Query 031264
Match_columns 162
No_of_seqs 194 out of 449
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 18:35:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 99.9 3.4E-23 1.1E-27 187.6 11.2 99 51-160 45-146 (553)
2 1jgt_A Beta-lactam synthetase; 99.9 3.3E-22 1.1E-26 179.7 9.5 83 69-160 57-144 (513)
3 1q15_A CARA; CMPR, (2S,5S)-5-c 99.8 1.5E-20 5E-25 168.4 10.1 98 48-160 27-128 (503)
4 1xff_A D-fructose-6-, glucosam 99.8 1.3E-19 4.6E-24 147.4 10.9 104 49-159 67-178 (240)
5 1ao0_A Glutamine phosphoribosy 99.8 4.8E-19 1.7E-23 156.6 9.6 91 68-160 83-181 (459)
6 2bpl_A Glucosamine--fructose-6 99.7 1.7E-17 5.7E-22 150.9 10.6 104 49-159 67-178 (608)
7 1ecf_A Glutamine phosphoribosy 99.7 4.2E-17 1.4E-21 146.1 11.7 92 68-160 84-191 (504)
8 3mdn_A Glutamine aminotransfer 99.6 1.7E-15 5.9E-20 127.1 7.3 105 48-159 82-210 (274)
9 1te5_A Conserved hypothetical 98.5 4E-08 1.4E-12 81.2 3.6 107 48-159 72-202 (257)
10 1ea0_A Glutamate synthase [NAD 97.9 2.7E-05 9.4E-10 78.5 9.6 121 28-159 182-353 (1479)
11 1ofd_A Ferredoxin-dependent gl 97.8 7.5E-05 2.6E-09 75.6 9.9 77 81-159 224-352 (1520)
12 4afx_B Protein Z dependent pro 77.8 2.6 9.1E-05 24.9 3.5 22 130-151 7-29 (36)
13 1hle_B Horse leukocyte elastas 74.2 4 0.00014 23.2 3.5 21 131-151 6-27 (31)
14 2h4p_B MENT, heterochromatin-a 73.7 4 0.00014 23.6 3.5 21 131-151 7-28 (34)
15 2xn6_B Thyroxine-binding globu 73.6 4 0.00014 23.9 3.5 21 131-151 7-28 (35)
16 1as4_B Antichymotrypsin, ACT; 72.5 2.4 8.3E-05 25.2 2.3 21 131-151 9-30 (37)
17 2riv_B Thyroxine-binding globu 71.4 4.7 0.00016 24.3 3.5 22 130-151 11-33 (40)
18 3ndd_B Alpha-1-antitrypsin; se 68.7 6.1 0.00021 23.3 3.5 22 130-151 7-29 (36)
19 3f02_C Neuroserpin; cleaved fo 65.7 6 0.0002 24.9 3.2 22 130-151 9-31 (48)
20 3cjm_A Putative beta-lactamase 52.4 28 0.00096 28.2 5.9 37 125-162 42-78 (282)
21 1m93_C Serine proteinase inhib 51.7 17 0.00059 21.9 3.5 22 130-151 13-34 (41)
22 1o7e_A L2 beta lactamase; hydr 50.8 13 0.00046 29.0 3.6 37 125-162 21-57 (276)
23 3dw0_A Class A carbapenemase K 48.2 15 0.00051 30.1 3.6 36 126-162 35-70 (294)
24 3qhy_A Beta-lactamase; enyzme- 45.8 18 0.00061 29.3 3.7 36 126-162 20-55 (271)
25 2qpn_A Beta-lactamase GES-1; A 44.1 19 0.00066 28.3 3.6 36 126-162 30-65 (287)
26 1w7f_A Beta-lactamase; hydrola 44.0 19 0.00066 28.9 3.6 36 126-162 52-87 (307)
27 1alq_A CP254 beta-lactamase; h 42.2 21 0.00073 28.6 3.6 37 125-162 50-86 (266)
28 4au2_A HSP47, serpin peptidase 37.0 29 0.001 29.4 3.9 28 130-157 349-379 (392)
29 1mtp_B Serine proteinase inhib 34.8 34 0.0011 20.9 2.9 21 130-151 12-32 (43)
30 2x9a_A Attachment protein G3P; 31.6 25 0.00086 24.0 2.0 18 73-90 21-38 (65)
31 2cpd_A Apobec-1 stimulating pr 31.2 38 0.0013 22.2 2.9 40 98-143 22-61 (99)
32 3dy0_B C-terminus plasma serin 31.0 43 0.0015 18.6 2.7 19 131-151 7-25 (29)
33 1x3x_A Cytochrome B5; hemoprot 30.9 19 0.00065 24.3 1.3 23 74-96 15-37 (82)
34 3p09_A Beta-lactamase; structu 30.6 21 0.00073 29.1 1.9 36 126-162 30-65 (290)
35 3lf5_A Cytochrome B5 reductase 30.0 20 0.00068 24.8 1.3 23 74-96 17-39 (88)
36 1hko_A Cytochrome B5; electron 29.5 27 0.00094 24.9 2.1 22 75-96 21-42 (104)
37 2dgu_A Heterogeneous nuclear r 29.2 37 0.0013 22.5 2.6 38 98-143 18-55 (103)
38 2ibj_A Cytochrome B5, CYTB5; F 28.8 21 0.00071 24.4 1.3 22 75-96 19-40 (88)
39 3ner_A Cytochrome B5 type B; h 28.4 22 0.00075 24.8 1.3 23 74-96 21-43 (92)
40 2pef_A Serine protease inhibit 27.8 46 0.0016 28.0 3.5 21 131-151 347-368 (373)
41 3d2w_A TAR DNA-binding protein 26.6 47 0.0016 21.8 2.8 41 98-143 18-58 (89)
42 1cxy_A Cytochrome B5; helix, b 26.5 25 0.00085 24.2 1.3 23 74-96 19-41 (90)
43 4dy0_A GLIA-derived nexin; ser 25.9 52 0.0018 27.7 3.5 22 130-151 353-375 (379)
44 4eo1_A Attachment protein G3P; 25.7 41 0.0014 23.2 2.2 20 72-91 23-43 (70)
45 1cyo_A Cytochrome B5; electron 25.4 31 0.0011 23.9 1.7 22 74-95 16-37 (93)
46 2j9o_A TLL2115 protein; penici 24.8 85 0.0029 24.9 4.4 36 126-162 26-62 (298)
