECSS
T ss_pred HHHHHHHHH-HhCCCceEE--ECCcHHHHH-Hc--------CCCCcCcccc---eEEEECCCCEEEEEEecCC
Confidence 889999997 899999999 665443322 11 2200 2266 9999999999999998843
No 19
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.96 E-value=1.9e-29 Score=172.67 Aligned_cols=141 Identities=13% Similarity=0.298 Sum_probs=116.1
Q ss_pred CCCcccceEEec-CCCCeeeccccCCcEEEEEeccCCCCCChhh-HHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHH
Q 031257 8 NPESIFDLSVKD-ARGHEVDLSTYKGKVLLIVNVASKCGMTNSN-YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 8 ~~~~~p~f~l~~-~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~-~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~ 85 (163)
.|.++|+|++.+ .+|+.+++++++||++||+||++||++|+.+ ++.|++++++++++++.+++|++| ....+.++.+
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~~ 83 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTPE 83 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCHH
T ss_pred CCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCHH
Confidence 688999999999 8999999999999999999999999999996 999999999999989999999986 2222236889
Q ss_pred HHHHHHHhhcCCccceeeeeecCCC--cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 86 QIADFVCTRFKSEFPIFEKIDVNGE--HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+++|++ +++++||++ .|..+. ....+...+ |+ .++| ++||||++|+|++++.|..+.+++.+.
T Consensus 84 ~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~~~~~-----~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 149 (160)
T 3lor_A 84 ALKVFID-EFGIKFPVA--VDMPREGQRIPSTMKKY-----RL--EGTP---SIILADRKGRIRQVQFGQVDDFVLGLL 149 (160)
T ss_dssp HHHHHHH-HTTCCSCEE--EECCCTTCSSCHHHHHT-----TC--CSSS---EEEEECTTSBEEEEEESCCCHHHHHHH
T ss_pred HHHHHHH-HcCCCCcEE--ECCccccchhhhHHHhc-----cc--Cccc---eEEEECCCCcEEEEecCcCCHHHHHHH
Confidence 9999997 899999999 665554 111111211 33 5566 999999999999999998888777654
No 20
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.96 E-value=2.2e-29 Score=173.26 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=110.4
Q ss_pred ccCCCcccceE--EecCCCCeeeccccCCcEEEEEecc-CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 6 IQNPESIFDLS--VKDARGHEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 6 ~~~~~~~p~f~--l~~~~G~~~~l~~~~gk~vlv~f~~-s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
+.+|.++|+|+ +.+.+|+++++++++||++||+||+ +||++|+.+++.|++++++|+++++.+++|++|
T Consensus 7 l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d-------- 78 (163)
T 3gkn_A 7 AVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD-------- 78 (163)
T ss_dssp CCCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS--------
T ss_pred cccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC--------
Confidence 67899999999 9999999999999999999999997 999999999999999999999999999999984
Q ss_pred CHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhC-CCcccC-CccccCeeEEEECCCCcEEEEeCCCCCcchhh
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSG-KWGIFG-DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~-~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~ 160 (163)
+.+.+++|+. +++.+||++ .|.++.... .|...... ..|... ..+| ++||||++|+|++++.+......+.
T Consensus 79 ~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~~v~~~~~~~~~~~~~~~p---~~~lid~~G~i~~~~~~~~~~~~~~ 151 (163)
T 3gkn_A 79 SVKSHDNFCA-KQGFAFPLV--SDGDEALCR-AFDVIKEKNMYGKQVLGIER---STFLLSPEGQVVQAWRKVKVAGHAD 151 (163)
T ss_dssp CHHHHHHHHH-HHCCSSCEE--ECTTCHHHH-HTTCEEEEEETTEEEEEECC---EEEEECTTSCEEEEECSCCSTTHHH
T ss_pred CHHHHHHHHH-HhCCCceEE--ECCcHHHHH-HhCCccccccccccccCcce---EEEEECCCCeEEEEEcCCCcccCHH
Confidence 7899999997 889999999 676554332 12111000 000000 0145 9999999999999986655444433
No 21
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=1.7e-28 Score=166.69 Aligned_cols=134 Identities=22% Similarity=0.277 Sum_probs=110.3
Q ss_pred ccccCCCcccceEEecCCCCeeecc--ccCCcEEEEEeccCCCCC--ChhhHHHHHHHHHHh-cCCCeEEEEEecCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLS--TYKGKVLLIVNVASKCGM--TNSNYIELSQLYDKY-KDQGLEILAFPCNQFGE 78 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~--~~~gk~vlv~f~~s~C~~--C~~~~~~l~~~~~~~-~~~~~~ii~is~d~~~~ 78 (163)
..+.+|.++|+|++.+.+|+.++++ +++||++||.||++||++ |+.+++.|+++++++ +++++.+++|++|
T Consensus 3 ~~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d---- 78 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLD---- 78 (150)
T ss_dssp CTTSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECC----
T ss_pred ccccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcC----
Confidence 4578999999999999999999999 999999999999999999 999999999999999 8888999999997
Q ss_pred CCCCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcch
Q 031257 79 EEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLS 158 (163)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~ 158 (163)
++.+.+++|+. +++.+|+.+ .|..+... .+... .|+ .++| ++||||++|+|++++. +.++
T Consensus 79 ---~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~-~~~~~-----~~v--~~~P---~~~lid~~G~i~~~~~---~~~~ 138 (150)
T 3fw2_A 79 ---VDKQQWKDAIK-RDTLDWEQV--CDFGGLNS-EVAKQ-----YSI--YKIP---ANILLSSDGKILAKNL---RGEE 138 (150)
T ss_dssp ---SCHHHHHHHHH-HTTCCSEEE--CCSCGGGC-HHHHH-----TTC--CSSS---EEEEECTTSBEEEESC---CHHH
T ss_pred ---CCHHHHHHHHH-HhCCCceEE--EcCcccch-HHHHH-----cCC--CccC---eEEEECCCCEEEEccC---CHHH
Confidence 46789999997 899999999 66532111 11221 133 4555 9999999999999875 4444
Q ss_pred hhh
Q 031257 159 LEV 161 (163)
Q Consensus 159 ~~~ 161 (163)
+++
T Consensus 139 l~~ 141 (150)
T 3fw2_A 139 LKK 141 (150)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 22
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.96 E-value=4.2e-29 Score=167.94 Aligned_cols=131 Identities=13% Similarity=0.166 Sum_probs=108.4
Q ss_pred cCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHH---HHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQ---LYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~---~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
++|.++|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|.+ ++++++++++.+++|++| ++
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d-------~~ 74 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPD-------EN 74 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECS-------SC
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEec-------CC
Confidence 57999999999999999999999999999999999999999999999998 999998888999999987 57
Q ss_pred HHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+.+++++. +++.+||++ .|.++.... ....|+ .++| ++||||++|+|+++ ..+.+++++.
T Consensus 75 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-------~~~~~v--~~~P---~~~lid~~G~i~~~---~~~~~~l~~~ 135 (142)
T 3ewl_A 75 REEWATKAV-YMPQGWIVG--WNKAGDIRT-------RQLYDI--RATP---TIYLLDGRKRVILK---DTSMEQLIDY 135 (142)
T ss_dssp HHHHHHHHT-TSCTTCEEE--ECTTCHHHH-------TTCSCC--CSSS---EEEEECTTCBEEEC---SCCHHHHHHH
T ss_pred HHHHHHHHH-HcCCCccee--eCCccchhh-------HHHcCC--CCCC---eEEEECCCCCEEec---CCCHHHHHHH
Confidence 888999987 899999999 776543211 112233 4555 99999999999984 3455555543
No 23
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=5.9e-29 Score=179.18 Aligned_cols=131 Identities=21% Similarity=0.295 Sum_probs=111.4
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCc-EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGK-VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk-~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
..+++|.++|+|++.+.+|+.+++++++|| ++||+||++||++|+.+++.|++++++|+++++.|++|++|+......+
T Consensus 30 ~~l~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 30 NSITLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCCTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred CcCCCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 357889999999999999999999999999 5999999999999999999999999999999999999999754444447
Q ss_pred CHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeC
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~ 151 (163)
+.+.+++|+. +++++||++ .|.++.... .| |+ ..+| ++||||++|+|+++..
T Consensus 110 ~~~~~~~~~~-~~~~~~~~l--~D~~~~~~~-~~--------~v--~~~P---~~~liD~~G~i~~~g~ 161 (218)
T 3u5r_E 110 TLERVGAEVK-AYGYGFPYL--KDASQSVAK-AY--------GA--ACTP---DFFLYDRERRLVYHGQ 161 (218)
T ss_dssp SHHHHHHHHH-HHTCCSCEE--ECTTCHHHH-HH--------TC--CEES---EEEEECTTCBEEEEEC
T ss_pred CHHHHHHHHH-HhCCCccEE--ECCccHHHH-Hc--------CC--CCCC---eEEEECCCCcEEEecc
Confidence 8999999997 899999999 775543332 11 33 4556 9999999999998754
No 24
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.96 E-value=1.9e-29 Score=176.61 Aligned_cols=142 Identities=13% Similarity=0.209 Sum_probs=110.1
Q ss_pred ccccCCCc----ccceEEecCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCC
Q 031257 4 QFIQNPES----IFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGE 78 (163)
Q Consensus 4 ~~~~~~~~----~p~f~l~~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~ 78 (163)
..+++|+. +|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++++.|++|+.|
T Consensus 19 ~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D---- 94 (179)
T 3ixr_A 19 SHMNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD---- 94 (179)
T ss_dssp CSSCTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC----
T ss_pred cccCcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC----
Confidence 34677888 99999999999999999999999999998 8999999999999999999999999999999975
Q ss_pred CCCCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHh-CCCcc-cCCccccCeeEEEECCCCcEEEEeCCCCCc
Q 031257 79 EEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKS-GKWGI-FGDDIQWNFAKFLVDKNGQVVDRYYPTTSL 156 (163)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~-~~~~ip~~~~~~lid~~G~i~~~~~g~~~~ 156 (163)
+.+.+++|++ +++++||++ .|.++.... .|..... ...|. ....+| ++||||++|+|++++.+....
T Consensus 95 ----~~~~~~~~~~-~~~~~f~~l--~D~~~~~~~-~~gv~~~~~~~g~~~~~~~p---~~~lID~~G~I~~~~~~~~~~ 163 (179)
T 3ixr_A 95 ----SVKSHDSFCA-KQGFTFPLV--SDSDAILCK-AFDVIKEKTMYGRQVIGIER---STFLIGPTHRIVEAWRQVKVP 163 (179)
T ss_dssp ----CHHHHHHHHH-HHTCCSCEE--ECTTCHHHH-HTTCEEEECCC--CEEEECC---EEEEECTTSBEEEEECSCCST
T ss_pred ----CHHHHHHHHH-HcCCceEEE--ECCchHHHH-HcCCcccccccCcccCCcce---EEEEECCCCEEEEEEcCCCCC
Confidence 7888999997 889999999 776654332 2221110 00000 000134 999999999999998665444
Q ss_pred chhh
Q 031257 157 LSLE 160 (163)
Q Consensus 157 ~~~~ 160 (163)
..++
T Consensus 164 ~~~~ 167 (179)
T 3ixr_A 164 GHAE 167 (179)
T ss_dssp THHH
T ss_pred CCHH
Confidence 4333
No 25
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.96 E-value=1.3e-28 Score=172.47 Aligned_cols=137 Identities=16% Similarity=0.231 Sum_probs=115.4
Q ss_pred ccCCCcccceEEecC--CCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCe------EEEEEecCCCC
Q 031257 6 IQNPESIFDLSVKDA--RGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGL------EILAFPCNQFG 77 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~------~ii~is~d~~~ 77 (163)
+..|.++|+|++.+. +|+.+++++++||++||+||++||++|+.+++.|++++++++++++ .+++|++|.
T Consensus 31 ~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~-- 108 (183)
T 3lwa_A 31 EADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD-- 108 (183)
T ss_dssp GGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC--
T ss_pred cccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC--
Confidence 567899999999999 9999999999999999999999999999999999999999998888 999999861
Q ss_pred CCCCCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcc
Q 031257 78 EEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLL 157 (163)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~ 157 (163)
++.+.+++|++ +++++||++ .|..+.....+ . ..++ ..+| ++||||++|+|++++.|..+.+
T Consensus 109 ----~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~-~-----~~~v--~~~P---~~~lid~~G~i~~~~~g~~~~~ 170 (183)
T 3lwa_A 109 ----YSRDIAQDFVT-DNGLDYPSI--YDPPFMTAASL-G-----GVPA--SVIP---TTIVLDKQHRPAAVFLREVTSK 170 (183)
T ss_dssp ----CCHHHHHHHHH-HTTCCSCEE--ECTTCGGGGGT-T-----TCCT--TCCS---EEEEECTTSCEEEEECSCCCHH
T ss_pred ----CCHHHHHHHHH-HcCCCccEE--ECCcchHHHHh-c-----cCCC--CCCC---eEEEECCCCcEEEEEcCCCCHH
Confidence 26888999997 899999999 77766544321 1 0112 4455 9999999999999999988887
Q ss_pred hhhhc
Q 031257 158 SLEVI 162 (163)
Q Consensus 158 ~~~~~ 162 (163)
++.+.
T Consensus 171 ~l~~~ 175 (183)
T 3lwa_A 171 DVLDV 175 (183)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 26
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.96 E-value=1.4e-28 Score=167.01 Aligned_cols=132 Identities=20% Similarity=0.384 Sum_probs=112.8
Q ss_pred cCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHH
Q 031257 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQ 86 (163)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~ 86 (163)
+.|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++++++.+++|+++ ++.+.
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d-------~~~~~ 73 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVG-------ESKIA 73 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEES-------CCHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-------CCHHH
Confidence 36889999999999999999999999999999999999999999999999999999888999999986 46788
Q ss_pred HHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 87 IADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+++|+. +++++||++ .|.+..... .+ |+ .++| ++||||++|++++++.|..+.+++.+.
T Consensus 74 ~~~~~~-~~~~~~~~~--~d~~~~~~~----~~-----~v--~~~P---~~~lid~~G~i~~~~~G~~~~~~l~~~ 132 (151)
T 2f9s_A 74 VHNFMK-SYGVNFPVV--LDTDRQVLD----AY-----DV--SPLP---TTFLINPEGKVVKVVTGTMTESMIHDY 132 (151)
T ss_dssp HHHHHH-HHTCCSCEE--EETTSHHHH----HT-----TC--CSSC---EEEEECTTSEEEEEEESCCCHHHHHHH
T ss_pred HHHHHH-HcCCCceEE--ECCchHHHH----hc-----CC--CCCC---eEEEECCCCcEEEEEeCCCCHHHHHHH
Confidence 999987 789999999 665543222 11 33 4555 999999999999999998887777654
No 27
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.96 E-value=5.2e-28 Score=168.10 Aligned_cols=142 Identities=15% Similarity=0.239 Sum_probs=107.0
Q ss_pred ccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCC-CChhhHHHHHHHHHHhcCC--CeEEEEEecCCCCCCCCC
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCG-MTNSNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~-~C~~~~~~l~~~~~~~~~~--~~~ii~is~d~~~~~~~~ 82 (163)
.+.|.++|+|+|++.+|+++++++++||++||+||+|||| +|..+++.|.++++.+++. ++.+|+||+| ++.|
T Consensus 6 ~P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD----p~~D 81 (170)
T 4hde_A 6 KPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD----PDLD 81 (170)
T ss_dssp SCCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTC
T ss_pred cCCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC----cccc
Confidence 4568899999999999999999999999999999999998 7999999999999988654 5899999997 4568
Q ss_pred CHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhH----hCCCcccCCccccCeeEEEECCCCcEEEEeCCCC
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLK----SGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT 154 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~ 154 (163)
+++.+++|+. +++..++.+ ....+........... ..........+-|.+++||||++|+|+.++.|..
T Consensus 82 tp~~l~~y~~-~~~~~~~~~--~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~ 154 (170)
T 4hde_A 82 KPENLKAFIQ-KFTEDTSNW--NLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGIS 154 (170)
T ss_dssp CHHHHHHHHT-TTCSCCTTE--EEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSS
T ss_pred cHHHHHHHHH-HcCCCCCCc--eecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCC
Confidence 8999999997 788776654 2223322221211111 1111111134556779999999999999887644
No 28
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.96 E-value=2.5e-28 Score=164.73 Aligned_cols=135 Identities=15% Similarity=0.177 Sum_probs=112.5
Q ss_pred cccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 3 SQFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
+..+.+|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++++++.+++|++| +
T Consensus 2 ~~~~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~ 74 (148)
T 3hcz_A 2 NAPLLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE-------R 74 (148)
T ss_dssp CCCCCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC-------S
T ss_pred CCccCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec-------C
Confidence 345789999999999999999999999999999999999999999999999999999999989999999986 4
Q ss_pred CHHHHHHHHHhhcCCc-cceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchh
Q 031257 83 SNDQIADFVCTRFKSE-FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSL 159 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~ 159 (163)
+.+.+++|+. +++.+ |+++ .|..+... +.... |+ .++| +++|||++|+|++++.|..+.+++
T Consensus 75 ~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~--~~~~~-----~i--~~~P---~~~lid~~G~i~~~~~g~~~~~~~ 137 (148)
T 3hcz_A 75 KDEEWLKFIR-SKKIGGWLNV--RDSKNHTD--FKITY-----DI--YATP---VLYVLDKNKVIIAKRIGYENLDDF 137 (148)
T ss_dssp SSHHHHHHHH-HHTCTTSEEE--ECTTCCCC--HHHHH-----CC--CSSC---EEEEECTTCBEEEESCCGGGHHHH
T ss_pred CHHHHHHHHH-HcCCCCceEE--eccccchh--HHHhc-----Cc--CCCC---EEEEECCCCcEEEecCCHHHHHHH
Confidence 6778999997 78888 9998 67665410 11111 33 5566 999999999999998886544443
No 29
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.95 E-value=4.3e-28 Score=165.03 Aligned_cols=125 Identities=18% Similarity=0.289 Sum_probs=104.8
Q ss_pred ccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHH
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~ 85 (163)
+..|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++++++.+++|++| .+.+
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d-------~~~~ 75 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTD-------RREE 75 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECC-------SCHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEcc-------CCHH
Confidence 678999999999999999999999999999999999999999999999999999999889999999987 4678
Q ss_pred HHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeC
Q 031257 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (163)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~ 151 (163)
.+++++. +++.+|+++ .|.... ...+... .|+ .++| ++||||++|+|++++.
T Consensus 76 ~~~~~~~-~~~~~~~~~--~d~~~~-~~~~~~~-----~~v--~~~P---~~~lid~~G~i~~~~~ 127 (152)
T 2lrn_A 76 DWKKAIE-EDKSYWNQV--LLQKDD-VKDVLES-----YCI--VGFP---HIILVDPEGKIVAKEL 127 (152)
T ss_dssp HHHHHHH-HHTCCSEEE--EECHHH-HHHHHHH-----TTC--CSSC---EEEEECTTSEEEEECC
T ss_pred HHHHHHH-HhCCCCeEE--ecccch-hHHHHHH-----hCC--CcCC---eEEEECCCCeEEEeeC
Confidence 8999987 789999998 554210 0111111 133 4566 9999999999999874
No 30
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=4.3e-28 Score=165.40 Aligned_cols=133 Identities=26% Similarity=0.374 Sum_probs=108.4
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCH
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~ 84 (163)
....|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++| ...
T Consensus 8 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d-------~~~ 80 (152)
T 2lrt_A 8 DKIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLD-------GDE 80 (152)
T ss_dssp SSSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECS-------CCH
T ss_pred hhccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEcc-------CCH
Confidence 3457899999999999999999999999999999999999999999999999999999989999999987 355
Q ss_pred HHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhh
Q 031257 85 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (163)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~ 160 (163)
+.++++.. +.+|+++ .|.++.... +...+ |+ .++| ++||||++|+|++++.|..+.++..
T Consensus 81 ~~~~~~~~---~~~~~~~--~d~~~~~~~-~~~~~-----~v--~~~P---~~~lid~~G~i~~~~~g~~~~e~~~ 140 (152)
T 2lrt_A 81 HFWKTSAD---NLPWVCV--RDANGAYSS-YISLY-----NV--TNLP---SVFLVNRNNELSARGENIKDLDEAI 140 (152)
T ss_dssp HHHHHHHT---TCSSEEE--ECSSGGGCH-HHHHH-----TC--CSCS---EEEEEETTTEEEEETTTCSCHHHHH
T ss_pred HHHHHHHh---CCCceEE--ECCCCcchH-HHHHc-----Cc--ccCc---eEEEECCCCeEEEecCCHHHHHHHH
Confidence 66777753 3678888 676654221 11111 33 4566 9999999999999999887765543
No 31
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.95 E-value=3.9e-28 Score=168.38 Aligned_cols=148 Identities=18% Similarity=0.301 Sum_probs=113.2
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCC-CChhhHHHHHHHHHHhcCCC--eEEEEEecCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCG-MTNSNYIELSQLYDKYKDQG--LEILAFPCNQFGEEE 80 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~-~C~~~~~~l~~~~~~~~~~~--~~ii~is~d~~~~~~ 80 (163)
..+.+|.++|+|++.+.+|+.+++++++||++||+||++||+ +|+.+++.|+++++++++++ +.|++|++|. +
T Consensus 5 ~~l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~----~ 80 (174)
T 1xzo_A 5 IKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP----E 80 (174)
T ss_dssp CCSCCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT----T
T ss_pred CcCccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC----C
Confidence 457789999999999999999999999999999999999999 99999999999999998876 9999999872 2
Q ss_pred CCCHHHHHHHHHhhcCCcc---ceeeeeecCCCcchhHHHH--hH---hCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 81 PGSNDQIADFVCTRFKSEF---PIFEKIDVNGEHASPLYKL--LK---SGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~--~~---~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
.++.+.+++|++ +++++| +++ .|.+...... |.. +. ....+. ..+.+.|++||||++|+|++++.|
T Consensus 81 ~d~~~~~~~~~~-~~~~~~~~~~~l--~d~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~p~~~lid~~G~i~~~~~g 154 (174)
T 1xzo_A 81 NDKPKQLKKFAA-NYPLSFDNWDFL--TGYSQSEIEE-FALKSFKAIVKKPEGE--DQVIHQSSFYLVGPDGKVLKDYNG 154 (174)
T ss_dssp TCCHHHHHHHHT-TSCCCGGGEEEE--BCSCHHHHHH-HHHHHHCCCCCCCSSC--CSCCSCCEEEEECTTSEEEEEEES
T ss_pred CCCHHHHHHHHH-HcCCCCcceEEE--eCCCHHHHHH-HHHhhcCeeEeecCCC--CeeeeeeEEEEECCCCeEEEEEcC
Confidence 357889999987 899999 666 4544332221 211 00 000110 223344599999999999999888
Q ss_pred CCC--cchhhh
Q 031257 153 TTS--LLSLEV 161 (163)
Q Consensus 153 ~~~--~~~~~~ 161 (163)
... .+++.+
T Consensus 155 ~~~~~~~~l~~ 165 (174)
T 1xzo_A 155 VENTPYDDIIS 165 (174)
T ss_dssp SSSCCHHHHHH
T ss_pred CCCCCHHHHHH
Confidence 763 455544
No 32
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.95 E-value=9.3e-28 Score=164.91 Aligned_cols=140 Identities=17% Similarity=0.268 Sum_probs=115.0
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
..+..|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++++++.+++|++| ++
T Consensus 6 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d-------~~ 78 (165)
T 3or5_A 6 QADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVN-------EQ 78 (165)
T ss_dssp -CCCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECS-------CC
T ss_pred hhhcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-------CC
Confidence 45678999999999999999999999999999999999999999999999999999999989999999987 56
Q ss_pred HHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+.+++|+. +++++|+++ .|.. . ....|..... .++ .++| ++||||++|+|++++.|..+.+++.+.
T Consensus 79 ~~~~~~~~~-~~~~~~~~~--~~~~-~-~~~~~~~~~~--~~i--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 145 (165)
T 3or5_A 79 LPNVKNYMK-TQGIIYPVM--MATP-E-LIRAFNGYID--GGI--TGIP---TSFVIDASGNVSGVIVGPRSKADFDRI 145 (165)
T ss_dssp HHHHHHHHH-HHTCCSCEE--ECCH-H-HHHHHHTTST--TCS--CSSS---EEEEECTTSBEEEEECSCCCHHHHHHH
T ss_pred HHHHHHHHH-HcCCCCceE--ecCH-H-HHHHHhhhhc--cCC--CCCC---eEEEECCCCcEEEEEcCCCCHHHHHHH
Confidence 888999987 899999998 5432 1 1111211100 022 4455 999999999999999998888777664
No 33
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.95 E-value=4.6e-28 Score=170.33 Aligned_cols=129 Identities=19% Similarity=0.324 Sum_probs=108.6
Q ss_pred cccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 3 SQFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
...+..|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++++ +.+++|++|.......+
T Consensus 4 ~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 4 YPELPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp SCCCCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred cCcCCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 45577899999999999999999999999999999999999999999999999999999988 99999998743333336
Q ss_pred CHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEE
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDR 149 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~ 149 (163)
+.+.+++|+. +++++||++ .|.+..... .| |+ ..+| ++||||++|+|+++
T Consensus 83 ~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~--------~v--~~~P---~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 83 APEKMAAFAE-EHGIFFPYL--LDETQEVAK-AY--------RA--LRTP---EVFLFDERRLLRYH 132 (188)
T ss_dssp SHHHHHHHHH-HHTCCSCEE--ECSSSHHHH-HT--------TC--CEES---EEEEECTTCBEEEE
T ss_pred CHHHHHHHHH-HhCCCceEE--ECCcchHHH-Hc--------CC--CCCC---eEEEECCCCcEEEE
Confidence 7889999997 889999998 665543322 11 33 4556 99999999999998
No 34
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.95 E-value=1.1e-27 Score=162.58 Aligned_cols=132 Identities=23% Similarity=0.414 Sum_probs=111.9
Q ss_pred ccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHH
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~ 85 (163)
+.+|.++|+|++.+ +|+.+++++++||++||.||++||++|+.+++.|.+++++++++++.+++|++| ...+
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~~ 74 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLD-------AKTG 74 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------SSHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECC-------CCHH
Confidence 67899999999999 999999999999999999999999999999999999999999989999999987 4678
Q ss_pred HHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCc--chhhhc
Q 031257 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSL--LSLEVI 162 (163)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~--~~~~~~ 162 (163)
.+++++. +++.+|+++ .|.++.... .+ |+ .++| ++||||++|+|++++.|..+. +++.+.
T Consensus 75 ~~~~~~~-~~~~~~~~~--~d~~~~~~~----~~-----~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~~~l~~~ 136 (152)
T 3gl3_A 75 DAMKFLA-QVPAEFTVA--FDPKGQTPR----LY-----GV--KGMP---TSFLIDRNGKVLLQHVGFRPADKEALEQQ 136 (152)
T ss_dssp HHHHHHH-HSCCCSEEE--ECTTCHHHH----HT-----TC--CSSS---EEEEECTTSBEEEEEESCCTTTHHHHHHH
T ss_pred HHHHHHH-HcCCCCcee--ECCcchhHH----Hc-----CC--CCCC---eEEEECCCCCEEEEEccCCCcCHHHHHHH
Confidence 8899987 899999999 776543222 11 33 5566 999999999999998886544 455543
No 35
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.95 E-value=2e-27 Score=160.27 Aligned_cols=127 Identities=17% Similarity=0.255 Sum_probs=105.7
Q ss_pred ccccCCCcccceEEecCCCCeeecc--ccCCcEEEEEeccCCCCCChhhHHHHHHHHHHh-cCCCeEEEEEecCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLS--TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKY-KDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~--~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~-~~~~~~ii~is~d~~~~~~ 80 (163)
..+.+|.++|+|++.+.+|+.++++ +++||++||.||++||++|+.+++.|.++++++ +++++.+++|++|
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d------ 76 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLD------ 76 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECC------
T ss_pred ccccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECC------
Confidence 4578999999999999999999999 999999999999999999999999999999999 8888999999987
Q ss_pred CCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeC
Q 031257 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~ 151 (163)
.+.+.+++++. +++.+|+++ .|..+... .+...+ |+ .++| +++|||++|+|++++.
T Consensus 77 -~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~-~~~~~~-----~v--~~~P---~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 77 -IDREAWETAIK-KDTLSWDQV--CDFTGLSS-ETAKQY-----AI--LTLP---TNILLSPTGKILARDI 132 (148)
T ss_dssp -SCHHHHHHHHH-HTTCCSEEE--CCSCGGGC-HHHHHT-----TC--CSSS---EEEEECTTSBEEEESC
T ss_pred -CCHHHHHHHHH-HcCCCceEE--EccCCcch-HHHHhc-----CC--CCcC---EEEEECCCCeEEEecC
Confidence 46788999997 899999998 55532111 111111 33 4555 9999999999999876
No 36
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.95 E-value=3.7e-28 Score=171.70 Aligned_cols=142 Identities=17% Similarity=0.215 Sum_probs=115.6
Q ss_pred ccccCCCcccceEEe-cCCCCeeeccccCCc-EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCC
Q 031257 4 QFIQNPESIFDLSVK-DARGHEVDLSTYKGK-VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~-~~~G~~~~l~~~~gk-~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~ 81 (163)
..+..|..+|+|++. +.+|+.+++++++|| ++||+||++||++|+.+++.|++++++++++++.+++|++|.......
T Consensus 16 ~~~~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~ 95 (196)
T 2ywi_A 16 NMFPLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPE 95 (196)
T ss_dssp CCCCTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGG
T ss_pred cCCCcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 346789999999999 999999999999998 599999999999999999999999999998889999999974332223
Q ss_pred CCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEe---------CC
Q 031257 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRY---------YP 152 (163)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~---------~g 152 (163)
++.+.+++|+. +++.+||++ .|.+..... .| |+ ..+| ++||||++|+|++++ .|
T Consensus 96 d~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~--------~v--~~~P---~~~lid~~G~i~~~~~~~~~~~~~~g 158 (196)
T 2ywi_A 96 DSPENMKKVAE-ELGYPFPYL--YDETQEVAK-AY--------DA--ACTP---DFYIFDRDLKCVYRGQLDDSRPNNGI 158 (196)
T ss_dssp GSHHHHHHHHH-HHTCCSCEE--ECSSCHHHH-HH--------TC--CEES---EEEEEETTCBEEEEECSSSCCTTTCC
T ss_pred cCHHHHHHHHH-HcCCCceEE--ECCchHHHH-Hh--------CC--CCCC---eEEEEcCCCeEEEccccCcccccccC
Confidence 68899999997 889999998 665543322 11 33 4556 999999999999984 45
Q ss_pred CCCcchhhhc
Q 031257 153 TTSLLSLEVI 162 (163)
Q Consensus 153 ~~~~~~~~~~ 162 (163)
..+.+++.+.
T Consensus 159 ~~~~~~l~~~ 168 (196)
T 2ywi_A 159 PVTGESIRAA 168 (196)
T ss_dssp CCCCHHHHHH
T ss_pred ccCHHHHHHH
Confidence 5566666554
No 37
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.95 E-value=1e-27 Score=164.35 Aligned_cols=131 Identities=19% Similarity=0.330 Sum_probs=107.6
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCc-EEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGK-VLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk-~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
.+..|.++|+|++.+.+|+.+++++++|| ++||.|| ++||++|+.+++.|++++++++++++.+++|++|
T Consensus 8 ~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d-------- 79 (160)
T 1xvw_A 8 MLNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG-------- 79 (160)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC--------
T ss_pred CCCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC--------
Confidence 37789999999999999999999999998 9999998 9999999999999999999999889999999985
Q ss_pred CHHHHHHHHHhhcCCccceeeeeec--CCCcchhHHHHhHhCCCcccC--CccccCeeEEEECCCCcEEEEeCCCCCc
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDV--NGEHASPLYKLLKSGKWGIFG--DDIQWNFAKFLVDKNGQVVDRYYPTTSL 156 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~~~~~~~~~--~~ip~~~~~~lid~~G~i~~~~~g~~~~ 156 (163)
+.+.+++|+. +++.+||++ .|. ++.... .| |+.. .++| .|++||||++|+|++++.|..+.
T Consensus 80 ~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~-~~--------~v~~~~~~~p-~~~~~lid~~G~i~~~~~g~~~~ 144 (160)
T 1xvw_A 80 PPPTHKIWAT-QSGFTFPLL--SDFWPHGAVSQ-AY--------GVFNEQAGIA-NRGTFVVDRSGIIRFAEMKQPGE 144 (160)
T ss_dssp CHHHHHHHHH-HHTCCSCEE--ECTTTTTHHHH-HT--------TCEETTTTEE-CSEEEEECTTSBEEEEEECCTTC
T ss_pred CHHHHHHHHH-hcCCCceEE--ecCCcChHHHH-Hc--------CCccccCCCe-eeeEEEECCCCeEEEEEecCCCC
Confidence 6788999997 789999998 663 332221 11 2210 0333 23899999999999998887643
No 38
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.95 E-value=6.1e-28 Score=171.91 Aligned_cols=136 Identities=18% Similarity=0.222 Sum_probs=108.6
Q ss_pred CccccccCCCcccceEEecC--CC--CeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCC
Q 031257 1 MTSQFIQNPESIFDLSVKDA--RG--HEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQ 75 (163)
Q Consensus 1 m~~~~~~~~~~~p~f~l~~~--~G--~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~ 75 (163)
|....+..|.++|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|+++++.+++|++|
T Consensus 1 m~~~~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D- 79 (202)
T 1uul_A 1 MSCGEAEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD- 79 (202)
T ss_dssp ---CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-
T ss_pred CCcccccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-
Confidence 66677889999999999997 78 899999999999999999 9999999999999999999999889999999985
Q ss_pred CCCCCCCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEE
Q 031257 76 FGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 148 (163)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~ 148 (163)
+.+..++|++ ++ +.+||++ .|.++.... .|.......+ ..+| ++||||++|+|++
T Consensus 80 -------~~~~~~~~~~-~~~~~~~~~~~~~p~l--~D~~~~~~~-~ygv~~~~~g----~~~P---~~~lid~~G~i~~ 141 (202)
T 1uul_A 80 -------SEYSHLAWTS-IERKRGGLGQMNIPIL--ADKTKCIMK-SYGVLKEEDG----VAYR---GLFIIDPKQNLRQ 141 (202)
T ss_dssp -------CHHHHHHHHH-SCGGGTCCCSCSSCEE--ECTTCHHHH-HHTCEETTTT----EECE---EEEEECTTSBEEE
T ss_pred -------CHHHHHHHHH-HHHhhCCCCCCceeEE--ECCchHHHH-HcCCccCCCC----ceee---EEEEECCCCEEEE
Confidence 6778888987 66 7899999 675543332 2221111000 1556 9999999999999
Q ss_pred EeCCCCC
Q 031257 149 RYYPTTS 155 (163)
Q Consensus 149 ~~~g~~~ 155 (163)
++.|..+
T Consensus 142 ~~~g~~~ 148 (202)
T 1uul_A 142 ITVNDLP 148 (202)
T ss_dssp EEEECTT
T ss_pred EEeCCCC
Confidence 9776544
No 39
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=2.1e-27 Score=161.56 Aligned_cols=133 Identities=17% Similarity=0.344 Sum_probs=111.5
Q ss_pred ccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHH
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~ 85 (163)
+.+|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|.++++++++.++.+++|++|. ++.+
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------~~~~ 75 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDE------GGKV 75 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCT------THHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCC------cchH
Confidence 4689999999999999999999999999999999999999999999999999999998889999999872 3478
Q ss_pred HHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCC--Ccchhhh
Q 031257 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLEV 161 (163)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~--~~~~~~~ 161 (163)
.+++|+. +++.+|+++ .|.+..... .| |+ .++| ++||||++|+|++++.|.. +.+++.+
T Consensus 76 ~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~--------~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~~~l~~ 136 (154)
T 3kcm_A 76 AVEEFFR-KTGFTLPVL--LDADKRVGK-LY--------GT--TGVP---ETFVIDRHGVILKKVVGAMEWDHPEVIA 136 (154)
T ss_dssp HHHHHHH-HHCCCCCEE--ECTTCHHHH-HH--------TC--CSBC---EEEEECTTSBEEEEEESCCCTTSHHHHH
T ss_pred HHHHHHH-HcCCCeeEE--ecCchHHHH-Hh--------CC--CCCC---eEEEECCCCcEEEEEcCCCccccHHHHH
Confidence 8899987 889999999 666543322 11 33 5566 9999999999999988876 4445544
No 40
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.95 E-value=3.9e-28 Score=175.32 Aligned_cols=128 Identities=17% Similarity=0.272 Sum_probs=104.5
Q ss_pred ccCCCcccceEEecC--CC--Ceeecccc-CCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCC
Q 031257 6 IQNPESIFDLSVKDA--RG--HEVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G--~~~~l~~~-~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~ 79 (163)
+..|.++|+|++.+. +| +.++++++ +||++||+|| ++|||+|+.+++.|++++++|+++++.|++|++|
T Consensus 25 l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D----- 99 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD----- 99 (221)
T ss_dssp -CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC-----
Confidence 568999999999998 99 99999999 9999999999 9999999999999999999999889999999985
Q ss_pred CCCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.+..++|++ ++ +++||++ .|.++.... .|... ... | ..+| ++||||++|+|++++.+
T Consensus 100 ---~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~-~ygv~-~~~-g---~~~P---~~~lID~~G~I~~~~~g 164 (221)
T 2c0d_A 100 ---SVYSHLAWKN-MPIEKGGIGNVEFTLV--SDINKDISK-NYNVL-YDN-S---FALR---GLFIIDKNGCVRHQTVN 164 (221)
T ss_dssp ---CHHHHHHHHH-SCGGGTCCCSCSSEEE--ECTTSHHHH-HTTCE-ETT-T---EECE---EEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HhhhhcCccCCceEEE--ECCchHHHH-HcCCc-ccC-C---Cccc---eEEEECCCCeEEEEEec
Confidence 6778888987 66 7789998 675543322 22211 100 0 1345 99999999999999766
Q ss_pred C
Q 031257 153 T 153 (163)
Q Consensus 153 ~ 153 (163)
.
T Consensus 165 ~ 165 (221)
T 2c0d_A 165 D 165 (221)
T ss_dssp C
T ss_pred C
Confidence 4
No 41
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.95 E-value=1.4e-27 Score=167.92 Aligned_cols=137 Identities=14% Similarity=0.152 Sum_probs=108.8
Q ss_pred ccCCCcccceEEecCCCC----eeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCC
Q 031257 6 IQNPESIFDLSVKDARGH----EVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~----~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~ 80 (163)
+..|.++|+|++.+.+|+ .+++++++||++||+|| ++||++|+.+++.|++++++++++++.+++|++|
T Consensus 1 ~~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d------ 74 (187)
T 1we0_A 1 SLIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD------ 74 (187)
T ss_dssp CCTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS------
T ss_pred CCCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC------
Confidence 467999999999999999 99999999999999999 9999999999999999999999888999999985
Q ss_pred CCCHHHHHHHHHhhc----CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCC--
Q 031257 81 PGSNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT-- 154 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~-- 154 (163)
+.+..++|++ ++ +.+|+++ .|.+..... .|....... +..+| ++||||++|+|++++.|..
T Consensus 75 --~~~~~~~~~~-~~~~~~~~~~~~~--~d~~~~~~~-~~~v~~~~~----g~~~P---~~~lid~~G~i~~~~~g~~~~ 141 (187)
T 1we0_A 75 --THFVHKAWHE-NSPAVGSIEYIMI--GDPSQTISR-QFDVLNEET----GLADR---GTFIIDPDGVIQAIEINADGI 141 (187)
T ss_dssp --CHHHHHHHHH-SCHHHHTCCSEEE--ECTTCHHHH-HTTCEETTT----TEECE---EEEEECTTSBEEEEEEECTTS
T ss_pred --CHHHHHHHHH-HhccccCCCceEE--ECCchHHHH-HhCCCcCCC----Cceee---EEEEECCCCeEEEEEecCCCC
Confidence 5778888887 66 7999998 665433222 111100000 01455 9999999999999987764
Q ss_pred --Ccchhhh
Q 031257 155 --SLLSLEV 161 (163)
Q Consensus 155 --~~~~~~~ 161 (163)
+.+++.+
T Consensus 142 ~~~~~~l~~ 150 (187)
T 1we0_A 142 GRDASTLIN 150 (187)
T ss_dssp CCCTTHHHH
T ss_pred CCCHHHHHH
Confidence 4455544
No 42
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=1.3e-27 Score=162.48 Aligned_cols=129 Identities=14% Similarity=0.202 Sum_probs=103.6
Q ss_pred ccceEEec-CCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHH
Q 031257 12 IFDLSVKD-ARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADF 90 (163)
Q Consensus 12 ~p~f~l~~-~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~ 90 (163)
+|.+.+.. .+|+.+++++++||++||+||++||++|+.+++.|+++++++++.++.+++|++| +.+.+++|
T Consensus 3 ~pa~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~ 74 (151)
T 3raz_A 3 LSADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNF 74 (151)
T ss_dssp ----CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHH
T ss_pred CCcchhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHH
Confidence 34444444 7999999999999999999999999999999999999999998889999999985 67899999
Q ss_pred HHhhcCCccceeeeeecCCCcchhHHHHhHhCCCc--ccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 91 VCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG--IFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 91 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ +++++||++ .|..... ..+...+ | + .++| ++||||++|+|++++.|..+.+++.+.
T Consensus 75 ~~-~~~~~~~~~--~~~~~~~-~~~~~~~-----~~~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 134 (151)
T 3raz_A 75 LK-QTPVSYPIW--RYTGANS-RNFMKTY-----GNTV--GVLP---FTVVEAPKCGYRQTITGEVNEKSLTDA 134 (151)
T ss_dssp HH-HSCCSSCEE--EECCSCH-HHHHHTT-----TCCS--CCSS---EEEEEETTTTEEEECCSCCCHHHHHHH
T ss_pred HH-HcCCCCceE--ecCccch-HHHHHHh-----CCcc--CCCC---EEEEECCCCcEEEEECCCCCHHHHHHH
Confidence 97 899999999 5543322 2122211 2 2 4566 999999999999999999888887764
No 43
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.95 E-value=1.4e-27 Score=160.46 Aligned_cols=137 Identities=18% Similarity=0.282 Sum_probs=114.0
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCH
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~ 84 (163)
.+..|.++|+|++.+.+|+.+++++ +||++||.||++||++|+.+++.|.++++++++.++.+++|++|. ..++.
T Consensus 8 ~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~----~~~~~ 82 (145)
T 3erw_A 8 EEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN----SEQNQ 82 (145)
T ss_dssp ----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG----GSSCH
T ss_pred cccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC----CcCCH
Confidence 4678999999999999999999999 999999999999999999999999999999997789999999862 23488
Q ss_pred HHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhcC
Q 031257 85 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (163)
+.+++|+. +++.+|+++ .|.+..... .+ ++ .++| +++|||++|+|++++.|..+.+++.+.|
T Consensus 83 ~~~~~~~~-~~~~~~~~~--~d~~~~~~~----~~-----~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 83 QVVEDFIK-ANKLTFPIV--LDSKGELMK----EY-----HI--ITIP---TSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHHHH-HTTCCSCEE--ECSSSHHHH----HT-----TC--CEES---EEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHH-HcCCceeEE--EcCchhHHH----hc-----Cc--CccC---eEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 89999987 899999998 665543322 11 33 4556 9999999999999999998888887653
No 44
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=1.7e-27 Score=161.86 Aligned_cols=133 Identities=18% Similarity=0.290 Sum_probs=113.1
Q ss_pred cCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHH
Q 031257 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQ 86 (163)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~ 86 (163)
..|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++++++.+++|+.+ .++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~------~~~~~~ 76 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQP------IDPIES 76 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECT------TSCHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecC------CCCHHH
Confidence 47899999999999999999999999999999999999999999999999999999888999999975 367889
Q ss_pred HHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 87 IADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+++|+. +++.+|+++ .|.+..... .+ |+ .++| ++||||++|++++++.|..+.+++.+.
