BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031259
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2
PE=1 SV=1
Length = 309
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 132/163 (80%)
Query: 1 MNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLS 60
MNR T FLRGAGGFSNSSQPFSY Y + VKIP+ QP V E+ TQPSQAL+YRLS
Sbjct: 147 MNRTTVFLRGAGGFSNSSQPFSYKNYPSNQGLAVKIPQRQPLTVCEERTQPSQALLYRLS 206
Query: 61 GDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVY 120
GDYNPLHSDP AK AGF RPILHGLCT+GFA++AIIK +C+GDP VK I RFL V+
Sbjct: 207 GDYNPLHSDPEFAKLAGFPRPILHGLCTLGFAIKAIIKCVCKGDPTAVKTISGRFLTTVF 266
Query: 121 PGETLVTEMWLQGLRVIYQVKVKERNRSALSGFVDVHRLASSL 163
PGETL+TEMWL+GLRVIYQ KVKERN++ L+G+VD+ L+SSL
Sbjct: 267 PGETLITEMWLEGLRVIYQTKVKERNKTVLAGYVDIRGLSSSL 309
>sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=fox-2 PE=1 SV=1
Length = 894
Score = 135 bits (340), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/151 (47%), Positives = 88/151 (58%), Gaps = 9/151 (5%)
Query: 2 NRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSG 61
N MT FLRG GGF +P + + K P P AV E T QA +YRLSG
Sbjct: 747 NEMTVFLRGCGGFGGQKKPAD----RGASTAANKPPARSPDAVVEVQTTEEQAAIYRLSG 802
Query: 62 DYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYP 121
DYNPLH DP AK GF PILHGLC+ G A +A+ + + KNI RF V P
Sbjct: 803 DYNPLHVDPAFAKVGGFKVPILHGLCSFGIAGKAVYEKYGK-----FKNIKVRFAGTVNP 857
Query: 122 GETLVTEMWLQGLRVIYQVKVKERNRSALSG 152
G+TLVTEMW +G +V++Q KVKE + A+SG
Sbjct: 858 GQTLVTEMWKEGNKVVFQTKVKETGKLAISG 888
>sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens
GN=HSD17B4 PE=1 SV=3
Length = 736
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 2 NRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSV-VKIPKSQPFAVFEDYTQPSQALVYRLS 60
N+ + FL G+GGF K + V V V IP P AV D T +QA +YRLS
Sbjct: 457 NQFSLFLVGSGGFGG--------KRTSDKVKVAVAIPNRPPDAVLTDTTSLNQAALYRLS 508
Query: 61 GDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVY 120
GD+NPLH DP A AGF +PILHGLCT GF+ R +++ D + K I +RF VY
Sbjct: 509 GDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQFADNDVSRFKAIKARFAKPVY 568
Query: 121 PGETLVTEMWLQGLRVIYQVKVKERNRSALS-GFVDV 156
PG+TL TEMW +G R+ +Q KV+E +S +VD+
Sbjct: 569 PGQTLQTEMWKEGNRIHFQTKVQETGDIVISNAYVDL 605
>sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme type 2 OS=Mus musculus
GN=Hsd17b4 PE=1 SV=3
Length = 735
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Query: 32 SVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGF 91
+ V +P P AV D T +QA +YRLSGD+NPLH DP A AGF +PILHGLCT GF
Sbjct: 479 AAVAVPNRPPDAVLRDATSLNQAALYRLSGDWNPLHIDPDFASVAGFEKPILHGLCTFGF 538
Query: 92 AVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQGLRVIYQVKVKERNRSALS 151
+ R +++ D + K I RF VYPG+TL TEMW +G R+ +Q KV E +S
Sbjct: 539 SARHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVHETGDVVIS 598
Query: 152 -GFVDV 156
+VD+
Sbjct: 599 NAYVDL 604
>sp|Q9VXJ0|DHB4_DROME Peroxisomal multifunctional enzyme type 2 OS=Drosophila
melanogaster GN=Mfe2 PE=1 SV=1
Length = 598
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 2 NRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSG 61
N+ T F+ GAG F P + +P+ P QP A + T QA +YRLSG
Sbjct: 442 NQSTTFIVGAGKFGGKKDPIA----GVVPLQ--PAPNRQPDATVQYTTSEDQAALYRLSG 495
Query: 62 DYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYP 121
D NPLH DP +A AGF PILHGLCT+GF+VRA++ +P + K + RF V P
Sbjct: 496 DKNPLHIDPQMALLAGFKTPILHGLCTLGFSVRAVLAQFADNNPALFKAVKVRFSGPVIP 555
Query: 122 GETLVTEMWLQGLRVIYQVKVKERNRSALSG-FVDVHRLASSL 163
G+TL ++W QG R+ ++ V E + +SG +VD+ + L
Sbjct: 556 GQTLRVDLWKQGTRINFRTVVVETGKEVISGAYVDLKSSQAKL 598
>sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus
GN=Hsd17b4 PE=1 SV=3
Length = 735