47 4hes_A Beta-lactamase class A- 23.8 68 0.0023 25.1 3.6 37 126-162 19-60 (275)
48 2keo_A Probable E3 ubiquitin-p 23.6 42 0.0014 24.4 2.2 21 76-96 37-57 (112)
49 2ivf_C Ethylbenzene dehydrogen 23.3 30 0.001 28.0 1.4 20 134-159 184-203 (214)
50 2xep_A ORF12; hydrolase; 1.50A 21.9 72 0.0024 28.0 3.7 37 126-162 136-174 (458)
51 1j03_A Putative steroid bindin 21.3 37 0.0013 24.1 1.5 20 78-97 21-40 (102)
52 2oay_A C1-inhibitor, plasma pr 20.8 74 0.0025 26.9 3.5 20 132-151 364-384 (390)
53 3f5n_A Neuroserpin; cleaved fo 20.5 68 0.0023 27.4 3.2 22 130-151 368-390 (407)
54 2dgt_A RNA-binding protein 30; 20.0 1.1E+02 0.0037 19.5 3.5 37 99-143 18-54 (92)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=99.89 E-value=3.4e-23 Score=187.61 Aligned_cols=99 Identities=19% Similarity=0.324 Sum_probs=83.9
Q ss_pred eCCceeEEeeCCCCCCCCCcceeecCCcEEEEEcceecCHHHHHHHhC--C-CCCCchHHHHHHHHHHhHhcCCCchhhh
Q 031264 51 FGNAAALAYVPPENPNSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQYG--L-SKGSNEAMFVIEAYRTLRDRGPYPAHQV 127 (162)
Q Consensus 51 ~g~~~~lAys~~~~~~~~~~~~f~~~~~i~~vFNGeIyN~~eLr~q~G--~-~ks~sE~eviieaY~~~~drGpyp~~~~ 127 (162)
+|+ .+||..... .-.||+.+..++++++|||||||+.+||+++. + .+|.||+|||+++|++| | .++
T Consensus 45 lgh-~Rlsi~~~~---~~~QP~~~~~~~~~lv~NGeIyN~~eLr~~L~~~~~f~s~sDtEvil~l~~~~---g----~~~ 113 (553)
T 1ct9_A 45 LAH-ERLSIVDVN---AGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEK---G----PEF 113 (553)
T ss_dssp EEE-EECCCSCTT---TCCSSEECTTSCEEEEEEEEETTHHHHHHHHTTTSCCCSCCTTHHHHHHHHHH---T----TTT
T ss_pred EEE-EeeeeeCCC---CCCCCeEeCCCCEEEEEEEEEECHHHHHHHHhccCccCCCCcHHHHHHHHHHH---H----HHH
Confidence 444 556655543 23688888888999999999999999999984 2 47889999999999986 5 479
Q ss_pred hhccCccEEEEEEECCCCeEEEEecCCCccccc
Q 031264 128 LRDLDGSFGFVLYDCKAGTIFAALASPLNSFVF 160 (162)
Q Consensus 128 l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~ 160 (162)
+++|+|||||+|||+++++|++|||++|+|+++
T Consensus 114 l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy 146 (553)
T 1ct9_A 114 LDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLY 146 (553)
T ss_dssp GGGCCEEEEEEEEETTTTEEEEEECTTCCSCCE
T ss_pred HHhCCccEEEEEEECCCCEEEEEECCCCCCCeE
Confidence 999999999999999999999999999999974
No 2
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.86 E-value=3.3e-22 Score=179.67 Aligned_cols=83 Identities=12% Similarity=0.139 Sum_probs=72.5
Q ss_pred CcceeecC----CcEEEEEcceecCHHHHHHHhCC-CCCCchHHHHHHHHHHhHhcCCCchhhhhhccCccEEEEEEECC
Q 031264 69 SQRWFCGL----HNVYCMFMGSLNNLSSLNKQYGL-SKGSNEAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCK 143 (162)
Q Consensus 69 ~~~~f~~~----~~i~~vFNGeIyN~~eLr~q~G~-~ks~sE~eviieaY~~~~drGpyp~~~~l~~L~GmFAF~iyD~~ 143 (162)
.||+.... ++++++|||||||+.|||+++++ .+|.||+|||+++|++|| .+++++|+|||||+|||.+
T Consensus 57 ~QP~~~~~Pf~~~~~~lv~NGeIyN~~eLr~~L~~~f~t~sDtEvil~l~~~~g-------~~~~~~l~G~fA~~i~d~~ 129 (513)
T 1jgt_A 57 APDRAVARSLTGAPTTAVLAGEIYNRDELLSVLPAGPAPEGDAELVLRLLERYD-------LHAFRLVNGRFATVVRTGD 129 (513)
T ss_dssp CGGGGEEEECSSSSEEEEEEEEESCHHHHHHTSCSSCCCSSHHHHHHHHHHHHG-------GGGGGTCCEEEEEEEEETT
T ss_pred CCCcccCCcCCCCCEEEEEEEEEeCHHHHHHHhCCCCCCCCHHHHHHHHHHHHh-------HHhHhhcCeeEEEEEEECC
Confidence 35554443 68999999999999999999864 489999999999999864 4799999999999999987
Q ss_pred CCeEEEEecCCCccccc
Q 031264 144 AGTIFAALASPLNSFVF 160 (162)
Q Consensus 144 ~~~lflARD~~G~k~~~ 160 (162)
+ |++|||++|+|+++
T Consensus 130 ~--l~~aRD~~G~kPLy 144 (513)
T 1jgt_A 130 R--VLLATDHAGSVPLY 144 (513)
T ss_dssp E--EEEEECTTCCSCCE
T ss_pred E--EEEEECCCCCceeE
Confidence 6 99999999999874
No 3
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.83 E-value=1.5e-20 Score=168.43 Aligned_cols=98 Identities=21% Similarity=0.196 Sum_probs=84.1
Q ss_pred EEEeCCceeEEeeCCCCCCCCCcceeecCCcEEEEEcceecCHH---HHHHHh-CCCCCCchHHHHHHHHHHhHhcCCCc
Q 031264 48 SINFGNAAALAYVPPENPNSVSQRWFCGLHNVYCMFMGSLNNLS---SLNKQY-GLSKGSNEAMFVIEAYRTLRDRGPYP 123 (162)
Q Consensus 48 s~~~g~~~~lAys~~~~~~~~~~~~f~~~~~i~~vFNGeIyN~~---eLr~q~-G~~ks~sE~eviieaY~~~~drGpyp 123 (162)
