Query 031261
Match_columns 163
No_of_seqs 222 out of 1516
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 18:30:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031261.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031261hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ctp_A DNAJ homolog subfamily 99.9 2E-22 6.8E-27 135.7 5.5 74 48-127 3-76 (78)
2 2dn9_A DNAJ homolog subfamily 99.9 5.2E-22 1.8E-26 133.9 7.4 74 48-127 3-77 (79)
3 2ej7_A HCG3 gene; HCG3 protein 99.9 4.8E-22 1.7E-26 134.9 7.2 73 48-126 5-79 (82)
4 1hdj_A Human HSP40, HDJ-1; mol 99.9 3.5E-22 1.2E-26 134.2 6.1 69 52-126 3-71 (77)
5 1bq0_A DNAJ, HSP40; chaperone, 99.9 2.1E-22 7.1E-27 142.5 5.2 71 52-128 3-74 (103)
6 2cug_A Mkiaa0962 protein; DNAJ 99.9 5.5E-22 1.9E-26 136.7 7.2 72 49-126 14-85 (88)
7 2ctr_A DNAJ homolog subfamily 99.9 2.5E-22 8.7E-27 138.3 4.4 71 48-124 3-73 (88)
8 2dmx_A DNAJ homolog subfamily 99.8 1E-21 3.4E-26 136.2 6.4 76 48-129 5-82 (92)
9 2och_A Hypothetical protein DN 99.8 2.3E-21 8E-26 129.0 6.0 67 50-124 6-72 (73)
10 2ctw_A DNAJ homolog subfamily 99.8 1.2E-21 4.3E-26 140.0 3.3 73 48-126 13-86 (109)
11 1wjz_A 1700030A21RIK protein; 99.8 6.7E-21 2.3E-25 132.3 4.7 72 48-125 12-90 (94)
12 2ctq_A DNAJ homolog subfamily 99.8 1.1E-20 3.7E-25 135.7 4.9 71 49-125 17-88 (112)
13 2lgw_A DNAJ homolog subfamily 99.8 8.8E-21 3E-25 133.6 4.4 71 52-128 2-74 (99)
14 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 6.4E-21 2.2E-25 136.1 3.6 73 48-126 11-88 (109)
15 2yua_A Williams-beuren syndrom 99.8 3.1E-20 1.1E-24 130.5 6.2 69 49-123 14-83 (99)
16 2o37_A Protein SIS1; HSP40, J- 99.8 1.7E-20 5.9E-25 130.2 4.7 67 50-124 6-72 (92)
17 3apq_A DNAJ homolog subfamily 99.8 4.9E-20 1.7E-24 143.2 7.0 88 52-145 2-90 (210)
18 3lz8_A Putative chaperone DNAJ 99.8 3.8E-21 1.3E-25 161.1 0.0 93 49-147 25-127 (329)
19 1gh6_A Large T antigen; tumor 99.8 4E-20 1.4E-24 133.4 4.2 91 51-150 7-106 (114)
20 2ys8_A RAB-related GTP-binding 99.8 2.3E-19 7.8E-24 124.1 5.8 57 51-107 26-82 (90)
21 2l6l_A DNAJ homolog subfamily 99.7 2.7E-18 9.2E-23 129.4 6.3 69 49-123 7-82 (155)
22 3bvo_A CO-chaperone protein HS 99.7 7.1E-18 2.4E-22 133.0 8.1 86 34-125 24-120 (207)
23 1faf_A Large T antigen; J doma 99.7 2.8E-18 9.5E-23 116.1 4.1 67 50-126 9-77 (79)
24 2pf4_E Small T antigen; PP2A, 99.7 9.8E-19 3.3E-23 134.5 1.9 87 50-145 9-104 (174)
25 1iur_A KIAA0730 protein; DNAJ 99.7 3.3E-18 1.1E-22 118.1 3.7 63 46-108 10-74 (88)
26 3hho_A CO-chaperone protein HS 99.7 1.1E-17 3.9E-22 128.5 5.3 66 50-121 2-75 (174)
27 1fpo_A HSC20, chaperone protei 99.7 2.8E-17 9.6E-22 126.0 5.5 67 52-124 1-75 (171)
28 1n4c_A Auxilin; four helix bun 99.7 1.9E-17 6.5E-22 128.0 4.0 62 52-119 117-182 (182)
29 2qwo_B Putative tyrosine-prote 99.7 2E-17 6.8E-22 115.0 3.4 55 52-106 33-91 (92)
30 3apo_A DNAJ homolog subfamily 99.6 1.5E-17 5.2E-22 150.9 -0.9 74 48-127 17-91 (780)
31 3ag7_A Putative uncharacterize 99.6 8E-17 2.7E-21 114.7 2.5 57 50-107 39-103 (106)
32 2guz_A Mitochondrial import in 99.6 1.6E-16 5.5E-21 105.2 3.1 55 50-107 12-67 (71)
33 3uo3_A J-type CO-chaperone JAC 99.6 2.3E-16 7.8E-21 122.0 3.1 66 48-121 7-79 (181)
34 2y4t_A DNAJ homolog subfamily 99.0 1.4E-10 4.6E-15 95.6 4.6 65 51-121 381-449 (450)
35 2guz_B Mitochondrial import in 99.0 1.9E-10 6.5E-15 74.8 3.0 53 52-107 4-59 (65)
36 2pzi_A Probable serine/threoni 91.0 0.15 5.2E-06 45.2 3.6 47 50-103 627-675 (681)
37 1qqr_A Streptokinase domain B; 43.6 13 0.00043 26.8 2.2 32 53-84 33-64 (138)
38 2cqn_A Formin-binding protein 43.5 12 0.00041 24.1 1.9 53 64-122 6-61 (77)
39 2b7e_A PRE-mRNA processing pro 43.4 11 0.00037 23.3 1.6 49 67-122 3-55 (59)
40 1r5q_A KAI A, circadian oscill 33.4 53 0.0018 22.2 3.9 29 66-94 11-39 (102)
41 1v2z_A Circadian clock protein 28.7 56 0.0019 22.5 3.4 29 66-94 18-46 (111)
42 1uzc_A Hypothetical protein FL 25.1 14 0.00048 23.4 -0.2 21 63-83 11-31 (71)
43 4a3n_A Transcription factor SO 20.7 1.2E+02 0.0042 17.9 3.7 34 70-107 14-47 (71)
No 1
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=2e-22 Score=135.73 Aligned_cols=74 Identities=36% Similarity=0.605 Sum_probs=67.9
Q ss_pred CCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCCC
Q 031261 48 SSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGID 127 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~~ 127 (163)
.....|+|+||||+++++.++||++|++|++++|||+++.+.+.+.|++|++||++|+|+ .+|..||.+|....