T Consensus 77 ~~~~~~-~~~~~~~~~--~d~~~~~~~----~~-----~i--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 135 (153)
T 2l5o_A 77 VRQYVK-DYGLPFTVM--YDADKAVGQ----AF-----GT--QVYP---TSVLIGKKGEILKTYVGEPDFGKLYQE 135 (153)
T ss_dssp HHHHHH-HTTCCSEEE--ECSSCHHHH----HH-----TC--CSSS---EEEEECSSSCCCEEEESSCCHHHHHHH
T ss_pred HHHHHH-HcCCCceEE--cCchHHHHH----Hc-----CC--CccC---eEEEECCCCcEEEEEcCCCCHHHHHHH
Confidence 999987 899999998 665443221 11 23 4555 999999999999999998887777654
No 45
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.95 E-value=5.3e-28 Score=170.28 Aligned_cols=129 Identities=12% Similarity=0.176 Sum_probs=104.0
Q ss_pred cCCCcccceEEecC-CC--CeeeccccCCcEEEEEecc-CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 7 QNPESIFDLSVKDA-RG--HEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 7 ~~~~~~p~f~l~~~-~G--~~~~l~~~~gk~vlv~f~~-s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
..|.++|+|++.+. +| +.+++++++||++||+||+ +|||+|+.+++.|++++++|+++++.|++|+.|
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d-------- 73 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD-------- 73 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--------
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 57899999999999 59 8999999999999999995 999999999999999999999889999999985
Q ss_pred CHHHHHHHHHhhc----CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCC
Q 031257 83 SNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT 154 (163)
Q Consensus 83 ~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~ 154 (163)
+.+.+++|++ ++ +++||++ .|.++.... .|+...... | ..+| ++||||++|+|++++.+..
T Consensus 74 ~~~~~~~~~~-~~~~~~~~~fp~l--~D~~~~~~~-~ygv~~~~~-g---~~~p---~~~lID~~G~i~~~~~~~~ 138 (186)
T 1n8j_A 74 THFTHKAWHS-SSETIAKIKYAMI--GDPTGALTR-NFDNMREDE-G---LADR---ATFVVDPQGIIQAIEVTAE 138 (186)
T ss_dssp CHHHHHHHHH-HCTTGGGCCSEEE--ECTTSHHHH-HTTCEETTT-T---EECE---EEEEECTTSBEEEEEEECT
T ss_pred CHHHHHHHHH-HcCcccCCceeEE--ECCchHHHH-HhCCccCCC-C---ceee---EEEEECCCCeEEEEEecCC
Confidence 6778889987 67 8899999 675544332 121110000 0 1244 9999999999999987654
No 46
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.95 E-value=2.3e-27 Score=166.42 Aligned_cols=138 Identities=20% Similarity=0.231 Sum_probs=111.4
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCH
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~ 84 (163)
.+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|+++++++++.++.+++|++|. ++.
T Consensus 33 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~------~~~ 106 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDT------RDP 106 (186)
T ss_dssp ECCSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCC------SCT
T ss_pred cccCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCC------CCH
Confidence 35679999999999999999999999999999999999999999999999999999997789999999872 345
Q ss_pred HHHHHHHHhhcCC-ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCC--cchhhh
Q 031257 85 DQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTS--LLSLEV 161 (163)
Q Consensus 85 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~--~~~~~~ 161 (163)
+.+++|+. ++++ .||++ .|..+... ..+.... +. .++| ++||||++|+|++++.|..+ .+++.+
T Consensus 107 ~~~~~~~~-~~~~~~~~~~--~d~~~~~~----~~~~~~~-~~--~~~P---~~~lid~~G~i~~~~~g~~~~~~~~l~~ 173 (186)
T 1jfu_A 107 EKPKTFLK-EANLTRLGYF--NDQKAKVF----QDLKAIG-RA--LGMP---TSVLVDPQGCEIATIAGPAEWASEDALK 173 (186)
T ss_dssp THHHHHHH-HTTCCTTCCE--ECTTCHHH----HHHHTTT-CC--SSSS---EEEEECTTSBEEEEEESCCCTTSHHHHH
T ss_pred HHHHHHHH-HcCCCCCceE--ECCcchHH----HHhcccc-cc--CCCC---EEEEECCCCCEEEEEecCCccCHHHHHH
Confidence 77888887 7888 69998 66654332 2221111 11 2566 99999999999999888764 455554
No 47
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=4.2e-27 Score=159.72 Aligned_cols=135 Identities=18% Similarity=0.299 Sum_probs=111.4
Q ss_pred ccCCCccc-ceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCH
Q 031257 6 IQNPESIF-DLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 6 ~~~~~~~p-~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~ 84 (163)
+.+|.++| +|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++++++.+++|++| ...
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~ 75 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCD-------KNK 75 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECC-------SCH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEcc-------CcH
Confidence 67899999 9999999999999999999999999999999999999999999999999888999999987 456
Q ss_pred HHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhcC
Q 031257 85 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (163)
+.+++++. +++..++.+. .|.+.. +...+ |+ .++| +++|||++|++++++.|..+.+++++.|
T Consensus 76 ~~~~~~~~-~~~~~~~~~~-~d~~~~----~~~~~-----~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~l 138 (152)
T 2lja_A 76 KAWENMVT-KDQLKGIQLH-MGTDRT----FMDAY-----LI--NGIP---RFILLDRDGKIISANMTRPSDPKTAEKF 138 (152)
T ss_dssp HHHHHHHH-HHTCCSEEEE-CSSCTH----HHHHT-----TC--CSSC---CEEEECTTSCEEESSCCCTTCHHHHHHH
T ss_pred HHHHHHHH-hcCCCCceee-cCcchh----HHHHc-----Cc--CCCC---EEEEECCCCeEEEccCCCCCHHHHHHHH
Confidence 78899987 6788765541 343222 11211 33 4566 9999999999999998988888877653
No 48
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.95 E-value=3.4e-27 Score=164.67 Aligned_cols=132 Identities=14% Similarity=0.199 Sum_probs=110.3
Q ss_pred cccCCCcccceEEecCCC--CeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARG--HEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G--~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
.+.+|.++|+|++.+.+| +.+++++++||++||+||++||++|+.+++.|++++++ ++.+++|+++ +
T Consensus 29 ~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~-------d 97 (176)
T 3kh7_A 29 SALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYK-------D 97 (176)
T ss_dssp TTTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEES-------C
T ss_pred ccccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCC-------C
Confidence 366899999999999999 89999999999999999999999999999999999876 6999999986 6
Q ss_pred CHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+.+.+++|+. +++..|+.+. .|.++.... .| |+ .++| ++||||++|+|++++.|..+.+++.+.
T Consensus 98 ~~~~~~~~~~-~~~~~~~~~~-~d~~~~~~~-~~--------~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 161 (176)
T 3kh7_A 98 DNAAAIKWLN-ELHNPYLLSI-SDADGTLGL-DL--------GV--YGAP---ETYLIDKQGIIRHKIVGVVDQKVWREQ 161 (176)
T ss_dssp CHHHHHHHHH-HTTCCCSEEE-EETTCHHHH-HH--------TC--CSSC---EEEEECTTCBEEEEEESCCCHHHHHHH
T ss_pred CHHHHHHHHH-HcCCCCceEE-ECCcchHHH-Hc--------CC--CCCC---eEEEECCCCeEEEEEcCCCCHHHHHHH
Confidence 8899999997 8999998531 565543322 11 33 5566 999999999999999998888776654
Q ss_pred C
Q 031257 163 L 163 (163)
Q Consensus 163 l 163 (163)
|
T Consensus 162 l 162 (176)
T 3kh7_A 162 L 162 (176)
T ss_dssp T
T ss_pred H
Confidence 3
No 49
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.95 E-value=1.9e-27 Score=164.33 Aligned_cols=130 Identities=13% Similarity=0.065 Sum_probs=102.5
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
.+..|.++|+|++.+.+|+.+++++++||++||+|| ++||++|..+++.|+++++++ +++.+++|+.| +
T Consensus 16 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d--------~ 85 (165)
T 1q98_A 16 FPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD--------L 85 (165)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC--------C
Confidence 467899999999999999999999999999999999 799999999999999999999 67999999975 6
Q ss_pred HHHHHHHHHhhcCC-ccceeeeeec-CCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 84 NDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
.+.+++|++ ++++ +||++ .|. ++.... .|+..... .+. .++ +.|++||||++|+|++++.|
T Consensus 86 ~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~~-~~gv~~~~-~~~--~g~-~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 86 PFAQARFCG-AEGIENAKTV--STFRNHALHS-QLGVDIQT-GPL--AGL-TSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp HHHHTTCTT-TTTCTTEEEE--ECTTCTHHHH-HTTCEECS-STT--TTS-BCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHHHH-HcCCCceEEe--eccccchHHH-HhCceecc-ccc--CCc-cceeEEEEcCCCEEEEEEeC
Confidence 788888887 7899 79999 665 332221 22211000 000 011 23499999999999999865
No 50
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.95 E-value=2.4e-27 Score=163.45 Aligned_cols=128 Identities=13% Similarity=0.146 Sum_probs=103.2
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEecc-CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~-s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
.+..|.++|+|++.+.+|+.+++++++||++||+||+ +||++|+.+++.|+++++++ .++.+++|+.| +
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d--------~ 84 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD--------L 84 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------C
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC--------C
Confidence 4678999999999999999999999999999999995 99999999999999999999 57999999985 6
Q ss_pred HHHHHHHHHhhcCC-ccceeeeee-cCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 84 NDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
.+.+++|++ ++++ +||++ .| .++.... .|+..... .++ ..|++||||++|+|++++.|.
T Consensus 85 ~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~~-~~gv~~~~------~g~-~~p~~~liD~~G~i~~~~~g~ 145 (163)
T 1psq_A 85 PFAQKRWCG-AEGLDNAIML--SDYFDHSFGR-DYALLINE------WHL-LARAVFVLDTDNTIRYVEYVD 145 (163)
T ss_dssp HHHHHHHHH-HHTCTTSEEE--ECTTTCHHHH-HHTCBCTT------TCS-BCCEEEEECTTCBEEEEEECS
T ss_pred HHHHHHHHH-hcCCCCcEEe--cCCchhHHHH-HhCCcccc------CCc-eEEEEEEEcCCCeEEEEEecC
Confidence 788899987 7899 99998 66 4443222 22211000 022 123999999999999998764
No 51
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.95 E-value=2.2e-27 Score=164.75 Aligned_cols=129 Identities=15% Similarity=0.157 Sum_probs=103.8
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
.+..|.++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|+++++++ +++.+++|+.| +
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d--------~ 89 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD--------L 89 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------C
T ss_pred cCCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC--------C
Confidence 367899999999999999999999999999999999 799999999999999999999 57999999985 6
Q ss_pred HHHHHHHHHhhcCC-ccceeeeee-cCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 84 NDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
.+.+++|++ +++. +||++ .| .++.. ..|....... +..+..+| ++||||++|+|++++.+
T Consensus 90 ~~~~~~~~~-~~~~~~~~~l--~D~~~~~~--~~~gv~~~~~-~~~g~~~p---~~~liD~~G~i~~~~~~ 151 (171)
T 2yzh_A 90 PFAQKRFCE-SFNIQNVTVA--SDFRYRDM--EKYGVLIGEG-ALKGILAR---AVFIIDKEGKVAYVQLV 151 (171)
T ss_dssp HHHHHHHHH-HTTCCSSEEE--ECTTTCGG--GGGTCBBCSS-TTTTSBCC---EEEEECTTSBEEEEEEC
T ss_pred HHHHHHHHH-HcCCCCeEEe--ecCccCcH--HHhCCEeccc-ccCCceee---EEEEEcCCCeEEEEEeC
Confidence 788899987 7899 89999 66 44443 3333211100 00001245 99999999999999864
No 52
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.2e-28 Score=173.53 Aligned_cols=132 Identities=13% Similarity=0.199 Sum_probs=104.4
Q ss_pred ccccCCCcccceEEecC---CCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDA---RGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~---~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~ 79 (163)
..+..|.++|+|++.+. +|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++++.||+|++|
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D----- 91 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD----- 91 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 45778999999999975 46899999999999999999 9999999999999999999999889999999985
Q ss_pred CCCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.+..++|++ ++ +.+||++ .|.++.... .|....... +..+| ++||||++|+|++++.+
T Consensus 92 ---~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~-~ygv~~~~~----g~~~p---~~~lID~~G~I~~~~~g 157 (211)
T 2pn8_A 92 ---SQFTHLAWIN-TPRRQGGLGPIRIPLL--SDLTHQISK-DYGVYLEDS----GHTLR---GLFIIDDKGILRQITLN 157 (211)
T ss_dssp ---CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTSHHHH-HTTCEETTT----TEECE---EEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HhhhccCccCCceEEE--ECCchHHHH-HcCCcccCC----Ccccc---eEEEECCCCEEEEEEec
Confidence 6778888987 56 7899999 675543322 222110000 02355 99999999999999866
Q ss_pred CC
Q 031257 153 TT 154 (163)
Q Consensus 153 ~~ 154 (163)
..
T Consensus 158 ~~ 159 (211)
T 2pn8_A 158 DL 159 (211)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 53
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.95 E-value=3e-27 Score=167.41 Aligned_cols=130 Identities=15% Similarity=0.175 Sum_probs=106.3
Q ss_pred cccCCCcccceEEecCC-------------C--CeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEE
Q 031257 5 FIQNPESIFDLSVKDAR-------------G--HEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEI 68 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~-------------G--~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~i 68 (163)
.+..|.++|+|++.+.+ | +.+++++++||++||+|| ++||++|+.+++.|++++++++++++.+
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 47889999999999988 7 899999999999999999 9999999999999999999999888999
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHhhc----CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCC
Q 031257 69 LAFPCNQFGEEEPGSNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNG 144 (163)
Q Consensus 69 i~is~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G 144 (163)
++|++| +.+.+++|++ ++ +.+||++ .|.+..... .|..... .| ..+| ++||||++|
T Consensus 83 v~Vs~d--------~~~~~~~~~~-~~~~~~~~~~~~~--~d~~~~~~~-~~~v~~~--~g---~~~P---~~~lid~~G 142 (195)
T 2bmx_A 83 LGVSID--------SEFAHFQWRA-QHNDLKTLPFPML--SDIKRELSQ-AAGVLNA--DG---VADR---VTFIVDPNN 142 (195)
T ss_dssp EEEESS--------CHHHHHHHHH-HCTTGGGCCSCEE--ECTTSHHHH-HHTCBCT--TS---SBCE---EEEEECTTS
T ss_pred EEEECC--------CHHHHHHHHH-HhccccCCceeEE--eCCchHHHH-HhCCccc--CC---Cccc---eEEEEcCCC
Confidence 999985 5788889987 66 8899998 665433222 2211000 00 1555 999999999
Q ss_pred cEEEEeCCCC
Q 031257 145 QVVDRYYPTT 154 (163)
Q Consensus 145 ~i~~~~~g~~ 154 (163)
+|++++.|..
T Consensus 143 ~i~~~~~g~~ 152 (195)
T 2bmx_A 143 EIQFVSATAG 152 (195)
T ss_dssp BEEEEEEECT
T ss_pred eEEEEEecCC
Confidence 9999987765
No 54
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.95 E-value=1.3e-27 Score=165.30 Aligned_cols=126 Identities=17% Similarity=0.145 Sum_probs=102.3
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
.+..|.++|+|++.+.+|+.+++++++||++||+|| ++||++|..+++.|++++++ +++.+++|+.| +
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d--------~ 87 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD--------L 87 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC--------C
Confidence 467899999999999999999999999999999999 78999999999999999887 57999999974 7
Q ss_pred HHHHHHHHHhhcCC-ccceeeeeec-CCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 84 NDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
.+.+++|++ ++++ +||++ .|. ++.. ...|+......+ ..+| ++||||++|+|++++.+
T Consensus 88 ~~~~~~~~~-~~~~~~~~~l--~D~~~~~~-~~~~gv~~~~~g----~~~p---~~~liD~~G~i~~~~~~ 147 (166)
T 3p7x_A 88 PFAQKRWCA-SAGLDNVITL--SDHRDLSF-GENYGVVMEELR----LLAR---AVFVLDADNKVVYKEIV 147 (166)
T ss_dssp HHHHHHHHH-HHTCSSCEEE--ECTTTCHH-HHHHTCEETTTT----EECC---EEEEECTTCBEEEEEEC
T ss_pred HHHHHHHHH-HcCCCceEEc--cCCchhHH-HHHhCCccccCC----ceee---EEEEECCCCeEEEEEEc
Confidence 889999997 7899 89999 776 4432 223322111110 1245 99999999999998654
No 55
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.95 E-value=1.6e-27 Score=169.07 Aligned_cols=126 Identities=13% Similarity=0.209 Sum_probs=105.3
Q ss_pred ccCCCcccceEEecC--CCC---eeecccc-CCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCC
Q 031257 6 IQNPESIFDLSVKDA--RGH---EVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGE 78 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G~---~~~l~~~-~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~ 78 (163)
+..|.++|+|++.+. +|+ .++++++ +||++||+|| ++||++|+.+++.|++++++++++++.+++|++|
T Consensus 1 ~~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d---- 76 (198)
T 1zof_A 1 MVVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID---- 76 (198)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS----
T ss_pred CCCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC----
Confidence 467999999999998 898 9999999 9999999999 9999999999999999999999889999999985
Q ss_pred CCCCCHHHHHHHHHhh-------cCCccceeeeeecCCCcchhHHHHhHhCCCccc---CCccccCeeEEEECCCCcEEE
Q 031257 79 EEPGSNDQIADFVCTR-------FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF---GDDIQWNFAKFLVDKNGQVVD 148 (163)
Q Consensus 79 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---~~~ip~~~~~~lid~~G~i~~ 148 (163)
+.+..++|+. + ++++||++ .|.++.... .| |+. +..+| ++||||++|+|++
T Consensus 77 ----~~~~~~~~~~-~~~~~~~~~~~~~~~~--~d~~~~~~~-~~--------~v~~~~g~~~P---~~~lid~~G~i~~ 137 (198)
T 1zof_A 77 ----SEQVHFAWKN-TPVEKGGIGQVSFPMV--ADITKSISR-DY--------DVLFEEAIALR---GAFLIDKNMKVRH 137 (198)
T ss_dssp ----CHHHHHHHHT-SCGGGTCCCCCSSCEE--ECTTSHHHH-HT--------TCEETTTEECE---EEEEEETTTEEEE
T ss_pred ----CHHHHHHHHH-hhhhcccccCceeEEE--ECCchHHHH-Hh--------CCcccCCcccc---eEEEECCCCEEEE
Confidence 5778888886 6 78899998 665543322 11 220 01455 9999999999999
Q ss_pred EeCCCC
Q 031257 149 RYYPTT 154 (163)
Q Consensus 149 ~~~g~~ 154 (163)
++.|..
T Consensus 138 ~~~g~~ 143 (198)
T 1zof_A 138 AVINDL 143 (198)
T ss_dssp EEEESS
T ss_pred EEecCC
Confidence 987754
No 56
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.94 E-value=5.1e-27 Score=169.34 Aligned_cols=135 Identities=16% Similarity=0.201 Sum_probs=104.8
Q ss_pred ccccccCCCcccceEEec---CCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCC
Q 031257 2 TSQFIQNPESIFDLSVKD---ARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFG 77 (163)
Q Consensus 2 ~~~~~~~~~~~p~f~l~~---~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~ 77 (163)
....+..|.++|+|++.+ .+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++++.|++|++|
T Consensus 23 ~~~~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D--- 99 (220)
T 1zye_A 23 EDPAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD--- 99 (220)
T ss_dssp ----CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS---
T ss_pred cCCcccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC---
Confidence 345578899999999985 578999999999999999999 9999999999999999999999889999999985
Q ss_pred CCCCCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEe
Q 031257 78 EEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRY 150 (163)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~ 150 (163)
+.+..++|++ ++ +++||++ .|.+..... .|....... +..+| ++||||++|+|++++
T Consensus 100 -----~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~i~~-~ygv~~~~~----g~~~P---~~~liD~~G~I~~~~ 163 (220)
T 1zye_A 100 -----SHFSHLAWIN-TPRKNGGLGHMNIALL--SDLTKQISR-DYGVLLEGP----GLALR---GLFIIDPNGVIKHLS 163 (220)
T ss_dssp -----CHHHHHHHHT-SCGGGTCCCSCSSEEE--ECTTSHHHH-HTTCEETTT----TEECE---EEEEECTTSBEEEEE
T ss_pred -----CHHHHHHHHH-HHHHhCCCcCCceEEE--ECCcHHHHH-HhCCeecCC----Ccccc---eEEEECCCCEEEEEE
Confidence 5678888886 55 7899998 675543322 221110000 02556 999999999999987
Q ss_pred CCCCC
Q 031257 151 YPTTS 155 (163)
Q Consensus 151 ~g~~~ 155 (163)
.|..+
T Consensus 164 ~g~~~ 168 (220)
T 1zye_A 164 VNDLP 168 (220)
T ss_dssp EECTT
T ss_pred ecCCC
Confidence 76543
No 57
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.94 E-value=4.8e-27 Score=161.29 Aligned_cols=137 Identities=15% Similarity=0.192 Sum_probs=107.2
Q ss_pred cccceEEecCCCCeeeccccCCcEEEEEeccCCCCC-ChhhHHHHHHHHHHhcC----CCeEEEEEecCCCCCCCCCCHH
Q 031257 11 SIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 11 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~-C~~~~~~l~~~~~~~~~----~~~~ii~is~d~~~~~~~~~~~ 85 (163)
.+|+|++.+.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++.+++|++| ++.++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d----~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID----PERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC----TTTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC----CCCCCHH
Confidence 479999999999999999999999999999999998 99999999999999976 37999999997 3346788
Q ss_pred HHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccc------------cCeeEEEECCCCcEEEEeCCC
Q 031257 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQ------------WNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip------------~~~~~~lid~~G~i~~~~~g~ 153 (163)
.+++|+. +++.+|+.+ ..... ....+. . ..|+ ..+| +.+++||||++|+|++++.|.
T Consensus 78 ~~~~~~~-~~~~~~~~l--~~~~d-~~~~~~----~-~~~v--~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 146 (164)
T 2ggt_A 78 AIANYVK-EFSPKLVGL--TGTRE-EVDQVA----R-AYRV--YYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN 146 (164)
T ss_dssp HHHHHHH-TTCSSCEEE--ECCHH-HHHHHH----H-TTTC--CEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT
T ss_pred HHHHHHH-HcCCCeEEE--eCCHH-HHHHHH----H-hcCe--EEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC
Confidence 9999997 889999987 22110 000111 1 1122 2222 334899999999999999988
Q ss_pred CCcchhhhc
Q 031257 154 TSLLSLEVI 162 (163)
Q Consensus 154 ~~~~~~~~~ 162 (163)
.+++++.+.
T Consensus 147 ~~~~~l~~~ 155 (164)
T 2ggt_A 147 KRKGEIAAS 155 (164)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 887777654
No 58
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.94 E-value=4.2e-27 Score=163.94 Aligned_cols=133 Identities=17% Similarity=0.162 Sum_probs=105.7
Q ss_pred ccccCCCcccceEEe-cCCCCeeeccc-cCCcEEE-EEeccCCCCCCh-hhHHHHHHHHHHhcCCCeEEEE-EecCCCCC
Q 031257 4 QFIQNPESIFDLSVK-DARGHEVDLST-YKGKVLL-IVNVASKCGMTN-SNYIELSQLYDKYKDQGLEILA-FPCNQFGE 78 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~-~~~G~~~~l~~-~~gk~vl-v~f~~s~C~~C~-~~~~~l~~~~~~~~~~~~~ii~-is~d~~~~ 78 (163)
..+..|.++|+|++. +.+|+.++|++ ++||++| ++||++|||+|. .+++.|++++++|+++|+.+++ ||.|
T Consensus 13 ~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D---- 88 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN---- 88 (173)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS----
T ss_pred CCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC----
Confidence 457789999999999 99999999999 5998655 556699999999 5999999999999999999997 9975
Q ss_pred CCCCCHHHHHHHHHhhcCCc--cceeeeeecCCCcchhHHHHhHhC-----CCcccCCccccCeeEEEECCCCcEEEEeC
Q 031257 79 EEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSG-----KWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (163)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~ip~~~~~~lid~~G~i~~~~~ 151 (163)
+.+..++|++ +++.+ ||++ .|.++..+. .|+..... .++. ...| ++|||| +|+|++.+.
T Consensus 89 ----~~~~~~~f~~-~~~~~~~fp~l--~D~~~~va~-~yGv~~~~~~~~~~g~~--~~~r---~tfvID-dG~I~~~~v 154 (173)
T 3mng_A 89 ----DAFVTGEWGR-AHKAEGKVRLL--ADPTGAFGK-ETDLLLDDSLVSIFGNR--RLKR---FSMVVQ-DGIVKALNV 154 (173)
T ss_dssp ----CHHHHHHHHH-HTTCTTTCEEE--ECTTCHHHH-HHTCBCCSTTHHHHSSC--CBCC---EEEEEE-TTEEEEEEE
T ss_pred ----CHHHHHHHHH-HhCCCCceEEE--ECCChHHHH-HhCCCcccccccccCCc--ceEE---EEEEEE-CCEEEEEEE
Confidence 6788899987 78887 9999 887765544 23322110 0111 2345 999999 999999977
Q ss_pred CCC
Q 031257 152 PTT 154 (163)
Q Consensus 152 g~~ 154 (163)
+..
T Consensus 155 ~~~ 157 (173)
T 3mng_A 155 EPD 157 (173)
T ss_dssp CTT
T ss_pred eCC
Confidence 754
No 59
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.94 E-value=7.2e-27 Score=161.54 Aligned_cols=137 Identities=14% Similarity=0.199 Sum_probs=106.6
Q ss_pred cceEEecCCCCeeeccccCCcEEEEEeccCCCCC-ChhhHHHHHHHHHHhcC----CCeEEEEEecCCCCCCCCCCHHHH
Q 031257 13 FDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSNDQI 87 (163)
Q Consensus 13 p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~-C~~~~~~l~~~~~~~~~----~~~~ii~is~d~~~~~~~~~~~~~ 87 (163)
|+|++.+.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++.+++|++| +..++.+.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d----~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD----PERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC----STTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC----CCCCCHHHH
Confidence 8999999999999999999999999999999997 99999999999999974 47999999987 234678899
Q ss_pred HHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccC----------CccccCeeEEEECCCCcEEEEeCCCCCcc
Q 031257 88 ADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG----------DDIQWNFAKFLVDKNGQVVDRYYPTTSLL 157 (163)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~----------~~ip~~~~~~lid~~G~i~~~~~g~~~~~ 157 (163)
++|+. +++.+|+.+ .+.... ...+...+ |+.. ..+.+.|++||||++|+|++++.|..+++
T Consensus 83 ~~~~~-~~~~~~~~l--~~~~~~-~~~~~~~~-----~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~ 153 (171)
T 2rli_A 83 ARYVQ-DFHPRLLGL--TGSTKQ-VAQASHSY-----RVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAE 153 (171)
T ss_dssp HHHHH-TTCTTCCEE--ECCHHH-HHHHHHHS-----CCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHH
T ss_pred HHHHH-HcCCCeEEE--eCCHHH-HHHHHHHh-----CeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHH
Confidence 99997 889999988 432110 01111111 2200 11224559999999999999999988877
Q ss_pred hhhhc
Q 031257 158 SLEVI 162 (163)
Q Consensus 158 ~~~~~ 162 (163)
++.+.
T Consensus 154 ~l~~~ 158 (171)
T 2rli_A 154 QISDS 158 (171)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 60
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.94 E-value=2e-27 Score=170.74 Aligned_cols=130 Identities=16% Similarity=0.168 Sum_probs=105.8
Q ss_pred cccCCCcccceEEecC--CC--Ceeecccc-CCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCC
Q 031257 5 FIQNPESIFDLSVKDA--RG--HEVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGE 78 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~--~G--~~~~l~~~-~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~ 78 (163)
.+..|.++|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|+++++.||+|++|
T Consensus 20 ~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D---- 95 (213)
T 2i81_A 20 PTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD---- 95 (213)
T ss_dssp CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS----
T ss_pred cccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC----
Confidence 4678999999999998 89 89999999 9999999999 9999999999999999999999889999999985
Q ss_pred CCCCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeC
Q 031257 79 EEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (163)
Q Consensus 79 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~ 151 (163)
+.+..++|++ ++ +++||++ .|.++.... .|.... .. | ..+| ++||||++|+|++++.
T Consensus 96 ----~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~-~ygv~~-~~-g---~~~p---~~~lID~~G~i~~~~~ 159 (213)
T 2i81_A 96 ----SKYTHLAWKK-TPLAKGGIGNIKHTLL--SDITKSISK-DYNVLF-DD-S---VSLR---AFVLIDMNGIVQHLLV 159 (213)
T ss_dssp ----CHHHHHHHHS-SCGGGTCCCSCSSEEE--ECTTSHHHH-HTTCEE-TT-T---EECE---EEEEECTTSBEEEEEE
T ss_pred ----CHHHHHHHHH-HHHhhCCccCCCceEE--ECCchHHHH-HhCCcc-cc-C---Cccc---EEEEECCCCEEEEEEe
Confidence 6788888987 56 7899999 675543332 121100 00 0 1455 9999999999999976
Q ss_pred CCC
Q 031257 152 PTT 154 (163)
Q Consensus 152 g~~ 154 (163)
+..
T Consensus 160 ~~~ 162 (213)
T 2i81_A 160 NNL 162 (213)
T ss_dssp ECT
T ss_pred cCC
Confidence 644
No 61
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.94 E-value=1.2e-26 Score=161.21 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=109.1
Q ss_pred ccCCCccc-ceEEecCCCCeeeccccCCcEEEEEeccCCCC-CChhhHHHHHHHHHHhcC--CCeEEEEEecCCCCCCCC
Q 031257 6 IQNPESIF-DLSVKDARGHEVDLSTYKGKVLLIVNVASKCG-MTNSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEP 81 (163)
Q Consensus 6 ~~~~~~~p-~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~-~C~~~~~~l~~~~~~~~~--~~~~ii~is~d~~~~~~~ 81 (163)
+..|.++| +|++.+.+|+++++++++||++||+||++||+ .|..+++.|+++++++.+ .++.+++|++| + .
T Consensus 1 m~~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d----~-~ 75 (170)
T 3me7_A 1 MSLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFD----P-K 75 (170)
T ss_dssp -CTTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECC----T-T
T ss_pred CCCCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECC----C-C
Confidence 46899999 99999999999999999999999999999998 599999999999999975 46999999997 2 4
Q ss_pred CCHHHHHHHHHhhcCCccceeee-eecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC-CCcchh
Q 031257 82 GSNDQIADFVCTRFKSEFPIFEK-IDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT-TSLLSL 159 (163)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~-~~~~~~ 159 (163)
++.+.+++|++ +++..++.+.. ...+......+.......... -...+.+.|++||||++|+|++++.|. .+++++
T Consensus 76 d~~~~~~~~~~-~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i 153 (170)
T 3me7_A 76 DTLEDIKRFQK-EYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT-AGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEF 153 (170)
T ss_dssp CCHHHHHHHHH-HTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE-ETTEEECCCEEEEECTTSBEEEEEESSSCCHHHH
T ss_pred CCHHHHHHHHH-HcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec-CCCccccCceEEEECCCCeEEEEEeCCCCCHHHH
Confidence 78999999997 88987764310 111111111111111000000 002344556999999999999988776 356666
Q ss_pred hhc
Q 031257 160 EVI 162 (163)
Q Consensus 160 ~~~ 162 (163)
.+.
T Consensus 154 ~~~ 156 (170)
T 3me7_A 154 VNA 156 (170)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 62
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=4.1e-27 Score=162.24 Aligned_cols=132 Identities=15% Similarity=0.159 Sum_probs=104.9
Q ss_pred ccCCCcccceEEe--cCCC--Ceeeccc-cCCcEEEEEec-cCCCCCCh-hhHHHHHHHHHHhcCCCeE-EEEEecCCCC
Q 031257 6 IQNPESIFDLSVK--DARG--HEVDLST-YKGKVLLIVNV-ASKCGMTN-SNYIELSQLYDKYKDQGLE-ILAFPCNQFG 77 (163)
Q Consensus 6 ~~~~~~~p~f~l~--~~~G--~~~~l~~-~~gk~vlv~f~-~s~C~~C~-~~~~~l~~~~~~~~~~~~~-ii~is~d~~~ 77 (163)
+..|+++|+|++. +.+| +.+++++ ++||++||+|| ++||++|+ .+++.|++++++|+++|+. |++||.|
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d--- 80 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN--- 80 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS---
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC---
Confidence 6789999999986 8899 9999999 89999999999 89999999 9999999999999988999 9999985
Q ss_pred CCCCCCHHHHHHHHHhhcCC--ccceeeeeecCCCcchhHHHHhHhC-CCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 78 EEEPGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSG-KWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
+.+..++|++ +++. +||++ .|.++.... .|+..... ..|.....+| ++|||| +|+|++++.+.
T Consensus 81 -----~~~~~~~~~~-~~~~~~~~~~l--~D~~~~~~~-~~gv~~~~~~~g~~~~~~p---~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 81 -----DPFVMKAWAK-SYPENKHVKFL--ADGSATYTH-ALGLELDLQEKGLGTRSRR---FALLVD-DLKVKAANIEG 146 (162)
T ss_dssp -----CHHHHHHHHH-TCTTCSSEEEE--ECTTSHHHH-HTTCEEEETTTTSEEEECC---EEEEEE-TTEEEEEEECS
T ss_pred -----CHHHHHHHHH-hcCCCCCeEEE--ECCCchHHH-HcCcccccccCCCCcccee---EEEEEE-CCEEEEEEeeC
Confidence 6788999987 7888 89999 776654332 22211000 0010001245 999999 99999998765
No 63
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.94 E-value=6.2e-27 Score=166.66 Aligned_cols=131 Identities=13% Similarity=0.140 Sum_probs=103.9
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
.+..|.++|+|++.+.+|+.++|++++||++||+|| ++||++|+.+++.|++++++| +++.|++||.| +
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D--------~ 120 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD--------L 120 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC--------C
Confidence 477899999999999999999999999999999999 689999999999999999999 57999999975 6
Q ss_pred HHHHHHHHHhhcCC-ccceeeeeec-CCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 84 NDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
.+.+++|++ ++++ +||++ .|. ++.... .|+...... +..+...| ++||||++|+|++++.+.
T Consensus 121 ~~~~~~~~~-~~~~~~f~~l--~D~~~~~~~~-~ygv~~~~~-~~~g~~~p---~~~lID~~G~I~~~~~~~ 184 (200)
T 3zrd_A 121 PFAQSRFCG-AEGLSNVITL--STLRGADFKQ-AYGVAITEG-PLAGLTAR---AVVVLDGQDNVIYSELVN 184 (200)
T ss_dssp HHHHTTCTT-TTTCTTEEEE--ETTSCTHHHH-HTTCEECSS-TTTTSBCC---EEEEECTTSBEEEEEECS
T ss_pred HHHHHHHHH-HcCCCCceEE--ecCchHHHHH-HhCceeecc-cCCCcccc---EEEEECCCCeEEEEEecC
Confidence 888888987 7899 99999 676 443222 222211100 00001235 999999999999987643
No 64
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.94 E-value=2.4e-27 Score=162.64 Aligned_cols=132 Identities=13% Similarity=0.192 Sum_probs=106.2
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCc--EEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGK--VLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk--~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~ 80 (163)
..+..|.++|+|++.+.+|+.+++++++|| ++||+|| ++||++|+.+++.|+++++++++++ .|++|+.|
T Consensus 5 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d------ 77 (159)
T 2a4v_A 5 NELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD------ 77 (159)
T ss_dssp TCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC------
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC------
Confidence 357789999999999999999999999887 8999987 8999999999999999999999989 99999985
Q ss_pred CCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCc
Q 031257 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSL 156 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~ 156 (163)
+.+.+++|++ +++++||++ .|.++.... .|+....... ...| ++||| ++|+|++++.|..+.
T Consensus 78 --~~~~~~~~~~-~~~~~~~~l--~D~~~~~~~-~~gv~~~p~~----g~~~---~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 78 --SVTSQKKFQS-KQNLPYHLL--SDPKREFIG-LLGAKKTPLS----GSIR---SHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp --CHHHHHHHHH-HHTCSSEEE--ECTTCHHHH-HHTCBSSSSS----CBCC---EEEEE-ETTEEEEEEESCCHH
T ss_pred --CHHHHHHHHH-HhCCCceEE--ECCccHHHH-HhCCcccccC----Cccc---eEEEE-cCCEEEEEEccCCcc
Confidence 6788899987 789999999 675543332 2221110000 1233 89999 999999998886543
No 65
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.94 E-value=6.5e-27 Score=165.90 Aligned_cols=133 Identities=19% Similarity=0.254 Sum_probs=107.0
Q ss_pred ccccCCCcccceEEecC-CC--CeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDA-RG--HEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~-~G--~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~ 79 (163)
..+..|.++|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|+++++.+++|++|
T Consensus 3 ~~l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d----- 77 (197)
T 1qmv_A 3 GNARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD----- 77 (197)
T ss_dssp TTBCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred CcccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 45788999999999998 88 999999999999999999 9999999999999999999999889999999985
Q ss_pred CCCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.+...+|++ ++ +++||++ .|.++.... .|.......+ ..+| ++||||++|+|++++.|
T Consensus 78 ---~~~~~~~~~~-~~~~~~~~~~~~~p~l--~D~~~~~~~-~~gv~~~~~~----~~~P---~~~lid~~G~i~~~~~g 143 (197)
T 1qmv_A 78 ---SQFTHLAWIN-TPRKEGGLGPLNIPLL--ADVTRRLSE-DYGVLKTDEG----IAYR---GLFIIDGKGVLRQITVN 143 (197)
T ss_dssp ---CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTCHHHH-HTTCEETTTT----EECE---EEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HHHhhCCCCCCceEEE--ECCcHHHHH-HcCCccCCCC----ceee---EEEEECCCCcEEEEEeC
Confidence 5677888886 55 8899998 675543322 2211100000 1455 99999999999999877
Q ss_pred CCC
Q 031257 153 TTS 155 (163)
Q Consensus 153 ~~~ 155 (163)
..+
T Consensus 144 ~~~ 146 (197)
T 1qmv_A 144 DLP 146 (197)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 66
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.94 E-value=6.5e-27 Score=168.97 Aligned_cols=133 Identities=14% Similarity=0.238 Sum_probs=105.5
Q ss_pred cccCCCcccceEEecC---CCCeeeccccCCcEEEEEecc-CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDA---RGHEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~---~G~~~~l~~~~gk~vlv~f~~-s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~ 80 (163)
.+.+|.++|+|++.+. +|+++++++++||++||+||+ +||++|+.+++.|++++++|+++++.|++|++|
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D------ 112 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD------ 112 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 4678999999999965 559999999999999999996 999999999999999999999989999999985
Q ss_pred CCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 81 PGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
+.+...+|.. .+ +.+||++ .|.++.... .|....... +..+| ++||||++|+|++++.+.
T Consensus 113 --~~~~~~~~~~-~~~~~~~~~~~~~~~l--~D~~~~~~~-~ygv~~~~~----g~~~P---~~~lID~~G~I~~~~~g~ 179 (222)
T 3ztl_A 113 --SQYSHLAWDN-LDRKSGGLGHMKIPLL--ADRKQEISK-AYGVFDEED----GNAFR---GLFIIDPNGILRQITIND 179 (222)
T ss_dssp --CHHHHHHHHH-SCGGGTSCCSCSSCEE--ECSSSHHHH-HTTCBCTTT----SSBCE---EEEEECTTSEEEEEEEEC
T ss_pred --CHHHHHHHHH-HhhhhccccccceeEE--eCCchHHHH-HcCCeecCC----CCccc---eEEEECCCCeEEEEEecC
Confidence 6777888876 55 8899999 666543322 221110100 02455 999999999999998776
Q ss_pred CCc
Q 031257 154 TSL 156 (163)
Q Consensus 154 ~~~ 156 (163)
.+.
T Consensus 180 ~~~ 182 (222)
T 3ztl_A 180 KPV 182 (222)
T ss_dssp TTB
T ss_pred CCC
Confidence 544
No 67
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.94 E-value=5.6e-27 Score=165.57 Aligned_cols=128 Identities=19% Similarity=0.207 Sum_probs=104.2
Q ss_pred cCCCcccceEEecC--CC--Ceeecccc-CCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCC
Q 031257 7 QNPESIFDLSVKDA--RG--HEVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 7 ~~~~~~p~f~l~~~--~G--~~~~l~~~-~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~ 80 (163)
++|.++|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|+++++.+++|++|
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d------ 74 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD------ 74 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC------
Confidence 36899999999998 99 99999999 9999999999 9999999999999999999998888999999985
Q ss_pred CCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 81 PGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
+.+..++|++ ++ +++||++ .|.+..... .|+... .. +..+| ++||||++|+|++++.|.
T Consensus 75 --~~~~~~~~~~-~~~~~~~~~~~~~~~l--~D~~~~~~~-~~gv~~-~~----g~~~P---~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 75 --SKFTHLAWKK-TPLSQGGIGNIKHTLI--SDISKSIAR-SYDVLF-NE----SVALR---AFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp --CHHHHHHHHT-SCGGGTCCCSCSSEEE--ECTTSHHHH-HTTCEE-TT----TEECC---EEEEECTTSBEEEEEEGG
T ss_pred --CHHHHHHHHH-hHHhhCCccCCCcCeE--ECCcHHHHH-HhCCcC-cC----Cceee---EEEEEcCCCEEEEEEeCC
Confidence 6788888887 66 7899998 665543322 121100 00 01466 999999999999998764
Q ss_pred C
Q 031257 154 T 154 (163)
Q Consensus 154 ~ 154 (163)
.
T Consensus 141 ~ 141 (192)
T 2h01_A 141 L 141 (192)
T ss_dssp G
T ss_pred C
Confidence 3
No 68
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.94 E-value=5.2e-27 Score=171.36 Aligned_cols=133 Identities=14% Similarity=0.186 Sum_probs=105.3
Q ss_pred ccccCCCcccceEEecC---CCCeeeccccCCcEEEEEecc-CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDA---RGHEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~---~G~~~~l~~~~gk~vlv~f~~-s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~ 79 (163)
..+..|.++|+|++.+. +|+.++|++++||++||+||+ +||++|+.+++.|++++++|+++|+.|++||+|
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D----- 120 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD----- 120 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS-----
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 34678999999998754 467999999999999999998 999999999999999999999999999999985
Q ss_pred CCCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.+..++|+. ++ +++||++ .|.++.... .|.......+ ..+| ++||||++|+|++++.+
T Consensus 121 ---~~~~~~~~~~-~~~~~~~~~~~~fp~l--~D~~~~v~~-~ygv~~~~~g----~~~p---~~flID~~G~I~~~~~~ 186 (240)
T 3qpm_A 121 ---SQFTHLAWII-TPRKQGGLGPMKIPLL--SDLTHQISK-DYGVYLEDQG----HTLR---GLFIIDEKGVLRQITMN 186 (240)
T ss_dssp ---CHHHHHHHHH-SCGGGTCCCSCSSCEE--ECTTSHHHH-HTTCEETTTT----EECE---EEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HHHhhcCCCCCceeEE--eCchHHHHH-HhCCccccCC----Cccc---eEEEEcCCCeEEEEEec
Confidence 6788888886 54 7899999 776654332 2222111110 1345 99999999999999765
Q ss_pred CCC
Q 031257 153 TTS 155 (163)
Q Consensus 153 ~~~ 155 (163)
..+
T Consensus 187 ~~~ 189 (240)
T 3qpm_A 187 DLP 189 (240)
T ss_dssp CTT
T ss_pred CCC
Confidence 443
No 69
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=8.3e-27 Score=161.62 Aligned_cols=132 Identities=11% Similarity=0.129 Sum_probs=104.6
Q ss_pred ccCCCcccceEEe-cCCCCeeecccc-CCcEEEEEec-cCCCCCChh-hHHHHHHHHHHhcCCCe-EEEEEecCCCCCCC
Q 031257 6 IQNPESIFDLSVK-DARGHEVDLSTY-KGKVLLIVNV-ASKCGMTNS-NYIELSQLYDKYKDQGL-EILAFPCNQFGEEE 80 (163)
Q Consensus 6 ~~~~~~~p~f~l~-~~~G~~~~l~~~-~gk~vlv~f~-~s~C~~C~~-~~~~l~~~~~~~~~~~~-~ii~is~d~~~~~~ 80 (163)
+..|+++|+|++. +.+|+.++|+++ +||++||+|| ++|||+|+. ++|.|++++++|+++|+ .|++||.|
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d------ 76 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN------ 76 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 6789999999999 999999999998 9998888876 999999999 99999999999998899 99999975
Q ss_pred CCCHHHHHHHHHhhcCCc--cceeeeeecCCCcchhHHHHhHhC--CCcccCCccccCeeEEEECCCCcEEEEeCCCC
Q 031257 81 PGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSG--KWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT 154 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~ 154 (163)
+.+..++|++ +++++ ||++ .|.++.... .|+..... ..|. ....| ++||| ++|+|++++.+..