.+.+|| .++|.... .+ .||+++..++++++ |||||+. |||++| |..++.||+|||+++|++| |
T Consensus 27 ~~~igh-~R~~t~~~-~~---~QP~~~~~~~~~l~--GeI~N~~~~~eLr~~l~g~f~s~sDtEvil~l~~~~---g--- 93 (503)
T 1q15_A 27 GEALSN-GYLFIEQN-GH---YQKCEMERGTAYLI--GSLYNRTFLIGLAGVWEGEAYLANDAELLALLFTRL---G--- 93 (503)
T ss_dssp EEEETT-EEEEEETT-CC---EEEEECSSSEEEEE--ECCSCHHHHHHHHTTTCGGGGGCCHHHHHHHHHHHH---C---
T ss_pred ceeEee-eeEEEcCC-CC---CCCcCcCCCeEEEE--EEEeCCCChHHHHHHhhCCCCCCChHHHHHHHHHHH---H---
Confidence 578888 88988743 33 58888877778777 9999999 999998 4347899999999999986 5
Q ss_pred hhhhhhccCccEEEEEEECCCCeEEEEecCCCccccc
Q 031264 124 AHQVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVF 160 (162)
Q Consensus 124 ~~~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~ 160 (162)
.+++++|+|||||+|||+.++ |++|||++|+|+++
T Consensus 94 -~~~l~~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~ 128 (503)
T 1q15_A 94 -ANALALAEGDFCFFIDEPNGE-LTVITESRGFSPVH 128 (503)
T ss_dssp -GGGGGGCCSSEEEEEECTTSC-EEEEECSSSSSCCE
T ss_pred -HHHHHHcCEEEEEEEEeCCCC-EEEEECCCCCeeEE
Confidence 479999999999999999999 99999999999874
No 4
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=99.81 E-value=1.3e-19 Score=147.40 Aligned_cols=104 Identities=14% Similarity=0.209 Sum_probs=78.8
Q ss_pred EEeCCceeEEeeCCCCCCCCCcceeecCCcEEEEEcceecCHHHHHHHh---CC-CCCCchHHHHHHHHHHhHhcCCCch
Q 031264 49 INFGNAAALAYVPPENPNSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQY---GL-SKGSNEAMFVIEAYRTLRDRGPYPA 124 (162)
Q Consensus 49 ~~~g~~~~lAys~~~~~~~~~~~~f~~~~~i~~vFNGeIyN~~eLr~q~---G~-~ks~sE~eviieaY~~~~drGpyp~ 124 (162)
+-+|| .++|....... ...||+.. +++++++||||||+.+||+++ |+ .++.||+|+|+++|+.+++.|+-+.
T Consensus 67 ~~igH-~R~at~g~~~~-~n~qP~~~--~~~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEvi~~l~~~~~~~g~~~~ 142 (240)
T 1xff_A 67 TGIAH-TRWATHGEPSE-VNAHPHVS--EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLR 142 (240)
T ss_dssp EEEEE-EECCSSSCSST-TTSSCEEE--TTEEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHHHHHHHHHHHHTSSCHH
T ss_pred EEEEE-EeccCCCCCCc-ccCCCccc--CCEEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCHH
Confidence 34444 44554432212 23566665 789999999999999999997 65 4889999999999999865453211
Q ss_pred ---hhhhhccCccEEEEEEECC-CCeEEEEecCCCcccc
Q 031264 125 ---HQVLRDLDGSFGFVLYDCK-AGTIFAALASPLNSFV 159 (162)
Q Consensus 125 ---~~~l~~L~GmFAF~iyD~~-~~~lflARD~~G~k~~ 159 (162)
.+++++|+|||||+|||.+ .++||+|||+ |++
T Consensus 143 ~ai~~~~~~l~G~fa~~i~d~~~~~~l~~~Rd~---~PL 178 (240)
T 1xff_A 143 EAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSG---SPL 178 (240)
T ss_dssp HHHHHHGGGCCEEEEEEEEETTCTTCEEEEEEB---SCC
T ss_pred HHHHHHHHhcccceEEEEEecCCCCEEEEEECC---Cce
Confidence 1699999999999999986 6899999998 664
No 5
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.78 E-value=4.8e-19 Score=156.62 Aligned_cols=91 Identities=15% Similarity=0.131 Sum_probs=74.0
Q ss_pred CCcceee---cCCcEEEEEcceecCHHHHHHHh---CC-CCCCchHHHHHHHHHHhHhcCCCc-hhhhhhccCccEEEEE
Q 031264 68 VSQRWFC---GLHNVYCMFMGSLNNLSSLNKQY---GL-SKGSNEAMFVIEAYRTLRDRGPYP-AHQVLRDLDGSFGFVL 139 (162)
Q Consensus 68 ~~~~~f~---~~~~i~~vFNGeIyN~~eLr~q~---G~-~ks~sE~eviieaY~~~~drGpyp-~~~~l~~L~GmFAF~i 139 (162)
..||+.. ..+++++++||+|||+.+||+++ |+ .+++||+|+|+++|.+|++..+.. ..+++++|+|||||+|
T Consensus 83 n~qP~~~~~~~~g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEvi~~l~~~~~~~~~~~a~~~~~~~l~G~fa~~i 162 (459)
T 1ao0_A 83 NVQPLLFRSQNNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIKRSGHFTLKDQIKNSLSMLKGAYAFLI 162 (459)
T ss_dssp GSSSEEEBCTTTCCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHHHHHHHHTCCCSSHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCceeccCCCCcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHhhccceEEEE
Confidence 3567665 45789999999999999999997 65 589999999999998763111000 0369999999999999
Q ss_pred EECCCCeEEEEecCCCccccc
Q 031264 140 YDCKAGTIFAALASPLNSFVF 160 (162)
Q Consensus 140 yD~~~~~lflARD~~G~k~~~ 160 (162)
|| .++|+++||++|+|++.