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~------~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNP------EKRKQYDQFGSGPS 76 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSH------HHHHHHHHTCSCSC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCH------HHHHHHHHcCcccc
Confidence 345689999999999999999999999999999999998777899999999999999999 79999999987543
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=5.2e-22 Score=133.89 Aligned_cols=74 Identities=35% Similarity=0.574 Sum_probs=67.0
Q ss_pred CCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCC
Q 031261 48 SSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRG-NNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGI 126 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~-~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~ 126 (163)
.....|+|+||||+++++.++||++||+|++++|||+++. +.+.++|++|++||++|+|+ .+|..||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~------~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDE------VKRKQYDAYGSGP 76 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSH------HHHHHHHHSCCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCH------HHHHHHHhccCcC
Confidence 3456899999999999999999999999999999999975 45889999999999999999 7999999998754
Q ss_pred C
Q 031261 127 D 127 (163)
Q Consensus 127 ~ 127 (163)
.
T Consensus 77 ~ 77 (79)
T 2dn9_A 77 S 77 (79)
T ss_dssp S
T ss_pred C
Confidence 3
No 3
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=4.8e-22 Score=134.94 Aligned_cols=73 Identities=36% Similarity=0.636 Sum_probs=66.5
Q ss_pred CCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCC
Q 031261 48 SSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGN--NCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGG 125 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~--~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~ 125 (163)
.....|+|+||||+++++.++||++|++|++++|||+++.. .+.++|++|++||++|+|+ .+|..||.+|..
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~------~~R~~YD~~g~~ 78 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDA------KKRDIYDRYGSG 78 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSST------THHHHHHHTCCC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCH------HHHHHHHHcCcc
Confidence 44678999999999999999999999999999999999765 3678999999999999999 799999999865
Q ss_pred C
Q 031261 126 I 126 (163)
Q Consensus 126 ~ 126 (163)
+
T Consensus 79 ~ 79 (82)
T 2ej7_A 79 P 79 (82)
T ss_dssp S
T ss_pred c
Confidence 4
No 4
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.86 E-value=3.5e-22 Score=134.18 Aligned_cols=69 Identities=36% Similarity=0.626 Sum_probs=65.3
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCC
Q 031261 52 MDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGI 126 (163)
Q Consensus 52 ~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~ 126 (163)
.|+|+||||+++++.++||++|++|++++|||+++.+.+.+.|++|++||++|+|+ .+|..||.+|...
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~------~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDP------RKREIFDRYGEEG 71 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCH------HHHHHHHHTCGGG
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCH------HHHHHHHHHcccc
Confidence 58999999999999999999999999999999998888999999999999999999 7999999998644
No 5
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.86 E-value=2.1e-22 Score=142.55 Aligned_cols=71 Identities=32% Similarity=0.644 Sum_probs=65.6
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCCCC
Q 031261 52 MDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRG-NNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGIDE 128 (163)
Q Consensus 52 ~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~-~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~~~ 128 (163)
.|+|+||||+++++.++||++||+|++++|||+++. +.+.++|++|++||++|+|+ .+|..||.++.....
T Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~------~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDS------QKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCS------HHHHHTTTSTTTSSC
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCH------HHHHHHHHHhhhhhc
Confidence 699999999999999999999999999999999985 45889999999999999999 799999999986543
No 6
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=5.5e-22 Score=136.67 Aligned_cols=72 Identities=33% Similarity=0.637 Sum_probs=67.2
Q ss_pred CCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCC
Q 031261 49 SSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGI 126 (163)
Q Consensus 49 ~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~ 126 (163)
....|+|+||||+++++.++||++||+|++++|||+++.+.+.+.|++|++||++|+|+ .+|..||.+|..+
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~------~~R~~YD~~g~~~ 85 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNE------EKRTNYDHYGSGP 85 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSH------HHHHHHHHHTTCC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCH------HHHHHHHHcCCCC
Confidence 35679999999999999999999999999999999998888999999999999999999 7999999998754
No 7
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.5e-22 Score=138.35 Aligned_cols=71 Identities=32% Similarity=0.539 Sum_probs=66.0
Q ss_pred CCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCC
Q 031261 48 SSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDG 124 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~ 124 (163)
.....|+|+||||+++++.++||++||+|++++|||+++.+.+.++|++|++||++|+|+ .+|..||.++.