T Consensus 77 --~~~~~~~~~~-~~~~~~~fp~l--~D~~~~~~~-~~gv~~~~~~~~g~-~~~~p---~t~lI-~~G~I~~~~~~~~ 143 (167)
T 2wfc_A 77 --DSFVMDAWGK-AHGADDKVQML--ADPGGAFTK-AVDMELDLSAVLGN-VRSKR---YSLVI-EDGVVTKVNVEPD 143 (167)
T ss_dssp --CHHHHHHHHH-HTTCTTTSEEE--ECTTSHHHH-HTTCEECCHHHHSS-CEECC---EEEEE-ETTEEEEEEECTT
T ss_pred --CHHHHHHHHH-hcCCCcceEEE--ECCCCcHHH-HcCCccccccccCc-ccceE---EEEEE-eCCEEEEEEecCC
Confidence 6788899987 78898 9999 776654433 12111000 0000 01235 99999 9999999977653
No 70
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.94 E-value=5.7e-27 Score=157.90 Aligned_cols=137 Identities=18% Similarity=0.228 Sum_probs=113.7
Q ss_pred ccCCCcccceEE--ecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 6 IQNPESIFDLSV--KDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 6 ~~~~~~~p~f~l--~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
++.|.++|+|++ .+.+|+.+++++++||++||.||++||++|+.+++.|++++++++++ +.+++|++|... ...+
T Consensus 1 l~~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~--~~~~ 77 (148)
T 2b5x_A 1 MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSE--DDLD 77 (148)
T ss_dssp CCTTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCST--TTSS
T ss_pred CCCCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCc--cccC
Confidence 468999999999 78899999999999999999999999999999999999999999887 999999987321 1237
Q ss_pred HHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+.+++++. +++.+||++ .|.+..... . .|+ .++| +++|+|++|++++++.|..+.+++.+.
T Consensus 78 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~----~-----~~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 139 (148)
T 2b5x_A 78 PGKIKETAA-EHDITQPIF--VDSDHALTD----A-----FEN--EYVP---AYYVFDKTGQLRHFQAGGSGMKMLEKR 139 (148)
T ss_dssp HHHHHHHHH-HTTCCSCEE--ECSSCHHHH----H-----TCC--CCSS---EEEEECTTCBEEEEEESCSTTHHHHHH
T ss_pred HHHHHHHHH-HcCCCcceE--ECCchhHHH----H-----hCC--CCCC---EEEEECCCCcEEEEecCCCCHHHHHHH
Confidence 889999997 899999998 665543222 1 133 4556 999999999999999998887777654
No 71
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.94 E-value=1.3e-26 Score=161.49 Aligned_cols=130 Identities=9% Similarity=0.045 Sum_probs=98.0
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCC-CCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASK-CGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~-C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
..+..|.++|+|++.+.+|+.+++++++||++||+||++| |++|+.+++.|++++++ .++.+++|+.|
T Consensus 16 ~~l~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D-------- 84 (175)
T 1xvq_A 16 ELPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD-------- 84 (175)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS--------
T ss_pred CCCCcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC--------
Confidence 3467899999999999999999999999999999999999 99999999999999998 56999999985
Q ss_pred CHHHHHHHHHhhcCC-ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 83 SNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.+.+++|++ ++++ +|+++ .|.+..... .|....... +..+...| ++||||++|+|++++.|
T Consensus 85 ~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~-~~gv~~~~~-~~~g~~~p---~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 85 LPFAQKRFCG-AEGTENVMPA--SAFRDSFGE-DYGVTIADG-PMAGLLAR---AIVVIGADGNVAYTELV 147 (175)
T ss_dssp CHHHHTTCC-------CEEEE--ECTTSSHHH-HTTCBBCSS-TTTTSBCS---EEEEECTTSBEEEEEEC
T ss_pred CHHHHHHHHH-HcCCCCceEe--eCCHHHHHH-HhCCccccc-ccCCcccc---eEEEECCCCeEEEEEEC
Confidence 6778888887 7888 89998 676544332 222110000 00001234 99999999999999863
No 72
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.94 E-value=8.9e-27 Score=171.32 Aligned_cols=132 Identities=12% Similarity=0.168 Sum_probs=105.9
Q ss_pred ccccCCCcccceEEec---CCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCC
Q 031257 4 QFIQNPESIFDLSVKD---ARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~---~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~ 79 (163)
..+.+|.++|+|++.+ .+|+.++|++++||++||+|| ++||++|+.+++.|++++++|+++|+.|++|++|
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D----- 134 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD----- 134 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred cccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC-----
Confidence 4467899999999774 467899999999999999999 8999999999999999999999999999999985
Q ss_pred CCCCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.+...+|++ .+ +++||++ .|.++.... .|.......+ ..+| ++||||++|+|++++.+
T Consensus 135 ---~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~va~-~ygv~~~~~g----~~~p---~tflID~~G~I~~~~~~ 200 (254)
T 3tjj_A 135 ---SQFTHLAWIN-TPRRQGGLGPIRIPLL--SDLTHQISK-DYGVYLEDSG----HTLR---GLFIIDDKGILRQITLN 200 (254)
T ss_dssp ---CHHHHHHHHT-SCGGGTSCCSCSSCEE--ECTTSHHHH-HHTCEETTTT----EECE---EEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HHHHhcCCccccccee--eCcHHHHHH-HcCCccccCC----Cccc---eEEEECCCCeEEEEEec
Confidence 6788888886 55 7899999 776654332 2322111111 2355 99999999999999765
Q ss_pred CC
Q 031257 153 TT 154 (163)
Q Consensus 153 ~~ 154 (163)
..
T Consensus 201 ~~ 202 (254)
T 3tjj_A 201 DL 202 (254)
T ss_dssp CT
T ss_pred CC
Confidence 44
No 73
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=1.5e-26 Score=158.33 Aligned_cols=128 Identities=18% Similarity=0.324 Sum_probs=107.2
Q ss_pred cccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 3 SQFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
...+.+|..+|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|+++++++++.++.+++|++|.
T Consensus 12 ~~~~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------- 84 (158)
T 3hdc_A 12 APLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK------- 84 (158)
T ss_dssp SCCCCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS-------
T ss_pred CcccCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH-------
Confidence 3457789999999999999999999999999999999999999999999999999999998889999999862
Q ss_pred CHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcc
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLL 157 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~ 157 (163)
.+++++. +++.+|+++ .|.+..... .. |+ .++| ++||||++|+|++++.|..+.+
T Consensus 85 ---~~~~~~~-~~~~~~~~~--~d~~~~~~~----~~-----~v--~~~P---~~~lid~~G~i~~~~~G~~~~~ 139 (158)
T 3hdc_A 85 ---RFPEKYR-RAPVSFNFL--SDATGQVQQ----RY-----GA--NRLP---DTFIVDRKGIIRQRVTGGIEWD 139 (158)
T ss_dssp ---SCCGGGG-GCCCSCEEE--ECTTSHHHH----HT-----TC--CSSS---EEEEECTTSBEEEEEESCCCTT
T ss_pred ---HHHHHHH-HcCCCceEE--ECchHHHHH----Hh-----CC--CCcc---eEEEEcCCCCEEEEEeCCCccc
Confidence 4556665 789999998 665543221 11 33 5566 9999999999999999877543
No 74
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.94 E-value=5.3e-26 Score=150.89 Aligned_cols=132 Identities=17% Similarity=0.274 Sum_probs=108.3
Q ss_pred cccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHH
Q 031257 11 SIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADF 90 (163)
Q Consensus 11 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~ 90 (163)
++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|+++++++++ ++.+++|+.+.. ...++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~--~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGH--KGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTS--TTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCC--CchhhHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999544 599999965422 234688899999
Q ss_pred HHhhcCC-ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 91 VCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 91 ~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+. +++. +|+++ .|.+..... .. |+ .++| +++|+|++|+|++++.|..+.+++.+.
T Consensus 78 ~~-~~~~~~~~~~--~d~~~~~~~----~~-----~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 133 (138)
T 4evm_A 78 YK-GLDYKNLPVL--VDPSGKLLE----TY-----GV--RSYP---TQAFIDKEGKLVKTHPGFMEKDAILQT 133 (138)
T ss_dssp HT-TCCCTTCCEE--ECTTCHHHH----HT-----TC--CSSS---EEEEECTTCCEEEEEESCCCHHHHHHH
T ss_pred Hh-hcCCCCeeEE--ECcchHHHH----Hc-----Cc--ccCC---eEEEECCCCcEEEeecCCCcHHHHHHH
Confidence 97 7788 99998 665543222 11 33 4556 999999999999999998888877664
No 75
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.94 E-value=4.1e-26 Score=151.49 Aligned_cols=128 Identities=17% Similarity=0.185 Sum_probs=108.2
Q ss_pred CCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHH
Q 031257 8 NPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQI 87 (163)
Q Consensus 8 ~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~ 87 (163)
.|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++ ++.+++|+++ ++.+.+
T Consensus 1 ~~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~ 71 (136)
T 1zzo_A 1 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGL-------DQVPAM 71 (136)
T ss_dssp CCCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHH
T ss_pred CCCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCC-------CCHHHH
Confidence 3678999999999999999999999999999999999999999999999999997 6999999986 578899
Q ss_pred HHHHHhhcCC-ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 88 ADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 88 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++++. +++. +||++ .|.+..... .+ |+ .++| +++|+|++|+++ ++.|..+.+++.+.
T Consensus 72 ~~~~~-~~~~~~~~~~--~d~~~~~~~----~~-----~i--~~~P---~~~~id~~g~i~-~~~g~~~~~~l~~~ 129 (136)
T 1zzo_A 72 QEFVN-KYPVKTFTQL--ADTDGSVWA----NF-----GV--TQQP---AYAFVDPHGNVD-VVRGRMSQDELTRR 129 (136)
T ss_dssp HHHHH-HTTCTTSEEE--ECTTCHHHH----HT-----TC--CSSS---EEEEECTTCCEE-EEESCCCHHHHHHH
T ss_pred HHHHH-HcCCCceEEE--EcCCcHHHH----Hc-----CC--CCCc---eEEEECCCCCEE-EEecCCCHHHHHHH
Confidence 99987 7888 99998 665433221 11 33 5566 999999999999 88888887777654
No 76
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.94 E-value=3.5e-26 Score=152.09 Aligned_cols=126 Identities=14% Similarity=0.174 Sum_probs=107.2
Q ss_pred CcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHH
Q 031257 10 ESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIAD 89 (163)
Q Consensus 10 ~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~ 89 (163)
.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++++++++ ++.+++|+++ ++.+.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~~~ 72 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATR-------ADVGAMQS 72 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcC-------CCHHHHHH
Confidence 46899999999999999999999999999999999999999999999999997 6999999986 46889999
Q ss_pred HHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeC---CCCCcchhhhc
Q 031257 90 FVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY---PTTSLLSLEVI 162 (163)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~---g~~~~~~~~~~ 162 (163)
|+. +++.+|+++ .|.+..... . .|+ .++| +++|+|++|+++ ++. |..+.+++.+.
T Consensus 73 ~~~-~~~~~~~~~--~d~~~~~~~----~-----~~i--~~~P---~~~lid~~G~i~-~~~~~~g~~~~~~l~~~ 130 (136)
T 1lu4_A 73 FVS-KYNLNFTNL--NDADGVIWA----R-----YNV--PWQP---AFVFYRADGTST-FVNNPTAAMSQDELSGR 130 (136)
T ss_dssp HHH-HHTCCSEEE--ECTTSHHHH----H-----TTC--CSSS---EEEEECTTSCEE-EECCSSSCCCHHHHHHH
T ss_pred HHH-HcCCCceEE--ECCchhHHH----h-----cCC--CCCC---EEEEECCCCcEE-EEEcCCCccCHHHHHHH
Confidence 987 789999998 665543222 1 133 5566 999999999999 888 88887777654
No 77
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.94 E-value=3.3e-26 Score=162.74 Aligned_cols=147 Identities=16% Similarity=0.123 Sum_probs=106.0
Q ss_pred ccCCCcc--cceEEecCCCCeeeccccCCcEEEEEeccCCCCC-ChhhHHHHHHHHHHhcC---CCeEEEEEecCCCCCC
Q 031257 6 IQNPESI--FDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKD---QGLEILAFPCNQFGEE 79 (163)
Q Consensus 6 ~~~~~~~--p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~-C~~~~~~l~~~~~~~~~---~~~~ii~is~d~~~~~ 79 (163)
...|.++ |+|++.+.+|+.+++++++||++||+||++||++ |+.+++.|+++++++.+ .++.+++|++| +
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D----~ 88 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD----P 88 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC----T
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC----C
Confidence 4457775 9999999999999999999999999999999997 99999999999998874 37999999987 2
Q ss_pred CCCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhC--CC-----cccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 80 EPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSG--KW-----GIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~-----~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.++.+.+++|+. +++.+|+.+ .+.... ...+...+... .+ |. ...+.+.|++||||++|+|++++.|
T Consensus 89 ~~d~~~~~~~~~~-~~~~~~~~l--~~~~d~-~~~~~~~~gv~~~~p~~~~~~~-~~~~~~~~~~~liD~~G~i~~~~~g 163 (200)
T 2b7k_A 89 ARDSPAVLKEYLS-DFHPSILGL--TGTFDE-VKNACKKYRVYFSTPPNVKPGQ-DYLVDHSIFFYLMDPEGQFVDALGR 163 (200)
T ss_dssp TTCCHHHHHHHHT-TSCTTCEEE--ECCHHH-HHHHHHHTTC---------------CTTTCCCEEEECTTSCEEEEECT
T ss_pred CCCCHHHHHHHHH-HcCCCceEE--eCCHHH-HHHHHHHcCcEEeeccccCCCC-CceeeecceEEEECCCCcEEEEeCC
Confidence 3467889999987 788888877 321110 01111111000 00 00 0113355699999999999999988
Q ss_pred CCCcchhhh
Q 031257 153 TTSLLSLEV 161 (163)
Q Consensus 153 ~~~~~~~~~ 161 (163)
..+++++.+
T Consensus 164 ~~~~~~~~~ 172 (200)
T 2b7k_A 164 NYDEKTGVD 172 (200)
T ss_dssp TCCTTHHHH
T ss_pred CCCHHHHHH
Confidence 777655543
No 78
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.94 E-value=1.1e-26 Score=160.02 Aligned_cols=135 Identities=21% Similarity=0.314 Sum_probs=109.2
Q ss_pred ccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCC----------
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQ---------- 75 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~---------- 75 (163)
..+|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|.+++++++ ++.|++|++|.
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~ 88 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLN 88 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCC
T ss_pred ccccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccc
Confidence 456889999999999999999999999999999999999999999999999999998 69999999861
Q ss_pred -CCCCCCCCHHHHHHHHHhhcCC-ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 76 -FGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
...+..++.+.+++|+. ++++ +|+++ .| +.... ..+ ++ .++| ++||||++|+|++ .|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~d-~~~~~----~~~-----~v--~~~P---~~~lid~~G~i~~--~g~ 148 (165)
T 3ha9_A 89 KPGYPPPDTPEMFRKFIA-NYGDPSWIMV--MD-DGSLV----EKF-----NV--RSID---YIVIMDKSSNVLY--AGT 148 (165)
T ss_dssp STTSCCCCCHHHHHHHHH-HHSCTTSEEE--EC-CSHHH----HHT-----TC--CSSS---EEEEEETTCCEEE--EEE
T ss_pred cccCCCCCCHHHHHHHHH-HcCCCCeeEE--eC-hHHHH----HHh-----CC--CCce---EEEEEcCCCcEEE--eCC
Confidence 22233368899999997 7899 99999 66 33222 211 33 4556 9999999999998 555
Q ss_pred C-Ccchhhhc
Q 031257 154 T-SLLSLEVI 162 (163)
Q Consensus 154 ~-~~~~~~~~ 162 (163)
. +.+++++.
T Consensus 149 ~~~~~~l~~~ 158 (165)
T 3ha9_A 149 TPSLGELESV 158 (165)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 5 66666553
No 79
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1e-26 Score=177.99 Aligned_cols=140 Identities=20% Similarity=0.276 Sum_probs=116.4
Q ss_pred ccccCCCcccceE-----EecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCC
Q 031257 4 QFIQNPESIFDLS-----VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGE 78 (163)
Q Consensus 4 ~~~~~~~~~p~f~-----l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~ 78 (163)
..+..|.++|+|+ +.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.|++|++|...
T Consensus 49 ~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~- 127 (352)
T 2hyx_A 49 AQLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA- 127 (352)
T ss_dssp SSCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG-
T ss_pred cccCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc-
Confidence 3467899999999 9999999999999999999999999999999999999999999999888999999986321
Q ss_pred CCCCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcch
Q 031257 79 EEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLS 158 (163)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~ 158 (163)
..++.+.+++|++ +++++||++ .|.+.... .. .++ ..+| ++||||++|+|++++.|..+.++
T Consensus 128 -~~d~~~~~~~~~~-~~~l~fpv~--~D~~~~l~----~~-----ygV--~~~P---t~~lID~~G~Iv~~~~G~~~~~~ 189 (352)
T 2hyx_A 128 -FEKVPGNVAKGAA-NLGISYPIA--LDNNYATW----TN-----YRN--RYWP---AEYLIDATGTVRHIKFGEGDYNV 189 (352)
T ss_dssp -GGGCHHHHHHHHH-HHTCCSCEE--ECTTSHHH----HH-----TTC--CEES---EEEEECTTSBEEEEEESBCCHHH
T ss_pred -ccCCHHHHHHHHH-HcCCCccEE--eCCcHHHH----HH-----cCC--CccC---EEEEEeCCCeEEEEEcCCCCHHH
Confidence 1257889999997 899999998 66543322 11 133 4556 99999999999999999877776
Q ss_pred hhhc
Q 031257 159 LEVI 162 (163)
Q Consensus 159 ~~~~ 162 (163)
+.+.
T Consensus 190 l~~~ 193 (352)
T 2hyx_A 190 TETL 193 (352)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 80
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.94 E-value=2.5e-26 Score=166.14 Aligned_cols=132 Identities=14% Similarity=0.184 Sum_probs=102.5
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCc-E-EEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGK-V-LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk-~-vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~ 82 (163)
.+..|..+|+|++.+.+| .+++++++|+ + +|++||++|||+|..+++.|++++++|+++|+.+|+||+|
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D-------- 74 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID-------- 74 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------
T ss_pred cCCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC--------
Confidence 378999999999999999 9999999987 4 5666789999999999999999999999999999999986
Q ss_pred CHHHHHHHHHhh----------cCCccceeeeeecCCCcchhHHHHhHhCC---CcccCCccccCeeEEEECCCCcEEEE
Q 031257 83 SNDQIADFVCTR----------FKSEFPIFEKIDVNGEHASPLYKLLKSGK---WGIFGDDIQWNFAKFLVDKNGQVVDR 149 (163)
Q Consensus 83 ~~~~~~~~~~~~----------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~~ip~~~~~~lid~~G~i~~~ 149 (163)
+.+..++|++ . ++++||++ .|.++.... .|+...... .| +...+| ++||||++|+|++.
T Consensus 75 ~~~~~~~~~~-~i~~~~~~~~~~~~~fpil--~D~~~~va~-~ygv~~~~~~~~~g-~~~~~p---~~fiID~~G~I~~~ 146 (224)
T 1prx_A 75 SVEDHLAWSK-DINAYNSEEPTEKLPFPII--DDRNRELAI-LLGMLDPAEKDEKG-MPVTAR---VVFVFGPDKKLKLS 146 (224)
T ss_dssp CHHHHHHHHH-HHHHHTTSCCCSCCSSCEE--ECTTCHHHH-HTTSSCSCTTCSSS-CCTTCC---EEEEECTTSBEEEE
T ss_pred CHHHHHHHHH-HHHHhhCcccccCcCccee--ecCchHHHH-HhCCCCcccccCCC-ccccce---EEEEECCCCEEEEE
Confidence 5666777775 3 78999999 776554332 232211100 01 012356 99999999999999
Q ss_pred eCCC
Q 031257 150 YYPT 153 (163)
Q Consensus 150 ~~g~ 153 (163)
+.+.
T Consensus 147 ~~~~ 150 (224)
T 1prx_A 147 ILYP 150 (224)
T ss_dssp EECC
T ss_pred EecC
Confidence 7654
No 81
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.93 E-value=1.3e-26 Score=162.96 Aligned_cols=133 Identities=15% Similarity=0.112 Sum_probs=104.3
Q ss_pred ccCCCcccceEEecC--CC-Ceeeccc-cCCcE-EEEEeccCCCCCChh-hHHHHHHHHHHhcCCCeE-EEEEecCCCCC
Q 031257 6 IQNPESIFDLSVKDA--RG-HEVDLST-YKGKV-LLIVNVASKCGMTNS-NYIELSQLYDKYKDQGLE-ILAFPCNQFGE 78 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G-~~~~l~~-~~gk~-vlv~f~~s~C~~C~~-~~~~l~~~~~~~~~~~~~-ii~is~d~~~~ 78 (163)
+++|.++|+|++.+. +| +.+++++ ++||+ +|++||++|||+|+. +++.|++++++|+++|+. |++||.|
T Consensus 26 l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d---- 101 (184)
T 3uma_A 26 IAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN---- 101 (184)
T ss_dssp CCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS----
T ss_pred CCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC----
Confidence 678999999999998 99 9999999 89985 566677999999999 799999999999999999 9999985
Q ss_pred CCCCCHHHHHHHHHhhcCCc--cceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 79 EEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
+.+..++|++ +++++ ||++ .|.++..+. .|+...... ..+.+++..|++|||| +|+|++.+.+.
T Consensus 102 ----~~~~~~~f~~-~~~~~~~fp~l--~D~~~~va~-~yGv~~~~~--~~g~g~~~~r~tfiId-dG~I~~~~~~~ 167 (184)
T 3uma_A 102 ----DLHVMGAWAT-HSGGMGKIHFL--SDWNAAFTK-AIGMEIDLS--AGTLGIRSKRYSMLVE-DGVVKALNIEE 167 (184)
T ss_dssp ----CHHHHHHHHH-HHTCTTTSEEE--ECTTCHHHH-HTTCEEEEG--GGTCEEEECCEEEEEE-TTEEEEEEECS
T ss_pred ----CHHHHHHHHH-HhCCCCceEEE--EcCchHHHH-HcCCceecc--ccCCcccceeEEEEEC-CCEEEEEEEeC
Confidence 6788899987 78998 9999 887765543 222211100 0001122233899997 99999998765
No 82
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.93 E-value=1.7e-26 Score=157.10 Aligned_cols=136 Identities=17% Similarity=0.280 Sum_probs=112.6
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCH
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~ 84 (163)
.+.+|.++|+|++.+.+|+.+++++++ |++||.||++||++|+.+++.|+++++++ ++.+++|++| ..++.
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d-----~~~~~ 74 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISRE-----PRDTR 74 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECC-----TTCCH
T ss_pred cCCCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCC-----CcccH
Confidence 578999999999999999999999999 99999999999999999999999999999 5999999985 23688
Q ss_pred HHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhcC
Q 031257 85 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (163)
+.+++|++ +++.+||++ .|..... ..+. ...|+ .++| ++||||++|+|++++.|..+.+++++.|
T Consensus 75 ~~~~~~~~-~~~~~~~~~--~d~~~~~-~~~~-----~~~~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~l 139 (154)
T 3ia1_A 75 EVVLEYMK-TYPRFIPLL--ASDRDRP-HEVA-----ARFKV--LGQP---WTFVVDREGKVVALFAGRAGREALLDAL 139 (154)
T ss_dssp HHHHHHHT-TCTTEEECB--CCSSCCH-HHHH-----TTSSB--CSSC---EEEEECTTSEEEEEEESBCCHHHHHHHH
T ss_pred HHHHHHHH-HcCCCcccc--cccccch-HHHH-----HHhCC--Cccc---EEEEECCCCCEEEEEcCCCCHHHHHHHH
Confidence 99999997 899999998 5522211 1111 11233 4555 9999999999999999988888877653
No 83
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=3.5e-28 Score=166.54 Aligned_cols=136 Identities=18% Similarity=0.313 Sum_probs=109.7
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHH-HHHHhc-CCCeEEEEEecCCCCCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQ-LYDKYK-DQGLEILAFPCNQFGEEEP 81 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~-~~~~~~-~~~~~ii~is~d~~~~~~~ 81 (163)
..+..|.++|+|++.+.+|+.+++++++||++||.||++||++|+.+++.|++ ++++++ +.++.+++|++|
T Consensus 5 ~~l~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d------- 77 (159)
T 2ls5_A 5 YIVRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRD------- 77 (159)
Confidence 34678999999999999999999999999999999999999999999999998 999888 668999999986
Q ss_pred CCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhh
Q 031257 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEV 161 (163)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (163)
++.+.+++|.. +++.+||++ .|.++.... .|.. .. .++| ++||||++|+|++++.| .+++++.+
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~~~------~~--~~~P---~~~lid~~G~i~~~~~g-~~~~~l~~ 141 (159)
T 2ls5_A 78 EPLEKVLAFAK-STGVTYPLG--LDPGADIFA-KYAL------RD--AGIT---RNVLIDREGKIVKLTRL-YNEEEFAS 141 (159)
Confidence 34566788876 789999999 666554432 1211 01 3466 99999999999998877 34445544
Q ss_pred c
Q 031257 162 I 162 (163)
Q Consensus 162 ~ 162 (163)
.
T Consensus 142 ~ 142 (159)
T 2ls5_A 142 L 142 (159)
Confidence 3
No 84
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.93 E-value=3.7e-26 Score=163.65 Aligned_cols=132 Identities=17% Similarity=0.210 Sum_probs=106.7
Q ss_pred CccccccCCCcccceEE----ecCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCC
Q 031257 1 MTSQFIQNPESIFDLSV----KDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQ 75 (163)
Q Consensus 1 m~~~~~~~~~~~p~f~l----~~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~ 75 (163)
|......+|++||+|++ .+.+|++++|++|+||++||+|| +.|||.|..|+..|++.+.+|+++|+.|++||+|
T Consensus 21 m~~~~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~D- 99 (219)
T 3tue_A 21 MSCGNAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSID- 99 (219)
T ss_dssp ---CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESS-
T ss_pred CcccccccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCC-
Confidence 33444678999999994 46788999999999999999999 7899999999999999999999999999999985
Q ss_pred CCCCCCCCHHHHHHHHHhh------cCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEE
Q 031257 76 FGEEEPGSNDQIADFVCTR------FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDR 149 (163)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~ 149 (163)
+....++|..+. .+++||++ .|.++.... .|+.+....+ ...+ .+||||++|+|++.
T Consensus 100 -------s~~sh~~w~~~~~~~~~~~~l~fpll--sD~~~~va~-~yGv~~~~~g----~~~R---~tFiIDp~g~Ir~~ 162 (219)
T 3tue_A 100 -------SEYAHLQWTLQDRKKGGLGTMAIPIL--ADKTKNIAR-SYGVLEESQG----VAYR---GLFIIDPHGMLRQI 162 (219)
T ss_dssp -------CHHHHHHHHHSCGGGTCCCSCSSCEE--ECTTSHHHH-HTTCEETTTT----EECE---EEEEECTTSBEEEE
T ss_pred -------chhhHHHHhhhhHHhcCccccccccc--cCcccHHHH-HcCCcccCCC----eeEE---EEEEECCCCeEEEE
Confidence 788888887521 25789999 888876654 4554433332 4456 89999999999987
Q ss_pred e
Q 031257 150 Y 150 (163)
Q Consensus 150 ~ 150 (163)
+
T Consensus 163 ~ 163 (219)
T 3tue_A 163 T 163 (219)
T ss_dssp E
T ss_pred E
Confidence 5
No 85
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.93 E-value=2e-26 Score=159.07 Aligned_cols=128 Identities=16% Similarity=0.179 Sum_probs=101.7
Q ss_pred cccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCC-CCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASK-CGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~-C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
.+..|.++|+|++.+.+|+.+++++++||++||.||++| |++|+.+++.|+++++++ .++.+++|+.| +
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d--------~ 86 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD--------L 86 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS--------S
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC--------C
Confidence 467899999999999999999999999999999999999 999999999999999999 56999999985 5
Q ss_pred HHHHHHHHHhhcCC-ccceeeeee-cCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 84 NDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
.+.+++|++ +++. +||++ .| .++.... .|...... .| ...| ++||||++|+|++++.|.
T Consensus 87 ~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~-~~~v~~~~-~g---~~~p---~~~lid~~G~i~~~~~g~ 147 (167)
T 2jsy_A 87 PFAQARWCG-ANGIDKVETL--SDHRDMSFGE-AFGVYIKE-LR---LLAR---SVFVLDENGKVVYAEYVS 147 (167)
T ss_dssp GGGTSCCGG-GSSCTTEEEE--EGGGTCHHHH-HTTCBBTT-TC---SBCC---EEEEECTTSCEEEEEECS
T ss_pred HHHHHHHHH-hcCCCCceEe--eCCchhHHHH-HhCCcccc-CC---ceee---EEEEEcCCCcEEEEEecC
Confidence 567788886 7888 89998 66 4433221 11110000 00 1135 999999999999998653
No 86
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.93 E-value=1.5e-25 Score=154.68 Aligned_cols=132 Identities=15% Similarity=0.194 Sum_probs=108.2
Q ss_pred cccCCCcccceEEecC--CCCeeecccc-CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDA--RGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~--~G~~~~l~~~-~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~ 81 (163)
.+..|.++|+|++.+. +|+.++++++ +||++||+||++||++|+.+++.|++++++ ++.+++|+++
T Consensus 21 ~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~------- 89 (168)
T 2b1k_A 21 SALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYK------- 89 (168)
T ss_dssp CTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEES-------
T ss_pred ccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECC-------
Confidence 3568999999999999 9999999985 899999999999999999999999999875 6999999986
Q ss_pred CCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhh
Q 031257 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEV 161 (163)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (163)
++.+.+++|+. +++.+|+.+. .|.+..... .| |+ .++| ++||||++|++++++.|..+.+++.+
T Consensus 90 ~~~~~~~~~~~-~~~~~~~~~~-~d~~~~~~~-~~--------~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~ 153 (168)
T 2b1k_A 90 DDRQKAISWLK-ELGNPYALSL-FDGDGMLGL-DL--------GV--YGAP---ETFLIDGNGIIRYRHAGDLNPRVWEE 153 (168)
T ss_dssp CCHHHHHHHHH-HHCCCCSEEE-EETTCHHHH-HH--------TC--CSSS---EEEEECTTSBEEEEEESCCCHHHHHH
T ss_pred CChHHHHHHHH-HcCCCCceee-ECcchHHHH-Hc--------Cc--cccC---EEEEECCCCeEEEEEeCCCCHHHHHH
Confidence 57888999987 8899999531 455433222 11 33 5566 99999999999999999888877765
Q ss_pred cC
Q 031257 162 IL 163 (163)
Q Consensus 162 ~l 163 (163)
.|
T Consensus 154 ~l 155 (168)
T 2b1k_A 154 EI 155 (168)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 87
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.93 E-value=1e-26 Score=160.81 Aligned_cols=144 Identities=15% Similarity=0.213 Sum_probs=109.4
Q ss_pred cCCCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCC-ChhhHHHHHHHHHHhcCC---CeEEEEEecCCCCCCCCC
Q 031257 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKDQ---GLEILAFPCNQFGEEEPG 82 (163)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~-C~~~~~~l~~~~~~~~~~---~~~ii~is~d~~~~~~~~ 82 (163)
..|.++|+|++.+.+| .+++++++||++||+||++||++ |+.+++.|++++++++++ ++.+++|++|. +.+
T Consensus 11 ~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~----~~d 85 (172)
T 2k6v_A 11 LLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP----ERD 85 (172)
T ss_dssp EEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT----TTC
T ss_pred ccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC----CCC
Confidence 3578899999999999 99999999999999999999997 999999999999999865 69999999872 346
Q ss_pred CHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCC-------CcccCCccccCeeEEEECCCCcEEEEeCCCC-
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGK-------WGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT- 154 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-------~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~- 154 (163)
+.+.+++|+. +++.+|+++ .|..... ..+...+.... .+. ..+.+.|++|||| +|+|++++.|..
T Consensus 86 ~~~~~~~~~~-~~~~~~~~l--~d~~~~~-~~~~~~~gv~~~~~~~~~~~~--~~i~~~P~~~lid-~G~i~~~~~g~~~ 158 (172)
T 2k6v_A 86 PPEVADRYAK-AFHPSFLGL--SGSPEAV-REAAQTFGVFYQKSQYRGPGE--YLVDHTATTFVVK-EGRLVLLYSPDKA 158 (172)
T ss_dssp CHHHHHHHHH-HHCTTEEEE--CCCHHHH-HHHHHHHTCCEEEEEEEETTE--EEEEECCCEEEEE-TTEEEEEECHHHH
T ss_pred CHHHHHHHHH-HhCCCcEEE--eCCHHHH-HHHHHhcCeEEEeccCCCCCC--ceEecCCEEEEEE-CCEEEEEECCCCC
Confidence 7889999997 789999998 5533110 11111111000 000 1233444999999 999999998876
Q ss_pred -Ccchhhhc
Q 031257 155 -SLLSLEVI 162 (163)
Q Consensus 155 -~~~~~~~~ 162 (163)
+.+++.+.
T Consensus 159 ~~~~~l~~~ 167 (172)
T 2k6v_A 159 EATDRVVAD 167 (172)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 66666543
No 88
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.93 E-value=3.1e-26 Score=166.40 Aligned_cols=132 Identities=14% Similarity=0.241 Sum_probs=103.7
Q ss_pred ccCCCcccceEEecCCCCeeeccccCCc-EEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCC
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTYKGK-VLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~~gk-~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~ 83 (163)
+..|+.+|+|++.+.+| .+++++++|+ ++||+|| ++|||+|..+++.|++++++|+++|+.||+||+| +
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D--------~ 73 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD--------N 73 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC--------C
Confidence 67899999999999999 8999999997 9999998 8999999999999999999999999999999986 5
Q ss_pred HHHHHHHHHh-----hc--CCccceeeeeecCCCcchhHHHHhHhC---CCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 84 NDQIADFVCT-----RF--KSEFPIFEKIDVNGEHASPLYKLLKSG---KWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 84 ~~~~~~~~~~-----~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
.+..++|++. .+ +++||++ .|.++..+. .|+..... ..| +...+| ++||||++|+|++.+.+.
T Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~fpil--~D~~~~va~-~ygv~~~~~~~~~g-~~~~~p---~~fiID~~G~I~~~~~~~ 146 (233)
T 2v2g_A 74 VADHKEWSEDVKCLSGVKGDMPYPII--ADETRELAV-KLGMVDPDERTSTG-MPLTCR---AVFIIGPDKKLKLSILYP 146 (233)
T ss_dssp HHHHHHHHHHHHHHHTCCSSCSSCEE--ECTTCHHHH-HTTCEEEEEECTTC-CEEECE---EEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhCcccCCceEEE--ECChHHHHH-HhCCcCcccccCCC-cccccc---eEEEECCCCEEEEEEecC
Confidence 6677777752 45 7899999 776654432 22221100 000 002455 999999999999987543
No 89
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.5e-26 Score=162.40 Aligned_cols=127 Identities=19% Similarity=0.260 Sum_probs=105.5
Q ss_pred ccCCCcccceEEe---cCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCC
Q 031257 6 IQNPESIFDLSVK---DARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (163)
Q Consensus 6 ~~~~~~~p~f~l~---~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~ 81 (163)
+++|.+||+|+++ +.+|++++|++|+||++||+|| +.|||.|..+++.|++.+.+|+++|+.+++||+|
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~D------- 95 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTD------- 95 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecC-------
Confidence 5689999999976 5567899999999999999999 8999999999999999999999999999999985
Q ss_pred CCHHHHHHHHHhhc-------CCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeC
Q 031257 82 GSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (163)
Q Consensus 82 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~ 151 (163)
+....++|.. .. +++||++ .|.++.... .|..+....+ ...+ .+||||++|+|++...
T Consensus 96 -s~~sh~aw~~-~~~~~~~~~~l~fpll--sD~~~~vak-~YGv~~~~~g----~~~R---~tFiID~~G~Ir~~~v 160 (216)
T 3sbc_A 96 -SEYSLLAWTN-IPRKEGGLGPINIPLL--ADTNHSLSR-DYGVLIEEEG----VALR---GLFIIDPKGVIRHITI 160 (216)
T ss_dssp -CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTSHHHH-HHTCEETTTT----EECE---EEEEECTTSBEEEEEE
T ss_pred -chhhHHHHHH-HHHHhCCccCcccceE--eCCCCHHHH-HcCCeeccCC----ceee---EEEEECCCCeEEEEEE
Confidence 7888888875 33 5799999 888776654 4554433322 3456 8999999999998753
No 90
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.93 E-value=6.3e-26 Score=163.61 Aligned_cols=131 Identities=16% Similarity=0.276 Sum_probs=100.5
Q ss_pred ccCCCcccceEEecC--CCCeeeccccCCc-EE-EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCC
Q 031257 6 IQNPESIFDLSVKDA--RGHEVDLSTYKGK-VL-LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G~~~~l~~~~gk-~v-lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~ 81 (163)
+..|.++|+|++.+. +| .+++++++|| ++ |++||++|||+|..+++.|++++++|+++|+.+++||+|
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D------- 74 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN------- 74 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC-------
Confidence 678999999999999 99 8999999998 54 555689999999999999999999999999999999986
Q ss_pred CCHHHHHHHHH------hhcCCccceeeeeecCCCcchhHHHHhHhCC---CcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 82 GSNDQIADFVC------TRFKSEFPIFEKIDVNGEHASPLYKLLKSGK---WGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 82 ~~~~~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+.+..++|.. .+++++||++ .|.++..+. .|+...... .|. ...+| ++||||++|+|++.+.+
T Consensus 75 -~~~~~~~~~~~i~~~~~~~~~~fpil--~D~~~~va~-~ygv~~~~~~~~~g~-~~~~p---~~flID~~G~I~~~~~~ 146 (220)
T 1xcc_A 75 -SKESHDKWIEDIKYYGKLNKWEIPIV--CDESRELAN-KLKIMDEQEKDITGL-PLTCR---CLFFISPEKKIKATVLY 146 (220)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCCCCCEE--ECTTSHHHH-HHTCEEEEEECTTSC-EEECE---EEEEECTTSBEEEEEEE
T ss_pred -CHHHHHHHHHHHHHHhcCCCCcceeE--ECchhHHHH-HhCCCCcccccCCCC-Ccccc---eEEEECCCCEEEEEEec
Confidence 4556666664 1478899999 776654433 232211100 000 02345 99999999999999754
No 91
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.93 E-value=6.1e-25 Score=158.02 Aligned_cols=128 Identities=14% Similarity=0.156 Sum_probs=100.8
Q ss_pred ccccCCCcccceEEecCCCCeeeccccCCcEEEEEeccCC-CCCCh-----hhHHHHHHHHHHhcCCCeEEEEEecCCCC
Q 031257 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASK-CGMTN-----SNYIELSQLYDKYKDQGLEILAFPCNQFG 77 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~-C~~C~-----~~~~~l~~~~~~~~~~~~~ii~is~d~~~ 77 (163)
..+.+|.++|+|+|.+.+|+.++|++++||++||+||++| ||+|. .+++.|+++ | +|+.|++||.|
T Consensus 20 ~~l~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D--- 91 (224)
T 3keb_A 20 DFPRKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD--- 91 (224)
T ss_dssp CCCCTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS---
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC---
Confidence 4577899999999999999999999999999999999887 99999 888888887 4 67999999975
Q ss_pred CCCCCCHHHHHHHHHhhcCC-ccceeeeeec-CCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 78 EEEPGSNDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
+....++|+. ++++ +||++ +|. ++.... .|+...... ...+..+| ++||||++|+|++++..
T Consensus 92 -----s~~~~~~f~~-~~gl~~fplL--sD~~~~~vak-~yGv~~~~~-~~~G~~~p---~tfvID~dG~I~~~~~~ 155 (224)
T 3keb_A 92 -----SPSSLARARH-EHGLPNIALL--STLRGRDFHK-RYGVLITEY-PLSGYTSP---AIILADAANVVHYSERL 155 (224)
T ss_dssp -----CHHHHHHHHH-HHCCTTCEEE--ESTTCTTHHH-HTTCBCCST-TSTTCBCC---EEEEECTTCBEEEEEEC
T ss_pred -----CHHHHHHHHH-HcCCCCceEE--EcCCchHHHH-HhCCccccc-cccCCccC---EEEEEcCCCEEEEEEec
Confidence 7888999987 7898 79999 776 454443 233221110 00012355 99999999999998654
No 92
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.92 E-value=5.9e-26 Score=155.82 Aligned_cols=128 Identities=17% Similarity=0.161 Sum_probs=104.1
Q ss_pred EEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhc
Q 031257 16 SVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF 95 (163)
Q Consensus 16 ~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~ 95 (163)
++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++..++.+++|++|... ..++.+.+++|.. .+
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~--~~~~~~~~~~~~~-~~ 98 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFL--HEKKDGEFQKWYA-GL 98 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTST--TCCCTTHHHHHHT-TS
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCc--cccCHHHHHHHHH-hC
Confidence 78899999999999999999999999999999999999999999998889999999987432 2356778888876 66
Q ss_pred CCc-cceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 96 KSE-FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 96 ~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++. |++. .|.+..... .+ ++ .++| ++||||++|++++++.|..+.+++.+.
T Consensus 99 ~~~~~~~~--~d~~~~~~~----~~-----~v--~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~ 150 (164)
T 2h30_A 99 NYPKLPVV--TDNGGTIAQ----NL-----NI--SVYP---SWALIGKDGDVQRIVKGSINEAQALAL 150 (164)
T ss_dssp CCTTSCEE--ECTTCHHHH----HT-----TC--CSSS---EEEEECTTSCEEEEEESCCCHHHHHHH
T ss_pred CCCcceEE--EcCchHHHH----Hc-----CC--Cccc---eEEEECCCCcEEEEEcCCCCHHHHHHH
Confidence 776 7777 565443222 11 33 5566 999999999999999998887777654
No 93
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=1.6e-25 Score=163.29 Aligned_cols=134 Identities=19% Similarity=0.254 Sum_probs=105.7
Q ss_pred ccCCCcccceEEecC-CCC--eeeccc-cCCcEEEEEec-cCCCCCCh-hhHHHHHHHHHHhcCCCe-EEEEEecCCCCC
Q 031257 6 IQNPESIFDLSVKDA-RGH--EVDLST-YKGKVLLIVNV-ASKCGMTN-SNYIELSQLYDKYKDQGL-EILAFPCNQFGE 78 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~-~G~--~~~l~~-~~gk~vlv~f~-~s~C~~C~-~~~~~l~~~~~~~~~~~~-~ii~is~d~~~~ 78 (163)
+..|.++|+|++.+. +|+ .+++++ ++||++||+|| ++|||+|+ .+++.|++++++|+++|+ .|++||.|
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d---- 78 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN---- 78 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS----
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC----
Confidence 678999999999996 787 999999 89999999999 99999999 999999999999998899 99999985
Q ss_pred CCCCCHHHHHHHHHhhcCCc-cceeeeeecCCCcchhHHHHhHhCC-CcccCCccccCeeEEEECCCCcEEEEeCCCCC
Q 031257 79 EEPGSNDQIADFVCTRFKSE-FPIFEKIDVNGEHASPLYKLLKSGK-WGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTS 155 (163)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~ 155 (163)
+.+..++|++ +++.. ||++ .|.++.... .|+...... .|.-...+| ++||| ++|+|++++.+...