T Consensus 163 ~d--~~~l~~~RD~~G~rPL~ 181 (459)
T 1ao0_A 163 MT--ETEMIVALDPNGLRPLS 181 (459)
T ss_dssp EC--SSEEEEEECTTCCSCCE
T ss_pred Ee--CCEEEEEECCCCCCCeE
Confidence 99 48999999999999874
No 6
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.72 E-value=1.7e-17 Score=150.91 Aligned_cols=104 Identities=14% Similarity=0.206 Sum_probs=80.5
Q ss_pred EEeCCceeEEeeCCCCCCCCCcceeecCCcEEEEEcceecCHHHHHHHh---CC-CCCCchHHHHHHHHHHhHhcCCCch
Q 031264 49 INFGNAAALAYVPPENPNSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQY---GL-SKGSNEAMFVIEAYRTLRDRGPYPA 124 (162)
Q Consensus 49 ~~~g~~~~lAys~~~~~~~~~~~~f~~~~~i~~vFNGeIyN~~eLr~q~---G~-~ks~sE~eviieaY~~~~drGpyp~ 124 (162)
+-+|| .++|....... ...||+.. +++++++||+|||+.+||+++ |+ .+++||+|||+++|+.|.++|+-+.
T Consensus 67 ~~igH-~R~at~g~~~~-~n~qP~~~--~~~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEvi~~l~~~~~~~g~~~~ 142 (608)
T 2bpl_A 67 TGIAH-TRWATHGEPSE-VNAHPHVS--EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLR 142 (608)
T ss_dssp EEEEE-EECCCSSSCCG-GGCSCEEE--TTEEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHHHHHHHHHHHTTCCCHH
T ss_pred EEEEE-EccCCCCCCCc-cCCCCccC--CCEEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhcCCCHH
Confidence 44555 55554432211 23566666 789999999999999999997 66 4899999999999998755574111
Q ss_pred ---hhhhhccCccEEEEEEECCC-CeEEEEecCCCcccc
Q 031264 125 ---HQVLRDLDGSFGFVLYDCKA-GTIFAALASPLNSFV 159 (162)
Q Consensus 125 ---~~~l~~L~GmFAF~iyD~~~-~~lflARD~~G~k~~ 159 (162)
.+++++|+|||||++||..+ ++|++|||+ |++
T Consensus 143 ~av~~~~~~l~G~fa~~i~d~~~~~~l~~aRd~---~PL 178 (608)
T 2bpl_A 143 EAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSG---SPL 178 (608)
T ss_dssp HHHHHHGGGCCSSEEEEEEETTCTTCEEEEEEB---SCC
T ss_pred HHHHHHHHhhcCceEEEEEecCCCCEEEEEECC---Cce
Confidence 15899999999999999998 999999997 664
No 7
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.71 E-value=4.2e-17 Score=146.10 Aligned_cols=92 Identities=12% Similarity=0.097 Sum_probs=72.9
Q ss_pred CCcceeec-CCcEEEEEcceecCHHHHHHHh---C-C-CCCCchHHHHHHHHHHhHh-cCC---Cchh------hhhhcc
Q 031264 68 VSQRWFCG-LHNVYCMFMGSLNNLSSLNKQY---G-L-SKGSNEAMFVIEAYRTLRD-RGP---YPAH------QVLRDL 131 (162)
Q Consensus 68 ~~~~~f~~-~~~i~~vFNGeIyN~~eLr~q~---G-~-~ks~sE~eviieaY~~~~d-rGp---yp~~------~~l~~L 131 (162)
..||++.. ..++++++||+|||+.+||+++ | . .+++||+|||+++|.++.+ +|+ .+.+ +++++|
T Consensus 84 n~QP~~~~~~~~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEvi~~l~~~~~~~~g~~~~~~~~~~~a~~~~~~~l 163 (504)
T 1ecf_A 84 EAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLI 163 (504)
T ss_dssp CCSCEEECSSSCEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHTTCCSSSCCHHHHHHHHHHHHHHC
T ss_pred ccCCeEeccCCCEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHhccccccccccHHHHHHHhhhhc
Confidence 35666643 3569999999999999999987 2 3 5899999999999987643 342 1111 579999
Q ss_pred CccEEEEEEECCCCeEEEEecCCCccccc
Q 031264 132 DGSFGFVLYDCKAGTIFAALASPLNSFVF 160 (162)
Q Consensus 132 ~GmFAF~iyD~~~~~lflARD~~G~k~~~ 160 (162)
+|+|||++||.. ++||++||++|+||+.