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~------~~R~~Yd~~~~ 73 (88)
T 2ctr_A 3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDA------NRRKEYDTLGH 73 (88)
T ss_dssp SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSS------HHHHHHHHTCH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCH------HHHHHHHHhCc
Confidence 345689999999999999999999999999999999998767889999999999999999 79999999975
No 8
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=136.23 Aligned_cols=76 Identities=32% Similarity=0.542 Sum_probs=67.9
Q ss_pred CCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCC
Q 031261 48 SSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGN--NCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGG 125 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~--~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~ 125 (163)
.....|+|+||||+++++.++||++|++|++++|||+++.. .++++|++|++||++|+|+ .+|..||.++..
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~------~~R~~Yd~~~~~ 78 (92)
T 2dmx_A 5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDS------KKRSLYDRAGCD 78 (92)
T ss_dssp CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSH------HHHHHHHHHCSC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCH------HHHHHHHHhCcc
Confidence 44678999999999999999999999999999999999765 3788999999999999999 799999999875
Q ss_pred CCCC
Q 031261 126 IDEP 129 (163)
Q Consensus 126 ~~~~ 129 (163)
....
T Consensus 79 ~~~~ 82 (92)
T 2dmx_A 79 SWRA 82 (92)
T ss_dssp SSCC
T ss_pred cccC
Confidence 5443
No 9
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.84 E-value=2.3e-21 Score=128.98 Aligned_cols=67 Identities=30% Similarity=0.552 Sum_probs=61.9
Q ss_pred CcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCC
Q 031261 50 SVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDG 124 (163)
Q Consensus 50 ~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~ 124 (163)
...|+|+||||+++++.++||++|++|++++|||+++.. .+.|++|++||++|+|+ .+|..||.+|+
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~--~~~f~~i~~Ay~~L~d~------~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG--AEQFKQISQAYEVLSDE------KKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC--HHHHHHHHHHHHHHTSH------HHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH--HHHHHHHHHHHHHHCCH------HHHHHHHhcCC
Confidence 567999999999999999999999999999999998754 58999999999999999 79999999985
No 10
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.2e-21 Score=140.02 Aligned_cols=73 Identities=30% Similarity=0.504 Sum_probs=66.1
Q ss_pred CCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCC
Q 031261 48 SSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGN-NCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGI 126 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~-~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~ 126 (163)
.....|+|+||||+++++.++||++||+|++++|||+++.. .+.++|++|++||++|+|+ .+|..||.+|..+
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~------~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDA------TKRNIYDKYGSLG 86 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCH------HHHHHHHHTCHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCH------HHHHHHHHhcccc
Confidence 34568999999999999999999999999999999999754 4789999999999999999 7999999998644
No 11
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.82 E-value=6.7e-21 Score=132.28 Aligned_cols=72 Identities=28% Similarity=0.467 Sum_probs=64.2
Q ss_pred CCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCC-------cHHHHHHHHHHHHHHhcCcCCCCCCchhhhcc
Q 031261 48 SSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGN-------NCGVQFHLINEAYDMVMNNFREEPNEPEIMYQ 120 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~-------~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd 120 (163)
.....|+|+||||+++++.++||++||+|++++|||+++.. .+.++|++|++||++|+|+ .+|..||
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~------~~R~~YD 85 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNE------ETKKKYD 85 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSS------SHHHHHH
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCH------HHHHHHH
Confidence 34568999999999999999999999999999999998742 3678999999999999999 7999999
Q ss_pred CCCCC
Q 031261 121 PYDGG 125 (163)
Q Consensus 121 ~~g~~ 125 (163)
.+...
T Consensus 86 ~~l~~ 90 (94)
T 1wjz_A 86 LQRSG 90 (94)
T ss_dssp HHSCC
T ss_pred HHccC
Confidence 87553
No 12
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.1e-20 Score=135.71 Aligned_cols=71 Identities=21% Similarity=0.316 Sum_probs=65.5
Q ss_pred CCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCC
Q 031261 49 SSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRG-NNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGG 125 (163)
Q Consensus 49 ~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~-~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~ 125 (163)
....|||+||||+++++.++||++||+|++++|||+++. +.+.++|++|++||++|+|+ .+|..||.++..
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~------~~R~~YD~~~~~ 88 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNE------ESRARYDHWRRS 88 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSH------HHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCH------HHHHHHHHhhhh
Confidence 456899999999999999999999999999999999984 56889999999999999999 799999998753
No 13
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=8.8e-21 Score=133.56 Aligned_cols=71 Identities=31% Similarity=0.524 Sum_probs=63.4
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCCCC
Q 031261 52 MDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNN--CGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGIDE 128 (163)
Q Consensus 52 ~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~--a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~~~ 128 (163)
.|||+||||+++++.++||++|++|++++|||+++... +.+.|++|++||++|+|+ .+|..||.+|.....