T Consensus 79 ----~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~-~~gv~~~~~~~g~~~~~~p---~t~li-~~G~i~~~~~~~~~ 145 (241)
T 1nm3_A 79 ----DTFVMNAWKE-DEKSENISFI--PDGNGEFTE-GMGMLVGKEDLGFGKRSWR---YSMLV-KNGVVEKMFIEPNE 145 (241)
T ss_dssp ----CHHHHHHHHH-HTTCTTSEEE--ECTTSHHHH-HTTCEEECTTTTCCEEECC---EEEEE-ETTEEEEEEECCSC
T ss_pred ----CHHHHHHHHH-hcCCCceEEE--ECCCcHHHH-HhCceeecccccCccccee---EEEEE-ECCEEEEEEEeccC
Confidence 6788899987 78886 9999 777654433 222111000 000001345 99999 99999999887643
No 94
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.92 E-value=1.7e-25 Score=152.19 Aligned_cols=132 Identities=20% Similarity=0.321 Sum_probs=104.8
Q ss_pred ccccCCCcccceEEecCCC--------CeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCC
Q 031257 4 QFIQNPESIFDLSVKDARG--------HEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQ 75 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G--------~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~ 75 (163)
..+..|..+|+|++.+.+| +.+++++++||++||.||++||++|+.+++.|++++++ .++.+++|+++
T Consensus 6 ~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~- 81 (156)
T 1kng_A 6 PSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYK- 81 (156)
T ss_dssp ------CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES-
T ss_pred hhHHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECC-
Confidence 3467899999999999999 99999999999999999999999999999999998876 34999999986
Q ss_pred CCCCCCCCHHHHHHHHHhhcCCccc-eeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCC
Q 031257 76 FGEEEPGSNDQIADFVCTRFKSEFP-IFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT 154 (163)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~ 154 (163)
++.+.+++|+. +++.+|+ +. .|.+.... .. .|+ .++| ++||||++|++++++.|..
T Consensus 82 ------~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~----~~-----~~v--~~~P---~~~~id~~G~i~~~~~g~~ 138 (156)
T 1kng_A 82 ------DAADNARRFLG-RYGNPFGRVG--VDANGRAS----IE-----WGV--YGVP---ETFVVGREGTIVYKLVGPI 138 (156)
T ss_dssp ------CCHHHHHHHHH-HHCCCCSEEE--EETTSHHH----HH-----TTC--CSSC---EEEEECTTSBEEEEEESCC
T ss_pred ------CCHHHHHHHHH-HcCCCCceee--eCchhHHH----Hh-----cCc--CccC---eEEEEcCCCCEEEEEeCCC
Confidence 57889999987 8899999 55 55443222 11 133 4555 9999999999999999988
Q ss_pred Ccchhhhc
Q 031257 155 SLLSLEVI 162 (163)
Q Consensus 155 ~~~~~~~~ 162 (163)
+.+++.+.
T Consensus 139 ~~~~l~~~ 146 (156)
T 1kng_A 139 TPDNLRSV 146 (156)
T ss_dssp CHHHHHHT
T ss_pred CHHHHHHH
Confidence 87776654
No 95
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.92 E-value=1.9e-25 Score=155.31 Aligned_cols=133 Identities=15% Similarity=0.173 Sum_probs=100.4
Q ss_pred cCCCcccceEEecC----CC-----Ceeecccc-CCc-EEEEEeccCCCCCChhh-HHHHHHHHHHhcCCCeE-EEEEec
Q 031257 7 QNPESIFDLSVKDA----RG-----HEVDLSTY-KGK-VLLIVNVASKCGMTNSN-YIELSQLYDKYKDQGLE-ILAFPC 73 (163)
Q Consensus 7 ~~~~~~p~f~l~~~----~G-----~~~~l~~~-~gk-~vlv~f~~s~C~~C~~~-~~~l~~~~~~~~~~~~~-ii~is~ 73 (163)
..|.++|+|++.+. +| +.++++++ +|| ++|++||++|||+|+.+ ++.|++++++|+++|+. |++||.
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred cccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 34669999999998 57 89999996 996 67889999999999999 99999999999988999 999998
Q ss_pred CCCCCCCCCCHHHHHHHHHhhcCC--ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeC
Q 031257 74 NQFGEEEPGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (163)
Q Consensus 74 d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~ 151 (163)
| +.+..++|++ ++++ +||++ .|.++.... .|+....... .+.++...+++|+|| +|+|++.+.
T Consensus 88 d--------~~~~~~~~~~-~~~~~~~fp~l--~D~~~~~~~-~ygv~~~~~~--~~~g~~~~~~t~~I~-~G~I~~~~~ 152 (171)
T 2pwj_A 88 N--------DPYTVNAWAE-KIQAKDAIEFY--GDFDGSFHK-SLELTTDLSA--GLLGIRSERWSAYVV-DGKVKALNV 152 (171)
T ss_dssp S--------CHHHHHHHHH-HTTCTTTSEEE--ECTTCHHHH-HHTCEEECTT--TTCCEEECCEEEEEE-TTEEEEEEE
T ss_pred C--------CHHHHHHHHH-HhCCCCceEEE--ECCccHHHH-HhCCcccccc--ccCCcccceeEEEEE-CCEEEEEEe
Confidence 5 5778889987 7885 79999 787665543 2322111000 001211223889999 999999987
Q ss_pred CCC
Q 031257 152 PTT 154 (163)
Q Consensus 152 g~~ 154 (163)
+..
T Consensus 153 ~~~ 155 (171)
T 2pwj_A 153 EES 155 (171)
T ss_dssp CSS
T ss_pred ecC
Confidence 753
No 96
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.92 E-value=4.3e-25 Score=161.63 Aligned_cols=132 Identities=19% Similarity=0.354 Sum_probs=102.6
Q ss_pred cccCCCcccceEEecCCCCeeec-ccc--CCcEE-EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARGHEVDL-STY--KGKVL-LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~~~l-~~~--~gk~v-lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~ 80 (163)
.+..|.++|+|++.+.+| .+++ +++ +||++ |++||++||++|..+++.|++++++|+++|+.|++||+|
T Consensus 4 ~~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D------ 76 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD------ 76 (249)
T ss_dssp ECCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred cCCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC------
Confidence 367899999999999999 7999 999 99975 567899999999999999999999999999999999986
Q ss_pred CCCHHHHHHHHHh-----hcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCC
Q 031257 81 PGSNDQIADFVCT-----RFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT 154 (163)
Q Consensus 81 ~~~~~~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~ 154 (163)
+.....+|... ..+++||++ .|.++..+. .|+...... |. ..+| ++||||++|+|+++..+..
T Consensus 77 --s~~~~~~w~~~~~~~~~~~i~fPil--~D~~~~ia~-~ygv~~~~~-g~--~~~p---~~fIID~dG~I~~~~~~~~ 144 (249)
T 3a2v_A 77 --SVFSHIKWKEWIERHIGVRIPFPII--ADPQGTVAR-RLGLLHAES-AT--HTVR---GVFIVDARGVIRTMLYYPM 144 (249)
T ss_dssp --CHHHHHHHHHHHHHHTCCCCCSCEE--ECTTSHHHH-HHTCCCTTC-SS--SCCE---EEEEECTTSBEEEEEEECT
T ss_pred --CHHHHHHHHHHHHHhcCCCCceeEE--ECCchHHHH-HhCCccccC-CC--cccc---eEEEECCCCeEEEEEecCC
Confidence 55555566542 147899999 776654433 232221111 11 2566 9999999999999976654
No 97
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.91 E-value=8.3e-25 Score=147.35 Aligned_cols=120 Identities=14% Similarity=0.204 Sum_probs=95.8
Q ss_pred CCCcccc-eEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC-CCeEEEEEecCCCCCCCCCCHH
Q 031257 8 NPESIFD-LSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 8 ~~~~~p~-f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~-~~~~ii~is~d~~~~~~~~~~~ 85 (163)
.+..+|+ |++.+.+|+.+++++++||++||+||++||++|+.+++.|+++++++++ .++.+++|++| ++.+
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d-------~~~~ 75 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWD-------ESAE 75 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCHH
Confidence 4678999 9999999999999999999999999999999999999999999999985 57999999987 4788
Q ss_pred HHHHHHHhhcCC-ccceeeee-ecCCCcchhHHHHhHhCCCcccCCccccCeeEEEEC-CCCcEEEEeC
Q 031257 86 QIADFVCTRFKS-EFPIFEKI-DVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVD-KNGQVVDRYY 151 (163)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid-~~G~i~~~~~ 151 (163)
.+++|+. +++. .+|+. . |.+. .+... .|+ .++| +++||| ++|+|++++.
T Consensus 76 ~~~~~~~-~~~~~~~~~~--~~d~~~----~~~~~-----~~v--~~~P---~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 76 DFKDYYA-KMPWLALPFE--DRKGME----FLTTG-----FDV--KSIP---TLVGVEADSGNIITTQA 127 (144)
T ss_dssp HHHHHHT-TCSSEECCTT--CHHHHH----HHHHH-----TTC--CSSS---EEEEEETTTCCEEESCH
T ss_pred HHHHHHH-hCCccccccC--chHHHH----HHHHH-----cCC--CCCC---EEEEEECCCCcEEeccc
Confidence 8999987 5543 45543 1 1111 11111 133 5566 999999 9999998754
No 98
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.90 E-value=5.6e-24 Score=161.24 Aligned_cols=128 Identities=12% Similarity=0.208 Sum_probs=103.0
Q ss_pred CcccceEEecCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHH
Q 031257 10 ESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIA 88 (163)
Q Consensus 10 ~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~ 88 (163)
..+|+|+|.+.+|++++|++++||++||+|| +.|||.|..+++.|++ ...+++.++|||.| +.+..+
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~ 69 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRD--------SVEALK 69 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESC--------CHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCC--------CHHHHH
Confidence 5789999999999999999999999999999 5799999999988864 23357999999974 788889
Q ss_pred HHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 89 DFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+|.. +++++||++ +|.++.... .|+.+. .+ ..+| ++||||++|+|++.+.+.....+++++
T Consensus 70 ~f~~-~~~l~fp~l--~D~~~~v~~-~ygv~~--~~----~~~r---~tfiId~~G~i~~~~~~v~~~~h~~~~ 130 (322)
T 4eo3_A 70 RFKE-KNDLKVTLL--SDPEGILHE-FFNVLE--NG----KTVR---STFLIDRWGFVRKEWRRVKVEGHVQEV 130 (322)
T ss_dssp HHHH-HHTCCSEEE--ECTTCHHHH-HTTCEE--TT----EECC---EEEEECTTSBEEEEEESCCSTTHHHHH
T ss_pred HHHH-hhCCceEEE--EcCchHHHH-hcCCCC--CC----cCcc---EEEEECCCCEEEEEEeCCCccccHHHH
Confidence 9987 899999999 887765544 232211 11 3466 999999999999998887666665554
No 99
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.90 E-value=6e-25 Score=151.81 Aligned_cols=122 Identities=16% Similarity=0.265 Sum_probs=95.3
Q ss_pred cCCCcccce-EEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC-CCeEEEEEecCCCCCCCCCCH
Q 031257 7 QNPESIFDL-SVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 7 ~~~~~~p~f-~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~-~~~~ii~is~d~~~~~~~~~~ 84 (163)
.+|.++|+| ++.+.+| .+++++++||++||+||++||++|+.++|.|+++++++++ .++.|++|++| ++.
T Consensus 23 ~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d-------~~~ 94 (165)
T 3s9f_A 23 GVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWD-------EEE 94 (165)
T ss_dssp HHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------CSH
T ss_pred hhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecC-------CCH
Confidence 468889999 9999999 9999999999999999999999999999999999999987 58999999997 567
Q ss_pred HHHHHHHHhhcC-CccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCC-CcEEEEeCC
Q 031257 85 DQIADFVCTRFK-SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKN-GQVVDRYYP 152 (163)
Q Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~-G~i~~~~~g 152 (163)
+.+++|+. +++ ..+++. .+.. ...+... .++ .++| ++||||++ |+|+++..+
T Consensus 95 ~~~~~~~~-~~~~~~~~~~--~~~~---~~~l~~~-----~~v--~~~P---t~~lid~~~G~iv~~~~~ 148 (165)
T 3s9f_A 95 DDFNAYYA-KMPWLSIPFA--NRNI---VEALTKK-----YSV--ESIP---TLIGLNADTGDTVTTRAR 148 (165)
T ss_dssp HHHHHHHT-TCSSEECCTT--CHHH---HHHHHHH-----TTC--CSSS---EEEEEETTTCCEEESCHH
T ss_pred HHHHHHHH-hCCCcccccC--chhH---HHHHHHH-----cCC--CCCC---EEEEEeCCCCEEEecccH
Confidence 88999987 443 234433 1100 0111111 133 5566 99999998 999997543
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.90 E-value=2.9e-24 Score=145.05 Aligned_cols=120 Identities=20% Similarity=0.338 Sum_probs=95.3
Q ss_pred CCCcccc-eEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC-CCeEEEEEecCCCCCCCCCCHH
Q 031257 8 NPESIFD-LSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 8 ~~~~~p~-f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~-~~~~ii~is~d~~~~~~~~~~~ 85 (163)
.+..+|+ |++.+.+| .+++++++||++||+||++||++|+.+++.|+++++++++ .++.+++|++| ++.+
T Consensus 4 ~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d-------~~~~ 75 (146)
T 1o8x_A 4 LDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWD-------EEED 75 (146)
T ss_dssp GGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------CSHH
T ss_pred hHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCC-------CCHH
Confidence 5778999 99999999 9999999999999999999999999999999999999984 57999999987 4678
Q ss_pred HHHHHHHhhcC-Cccceeeee-ecCCCcchhHHHHhHhCCCcccCCccccCeeEEEEC-CCCcEEEEeCC
Q 031257 86 QIADFVCTRFK-SEFPIFEKI-DVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVD-KNGQVVDRYYP 152 (163)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid-~~G~i~~~~~g 152 (163)
.+++|+. +++ ..+|+. . |.+. .+... .|+ .++| +++||| ++|+|+++..+
T Consensus 76 ~~~~~~~-~~~~~~~~~~--~~d~~~----~~~~~-----~~v--~~~P---t~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 76 GFAGYFA-KMPWLAVPFA--QSEAVQ----KLSKH-----FNV--ESIP---TLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp HHHHHHT-TCSSEECCGG--GHHHHH----HHHHH-----TTC--CSSS---EEEEEETTTCCEEESCHH
T ss_pred HHHHHHH-HCCceeeccc--hhhHHH----HHHHH-----hCC--CCCC---EEEEEECCCCeEEEecch
Confidence 8999987 444 355544 1 1111 11111 133 5566 999999 99999988544
No 101
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.89 E-value=6e-24 Score=142.94 Aligned_cols=121 Identities=17% Similarity=0.291 Sum_probs=94.3
Q ss_pred cCCCcccce-EEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhc-CCCeEEEEEecCCCCCCCCCCH
Q 031257 7 QNPESIFDL-SVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYK-DQGLEILAFPCNQFGEEEPGSN 84 (163)
Q Consensus 7 ~~~~~~p~f-~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~-~~~~~ii~is~d~~~~~~~~~~ 84 (163)
..|..+|+| ++.+.+| .+++++++||++||.||++||++|+.+++.|++++++++ +.++.+++|++| .+.
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d-------~~~ 74 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWD-------ENE 74 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSH
T ss_pred chhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCH
Confidence 457889997 9999999 999999999999999999999999999999999999998 357999999987 467
Q ss_pred HHHHHHHHhhcC-Cccceeeee-ecCCCcchhHHHHhHhCCCcccCCccccCeeEEEEC-CCCcEEEEeCC
Q 031257 85 DQIADFVCTRFK-SEFPIFEKI-DVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVD-KNGQVVDRYYP 152 (163)
Q Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid-~~G~i~~~~~g 152 (163)
+.+++++. +++ ..+|+. . |.+ ..+...+ ++ .++| +++|+| ++|+|+++..+
T Consensus 75 ~~~~~~~~-~~~~~~~~~~--~~~~~----~~~~~~~-----~v--~~~P---t~~lid~~~G~i~~~~~~ 128 (144)
T 1o73_A 75 SDFHDYYG-KMPWLALPFD--QRSTV----SELGKTF-----GV--ESIP---TLITINADTGAIIGTQAR 128 (144)
T ss_dssp HHHHHHHT-TCSSEECCTT--CHHHH----HHHHHHH-----TC--CSSS---EEEEEETTTCCEEESCHH
T ss_pred HHHHHHHH-hCCceEeecc--chhHH----HHHHHHc-----CC--CCCC---EEEEEECCCCeEEecchh
Confidence 78899887 443 234433 1 111 1111111 33 5666 999999 89999987543
No 102
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.82 E-value=4.6e-25 Score=148.04 Aligned_cols=121 Identities=19% Similarity=0.257 Sum_probs=95.6
Q ss_pred CcccceEEecCCCCeeeccc-cCCc-EEEEEeccCCCCCChhhHHHHHHHHHHhcC--CCeEEEEEecCCCCCCCCCCHH
Q 031257 10 ESIFDLSVKDARGHEVDLST-YKGK-VLLIVNVASKCGMTNSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSND 85 (163)
Q Consensus 10 ~~~p~f~l~~~~G~~~~l~~-~~gk-~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~--~~~~ii~is~d~~~~~~~~~~~ 85 (163)
+.+|+|++.+.+|+.+++++ ++|| ++||.||++||++|+.+++.|+++++++++ .++.+++|++| ++.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d-------~~~~ 74 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSD-------RSED 74 (143)
Confidence 46899999999999999999 9999 999999999999999999999999999953 47999999987 4567
Q ss_pred HHHHHHHhhcCCccceeeee-ecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC
Q 031257 86 QIADFVCTRFKSEFPIFEKI-DVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g 152 (163)
.+++|+. +++.+|+.+... |....... .| |+ .++| +++|||++|+|+++...
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~--------~v--~~~P---~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 75 DMFQYMM-ESHGDWLAIPYRSGPASNVTA-KY--------GI--TGIP---ALVIVKKDGTLISMNGR 127 (143)
Confidence 8888887 788888766212 11111111 11 22 4566 99999999999997543
No 103
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.87 E-value=1.7e-22 Score=140.35 Aligned_cols=134 Identities=11% Similarity=0.102 Sum_probs=103.4
Q ss_pred ccccCCCcccceEEecCCC----------Ceeecccc-CCcEE-EEEeccCCCCCChh-hHHHHHHHHHHhcCCCe-EEE
Q 031257 4 QFIQNPESIFDLSVKDARG----------HEVDLSTY-KGKVL-LIVNVASKCGMTNS-NYIELSQLYDKYKDQGL-EIL 69 (163)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G----------~~~~l~~~-~gk~v-lv~f~~s~C~~C~~-~~~~l~~~~~~~~~~~~-~ii 69 (163)
..+++|+++|++++...++ ++++|+++ +||++ |++||++|||.|.. +++.|++.+.+|+++|+ .|+
T Consensus 8 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vi 87 (176)
T 4f82_A 8 HMIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIW 87 (176)
T ss_dssp CCCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEE
Confidence 3478999999988777643 68899997 99855 66777999999999 99999999999999999 999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHhhcCCc--cceeeeeecCCCcchhHHHHhHhCC-CcccCCccccCeeEEEECCCCcE
Q 031257 70 AFPCNQFGEEEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGK-WGIFGDDIQWNFAKFLVDKNGQV 146 (163)
Q Consensus 70 ~is~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~ip~~~~~~lid~~G~i 146 (163)
+||+| +....++|.. +.++. ||++ +|.++..+. .|+...... .| .++...+.+||| ++|+|
T Consensus 88 gIS~D--------~~~~~~~f~~-~~~l~~~f~lL--sD~~~~va~-ayGv~~~~~~~G---~g~~s~R~tfII-~dG~I 151 (176)
T 4f82_A 88 CVSVN--------DAFVMGAWGR-DLHTAGKVRMM--ADGSAAFTH-ALGLTQDLSARG---MGIRSLRYAMVI-DGGVV 151 (176)
T ss_dssp EEESS--------CHHHHHHHHH-HTTCTTTSEEE--ECTTCHHHH-HHTCEEECGGGT---CCEEECCEEEEE-ETTEE
T ss_pred EEeCC--------CHHHHHHHHH-HhCCCCCceEE--EcCchHHHH-HhCCCccccccC---CCcccccEEEEE-cCCEE
Confidence 99985 7888999987 78888 9999 887765544 333322110 11 122122389999 99999
Q ss_pred EEEeCCC
Q 031257 147 VDRYYPT 153 (163)
Q Consensus 147 ~~~~~g~ 153 (163)
++.+...
T Consensus 152 ~~~~~~~ 158 (176)
T 4f82_A 152 KTLAVEA 158 (176)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9997754
No 104
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.85 E-value=2.1e-21 Score=134.47 Aligned_cols=133 Identities=17% Similarity=0.195 Sum_probs=103.5
Q ss_pred cccCCCcccceEEecCCC-Ceeecccc-CCcEEEEEec-cCCCCCChhhHHHHHHHHHHhcCCCeE-EEEEecCCCCCCC
Q 031257 5 FIQNPESIFDLSVKDARG-HEVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLE-ILAFPCNQFGEEE 80 (163)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G-~~~~l~~~-~gk~vlv~f~-~s~C~~C~~~~~~l~~~~~~~~~~~~~-ii~is~d~~~~~~ 80 (163)
.++.|+++|+|++.+.++ +.++|+++ +||++||+|+ +.|||.|..+++.+++.+.+|+++|+. |++||+|
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D------ 86 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN------ 86 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 378999999999994432 89999994 9999888888 689999999999999999999999996 9999985
Q ss_pred CCCHHHHHHHHHhhcCC--ccceeeeeecCCCcchhHHHHhHhCC-CcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 81 PGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSGK-WGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
+....++|.. +.+. +||++ +|.+++.+. .|+...... .|......+ .+|||| +|+|++.+...
T Consensus 87 --~~~~~~~w~~-~~~~~~~f~lL--SD~~~~~a~-ayGv~~~~~~~g~g~~~~R---~tfvId-dG~V~~~~v~~ 152 (171)
T 2xhf_A 87 --DPFVMAAWGK-TVDPEHKIRML--ADMHGEFTR-ALGTELDSSKMLGNNRSRR---YAMLID-DNKIRSVSTEP 152 (171)
T ss_dssp --CHHHHHHHHH-HHCTTCCSEEE--ECTTSHHHH-HHTCBCCCHHHHSSCCBCC---EEEEEE-TTEEEEEEETT
T ss_pred --CHHHHHHHHH-hcCCCCCeEEE--EeCCchHHH-HhCCceeccccCCCcceEE---EEEEEe-CCEEEEEEEeC
Confidence 7889999987 6788 89999 887765544 344332110 010002344 789999 99999987654
No 105
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.84 E-value=2.3e-21 Score=135.70 Aligned_cols=131 Identities=12% Similarity=0.177 Sum_probs=100.0
Q ss_pred ccCCCcccceEEec--C---------CC----Ceeeccc-cCCcEEEEEec-cCCCCCCh-hhHHHHHHHHHHh-cCCCe
Q 031257 6 IQNPESIFDLSVKD--A---------RG----HEVDLST-YKGKVLLIVNV-ASKCGMTN-SNYIELSQLYDKY-KDQGL 66 (163)
Q Consensus 6 ~~~~~~~p~f~l~~--~---------~G----~~~~l~~-~~gk~vlv~f~-~s~C~~C~-~~~~~l~~~~~~~-~~~~~ 66 (163)
+++|+.+|+|++.+ . +| +.+++++ ++||++||+|+ +.|||.|. .+++.+++.+.+| +++|+
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~ 80 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNF 80 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCC
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999998 4 67 7999999 69998888777 78999999 9999999999999 99999
Q ss_pred E-EEEEecCCCCCCCCCCHHHHHHHHHhhcCC-ccceeeeeecCCCcchhHHHHhHhCC-CcccCCccccCeeEEEECCC
Q 031257 67 E-ILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGK-WGIFGDDIQWNFAKFLVDKN 143 (163)
Q Consensus 67 ~-ii~is~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~ip~~~~~~lid~~ 143 (163)
. |++||.| +....++|.. +++. +||++ +|.++..+. .|+...... .|.-....+ .+|||| +
T Consensus 81 ~~V~gvS~D--------~~~~~~~~~~-~~~~~~f~lL--sD~~~~~a~-~yGv~~~~~~~G~g~~~~R---~tfvId-d 144 (182)
T 1xiy_A 81 DDIYCITNN--------DIYVLKSWFK-SMDIKKIKYI--SDGNSSFTD-SMNMLVDKSNFFMGMRPWR---FVAIVE-N 144 (182)
T ss_dssp SEEEEEESS--------CHHHHHHHHH-HTTCCSSEEE--ECTTSHHHH-HTTCEEECGGGTCCEEECC---EEEEEE-T
T ss_pred cEEEEEeCC--------CHHHHHHHHH-HcCCCCceEE--EeCchHHHH-HhCCceeccccCCCCceEE---EEEEEc-C
Confidence 5 9999985 7888899987 7788 69999 787765543 333322110 111001244 789999 9
Q ss_pred CcEEEEeCC
Q 031257 144 GQVVDRYYP 152 (163)
Q Consensus 144 G~i~~~~~g 152 (163)
|+|++.+..
T Consensus 145 G~V~~~~v~ 153 (182)
T 1xiy_A 145 NILVKMFQE 153 (182)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEEe
Confidence 999998754
No 106
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.74 E-value=3.7e-19 Score=118.57 Aligned_cols=113 Identities=13% Similarity=0.125 Sum_probs=83.2
Q ss_pred ccCCCcccceE-EecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHH---HHHHHHhcCCCeEEEEEecCCCCCCCC
Q 031257 6 IQNPESIFDLS-VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEP 81 (163)
Q Consensus 6 ~~~~~~~p~f~-l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l---~~~~~~~~~~~~~ii~is~d~~~~~~~ 81 (163)
+..+.++|+|. +.+.++....+++.+||++||.||++||++|+...+.+ .++.+++++ +.++.|+++.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~------ 75 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTA------ 75 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTT------
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCC------
Confidence 56778899998 66667777778888899999999999999999999998 889888863 9999999852
Q ss_pred CCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEE--EEeCCCCCcchh
Q 031257 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV--DRYYPTTSLLSL 159 (163)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~--~~~~g~~~~~~~ 159 (163)
..+...+.+. ++ |+ .++| +++++|++|+++ .++.|..+.+++
T Consensus 76 -~~~~~~~l~~-~~-----------------------------~v--~~~P---t~~~~d~~G~~v~~~~~~G~~~~~~l 119 (134)
T 2fwh_A 76 -NDAQDVALLK-HL-----------------------------NV--LGLP---TILFFDGQGQEHPQARVTGFMDAETF 119 (134)
T ss_dssp -CCHHHHHHHH-HT-----------------------------TC--CSSS---EEEEECTTSCBCGGGCBCSCCCHHHH
T ss_pred -CcchHHHHHH-Hc-----------------------------CC--CCCC---EEEEECCCCCEeeeeeeeeccCHHHH
Confidence 2122222222 21 22 5566 999999999998 788998888887
Q ss_pred hhc
Q 031257 160 EVI 162 (163)
Q Consensus 160 ~~~ 162 (163)
.+.
T Consensus 120 ~~~ 122 (134)
T 2fwh_A 120 SAH 122 (134)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.71 E-value=2.2e-17 Score=108.51 Aligned_cols=106 Identities=16% Similarity=0.133 Sum_probs=81.0
Q ss_pred CcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEe--cCCCCCCCCCCHHHH
Q 031257 10 ESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP--CNQFGEEEPGSNDQI 87 (163)
Q Consensus 10 ~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is--~d~~~~~~~~~~~~~ 87 (163)
..+++++..+.+|........+|+++||.||++||++|+...+.+.++.++++ .++.++.|+ ++ ...
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d--------~~~-- 72 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEE--------KNI-- 72 (126)
T ss_dssp CCSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSS--------HHH--
T ss_pred cccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCC--------chH--
Confidence 34566666677776665666788999999999999999999999999999987 459999999 43 111
Q ss_pred HHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 88 ADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+.+. ++ ++ .++| +++++|++|+++.++.|..+.+++.+.
T Consensus 73 -~~~~-~~-----------------------------~v--~~~P---t~~~~~~~G~~~~~~~G~~~~~~l~~~ 111 (126)
T 2l57_A 73 -DLAY-KY-----------------------------DA--NIVP---TTVFLDKEGNKFYVHQGLMRKNNIETI 111 (126)
T ss_dssp -HHHH-HT-----------------------------TC--CSSS---EEEEECTTCCEEEEEESCCCHHHHHHH
T ss_pred -HHHH-Hc-----------------------------CC--ccee---EEEEECCCCCEEEEecCCCCHHHHHHH
Confidence 1111 11 22 4566 999999999999999998888777654
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.66 E-value=1.9e-16 Score=105.86 Aligned_cols=98 Identities=18% Similarity=0.216 Sum_probs=77.6
Q ss_pred EecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 031257 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (163)
Q Consensus 17 l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (163)
+.+.+|....++.++|+++||.||++||++|+...|.+.++.++++++ +.++.|+++ ... + .+. ++
T Consensus 36 l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~-------~~~-~---~~~-~~- 101 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVD-------KEP-E---LAR-DF- 101 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCH-H---HHH-HT-
T ss_pred hhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECC-------CCH-H---HHH-Hc-
Confidence 456678888888889999999999999999999999999999999865 999999875 121 1 111 21
Q ss_pred CccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 97 SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 97 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++|++|+++ ++.|..+.+++.+.
T Consensus 102 ----------------------------~v--~~~P---t~~~~~~~g~~~-~~~G~~~~~~l~~~ 133 (141)
T 3hxs_A 102 ----------------------------GI--QSIP---TIWFVPMKGEPQ-VNMGALSKEQLKGY 133 (141)
T ss_dssp ----------------------------TC--CSSS---EEEEECSSSCCE-EEESCCCHHHHHHH
T ss_pred ----------------------------CC--CCcC---EEEEEeCCCCEE-EEeCCCCHHHHHHH
Confidence 22 5666 999999999998 67888887777654
No 109
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.66 E-value=1.6e-16 Score=104.75 Aligned_cols=104 Identities=15% Similarity=0.232 Sum_probs=77.9
Q ss_pred CCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHH
Q 031257 9 PESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIA 88 (163)
Q Consensus 9 ~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~ 88 (163)
..++|++. ..+++.++....+||++||.||++||++|+.+.|.+.++.+++++ ++.++.|+++. . .+
T Consensus 21 ~~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~-------~-~~-- 87 (128)
T 3ul3_B 21 FKKVPRLQ--QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK-------N-ES-- 87 (128)
T ss_dssp -----CCC--CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG-------C-HH--
T ss_pred hccCCccc--cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------C-HH--
Confidence 34555555 567777778888999999999999999999999999999999985 49999998751 1 11
Q ss_pred HHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 89 DFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+. ++ ++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 88 -l~~-~~-----------------------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 124 (128)
T 3ul3_B 88 -LAR-KF-----------------------------SV--KSLP---TIILL-KNKTMLARKDHFVSSNDLIAL 124 (128)
T ss_dssp -HHH-HT-----------------------------TC--CSSS---EEEEE-ETTEEEEEESSCCCHHHHHHH
T ss_pred -HHH-Hc-----------------------------CC--CCcC---EEEEE-ECCEEEEEecCCCCHHHHHHH
Confidence 111 11 22 5566 98888 789999999998888887764
No 110
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.65 E-value=6.1e-17 Score=110.31 Aligned_cols=106 Identities=12% Similarity=0.075 Sum_probs=72.3
Q ss_pred cCCCCeeeccccCCcEEEEEec-cCCCCCChhhHHHH---HHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhh
Q 031257 19 DARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR 94 (163)
Q Consensus 19 ~~~G~~~~l~~~~gk~vlv~f~-~s~C~~C~~~~~~l---~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~ 94 (163)
...|+.+.+++.+||++||.|| ++||++|+.+.|.+ .++.+.+.. ++.++.|+.+. ..
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~-------~~---------- 95 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQ-------KN---------- 95 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCS-------SC----------
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCcc-------cc----------
Confidence 4457778888889999999999 99999999999999 777665533 48899998752 11
Q ss_pred cCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCC--Ccchhhh
Q 031257 95 FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLEV 161 (163)
Q Consensus 95 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~--~~~~~~~ 161 (163)
++.++.. |.+.. +... .++ .++| +++|+|++|+++.+. |.. +.+++.+
T Consensus 96 -~~~~~~~---~~~~~----l~~~-----~~v--~~~P---t~~~~d~~G~~~~~~-G~~~~~~~~l~~ 145 (154)
T 2ju5_A 96 -HQPEEQR---QKNQE----LKAQ-----YKV--TGFP---ELVFIDAEGKQLARM-GFEPGGGAAYVS 145 (154)
T ss_dssp -CCCHHHH---HHHHH----HHHH-----TTC--CSSS---EEEEECTTCCEEEEE-CCCTTCHHHHHH
T ss_pred -CCChhhH---hhHHH----HHHH-----cCC--CCCC---EEEEEcCCCCEEEEe-cCCCCCHHHHHH
Confidence 1112111 11100 0111 133 5566 999999999999998 877 6666554
No 111
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.56 E-value=5.1e-15 Score=99.79 Aligned_cols=106 Identities=18% Similarity=0.216 Sum_probs=80.6
Q ss_pred CCcccceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHH
Q 031257 9 PESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIA 88 (163)
Q Consensus 9 ~~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~ 88 (163)
+.++++..+...+++.+.....+++++||.||++||++|+...+.+.++.+++.++ +.++.|+++ ...++
T Consensus 32 ~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~--------~~~~l- 101 (148)
T 3p2a_A 32 GHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTE--------AEPAL- 101 (148)
T ss_dssp CCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT--------TCHHH-
T ss_pred CCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECc--------CCHHH-
Confidence 55667777777777766654457899999999999999999999999999999765 999999875 12221
Q ss_pred HHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 89 DFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.. ++ ++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 102 --~~-~~-----------------------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 137 (148)
T 3p2a_A 102 --ST-RF-----------------------------RI--RSIP---TIMLY-RNGKMIDMLNGAVPKAPFDNW 137 (148)
T ss_dssp --HH-HT-----------------------------TC--CSSS---EEEEE-ETTEEEEEESSCCCHHHHHHH
T ss_pred --HH-HC-----------------------------CC--CccC---EEEEE-ECCeEEEEEeCCCCHHHHHHH
Confidence 11 21 22 5566 87777 699999999998888777654
No 112
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.54 E-value=1.7e-16 Score=109.66 Aligned_cols=115 Identities=9% Similarity=0.136 Sum_probs=63.7
Q ss_pred ccccCCcEEEEEeccCCCCCChhhHHHH---HHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceee
Q 031257 27 LSTYKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFE 103 (163)
Q Consensus 27 l~~~~gk~vlv~f~~s~C~~C~~~~~~l---~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (163)
++..+||++||+||++||++|+.+.+.+ .++.+.+++ ++.++.|++|. .. ++..............+
T Consensus 42 ~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~-------~~-~~~~~~~~~~~~~~~~~- 111 (172)
T 3f9u_A 42 YARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN-------KT-PLTEPVKIMENGTERTL- 111 (172)
T ss_dssp HHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC-------CC-EEEEEEEEEETTEEEEE-
T ss_pred HHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc-------cc-ccchhhhhhhcchhhhh-
Confidence 3345699999999999999999863333 444444443 49999999862 11 00000000000000000
Q ss_pred eeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCC-cchhhhc
Q 031257 104 KIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTS-LLSLEVI 162 (163)
Q Consensus 104 ~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~-~~~~~~~ 162 (163)
.. ....+..+.....++ .++| +++|+|++|+++.++.|..+ .+++.+.
T Consensus 112 -~~-----~~~~~~~~~~~~~~v--~~~P---t~~lid~~G~~~~~~~G~~~~~~~l~~~ 160 (172)
T 3f9u_A 112 -RT-----VGDKWSYLQRVKFGA--NAQP---FYVLIDNEGNPLNKSYAYDEDISKYINF 160 (172)
T ss_dssp -EE-----HHHHHHHHHHHHHSC--CCSS---EEEEECTTSCBSSCCBCSCCCHHHHHHH
T ss_pred -hh-----hhhhhhHHHHHHcCC--CCcc---eEEEECCCCCEEeeccCCCCCHHHHHHH
Confidence 00 000000110111133 5666 99999999999999889887 6666543
No 113
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.54 E-value=2.7e-15 Score=103.56 Aligned_cols=46 Identities=15% Similarity=0.102 Sum_probs=40.5
Q ss_pred ccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 27 LSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 27 l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+++++|+++||+|||+|||+|+.+.|.|.+++++++ ++.++.|+.|
T Consensus 49 l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d 94 (167)
T 1z6n_A 49 LQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKG 94 (167)
T ss_dssp HHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHH
T ss_pred HHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECC
Confidence 556789999999999999999999999999998875 4889998754
No 114
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.53 E-value=5.6e-15 Score=97.76 Aligned_cols=91 Identities=16% Similarity=0.086 Sum_probs=65.3
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHHH--HHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeec
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIELS--QLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l~--~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 107 (163)
.+||++||.||++||++|+...|.|. ++.+++++ ++.++.|+++. .+...+ .+. ++++.+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~-----~~~~~~---l~~-~~~v~~~------- 89 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN-----FDRNLE---LSQ-AYGDPIQ------- 89 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT-----TTSSHH---HHH-HTTCGGG-------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc-----ccchHH---HHH-HhCCccC-------
Confidence 46899999999999999999999999 99998865 49999998741 011111 222 3332210
Q ss_pred CCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCC-------CCCcchhhh
Q 031257 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP-------TTSLLSLEV 161 (163)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g-------~~~~~~~~~ 161 (163)
.++| +++++|++|+++.+..| ..+.+++.+
T Consensus 90 ---------------------~~~P---t~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~ 126 (133)
T 3fk8_A 90 ---------------------DGIP---AVVVVNSDGKVRYTTKGGELANARKMSDQGIYD 126 (133)
T ss_dssp ---------------------GCSS---EEEEECTTSCEEEECCSCTTTTGGGSCHHHHHH
T ss_pred ---------------------Cccc---eEEEECCCCCEEEEecCCcccccccCCHHHHHH
Confidence 3456 99999999999999888 445555544
No 115
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.53 E-value=9.9e-15 Score=93.87 Aligned_cols=84 Identities=20% Similarity=0.289 Sum_probs=66.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...+.+.++.+++++ ++.++.|+++. .. + .+. ++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~-------~~-~---l~~-~~--------------- 67 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE-------NQ-E---TAG-KY--------------- 67 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT-------CC-S---HHH-HT---------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------CH-H---HHH-Hc---------------
Confidence 789999999999999999999999999999986 49999999862 11 0 111 10
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 68 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 99 (112)
T 2voc_A 68 --------------GV--MSIP---TLLVL-KDGEVVETSVGFKPKEALQEL 99 (112)
T ss_dssp --------------TC--CSBS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred --------------CC--Cccc---EEEEE-eCCEEEEEEeCCCCHHHHHHH
Confidence 22 5566 99999 899999999998888877654
No 116
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.53 E-value=1.2e-14 Score=92.81 Aligned_cols=85 Identities=21% Similarity=0.222 Sum_probs=63.2
Q ss_pred cccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeec
Q 031257 28 STYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (163)
Q Consensus 28 ~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 107 (163)
++.+++++||.|||+||++|+...|.+.++.+++++ +.++.|++| ...++. . ++
T Consensus 16 ~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d--------~~~~l~---~-~~------------ 69 (105)
T 3zzx_A 16 NEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVD--------ECEDIA---Q-DN------------ 69 (105)
T ss_dssp HHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETT--------TCHHHH---H-HT------------
T ss_pred HhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecc--------cCHHHH---H-Hc------------
Confidence 344578999999999999999999999999998864 888899875 122221 1 21
Q ss_pred CCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| |++++ ++|+++.++.|. +++++.+.
T Consensus 70 -----------------~V--~~~P---T~~~~-~~G~~v~~~~G~-~~~~l~~~ 100 (105)
T 3zzx_A 70 -----------------QI--ACMP---TFLFM-KNGQKLDSLSGA-NYDKLLEL 100 (105)
T ss_dssp -----------------TC--CBSS---EEEEE-ETTEEEEEEESC-CHHHHHHH
T ss_pred -----------------CC--Ceec---EEEEE-ECCEEEEEEeCc-CHHHHHHH
Confidence 22 5667 76665 799999999994 66666654
No 117
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.51 E-value=1.2e-14 Score=94.18 Aligned_cols=84 Identities=17% Similarity=0.229 Sum_probs=64.6
Q ss_pred ccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 29 TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 29 ~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
+.+++++||.||++||++|+...|.+.++.+++++ +.++.|+++ ...+ .+. ++
T Consensus 28 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d--------~~~~---l~~-~~------------- 80 (116)
T 3qfa_C 28 AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVD--------DCQD---VAS-EC------------- 80 (116)
T ss_dssp HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETT--------TTHH---HHH-HT-------------
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC--------CCHH---HHH-Hc-------------
Confidence 34789999999999999999999999999999876 999999875 1111 111 21
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|. +.+++.+.
T Consensus 81 ----------------~v--~~~P---t~~~~-~~G~~~~~~~G~-~~~~l~~~ 111 (116)
T 3qfa_C 81 ----------------EV--KSMP---TFQFF-KKGQKVGEFSGA-NKEKLEAT 111 (116)
T ss_dssp ----------------TC--CSSS---EEEEE-SSSSEEEEEESC-CHHHHHHH
T ss_pred ----------------CC--cccc---EEEEE-eCCeEEEEEcCC-CHHHHHHH
Confidence 22 5666 87777 799999999998 77777654
No 118
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=7.1e-14 Score=93.01 Aligned_cols=93 Identities=14% Similarity=-0.003 Sum_probs=69.2
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
.+++++||.||++||++|+...|.+.++.+++++.++.++.|+++ .. .+ .+. ++++..+
T Consensus 24 ~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~-------~~-~~---~~~-~~~v~~~--------- 82 (137)
T 2dj0_A 24 DKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG-------RY-TD---VST-RYKVSTS--------- 82 (137)
T ss_dssp STTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT-------TC-HH---HHH-HTTCCCC---------
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc-------cC-HH---HHH-HccCccc---------
Confidence 355699999999999999999999999999998756999999875 12 22 222 3333210
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhcC
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (163)
+++ .++| +++++ ++|+++.++.|..+.+++.+.|
T Consensus 83 --------------~~~--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~l 116 (137)
T 2dj0_A 83 --------------PLT--KQLP---TLILF-QGGKEAMRRPQIDKKGRAVSWT 116 (137)
T ss_dssp --------------SSS--SCSS---EEEEE-SSSSEEEEESCBCSSSCBCCCC
T ss_pred --------------CCc--CCCC---EEEEE-ECCEEEEEecCcCchHHHHHHH
Confidence 011 4677 88888 7899999999988887776643
No 119
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.51 E-value=1.1e-14 Score=95.91 Aligned_cols=94 Identities=15% Similarity=0.241 Sum_probs=67.1
Q ss_pred eeeccccCCcEEEEEeccCCCCCChhhHHHH---HHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccc
Q 031257 24 EVDLSTYKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFP 100 (163)
Q Consensus 24 ~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l---~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (163)
.+.+++.+|+++||.||++||++|+...+.+ .++.+.++. ++.++.|+++. +... ..+. ++
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~------~~~~---~~~~-~~----- 82 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEK------GEGV---ELRK-KY----- 82 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSS------TTHH---HHHH-HT-----
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCC------cchH---HHHH-Hc-----
Confidence 4455556789999999999999999999998 666665543 37788887641 1111 1111 11
Q ss_pred eeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 101 IFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 101 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++|++|+++.++.|..+.+++.+.
T Consensus 83 ------------------------~v--~~~P---t~~~~d~~G~~~~~~~G~~~~~~l~~~ 115 (130)
T 2kuc_A 83 ------------------------GV--HAYP---TLLFINSSGEVVYRLVGAEDAPELLKK 115 (130)
T ss_dssp ------------------------TC--CSSC---EEEEECTTSCEEEEEESCCCHHHHHHH
T ss_pred ------------------------CC--CCCC---EEEEECCCCcEEEEecCCCCHHHHHHH
Confidence 22 4566 999999999999999998887777654
No 120
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.50 E-value=2.3e-14 Score=90.76 Aligned_cols=85 Identities=20% Similarity=0.243 Sum_probs=66.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
.+++++|.||++||++|+...+.+.++.++++++ +.++.|+++. .. + .+. ++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~-~---~~~-~~--------------- 67 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDE-------NP-E---TTS-QF--------------- 67 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTT-------CH-H---HHH-HT---------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcC-------CH-H---HHH-Hc---------------
Confidence 5789999999999999999999999999998765 9999998751 11 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhcC
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (163)
|+ .++| +++++ ++|+++.++.|..+.+++.+.|
T Consensus 68 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~l 100 (105)
T 1nsw_A 68 --------------GI--MSIP---TLILF-KGGRPVKQLIGYQPKEQLEAQL 100 (105)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHHT
T ss_pred --------------CC--cccc---EEEEE-eCCeEEEEEecCCCHHHHHHHH
Confidence 22 4566 88888 8999999999988877776543
No 121
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.49 E-value=3.5e-14 Score=94.43 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=65.2
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
.++++||.||++||++|+...+.|.++.+++++. +.++.|+++. . .+ .+. ++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~-~~---l~~-~~--------------- 88 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEK-------E-QE---LAG-AF--------------- 88 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------C-HH---HHH-HT---------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCC-------C-HH---HHH-Hc---------------
Confidence 4689999999999999999999999999999764 9999998751 1 11 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++|++|+++ ++.|..+.+++.+.