T Consensus 164 ~G~fa~v~~~~~-~~l~a~RD~~GirPL~ 191 (504)
T 1ecf_A 164 RGAYACVAMIIG-HGMVAFRDPNGIRPLV 191 (504)
T ss_dssp CEEEEEEEEETT-TEEEEEECTTCCSCCE
T ss_pred CccceEEEEEcC-CeEEEEECCCCCCceE
Confidence 999999999864 4799999999999974
No 8
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.58 E-value=1.7e-15 Score=127.14 Aligned_cols=105 Identities=14% Similarity=0.099 Sum_probs=73.4
Q ss_pred EEEeCCceeEEeeCCCCCCCCCcceeecCCcEEEEEcceecCHHHHHHHh---CC------CCCCchHHHHHHHHHHhHh
Q 031264 48 SINFGNAAALAYVPPENPNSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQY---GL------SKGSNEAMFVIEAYRTLRD 118 (162)
Q Consensus 48 s~~~g~~~~lAys~~~~~~~~~~~~f~~~~~i~~vFNGeIyN~~eLr~q~---G~------~ks~sE~eviieaY~~~~d 118 (162)
.+-+|+ .++|....... ...||+.. +++.+++||+|||+.+||+++ |. .+++||+|+|+++|.+++.
T Consensus 82 ~~~igH-vR~AT~g~~s~-~n~qPf~~--g~~~~~HNG~I~N~~~Lr~~L~~~g~~~~f~~~~~~TDSEvi~~l~~~~~~ 157 (274)
T 3mdn_A 82 GLFLSH-VRASTGSCISR-NNCHPFAA--RRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVLFLLALSEGL 157 (274)
T ss_dssp EEEEEE-C-------------CCCEEE--TTEEEEEEEEETTGGGGHHHHHHTSCHHHHTTCCSCCHHHHHHHHHHHTTT
T ss_pred CEEEEE-EccccCCCCcc-cCCCCccc--CCEEEEEeeEEcCHHHHHHHHHhhCCcceecCCCCCChHHHHHHHHHHhhh
Confidence 456777 77777543222 23566665 689999999999999999986 41 2789999999999966432
Q ss_pred cCCCch---hhhhhccCcc-----------EEEEEEECCCCeEEEEecC-CCcccc
Q 031264 119 RGPYPA---HQVLRDLDGS-----------FGFVLYDCKAGTIFAALAS-PLNSFV 159 (162)
Q Consensus 119 rGpyp~---~~~l~~L~Gm-----------FAF~iyD~~~~~lflARD~-~G~k~~ 159 (162)
.+ -|. .+++++|+|| |+|+++|. ++|+++||+ +|+|++
T Consensus 158 ~~-~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d~--~~l~a~Rd~~~G~~Pl 210 (274)
T 3mdn_A 158 EH-DPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDG--QTLYAARYSSDHIAPS 210 (274)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEECS--SCEEEEEEESSSCCCC
T ss_pred cC-CHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEcC--CEEEEEECCCCCCCCe
Confidence 11 111 2689999999 99999985 689999998 999984
No 9
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=98.53 E-value=4e-08 Score=81.16 Aligned_cols=107 Identities=13% Similarity=0.032 Sum_probs=72.5
Q ss_pred EEEeCCceeEEeeCCCCCCCCCcceeec--CCcEEEEEcceecCHHHHHHHhCCCCCCchHHHHHHHHHHhHh-cCC-Cc
Q 031264 48 SINFGNAAALAYVPPENPNSVSQRWFCG--LHNVYCMFMGSLNNLSSLNKQYGLSKGSNEAMFVIEAYRTLRD-RGP-YP 123 (162)
Q Consensus 48 s~~~g~~~~lAys~~~~~~~~~~~~f~~--~~~i~~vFNGeIyN~~eLr~q~G~~ks~sE~eviieaY~~~~d-rGp-yp 123 (162)
.+-+|| .+.|=.-.... ...||.... .+++.++.||.|.|+.+ |++++...++||+|+|.++.....+ .+. .|
T Consensus 72 ~~~IgH-vR~AT~G~~~~-~NahPf~~~~~~~~~a~aHNG~i~n~~~-r~~~~~~~s~TDSEvi~~li~~~~~~~~~~~~ 148 (257)
T 1te5_A 72 ETVIGH-IRQANVGKVGL-SNTHPFIRELGGRYWTFAHNGQLADFQP-KPGFYRPVGETDSEAAFCDLLNRVRRAFPEPV 148 (257)
T ss_dssp EEEEEE-EEECCCSCCSG-GGCSCEEEEETTEEEEEEEESCBSSCCC-CCCSSCCSSCCHHHHHHHHHHHHHHHHCSSCC
T ss_pred cEEEEE-eecCCCCCCCc-CcCCCcEecCCCCeEEEEecCcccCchh-hhccCCcccCCHHHHHHHHHHHHHHHhcCCCc
Confidence 355666 44442221111 345666654 35799999999999999 8775556899999999998875332 111 11
Q ss_pred -h---hhhhhccC------ccEEEEEEECCCCeEEEEec----------CCCcccc
Q 031264 124 -A---HQVLRDLD------GSFGFVLYDCKAGTIFAALA----------SPLNSFV 159 (162)
Q Consensus 124 -~---~~~l~~L~------GmFAF~iyD~~~~~lflARD----------~~G~k~~ 159 (162)
. .+.++++. |.|+|++-|. .+|++.|| ++|++++
T Consensus 149 ~~~a~~~al~~l~~~~~~~G~~n~~l~~g--~~l~a~rd~~L~~~~~~~p~g~rpL 202 (257)
T 1te5_A 149 PVEVLLPVLISACDEYRKKGVFNALISDG--DWLFTFCSSKLAYITRRAPFGPARL 202 (257)
T ss_dssp CHHHHHHHHHHHHHHHHTTBCCEEEEESS--SCEEEECSSCEEEEEEESSCCCEEE
T ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEEcC--CEEEEEEcCCceEEeecCCCccccc
Confidence 1 23555555 9999999985 78999999 8988765
No 10
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.93 E-value=2.7e-05 Score=78.48 Aligned_cols=121 Identities=11% Similarity=0.077 Sum_probs=74.7
Q ss_pred CCChHHHHHHhhhcC-CCCcEEEEeCCceeEEeeCCCCC-CCCCcceeecCCcEEEEEcceecCHHHHHHHh--------
Q 031264 28 PKHPEEIFNEFLISQ-SSNAFSINFGNAAALAYVPPENP-NSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQY-------- 97 (162)
Q Consensus 28 ~~~~~~l~~~F~~~~-~~~a~s~~~g~~~~lAys~~~~~-~~~~~~~f~~~~~i~~vFNGeIyN~~eLr~q~-------- 97 (162)
-..++++.+.|..-. +.=.-.+.+|| --||-...+ ..+-||+. +++.||||.|+..+|+.+
T Consensus 182 mgl~~~v~~~y~dL~d~~~~g~~aigH---~RySTnt~p~w~~AQPf~------~laHNGeInn~~~nr~~m~are~~~~ 252 (1479)