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~------~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDK------HKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSH------HHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCH------HHHHHHHHhCccccc
Confidence 58999999999999999999999999999999997653 788999999999999999 799999999765433
No 14
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.81 E-value=6.4e-21 Score=136.07 Aligned_cols=73 Identities=25% Similarity=0.420 Sum_probs=65.8
Q ss_pred CCCcCCcccccccCCCC-CHHHHHHHHHHHHHHhCCCCCCC----CcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCC
Q 031261 48 SSSVMDPYKTLRIQRGA-SESEVKKAFRQLALQYHPDVCRG----NNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPY 122 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a-~~~eIk~aYr~l~~~~HPDk~~~----~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~ 122 (163)
.....|+|+||||++++ +.++||++||+|++++|||++++ ..+.+.|++|++||++|+|+ .+|..||.+
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~------~~R~~YD~~ 84 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDD------EAKTNYDYY 84 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSH------HHHHHHHHH
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCH------HHHHHHHHh
Confidence 44578999999999999 99999999999999999999876 34789999999999999999 799999998
Q ss_pred CCCC
Q 031261 123 DGGI 126 (163)
Q Consensus 123 g~~~ 126 (163)
+..+
T Consensus 85 ~~~~ 88 (109)
T 2qsa_A 85 LDHP 88 (109)
T ss_dssp HHCT
T ss_pred ccCc
Confidence 7543
No 15
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=3.1e-20 Score=130.53 Aligned_cols=69 Identities=23% Similarity=0.341 Sum_probs=63.2
Q ss_pred CCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCC
Q 031261 49 SSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRG-NNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYD 123 (163)
Q Consensus 49 ~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~-~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g 123 (163)
....|+|+||||+++++.++||++||+|++++|||+++. +.+.++|++|++||++|+|+ .+|..||.+.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~------~~R~~YD~~l 83 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSA------TLRRKYDRGL 83 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSH------HHHHHHHHTC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCH------HHHHHHHHhc
Confidence 356799999999999999999999999999999999975 45789999999999999999 7999999863
No 16
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.7e-20 Score=130.20 Aligned_cols=67 Identities=31% Similarity=0.571 Sum_probs=62.2
Q ss_pred CcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCC
Q 031261 50 SVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDG 124 (163)
Q Consensus 50 ~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~ 124 (163)
...|+|+||||+++++.++||++|++|++++|||+++.. .++|++|++||++|+|+ .+|..||.++.
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~f~~i~~Ay~~L~d~------~~R~~YD~~~~ 72 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD--TEKFKEISEAFEILNDP------QKREIYDQYGL 72 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC--HHHHHHHHHHHHHHTSH------HHHHHHHHHCH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--HHHHHHHHHHHHHHCCH------HHHHHHHHHCH
Confidence 457999999999999999999999999999999998765 47999999999999999 79999999875
No 17
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.80 E-value=4.9e-20 Score=143.21 Aligned_cols=88 Identities=27% Similarity=0.433 Sum_probs=73.0
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCCCCCC
Q 031261 52 MDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRG-NNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGIDEPF 130 (163)
Q Consensus 52 ~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~-~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~~~~~ 130 (163)
.|||+||||+++++.++||++||+|++++|||+++. +.+.++|++|++||++|+|+ .+|..||.+|.......
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~------~~r~~yd~~~~~~~~~~ 75 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDE------DLRKKYDKYGEKGLEDN 75 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSH------HHHHHHHHHTTTTCCTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCH------HHHHHHHHhcccccccc
Confidence 599999999999999999999999999999999964 45889999999999999999 79999999997654433
Q ss_pred CCCCCcchHHHHHhh
Q 031261 131 RGMNDPDWDLWEEWM 145 (163)
Q Consensus 131 ~~~~~~~~~~~~~~f 145 (163)
.+.....|..|...|
T Consensus 76 ~~~~~~~~~~~~~~f 90 (210)
T 3apq_A 76 QGGQYESWSYYRYDF 90 (210)
T ss_dssp CSCCCCCHHHHHHSS
T ss_pred ccccccccccccccc
Confidence 333333466665544
No 18
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.80 E-value=3.8e-21 Score=161.06 Aligned_cols=93 Identities=25% Similarity=0.416 Sum_probs=0.0
Q ss_pred CCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCC-C
Q 031261 49 SSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGI-D 127 (163)
Q Consensus 49 ~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~-~ 127 (163)
....|||+||||+++|+.++||++||+|++++|||+++.+.++++|++|++||++|+|+ ++|..||.|+... .
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~------~~R~~YD~~~~~~~~ 98 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDE------QRRAEYDQLWQHRND 98 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhh------hhhcccchhhccccC
Confidence 34579999999999999999999999999999999998878899999999999999999 7999999985432 1
Q ss_pred CCC----C----CC-CCcchHHHHHhhcC
Q 031261 128 EPF----R----GM-NDPDWDLWEEWMGW 147 (163)
Q Consensus 128 ~~~----~----~~-~~~~~~~~~~~f~~ 147 (163)
.++ . ++ ..++.++|+.||++
T Consensus 99 ~~~~~~~~~~~~~f~~~~f~diF~~~Fg~ 127 (329)
T 3lz8_A 99 PGFGRQRQTHEQSYSQQDFDDIFSSMFGQ 127 (329)
T ss_dssp -----------------------------
T ss_pred CCcccccccccCCcCCCchhhhhHhhhcC
Confidence 111 1 11 12456889999975
No 19
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.79 E-value=4e-20 Score=133.42 Aligned_cols=91 Identities=16% Similarity=0.237 Sum_probs=73.0
Q ss_pred cCCcccccccCCCCCH--HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCCCC
Q 031261 51 VMDPYKTLRIQRGASE--SEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGIDE 128 (163)
Q Consensus 51 ~~d~Y~iLgv~~~a~~--~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~~~ 128 (163)
..|+|+||||+++++. ++||++||+|++++|||+++. .++|++|++||++|+|+ .+|..||.||.....