T Consensus 89 --------------~v--~~~P---t~~~~~~~G~~~-~~~G~~~~~~l~~~ 120 (136)
T 2l5l_A 89 --------------GI--RSIP---SILFIPMEGKPE-MAQGAMPKASFKKA 120 (136)
T ss_dssp --------------TC--CSSC---EEEEECSSSCCE-EEESCCCHHHHHHH
T ss_pred --------------CC--CCCC---EEEEECCCCcEE-EEeCCCCHHHHHHH
Confidence 22 4566 999999999998 67787887777654
No 122
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=1.5e-13 Score=90.32 Aligned_cols=85 Identities=13% Similarity=0.146 Sum_probs=65.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
.++++||.||++||++|+...|.+.++.+++++. +.++.|+++ ...++ +. ++
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~--------~~~~l---~~-~~--------------- 85 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNAD--------KHQSL---GG-QY--------------- 85 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETT--------TCHHH---HH-HH---------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCC--------CCHHH---HH-Hc---------------
Confidence 4689999999999999999999999999998875 899999875 11111 11 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| ++++++++|+++.++.|..+.+++.+.
T Consensus 86 --------------~v--~~~P---t~~~~~~~~~~~~~~~G~~~~~~l~~~ 118 (130)
T 2dml_A 86 --------------GV--QGFP---TIKIFGANKNKPEDYQGGRTGEAIVDA 118 (130)
T ss_dssp --------------TC--CSSS---EEEEESSCTTSCEECCSCCSHHHHHHH
T ss_pred --------------CC--CccC---EEEEEeCCCCeEEEeecCCCHHHHHHH
Confidence 12 5566 999999989867778888777766543
No 123
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.49 E-value=5.7e-14 Score=91.18 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=72.0
Q ss_pred EEecCCCCeeecc-ccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC----CCeEEEEEecCCCCCCCCCCHHHHHHH
Q 031257 16 SVKDARGHEVDLS-TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSNDQIADF 90 (163)
Q Consensus 16 ~l~~~~G~~~~l~-~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~----~~~~ii~is~d~~~~~~~~~~~~~~~~ 90 (163)
.+..++++.+... ..+++++||.||++||++|+...|.+.++.+++++ .++.++.|+++. .
T Consensus 8 ~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~------- 73 (121)
T 2djj_A 8 PVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA-------N------- 73 (121)
T ss_dssp SSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT-------S-------
T ss_pred CeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc-------c-------
Confidence 3445566666544 23679999999999999999999999999999986 258999998741 0
Q ss_pred HHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcE-EEEeCCCCCcchhhhc
Q 031257 91 VCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQV-VDRYYPTTSLLSLEVI 162 (163)
Q Consensus 91 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i-~~~~~g~~~~~~~~~~ 162 (163)
+ + .. ++ .++| ++++++++|++ +.++.|..+.+++.+.
T Consensus 74 ---------~-~--~~------------------~v--~~~P---t~~~~~~~~~~~~~~~~G~~~~~~l~~~ 111 (121)
T 2djj_A 74 ---------D-V--PD------------------EI--QGFP---TIKLYPAGAKGQPVTYSGSRTVEDLIKF 111 (121)
T ss_dssp ---------C-C--SS------------------CC--SSSS---EEEEECSSCTTSCCCCCCCSCHHHHHHH
T ss_pred ---------c-c--cc------------------cc--CcCC---eEEEEeCcCCCCceEecCCCCHHHHHHH
Confidence 0 1 00 11 5677 99999988885 5677887777777654
No 124
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.48 E-value=1.9e-14 Score=97.42 Aligned_cols=43 Identities=14% Similarity=-0.027 Sum_probs=39.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+++++||+||++||++|+.+.|.|.++.++++++ +.++.|++|
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d 64 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVD 64 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECC
Confidence 4799999999999999999999999999998765 999999875
No 125
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.48 E-value=6e-14 Score=88.80 Aligned_cols=84 Identities=19% Similarity=0.277 Sum_probs=66.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...+.+.++.++++++ +.++.|+++ ... ++ +. ++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~-------~~~-~~---~~-~~--------------- 69 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVD-------ENP-ST---AA-KY--------------- 69 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCH-HH---HH-HT---------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECC-------cCH-HH---HH-hC---------------
Confidence 7899999999999999999999999999999876 999999975 122 11 11 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| ++++++ +|+++.++.|..+.+++.+.
T Consensus 70 --------------~v--~~~P---t~~~~~-~G~~~~~~~g~~~~~~l~~~ 101 (106)
T 3die_A 70 --------------EV--MSIP---TLIVFK-DGQPVDKVVGFQPKENLAEV 101 (106)
T ss_dssp --------------TC--CSBS---EEEEEE-TTEEEEEEESCCCHHHHHHH
T ss_pred --------------CC--cccC---EEEEEe-CCeEEEEEeCCCCHHHHHHH
Confidence 12 5566 888885 99999999998887777654
No 126
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.48 E-value=3.5e-14 Score=90.26 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=69.7
Q ss_pred CCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccc
Q 031257 21 RGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFP 100 (163)
Q Consensus 21 ~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (163)
+++.+...-.++++++|.||++||++|+...+.+.++.+++++. +.++.++++ ...++ +. ++
T Consensus 10 ~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~--------~~~~~---~~-~~----- 71 (109)
T 3tco_A 10 TEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVD--------ENQKI---AD-KY----- 71 (109)
T ss_dssp CTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETT--------TCHHH---HH-HT-----
T ss_pred cHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEccc--------cCHHH---HH-hc-----
Confidence 34434322235899999999999999999999999999999864 899999875 11221 11 11
Q ss_pred eeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 101 IFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 101 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 72 ------------------------~i--~~~P---t~~~~-~~g~~~~~~~g~~~~~~l~~~ 103 (109)
T 3tco_A 72 ------------------------SV--LNIP---TTLIF-VNGQLVDSLVGAVDEDTLEST 103 (109)
T ss_dssp ------------------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred ------------------------Cc--ccCC---EEEEE-cCCcEEEeeeccCCHHHHHHH
Confidence 12 5566 88888 899999999998888777654
No 127
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.47 E-value=7.5e-14 Score=89.38 Aligned_cols=84 Identities=23% Similarity=0.311 Sum_probs=62.7
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
.++++++|.||++||++|+...|.+.++.+++++ +.++.|++++ ...++. . ++
T Consensus 22 ~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~-------~~~~~~---~-~~-------------- 74 (111)
T 2pu9_C 22 AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQ-------ENKTLA---K-EL-------------- 74 (111)
T ss_dssp CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSS-------TTHHHH---H-HH--------------
T ss_pred cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCc-------chHHHH---H-Hc--------------
Confidence 4689999999999999999999999999999874 8999998751 111111 1 11
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| + ++++++|+++.++.|.. .+++.+.
T Consensus 75 ---------------~v--~~~P---t-~~~~~~G~~~~~~~G~~-~~~l~~~ 105 (111)
T 2pu9_C 75 ---------------GI--RVVP---T-FKILKENSVVGEVTGAK-YDKLLEA 105 (111)
T ss_dssp ---------------CC--SBSS---E-EEEESSSSEEEEEESSC-HHHHHHH
T ss_pred ---------------CC--Ceee---E-EEEEeCCcEEEEEcCCC-HHHHHHH
Confidence 22 5667 6 77779999999988874 6666553
No 128
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.47 E-value=7.7e-14 Score=88.70 Aligned_cols=84 Identities=23% Similarity=0.287 Sum_probs=65.4
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...|.+.++.++++++ +.++.|+++. ..+ .+. ++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~----~~~-~~--------------- 70 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG----TAP-KY--------------- 70 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CTT----HHH-HT---------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CHH----HHH-Hc---------------
Confidence 5789999999999999999999999999998764 9999998752 111 111 10
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 71 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 102 (108)
T 2trx_A 71 --------------GI--RGIP---TLLLF-KNGEVAATKVGALSKGQLKEF 102 (108)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred --------------CC--cccC---EEEEE-eCCEEEEEEecCCCHHHHHHH
Confidence 22 4566 88888 899999999998888777654
No 129
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.47 E-value=7.1e-14 Score=89.48 Aligned_cols=82 Identities=11% Similarity=0.227 Sum_probs=63.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...|.+.++.+++++ +.++.|+++ ...++ +. ++
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~--------~~~~l---~~-~~--------------- 73 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVD--------ELGDV---AQ-KN--------------- 73 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETT--------TCHHH---HH-HT---------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECC--------CCHHH---HH-Hc---------------
Confidence 589999999999999999999999999999865 899999875 11111 11 21
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| ++++++ +|+++.++.|. +++++++.
T Consensus 74 --------------~v--~~~P---t~~~~~-~G~~~~~~~G~-~~~~l~~~ 104 (109)
T 3f3q_A 74 --------------EV--SAMP---TLLLFK-NGKEVAKVVGA-NPAAIKQA 104 (109)
T ss_dssp --------------TC--CSSS---EEEEEE-TTEEEEEEESS-CHHHHHHH
T ss_pred --------------CC--CccC---EEEEEE-CCEEEEEEeCC-CHHHHHHH
Confidence 22 5566 888887 89999998887 55666654
No 130
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.47 E-value=1.4e-14 Score=94.24 Aligned_cols=110 Identities=16% Similarity=0.195 Sum_probs=70.0
Q ss_pred cccccCCCcccceEEecCCCCeeecccc--CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCC
Q 031257 3 SQFIQNPESIFDLSVKDARGHEVDLSTY--KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (163)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~ 80 (163)
......+.+.+.+.+.+.++-.-.+.+. ++++++|.||++||++|+...+.|.++.+++++ +.++.|+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~----- 75 (122)
T 2vlu_A 3 ASATAAAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE----- 75 (122)
T ss_dssp ---------CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-----
T ss_pred ccccccCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC-----
Confidence 3344555566666655443322223332 578999999999999999999999999999875 9999998751
Q ss_pred CCCHHHHHHHHHhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhh
Q 031257 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (163)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~ 160 (163)
. .+ .+. ++ |+ .++| +++++ ++|+++.++.|.. .+++.
T Consensus 76 --~-~~---~~~-~~-----------------------------~v--~~~P---t~~~~-~~G~~~~~~~G~~-~~~l~ 112 (122)
T 2vlu_A 76 --L-KP---IAE-QF-----------------------------SV--EAMP---TFLFM-KEGDVKDRVVGAI-KEELT 112 (122)
T ss_dssp --C-HH---HHH-HT-----------------------------TC--CSSS---EEEEE-ETTEEEEEEESSC-HHHHH
T ss_pred --C-HH---HHH-Hc-----------------------------CC--Cccc---EEEEE-eCCEEEEEEeCcC-HHHHH
Confidence 1 11 111 11 22 5566 75555 8999999988877 76666
Q ss_pred hc
Q 031257 161 VI 162 (163)
Q Consensus 161 ~~ 162 (163)
+.
T Consensus 113 ~~ 114 (122)
T 2vlu_A 113 AK 114 (122)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 131
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.47 E-value=6.9e-14 Score=103.83 Aligned_cols=84 Identities=18% Similarity=0.263 Sum_probs=65.5
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
.+++++||+||++||++|+...|.+.++.++++++ +.++.|+++. .. +... ++
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~-------~~----~~~~-~~-------------- 76 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDA-------EQ----MIAA-QF-------------- 76 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTT-------CH----HHHH-TT--------------
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCcc-------CH----HHHH-Hc--------------
Confidence 35899999999999999999999999999999865 9999999861 11 1111 21
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhh
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEV 161 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (163)
|+ .++| +++++ ++|+++.++.|..+.+.+.+
T Consensus 77 ---------------~v--~~~P---t~~~~-~~G~~~~~~~g~~~~~~l~~ 107 (287)
T 3qou_A 77 ---------------GL--RAIP---TVYLF-QNGQPVDGFQGPQPEEAIRA 107 (287)
T ss_dssp ---------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHH
T ss_pred ---------------CC--CCCC---eEEEE-ECCEEEEEeeCCCCHHHHHH
Confidence 22 5666 88888 78999999999887766654
No 132
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.47 E-value=9.4e-14 Score=88.18 Aligned_cols=83 Identities=19% Similarity=0.282 Sum_probs=63.2
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...|.+.++.++++ ++.++.|+++. .. ++ +. +
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------~~-~l---~~-~---------------- 66 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------MQ-EI---AG-R---------------- 66 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------C---------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------CH-HH---HH-h----------------
Confidence 57899999999999999999999999999984 49999998862 11 11 00 1
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
| ++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 67 -----~--------~v--~~~P---t~~~~-~~G~~~~~~~g~~~~~~l~~~ 99 (105)
T 4euy_A 67 -----Y--------AV--FTGP---TVLLF-YNGKEILRESRFISLENLERT 99 (105)
T ss_dssp ------------------CCCC---EEEEE-ETTEEEEEEESSCCHHHHHHH
T ss_pred -----c--------CC--CCCC---EEEEE-eCCeEEEEEeCCcCHHHHHHH
Confidence 1 22 5667 88888 589999999998888877654
No 133
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.46 E-value=1.3e-13 Score=88.22 Aligned_cols=85 Identities=18% Similarity=0.250 Sum_probs=65.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...|.+.++.+++++. +.++.|+++ ... + .+. ++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~-------~~~-~---~~~-~~--------------- 73 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNID-------ENP-G---TAA-KY--------------- 73 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCH-H---HHH-HT---------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcC-------CCH-H---HHH-hC---------------
Confidence 4789999999999999999999999999999765 999999975 111 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhcC
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (163)
|+ .++| +++++ ++|+++.++.|..+.+++.+.|
T Consensus 74 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~l 106 (112)
T 1t00_A 74 --------------GV--MSIP---TLNVY-QGGEVAKTIVGAKPKAAIVRDL 106 (112)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHHT
T ss_pred --------------CC--Cccc---EEEEE-eCCEEEEEEeCCCCHHHHHHHH
Confidence 22 4566 76665 7999999999988887776653
No 134
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.46 E-value=1.6e-13 Score=87.09 Aligned_cols=84 Identities=17% Similarity=0.265 Sum_probs=64.3
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...+.+.++.++++++ +.++.|+++ ... ++ +. ++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~-------~~~-~~---~~-~~--------------- 69 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTD-------ESP-NV---AS-EY--------------- 69 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TCH-HH---HH-HH---------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECC-------CCH-HH---HH-HC---------------
Confidence 4789999999999999999999999999998765 999999875 111 11 11 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 70 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 101 (107)
T 1dby_A 70 --------------GI--RSIP---TIMVF-KGGKKCETIIGAVPKATIVQT 101 (107)
T ss_dssp --------------TC--CSSC---EEEEE-SSSSEEEEEESCCCHHHHHHH
T ss_pred --------------CC--CcCC---EEEEE-eCCEEEEEEeCCCCHHHHHHH
Confidence 22 4566 76666 799999999998887776654
No 135
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.46 E-value=2.2e-13 Score=87.34 Aligned_cols=96 Identities=19% Similarity=0.203 Sum_probs=70.4
Q ss_pred cCCCCeeeccc-cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCC
Q 031257 19 DARGHEVDLST-YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS 97 (163)
Q Consensus 19 ~~~G~~~~l~~-~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (163)
.++++.+...- -+++++||.||++||++|+...+.+.++.++++++ +.++.|+++. .. + .+. ++
T Consensus 11 ~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~-~---~~~-~~-- 75 (115)
T 1thx_A 11 TITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP-------NP-T---TVK-KY-- 75 (115)
T ss_dssp ECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT-------CH-H---HHH-HT--
T ss_pred EeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC-------CH-H---HHH-Hc--
Confidence 34444443222 25789999999999999999999999999999865 9999999851 11 1 111 11
Q ss_pred ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 98 EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 98 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 76 ---------------------------~v--~~~P---t~~~~-~~G~~~~~~~g~~~~~~l~~~ 107 (115)
T 1thx_A 76 ---------------------------KV--EGVP---ALRLV-KGEQILDSTEGVISKDKLLSF 107 (115)
T ss_dssp ---------------------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred ---------------------------CC--Ccee---EEEEE-cCCEEEEEecCCCCHHHHHHH
Confidence 22 4566 88888 899999999998887777654
No 136
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.45 E-value=1.7e-14 Score=95.83 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=61.6
Q ss_pred eccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeee
Q 031257 26 DLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKI 105 (163)
Q Consensus 26 ~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (163)
.+++.+|+++||.||++||++|+...|.+.++.+++ ++.++.|+++ ...++ +. ++
T Consensus 34 ~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~--------~~~~l---~~-~~---------- 88 (133)
T 3cxg_A 34 VFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVD--------IHPKL---ND-QH---------- 88 (133)
T ss_dssp HHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETT--------TCHHH---HH-HT----------
T ss_pred HHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEecc--------chHHH---HH-hc----------
Confidence 355667899999999999999999999999887766 4888888865 11111 11 11
Q ss_pred ecCCCcchhHHHHhHhCCCcccCCccccCeeEEEE-CCCCc--EEEEeCCCCCcchhhhc
Q 031257 106 DVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLV-DKNGQ--VVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 106 d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~li-d~~G~--i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ |++|+ ++.++.|. +.+++.+.
T Consensus 89 -------------------~v--~~~P---t~~~~~~~~g~g~~~~~~~G~-~~~~l~~~ 123 (133)
T 3cxg_A 89 -------------------NI--KALP---TFEFYFNLNNEWVLVHTVEGA-NQNDIEKA 123 (133)
T ss_dssp -------------------TC--CSSS---EEEEEEEETTEEEEEEEEESC-CHHHHHHH
T ss_pred -------------------CC--CCCC---EEEEEEecCCCeEEEEEEcCC-CHHHHHHH
Confidence 22 5566 88888 45566 99888887 66666654
No 137
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.45 E-value=1.3e-13 Score=89.48 Aligned_cols=84 Identities=15% Similarity=0.247 Sum_probs=65.3
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...+.|.++.+++.+. +.++.|+++. ..+ .++ ++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~~vd~d~--------~~~---l~~-~~--------------- 81 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMAKVDIDD--------HTD---LAI-EY--------------- 81 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEETTT--------THH---HHH-HT---------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCCC--------CHH---HHH-Hc---------------
Confidence 5789999999999999999999999999998764 9999998751 111 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 82 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 113 (119)
T 1w4v_A 82 --------------EV--SAVP---TVLAM-KNGDVVDKFVGIKDEDQLEAF 113 (119)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred --------------CC--Cccc---EEEEE-eCCcEEEEEcCCCCHHHHHHH
Confidence 22 4566 88888 899999999998887777654
No 138
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.45 E-value=2.4e-13 Score=89.63 Aligned_cols=62 Identities=27% Similarity=0.205 Sum_probs=48.3
Q ss_pred cceEEecCCCCeeecccc-CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC-CeEEEEEecC
Q 031257 13 FDLSVKDARGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCN 74 (163)
Q Consensus 13 p~f~l~~~~G~~~~l~~~-~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~-~~~ii~is~d 74 (163)
++-.+..++++.+...-. +++++||.||++||++|+...|.|.++.+++++. .+.++.|+++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~ 68 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT 68 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC
Confidence 334455566666654433 4899999999999999999999999999999853 5888888764
No 139
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.17 E-value=7.3e-15 Score=96.77 Aligned_cols=97 Identities=9% Similarity=0.163 Sum_probs=70.1
Q ss_pred CCeeeccccCCcEEEEEeccCCCCCChhhHHHH---HHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCc
Q 031257 22 GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE 98 (163)
Q Consensus 22 G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l---~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (163)
.+.+.++..+||++||.||++||++|+...+.+ .++.+.+++ ++.++.|+++. ++..+.+. +
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------~~~~~~~~-~---- 73 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDT---------PEGQELAR-R---- 73 (130)
Confidence 667778888899999999999999999999999 888887765 37788887631 00000100 0
Q ss_pred cceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECC-CCcE--EEEeCCCCCcchhhhcC
Q 031257 99 FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDK-NGQV--VDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 99 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~-~G~i--~~~~~g~~~~~~~~~~l 163 (163)
| ++ .++| +++++|+ +|++ +.++.|..+.+++.+.|
T Consensus 74 -----------------~--------~v--~~~P---t~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l 111 (130)
T 2lst_A 74 -----------------Y--------RV--PGTP---TFVFLVPKAGAWEEVGRLFGSRPRAEFLKEL 111 (130)
Confidence 1 22 4566 9999995 6999 88888887777776543
No 140
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.44 E-value=2.4e-13 Score=87.04 Aligned_cols=84 Identities=7% Similarity=0.132 Sum_probs=60.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...|.+.++.++++..++.++.|+++. .. + ... ++
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~-~---~~~-~~--------------- 72 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE-------NS-E---ISE-LF--------------- 72 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT-------CH-H---HHH-HT---------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc-------CH-H---HHH-Hc---------------
Confidence 478999999999999999999999999998755569999999751 11 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+++.++.|.. ++++.+.
T Consensus 73 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~-~~~l~~~ 103 (112)
T 3d6i_A 73 --------------EI--SAVP---YFIII-HKGTILKELSGAD-PKEYVSL 103 (112)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEECSCC-HHHHHHH
T ss_pred --------------CC--Cccc---EEEEE-ECCEEEEEecCCC-HHHHHHH
Confidence 22 5566 87777 7999999988874 3445543
No 141
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.44 E-value=2.5e-13 Score=89.50 Aligned_cols=84 Identities=25% Similarity=0.309 Sum_probs=65.5
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...|.+.++.++++++ +.++.|+++. .. .
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~-------~~-------------------------~ 85 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP-------------------------G 85 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT-------CC-------------------------T
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH-------------------------H
Confidence 5789999999999999999999999999999764 9999998752 10 0
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
... .| ++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 86 l~~-~~--------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 122 (128)
T 2o8v_B 86 TAP-KY--------GI--RGIP---TLLLF-KNGEVAATKVGALSKGQLKEF 122 (128)
T ss_dssp TSG-GG--------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred HHH-Hc--------CC--CccC---EEEEE-eCCEEEEEEcCCCCHHHHHHH
Confidence 000 01 22 5566 99999 899999999998887777654
No 142
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.9e-13 Score=89.99 Aligned_cols=85 Identities=15% Similarity=0.187 Sum_probs=64.5
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC---CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeec
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD---QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~---~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 107 (163)
.++++||.||++||++|+...|.+.++.+++++ .++.++.|+++. . .+ .+. ++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~-~~---l~~-~~------------ 79 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------N-QV---LAS-RY------------ 79 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT-------C-CH---HHH-HH------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC-------C-HH---HHH-hC------------
Confidence 468999999999999999999999999999872 349999998751 1 11 111 10
Q ss_pred CCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++++ |+++.++.|..+.+++.+.
T Consensus 80 -----------------~v--~~~P---t~~~~~~-g~~~~~~~G~~~~~~l~~~ 111 (133)
T 1x5d_A 80 -----------------GI--RGFP---TIKIFQK-GESPVDYDGGRTRSDIVSR 111 (133)
T ss_dssp -----------------TC--CSSS---EEEEEET-TEEEEEECSCCSHHHHHHH
T ss_pred -----------------CC--CeeC---eEEEEeC-CCceEEecCCCCHHHHHHH
Confidence 22 5666 9999987 9988889998887777654
No 143
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=1.7e-13 Score=89.66 Aligned_cols=83 Identities=17% Similarity=0.188 Sum_probs=62.2
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++ .+||.||++||++|+...|.+.++.+++++.++.++.|+++ ... . .+. ++
T Consensus 22 ~~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~-------~~~-~---~~~-~~--------------- 73 (126)
T 1x5e_A 22 EG-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT-------EQP-G---LSG-RF--------------- 73 (126)
T ss_dssp SS-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT-------TCH-H---HHH-HT---------------
T ss_pred CC-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc-------CCH-H---HHH-Hc---------------
Confidence 44 49999999999999999999999999998766999999875 111 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|++ .++.|..+.+++.+.
T Consensus 74 --------------~v--~~~P---t~~~~-~~G~~-~~~~G~~~~~~l~~~ 104 (126)
T 1x5e_A 74 --------------II--NALP---TIYHC-KDGEF-RRYQGPRTKKDFINF 104 (126)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEE-EECCSCCCHHHHHHH
T ss_pred --------------CC--cccC---EEEEE-eCCeE-EEeecCCCHHHHHHH
Confidence 22 4566 88888 88996 678887777776653
No 144
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.44 E-value=2.3e-13 Score=86.16 Aligned_cols=84 Identities=14% Similarity=0.221 Sum_probs=65.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...+.+.++.+++++ ++.++.|+++. .. . .+. ++
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~-~---~~~-~~--------------- 70 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------NP-E---TPN-AY--------------- 70 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------CC-H---HHH-HT---------------
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------CH-H---HHH-hc---------------
Confidence 578999999999999999999999999999986 49999999752 11 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 71 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 102 (107)
T 2i4a_A 71 --------------QV--RSIP---TLMLV-RDGKVIDKKVGALPKSQLKAW 102 (107)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred --------------CC--CccC---EEEEE-eCCEEEEEecCCCCHHHHHHH
Confidence 22 4566 88888 899999999998887777654
No 145
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.43 E-value=2.5e-13 Score=88.96 Aligned_cols=82 Identities=15% Similarity=0.201 Sum_probs=61.8
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...+.|.++.++++ ++.++.|++| ...+ .++ ++
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d--------~~~~---l~~-~~--------------- 87 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTD--------ELKS---VAS-DW--------------- 87 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETT--------TSHH---HHH-HT---------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECc--------cCHH---HHH-Hc---------------
Confidence 68999999999999999999999999999986 5999999875 1111 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|. +++++.+.
T Consensus 88 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~-~~~~l~~~ 118 (124)
T 1xfl_A 88 --------------AI--QAMP---TFMFL-KEGKILDKVVGA-KKDELQST 118 (124)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESC-CHHHHHHH
T ss_pred --------------CC--CccC---EEEEE-ECCEEEEEEeCC-CHHHHHHH
Confidence 22 5566 75555 899999998884 66666554
No 146
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.43 E-value=5.5e-14 Score=95.74 Aligned_cols=84 Identities=17% Similarity=0.130 Sum_probs=65.5
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...|.|.++.++++++ +.++.|+++. .. + ... ++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~-------~~-~---l~~-~~--------------- 114 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA-------HP-A---VAG-RH--------------- 114 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------ST-H---HHH-HT---------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc-------cH-H---HHH-Hc---------------
Confidence 5789999999999999999999999999999865 9999999751 11 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 115 --------------~i--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 146 (155)
T 2ppt_A 115 --------------RI--QGIP---AFILF-HKGRELARAAGARPASELVGF 146 (155)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred --------------CC--CcCC---EEEEE-eCCeEEEEecCCCCHHHHHHH
Confidence 22 5566 88888 799999999998887777654
No 147
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.43 E-value=2.7e-13 Score=87.84 Aligned_cols=88 Identities=17% Similarity=0.224 Sum_probs=62.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+|++++|.||++||++|+...|.+.++.++++. .+..++++. ..+.+...++.. ++
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~-----~~~~~~~~~~~~-~~--------------- 83 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEE-----PSQLNDLQAFRS-RY--------------- 83 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTC-----GGGHHHHHHHHH-HH---------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCC-----cCcHHHHHHHHH-Hc---------------
Confidence 578999999999999999999999999998753 355555541 011122222222 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 84 --------------~i--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 115 (118)
T 1zma_A 84 --------------GI--PTVP---GFVHI-TDGQINVRCDSSMSAQEIKDF 115 (118)
T ss_dssp --------------TC--CSSC---EEEEE-ETTEEEEECCTTCCHHHHHHH
T ss_pred --------------CC--CCCC---eEEEE-ECCEEEEEecCCCCHHHHHHH
Confidence 22 5666 88888 589999999998888887664
No 148
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.42 E-value=1.8e-13 Score=91.03 Aligned_cols=98 Identities=14% Similarity=0.170 Sum_probs=69.4
Q ss_pred EecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC--CeEEEEEecCCCCCCCCCCHHHHHHHHHhh
Q 031257 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPGSNDQIADFVCTR 94 (163)
Q Consensus 17 l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~--~~~ii~is~d~~~~~~~~~~~~~~~~~~~~ 94 (163)
+..++++.+...-.+++++||.||++||++|+...+.|.++.+++++. ++.++.|+++ .. .. .+. +
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-------~~-~~---~~~-~ 86 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT-------SA-SM---LAS-K 86 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT-------TC-HH---HHH-H
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc-------cc-HH---HHH-H
Confidence 444556555433335789999999999999999999999999999876 3888888764 11 11 111 1
Q ss_pred cCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 95 FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 95 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
+ ++ .++| +++++ ++|+ +.++.|..+.+++.+.
T Consensus 87 ~-----------------------------~v--~~~P---t~~~~-~~G~-~~~~~g~~~~~~l~~~ 118 (140)
T 2dj1_A 87 F-----------------------------DV--SGYP---TIKIL-KKGQ-AVDYDGSRTQEEIVAK 118 (140)
T ss_dssp T-----------------------------TC--CSSS---EEEEE-ETTE-EEECCSCCCHHHHHHH
T ss_pred C-----------------------------CC--CccC---eEEEE-ECCc-EEEcCCCCCHHHHHHH
Confidence 1 22 4566 88888 7899 6678888887777654
No 149
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.42 E-value=6.2e-14 Score=93.33 Aligned_cols=83 Identities=22% Similarity=0.320 Sum_probs=63.0
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
.+|+++||.||++||++|+...|.+.++.++++ ++.++.|+++. . .+ ... ++
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------~-~~---~~~-~~-------------- 95 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------L-SD---FSA-SW-------------- 95 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S-HH---HHH-HT--------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc-------c-HH---HHH-Hc--------------
Confidence 458999999999999999999999999999985 49999999751 1 11 111 11
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+++.++.|. +.+++.+.
T Consensus 96 ---------------~v--~~~P---t~~~~-~~G~~~~~~~G~-~~~~l~~~ 126 (139)
T 3d22_A 96 ---------------EI--KATP---TFFFL-RDGQQVDKLVGA-NKPELHKK 126 (139)
T ss_dssp ---------------TC--CEES---EEEEE-ETTEEEEEEESC-CHHHHHHH
T ss_pred ---------------CC--Cccc---EEEEE-cCCeEEEEEeCC-CHHHHHHH
Confidence 22 4566 77777 899999998887 66666553
No 150
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.42 E-value=1.3e-13 Score=86.65 Aligned_cols=83 Identities=13% Similarity=0.226 Sum_probs=64.4
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...+.+.++.+++++ +.++.++++. .. + ... ++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~-------~~-~---~~~-~~--------------- 65 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE-------NP-D---IAA-RY--------------- 65 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH-H---HHH-HT---------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC-------CH-H---HHH-hC---------------
Confidence 578999999999999999999999999999876 9999998751 11 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 66 --------------~v--~~~P---t~~~~-~~g~~~~~~~g~~~~~~l~~~ 97 (104)
T 2e0q_A 66 --------------GV--MSLP---TVIFF-KDGEPVDEIIGAVPREEIEIR 97 (104)
T ss_dssp --------------TC--CSSC---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred --------------Cc--cccC---EEEEE-ECCeEhhhccCCCCHHHHHHH
Confidence 11 4556 88888 899999999998887777654
No 151
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.42 E-value=1.8e-13 Score=86.47 Aligned_cols=84 Identities=17% Similarity=0.219 Sum_probs=64.4
Q ss_pred ccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 29 TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 29 ~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
+.++++++|.||++||++|+...+.+.++.+++++ +.++.++++ .. .+ ... ++
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~-------~~-~~---~~~-~~------------- 69 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVD-------DC-QD---VAS-ES------------- 69 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETT-------TC-HH---HHH-HT-------------
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhh-------hh-HH---HHH-Hc-------------
Confidence 34689999999999999999999999999999865 899999875 11 11 111 11
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|. +.+++.+.
T Consensus 70 ----------------~v--~~~P---t~~~~-~~g~~~~~~~g~-~~~~l~~~ 100 (105)
T 3m9j_A 70 ----------------EV--KSMP---TFQFF-KKGQKVGEFSGA-NKEKLEAT 100 (105)
T ss_dssp ----------------TC--CBSS---EEEEE-ETTEEEEEEESS-CHHHHHHH
T ss_pred ----------------CC--CcCc---EEEEE-ECCeEEEEEeCC-CHHHHHHH
Confidence 12 5566 88888 789999999998 77776654
No 152
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.42 E-value=1.7e-13 Score=86.97 Aligned_cols=84 Identities=15% Similarity=0.210 Sum_probs=65.2
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...+.+.++.++++++ +.++.|+++. .. + ..+ ++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~-~---~~~-~~--------------- 68 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVDE-------NP-K---TAM-RY--------------- 68 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH-H---HHH-HT---------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECCC-------CH-h---HHH-hC---------------
Confidence 5789999999999999999999999999999864 9999999751 11 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 69 --------------~v--~~~P---t~~~~-~~g~~~~~~~g~~~~~~l~~~ 100 (109)
T 2yzu_A 69 --------------RV--MSIP---TVILF-KDGQPVEVLVGAQPKRNYQAK 100 (109)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred --------------CC--CcCC---EEEEE-eCCcEeeeEeCCCCHHHHHHH
Confidence 22 4566 88888 899999999998887777654
No 153
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.42 E-value=9.5e-14 Score=92.81 Aligned_cols=84 Identities=8% Similarity=0.034 Sum_probs=65.2
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
.++++||.||++||++|+...+.+.++.++++++ +.++.|+++ .. .++ +. ++
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~-------~~-~~l---~~-~~--------------- 74 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIA-------TN-PWT---AE-KY--------------- 74 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETT-------TC-HHH---HH-HH---------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECC-------cC-HhH---HH-HC---------------
Confidence 4789999999999999999999999999999875 999999975 12 221 11 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 75 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 106 (140)
T 3hz4_A 75 --------------GV--QGTP---TFKFF-CHGRPVWEQVGQIYPSILKNA 106 (140)
T ss_dssp --------------TC--CEES---EEEEE-ETTEEEEEEESSCCHHHHHHH
T ss_pred --------------CC--CcCC---EEEEE-eCCcEEEEEcCCCCHHHHHHH
Confidence 12 5566 76776 789999999998887777654
No 154
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.41 E-value=2.3e-13 Score=87.85 Aligned_cols=82 Identities=20% Similarity=0.261 Sum_probs=62.4
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+|+++||.||++||++|+...+.|.++.+++++ +.++.|+++. .. + .+. ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~-------~~-~---l~~-~~--------------- 79 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE-------SP-D---IAK-EC--------------- 79 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT-------CH-H---HHH-HT---------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH-H---HHH-HC---------------
Confidence 578999999999999999999999999999876 9999998751 11 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|.. ++++.+.
T Consensus 80 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~~-~~~l~~~ 110 (114)
T 2oe3_A 80 --------------EV--TAMP---TFVLG-KDGQLIGKIIGAN-PTALEKG 110 (114)
T ss_dssp --------------TC--CSBS---EEEEE-ETTEEEEEEESSC-HHHHHHH
T ss_pred --------------CC--Cccc---EEEEE-eCCeEEEEEeCCC-HHHHHHH
Confidence 22 5566 76555 8999999988877 7776654
No 155
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.41 E-value=2e-13 Score=86.16 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=68.7
Q ss_pred cCCCCeeecccc-CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCC
Q 031257 19 DARGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS 97 (163)
Q Consensus 19 ~~~G~~~~l~~~-~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (163)
+.+++.+...-. .+++++|.||++||++|+...+.+.++.++++++ +.++.++++ .. .+ .+. ++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~-------~~-~~---~~~-~~-- 68 (105)
T 1fb6_A 4 DVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTD-------EA-PG---IAT-QY-- 68 (105)
T ss_dssp ECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-------TC-HH---HHH-HT--
T ss_pred echhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCc-------ch-HH---HHH-hC--
Confidence 445554443222 4789999999999999999999999999998765 999999875 11 11 111 11
Q ss_pred ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 98 EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 98 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 69 ---------------------------~v--~~~P---t~~~~-~~g~~~~~~~G~~~~~~l~~~ 100 (105)
T 1fb6_A 69 ---------------------------NI--RSIP---TVLFF-KNGERKESIIGAVPKSTLTDS 100 (105)
T ss_dssp ---------------------------TC--CSSS---EEEEE-ETTEEEEEEEECCCHHHHHHH
T ss_pred ---------------------------CC--Cccc---EEEEE-eCCeEEEEEecCCCHHHHHHH
Confidence 12 4566 76665 799999999998887776654
No 156
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.41 E-value=4e-13 Score=85.87 Aligned_cols=82 Identities=17% Similarity=0.194 Sum_probs=62.3
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCCc
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEH 111 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 111 (163)
++++||.||++||++|+...+.|.++.+++++ ++.++.|+++ ...++ +. ++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~--------~~~~~---~~-~~---------------- 74 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVD--------AVAAV---AE-AA---------------- 74 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT--------TTHHH---HH-HH----------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECC--------chHHH---HH-Hc----------------
Confidence 88999999999999999999999999999876 5999999875 11111 11 11
Q ss_pred chhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 112 ASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|. +.+++.+.
T Consensus 75 -------------~v--~~~P---t~~~~-~~G~~~~~~~G~-~~~~l~~~ 105 (112)
T 1ep7_A 75 -------------GI--TAMP---TFHVY-KDGVKADDLVGA-SQDKLKAL 105 (112)
T ss_dssp -------------TC--CBSS---EEEEE-ETTEEEEEEESC-CHHHHHHH
T ss_pred -------------CC--Cccc---EEEEE-ECCeEEEEEcCC-CHHHHHHH
Confidence 22 5566 75554 899999998887 77776654
No 157
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.41 E-value=3e-13 Score=86.70 Aligned_cols=83 Identities=8% Similarity=0.163 Sum_probs=64.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...+.+.++.++++ ++.++.|+++ .. .+ ... ++
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~-------~~-~~---l~~-~~--------------- 68 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSE-------AR-PE---LMK-EL--------------- 68 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGG-------GC-HH---HHH-HT---------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCc-------CC-HH---HHH-Hc---------------
Confidence 56899999999999999999999999998876 4888888874 11 11 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+++.++.|..+++++.+.
T Consensus 69 --------------~v--~~~P---t~~~~-~~G~~v~~~~G~~~~~~l~~~ 100 (110)
T 2l6c_A 69 --------------GF--ERVP---TLVFI-RDGKVAKVFSGIMNPRELQAL 100 (110)
T ss_dssp --------------TC--CSSC---EEEEE-ESSSEEEEEESCCCHHHHHHH
T ss_pred --------------CC--cccC---EEEEE-ECCEEEEEEcCCCCHHHHHHH
Confidence 22 5566 88888 899999999998888887654
No 158
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.40 E-value=2.4e-13 Score=88.57 Aligned_cols=84 Identities=20% Similarity=0.228 Sum_probs=64.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...+.+.++.+++++.++.++.|+++. .. ++ +. ++
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~-------~~-~~---~~-~~--------------- 84 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE-------QS-QI---AQ-EV--------------- 84 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT-------CH-HH---HH-HH---------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC-------CH-HH---HH-Hc---------------
Confidence 578999999999999999999999999998877679999999751 11 11 11 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|. +.+++.+.
T Consensus 85 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~-~~~~l~~~ 115 (121)
T 2j23_A 85 --------------GI--RAMP---TFVFF-KNGQKIDTVVGA-DPSKLQAA 115 (121)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESS-CHHHHHHH
T ss_pred --------------CC--Cccc---EEEEE-ECCeEEeeEcCC-CHHHHHHH
Confidence 12 5566 77777 699999998887 77777654
No 159
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.40 E-value=6.2e-14 Score=99.86 Aligned_cols=97 Identities=15% Similarity=0.225 Sum_probs=71.1
Q ss_pred ecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCC
Q 031257 18 KDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS 97 (163)
Q Consensus 18 ~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (163)
.+++++.+.....+++++||.||++||++|+...|.+.++.+++++. +.++.|+++. . .. .+. ++
T Consensus 100 ~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~-------~-~~---l~~-~~-- 164 (210)
T 3apq_A 100 ITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGD-------D-RM---LCR-MK-- 164 (210)
T ss_dssp EECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------C-HH---HHH-HT--
T ss_pred EEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCc-------c-HH---HHH-Hc--
Confidence 33444444333346899999999999999999999999999999765 9999998751 1 11 111 11
Q ss_pred ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 98 EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 98 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 165 ---------------------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 196 (210)
T 3apq_A 165 ---------------------------GV--NSYP---SLFIF-RSGMAAVKYNGDRSKESLVAF 196 (210)
T ss_dssp ---------------------------TC--CSSS---EEEEE-CTTSCCEECCSCCCHHHHHHH
T ss_pred ---------------------------CC--CcCC---eEEEE-ECCCceeEecCCCCHHHHHHH
Confidence 22 5566 88888 899999999998887777654
No 160
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.40 E-value=4.8e-13 Score=85.30 Aligned_cols=84 Identities=14% Similarity=0.251 Sum_probs=65.3
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...+.+.++.++++++ +.++.|+++ . ...+ +. ++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~-------~-~~~l---~~-~~--------------- 72 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVE-------E-EKTL---FQ-RF--------------- 72 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETT-------T-CHHH---HH-HT---------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECC-------c-ChhH---HH-hc---------------
Confidence 5689999999999999999999999999999864 999999975 1 1211 11 21
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 73 --------------~v--~~~P---t~~~~-~~g~~~~~~~g~~~~~~l~~~ 104 (111)
T 3gnj_A 73 --------------SL--KGVP---QILYF-KDGEYKGKMAGDVEDDEVEQM 104 (111)
T ss_dssp --------------TC--CSSC---EEEEE-ETTEEEEEEESSCCHHHHHHH
T ss_pred --------------CC--CcCC---EEEEE-ECCEEEEEEeccCCHHHHHHH
Confidence 11 4566 88888 789999999998887777654
No 161
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.40 E-value=4.1e-13 Score=87.56 Aligned_cols=84 Identities=21% Similarity=0.294 Sum_probs=62.0
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
.++++++|.||++||++|+...|.+.++.+++++ +.++.+++++ ...++ .+ ++
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~-------~~~~~---~~-~~-------------- 87 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQ-------ENKTL---AK-EL-------------- 87 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSS-------TTHHH---HH-HH--------------
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCc-------chHHH---HH-Hc--------------
Confidence 4689999999999999999999999999999874 8999998741 11111 11 11
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| + ++++++|+++.++.|.. .+++.+.
T Consensus 88 ---------------~v--~~~P---t-~~~~~~G~~~~~~~G~~-~~~l~~~ 118 (124)
T 1faa_A 88 ---------------GI--RVVP---T-FKILKENSVVGEVTGAK-YDKLLEA 118 (124)
T ss_dssp ---------------CC--SSSS---E-EEEEETTEEEEEEESSC-HHHHHHH
T ss_pred ---------------CC--Ceee---E-EEEEeCCcEEEEEcCCC-HHHHHHH
Confidence 22 5667 6 66668999999988865 6666543
No 162
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.40 E-value=7.1e-16 Score=106.12 Aligned_cols=60 Identities=8% Similarity=0.065 Sum_probs=44.9
Q ss_pred cceEEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 13 FDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 13 p~f~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+++.+.+.+ +.+.....+||++||.||++||++|+.+.|.|.++.+.+.. ++.++.|+++
T Consensus 28 ~~i~w~~~~-~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d 87 (164)
T 1sen_A 28 DHIHWRTLE-DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLE 87 (164)
T ss_dssp TTSCBCCHH-HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEE
T ss_pred ccccccCHH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEec
Confidence 445554444 44556666899999999999999999999999997665543 3677777765
No 163
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.39 E-value=1.5e-12 Score=83.22 Aligned_cols=82 Identities=16% Similarity=0.263 Sum_probs=61.9
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++++++|.||++||++|+...+.+.++.++++ ++.++.|+++ ... ++. . +
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~-------~~~-~~~---~-~---------------- 74 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVD-------ELK-AVA---E-E---------------- 74 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETT-------TCH-HHH---H-H----------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcc-------ccH-HHH---H-h----------------
Confidence 58999999999999999999999999999986 4999999875 121 111 1 1
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
| |+ .++| +++++ ++|+++.++.| .+++++.+.