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Query: 32 SVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGF 91
+ V +P P AV D T +QA +YRLSGD NPLH DP A AGF +PILHGLCT GF
Sbjct: 479 AAVAVPSRPPDAVLRDTTSLNQAALYRLSGDSNPLHIDPSFASIAGFEKPILHGLCTFGF 538
Query: 92 AVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQGLRVIYQVKVKERNRSALS 151
+ R +++ D + K I RF VYPG+TL TEMW +G R+ +Q KV+E +S
Sbjct: 539 SARHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDIVIS 598
Query: 152 -GFVDV 156
+VD+
Sbjct: 599 NAYVDL 604
>sp|Q54XZ0|MFEB_DICDI Probable enoyl-CoA hydratase 2 OS=Dictyostelium discoideum GN=mfeB
PE=2 SV=1
Length = 294
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 34 VKIPKSQ-PFAVFEDYTQPSQALVYRLSG-DYNPLHSDPMVAKAAGFSRPILHGLCTMGF 91
++IPK + P A+ + T QA++YRL+G D NPLH DP ++K GF PILHGLCT G
Sbjct: 160 IQIPKDRAPDAISKQATSEDQAVIYRLAGGDLNPLHIDPEMSKIGGFEVPILHGLCTYGI 219
Query: 92 AVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMW-LQGLRVIYQVKVKERNRSAL 150
A R +++ C DP+ +K+I +RF HVYPGET+ TEMW + +++Q K L
Sbjct: 220 ASRGVLEHFCDNDPSRLKSIKTRFTKHVYPGETIETEMWKINPTTILFQSKTNRDGSYVL 279
Query: 151 SGFVDV 156
S V +
Sbjct: 280 SSGVAI 285
>sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=1
SV=1
Length = 900
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 46 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDP 105
E T QA +YRLSGD+NPLH DP +AKA F PILHGLCT+G + +A+ F G
Sbjct: 787 EISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGLCTLGISAKAL--FEHYGPY 844
Query: 106 NMVKNIFSRFLLHVYPGETLVTEMWLQGLRVIYQVKVKERN 146
+K RF V+PG+TL + W QG V++Q RN
Sbjct: 845 EELK---VRFTNVVFPGDTLKVKAWKQGSVVVFQTIDTTRN 882
>sp|P22414|FOX2_CANTR Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis
PE=1 SV=2
Length = 906
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 37 PKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAI 96
PK P + A +YRLSGD NPLH DP AK A F +PILHG+CT G + +A+
Sbjct: 783 PKRAPDYQVDVPVSEDLAALYRLSGDRNPLHIDPNFAKGAKFPKPILHGMCTYGLSAKAL 842
Query: 97 I-KFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQG-LRVIYQVKVKERNRSALS 151
I KF M I +RF V+PGETL W + +++Q V +R A++
Sbjct: 843 IDKF------GMFNEIKARFTGIVFPGETLRVLAWKESDDTIVFQTHVVDRGTIAIN 893
>sp|Q9UUG0|FAS1_SCHPO Fatty acid synthase subunit beta OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fas1 PE=1 SV=1
Length = 2073
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 49 TQPSQALVYRLSGDYNPLHSDPMVAKAAGF--SRPILHGLCTMGFAVRAIIKFICRGDPN 106
T P+ + +SGDYNP+H P A + I HG+ T A R + + + P
Sbjct: 1562 TPPTNSPYAEVSGDYNPIHVSPTFAAFVELPGTHGITHGMYTSAAARRFVETYAAQNVPE 1621
Query: 107 MVKNIFSRFLLHVYPGETLVTEMWLQGL---RVIYQVKV--KERNRSALSGFVDVHRLAS 161
VK+ F+ V P L+T++ G+ R I +V+V +E + L G +V + S
Sbjct: 1622 RVKHYEVTFVNMVLPNTELITKLSHTGMINGRKIIKVEVLNQETSEPVLVGTAEVEQPVS 1681
Query: 162 S 162
+
Sbjct: 1682 A 1682
>sp|Q00706|STCK_EMENI Putative sterigmatocystin biosynthesis fatty acid synthase subunit
beta OS=Emericella nidulans (strain FGSC A4 / ATCC 38163
/ CBS 112.46 / NRRL 194 / M139) GN=stcK PE=3 SV=2
Length = 1914
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 48 YTQPSQALVYRL-SGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFI 100
+T P+Q+ Y + SGD NP+H P+ ++ AG +P++HGL + VR I+++I
Sbjct: 1427 FTAPAQSEGYAMVSGDTNPIHVCPLFSRFAGLGQPVVHGL-HLSATVRRILEWI 1479
>sp|O32472|PHAJ_AERPU (R)-specific enoyl-CoA hydratase OS=Aeromonas punctata GN=phaJ PE=1
SV=1
Length = 134
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 59 LSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLH 118
LS D+NPLH DP A F RPI+HG+ + ++ G ++ F L
Sbjct: 29 LSEDFNPLHLDPAFAATTAFERPIVHGML-LASLFSGLLGQQLPGKGSIYLGQSLSFKLP 87
Query: 119 VYPGETLVTEMWLQGLR 135
V+ G+ + E+ + LR