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~------~~R~~~~~~~~~w~~ 77 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDG------VKYAHQPDFGGFWDA 77 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHH------HHSCCSSCCSCCCCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCH------HHHHHhhhccccccc
Confidence 4689999999999998 999999999999999999865 38999999999999999 799999999875432
Q ss_pred -CCCCCCCcchH------HHHHhhcCCCC
Q 031261 129 -PFRGMNDPDWD------LWEEWMGWEGA 150 (163)
Q Consensus 129 -~~~~~~~~~~~------~~~~~f~~~~~ 150 (163)
....++.+.|+ .|+.+|..+..
T Consensus 78 ~~~~~~g~p~w~~w~~~~~~~dl~~~~~~ 106 (114)
T 1gh6_A 78 TEIPTYGTDEWEQWWNAFNEENLFCSEEM 106 (114)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHTCCCCCC
T ss_pred ccCCCCCCchHHHHHhccccccccccCCc
Confidence 23345566666 33445554443
No 20
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.3e-19 Score=124.14 Aligned_cols=57 Identities=33% Similarity=0.564 Sum_probs=55.0
Q ss_pred cCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCc
Q 031261 51 VMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNN 107 (163)
Q Consensus 51 ~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~ 107 (163)
..|+|+||||+++++.++||++||+|++++|||+++...+.++|++|++||++|+|+
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~ 82 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKN 82 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCc
Confidence 479999999999999999999999999999999998888999999999999999998
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=2.7e-18 Score=129.36 Aligned_cols=69 Identities=28% Similarity=0.424 Sum_probs=63.0
Q ss_pred CCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-------HHHHHHHHHHHHHHhcCcCCCCCCchhhhccC
Q 031261 49 SSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNN-------CGVQFHLINEAYDMVMNNFREEPNEPEIMYQP 121 (163)
Q Consensus 49 ~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~-------a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~ 121 (163)
....|||+||||+++++.++||++||+|++++|||+++... +.+.|++|++||++|+|| .+|..||.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp------~~R~~Yd~ 80 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNE------ETKREYDL 80 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSH------HHHCHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCH------HHHHHHHH
Confidence 45679999999999999999999999999999999997763 568999999999999999 79999997
Q ss_pred CC
Q 031261 122 YD 123 (163)
Q Consensus 122 ~g 123 (163)
.+
T Consensus 81 ~~ 82 (155)
T 2l6l_A 81 QR 82 (155)
T ss_dssp HH
T ss_pred Hc
Confidence 64
No 22
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.73 E-value=7.1e-18 Score=133.01 Aligned_cols=86 Identities=15% Similarity=0.274 Sum_probs=71.1
Q ss_pred CcceeeecccccC-CCCCcCCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHHHHHHHHh
Q 031261 34 GRVKVICSASYSS-SSSSVMDPYKTLRIQRG--ASESEVKKAFRQLALQYHPDVCRGNN------CGVQFHLINEAYDMV 104 (163)
Q Consensus 34 ~~~~~~~~~~~~~-~~~~~~d~Y~iLgv~~~--a~~~eIk~aYr~l~~~~HPDk~~~~~------a~~~f~~I~~Ay~vL 104 (163)
....++|..+... ++....|||+||||+++ ++..+||++||+|++++|||++++.. +.++|++|++||++|
T Consensus 24 ~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL 103 (207)
T 3bvo_A 24 REDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL 103 (207)
T ss_dssp CSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3456888877643 23347899999999986 78999999999999999999997654 456899999999999
Q ss_pred cCcCCCCCCchhhhccC--CCCC
Q 031261 105 MNNFREEPNEPEIMYQP--YDGG 125 (163)
Q Consensus 105 ~d~~~~~~~~~R~~Yd~--~g~~ 125 (163)
+|| .+|..||. .|..
T Consensus 104 sdp------~~R~~Yd~~l~G~~ 120 (207)
T 3bvo_A 104 LAP------LSRGLYLLKLHGIE 120 (207)
T ss_dssp HSH------HHHHHHHHHHTTCC
T ss_pred CCH------HHHHHHHHHhcCCC
Confidence 999 79999984 5543
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.72 E-value=2.8e-18 Score=116.06 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=58.0
Q ss_pred CcCCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCC
Q 031261 50 SVMDPYKTLRIQRG--ASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGI 126 (163)
Q Consensus 50 ~~~d~Y~iLgv~~~--a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~ 126 (163)
...++|+||||+++ ++.++||++||+|++++|||+++. .++|++|++||++|+|+ .+|.. +.||...
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~------~~r~~-~~~g~~~ 77 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTE------VYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHH------HHHHT-TCCSSCC
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhH------HHHHH-HhcCCcc
Confidence 45789999999999 999999999999999999999743 58999999999999998 46666 5676543
No 24
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.72 E-value=9.8e-19 Score=134.45 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=67.4
Q ss_pred CcCCcccccccCCCCC--HHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCCC
Q 031261 50 SVMDPYKTLRIQRGAS--ESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGID 127 (163)
Q Consensus 50 ~~~d~Y~iLgv~~~a~--~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~~ 127 (163)
...|+|+||||+++++ .++||++||++++++|||++++. ++|++|++||++|+|+ .+|..||.||....