T Consensus 75 -----~--------~v--~~~P---t~~~~-~~G~~~~~~~g-~~~~~l~~~ 106 (113)
T 1ti3_A 75 -----W--------NV--EAMP---TFIFL-KDGKLVDKTVG-ADKDGLPTL 106 (113)
T ss_dssp -----H--------HC--SSTT---EEEEE-ETTEEEEEEEC-CCTTHHHHH
T ss_pred -----C--------CC--Cccc---EEEEE-eCCEEEEEEec-CCHHHHHHH
Confidence 1 11 5666 77666 79999999888 566666654
No 164
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.39 E-value=8.3e-14 Score=90.50 Aligned_cols=96 Identities=15% Similarity=0.217 Sum_probs=68.9
Q ss_pred ecCCCCeeecc-cc--CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhh
Q 031257 18 KDARGHEVDLS-TY--KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR 94 (163)
Q Consensus 18 ~~~~G~~~~l~-~~--~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~ 94 (163)
.+.+|+..++. .+ .++++||.||++||++|+...+.|.++.+++ .++.++.|+++. . .+ ... +
T Consensus 6 ~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~-------~-~~---~~~-~ 71 (118)
T 2f51_A 6 VHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK-------N-GN---AAD-A 71 (118)
T ss_dssp EEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT-------C-HH---HHH-H
T ss_pred eEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC-------C-HH---HHH-h
Confidence 34566655555 23 4789999999999999999999999999998 459999999751 1 11 111 1
Q ss_pred cCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECC---CCcEEEEeCCCCCcchhhhc
Q 031257 95 FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDK---NGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 95 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~---~G~i~~~~~g~~~~~~~~~~ 162 (163)
+ ++ .++| +++++++ +|+++.++.|..+. ++++.
T Consensus 72 ~-----------------------------~i--~~~P---t~~~~~~~~~~G~~~~~~~G~~~~-~l~~~ 107 (118)
T 2f51_A 72 Y-----------------------------GV--SSIP---ALFFVKKEGNEIKTLDQFVGADVS-RIKAD 107 (118)
T ss_dssp T-----------------------------TC--CSSS---EEEEEEEETTEEEEEEEEESCCHH-HHHHH
T ss_pred c-----------------------------CC--CCCC---EEEEEeCCCCcceEEEeecCCCHH-HHHHH
Confidence 1 22 5566 8889875 49999999986654 45543
No 165
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.38 E-value=6.7e-13 Score=83.86 Aligned_cols=85 Identities=19% Similarity=0.342 Sum_probs=62.6
Q ss_pred ccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 29 TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 29 ~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
+.++++++|.||++||++|+...+.+.++.++++. ++.++.|+++ .. .+ .+. ++
T Consensus 17 ~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~-------~~-~~---~~~-~~------------- 70 (106)
T 1xwb_A 17 KASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVD-------EC-ED---IAM-EY------------- 70 (106)
T ss_dssp HHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETT-------TC-HH---HHH-HT-------------
T ss_pred hcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEecc-------ch-HH---HHH-Hc-------------
Confidence 34689999999999999999999999999999864 4999999875 11 11 111 11
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.| .+++++.+.
T Consensus 71 ----------------~v--~~~P---t~~~~-~~G~~~~~~~g-~~~~~l~~~ 101 (106)
T 1xwb_A 71 ----------------NI--SSMP---TFVFL-KNGVKVEEFAG-ANAKRLEDV 101 (106)
T ss_dssp ----------------TC--CSSS---EEEEE-ETTEEEEEEES-CCHHHHHHH
T ss_pred ----------------CC--Cccc---EEEEE-cCCcEEEEEcC-CCHHHHHHH
Confidence 22 5566 75555 78999999888 566666553
No 166
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.37 E-value=3.6e-13 Score=87.03 Aligned_cols=85 Identities=19% Similarity=0.289 Sum_probs=62.1
Q ss_pred ccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeee
Q 031257 27 LSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKID 106 (163)
Q Consensus 27 l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 106 (163)
+++.++++++|.||++||++|+...|.+.++.+++ ++.++.|+++ ...+ .++ ++
T Consensus 28 l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~--------~~~~---~~~-~~----------- 81 (117)
T 2xc2_A 28 LEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVD--------KLEE---TAR-KY----------- 81 (117)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETT--------TSHH---HHH-HT-----------
T ss_pred HHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECC--------ccHH---HHH-Hc-----------
Confidence 34447899999999999999999999999999887 5899999875 1111 111 11
Q ss_pred cCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 107 VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+++.++.| .+++++.+.
T Consensus 82 ------------------~v--~~~P---t~~~~-~~G~~~~~~~G-~~~~~l~~~ 112 (117)
T 2xc2_A 82 ------------------NI--SAMP---TFIAI-KNGEKVGDVVG-ASIAKVEDM 112 (117)
T ss_dssp ------------------TC--CSSS---EEEEE-ETTEEEEEEES-SCHHHHHHH
T ss_pred ------------------CC--Cccc---eEEEE-eCCcEEEEEeC-CCHHHHHHH
Confidence 22 5666 75555 79999999888 566666553
No 167
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.37 E-value=5.4e-13 Score=88.59 Aligned_cols=90 Identities=12% Similarity=0.169 Sum_probs=61.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
++ ++||.||++||++|+.+.|.+.++.++++ +.++.|+++. ........+. .
T Consensus 31 ~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~-----~~~~~~~d~~-~------------------ 82 (135)
T 3emx_A 31 QG-DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGS-----LIGERELSAA-R------------------ 82 (135)
T ss_dssp TS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECT-----TCCHHHHHHH-H------------------
T ss_pred CC-cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCC-----chhhhhhhhh-H------------------
Confidence 45 89999999999999999999999998875 8899998752 1111111100 0
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.+...+ ++ .++| ++++++ +|+++.++.|..+.+.+.+.
T Consensus 83 ---~l~~~~-----~v--~~~P---t~~~~~-~G~~v~~~~G~~~~~~~~~~ 120 (135)
T 3emx_A 83 ---LEMNKA-----GV--EGTP---TLVFYK-EGRIVDKLVGATPWSLKVEK 120 (135)
T ss_dssp ---HHHHHH-----TC--CSSS---EEEEEE-TTEEEEEEESCCCHHHHHHH
T ss_pred ---HHHHHc-----CC--ceeC---eEEEEc-CCEEEEEEeCCCCHHHHHHH
Confidence 000000 33 5666 766665 99999999998887766543
No 168
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.37 E-value=8.4e-13 Score=83.11 Aligned_cols=83 Identities=16% Similarity=0.312 Sum_probs=62.0
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
.++++++|.||++||++|+...+.+.++.++++ ++.++.|+++ .. .+ .+. ++
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~-~~---~~~-~~-------------- 68 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVD-------QN-EE---AAA-KY-------------- 68 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT-------TC-HH---HHH-HT--------------
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEecc-------CC-HH---HHH-Hc--------------
Confidence 468999999999999999999999999999986 5999999875 11 11 111 11
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.| .+.+++.+.
T Consensus 69 ---------------~v--~~~P---t~~~~-~~g~~~~~~~G-~~~~~l~~~ 99 (104)
T 2vim_A 69 ---------------SV--TAMP---TFVFI-KDGKEVDRFSG-ANETKLRET 99 (104)
T ss_dssp ---------------TC--CSSS---EEEEE-ETTEEEEEEES-SCHHHHHHH
T ss_pred ---------------CC--cccc---EEEEE-eCCcEEEEEeC-CCHHHHHHH
Confidence 22 4566 76666 58999999888 566666553
No 169
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.36 E-value=1.7e-12 Score=83.99 Aligned_cols=85 Identities=20% Similarity=0.209 Sum_probs=65.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
.++++||.||++||++|+...+.+.++.+++++. +.++.|+++. .. + .+. ++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~-~---~~~-~~--------------- 80 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVAKLDVDT-------NP-E---TAR-NF--------------- 80 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-H---HHH-HT---------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH-H---HHH-hc---------------
Confidence 4789999999999999999999999999998764 9999999751 11 1 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhcC
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.|
T Consensus 81 --------------~i--~~~P---t~~~~-~~g~~~~~~~G~~~~~~l~~~l 113 (121)
T 2i1u_A 81 --------------QV--VSIP---TLILF-KDGQPVKRIVGAKGKAALLREL 113 (121)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHHT
T ss_pred --------------CC--CcCC---EEEEE-ECCEEEEEecCCCCHHHHHHHH
Confidence 22 4566 77766 5999999999988887776643
No 170
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.36 E-value=1e-12 Score=83.64 Aligned_cols=85 Identities=18% Similarity=0.252 Sum_probs=64.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC--CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~--~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
+++++||.||++||++|+...+.+.++.+++... ++.++.++++ ...+ .+. ++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--------~~~~---l~~-~~------------- 74 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT--------AERN---ICS-KY------------- 74 (111)
T ss_dssp HSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT--------TCHH---HHH-HT-------------
T ss_pred cCCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc--------ccHh---HHH-hc-------------
Confidence 3789999999999999999999999999987644 6889999875 1122 111 21
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 75 ----------------~v--~~~P---t~~~~-~~g~~~~~~~g~~~~~~l~~~ 106 (111)
T 3uvt_A 75 ----------------SV--RGYP---TLLLF-RGGKKVSEHSGGRDLDSLHRF 106 (111)
T ss_dssp ----------------TC--CSSS---EEEEE-ETTEEEEEECSCCSHHHHHHH
T ss_pred ----------------CC--Cccc---EEEEE-eCCcEEEeccCCcCHHHHHHH
Confidence 22 5566 76666 789999999998888877654
No 171
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.36 E-value=8.9e-13 Score=89.35 Aligned_cols=81 Identities=11% Similarity=0.123 Sum_probs=61.7
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...|.+.++.++++ ++.++.|+++. . .+ .+. ++
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~-------~-~~---l~~-~~--------------- 81 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG-------V-PE---VSE-KY--------------- 81 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S-HH---HHH-HT---------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC-------C-HH---HHH-Hc---------------
Confidence 48999999999999999999999999999984 49999998751 1 11 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhh
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEV 161 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (163)
++ .++| ++++++ +|+++.++.|. +.+++.+
T Consensus 82 --------------~v--~~~P---t~~~~~-~G~~~~~~~G~-~~~~l~~ 111 (153)
T 2wz9_A 82 --------------EI--SSVP---TFLFFK-NSQKIDRLDGA-HAPELTK 111 (153)
T ss_dssp --------------TC--CSSS---EEEEEE-TTEEEEEEESS-CHHHHHH
T ss_pred --------------CC--CCCC---EEEEEE-CCEEEEEEeCC-CHHHHHH
Confidence 22 5566 999998 99999988885 5555554
No 172
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.36 E-value=8.6e-13 Score=86.62 Aligned_cols=82 Identities=7% Similarity=0.136 Sum_probs=61.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...|.|.++.++++ ++.++.|+++. . .+ .+. ++
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~-------~-~~---l~~-~~--------------- 86 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN-------N-SE---IVS-KC--------------- 86 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT-------C-HH---HHH-HT---------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC-------C-HH---HHH-Hc---------------
Confidence 67899999999999999999999999999985 49999999751 1 11 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.| .+++++.+.
T Consensus 87 --------------~v--~~~P---t~~i~-~~G~~~~~~~G-~~~~~l~~~ 117 (125)
T 1r26_A 87 --------------RV--LQLP---TFIIA-RSGKMLGHVIG-ANPGMLRQK 117 (125)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEES-SCHHHHHHH
T ss_pred --------------CC--Cccc---EEEEE-eCCeEEEEEeC-CCHHHHHHH
Confidence 22 5566 75555 89999999888 566666654
No 173
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.35 E-value=1.2e-12 Score=83.96 Aligned_cols=82 Identities=13% Similarity=0.173 Sum_probs=61.9
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...+.+.++.++++ ++.++.|+++ .... .+. ++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~--------~~~~---~~~-~~--------------- 75 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVD--------EVSE---VTE-KE--------------- 75 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT--------TTHH---HHH-HT---------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECC--------CCHH---HHH-Hc---------------
Confidence 57899999999999999999999999999986 3999999875 1111 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|. +.+++.+.
T Consensus 76 --------------~v--~~~P---t~~~~-~~G~~~~~~~G~-~~~~l~~~ 106 (112)
T 1syr_A 76 --------------NI--TSMP---TFKVY-KNGSSVDTLLGA-NDSALKQL 106 (112)
T ss_dssp --------------TC--CSSS---EEEEE-ETTEEEEEEESC-CHHHHHHH
T ss_pred --------------CC--Cccc---EEEEE-ECCcEEEEEeCC-CHHHHHHH
Confidence 22 5566 75555 699999998888 77777654
No 174
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.35 E-value=9.4e-13 Score=83.65 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=38.5
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++++++|.||++||++|+...|.+.++.++++ ++.++.|+++
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~ 61 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVH 61 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETT
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECc
Confidence 57899999999999999999999999999984 4999999875
No 175
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.34 E-value=2.4e-12 Score=85.80 Aligned_cols=96 Identities=16% Similarity=0.216 Sum_probs=63.3
Q ss_pred cCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCc
Q 031257 19 DARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE 98 (163)
Q Consensus 19 ~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (163)
.++++.+...-.+++.+||.||++||++|+...+.+.++.+++++. +.++.|+++. . .+ ... ++
T Consensus 37 ~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~-~~---l~~-~~--- 100 (140)
T 1v98_A 37 EADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVDE-------H-PG---LAA-RY--- 100 (140)
T ss_dssp ------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------C-HH---HHH-HT---
T ss_pred cCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCC-------C-HH---HHH-HC---
Confidence 3445444433223334999999999999999999999999999864 9999999751 1 11 111 11
Q ss_pred cceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 99 FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 99 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 101 --------------------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 132 (140)
T 1v98_A 101 --------------------------GV--RSVP---TLVLF-RRGAPVATWVGASPRRVLEER 132 (140)
T ss_dssp --------------------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred --------------------------CC--CccC---EEEEE-eCCcEEEEEeCCCCHHHHHHH
Confidence 22 4566 87777 799999999998887776654
No 176
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.34 E-value=9.7e-13 Score=86.27 Aligned_cols=100 Identities=7% Similarity=-0.010 Sum_probs=68.4
Q ss_pred EecCCCCeeecccc-CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC----CCeEEEEEecCCCCCCCCCCHHHHHHHH
Q 031257 17 VKDARGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSNDQIADFV 91 (163)
Q Consensus 17 l~~~~G~~~~l~~~-~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~----~~~~ii~is~d~~~~~~~~~~~~~~~~~ 91 (163)
+..++++.+...-. .++++||.||++||++|+...|.+.++.+++.. .++.++.|+++ ...+ .+
T Consensus 17 v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~--------~~~~---l~ 85 (127)
T 3h79_A 17 VVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE--------KYPD---VI 85 (127)
T ss_dssp CEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT--------TCHH---HH
T ss_pred eEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc--------ccHh---HH
Confidence 44455554443222 478999999999999999999999999987752 24899999875 1112 11
Q ss_pred HhhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEE-EEeCCCCCcchhhhc
Q 031257 92 CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV-DRYYPTTSLLSLEVI 162 (163)
Q Consensus 92 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~-~~~~g~~~~~~~~~~ 162 (163)
. ++ ++ .++| +++++++.+++. ..+.|..+.+.+.+.
T Consensus 86 ~-~~-----------------------------~v--~~~P---t~~~~~~g~~~~~~~~~G~~~~~~l~~~ 122 (127)
T 3h79_A 86 E-RM-----------------------------RV--SGFP---TMRYYTRIDKQEPFEYSGQRYLSLVDSF 122 (127)
T ss_dssp H-HT-----------------------------TC--CSSS---EEEEECSSCSSSCEECCSCCCHHHHHHH
T ss_pred H-hc-----------------------------CC--ccCC---EEEEEeCCCCCCceEecCCccHHHHHHH
Confidence 1 21 12 5566 889998777653 457787777777654
No 177
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.33 E-value=5.1e-13 Score=95.96 Aligned_cols=84 Identities=24% Similarity=0.312 Sum_probs=64.7
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...|.+.++.++++++ +.++.|+++. .. .+ + ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~-~l---~-~~---------------- 79 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP-GT---A-PK---------------- 79 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CT-TT---G-GG----------------
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------CH-HH---H-HH----------------
Confidence 5789999999999999999999999999999875 9999998752 10 00 0 01
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
| ++ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 80 -----~--------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 112 (222)
T 3dxb_A 80 -----Y--------GI--RGIP---TLLLF-KNGEVAATKVGALSKGQLKEF 112 (222)
T ss_dssp -----G--------TC--CSBS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred -----c--------CC--CcCC---EEEEE-ECCeEEEEeccccChHHHHHH
Confidence 1 22 5667 87777 589999999998887777654
No 178
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.32 E-value=5.3e-12 Score=83.81 Aligned_cols=82 Identities=11% Similarity=0.142 Sum_probs=64.6
Q ss_pred cEEEEEeccCCC--CCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 33 KVLLIVNVASKC--GMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 33 k~vlv~f~~s~C--~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++||+|||+|| ++|+...|.|.++.++|.++ +.++-|++| ...++.. ++
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvD--------e~~~la~----~y--------------- 85 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAE--------AERGLMA----RF--------------- 85 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGG--------GHHHHHH----HH---------------
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECC--------CCHHHHH----Hc---------------
Confidence 499999999999 99999999999999999875 999999875 2222221 21
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| |++++ ++|+++.+..|..+.+++.+.
T Consensus 86 --------------gV--~siP---TlilF-kdG~~v~~~vG~~~k~~l~~~ 117 (137)
T 2qsi_A 86 --------------GV--AVCP---SLAVV-QPERTLGVIAKIQDWSSYLAQ 117 (137)
T ss_dssp --------------TC--CSSS---EEEEE-ECCEEEEEEESCCCHHHHHHH
T ss_pred --------------CC--ccCC---EEEEE-ECCEEEEEEeCCCCHHHHHHH
Confidence 22 6677 76666 899999999998888777654
No 179
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.32 E-value=2.3e-12 Score=85.67 Aligned_cols=42 Identities=21% Similarity=0.075 Sum_probs=37.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+|+++||.||++||++|+...|.|.++.+++. ++.++.|+++
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~ 70 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVN 70 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhh
Confidence 35799999999999999999999999999985 3899999875
No 180
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.31 E-value=2.7e-12 Score=82.61 Aligned_cols=82 Identities=17% Similarity=0.259 Sum_probs=61.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (163)
+++++||.||++||++|+...+.+.++.++++ ++.++.|+++ ...+ .+. ++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~--------~~~~---~~~-~~--------------- 77 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVD--------ELKD---VAE-AY--------------- 77 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT--------TSHH---HHH-HT---------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcc--------cCHH---HHH-Hc---------------
Confidence 47899999999999999999999999999986 5999999875 1111 111 11
Q ss_pred cchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| +++++ ++|+++.++.| .+.+++.+.
T Consensus 78 --------------~v--~~~P---t~~~~-~~g~~~~~~~g-~~~~~l~~~ 108 (118)
T 2vm1_A 78 --------------NV--EAMP---TFLFI-KDGEKVDSVVG-GRKDDIHTK 108 (118)
T ss_dssp --------------TC--CSBS---EEEEE-ETTEEEEEEES-CCHHHHHHH
T ss_pred --------------CC--CcCc---EEEEE-eCCeEEEEecC-CCHHHHHHH
Confidence 12 4566 76666 79999998888 466666543
No 181
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.31 E-value=5.2e-12 Score=84.68 Aligned_cols=43 Identities=14% Similarity=-0.042 Sum_probs=39.5
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++++||.||++||++|+...|.+.++.++++++ +.++.|++|
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d 64 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 64 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEccc
Confidence 4789999999999999999999999999999764 999999876
No 182
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.98 E-value=1.8e-13 Score=86.31 Aligned_cols=98 Identities=22% Similarity=0.323 Sum_probs=67.9
Q ss_pred ecCCCCeeeccc-cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 031257 18 KDARGHEVDLST-YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (163)
Q Consensus 18 ~~~~G~~~~l~~-~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (163)
..++++.+...- -++++++|.||++||++|+...+.+.++.+++++ ++.++.++++. ..+ .++ +
T Consensus 4 ~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~--------~~~---~~~-~-- 68 (106)
T 2yj7_A 4 IEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE--------NPN---TAA-Q-- 68 (106)
Confidence 344444443222 2568999999999999999999999999998875 38888887641 110 110 1
Q ss_pred CccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhcC
Q 031257 97 SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVIL 163 (163)
Q Consensus 97 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (163)
| |+ .++| +++++ ++|+++.++.|..+.+++.+.|
T Consensus 69 -------------------~--------~v--~~~P---t~~~~-~~g~~~~~~~g~~~~~~l~~~l 102 (106)
T 2yj7_A 69 -------------------Y--------GI--RSIP---TLLLF-KNGQVVDRLVGAQPKEALKERI 102 (106)
Confidence 0 11 4556 88888 7999999888888777776543
No 183
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.30 E-value=2.8e-12 Score=83.90 Aligned_cols=84 Identities=25% Similarity=0.305 Sum_probs=59.6
Q ss_pred CCcEEEEEeccCCCC--------------CChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 031257 31 KGKVLLIVNVASKCG--------------MTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~--------------~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (163)
+|+++||.||++||+ +|+...|.+.++.++++++ +.++.|++|. ..
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~-------~~------------ 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP------------ 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS-------CT------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH------------
Confidence 578999999999999 9999999999999988764 9999998752 10
Q ss_pred CccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 97 SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 97 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.... .| |+ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 80 -------------~l~~-~~--------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 117 (123)
T 1oaz_A 80 -------------GTAP-KY--------GI--RGIP---TLLLF-KNGEVAATKVGALSKGQLKEF 117 (123)
T ss_dssp -------------TTGG-GG--------TC--CBSS---EEEEE-ESSSEEEEEESCCCHHHHHHH
T ss_pred -------------HHHH-Hc--------CC--CccC---EEEEE-ECCEEEEEEeCCCCHHHHHHH
Confidence 0000 01 22 5566 99989 899999999998887777654
No 184
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.29 E-value=1.2e-12 Score=88.48 Aligned_cols=43 Identities=12% Similarity=-0.109 Sum_probs=39.5
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.+++|||.|||+||++|+...|.|.++.++++++ +.|+-|++|
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVD 82 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDIT 82 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECC
Confidence 3579999999999999999999999999999765 889999986
No 185
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.28 E-value=7.2e-12 Score=83.47 Aligned_cols=85 Identities=12% Similarity=0.107 Sum_probs=64.6
Q ss_pred CCcEEEEEeccCC--CCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 31 KGKVLLIVNVASK--CGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 31 ~gk~vlv~f~~s~--C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
.++++||+|||+| |++|+...|.|.++.++|.++.+.++-|++| +-.+.+. ++
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD-----------e~~~lA~-~y------------- 87 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE-----------QSEAIGD-RF------------- 87 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH-----------HHHHHHH-HH-------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC-----------CCHHHHH-Hc-------------
Confidence 4568999999999 9999999999999999997644899998764 2222222 21
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .+|| |++++ ++|+++.+..|..+.+++.+.
T Consensus 88 ----------------gV--~sIP---TlilF-k~G~~v~~~~G~~~k~~l~~~ 119 (140)
T 2qgv_A 88 ----------------GA--FRFP---ATLVF-TGGNYRGVLNGIHPWAELINL 119 (140)
T ss_dssp ----------------TC--CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred ----------------CC--ccCC---EEEEE-ECCEEEEEEecCCCHHHHHHH
Confidence 33 6777 76666 899999999998887766553
No 186
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.28 E-value=1.2e-12 Score=84.28 Aligned_cols=85 Identities=18% Similarity=0.238 Sum_probs=61.7
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC--CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~--~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
++++++|.||++||++|+...+.+.++.+++++. ++.++.++++. ..
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~~------------------------ 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------ES------------------------ 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------CC------------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------CH------------------------
Confidence 5789999999999999999999999999998764 47777777541 00
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEE--EEeCCCCCcchhhhc
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV--DRYYPTTSLLSLEVI 162 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~--~~~~g~~~~~~~~~~ 162 (163)
.... .| ++ .++| +++++ ++|+++ .++.|..+.+++.+.
T Consensus 72 -~~~~-~~--------~v--~~~P---t~~~~-~~g~~~~~~~~~g~~~~~~l~~~ 111 (120)
T 1mek_A 72 -DLAQ-QY--------GV--RGYP---TIKFF-RNGDTASPKEYTAGREADDIVNW 111 (120)
T ss_dssp -SSHH-HH--------TC--CSSS---EEEEE-ESSCSSSCEECCCCSSHHHHHHH
T ss_pred -HHHH-HC--------CC--Cccc---EEEEE-eCCCcCCcccccCccCHHHHHHH
Confidence 0000 11 22 5566 88888 688876 778887777776654
No 187
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.27 E-value=3.5e-12 Score=91.99 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=47.2
Q ss_pred EecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCC--eEEEEEecC
Q 031257 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQG--LEILAFPCN 74 (163)
Q Consensus 17 l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~--~~ii~is~d 74 (163)
+..++++.+.....+|++++|.||++||++|+...|.+.++.+++++.+ +.++.|+++
T Consensus 17 v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~ 76 (241)
T 3idv_A 17 VLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDAT 76 (241)
T ss_dssp EEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETT
T ss_pred cEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEecc
Confidence 3444555555444478999999999999999999999999999998765 888888875
No 188
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.25 E-value=1.6e-12 Score=84.40 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=39.4
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++++||.||++||++|+...|.+.++.+++++ ++.++.|+++
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~ 62 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQ 62 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCc
Confidence 468999999999999999999999999999986 4999999875
No 189
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.25 E-value=1.1e-12 Score=90.81 Aligned_cols=95 Identities=6% Similarity=0.001 Sum_probs=59.3
Q ss_pred EEecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHH---HHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHH
Q 031257 16 SVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIE---LSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVC 92 (163)
Q Consensus 16 ~l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~---l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~ 92 (163)
.+.....+.+..+..+||+|||+||++||++|+...+. ..++.+.+++ ++.++.|+.+ ..++-...|..
T Consensus 23 ~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~d-------e~~~l~~~y~~ 94 (173)
T 3ira_A 23 DWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDRE-------ERPDIDNIYMT 94 (173)
T ss_dssp CCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETT-------TCHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCc-------ccCcHHHHHHH
Confidence 33344445555566679999999999999999997762 2344444443 3777777764 22222222211
Q ss_pred hhcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEE
Q 031257 93 TRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDR 149 (163)
Q Consensus 93 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~ 149 (163)
. ...+ .|+ .++| ++++++++|++++.
T Consensus 95 -~---------------------~q~~----~gv--~g~P---t~v~l~~dG~~v~~ 120 (173)
T 3ira_A 95 -V---------------------CQII----LGR--GGWP---LNIIMTPGKKPFFA 120 (173)
T ss_dssp -H---------------------HHHH----HSC--CCSS---EEEEECTTSCEEEE
T ss_pred -H---------------------HHHH----cCC--CCCc---ceeeECCCCCceee
Confidence 0 0000 133 6677 99999999999986
No 190
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.23 E-value=5.7e-11 Score=71.96 Aligned_cols=41 Identities=12% Similarity=0.144 Sum_probs=37.1
Q ss_pred cEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 33 k~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++++.||++||++|+...+.+.++.+++++ ++.++.++++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~ 43 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVM 43 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECC
Confidence 4789999999999999999999999999875 4999999875
No 191
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.22 E-value=1.5e-12 Score=88.31 Aligned_cols=76 Identities=11% Similarity=0.055 Sum_probs=51.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHH--HHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLY--DKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~--~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
.||+|||+|||+||++|+...|.+.+.. .++.+ ..++.|.+|. +..+ . ...
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~------e~~~-~----~~~-------------- 95 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMH------ETTD-K----NLS-------------- 95 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESS------CCSC-G----GGC--------------
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecC------Cchh-h----Hhh--------------
Confidence 5899999999999999999998887632 12222 2355565541 0000 0 000
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCC
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
.++ .++| +++++|++|+++.+..|.
T Consensus 96 ---------------~~v--~~~P---T~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 96 ---------------PDG--QYVP---RIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp ---------------TTC--CCSS---EEEEECTTSCBCTTCCCS
T ss_pred ---------------cCC--CCCC---EEEEECCCCCEEEEEeCC
Confidence 011 5667 999999999999998887
No 192
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.20 E-value=1.4e-11 Score=74.78 Aligned_cols=40 Identities=10% Similarity=0.136 Sum_probs=35.8
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++++.||++||++|+...|.+.++.+++++ ++.++.++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~ 42 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIM 42 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTT
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 468999999999999999999999999985 4899999875
No 193
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.20 E-value=3e-11 Score=78.53 Aligned_cols=41 Identities=20% Similarity=0.072 Sum_probs=37.2
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++++||.||++||++|+...|.|.++.+++++ +.++-|++|
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d 63 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVN 63 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhH
Confidence 34999999999999999999999999999864 899999875
No 194
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.19 E-value=2.8e-12 Score=84.06 Aligned_cols=42 Identities=26% Similarity=0.321 Sum_probs=38.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++++++|.||++||++|+...+.|.++.++++ ++.++.|+++
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~ 76 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVD 76 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTT
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEecc
Confidence 58899999999999999999999999999986 4888998875
No 195
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.17 E-value=2.4e-11 Score=97.27 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=70.8
Q ss_pred EecCCCCeeecccc-CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC--CCeEEEEEecCCCCCCCCCCHHHHHHHHHh
Q 031257 17 VKDARGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSNDQIADFVCT 93 (163)
Q Consensus 17 l~~~~G~~~~l~~~-~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~--~~~~ii~is~d~~~~~~~~~~~~~~~~~~~ 93 (163)
+..++++.+...-. .++++||.|||+||++|+.+.|.+.++++++++ .++.++.|+++. +.. .+.+.
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~------d~~---~~l~~- 83 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE------ETN---SAVCR- 83 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS------GGG---HHHHH-
T ss_pred cEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc------ccc---HHHHH-
Confidence 33344444433222 358999999999999999999999999999987 259999999851 111 12222
Q ss_pred hcCCccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECC---CCcEEEEeCCCCCcchhhhc
Q 031257 94 RFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDK---NGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 94 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~---~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ |+ .++| +++++++ +|+.+....|..+.+.+.+.
T Consensus 84 ~~-----------------------------~V--~~~P---Tl~~f~~g~~~G~~~~~~~g~~~~~~L~~~ 121 (519)
T 3t58_A 84 EF-----------------------------NI--AGFP---TVRFFQAFTKNGSGATLPGAGANVQTLRMR 121 (519)
T ss_dssp HT-----------------------------TC--CSBS---EEEEECTTCCSCCCEEECCSSCCHHHHHHH
T ss_pred Hc-----------------------------CC--cccC---EEEEEcCcccCCCceeEecCCCCHHHHHHH
Confidence 21 22 5666 9999987 77777777777777766553
No 196
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.16 E-value=9.3e-11 Score=75.03 Aligned_cols=87 Identities=11% Similarity=0.274 Sum_probs=62.6
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCCc
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEH 111 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 111 (163)
+++++|+|+++||++|+...|.+.++.++ . ++.++-|.++ ...++.+.+.+++++.
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdVd--------e~r~~Sn~IA~~~~V~------------- 79 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIVQ--------QERDLSDYIAKKTNVK------------- 79 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEGG--------GGHHHHHHHHHHHTCC-------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEee--------cCchhhHHHHHHhCCc-------------
Confidence 78999999999999999999999999885 2 4888888875 3444433333332221
Q ss_pred chhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEE-eCCCCCcchhhhcC
Q 031257 112 ASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDR-YYPTTSLLSLEVIL 163 (163)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~-~~g~~~~~~~~~~l 163 (163)
...| +.+|+ ++|+++++ ..+..+.+.+.+.|
T Consensus 80 -----------------h~sP---q~il~-k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 80 -----------------HESP---QAFYF-VNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp -----------------CCSS---EEEEE-ETTEEEEEEEGGGCSHHHHHHHT
T ss_pred -----------------cCCC---eEEEE-ECCEEEEEeeccccCHHHHHHhh
Confidence 1355 77777 79999988 55666777776653
No 197
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.16 E-value=8e-11 Score=84.21 Aligned_cols=84 Identities=7% Similarity=-0.014 Sum_probs=61.6
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcC---CCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKD---QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~---~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
+++++|.||++||++|+...|.+.++.+++++ .++.++.|+++. . .+ ... ++
T Consensus 134 ~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-------~-~~---l~~-~~------------- 188 (226)
T 1a8l_A 134 QDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-------Y-PE---WAD-QY------------- 188 (226)
T ss_dssp SCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-------C-HH---HHH-HT-------------
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-------C-HH---HHH-hC-------------
Confidence 34559999999999999999999999999973 259999998751 1 11 111 11
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+.+.++.|..+.+++.+.
T Consensus 189 ----------------~v--~~~P---t~~~~-~~G~~~~~~~G~~~~~~l~~~ 220 (226)
T 1a8l_A 189 ----------------NV--MAVP---KIVIQ-VNGEDRVEFEGAYPEKMFLEK 220 (226)
T ss_dssp ----------------TC--CSSC---EEEEE-ETTEEEEEEESCCCHHHHHHH
T ss_pred ----------------CC--cccC---eEEEE-eCCceeEEEcCCCCHHHHHHH
Confidence 22 5667 76555 699999999998887777654
No 198
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.15 E-value=5e-11 Score=79.94 Aligned_cols=82 Identities=11% Similarity=0.140 Sum_probs=53.2
Q ss_pred CcEEEEEeccCC--CCCChhhHHHHHHHHHHhcCCCeE--EEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeec
Q 031257 32 GKVLLIVNVASK--CGMTNSNYIELSQLYDKYKDQGLE--ILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (163)
Q Consensus 32 gk~vlv~f~~s~--C~~C~~~~~~l~~~~~~~~~~~~~--ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 107 (163)
++.+||+||++| |++|+...|.|.++.+++ + ++. ++.|++| +-.+.+. ++
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d-----------~~~~la~-~~------------ 87 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLE-----------QSEAIGD-RF------------ 87 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHH-----------HHHHHHH-TT------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECC-----------CCHHHHH-hc------------
Confidence 346788899877 999999999999999998 4 377 8898764 1111111 11
Q ss_pred CCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +++++ ++|+++.++.|..+.+++.+.
T Consensus 88 -----------------~V--~~iP---T~~~f-k~G~~v~~~~G~~~~~~l~~~ 119 (142)
T 2es7_A 88 -----------------NV--RRFP---ATLVF-TDGKLRGALSGIHPWAELLTL 119 (142)
T ss_dssp -----------------TC--CSSS---EEEEE-SCC----CEESCCCHHHHHHH
T ss_pred -----------------CC--CcCC---eEEEE-eCCEEEEEEeCCCCHHHHHHH
Confidence 22 5667 99999 899999999998887776653
No 199
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.13 E-value=7.1e-11 Score=85.72 Aligned_cols=44 Identities=20% Similarity=0.213 Sum_probs=40.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC--CCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD--QGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~--~~~~ii~is~d 74 (163)
.++++||.||++||++|+...|.+.++++++++ .++.++.|+++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 74 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCA 74 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCC
Confidence 358999999999999999999999999999987 36999999985
No 200
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.09 E-value=7.7e-10 Score=65.74 Aligned_cols=37 Identities=8% Similarity=-0.014 Sum_probs=31.7
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEe
Q 031257 35 LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP 72 (163)
Q Consensus 35 vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is 72 (163)
..|.||++||++|+...+.+.++.+++... +.++.|+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~ 38 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGID-AEFEKIK 38 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCC-EEEEEEC
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCc-eEEEEec
Confidence 358999999999999999999999998753 7777773
No 201
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.09 E-value=3.5e-10 Score=82.32 Aligned_cols=41 Identities=10% Similarity=0.009 Sum_probs=37.7
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
++++|||.||++||++|+...|.|.+++++|++ +.|+.|++
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~ 172 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKA 172 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEH
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeC
Confidence 378999999999999999999999999999874 89999975
No 202
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.08 E-value=6.8e-11 Score=93.62 Aligned_cols=85 Identities=15% Similarity=0.216 Sum_probs=63.7
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC-CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~-~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
.++++||.||++||++|+...|.+.++.+++++. ++.++.|+++. . + ....|
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~-------~--~--------~~~~~---------- 421 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-------N--D--------VPSPY---------- 421 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS-------S--C--------CCTTC----------
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc-------h--h--------hHhhC----------
Confidence 4799999999999999999999999999999875 68888888641 0 0 00000
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcE-EEEeCCCCCcchhhhc
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQV-VDRYYPTTSLLSLEVI 162 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i-~~~~~g~~~~~~~~~~ 162 (163)
++ .++| ++++++++|++ ..++.|..+.+++.+.
T Consensus 422 ---------------~v--~~~P---t~~~~~~~~~~~~~~~~G~~~~~~l~~~ 455 (481)
T 3f8u_A 422 ---------------EV--RGFP---TIYFSPANKKLNPKKYEGGRELSDFISY 455 (481)
T ss_dssp ---------------CC--CSSS---EEEEECTTCTTSCEECCSCCSHHHHHHH
T ss_pred ---------------CC--cccC---EEEEEeCCCeEeeeEeCCCCCHHHHHHH
Confidence 22 5666 99999888874 5567887777776553
No 203
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.08 E-value=2e-10 Score=85.99 Aligned_cols=43 Identities=14% Similarity=0.234 Sum_probs=39.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++++||.||++||++|+...|.+.++.+++++. +.++.|++|
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d 76 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCD 76 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEcc
Confidence 4689999999999999999999999999999875 899999986
No 204
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.07 E-value=1.3e-12 Score=83.44 Aligned_cols=40 Identities=13% Similarity=0.037 Sum_probs=34.5
Q ss_pred CeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhc
Q 031257 23 HEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYK 62 (163)
Q Consensus 23 ~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~ 62 (163)
+.+++++..++++||.||++||++|+...|.+.++.++++
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 4566778888999999999999999999999999886653
No 205
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.07 E-value=3.6e-10 Score=82.21 Aligned_cols=46 Identities=11% Similarity=0.040 Sum_probs=39.4
Q ss_pred ccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhc--C-CCeEEEEEecC
Q 031257 29 TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYK--D-QGLEILAFPCN 74 (163)
Q Consensus 29 ~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~--~-~~~~ii~is~d 74 (163)
+++++++++.||++||++|+...|.+.++..+++ + .++.+..|+++
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~ 183 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY 183 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc
Confidence 3567889999999999999999999999999984 1 45888888874
No 206
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.05 E-value=2.6e-10 Score=81.67 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=36.9
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
+|+++||.||++||++|+...|.|.++.++|. ++.++.|++
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~ 159 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRA 159 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEH
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEEC
Confidence 35899999999999999999999999999985 489999874
No 207
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.04 E-value=1.2e-10 Score=75.95 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=40.4
Q ss_pred cccCCcEEEEEeccC-------CCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 28 STYKGKVLLIVNVAS-------KCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 28 ~~~~gk~vlv~f~~s-------~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.+.++++++|.||++ ||++|+...|.|.++.+++++ ++.++.|+++
T Consensus 20 ~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 20 EQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp HTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred HHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 334589999999999 999999999999999998875 5999999874
No 208
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.02 E-value=7.8e-10 Score=84.31 Aligned_cols=43 Identities=12% Similarity=0.093 Sum_probs=38.3
Q ss_pred CCcEEEEEeccCCCCCChhhHHH-------HHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIE-------LSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~-------l~~~~~~~~~~~~~ii~is~d 74 (163)
+++++||.|||+||+ |+...|. +.++.+++++.++.++.|+++
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~ 76 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAK 76 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETT
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCC
Confidence 468999999999999 9888888 889999988767999999986
No 209
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.01 E-value=3.4e-10 Score=81.48 Aligned_cols=84 Identities=12% Similarity=0.204 Sum_probs=61.8
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC--CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~--~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
.+++++|.||++||++|+...|.+.++.++++++ ++.++.|+++ ...+ .+. ++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~--------~~~~---l~~-~~------------- 200 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT--------AETD---LAK-RF------------- 200 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETT--------TCHH---HHH-HT-------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECC--------CCHH---HHH-Hc-------------
Confidence 4689999999999999999999999999999765 3888888875 1122 111 21
Q ss_pred CCcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| ++++++ +|+.+. +.|..+.+.+.+.
T Consensus 201 ----------------~v--~~~P---t~~~~~-~g~~~~-~~g~~~~~~l~~~ 231 (241)
T 3idv_A 201 ----------------DV--SGYP---TLKIFR-KGRPYD-YNGPREKYGIVDY 231 (241)
T ss_dssp ----------------TC--CSSS---EEEEEE-TTEEEE-CCSCCSHHHHHHH
T ss_pred ----------------CC--cccC---EEEEEE-CCeEEE-ecCCCCHHHHHHH
Confidence 22 4566 877776 588776 7787777776653
No 210
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.99 E-value=8.7e-11 Score=75.89 Aligned_cols=87 Identities=8% Similarity=-0.025 Sum_probs=54.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhc-CCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYK-DQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~-~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
+...+||+||+.||++|+..-+.+...++... .+.+.++-|+++. ..+. .....|
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~------~~~~--------~la~~~---------- 72 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD------PLPP--------GLELAR---------- 72 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS------CCCT--------TCBCSS----------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC------CCch--------hHHHHC----------
Confidence 45689999999999999988765443322110 0125677777651 0000 000000
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| |+++++ +|+.+.+..|..+++.+.+.
T Consensus 73 ---------------~V--~g~P---T~i~f~-~G~ev~Ri~G~~~~~~f~~~ 104 (116)
T 3dml_A 73 ---------------PV--TFTP---TFVLMA-GDVESGRLEGYPGEDFFWPM 104 (116)
T ss_dssp ---------------CC--CSSS---EEEEEE-TTEEEEEEECCCCHHHHHHH
T ss_pred ---------------CC--CCCC---EEEEEE-CCEEEeeecCCCCHHHHHHH
Confidence 12 4556 999998 99999999999988777654
No 211
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.99 E-value=7.4e-10 Score=84.57 Aligned_cols=84 Identities=15% Similarity=0.186 Sum_probs=63.3
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC-CeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~-~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (163)
.+++++|.||++||++|+...|.+.++.++++++ ++.++.|+++. .. +. + |
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~-------~~------~~-~----~---------- 317 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA-------NE------VE-A----V---------- 317 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT-------CB------CS-S----C----------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc-------cc------hh-h----c----------
Confidence 5789999999999999999999999999999875 58888887641 00 00 1 1
Q ss_pred CcchhHHHHhHhCCCcccCCccccCeeEEEECCC-CcEEEEeCCCCCcchhhhc
Q 031257 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKN-GQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~-G~i~~~~~g~~~~~~~~~~ 162 (163)
++ .++| ++++++++ |+...++.|..+.+.+.+.