T 1ea0_A 182 MFLAEQLTTFYPDLLDERFESDFAIYH---QRYSTNTFPTWPLAQPFR------MLAHNGEINTVKGNVNWMKAHETRME 252 (1479)
T ss_dssp SSCGGGHHHHCGGGGSTTCCBSEEEEE---ECCCSCSCCCSTTSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCC
T ss_pred CcCHHHhhhhhhhhcccccceeEEEee---ecccCCCCCCcccCCccE------EEEECChhhCHHHHHHHHHHhHhhhc
Confidence 456788888776432 21111233444 123321111 02334442 289999999999999542
Q ss_pred ----C--------C-CCCCchHHHHHHHHHHhHhcCCCchh----------------------------hhhhccCccEE
Q 031264 98 ----G--------L-SKGSNEAMFVIEAYRTLRDRGPYPAH----------------------------QVLRDLDGSFG 136 (162)
Q Consensus 98 ----G--------~-~ks~sE~eviieaY~~~~drGpyp~~----------------------------~~l~~L~GmFA 136 (162)
| . ..+.||+|+|.++.+.+...|.-..+ .+++.++|-||
T Consensus 253 ~~~~G~~l~~~~pii~~~~SDSevld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~s 332 (1479)
T 1ea0_A 253 HPAFGTHMQDLKPVIGVGLSDSGSLDTVFEVMVRAGRTAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAA 332 (1479)
T ss_dssp CSTTGGGHHHHCCSSCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEE
T ss_pred CchhhhhHHhcCCcCCCCCCcHHHHHHHHHHHHHcCCCHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEE
Confidence 2 2 57899999994444433222311111 23579999999
Q ss_pred EEEEECCCCeEEEEecCCCcccc
Q 031264 137 FVLYDCKAGTIFAALASPLNSFV 159 (162)
Q Consensus 137 F~iyD~~~~~lflARD~~G~k~~ 159 (162)
+++-|. +.+.++|||+|.||+
T Consensus 333 lv~~dg--~~l~a~~DrnGlRPl 353 (1479)
T 1ea0_A 333 LAMTDG--RWVVGGMDRNGLRPM 353 (1479)
T ss_dssp EEECSS--SEEEEECCTTCCSCC
T ss_pred EEEEeC--CEEEEEecCCCCcce
Confidence 999765 899999999999986
No 11
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.79 E-value=7.5e-05 Score=75.56 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=57.1
Q ss_pred EEEcceecCHHHHH------HH------h--------C--CCCCCchHHHHHHHHHHhHhcCCCchh-------------
Q 031264 81 CMFMGSLNNLSSLN------KQ------Y--------G--LSKGSNEAMFVIEAYRTLRDRGPYPAH------------- 125 (162)
Q Consensus 81 ~vFNGeIyN~~eLr------~q------~--------G--~~ks~sE~eviieaY~~~~drGpyp~~------------- 125 (162)
++.||||.|+..+| ++ + + ...+.||+|+|.++.+-+-..|.-..+
T Consensus 224 LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDSe~ld~~lelL~~~g~~l~~A~~~liPeaw~~~ 303 (1520)
T 1ofd_A 224 LGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDSYNLDSALELLVRTGRSPLEAAMILVPEAYKNQ 303 (1520)
T ss_dssp EEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHHHHHHHHHHHHHHTTCCHHHHHHHHSCCCCTTC
T ss_pred eEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcHHHHHHHHHHHHhcCCCHHHHHHHhCcchhccc
Confidence 89999999999998 32 1 3 258899999986555533222311111
Q ss_pred -----------------hhhhccCccEEEEEEECCCCeEEEEecCCCcccc
Q 031264 126 -----------------QVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFV 159 (162)
Q Consensus 126 -----------------~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~ 159 (162)
.+++.++|-||+++-|. +.+.++|||+|.||+
T Consensus 304 ~~m~~~~~~~~fyey~~~~me~~dGpaalv~~dg--~~l~a~~DrnGlRPl 352 (1520)
T 1ofd_A 304 PALKDYPEISDFHDYYSGLQEPWDGPALLVFSDG--KIVGAGLDRNGLRPA 352 (1520)
T ss_dssp GGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEECS--SEEEEEECTTCCSCC
T ss_pred ccccccHHHHHHHHHHHHhcccCCCCEEEEEEeC--CEEEEEecCCCCCce
Confidence 13688999999999876 899999999999986
No 12
>4afx_B Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_B
Probab=77.84 E-value=2.6 Score=24.92 Aligned_cols=22 Identities=27% Similarity=0.697 Sum_probs=17.4
Q ss_pred ccCccEEEEEEECCCCe-EEEEe
Q 031264 130 DLDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~-lflAR 151 (162)
.++--|-|+|||+.+++ ||++|
T Consensus 7 ~~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 4afx_B 7 KIDRPFHFMIYEETSGMLLFLGR 29 (36)
T ss_dssp ECCSCEEEEEEETTTTEEEEEEE
T ss_pred EeeCCEEEEEEECCCCcEEEEEE
Confidence 35677999999999886 66765
No 13
>1hle_B Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=74.16 E-value=4 Score=23.17 Aligned_cols=21 Identities=19% Similarity=0.320 Sum_probs=16.5
Q ss_pred cCccEEEEEEECCCCe-EEEEe
Q 031264 131 LDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 131 L~GmFAF~iyD~~~~~-lflAR 151 (162)
.+=-|-|+|+|+.+++ ||++|
T Consensus 6 ~drPFlf~I~~~~t~~iLF~G~ 27 (31)
T 1hle_B 6 ADHPFIFFIRHNPSANILFLGR 27 (31)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred EeCCEEEEEEECCCCcEEEEEE
Confidence 4556999999999985 57665
No 14
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_B
Probab=73.74 E-value=4 Score=23.64 Aligned_cols=21 Identities=29% Similarity=0.466 Sum_probs=16.6