Sbjct: 88 VFVGDEVTAEVEVTALR 104
>sp|P34229|FAS1_YARLI Fatty acid synthase subunit beta OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=FAS1 PE=3 SV=2
Length = 2086
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 34 VKIPKSQPFAVFED---YTQPSQALVYR-LSGDYNPLHSDPMVAKAAGFSRPILHGLCTM 89
V+ K P + +D + PS Y +SGDYNP+H A A I HG+ +
Sbjct: 1558 VEFEKPIPLSKADDLLSFKAPSSNEPYAGVSGDYNPIHVSRAFASYASLPGTITHGMYSS 1617
Query: 90 GFAVRAIIK-FICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQGL---RVIYQVKVKER 145
AVR++I+ + + + V+ +F V P + +VT + G+ R I +V R
Sbjct: 1618 A-AVRSLIEVWAAENNVSRVRAFSCQFQGMVLPNDEIVTRLEHVGMINGRKIIKVTSTNR 1676
Query: 146 NRSA--LSGFVDVHRLASSL 163
A LSG +V + S+
Sbjct: 1677 ETEAVVLSGEAEVEQPISTF 1696
>sp|P07149|FAS1_YEAST Fatty acid synthase subunit beta OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FAS1 PE=1 SV=2
Length = 2051
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 41 PFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIK-F 99
P AV + YT + R+SGD NP+H A A I HG+ + +VRA+I+ +
Sbjct: 1538 PIAVLDSYTPSTNEPYARVSGDLNPIHVSRHFASYANLPGTITHGMFSSA-SVRALIENW 1596
Query: 100 ICRGDPNMVKNIFSRFLLHVYPGETLVTEM----WLQGLRVIYQVKVKERNRSALSGFVD 155
+ V+ +F+ V P L T + + G ++I E + L+G +
Sbjct: 1597 AADSVSSRVRGYTCQFVDMVLPNTALKTSIQHVGMINGRKLIKFETRNEDDVVVLTGEAE 1656
Query: 156 VHR 158
+ +
Sbjct: 1657 IEQ 1659
>sp|P86397|HTD2_HUMAN Hydroxyacyl-thioester dehydratase type 2, mitochondrial OS=Homo
sapiens GN=RPP14 PE=1 SV=1
Length = 168
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 48 YTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNM 107
+TQ A L+GD NPLH + AK F I+HG+ G + A++ G +
Sbjct: 48 FTQTDVATFSELTGDVNPLHLNEDFAKHTKFGNTIVHGVLINGL-ISALLGTKMPGPGCV 106
Query: 108 VKNIFSRFLLHVYPGETLVTEMWLQGLR-----VIYQVKVKERNRSALSGFVDV 156
+ F +Y GE ++ ++ L+ + V E ++ + G+V V
Sbjct: 107 FLSQEISFPAPLYIGEVVLASAEVKKLKRFIAIIAVSCSVIESKKTVMEGWVKV 160
>sp|Q92215|TOXC_COCCA Putative fatty acid synthase subunit TOXC OS=Cochliobolus carbonum
GN=TOXC PE=3 SV=1
Length = 2080
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 13/129 (10%)
Query: 2 NRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVY-RLS 60
N + FL G +S +S F PVSV P + V PS Y R S
Sbjct: 1528 NTVIEFLDRYGSYSQNSVDFED------PVSV---PNNGESLVI---CAPSSNEAYARTS 1575
Query: 61 GDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVY 120
GD NP+H A+ AG I HG+ + + + G+ ++ F+ V
Sbjct: 1576 GDLNPIHVSRTFAEYAGLPGLITHGMYCSAAIQDLVERLVADGNAGRIRQFSMSFVGMVL 1635
Query: 121 PGETLVTEM 129
P + L ++
Sbjct: 1636 PNQKLEVKL 1644
>sp|P34731|FAS1_CANAX Fatty acid synthase subunit beta OS=Candida albicans GN=FAS1 PE=3
SV=1
Length = 2037
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 59 LSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAII-KFICRGDPNMVKNIFSRFLL 117
+SGDYNP+H + A A I HG+ + ++RA++ ++ V+ F+
Sbjct: 1542 VSGDYNPIHVSRVFAAYAKLPGTITHGMYSSA-SIRALVEEWAANNVAARVRAFKCDFVG 1600
Query: 118 HVYPGETLVTEM----WLQGLRVIYQVKVKERN 146
V P +TL T M + G ++I KV+ RN
Sbjct: 1601 MVLPNDTLQTTMEHVGMINGRKII---KVETRN 1630
>sp|Q8ZLD6|DTPB_SALTY Dipeptide and tripeptide permease B OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=dtpB PE=3 SV=1
Length = 489
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 61 GDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSR 114
G L P++A G++ + + LC G V ++ F CRG MVKNI S
Sbjct: 155 GSLLSLSLAPVIADKFGYA--VTYNLCGAGLIVALLVYFACRG---MVKNIGSE 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,784,477
Number of Sequences: 539616
Number of extensions: 2171413
Number of successful extensions: 5771
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5749
Number of HSP's gapped (non-prelim): 20
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)