T Consensus 318 ---------------~v--~~~P---t~~~~~~~~~~~~~~~~G~~~~~~l~~~ 351 (361)
T 3uem_A 318 ---------------KV--HSFP---TLKFFPASADRTVIDYNGERTLDGFKKF 351 (361)
T ss_dssp ---------------CC--CSSS---EEEEECSSSSCCCEECCSCSSHHHHHHH
T ss_pred ---------------CC--cccC---eEEEEECCCCcceeEecCCCCHHHHHHH
Confidence 22 5666 99999655 6777778888887777654
No 212
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.98 E-value=3.2e-10 Score=87.48 Aligned_cols=57 Identities=14% Similarity=0.161 Sum_probs=43.9
Q ss_pred ecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcC-----CCeEEEEEecC
Q 031257 18 KDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-----QGLEILAFPCN 74 (163)
Q Consensus 18 ~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~-----~~~~ii~is~d 74 (163)
..++++.+...--+++++||.||++||++|+...|.+.++++++++ .++.++.|+++
T Consensus 8 ~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~ 69 (382)
T 2r2j_A 8 TSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD 69 (382)
T ss_dssp CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT
T ss_pred EECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC
Confidence 3444544432112578999999999999999999999999999853 24899999875
No 213
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.95 E-value=8.6e-10 Score=87.86 Aligned_cols=44 Identities=14% Similarity=0.261 Sum_probs=41.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++++++|.||++||++|+...|.+.++.+++++.++.++.|+++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~ 73 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCT 73 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETT
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECC
Confidence 47899999999999999999999999999998777999999985
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.92 E-value=1.1e-09 Score=86.63 Aligned_cols=82 Identities=13% Similarity=0.252 Sum_probs=62.8
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeeeeecCCCc
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEH 111 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 111 (163)
++++||.||++||++|+...|.+.++++++++. +.++.|+++ .... .++ ++
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~--------~~~~---l~~-~~---------------- 71 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCT--------ANTN---TCN-KY---------------- 71 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETT--------TCHH---HHH-HT----------------
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECC--------CCHH---HHH-hc----------------
Confidence 489999999999999999999999999999887 889999885 1111 122 21
Q ss_pred chhHHHHhHhCCCcccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhh
Q 031257 112 ASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEV 161 (163)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (163)
|+ .++| +++++ ++|+++.++.|..+.+.+.+
T Consensus 72 -------------~v--~~~P---tl~~~-~~g~~~~~~~G~~~~~~l~~ 102 (481)
T 3f8u_A 72 -------------GV--SGYP---TLKIF-RDGEEAGAYDGPRTADGIVS 102 (481)
T ss_dssp -------------TC--CEES---EEEEE-ETTEEEEECCSCSSHHHHHH
T ss_pred -------------CC--CCCC---EEEEE-eCCceeeeecCccCHHHHHH
Confidence 22 4566 76666 68988888888887776654
No 215
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.90 E-value=1.8e-09 Score=90.21 Aligned_cols=46 Identities=15% Similarity=0.099 Sum_probs=41.2
Q ss_pred cccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 28 STYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 28 ~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.+++|++++|.||++||++|+..+|.+.+++++++++ +.++.|+++
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~ 496 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCT 496 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCC
Confidence 3347899999999999999999999999999999864 999999875
No 216
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.89 E-value=7.7e-10 Score=88.13 Aligned_cols=43 Identities=21% Similarity=0.253 Sum_probs=37.5
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhc-C-CCeEEEEEec
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYK-D-QGLEILAFPC 73 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~-~-~~~~ii~is~ 73 (163)
.++++||.||++||++|+...|.+.++.++++ . .++.++.+++
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~ 419 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDH 419 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEG
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecC
Confidence 47899999999999999999999999999987 2 2577888765
No 217
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.87 E-value=1.2e-09 Score=86.10 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=39.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC-------CeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-------GLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~-------~~~ii~is~d 74 (163)
+++++||.|||+||++|+.+.|.+.++.+++++. .+.++.|+++
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d 91 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA 91 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC
Confidence 3479999999999999999999999999999743 2899999986
No 218
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.86 E-value=3.6e-09 Score=75.80 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=35.8
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++++++.||++||++|+...|.+.++..++. ++.++.|+++
T Consensus 136 ~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~ 176 (229)
T 2ywm_A 136 IPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDAS 176 (229)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGG
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 4456889999999999999999999999983 5999999875
No 219
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.85 E-value=1e-08 Score=69.44 Aligned_cols=82 Identities=12% Similarity=0.091 Sum_probs=53.7
Q ss_pred CCcEEEEEeccCCCCCChhhH------HHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccceeee
Q 031257 31 KGKVLLIVNVASKCGMTNSNY------IELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEK 104 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~------~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (163)
.+|+++|+|+++||..|+..- +.+.++.++ ++.++.++.+ + .+-.++.+ +++
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~----~fv~v~~d~~--------~-~~~~~l~~-~y~-------- 98 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE----HFIFWQVYHD--------S-EEGQRYIQ-FYK-------- 98 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH----TEEEEEEESS--------S-HHHHHHHH-HHT--------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc----CeEEEEEecC--------C-HhHHHHHH-HcC--------
Confidence 489999999999999998874 444444432 3777777653 2 22233332 211
Q ss_pred eecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCC-CcEEEEeCCCCCcchhhh
Q 031257 105 IDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKN-GQVVDRYYPTTSLLSLEV 161 (163)
Q Consensus 105 ~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~-G~i~~~~~g~~~~~~~~~ 161 (163)
+ .++| +++++|++ |+.+.+..| .+++++.+
T Consensus 99 ---------------------v--~~~P---~~~fld~~~G~~l~~~~g-~~~~~fl~ 129 (153)
T 2dlx_A 99 ---------------------L--GDFP---YVSILDPRTGQKLVEWHQ-LDVSSFLD 129 (153)
T ss_dssp ---------------------C--CSSS---EEEEECTTTCCCCEEESS-CCHHHHHH
T ss_pred ---------------------C--CCCC---EEEEEeCCCCcEeeecCC-CCHHHHHH
Confidence 1 4556 99999998 877776666 67766654
No 220
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.78 E-value=3.9e-09 Score=72.60 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=41.7
Q ss_pred CCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 21 RGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 21 ~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
++....+.+-.++++|+.||..|||+|....+.|.++.+++.+ +.++...+
T Consensus 11 ~~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~ 61 (175)
T 3gyk_A 11 DPNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREW 61 (175)
T ss_dssp CTTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEEC
T ss_pred CCCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeC
Confidence 4445667777889999999999999999999999999998765 56655554
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.75 E-value=2.2e-09 Score=89.62 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=39.2
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++++||.||++||++|+...|.+.++.++++++ +.++.|+++
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~-~~~~~vd~~ 716 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK-VRAGKVDCQ 716 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-ceEEEEECC
Confidence 4689999999999999999999999999999764 999999875
No 222
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.68 E-value=3.1e-08 Score=70.68 Aligned_cols=43 Identities=12% Similarity=0.194 Sum_probs=34.8
Q ss_pred ccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 27 LSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 27 l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
+...+++++|+.||++|||+|+...+.|.++.+. ++.++.+..
T Consensus 81 ~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~ 123 (216)
T 1eej_A 81 YKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAF 123 (216)
T ss_dssp ECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred ecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 3344678999999999999999999999988652 578877765
No 223
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.66 E-value=2.7e-08 Score=69.58 Aligned_cols=43 Identities=12% Similarity=0.112 Sum_probs=38.7
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++++|+.||..|||+|....+.+.++.+++.+ ++.+..+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 578999999999999999999999999999887 4888888875
No 224
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.66 E-value=1e-07 Score=73.21 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=36.2
Q ss_pred CCcEEEEEeccCCCCCChhhH------HHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNY------IELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~------~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+++++||.|||+||++|...- |.+.++.+.+++.++.++.|+++
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~ 78 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSE 78 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETT
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCc
Confidence 468999999999999974332 57888888888767999999985
No 225
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.64 E-value=6.1e-09 Score=66.77 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=27.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
+++++++ ||++||++|+...+.|.++..+ +.++.|+.
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~ 54 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDE 54 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGG
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccC
Confidence 4566666 9999999999999988887432 55666654
No 226
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.64 E-value=1.1e-07 Score=66.45 Aligned_cols=131 Identities=9% Similarity=0.002 Sum_probs=83.2
Q ss_pred cccCCCcccc--eE--EecCC---------C--Ceeecccc--CCcEEEEEec-cCCCCCChh-hHHHHHHHHHHh-cCC
Q 031257 5 FIQNPESIFD--LS--VKDAR---------G--HEVDLSTY--KGKVLLIVNV-ASKCGMTNS-NYIELSQLYDKY-KDQ 64 (163)
Q Consensus 5 ~~~~~~~~p~--f~--l~~~~---------G--~~~~l~~~--~gk~vlv~f~-~s~C~~C~~-~~~~l~~~~~~~-~~~ 64 (163)
...+++++|. ++ ....+ | .++++++. +||.|||++. +.+.|.|.. ++|.+.+.+.++ +.+
T Consensus 25 ~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~k 104 (199)
T 4h86_A 25 SDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEK 104 (199)
T ss_dssp CTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHS
T ss_pred HHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhc
Confidence 4557888885 33 22221 2 25667664 6887766655 899999987 699999888765 667
Q ss_pred Ce-EEEEEecCCCCCCCCCCHHHHHHHHHhhcCC----ccceeeeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEE
Q 031257 65 GL-EILAFPCNQFGEEEPGSNDQIADFVCTRFKS----EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFL 139 (163)
Q Consensus 65 ~~-~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~l 139 (163)
|+ .|+.|++| ++-.+++|.+ ..+. .++++ .|.+++.+..+ ........ .+....=..+|
T Consensus 105 Gvd~I~ciSVN--------D~FVm~AW~k-~~~~~~~~~i~~l--aD~~~eftkal-Gl~~~~~~----gg~RS~Rya~I 168 (199)
T 4h86_A 105 EVDQVIVVTVD--------NPFANQAWAK-SLGVKDTTHIKFA--SDPGCAFTKSI-GFELAVGD----GVYWSGRWAMV 168 (199)
T ss_dssp CCCEEEEEESS--------CHHHHHHHHH-HTTCCCCSSEEEE--ECGGGHHHHHT-TCEEEEET----TEEEECSEEEE
T ss_pred CCcEEEEEEcC--------CHHHHHHHHH-Hhccccccccccc--CCcchHHHHhc-CceeecCC----CcceeeEEEEE
Confidence 76 68899986 6888888886 4443 46777 78777665422 22111111 11111114688
Q ss_pred ECCCCcEEEEeCC
Q 031257 140 VDKNGQVVDRYYP 152 (163)
Q Consensus 140 id~~G~i~~~~~g 152 (163)
|| ||+|.+.+..
T Consensus 169 Vd-DGvV~~~~vE 180 (199)
T 4h86_A 169 VE-NGIVTYAAKE 180 (199)
T ss_dssp EE-TTEEEEEEEC
T ss_pred EE-CCEEEEEEEe
Confidence 88 8999987553
No 227
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.57 E-value=2.4e-07 Score=64.15 Aligned_cols=43 Identities=9% Similarity=0.090 Sum_probs=37.4
Q ss_pred CCcEEEEEecc-------CCCCCChhhHHHHHHHHHHhc-----CCCeEEEEEecC
Q 031257 31 KGKVLLIVNVA-------SKCGMTNSNYIELSQLYDKYK-----DQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~-------s~C~~C~~~~~~l~~~~~~~~-----~~~~~ii~is~d 74 (163)
++.++||.||| .||++|+...|.+.++.+++. ++ +.+.-|++|
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~-v~f~kvD~d 90 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSL-NLFFTVDVN 90 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCC-EEEEEEETT
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCC-EEEEEEECc
Confidence 35689999999 499999999999999999997 43 888888875
No 228
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.52 E-value=5e-08 Score=68.07 Aligned_cols=43 Identities=12% Similarity=0.141 Sum_probs=37.9
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++++|+.||..|||+|....+.|.++.+++.+ ++.+.-+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEehh
Confidence 578999999999999999999999999999887 4888777653
No 229
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.51 E-value=1.5e-07 Score=61.95 Aligned_cols=42 Identities=7% Similarity=0.049 Sum_probs=37.4
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.+.+++|.||++ |.+|+...|.|.+++++|+++ +.++.+++|
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d 63 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAK 63 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTT
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchH
Confidence 357899999999 899999999999999999876 899999865
No 230
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.42 E-value=9e-07 Score=62.92 Aligned_cols=44 Identities=20% Similarity=0.186 Sum_probs=36.2
Q ss_pred ccCCcEEEEEeccC-CCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 29 TYKGKVLLIVNVAS-KCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 29 ~~~gk~vlv~f~~s-~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
..+++++|+.||++ ||++|+...+.+.++.+. .+ ++.++.|+++
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~ 63 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFD 63 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETT
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCC
Confidence 34567889999999 999999999999998854 33 4999999874
No 231
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.40 E-value=2.6e-07 Score=64.47 Aligned_cols=42 Identities=12% Similarity=-0.020 Sum_probs=37.0
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
.++++|+.||..|||+|....+.|.++.++++. .+.+..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 578999999999999999999999999999876 478877765
No 232
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.37 E-value=2.2e-07 Score=56.82 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=25.4
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
|+.||++||++|+...+.|.++..++ +.-|++|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid 35 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFID 35 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECT
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECC
Confidence 78899999999999988887765332 4567765
No 233
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.37 E-value=6.4e-07 Score=64.89 Aligned_cols=45 Identities=9% Similarity=0.117 Sum_probs=35.1
Q ss_pred ccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 27 LSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 27 l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+..-.++++|+.|+..|||+|+...+.+.++.++ + ++.+..+.+.
T Consensus 92 ~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p 136 (241)
T 1v58_A 92 DGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVG 136 (241)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECC
T ss_pred ECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECC
Confidence 3333568899999999999999999999887764 2 4777766653
No 234
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.35 E-value=5.2e-07 Score=57.29 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=32.7
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
..|+.||++||++|....+.|.++..++ ++.+.-|+++
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId 67 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINID 67 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECC
Confidence 5799999999999999999999998775 3777778775
No 235
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.33 E-value=1.3e-06 Score=69.92 Aligned_cols=42 Identities=10% Similarity=0.003 Sum_probs=36.4
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++..++.||++||++|+...|.+.++..+++ ++.+..++.+
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~ 157 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGG 157 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETT
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEech
Confidence 35678999999999999999999999988876 4888888864
No 236
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.31 E-value=1.5e-06 Score=61.98 Aligned_cols=45 Identities=9% Similarity=0.108 Sum_probs=34.4
Q ss_pred cCCcEEEEEe----ccCCCCCChhhHHHHHHHHHHhcC-CCeEEEEEecC
Q 031257 30 YKGKVLLIVN----VASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCN 74 (163)
Q Consensus 30 ~~gk~vlv~f----~~s~C~~C~~~~~~l~~~~~~~~~-~~~~ii~is~d 74 (163)
.++.++|+.| |++||++|+..+|.+.++++++.+ ..+.+..|+++
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~ 68 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF 68 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc
Confidence 3445566666 588899999999999999888832 24899898874
No 237
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.29 E-value=4.8e-06 Score=56.97 Aligned_cols=49 Identities=12% Similarity=0.184 Sum_probs=40.9
Q ss_pred eeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHh--cCCCeEEEEEecC
Q 031257 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKY--KDQGLEILAFPCN 74 (163)
Q Consensus 25 ~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~--~~~~~~ii~is~d 74 (163)
+.+....++++|+.|+..+||+|....+.+.++.+++ .+ ++.++.....
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeCC
Confidence 5566667899999999999999999999999999888 44 3888877664
No 238
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.23 E-value=7.5e-07 Score=63.22 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=31.3
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
.++++|+.||..|||+|+...+.|.++.+. ++.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~ 123 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAF 123 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 467999999999999999999999886542 477766544
No 239
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.18 E-value=1.3e-06 Score=60.62 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=36.6
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
.++++|+.||..+||+|....+.+.++.+++.. .+.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 578899999999999999999999999998876 478777765
No 240
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.09 E-value=2.2e-06 Score=51.12 Aligned_cols=37 Identities=8% Similarity=-0.004 Sum_probs=28.0
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 35 LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 35 vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++.||++|||+|+...+.+.++.+++ ++.+..+.+|
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~ 39 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLG 39 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETT
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 367889999999999999998886543 4555555554
No 241
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.08 E-value=1.6e-06 Score=52.05 Aligned_cols=37 Identities=8% Similarity=-0.003 Sum_probs=31.6
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++.|+++|||+|....+.|.++..+++ ++.+..++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecc
Confidence 678999999999999999999988765 4888888764
No 242
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.04 E-value=7.2e-06 Score=59.37 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=34.0
Q ss_pred CCcEEEEEecc--CCCCCChhhHHHHHHHHHHhcC-CCeEEEEEecC
Q 031257 31 KGKVLLIVNVA--SKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~--s~C~~C~~~~~~l~~~~~~~~~-~~~~ii~is~d 74 (163)
.++++||.||+ +||+ ..|.+.++.+++.+ .++.|..|+++
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd 63 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGIS 63 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCC
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 35799999999 9998 88999999999874 35999999864
No 243
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.95 E-value=1.9e-05 Score=57.46 Aligned_cols=40 Identities=5% Similarity=-0.066 Sum_probs=34.2
Q ss_pred CCcEEEEEec--cCCCCCChhhHHHHHHHHHHhcC--CCeEEEEEecC
Q 031257 31 KGKVLLIVNV--ASKCGMTNSNYIELSQLYDKYKD--QGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~--~s~C~~C~~~~~~l~~~~~~~~~--~~~~ii~is~d 74 (163)
+++++||.|| |+||+ ..|.+.++.+++.+ ..+.|..|+++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d 75 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVK 75 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECC
Confidence 4579999999 99998 88999999999864 35999999986
No 244
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.88 E-value=2.8e-06 Score=63.11 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=29.3
Q ss_pred eeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHh
Q 031257 24 EVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKY 61 (163)
Q Consensus 24 ~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~ 61 (163)
.+.+++.-++..++.||++|||+|+...|.+.++.+++
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34455544455689999999999999999999887554
No 245
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.82 E-value=2.5e-06 Score=59.96 Aligned_cols=53 Identities=15% Similarity=0.211 Sum_probs=42.1
Q ss_pred CCCee-eccc-cCCcEEEEEeccCCCCCChhhHHHH---HHHHHHhcCCCeEEEEEecC
Q 031257 21 RGHEV-DLST-YKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 21 ~G~~~-~l~~-~~gk~vlv~f~~s~C~~C~~~~~~l---~~~~~~~~~~~~~ii~is~d 74 (163)
.|+.+ .+.. ..++++||.||+.|||+|....|.+ .++.+++++ ++.+.-+.++
T Consensus 100 ~g~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 100 DGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp BTTTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 45533 2332 3568999999999999999999998 899988876 4888888875
No 246
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.77 E-value=1.8e-05 Score=55.19 Aligned_cols=43 Identities=19% Similarity=0.109 Sum_probs=38.2
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++++|+.||..|||+|....+.+.++.+++.+ .+.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 468999999999999999999999999999887 4888888765
No 247
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.72 E-value=7.5e-05 Score=56.70 Aligned_cols=41 Identities=5% Similarity=0.176 Sum_probs=36.8
Q ss_pred cEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 33 k~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+.++|.|++.||+.|....+.+.+++++++++ +.++.++++
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~ 176 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSD 176 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTT
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCC
Confidence 47789999999999999999999999999886 888888764
No 248
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.63 E-value=1.7e-05 Score=49.50 Aligned_cols=49 Identities=12% Similarity=0.153 Sum_probs=34.4
Q ss_pred CCCeeecccc-CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 21 RGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 21 ~G~~~~l~~~-~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+|..-.|... ...+.|+.|+++||++|+...+.|.++. .++.+.-++++
T Consensus 3 ~~~~~~l~~~~~~~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 3 SGSSGNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCCCCCCCSCCCCCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CCcchhhhhccCCCCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 3444444443 3457889999999999998888776543 23788888874
No 249
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.50 E-value=0.00024 Score=51.23 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=34.4
Q ss_pred CcEEEEEeccCC--CCCChhhHHHHHHHHHHhcC-CC---eEEEEEecC
Q 031257 32 GKVLLIVNVASK--CGMTNSNYIELSQLYDKYKD-QG---LEILAFPCN 74 (163)
Q Consensus 32 gk~vlv~f~~s~--C~~C~~~~~~l~~~~~~~~~-~~---~~ii~is~d 74 (163)
+++++|.||+.| |++|+...+.+.++.+.+.. +| +.++.++.+
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d 73 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE 73 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC
Confidence 468999999999 99999999999999987532 11 777777764
No 250
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.47 E-value=0.00015 Score=42.78 Aligned_cols=32 Identities=6% Similarity=0.272 Sum_probs=24.7
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++.|+++|||+|+...+.|.+ .++.+..++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECC
Confidence 577999999999988777764 24667777765
No 251
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.45 E-value=0.00092 Score=44.57 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=30.9
Q ss_pred ccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 27 LSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 27 l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
+..-.++.+|+.|...+||+|+...+.+.++ . ++.++.+..
T Consensus 9 ~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~~ 49 (147)
T 3gv1_A 9 EVRGNGKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFMM 49 (147)
T ss_dssp EEETTCCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEEC
T ss_pred eecCCCCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEEc
Confidence 3333578999999999999999999988654 2 366666544
No 252
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.29 E-value=4.9e-05 Score=52.80 Aligned_cols=43 Identities=5% Similarity=0.060 Sum_probs=35.9
Q ss_pred CCcEEEEEeccCCCCCChhhHHHH---HHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l---~~~~~~~~~~~~~ii~is~d 74 (163)
.++++||.||..|||+|....+.+ .++.+++.+ ++.++-+.++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 457899999999999999999987 577777765 4888888875
No 253
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.23 E-value=0.00019 Score=44.59 Aligned_cols=26 Identities=27% Similarity=0.252 Sum_probs=20.3
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHH
Q 031257 35 LLIVNVASKCGMTNSNYIELSQLYDK 60 (163)
Q Consensus 35 vlv~f~~s~C~~C~~~~~~l~~~~~~ 60 (163)
.++.|+++|||+|+...+.|.++..+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~ 38 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFK 38 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBC
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCC
Confidence 36679999999999988888765433
No 254
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.14 E-value=0.0011 Score=42.02 Aligned_cols=34 Identities=9% Similarity=0.058 Sum_probs=24.1
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeE---EEEEecC
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLE---ILAFPCN 74 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~---ii~is~d 74 (163)
..|+.|+++|||+|+...+.|.+ .++. +..++++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~-------~~~~~~~~~~vdi~ 55 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNK-------FSFKRGAYEIVDIK 55 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTT-------SCBCTTSEEEEEGG
T ss_pred CCEEEEEeCCChhHHHHHHHHHH-------cCCCcCceEEEEcc
Confidence 45777999999999887776643 3444 6666664
No 255
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.06 E-value=0.00062 Score=39.29 Aligned_cols=32 Identities=13% Similarity=0.192 Sum_probs=24.2
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++.|+++||++|+...+.|.++ ++.+..++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECC
Confidence 5678999999999888777653 4666667664
No 256
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.99 E-value=0.00016 Score=50.06 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=34.1
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++++||.|+..|||+|....|.+.++.+++ + +.+.-+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--CeEEEEecc
Confidence 689999999999999999999999999988 3 666666553
No 257
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.98 E-value=0.00076 Score=41.91 Aligned_cols=24 Identities=21% Similarity=0.140 Sum_probs=19.4
Q ss_pred EEEEEeccCCCCCChhhHHHHHHH
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQL 57 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~ 57 (163)
..++.|+++|||+|+...+.|.++
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc
Confidence 446679999999999988777664
No 258
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.74 E-value=0.016 Score=39.78 Aligned_cols=102 Identities=14% Similarity=0.155 Sum_probs=59.5
Q ss_pred ccCCcEEEEEeccCCCCCChhhH------HHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCcccee
Q 031257 29 TYKGKVLLIVNVASKCGMTNSNY------IELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 102 (163)
Q Consensus 29 ~~~gk~vlv~f~~s~C~~C~~~~------~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (163)
.-.+|+++|++..+||+.|...- +.+.++.++ ++.+.+.+++ +.+....++. .....+
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~----nfV~w~~dv~--------~~e~~~~~~~-~~~~~~--- 115 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ----NFITWAWDLT--------KDSNRARFLT-MCNRHF--- 115 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH----TEEEEEEECC--------SHHHHHHHHH-HHHHHT---
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc----CEEEEEEeCC--------Cchhhhhhhh-hhhhhh---
Confidence 44679999999999999866543 445555543 4788888764 3443333221 100000
Q ss_pred eeeecCCCcchhHHHHhHhCCCcccCCccccCeeEEEECCCC---cEEEEeCCCCCcchhhhc
Q 031257 103 EKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNG---QVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 103 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~lid~~G---~i~~~~~g~~~~~~~~~~ 162 (163)
+.. +...... .+. .++| ...+|+++| +++.+..|..+++++.+.
T Consensus 116 ------g~~---~a~~~~~--~~~--~~~P---~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~ 162 (178)
T 2ec4_A 116 ------GSV---VAQTIRT--QKT--DQFP---LFLIIMGKRSSNEVLNVIQGNTTVDELMMR 162 (178)
T ss_dssp ------CHH---HHHHHHH--SCS--TTCS---EEEEECCCSSCCCEEEEECSCCCHHHHHHH
T ss_pred ------HHH---HHHHHhh--cCC--CCCC---eEEEEEcCCCceEEEEEEeCCCCHHHHHHH
Confidence 000 0000000 011 4566 999998764 789999999998877653
No 259
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.68 E-value=0.0038 Score=40.48 Aligned_cols=32 Identities=3% Similarity=0.132 Sum_probs=22.5
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++.|+++|||+|+...+.|.++. +.+..+.+|
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~-------i~~~~vdid 60 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMN-------VNYKVVELD 60 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHT-------CCCEEEETT
T ss_pred EEEEEcCCChHHHHHHHHHHHcC-------CCcEEEECc
Confidence 33499999999999888777652 344455554
No 260
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.68 E-value=0.0022 Score=40.94 Aligned_cols=35 Identities=14% Similarity=0.235 Sum_probs=21.9
Q ss_pred EEEeccCCCCCChhh-HHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSN-YIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~-~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
|+.|+.+|||+|+.. .+.|.+ .....+.+..++++
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~----~~~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEK----LKVPRSKVLVLQLN 62 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTT----SCCCGGGEEEEEGG
T ss_pred EEEEEcCCCcCHHHHHHHHHHH----cCCCCCCeEEEECc
Confidence 566999999999987 443322 21111666667665
No 261
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.62 E-value=0.01 Score=35.44 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=23.1
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 35 LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 35 vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
.++.|+++|||+|+...+.|.+. ++.+..+++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv 38 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK-------GVKYTDIDA 38 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH-------TCCEEEECS
T ss_pred eEEEEECCCChhHHHHHHHHHHc-------CCCcEEEEC
Confidence 36678999999999887777654 355555654
No 262
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.58 E-value=0.0036 Score=36.61 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=22.8
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++.|+.+|||+|+...+.|.+. ++.+..++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~ 34 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPID 34 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECC
Confidence 5668899999999887777653 3555556654
No 263
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.57 E-value=0.0042 Score=38.37 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=25.7
Q ss_pred cEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 33 k~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+.-|+.|+.+|||+|.....-|.++ ++.+..++++
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~ 49 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCID 49 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcC
Confidence 4567779999999999888777654 3555556664
No 264
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=96.46 E-value=0.00094 Score=46.39 Aligned_cols=44 Identities=9% Similarity=0.083 Sum_probs=36.8
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHH---HHHHHHhcCCCeEEEEEecC
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l---~~~~~~~~~~~~~ii~is~d 74 (163)
..++++|+.|+.-+||+|....+.+ .++.+++.+. +.++-+..+
T Consensus 19 ~~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~ 65 (191)
T 3l9s_A 19 VAGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVE 65 (191)
T ss_dssp CCSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECS
T ss_pred CCCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEecc
Confidence 3568999999999999999999987 6898888764 777777765
No 265
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.33 E-value=0.0048 Score=40.95 Aligned_cols=22 Identities=5% Similarity=0.208 Sum_probs=17.9
Q ss_pred EEEeccCCCCCChhhHHHHHHH
Q 031257 36 LIVNVASKCGMTNSNYIELSQL 57 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~ 57 (163)
|+.|+++|||+|+...+.|.++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 3449999999999988877765
No 266
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.32 E-value=0.0056 Score=36.79 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=23.2
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++.|+.+||++|+...+.|.+. ++.+..++++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~ 39 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK-------GAEFNEIDAS 39 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEST
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 6678899999999877666543 4556666664
No 267
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.31 E-value=0.0075 Score=37.42 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=23.1
Q ss_pred cEEEEEecc-----CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 33 KVLLIVNVA-----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 33 k~vlv~f~~-----s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
..++| |+. +|||+|+...+.|.++ ++.+..++++
T Consensus 17 ~~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~ 55 (105)
T 2yan_A 17 ASVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 55 (105)
T ss_dssp SSEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred CCEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECC
Confidence 34555 555 9999999877777654 3556666664
No 268
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=96.28 E-value=0.0043 Score=42.56 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=36.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHH-HHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIEL-SQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l-~~~~~~~~~~~~~ii~is~d 74 (163)
.+++++|.||...||+|....+.+ .++.+++... +.+..+.++
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~-v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI-VAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-CEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc-eEEEEEecC
Confidence 467788899999999999999999 9999888754 777777765
No 269
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.18 E-value=0.0053 Score=38.56 Aligned_cols=22 Identities=9% Similarity=0.229 Sum_probs=17.5
Q ss_pred EEEeccCCCCCChhhHHHHHHH
Q 031257 36 LIVNVASKCGMTNSNYIELSQL 57 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~ 57 (163)
|+.|+.+|||+|....+-|.++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 6669999999999877666553
No 270
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.94 E-value=0.039 Score=33.56 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=22.5
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
|+.|..+|||+|...-.-|. ++|+.+--++++
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~-------~~gi~y~~idi~ 37 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALT-------ANRIAYDEVDIE 37 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHH-------HTTCCCEEEETT
T ss_pred EEEEcCCCCHhHHHHHHHHH-------hcCCceEEEEcC
Confidence 56678899999977554443 345777777765
No 271
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=95.86 E-value=0.0074 Score=40.83 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=39.0
Q ss_pred CCCee-ecccc-CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 21 RGHEV-DLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 21 ~G~~~-~l~~~-~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
+|+.+ .+..- .++++||.|+.-.||+|....+.+.++.+++.+. +.++-+..
T Consensus 8 eG~~Y~vl~~p~~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~~ 61 (184)
T 4dvc_A 8 EGEHYQVLKTPASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNHV 61 (184)
T ss_dssp BTTTEEECSSCCCSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEEC
T ss_pred CCCCcEECCCCCCCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEec
Confidence 45533 23333 4688999999999999999999999999998775 55655544
No 272
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.81 E-value=0.031 Score=34.81 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=23.5
Q ss_pred cEEEEEecc----CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 33 KVLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 33 k~vlv~f~~----s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
..++|++.+ +|||+|......|.++ ++.+..++++
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~ 53 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 53 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESS
T ss_pred CCEEEEEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECC
Confidence 345555554 8999998877666543 4667777765
No 273
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=95.78 E-value=0.054 Score=38.21 Aligned_cols=40 Identities=5% Similarity=0.110 Sum_probs=33.2
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
..++.|...||+.|....+.+++++++++++ +.++.+..+
T Consensus 133 ~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~ 172 (227)
T 4f9z_D 133 IHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSG 172 (227)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETT
T ss_pred eEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCc
Confidence 4455666789999999999999999999987 888888753
No 274
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.59 E-value=0.0051 Score=39.93 Aligned_cols=19 Identities=11% Similarity=0.235 Sum_probs=14.9
Q ss_pred EEEeccCCCCCChhh-HHHH
Q 031257 36 LIVNVASKCGMTNSN-YIEL 54 (163)
Q Consensus 36 lv~f~~s~C~~C~~~-~~~l 54 (163)
|+.|+.+|||+|... .+.|
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L 58 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLF 58 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHH
T ss_pred EEEEECCCCCchHHHHHHHH
Confidence 677899999999877 4444
No 275
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=95.49 E-value=0.021 Score=35.98 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=21.2
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++.|+.+|||+|....+.|.++ |+.+-.+.+|
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd 50 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL-------GVECNVLELD 50 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEec
Confidence 4448899999998777666553 3444455554
No 276
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=95.40 E-value=0.19 Score=32.46 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=34.0
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccc
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFP 100 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (163)
+..|..++|+.|+....-|.+ .|+.+-.++++ ....+.+++++++. ..+.++.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~----~~~~~~~el~~~l~-~~~~~~~ 55 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIF----SEPLSIDEIKQILR-MTEDGTD 55 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHHH-TCSSCGG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEcc----CCCccHHHHHHHHH-HcCCCHH
Confidence 455678999999887766654 34555556654 12345678888876 5555443
No 277
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.11 E-value=0.014 Score=34.48 Aligned_cols=22 Identities=5% Similarity=-0.035 Sum_probs=17.0
Q ss_pred EEEEeccCCCCCChhhHHHHHH
Q 031257 35 LLIVNVASKCGMTNSNYIELSQ 56 (163)
Q Consensus 35 vlv~f~~s~C~~C~~~~~~l~~ 56 (163)
.++.|+.+|||+|+.....|.+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEEcCCChhHHHHHHHHHH
Confidence 3677889999999887666644
No 278
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=95.07 E-value=0.012 Score=43.15 Aligned_cols=39 Identities=8% Similarity=0.197 Sum_probs=31.3
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEe
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP 72 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is 72 (163)
.|+.+|+.|+...||+|++..+.+.+..+. -.+.++.+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~---~~Vr~i~~P 184 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE---NTVRMVVVG 184 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH---CEEEEEECC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC---CcEEEEEee
Confidence 467999999999999999999999976654 236666654
No 279
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=94.71 E-value=0.058 Score=37.54 Aligned_cols=53 Identities=13% Similarity=0.204 Sum_probs=38.9
Q ss_pred CCCeeeccccCCcEEEEEeccCCCCCChhhHHHH-HHHHHHhcCC-CeEEEEEecC
Q 031257 21 RGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIEL-SQLYDKYKDQ-GLEILAFPCN 74 (163)
Q Consensus 21 ~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l-~~~~~~~~~~-~~~ii~is~d 74 (163)
.|.++ +..-.++++|+.|+.-.||+|....+.+ ..+.++|.+. .+.++...+.
T Consensus 19 ~~~~~-~G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 19 KGQPV-LGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp TTSCE-ESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCce-ecCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 44433 4444678999999999999999988887 5666677542 4888887764
No 280
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=94.63 E-value=0.023 Score=39.01 Aligned_cols=43 Identities=16% Similarity=0.295 Sum_probs=34.9
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHh-cCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKY-KDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~-~~~~~~ii~is~d 74 (163)
.++++|+.|..-.||+|....+.+.++.+++ .+ .++++.-...
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g-~v~~v~r~~p 56 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGED-NVTVRIRLQS 56 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTT-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-CEEEEEEEcC
Confidence 4678899999999999999999998888776 43 3888877654
No 281
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.30 E-value=0.16 Score=31.71 Aligned_cols=36 Identities=14% Similarity=0.227 Sum_probs=21.9
Q ss_pred EEEeccCCCCCChh--hHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTNS--NYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~~--~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
|+.|..++||+|.. ......++.+ ++++.+..++++
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~---~~gi~y~~vdI~ 47 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLE---ANKIEFEEVDIT 47 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH---HTTCCEEEEETT
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHH---HcCCCEEEEECC
Confidence 55677899999983 1222333333 345777777765
No 282
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.20 E-value=0.012 Score=35.29 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=17.9
Q ss_pred EEEeccCCCCCChhhHHHHHHH
Q 031257 36 LIVNVASKCGMTNSNYIELSQL 57 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~ 57 (163)
++.|+.+|||+|+.....|.++
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 5668899999999887777664
No 283
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=94.15 E-value=0.12 Score=36.03 Aligned_cols=49 Identities=16% Similarity=-0.006 Sum_probs=37.3
Q ss_pred eeccccCCcEEEEEeccCCCCCChhhHHHHHHHHH-HhcCC-CeEEEEEec
Q 031257 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYD-KYKDQ-GLEILAFPC 73 (163)
Q Consensus 25 ~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~-~~~~~-~~~ii~is~ 73 (163)
..+.+-.++++|+.|..-.||+|+...+.+....+ +|-+. .++++....
T Consensus 8 ~~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 8 HLLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred ceecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 33555567899999999999999999988876665 77332 488887765
No 284
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=94.06 E-value=0.32 Score=30.82 Aligned_cols=52 Identities=10% Similarity=0.130 Sum_probs=34.2
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCcc
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEF 99 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (163)
+..|..++|+.|+....-|.+ +|+.+-.+++. ....+.+++++++. ..+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~el~~~l~-~~~~~~ 53 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIM----TSPLSRDELLKILS-YTENGT 53 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHHH-HCSSTH
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecc----cCCCcHHHHHHHHh-hcCCCH
Confidence 345567999999887766643 45566566553 22457888888886 555554
No 285
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=93.94 E-value=0.04 Score=35.61 Aligned_cols=58 Identities=14% Similarity=0.302 Sum_probs=33.5
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhh-cCCcccee
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR-FKSEFPIF 102 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 102 (163)
|+.|..+|||+|...-.-|.+.. .+ .-.+.++-|..+ .+.+++++++.+. ....+|.+
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~-~~-~v~~~~idid~~-------~d~~~~~~~l~~~~G~~tVP~I 74 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEY-QF-IPNYYIIELDKH-------GHGEELQEYIKLVTGRGTVPNL 74 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHE-EE-ESCCEEEEGGGS-------TTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEEcCCCccHHHHHHHHHHhc-cc-CCCcEEEEecCC-------CCHHHHHHHHHHHcCCCCcceE
Confidence 66777899999988776665531 01 112455555432 2445666666533 23466765
No 286
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=93.85 E-value=0.067 Score=36.35 Aligned_cols=44 Identities=23% Similarity=0.272 Sum_probs=34.1
Q ss_pred CCcEEEEEeccCCCCCChhhHHHH-HHHHHHhcCC-CeEEEEEecC
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIEL-SQLYDKYKDQ-GLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l-~~~~~~~~~~-~~~ii~is~d 74 (163)
.++++|+.|+...||+|....+.+ .++.++|.+. ++.++...+.
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p 55 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLA 55 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecC
Confidence 467889999999999999999998 4677788643 3777776653
No 287
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=93.68 E-value=0.28 Score=29.33 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=20.1
Q ss_pred EEEeccCCCCCCh--hhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVASKCGMTN--SNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s~C~~C~--~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
|+.|..++||.|. ..-....++.+ ++|+.+-.++++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~---~~~i~~~~~di~ 41 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD---GKRIQYQLVDIS 41 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH---HTTCCCEEEETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH---HCCCceEEEECC
Confidence 4567789999993 11112223332 345666667664
No 288
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=93.55 E-value=0.4 Score=30.51 Aligned_cols=50 Identities=14% Similarity=0.275 Sum_probs=34.0
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS 97 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (163)
+..|..++|+.|++...-| +++|+.+-.+++. ....+.+++.+++. ..+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~----~~~~~~~eL~~~l~-~~g~ 56 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALV-------EQQGITPQVVLYL----ETPPSVDKLKELLQ-QLGF 56 (121)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HTTTCCCEEECTT----TSCCCHHHHHHHHH-HTTC
T ss_pred EEEEECCCCHHHHHHHHHH-------HHcCCCcEEEeec----cCCCcHHHHHHHHH-hcCC
Confidence 4456689999998877655 3455666566553 23467888999987 6665
No 289
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=93.16 E-value=0.12 Score=36.67 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=38.0
Q ss_pred eeccccCCcEEEEEeccCCCCCChhhHHHH-HHHHHHhcCC-CeEEEEEecC
Q 031257 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIEL-SQLYDKYKDQ-GLEILAFPCN 74 (163)
Q Consensus 25 ~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l-~~~~~~~~~~-~~~ii~is~d 74 (163)
..+..-.++++|+.|+.-.||+|....+.+ .++.++|.+. .+.++...+.
T Consensus 32 ~~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 32 KLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp CEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 345555678999999999999999998865 6788788432 4888777664
No 290
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.11 E-value=0.12 Score=33.75 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=22.3
Q ss_pred EEEEEecc----CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 34 VLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 34 ~vlv~f~~----s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++|+.++ +|||+|......|.+ .++.+..++++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~-------~gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAA-------CGERFAYVDIL 73 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHT-------TCSCCEEEEGG
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHH-------cCCceEEEECC
Confidence 45665555 899999876655533 35666666664
No 291
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=92.52 E-value=0.25 Score=29.11 Aligned_cols=32 Identities=16% Similarity=0.063 Sum_probs=20.4
Q ss_pred EEEeccC----CCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 36 LIVNVAS----KCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 36 lv~f~~s----~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
++.|..+ +||+|.....-|++ +|+.+-.++++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------cCCCEEEEEee
Confidence 4556788 99999876655544 34555555553
No 292
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=91.75 E-value=0.17 Score=31.69 Aligned_cols=37 Identities=11% Similarity=0.270 Sum_probs=22.3
Q ss_pred CCcEEEEEecc----CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~----s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+..+|+|+.-+ +|||+|.....-|.+ .|+.+..++++
T Consensus 14 ~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~-------~gi~y~~~di~ 54 (111)
T 3zyw_A 14 HAAPCMLFMKGTPQEPRCGFSKQMVEILHK-------HNIQFSSFDIF 54 (111)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred hcCCEEEEEecCCCCCcchhHHHHHHHHHH-------cCCCeEEEECc
Confidence 33445554431 899999887766643 34555556654
No 293
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=90.91 E-value=0.87 Score=28.80 Aligned_cols=26 Identities=15% Similarity=0.303 Sum_probs=17.4
Q ss_pred CcEEEEEecc----CCCCCChhhHHHHHHH
Q 031257 32 GKVLLIVNVA----SKCGMTNSNYIELSQL 57 (163)
Q Consensus 32 gk~vlv~f~~----s~C~~C~~~~~~l~~~ 57 (163)
...|+|+--. +|||+|.....-|.+.
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHc
Confidence 3445555555 4999998887666554
No 294
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=90.57 E-value=0.54 Score=30.76 Aligned_cols=50 Identities=14% Similarity=0.224 Sum_probs=32.5
Q ss_pred EEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCc
Q 031257 37 IVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE 98 (163)
Q Consensus 37 v~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (163)
..|..++|+.|++...-|.+ +|+.+-.+++. ....+.+++.+++. ..+.+
T Consensus 5 tiY~~p~C~~crkak~~L~~-------~gi~~~~idi~----~~~~~~~eL~~~~~-~~g~p 54 (141)
T 1s3c_A 5 TIYHNPASGTSRNTLEMIRN-------SGTEPTIILYL----ENPPSRDELVKLIA-DMGIS 54 (141)
T ss_dssp EEECCTTCHHHHHHHHHHHH-------TTCCCEEECTT----TSCCCHHHHHHHHH-HHTSC
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCCEEEEECC----CCCccHHHHHHHhc-ccCCC
Confidence 35567999999887766543 45666566653 12356788888876 55553
No 295
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=88.94 E-value=0.53 Score=29.76 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=20.6
Q ss_pred cEEEEEecc----CCCCCChhhHHHHHHHHHHhcCCCeE-EEEEecC
Q 031257 33 KVLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLE-ILAFPCN 74 (163)
Q Consensus 33 k~vlv~f~~----s~C~~C~~~~~~l~~~~~~~~~~~~~-ii~is~d 74 (163)
..|+|+--. +|||+|.....-|.+. ++. +-.++++
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~vdV~ 59 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVL 59 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCCEEEESS
T ss_pred CCEEEEEecCCCCCccHHHHHHHHHHHHc-------CCCCCEEEEcC
Confidence 345554444 3999998766555442 352 5555554
No 296
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=88.88 E-value=1.8 Score=27.54 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=22.7
Q ss_pred EEEEeccCCCCCCh--hhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 35 LLIVNVASKCGMTN--SNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 35 vlv~f~~s~C~~C~--~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+|+.|..+.||+|. +.-....++. ..+|+.+--++++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL---~~kgV~feEidI~ 39 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFL---EANKIGFEEKDIA 39 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHH---HHTTCCEEEEECT
T ss_pred CEEEEecCCCCCccchHHHHHHHHHH---HHCCCceEEEECC
Confidence 35566689999994 2223333443 4456778777774
No 297
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=88.64 E-value=0.68 Score=28.61 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=22.0
Q ss_pred CCcEEEEEecc----CCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 31 KGKVLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 31 ~gk~vlv~f~~----s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+...++|+--. +|||+|.....-|.+. |+.+-.++++
T Consensus 16 ~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~-------gi~~~~~dI~ 56 (109)
T 3ipz_A 16 NSEKVVLFMKGTRDFPMCGFSNTVVQILKNL-------NVPFEDVNIL 56 (109)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred ccCCEEEEEecCCCCCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 33455554444 3999998876666543 4555555553
No 298
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=88.61 E-value=0.32 Score=30.83 Aligned_cols=51 Identities=14% Similarity=0.234 Sum_probs=32.4
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCc
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE 98 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (163)
+..|..++|+.|++...-|.+ +|+.+-.+++. ....+.+++..++. ..+.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~t~~eL~~~l~-~~g~~ 56 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-------QGIAPQVIKYL----ETSPSVEELKRLYQ-QLGLN 56 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECHH----HHCCCHHHHHHHHH-HHTCS
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEEec----cCcCcHHHHHHHHH-HcCCc
Confidence 344557899999988866653 34444444332 11357888999987 66654
No 299
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=88.33 E-value=2 Score=27.08 Aligned_cols=55 Identities=7% Similarity=0.039 Sum_probs=35.7
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCcccee
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 102 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (163)
+..|..++|+.|++...-|.+ +|+.+-.+++. ....+.+++.+++. ..+.++.-+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l~-~~g~~~~~l 60 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIV----DDNPTVEELKAWIP-LSGLPVKKF 60 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT----TTCCCHHHHHHHHH-HHTSCGGGG
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEecc----cCcCCHHHHHHHHH-HcCCCHHHe
Confidence 345568999999888766643 34555555543 22467888999987 667654443
No 300
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=86.64 E-value=0.97 Score=28.60 Aligned_cols=55 Identities=18% Similarity=0.225 Sum_probs=36.1
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCcccee
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 102 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (163)
+..|..++|+.|++...-|.+ +|+.+-.+++. ....+.+++.+++. ..+.++.-+
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l~-~~g~~~~~l 59 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIK----KNPPAASLIRNWLE-NSGLELKKF 59 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEETT----TSCCCHHHHHHHHH-HSCCCGGGG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEec----cCchhHHHHHHHHH-HcCCCHHHH
Confidence 345567999999988766643 34555555543 22467889999987 677654444
No 301
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=85.72 E-value=1.5 Score=33.07 Aligned_cols=42 Identities=10% Similarity=0.007 Sum_probs=34.3
Q ss_pred cEEEEEeccCCCCCChhhHHHHHHHHHHhcCC-CeEEEEEecC
Q 031257 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCN 74 (163)
Q Consensus 33 k~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~-~~~ii~is~d 74 (163)
+..++.|...+|+.|...++.|++++++++++ .+.++.++.+
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~ 290 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPD 290 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGG
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCc
Confidence 35566688888888889999999999999985 4888888764
No 302
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=83.32 E-value=3.5 Score=26.10 Aligned_cols=35 Identities=11% Similarity=-0.069 Sum_probs=26.8
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEE
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAF 71 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~i 71 (163)
.+++||-|+.+||..| .+.+.++++.+ +. +.+...