Q ss_pred cCccEEEEEEECCCCe-EEEEe
Q 031264 131 LDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 131 L~GmFAF~iyD~~~~~-lflAR 151 (162)
.+=-|-|+|+|+.+++ ||++|
T Consensus 7 ~drPFlf~I~~~~t~~iLF~G~ 28 (34)
T 2h4p_B 7 VDHPFHFFIRHNKSKTILFFGR 28 (34)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEECCCCeEEEEEE
Confidence 4556999999999885 67765
No 15
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Probab=73.59 E-value=4 Score=23.89 Aligned_cols=21 Identities=19% Similarity=0.437 Sum_probs=16.9
Q ss_pred cCccEEEEEEECCCCe-EEEEe
Q 031264 131 LDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 131 L~GmFAF~iyD~~~~~-lflAR 151 (162)
.+=-|-|+|+|+.+++ ||++|
T Consensus 7 ~drPFlf~I~~~~t~~iLF~G~ 28 (35)
T 2xn6_B 7 IDRSFMLLILERSTRSILFLGK 28 (35)
T ss_dssp CCBCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEECCCCcEEEEEE
Confidence 4567999999999985 67775
No 16
>1as4_B Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A {Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_B* 3caa_B 4caa_B
Probab=72.53 E-value=2.4 Score=25.24 Aligned_cols=21 Identities=10% Similarity=0.292 Sum_probs=17.2
Q ss_pred cCccEEEEEEECCCCe-EEEEe
Q 031264 131 LDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 131 L~GmFAF~iyD~~~~~-lflAR 151 (162)
.+=-|-|+|+|+.+++ ||++|
T Consensus 9 ~drPFlf~I~~~~t~~iLF~G~ 30 (37)
T 1as4_B 9 FNRPFLMIIVPTDTQNIFFMSK 30 (37)
T ss_dssp CCSCEEEEEEETTSSCCSEEEE
T ss_pred ecCCEEEEEEeCCCCcEEEEEE
Confidence 5667999999999875 68776
No 17
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=71.37 E-value=4.7 Score=24.34 Aligned_cols=22 Identities=18% Similarity=0.431 Sum_probs=18.2
Q ss_pred ccCccEEEEEEECCCCe-EEEEe
Q 031264 130 DLDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~-lflAR 151 (162)
..+--|-|+|+|+.+++ ||++|
T Consensus 11 ~~drPFlf~I~~~~t~~iLF~G~ 33 (40)
T 2riv_B 11 QIDRSFMLLILERSTRSILFLGK 33 (40)
T ss_dssp ECCBCEEEEEEETTTTEEEEEEE
T ss_pred EecCCEEEEEEeCCCCcEEEEEE
Confidence 46778999999999985 67776
No 18
>3ndd_B Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 1ezx_B 3ndf_B 7api_B* 8api_B* 9api_B* 2d26_B
Probab=68.69 E-value=6.1 Score=23.29 Aligned_cols=22 Identities=14% Similarity=0.428 Sum_probs=17.3
Q ss_pred ccCccEEEEEEECCCCe-EEEEe
Q 031264 130 DLDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~-lflAR 151 (162)
.++--|-|+|||+.+++ ||++|
T Consensus 7 ~~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 3ndd_B 7 KFNKPFVFLMIEQNTKSPLFMGK 29 (36)
T ss_dssp ECCSCEEEEEEETTTCCEEEEEE
T ss_pred EeeCCEEEEEEECCCCcEEEEEE
Confidence 35677999999998875 67776
No 19
>3f02_C Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 1jjo_E
Probab=65.69 E-value=6 Score=24.91 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=17.6
Q ss_pred ccCccEEEEEEECCCCe-EEEEe
Q 031264 130 DLDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~-lflAR 151 (162)
.++--|-|+|||+.+++ ||++|
T Consensus 9 ~~drPFlf~I~~~~t~~iLF~G~ 31 (48)
T 3f02_C 9 IVDHPFFFLIRNRRTGTILFMGR 31 (48)
T ss_dssp ECCSCEEEEEEETTTCCEEEEEE
T ss_pred EeeCCEEEEEEECCCCcEEEEEE
Confidence 46778999999998875 67766
No 20
>3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: MSE; 1.50A {Enterococcus faecalis}
Probab=52.43 E-value=28 Score=28.17 Aligned_cols=37 Identities=14% Similarity=0.295 Sum_probs=32.2
Q ss_pred hhhhhccCccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 125 HQVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 125 ~~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
.++++...|..++++.|..+++++ +.+.+-..+.+|+
T Consensus 42 ~~~~~~~~~~~gv~v~D~~tG~~~-~~n~d~~~~~AS~ 78 (282)
T 3cjm_A 42 VASVKEFEGTVGISYLDLETGEQR-SVNGQHEFYTAST 78 (282)
T ss_dssp HHHHHHCSSEEEEEEEETTTCCEE-EESTTCCEECGGG
T ss_pred HHHHHhcCCeEEEEEEECCCCCEE-EECCCCeeccHHH
Confidence 368889999999999999999997 8888888888874
No 21
>1m93_C Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE inhibitor, viral protein; 1.65A {Cowpox virus} SCOP: e.1.1.1 PDB: 1c8o_B 1f0c_B
Probab=51.75 E-value=17 Score=21.89 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=17.5
Q ss_pred ccCccEEEEEEECCCCeEEEEe
Q 031264 130 DLDGSFGFVLYDCKAGTIFAAL 151 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~lflAR 151 (162)
..+=-|-|+|+|+...-||++|
T Consensus 13 ~~drPFlf~I~~~~~~iLF~G~ 34 (41)
T 1m93_C 13 SADHPFIYVIRHVDGKILFVGR 34 (41)
T ss_dssp ECCSCEEEEEEETTSCEEEEEE
T ss_pred EeeCCEEEEEEECCCCEEEEEE