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~---e~F~~I~~AYevLsdp------~kR~~YD~~G~~w~ 79 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDG------VKYAHQPDFGGFWD 79 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC---TTTTHHHHHHHHHHHH------HHHHTSCGGGGCC-
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHhCCH------HHHHHHhccCCccc
Confidence 4579999999999998 69999999999999999998653 7999999999999999 79999999985221
Q ss_pred -------CCCCCCCCcchHHHHHhh
Q 031261 128 -------EPFRGMNDPDWDLWEEWM 145 (163)
Q Consensus 128 -------~~~~~~~~~~~~~~~~~f 145 (163)
+.+.++...+...|..-|
T Consensus 80 ~~~~~~~~~f~~~~~~f~~~w~~c~ 104 (174)
T 2pf4_E 80 ATEVFASSLNPGVDAIYCKQWPECV 104 (174)
T ss_dssp -----CCSSCCCTTCCSCSSHHHHH
T ss_pred ccccchhhhccchHHHHHHhhhHHh
Confidence 112344455556666555
No 25
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.71 E-value=3.3e-18 Score=118.08 Aligned_cols=63 Identities=22% Similarity=0.283 Sum_probs=57.2
Q ss_pred CCCCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHHhcCcC
Q 031261 46 SSSSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNN--CGVQFHLINEAYDMVMNNF 108 (163)
Q Consensus 46 ~~~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~--a~~~f~~I~~Ay~vL~d~~ 108 (163)
.......++|+||||+++++.++||++||+|++++|||+++... ++++|++|++||++|+|..
T Consensus 10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~ 74 (88)
T 1iur_A 10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA 74 (88)
T ss_dssp CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence 34567789999999999999999999999999999999998753 7899999999999999973
No 26
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.70 E-value=1.1e-17 Score=128.55 Aligned_cols=66 Identities=21% Similarity=0.285 Sum_probs=59.7
Q ss_pred CcCCcccccccCCCCC--HHHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHHHHHHHHhcCcCCCCCCchhhhccC
Q 031261 50 SVMDPYKTLRIQRGAS--ESEVKKAFRQLALQYHPDVCRGNN------CGVQFHLINEAYDMVMNNFREEPNEPEIMYQP 121 (163)
Q Consensus 50 ~~~d~Y~iLgv~~~a~--~~eIk~aYr~l~~~~HPDk~~~~~------a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~ 121 (163)
...|||+||||+++++ ..+||++||+|++++|||++++.. +.+.|+.|++||++|+|| .+|..||.
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp------~~R~~Yd~ 75 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDP------LRRAEYLL 75 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSH------HHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCh------HHHHHHHH
Confidence 3569999999999887 999999999999999999998765 568899999999999999 79999996
No 27
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.68 E-value=2.8e-17 Score=126.05 Aligned_cols=67 Identities=21% Similarity=0.236 Sum_probs=60.4
Q ss_pred CCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCC
Q 031261 52 MDPYKTLRIQRGA--SESEVKKAFRQLALQYHPDVCRGNN------CGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYD 123 (163)
Q Consensus 52 ~d~Y~iLgv~~~a--~~~eIk~aYr~l~~~~HPDk~~~~~------a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g 123 (163)
.|||+||||++++ +..+||++||+|++++|||++++.+ +.+.|+.|++||++|+|| .+|..||...
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp------~~R~~Yd~~l 74 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHP------LMRAEYLLSL 74 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSH------HHHHHHHHHT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCc------hHHHHHHHHh
Confidence 3899999999998 9999999999999999999998764 356899999999999999 7999999754
Q ss_pred C
Q 031261 124 G 124 (163)
Q Consensus 124 ~ 124 (163)
.
T Consensus 75 ~ 75 (171)
T 1fpo_A 75 H 75 (171)
T ss_dssp T
T ss_pred c
Confidence 3
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.67 E-value=1.9e-17 Score=128.03 Aligned_cols=62 Identities=24% Similarity=0.421 Sum_probs=57.8
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHHhcCcCCCCCCchhhhc
Q 031261 52 MDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNN----CGVQFHLINEAYDMVMNNFREEPNEPEIMY 119 (163)
Q Consensus 52 ~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~----a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Y 119 (163)
.|+|+||||++.++.++||++||+|++++|||++++.. ++++|++|++||++|+|+ .+|..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~------~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQ------GQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHH------HSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCH------HhhhhC
Confidence 69999999999999999999999999999999998765 788999999999999998 688776
No 29
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.67 E-value=2e-17 Score=115.00 Aligned_cols=55 Identities=24% Similarity=0.373 Sum_probs=51.2
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHHhcC
Q 031261 52 MDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNN----CGVQFHLINEAYDMVMN 106 (163)
Q Consensus 52 ~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~----a~~~f~~I~~Ay~vL~d 106 (163)
.++|++|||++.++.++||++||++++++|||++++.. ++++|+.|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998654 68899999999999976
No 30
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.63 E-value=1.5e-17 Score=150.89 Aligned_cols=74 Identities=28% Similarity=0.433 Sum_probs=40.5
Q ss_pred CCCcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHHhcCcCCCCCCchhhhccCCCCCC
Q 031261 48 SSSVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRG-NNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQPYDGGI 126 (163)
Q Consensus 48 ~~~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~-~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~g~~~ 126 (163)
.....|||+||||+++++.++||++||+|++++|||+++. +.+.++|++|++||++|+|+ .+|..||.||...