T Consensus 39 ~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d-~~F~~t 73 (124)
T 2l4c_A 39 TEVAVIGFFQDLEIPA---VPILHSMVQKF-PG-VSFGIS 73 (124)
T ss_dssp SSEEEEEECSCTTSTH---HHHHHHHHHHC-TT-SEEEEE
T ss_pred CCCEEEEEECCCCChh---HHHHHHHHHhC-CC-ceEEEE
Confidence 5799999999999998 56677778777 33 666444
No 303
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=83.12 E-value=0.78 Score=28.66 Aligned_cols=49 Identities=4% Similarity=0.043 Sum_probs=30.5
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (163)
+..|..++|+.|++...-|.+ +|+.+-.+++. ....+.+++++++. +.+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~----~~~~~~~~l~~~~~-~~g 50 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYK----AVGIDREHLRRWCA-EHG 50 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHH----HHCCCHHHHHHHHH-HHC
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeec----CCCCCHHHHHHHHH-hCC
Confidence 345668999999887766644 34555555542 11235678888876 444
No 304
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=82.64 E-value=11 Score=27.38 Aligned_cols=38 Identities=11% Similarity=0.130 Sum_probs=28.0
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
..|..|...+||+|...-.-|.++..++ ++..+.+.++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVD 81 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEE
Confidence 5677777899999999988888887653 3545566654
No 305
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=81.03 E-value=0.15 Score=23.74 Aligned_cols=21 Identities=10% Similarity=0.085 Sum_probs=17.1
Q ss_pred CCCCChhhHHHHHHHHHHhcC
Q 031257 43 KCGMTNSNYIELSQLYDKYKD 63 (163)
Q Consensus 43 ~C~~C~~~~~~l~~~~~~~~~ 63 (163)
-||.|+.++|.++.+..-|.+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 499999999999888776643
No 306
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=80.17 E-value=6.1 Score=29.34 Aligned_cols=41 Identities=12% Similarity=-0.014 Sum_probs=32.2
Q ss_pred cEEEEEeccCCCCCChhhHHHHHHHHHHhcC-CCeEEEEEec
Q 031257 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPC 73 (163)
Q Consensus 33 k~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~-~~~~ii~is~ 73 (163)
+..++.|...+|+.|...++.++++.+++++ ..+.++.++.
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~ 287 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDP 287 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECG
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECc
Confidence 3345557788998899999999999999984 3588888865
No 307
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=78.36 E-value=1 Score=34.29 Aligned_cols=16 Identities=13% Similarity=0.378 Sum_probs=10.6
Q ss_pred EEEeccCCCCCChhhH
Q 031257 36 LIVNVASKCGMTNSNY 51 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~ 51 (163)
|+.|..+|||+|....
T Consensus 263 VvVYsk~~CPyC~~Ak 278 (362)
T 2jad_A 263 IFVASKTYCPYSHAAL 278 (362)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEEcCCCcchHHHH
Confidence 4445668888887654
No 308
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=75.60 E-value=3.3 Score=26.15 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=27.1
Q ss_pred cEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 33 k~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
|.+||-|--+.|+.|......|.++ .++ +.++-|++
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~l----ede-Y~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEEL----KSE-YDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTT----TTT-EEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHh----hcc-ccEEEEEe
Confidence 5689999999999998877777444 443 67777764
No 309
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=75.41 E-value=3 Score=26.13 Aligned_cols=49 Identities=12% Similarity=0.196 Sum_probs=30.6
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcC
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (163)
+..|..++|+.|++...-|.+. |+.+-.+.+.. ...+.+++++++. +.+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~----~~~~~~~l~~~~~-~~g 55 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-------GIDYTFHDYKK----EGLDAETLDRFLK-TVP 55 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEEHHH----HCCCHHHHHHHHH-HSC
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCcEEEEeeeC----CCCCHHHHHHHHH-HcC
Confidence 4456679999999887766552 34444444420 1235678888876 555
No 310
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=74.95 E-value=2.9 Score=28.60 Aligned_cols=38 Identities=11% Similarity=0.035 Sum_probs=26.6
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEe
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP 72 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is 72 (163)
..|..|+..-||+|-...+.+.++.+ +.+.++.+.-..
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred eeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 45667778899999987788888777 433346665444
No 311
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=73.25 E-value=4.2 Score=27.80 Aligned_cols=37 Identities=8% Similarity=-0.003 Sum_probs=29.4
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEe
Q 031257 35 LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP 72 (163)
Q Consensus 35 vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is 72 (163)
.|..|+..-||+|-...+.|.++.+++.+ ++.|.-..
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLPG-VIQFEYVV 40 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSCT-TSEEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCCC-CceEEEEe
Confidence 56677788999999999999999999864 36665554
No 312
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=69.54 E-value=1.9 Score=30.29 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=22.7
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
..++.|..+|||+|......|.+. ++.+-.+.++
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~ 203 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHDK-------GLSFEEIILG 203 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHH-------TCCCEEEETT
T ss_pred ceEEEEECCCChHHHHHHHHHHHc-------CCceEEEECC
Confidence 446777889999999876666543 3444455554
No 313
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=67.23 E-value=17 Score=25.31 Aligned_cols=22 Identities=23% Similarity=0.252 Sum_probs=17.4
Q ss_pred CccccCeeEEEECCCCcEEEEeCCC
Q 031257 129 DDIQWNFAKFLVDKNGQVVDRYYPT 153 (163)
Q Consensus 129 ~~ip~~~~~~lid~~G~i~~~~~g~ 153 (163)
.++| +.++++++|++.......
T Consensus 204 ~~~P---slvl~~~~g~~~~~~~~~ 225 (244)
T 3q6o_A 204 TDFP---SCYLLFRNGSVSRVPVLM 225 (244)
T ss_dssp CCSS---EEEEEETTSCEEECCCSS
T ss_pred CCCC---eEEEEeCCCCeEeecccc
Confidence 5667 999999999998765443
No 314
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=66.63 E-value=3.5 Score=18.25 Aligned_cols=15 Identities=13% Similarity=0.297 Sum_probs=12.8
Q ss_pred eEEEECCCCcEEEEe
Q 031257 136 AKFLVDKNGQVVDRY 150 (163)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (163)
++.|+|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 478999999999865
No 315
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=64.75 E-value=11 Score=23.76 Aligned_cols=56 Identities=14% Similarity=0.214 Sum_probs=35.2
Q ss_pred cCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCcccee
Q 031257 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 102 (163)
Q Consensus 30 ~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (163)
|+|.++||++-.-. -.. .+..+.+.+...|+.++||... ..+.+++.+. .. .+|++
T Consensus 45 F~~aPVVlDl~~l~---~~~---dl~~L~~~l~~~gl~~vGV~g~--------~~~~~~~~a~-~~--GLp~l 100 (120)
T 3ghf_A 45 LKHAPVVINVSGLE---SPV---NWPELHKIVTSTGLRIIGVSGC--------KDASLKVEID-RM--GLPLL 100 (120)
T ss_dssp HTTCEEEEEEEECC---SSC---CHHHHHHHHHTTTCEEEEEESC--------CCHHHHHHHH-HH--TCCEE
T ss_pred hCCCcEEEEccccC---ChH---HHHHHHHHHHHcCCEEEEEeCC--------CcHHHHHHHH-HC--CCCcc
Confidence 47889999997543 112 3555556666778999999842 3344566554 43 44555
No 316
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=63.26 E-value=9.5 Score=23.98 Aligned_cols=23 Identities=17% Similarity=0.355 Sum_probs=13.9
Q ss_pred CcEEEEEecc----CCCCCChhhHHHH
Q 031257 32 GKVLLIVNVA----SKCGMTNSNYIEL 54 (163)
Q Consensus 32 gk~vlv~f~~----s~C~~C~~~~~~l 54 (163)
..+|+|+.=+ +.||+|.....-|
T Consensus 19 ~~~VvvF~Kgt~~~P~C~fc~~ak~lL 45 (118)
T 2wul_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQIL 45 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHH
T ss_pred cCCEEEEEcCCCCCCCCHHHHHHHHHH
Confidence 3456666544 4688887665444
No 317
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=61.08 E-value=1 Score=21.85 Aligned_cols=18 Identities=17% Similarity=0.407 Sum_probs=12.7
Q ss_pred CCCChhhHHHHHHHHHHh
Q 031257 44 CGMTNSNYIELSQLYDKY 61 (163)
Q Consensus 44 C~~C~~~~~~l~~~~~~~ 61 (163)
||.|++.+....+|..-|
T Consensus 8 CP~C~~~l~s~~~L~~Hy 25 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHY 25 (34)
T ss_dssp CTTTCCEESSHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHH
Confidence 999988876665555544
No 318
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=59.21 E-value=21 Score=20.43 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=29.2
Q ss_pred CC-CeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHH-HhcC
Q 031257 21 RG-HEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYD-KYKD 63 (163)
Q Consensus 21 ~G-~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~-~~~~ 63 (163)
|| -.+.+-++.+..+.|.+-++ |..|...-..+.+..+ .+++
T Consensus 23 dGGGdvelv~v~~g~V~v~l~Ga-C~gc~Tlk~gIe~~L~~~vpe 66 (74)
T 1th5_A 23 TGGGGLQFLMIKGPIVKVRLTGP-AAVVRTVRIAVSKKLREKIPS 66 (74)
T ss_dssp TTCCCCCCCEEETTEEEECCCSS-SSSSSSHHHHHHHHHHHHCTT
T ss_pred cCCCcEEEEEEeCCEEEEEEecC-CcchHHHHHHHHHHHHHHCCC
Confidence 56 77888888878888888866 8889655456665444 4443
No 319
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=58.83 E-value=5.4 Score=27.25 Aligned_cols=32 Identities=9% Similarity=0.038 Sum_probs=22.7
Q ss_pred cccCCccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 125 GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 125 ~~~~~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
|+ .++| +|+|+.+|+.+....|..+.+.+.++
T Consensus 166 gv--~g~P----t~~v~~~~~~~~~~~g~~~~e~~~~~ 197 (208)
T 3kzq_A 166 GV--NSYP----SLVLQINDAYFPIEVDYLSTEPTLKL 197 (208)
T ss_dssp TC--CSSS----EEEEEETTEEEEECCCSSCSHHHHHH
T ss_pred CC--Cccc----EEEEEECCEEEEeeCCCCCHHHHHHH
Confidence 55 6777 56777778887777777777776654
No 320
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=58.27 E-value=10 Score=30.38 Aligned_cols=22 Identities=14% Similarity=0.160 Sum_probs=15.9
Q ss_pred EEEEeccCCCCCChhhHHHHHH
Q 031257 35 LLIVNVASKCGMTNSNYIELSQ 56 (163)
Q Consensus 35 vlv~f~~s~C~~C~~~~~~l~~ 56 (163)
-++.|..+|||+|...-.-|.+
T Consensus 19 ~v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 19 AVILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHH
Confidence 4666888999999866555543
No 321
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=53.16 E-value=14 Score=21.16 Aligned_cols=35 Identities=9% Similarity=0.168 Sum_probs=23.6
Q ss_pred ccCCcEEEE-EeccCCCCCChh------hHHHHHHHHHHhcC
Q 031257 29 TYKGKVLLI-VNVASKCGMTNS------NYIELSQLYDKYKD 63 (163)
Q Consensus 29 ~~~gk~vlv-~f~~s~C~~C~~------~~~~l~~~~~~~~~ 63 (163)
.++|+.++| .+.+.+|+.|-+ +...+.++..+|+.
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 468887666 557888987744 56666666666654
No 322
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=52.88 E-value=8.5 Score=26.10 Aligned_cols=27 Identities=15% Similarity=0.053 Sum_probs=23.1
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhc
Q 031257 36 LIVNVASKCGMTNSNYIELSQLYDKYK 62 (163)
Q Consensus 36 lv~f~~s~C~~C~~~~~~l~~~~~~~~ 62 (163)
|..|+-.-||+|-...+.|.++.+++.
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 555667889999999999999999885
No 323
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=49.72 E-value=35 Score=23.85 Aligned_cols=41 Identities=10% Similarity=0.217 Sum_probs=28.7
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcC-CCeEEEEEe
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFP 72 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~-~~~~ii~is 72 (163)
|+..|-+|+..-||+|-.-...|.++.+++.+ .++.|.-..
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P 42 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRS 42 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEE
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEE
Confidence 34444444467899999999999999988764 356665544
No 324
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=49.56 E-value=63 Score=22.48 Aligned_cols=42 Identities=19% Similarity=0.108 Sum_probs=23.3
Q ss_pred CcEEEEEeccCCCCCCh----hhHHHHHHHHHHhcCC--CeEEEEEec
Q 031257 32 GKVLLIVNVASKCGMTN----SNYIELSQLYDKYKDQ--GLEILAFPC 73 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~----~~~~~l~~~~~~~~~~--~~~ii~is~ 73 (163)
+++++|.|+...+..+. .....+.+++++|+++ .+.++.++.
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~ 176 (252)
T 2h8l_A 129 GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASR 176 (252)
T ss_dssp SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEET
T ss_pred CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEch
Confidence 34455555543332222 2456677788888753 377777764
No 325
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=48.36 E-value=45 Score=20.49 Aligned_cols=35 Identities=17% Similarity=0.335 Sum_probs=24.8
Q ss_pred ccCCCC--CC----hhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 40 VASKCG--MT----NSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 40 ~~s~C~--~C----~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.|-.|+ .| -.++-.+....+.++++|+.+--.++.
T Consensus 12 pamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~ 52 (106)
T 3ktb_A 12 PAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLR 52 (106)
T ss_dssp CSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETT
T ss_pred hhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 355675 34 446777777777788888888888875
No 326
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=44.69 E-value=27 Score=23.82 Aligned_cols=65 Identities=17% Similarity=0.154 Sum_probs=32.6
Q ss_pred CCCccc--ceEEecCCCCeeecccc----CCcEEEEEeccCC-CCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 8 NPESIF--DLSVKDARGHEVDLSTY----KGKVLLIVNVASK-CGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 8 ~~~~~p--~f~l~~~~G~~~~l~~~----~gk~vlv~f~~s~-C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.+.+.- .+.+...+| .+...-+ +++++||.+.+.. ..... ....+..+.+.+.++|+.++.++..
T Consensus 17 ~~~~~e~~~~~~~~~~g-~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~ 88 (249)
T 2i3d_A 17 LYFQGHMPEVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTM-NNQIVYQLFYLFQKRGFTTLRFNFR 88 (249)
T ss_dssp -------CEEEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCT-TSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred ccccCceeEEEEECCCc-eEEEEEEcCCCCCCCEEEEECCCcccCCCc-cchHHHHHHHHHHHCCCEEEEECCC
Confidence 444444 777888888 4543222 3467788777531 11111 0112234455555668999999764
No 327
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=43.59 E-value=72 Score=25.84 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=35.9
Q ss_pred ccCCCcccceEEec-CCCCeeecccc---CCcEEEEEeccCCCCCCh-hhHHHHHH
Q 031257 6 IQNPESIFDLSVKD-ARGHEVDLSTY---KGKVLLIVNVASKCGMTN-SNYIELSQ 56 (163)
Q Consensus 6 ~~~~~~~p~f~l~~-~~G~~~~l~~~---~gk~vlv~f~~s~C~~C~-~~~~~l~~ 56 (163)
+.+|..+|+..+.. .+|.++.+.++ .|+++|+.|-....+.+. ..+..+.+
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~~~~~~~~~~~~~~~~~~ 522 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFAAQNDLAQPESGLLALCR 522 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEECCTTTTTCTTSHHHHHHH
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEecCCCCchhhHHHHHHHHH
Confidence 45799999999876 48999988884 368999998654444444 44444443
No 328
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=43.54 E-value=32 Score=21.32 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 49 SNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 49 ~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++-.+....+.++++|+.+--.++.
T Consensus 24 ~~L~~~~~~~~~lk~~Gi~V~RyNL~ 49 (110)
T 3kgk_A 24 QALVDFSTDVQWLKQSGVQIERFNLA 49 (110)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEETT
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccc
Confidence 35667777777777778888888875
No 329
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=43.36 E-value=75 Score=21.55 Aligned_cols=59 Identities=17% Similarity=0.128 Sum_probs=36.3
Q ss_pred cccce-EEecCCCCeeecccc----CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 11 SIFDL-SVKDARGHEVDLSTY----KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 11 ~~p~f-~l~~~~G~~~~l~~~----~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+..++ .+.+.+|..+....+ +++++||.+.+..+..- . +..+.+.+.++|+.++.++..
T Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~--~---~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 15 PYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG--R---YEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp BGGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG--G---GHHHHHHHHHTTEEEEEECCT
T ss_pred ccCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh--H---HHHHHHHHHhCCCcEEEeCCC
Confidence 33445 677889987766554 23688888887544321 1 233444444557999999874
No 330
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=43.22 E-value=13 Score=25.73 Aligned_cols=35 Identities=6% Similarity=-0.023 Sum_probs=25.6
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEE
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAF 71 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~i 71 (163)
..|..|+-.-||+|-...+.|.++.+++ ++.|.--
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~ 40 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLR 40 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 4566666788999999999999987654 3555443
No 331
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=41.65 E-value=53 Score=19.38 Aligned_cols=43 Identities=7% Similarity=0.176 Sum_probs=28.0
Q ss_pred CCCeeeccccCCcEEEEEeccC--CCCCChhhHH-HHHHHH-HHhcC
Q 031257 21 RGHEVDLSTYKGKVLLIVNVAS--KCGMTNSNYI-ELSQLY-DKYKD 63 (163)
Q Consensus 21 ~G~~~~l~~~~gk~vlv~f~~s--~C~~C~~~~~-~l~~~~-~~~~~ 63 (163)
||-.+.+-++++..+.|.|-++ .||.....+. .+.+.. +.+++
T Consensus 26 dGGdvelv~v~~g~V~V~L~GaC~gCpss~~TLk~gIE~~L~~~vPe 72 (88)
T 1xhj_A 26 DGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPG 72 (88)
T ss_dssp HSCEEEEEECCSSEEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTT
T ss_pred cCCeEEEEEEECCEEEEEEeecCCCCcchHHHHHHHHHHHHHHhCCC
Confidence 6777888888888888888864 4666555555 444433 34443
No 332
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=40.77 E-value=1.6 Score=19.55 Aligned_cols=10 Identities=10% Similarity=0.282 Sum_probs=7.5
Q ss_pred CCCCChhhHH
Q 031257 43 KCGMTNSNYI 52 (163)
Q Consensus 43 ~C~~C~~~~~ 52 (163)
-||.|...+|
T Consensus 8 qcpvcqq~mp 17 (29)
T 3vhs_A 8 QCPVCQQMMP 17 (29)
T ss_dssp ECTTTCCEEE
T ss_pred eChHHHHhCc
Confidence 5899987654
No 333
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=39.98 E-value=15 Score=24.88 Aligned_cols=30 Identities=7% Similarity=-0.084 Sum_probs=20.0
Q ss_pred CccccCeeEEEECCCCcEEEEeCCCCCcchhhhc
Q 031257 129 DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEVI 162 (163)
Q Consensus 129 ~~ip~~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (163)
.++| ++++. .+|+.+....|..+.+.+.++
T Consensus 175 ~g~P---t~~i~-~~G~~~~~~~G~~~~~~l~~~ 204 (216)
T 2in3_A 175 SGFP---ALVVE-SGTDRYLITTGYRPIEALRQL 204 (216)
T ss_dssp CSSS---EEEEE-ETTEEEEEESSCCCHHHHHHH
T ss_pred cccc---eEEEE-ECCEEEEeccCCCCHHHHHHH
Confidence 5666 75554 468876567787777777654
No 334
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=38.94 E-value=31 Score=23.67 Aligned_cols=28 Identities=14% Similarity=0.031 Sum_probs=20.7
Q ss_pred CCcEEEEEeccCCCCCChhhHHHHHHHHHHh
Q 031257 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKY 61 (163)
Q Consensus 31 ~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~ 61 (163)
..+++||-|+++|| ....+.+.++++.+
T Consensus 26 ~~~v~vVgff~~~~---~~~~~~f~~~A~~l 53 (227)
T 4f9z_D 26 ATEVAVIGFFQDLE---IPAVPILHSMVQKF 53 (227)
T ss_dssp TSSEEEEEECSCSC---STHHHHHHHHTTTC
T ss_pred cCCeEEEEEecCCC---chhHHHHHHHHHhC
Confidence 35789999999985 56667777766665
No 335
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=38.89 E-value=1e+02 Score=21.75 Aligned_cols=57 Identities=18% Similarity=0.135 Sum_probs=36.5
Q ss_pred cce-EEecCCCCeeecccc----CCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 13 FDL-SVKDARGHEVDLSTY----KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 13 p~f-~l~~~~G~~~~l~~~----~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
.++ .+...+|..+....+ .++++||.+.+..+... .+..+.+.+.++|+.++.++..
T Consensus 35 ~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~vi~~D~~ 96 (342)
T 3hju_A 35 QDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDHV 96 (342)
T ss_dssp TSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHTTTEEEEEECCT
T ss_pred ccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-----hHHHHHHHHHhCCCeEEEEcCC
Confidence 345 677788887765554 23678888876544322 2334555556668999999874
No 336
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=38.16 E-value=18 Score=22.17 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=13.2
Q ss_pred eEEEECCCCcEEEEe
Q 031257 136 AKFLVDKNGQVVDRY 150 (163)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (163)
+..|||++|+|++-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 679999999999865
No 337
>1yd6_A UVRC; DNA binding protein; 2.00A {Bacillus caldotenax}
Probab=37.13 E-value=37 Score=20.51 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=15.1
Q ss_pred ccccCeeEE-EECCCCcEEEEeCC
Q 031257 130 DIQWNFAKF-LVDKNGQVVDRYYP 152 (163)
Q Consensus 130 ~ip~~~~~~-lid~~G~i~~~~~g 152 (163)
.+|..|..| +.|.+|+|+|....
T Consensus 11 ~lP~~pGVY~~~d~~g~vlYVGKA 34 (99)
T 1yd6_A 11 VLPEQPGCYLMKDKHGTVIYVGKA 34 (99)
T ss_dssp TCCSSCEEEEEECSSCCEEEEEEE
T ss_pred hCCCCCeEEEEEcCCCCEEEEecC
Confidence 455555655 45889999987443
No 338
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=35.20 E-value=1.8e+02 Score=23.66 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=29.6
Q ss_pred ccCCCcccceEEec-CCCCeeeccc-cC--CcEEEEEeccC
Q 031257 6 IQNPESIFDLSVKD-ARGHEVDLST-YK--GKVLLIVNVAS 42 (163)
Q Consensus 6 ~~~~~~~p~f~l~~-~~G~~~~l~~-~~--gk~vlv~f~~s 42 (163)
+.+|..+|++.+.. .+|.++.+.+ +. |+++|+.|-..
T Consensus 479 ~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~ 519 (665)
T 1pn0_A 479 CVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGK 519 (665)
T ss_dssp SCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEEC
T ss_pred CCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCC
Confidence 46899999999876 4899999888 43 68999988654
No 339
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=34.85 E-value=16 Score=29.40 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=29.0
Q ss_pred ccCCCcccceEEecCCCCeeecccc--CCcEEEEEecc
Q 031257 6 IQNPESIFDLSVKDARGHEVDLSTY--KGKVLLIVNVA 41 (163)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~f~~ 41 (163)
+.+|..+|++.+...+|.+..|.++ .|+++||.|-.
T Consensus 445 ~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~~ 482 (570)
T 3fmw_A 445 PWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLAG 482 (570)
T ss_dssp SSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSSC
T ss_pred ccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEecC
Confidence 4578999999998778887788775 35899998864
No 340
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=34.84 E-value=63 Score=20.77 Aligned_cols=44 Identities=9% Similarity=0.043 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCcccee
Q 031257 53 ELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 102 (163)
Q Consensus 53 ~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (163)
...+..++++++|..++-.+.. .......+.+|+. ++++.++.+
T Consensus 28 ~~~~al~~l~~~G~~iii~TgR-----~~~~~~~~~~~l~-~~gi~~~~I 71 (142)
T 2obb_A 28 FAVETLKLLQQEKHRLILWSVR-----EGELLDEAIEWCR-ARGLEFYAA 71 (142)
T ss_dssp THHHHHHHHHHTTCEEEECCSC-----CHHHHHHHHHHHH-TTTCCCSEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCC-----CcccHHHHHHHHH-HcCCCeEEE
Confidence 3445555556678888877642 0012567788886 788888776
No 341
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=34.77 E-value=1.2e+02 Score=21.70 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=35.5
Q ss_pred CcccceEEecCCCCeeeccccC-------CcEEEEEeccCCCCCChhhH-HHHHHHHH---Hhc-----CCCeEEEEEec
Q 031257 10 ESIFDLSVKDARGHEVDLSTYK-------GKVLLIVNVASKCGMTNSNY-IELSQLYD---KYK-----DQGLEILAFPC 73 (163)
Q Consensus 10 ~~~p~f~l~~~~G~~~~l~~~~-------gk~vlv~f~~s~C~~C~~~~-~~l~~~~~---~~~-----~~~~~ii~is~ 73 (163)
..+|-|.++|.+|.++-.+.-. ++.+..+|. +.... ..|.++.+ .-+ ..++.|..|++
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~------s~~dA~~~L~~lk~~~~~np~~~~~~~~~kV~~vsL 85 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM------SRQEAQAFINELRNAKNKDPKMQEIVKSLQVTAVPL 85 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES------CHHHHHHHHHHHHHCSSCCHHHHHHHTTCEEEEEEH
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe------cHHHHHHHHHHHHhccccCchhhhhccCceEEEeeH
Confidence 4679999999999988765432 344444443 34433 33334444 111 22589999987
Q ss_pred C
Q 031257 74 N 74 (163)
Q Consensus 74 d 74 (163)
+
T Consensus 86 ~ 86 (252)
T 4ev1_A 86 G 86 (252)
T ss_dssp H
T ss_pred H
Confidence 4
No 342
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=33.50 E-value=31 Score=19.06 Aligned_cols=24 Identities=17% Similarity=-0.053 Sum_probs=18.3
Q ss_pred eEEEECCCCcEEEEeCCCCCcchh
Q 031257 136 AKFLVDKNGQVVDRYYPTTSLLSL 159 (163)
Q Consensus 136 ~~~lid~~G~i~~~~~g~~~~~~~ 159 (163)
..-|...||+|+....+..+....
T Consensus 14 rfrLka~NGevI~sSe~Y~sk~~a 37 (64)
T 3bid_A 14 RWRLKAANHEIIAQGEGYTSKQNC 37 (64)
T ss_dssp EEEEECTTSCEEEECCCBSCHHHH
T ss_pred EEEEEeCCCCEEEECCCcCCHHHH
Confidence 577899999999977666665443
No 343
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=33.05 E-value=1.5e+02 Score=23.12 Aligned_cols=23 Identities=13% Similarity=0.218 Sum_probs=13.1
Q ss_pred CHHHHHHHHHhhcCCccceeeeeecC
Q 031257 83 SNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
..+.+.+.++ +.+..+-+. .|++
T Consensus 241 ~~~~l~~~v~-~~~adlgia--~DgD 263 (469)
T 3pdk_A 241 HPEVLAELVK-EKGADIGLA--FDGD 263 (469)
T ss_dssp STHHHHHHHH-HHTCSEEEE--ECTT
T ss_pred CHHHHHHHHH-hcCCcEEEE--ECCC
Confidence 4556666665 556666555 4444
No 344
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=31.93 E-value=70 Score=23.87 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=26.1
Q ss_pred CcEEEEEeccCCCCC-ChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 32 GKVLLIVNVASKCGM-TNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 32 gk~vlv~f~~s~C~~-C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+++++|.|+..+|.. |......+.+...++++ .+.++.+..+
T Consensus 236 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~ 278 (382)
T 2r2j_A 236 GLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCD 278 (382)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETT
T ss_pred CCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchH
Confidence 567778888777643 33333555555556654 4888888753
No 345
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=31.11 E-value=1.8e+02 Score=22.40 Aligned_cols=12 Identities=42% Similarity=0.686 Sum_probs=8.2
Q ss_pred eEEEECCCCcEE
Q 031257 136 AKFLVDKNGQVV 147 (163)
Q Consensus 136 ~~~lid~~G~i~ 147 (163)
+..++|.+|+++
T Consensus 244 R~~~vd~~G~~l 255 (443)
T 3i3w_A 244 RIIIVDENGQEI 255 (443)
T ss_dssp BEEEECTTSCEE
T ss_pred eEEEECCCCcEe
Confidence 456777777765
No 346
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=30.42 E-value=29 Score=22.38 Aligned_cols=14 Identities=36% Similarity=0.581 Sum_probs=12.6
Q ss_pred eEEEECCCCcEEEE
Q 031257 136 AKFLVDKNGQVVDR 149 (163)
Q Consensus 136 ~~~lid~~G~i~~~ 149 (163)
..||+|.+|+|+..
T Consensus 57 r~~l~d~eG~Il~~ 70 (138)
T 3v67_A 57 RVFFSDYNGNVLTT 70 (138)
T ss_dssp EEEEECTTSCEECC
T ss_pred cEEEEcCCCCEecC
Confidence 79999999999874
No 347
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=30.18 E-value=1.3e+02 Score=22.80 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=30.4
Q ss_pred hhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCcc
Q 031257 48 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEF 99 (163)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (163)
....|.+.++.+.++++|+.++-||. +...+.+.+.++.+..|
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSg---------g~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSA---------SFIDIVRAFATDTNNNY 262 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEE---------EEHHHHHHHHHCTTSSC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcC---------CcHHHHHHHHHHhCccc
Confidence 34578899999999999999999985 34444444444666544
No 348
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=29.43 E-value=1.3e+02 Score=20.78 Aligned_cols=29 Identities=7% Similarity=0.028 Sum_probs=20.2
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcC
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKD 63 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~ 63 (163)
.++++|-|+.+| |....+.+.+++..+++
T Consensus 24 ~~v~vvgff~~~---~~~~~~~f~~~A~~lr~ 52 (252)
T 2h8l_A 24 KDASIVGFFDDS---FSEAHSEFLKAASNLRD 52 (252)
T ss_dssp SSCEEEEEESCT---TSHHHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCC---CChHHHHHHHHHHhccc
Confidence 357788888887 45566677777777644
No 349
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=27.35 E-value=1e+02 Score=18.32 Aligned_cols=39 Identities=13% Similarity=0.119 Sum_probs=25.1
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
.+++.+-++- .......|.+.++.+.++++|+.+.-+|-
T Consensus 4 ~i~~D~DgtL-~~~~~~~~~~~~~l~~L~~~G~~~~i~S~ 42 (137)
T 2pr7_A 4 GLIVDYAGVL-DGTDEDQRRWRNLLAAAKKNGVGTVILSN 42 (137)
T ss_dssp EEEECSTTTT-SSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEecccee-cCCCccCccHHHHHHHHHHCCCEEEEEeC
Confidence 3444444443 22344567788888888888888877774
No 350
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=26.23 E-value=51 Score=20.36 Aligned_cols=9 Identities=0% Similarity=-0.045 Sum_probs=5.0
Q ss_pred HHHHHHHHH
Q 031257 84 NDQIADFVC 92 (163)
Q Consensus 84 ~~~~~~~~~ 92 (163)
...+.+.+.
T Consensus 96 ~~~l~~~l~ 104 (138)
T 5nul_A 96 MRDFEERMN 104 (138)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455566655
No 351
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=25.96 E-value=14 Score=22.85 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=18.9
Q ss_pred CCCCCChhhHHHHHHHHHHhcC
Q 031257 42 SKCGMTNSNYIELSQLYDKYKD 63 (163)
Q Consensus 42 s~C~~C~~~~~~l~~~~~~~~~ 63 (163)
..|+.|+.++.+|+++...+..
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~ 73 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQ 73 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTT
T ss_pred HhCHHHHHHHHHHHHHHHHHhc
Confidence 4799999999999998887764
No 352
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=25.88 E-value=45 Score=19.70 Aligned_cols=14 Identities=7% Similarity=0.197 Sum_probs=12.4
Q ss_pred eEEEECCCCcEEEE
Q 031257 136 AKFLVDKNGQVVDR 149 (163)
Q Consensus 136 ~~~lid~~G~i~~~ 149 (163)
..+++|++|+|++.
T Consensus 17 gviv~D~~g~I~~~ 30 (121)
T 4hi4_A 17 NVMIADNDLNIIYM 30 (121)
T ss_dssp EEEEEETTCBEEEE
T ss_pred cEEEEcCCCeEEEe
Confidence 46899999999987
No 353
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=25.70 E-value=1.5e+02 Score=19.59 Aligned_cols=52 Identities=6% Similarity=0.123 Sum_probs=31.0
Q ss_pred EecCCCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 17 l~~~~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
+...+|..+.......++.||.+.+..+.. .. +..+.+.+. .++.++.++..
T Consensus 7 ~~~~~g~~l~~~~~g~~~~vv~lHG~~~~~--~~---~~~~~~~l~-~~~~vi~~d~~ 58 (262)
T 3r0v_A 7 VPSSDGTPIAFERSGSGPPVVLVGGALSTR--AG---GAPLAERLA-PHFTVICYDRR 58 (262)
T ss_dssp EECTTSCEEEEEEEECSSEEEEECCTTCCG--GG---GHHHHHHHT-TTSEEEEECCT
T ss_pred EEcCCCcEEEEEEcCCCCcEEEECCCCcCh--HH---HHHHHHHHh-cCcEEEEEecC
Confidence 456678777665553345666666644432 11 234445555 57999999874
No 354
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=24.75 E-value=1.4e+02 Score=23.08 Aligned_cols=24 Identities=13% Similarity=0.223 Sum_probs=11.8
Q ss_pred CCHHHHHHHHHhhcCCccceeeeeecC
Q 031257 82 GSNDQIADFVCTRFKSEFPIFEKIDVN 108 (163)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (163)
...+.+.+.++ +.+..+-+. .|++
T Consensus 222 ~~l~~l~~~v~-~~~adlgia--~DgD 245 (455)
T 1wqa_A 222 ENLKEFMEIVK-ALGADFGVA--QDGD 245 (455)
T ss_dssp TTTHHHHHHHH-HHTCSEEEE--ECTT
T ss_pred hHHHHHHHHHH-HcCCCEEEE--ECCC
Confidence 34445555554 455555444 4444
No 355
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=24.57 E-value=73 Score=23.29 Aligned_cols=38 Identities=13% Similarity=0.049 Sum_probs=28.8
Q ss_pred CCCeeeccccCCcEEEEEeccCCCCCChhhHHHHHHHH
Q 031257 21 RGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLY 58 (163)
Q Consensus 21 ~G~~~~l~~~~gk~vlv~f~~s~C~~C~~~~~~l~~~~ 58 (163)
.|..+....-....+-|.|=.+|||+..+.+..|++..
T Consensus 208 ~Gh~~~~~r~g~~~L~v~FDTPW~PPs~ev~~~lS~~f 245 (300)
T 2ijr_A 208 SGQNIIWQRDRINSLRLDFDSPSYPPSAELMGELSAVF 245 (300)
T ss_dssp SCEEEEEEEEETTEEEEEEEEESSCCCHHHHHHHHHHT
T ss_pred CCCceeEEeCCCCeEEEeccCCCCCChHHHHHHHhccC
Confidence 45555555444568899999999999999988887654
No 356
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=24.53 E-value=23 Score=24.08 Aligned_cols=21 Identities=14% Similarity=0.083 Sum_probs=17.4
Q ss_pred CCCCCChhhHHHHHHHHHHhc
Q 031257 42 SKCGMTNSNYIELSQLYDKYK 62 (163)
Q Consensus 42 s~C~~C~~~~~~l~~~~~~~~ 62 (163)
..|+.|+.++.+++++...+-
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 469999999999998886553
No 357
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=24.21 E-value=1.5e+02 Score=19.06 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=33.1
Q ss_pred cceEEecCCCCeeecccc-----CCcEEEEEeccC----CCCCChhhHHHHHHHHHHhcCCCeEEEEEecC
Q 031257 13 FDLSVKDARGHEVDLSTY-----KGKVLLIVNVAS----KCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (163)
Q Consensus 13 p~f~l~~~~G~~~~l~~~-----~gk~vlv~f~~s----~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d 74 (163)
-.+.+...+| .+...-+ +.+++||.+.+. +.... .. +..+.+.+.++|+.++.++..
T Consensus 7 ~~~~~~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~-~~---~~~~~~~l~~~g~~v~~~d~~ 72 (208)
T 3trd_A 7 EDFLIQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNN-KV---VTTLAKALDELGLKTVRFNFR 72 (208)
T ss_dssp SCEEEECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTC-HH---HHHHHHHHHHTTCEEEEECCT
T ss_pred ceEEEECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCC-ch---HHHHHHHHHHCCCEEEEEecC
Confidence 3466777778 5543322 145888888862 22222 12 234445555568999999875
No 358
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=23.15 E-value=1.9e+02 Score=20.09 Aligned_cols=59 Identities=3% Similarity=-0.139 Sum_probs=31.6
Q ss_pred EEEEEeccCCCCCChhhHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCCCHHHHHHHHHhhcCCccce
Q 031257 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPI 101 (163)
Q Consensus 34 ~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~~~~ii~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (163)
.++.++=+|-...-....+...+..+++.++|+.++-.+- .+...+..++. ..+.+-++
T Consensus 23 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~iaTG--------R~~~~~~~~~~-~l~~~~~~ 81 (285)
T 3pgv_A 23 VVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATG--------RHYIDVGQIRD-NLGIRSYM 81 (285)
T ss_dssp EEEEECCCCCSCTTSCCCHHHHHHHHHHHTTTCEEEEECS--------SCGGGGHHHHH-HHCSCCEE
T ss_pred EEEEeCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcC--------CCHHHHHHHHH-hcCCCccE
Confidence 4444444444332222334555555666777888777764 34555566654 55665433
No 359
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.54 E-value=66 Score=18.26 Aligned_cols=14 Identities=14% Similarity=0.188 Sum_probs=12.1
Q ss_pred eEEEECCCCcEEEE
Q 031257 136 AKFLVDKNGQVVDR 149 (163)
Q Consensus 136 ~~~lid~~G~i~~~ 149 (163)
..+++|.+|+|++.
T Consensus 19 ~i~~~D~~g~I~~~ 32 (115)
T 3b33_A 19 ATLILDDGLAIRYA 32 (115)
T ss_dssp EEEEECTTCBEEEE
T ss_pred eEEEECCCCcEEEE
Confidence 46899999999986
No 360
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=22.08 E-value=62 Score=20.65 Aligned_cols=17 Identities=12% Similarity=-0.054 Sum_probs=14.0
Q ss_pred eEEEECCCCcEEEEeCC
Q 031257 136 AKFLVDKNGQVVDRYYP 152 (163)
Q Consensus 136 ~~~lid~~G~i~~~~~g 152 (163)
.++++|++|+|++....
T Consensus 31 gI~~vD~~g~I~~~N~a 47 (151)
T 2qkp_A 31 EITFVNKDDIFQYYNDS 47 (151)
T ss_dssp EEEEEETTSBEEEECCC
T ss_pred ceEEEcCCCeEEEEeCC
Confidence 46899999999987554
No 361
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=21.95 E-value=2e+02 Score=19.81 Aligned_cols=30 Identities=7% Similarity=0.269 Sum_probs=22.0
Q ss_pred CcEEEEEeccCCCCCChhhHHHHHHHHHHhcCC
Q 031257 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ 64 (163)
Q Consensus 32 gk~vlv~f~~s~C~~C~~~~~~l~~~~~~~~~~ 64 (163)
.++++|-|+.++| ....+.+.++++.+++.
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~ 54 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLRED 54 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTT
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcC
Confidence 5688899998874 56777777777777543
No 362
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=21.56 E-value=72 Score=20.01 Aligned_cols=15 Identities=20% Similarity=0.299 Sum_probs=12.9
Q ss_pred eEEEECCCCcEEEEe
Q 031257 136 AKFLVDKNGQVVDRY 150 (163)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (163)
++.|+|++|+.++.+
T Consensus 101 ~t~L~n~~Gee~A~~ 115 (123)
T 3hn9_A 101 KVILKNSQGEEVAQR 115 (123)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 579999999998764
No 363
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=20.75 E-value=1.7e+02 Score=18.51 Aligned_cols=27 Identities=4% Similarity=0.087 Sum_probs=20.0
Q ss_pred CChhhHHHHHHHHHHhcCCCeEEEEEec
Q 031257 46 MTNSNYIELSQLYDKYKDQGLEILAFPC 73 (163)
Q Consensus 46 ~C~~~~~~l~~~~~~~~~~~~~ii~is~ 73 (163)
.-....+.+++++++|+++ +.++.++.
T Consensus 46 ~~~~~~~~~~~vAk~fkgk-i~Fv~vd~ 72 (147)
T 3bj5_A 46 DYDGKLSNFKTAAESFKGK-ILFAFIDS 72 (147)
T ss_dssp SHHHHHHHHHHHHHTTTTT-CEEEEECT
T ss_pred hHHHHHHHHHHHHHHcCCc-eEEEEEec
Confidence 3334568899999999875 77777764
No 364
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=20.25 E-value=1.8e+02 Score=19.54 Aligned_cols=39 Identities=10% Similarity=0.265 Sum_probs=30.0
Q ss_pred EEEEEeccCCCC--------CChhhHHHHHHHHHHhc---CCCeEEEEEe
Q 031257 34 VLLIVNVASKCG--------MTNSNYIELSQLYDKYK---DQGLEILAFP 72 (163)
Q Consensus 34 ~vlv~f~~s~C~--------~C~~~~~~l~~~~~~~~---~~~~~ii~is 72 (163)
.++|++-...|+ .....++.++++.+.++ ..|+.|+.+.
T Consensus 10 LlvID~Q~~f~~~~g~l~~~~~~~ii~~i~~Ll~~ar~~~~~g~pVi~t~ 59 (204)
T 3hb7_A 10 ILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQ 59 (204)
T ss_dssp EEEECCBTTTSSTTCTTCCGGGGGGHHHHHHHHHHHHHSSSSSEEEEEEE
T ss_pred EEEEcCchhhcCCCCcccCccHHHHHHHHHHHHHHHHhhhhcCCEEEEEE
Confidence 456666666554 45677899999999999 8899888875
No 365
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=20.06 E-value=79 Score=18.36 Aligned_cols=14 Identities=7% Similarity=0.145 Sum_probs=12.1
Q ss_pred eEEEECCCCcEEEE
Q 031257 136 AKFLVDKNGQVVDR 149 (163)
Q Consensus 136 ~~~lid~~G~i~~~ 149 (163)
.++++|++|+|++.
T Consensus 24 ~i~~~D~~g~i~~~ 37 (118)
T 3fg8_A 24 GFMALDEDLRIIYV 37 (118)
T ss_dssp EEEEECTTCBEEEE
T ss_pred eEEEECCCCeEEEE
Confidence 46899999999986
Done!