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~------~~r~~yd~~~~~~ 90 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDE------DLRKKYDKYGEKG 90 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSH------HHHHHHTTC----
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcCh------HHHHHHHhhcccc
Confidence 4466899999999999999999999999999999999864 45789999999999999999 7999999998755
Q ss_pred C
Q 031261 127 D 127 (163)
Q Consensus 127 ~ 127 (163)
.
T Consensus 91 ~ 91 (780)
T 3apo_A 91 L 91 (780)
T ss_dssp -
T ss_pred c
Confidence 3
No 31
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.62 E-value=8e-17 Score=114.66 Aligned_cols=57 Identities=21% Similarity=0.232 Sum_probs=51.1
Q ss_pred CcCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCC--------cHHHHHHHHHHHHHHhcCc
Q 031261 50 SVMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGN--------NCGVQFHLINEAYDMVMNN 107 (163)
Q Consensus 50 ~~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~--------~a~~~f~~I~~Ay~vL~d~ 107 (163)
...|||+|||++. ++.++||++||++++++|||+++.. .++++|++|++||++|+|+
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~ 103 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTL 103 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCc
Confidence 3479999999996 9999999999999999999998642 2578999999999999997
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.6e-16 Score=105.21 Aligned_cols=55 Identities=22% Similarity=0.324 Sum_probs=50.0
Q ss_pred CcCCcccccccCC-CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCc
Q 031261 50 SVMDPYKTLRIQR-GASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNN 107 (163)
Q Consensus 50 ~~~d~Y~iLgv~~-~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~ 107 (163)
...++|+||||++ +++.++||++||+|++++|||++. ..+.|++|++||++|+++
T Consensus 12 ~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g---~~~~f~~i~~Aye~L~~~ 67 (71)
T 2guz_A 12 NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG---SPFLATKINEAKDFLEKR 67 (71)
T ss_dssp CHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC---CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC---CHHHHHHHHHHHHHHhhh
Confidence 4579999999999 799999999999999999999953 347999999999999997
No 33
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.60 E-value=2.3e-16 Score=122.03 Aligned_cols=66 Identities=23% Similarity=0.328 Sum_probs=59.3
Q ss_pred CCCcCCccccc------ccCC-CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCcCCCCCCchhhhcc
Q 031261 48 SSSVMDPYKTL------RIQR-GASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNNFREEPNEPEIMYQ 120 (163)
Q Consensus 48 ~~~~~d~Y~iL------gv~~-~a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd 120 (163)
.....|||+|| |+.+ +++..+||++||+|++++|||+++. +.+.|++|++||++|+|| .+|..||
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp------~~R~~Yd 78 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDP------LRRSQYM 78 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSH------HHHHHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcCh------HHHHHHH
Confidence 44568999999 4654 8999999999999999999999876 568999999999999999 7999999
Q ss_pred C
Q 031261 121 P 121 (163)
Q Consensus 121 ~ 121 (163)
.
T Consensus 79 ~ 79 (181)
T 3uo3_A 79 L 79 (181)
T ss_dssp H
T ss_pred H
Confidence 8
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.03 E-value=1.4e-10 Score=95.63 Aligned_cols=65 Identities=32% Similarity=0.496 Sum_probs=55.5
Q ss_pred cCCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHHhcCcCCCCCCchhhhccC
Q 031261 51 VMDPYKTLRIQRGASESEVKKAFRQLALQYHPDVCRGNN----CGVQFHLINEAYDMVMNNFREEPNEPEIMYQP 121 (163)
Q Consensus 51 ~~d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~----a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~ 121 (163)
..++|++||+...++.++|+++|+++++++|||+.+.+. +.++|+.|++||++|+|+ ++|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~------~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP------EMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGG------GGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCH------HHHHhccC
Confidence 348999999999999999999999999999999987654 788999999999999999 89999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.99 E-value=1.9e-10 Score=74.76 Aligned_cols=53 Identities=11% Similarity=0.031 Sum_probs=46.2
Q ss_pred CCcccccccCCC---CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCc
Q 031261 52 MDPYKTLRIQRG---ASESEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNN 107 (163)
Q Consensus 52 ~d~Y~iLgv~~~---a~~~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~ 107 (163)
.+.|+||||+++ ++.++|+++||+|....|||+... .-...+|++|+++|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS---~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS---FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHHHHH
Confidence 467999999999 999999999999999999999633 36778899999998654
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.98 E-value=0.15 Score=45.20 Aligned_cols=47 Identities=15% Similarity=0.149 Sum_probs=37.0
Q ss_pred CcCCcccccccCCCCCH--HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHH
Q 031261 50 SVMDPYKTLRIQRGASE--SEVKKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDM 103 (163)
Q Consensus 50 ~~~d~Y~iLgv~~~a~~--~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~v 103 (163)
...|+|++||++..... .+|+++||++++..+++ .+++..|..|..|
T Consensus 627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 44569999999666544 67999999999976655 3788889988876
No 37
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=43.65 E-value=13 Score=26.85 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=27.8
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHHHhCCCC
Q 031261 53 DPYKTLRIQRGASESEVKKAFRQLALQYHPDV 84 (163)
Q Consensus 53 d~Y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk 84 (163)
-++.+|-|....+.+||+++=..+..++|||-
T Consensus 33 ~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 33 KLLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 34677788888999999999999999999994
No 38
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=43.48 E-value=12 Score=24.13 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHHHHHhcCcCCCCCCchhhhccCC
Q 031261 64 ASESEVKKAFRQLALQYHPDVCRGNN---CGVQFHLINEAYDMVMNNFREEPNEPEIMYQPY 122 (163)
Q Consensus 64 a~~~eIk~aYr~l~~~~HPDk~~~~~---a~~~f~~I~~Ay~vL~d~~~~~~~~~R~~Yd~~ 122 (163)
.-...++..++.+.+...|....... +..+|.... +|..|.+.- +++.+|+.|
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~-----eR~~lFeeY 61 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLES-----ERKRIFKDF 61 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHH-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHH-----HHHHHHHHH
Confidence 34667899999999999888766554 344444433 788777652 455665544
No 39
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=43.41 E-value=11 Score=23.28 Aligned_cols=49 Identities=18% Similarity=0.215 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH---HHHHHHhcC-cCCCCCCchhhhccCC
Q 031261 67 SEVKKAFRQLALQYHPDVCRGNNCGVQFHLI---NEAYDMVMN-NFREEPNEPEIMYQPY 122 (163)
Q Consensus 67 ~eIk~aYr~l~~~~HPDk~~~~~a~~~f~~I---~~Ay~vL~d-~~~~~~~~~R~~Yd~~ 122 (163)
+|..++|.+|.+...=| +.=.=+..++.| ..-|.+|.| +. +++++|+.|
T Consensus 3 eEae~aF~~lL~~~~V~--s~wsweqamr~i~i~DPrY~al~d~~~-----eRK~~Fe~Y 55 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVD--STWSFSRIISELGTRDPRYWMVDDDPL-----WKKEMFEKY 55 (59)
T ss_dssp THHHHHHHHHHHHTTCC--SSCCHHHHHHHHHHHCTHHHHSCCCHH-----HHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCC--CCCcHHHHHHHhccCCCccccccCCHH-----HHHHHHHHH
Confidence 57789999999987444 222334555556 347889996 64 677888766
No 40
>1r5q_A KAI A, circadian oscillation regulator; four-helix-bundle, gene regulation; 2.00A {Nostoc SP} SCOP: a.186.1.1
Probab=33.40 E-value=53 Score=22.20 Aligned_cols=29 Identities=21% Similarity=0.224 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCcHHHHH
Q 031261 66 ESEVKKAFRQLALQYHPDVCRGNNCGVQF 94 (163)
Q Consensus 66 ~~eIk~aYr~l~~~~HPDk~~~~~a~~~f 94 (163)
.+++|..||.+++.|--+-...+.+-+.|
T Consensus 11 l~~L~~~YR~ill~YF~~d~~~n~~Id~f 39 (102)
T 1r5q_A 11 LQQLKSDYRQILLSYFTTDKALKEKIDKF 39 (102)
T ss_dssp HHHHHHHHHHHHHHTTSCC--CHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 36799999999999977654444444444
No 41
>1v2z_A Circadian clock protein KAIA homolog; all alpha, riken structural genomics/proteomics initiative, structural genomics; 1.80A {Thermosynechococcus elongatus} SCOP: a.186.1.1 PDB: 1q6a_A 1q6b_A 1suy_A 1sv1_A
Probab=28.66 E-value=56 Score=22.45 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCcHHHHH
Q 031261 66 ESEVKKAFRQLALQYHPDVCRGNNCGVQF 94 (163)
Q Consensus 66 ~~eIk~aYr~l~~~~HPDk~~~~~a~~~f 94 (163)
.++++..||.+++.|--+-...+.+-+.|
T Consensus 18 l~~L~~~YR~ill~YF~~d~~~nq~Id~F 46 (111)
T 1v2z_A 18 LDELRSIYRTIVLEYFNTDAKVNERIDEF 46 (111)
T ss_dssp HHHHHHHHHHHHHHTTCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 46799999999999977644433333444
No 42
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=25.10 E-value=14 Score=23.45 Aligned_cols=21 Identities=24% Similarity=0.306 Sum_probs=17.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCC
Q 031261 63 GASESEVKKAFRQLALQYHPD 83 (163)
Q Consensus 63 ~a~~~eIk~aYr~l~~~~HPD 83 (163)
-++.++.+.+|++|....+-+
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~ 31 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVP 31 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHcCcC
Confidence 368999999999999988543
No 43
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=20.65 E-value=1.2e+02 Score=17.88 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHhcCc
Q 031261 70 KKAFRQLALQYHPDVCRGNNCGVQFHLINEAYDMVMNN 107 (163)
Q Consensus 70 k~aYr~l~~~~HPDk~~~~~a~~~f~~I~~Ay~vL~d~ 107 (163)
.+.+|..++.-||+.. ..+..+.|-+.|..|++.
T Consensus 14 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~~ 47 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH----NAELSKMLGKSWKALTLA 47 (71)
T ss_dssp HHHHHHHHHTTCTTSC----HHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhcCCHH
Confidence 4566777888888854 457888899999998885
Done!