Confidence 3677899999998844678876
No 22
>1o7e_A L2 beta lactamase; hydrolase, class A; 1.51A {Stenotrophomonas maltophilia} SCOP: e.3.1.1 PDB: 1n4o_A
Probab=50.85 E-value=13 Score=28.95 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=31.0
Q ss_pred hhhhhccCccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 125 HQVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 125 ~~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
++.+++..|..++++.|.++++++ +.+.....+.+|+
T Consensus 21 ~~~~~~~~~~~~~~v~d~~tG~~l-~~n~~~~~~~aS~ 57 (276)
T 1o7e_A 21 AALEKACAGRLGVTLLDTASGRRI-GHRQDERFPMCST 57 (276)
T ss_dssp HHHHHHHTSEEEEEEEETTTCCEE-EESTTSCEECGGG
T ss_pred HHHHHhcCCceEEEEEECCCCCEE-EECCCCccccHHH
Confidence 467778889999999999999987 7788888887774
No 23
>3dw0_A Class A carbapenemase KPC-2; beta-lactamase, antibiotic resistance, hydrolase; 1.60A {Escherichia coli}
Probab=48.17 E-value=15 Score=30.13 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=31.1
Q ss_pred hhhhccCccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 126 QVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 126 ~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
++.++..|..+++++|..+++++ +.+.+-..+.+|+
T Consensus 35 ~l~~~~~g~~gv~v~d~~tG~~l-~~n~d~~~~~AS~ 70 (294)
T 3dw0_A 35 KLEQDFGGSIGVYAMDTGSGATV-SYRAEERFPLCSS 70 (294)
T ss_dssp HHHHHHTSEEEEEEEETTTCCEE-EESTTSCEECGGG
T ss_pred HHHHhcCCeEEEEEEECCCCCEE-EECCCCcccchHH
Confidence 57778899999999999999998 7787888887774
No 24
>3qhy_A Beta-lactamase; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Bacillus anthracis}
Probab=45.84 E-value=18 Score=29.27 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=31.3
Q ss_pred hhhhccCccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 126 QVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 126 ~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
++.+...|..++++.|..+++++ +.+.+-..+.+|+
T Consensus 20 ~l~~~~~~~~gv~v~d~~tg~~l-~~n~d~~~~~AS~ 55 (271)
T 3qhy_A 20 QLEKKFDARLGVYAIDTGTNQTI-AYRPNERFAFAST 55 (271)
T ss_dssp HHHHHHTCEEEEEEEETTTCCEE-EESTTCCEECGGG
T ss_pred HHHHhcCCeEEEEEEECCCCCEE-EECCCCcccchHH
Confidence 67888899999999999999998 7787877777774
No 25
>2qpn_A Beta-lactamase GES-1; APO-enzyme, plasmid, hydrolase; 1.10A {Klebsiella pneumoniae} PDB: 3nia_A* 3ni9_A*
Probab=44.12 E-value=19 Score=28.27 Aligned_cols=36 Identities=11% Similarity=0.103 Sum_probs=30.3
Q ss_pred hhhhccCccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 126 QVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 126 ~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
+.+++..|..++++.|.++++++ +.+.....+.+|+
T Consensus 30 ~~~~~~~~~~~v~v~d~~tg~~l-~~~~~~~~~~aS~ 65 (287)
T 2qpn_A 30 KLEREKAAQIGVAIVDPQGEIVA-GHRMAQRFAMCST 65 (287)
T ss_dssp HHHHHHTCEEEEEEECTTCCEEE-EESTTSCEECGGG
T ss_pred HHHHhcCCeEEEEEEECCCCCEE-EECCCCceecHHH
Confidence 67788899999999999999986 6777777777773
No 26
>1w7f_A Beta-lactamase; hydrolase, isocitrate, bacillus licheniformis hydrolase; HET: ICT; 1.80A {Bacillus licheniformis}
Probab=44.00 E-value=19 Score=28.86 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=29.7
Q ss_pred hhhhccCccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 126 QVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 126 ~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
+++++..|..++++.|.++++++ +.+.+-..+.+|+
T Consensus 52 ~~~~~~~~~~~v~v~d~~tg~~l-~~n~~~~~~~aS~ 87 (307)
T 1w7f_A 52 KLEEQFDAKLGIFALDTGTNRTV-TYRPDERFAFAST 87 (307)
T ss_dssp HHHHHHTCEEEEEEEETTTCCEE-EESTTSCEECGGG
T ss_pred HHHHhcCCeEEEEEEECCCCCEE-EECCCCccccHHH
Confidence 56667789999999999999987 7787777777774
No 27
>1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} SCOP: e.3.1.1
Probab=42.24 E-value=21 Score=28.56 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=30.8
Q ss_pred hhhhhccCccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 125 HQVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 125 ~~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
.++++...|..+++++|.++++++ +.+..-..+.+|+
T Consensus 50 ~~~~~~~~~~~gv~v~D~~tG~~l-~~n~d~~~~~ASt 86 (266)
T 1alq_A 50 NDLEKKYNAHIGVYALDTKSGKEV-KFNSDKRFAYAST 86 (266)
T ss_dssp HHHHHHHTCEEEEEEEETTTCCEE-EESTTSCEECGGG
T ss_pred HHHHHhcCCcEEEEEEECCCCCEE-EECCCCeEecHHH
Confidence 357788889999999999999997 7787777777774
No 28
>4au2_A HSP47, serpin peptidase inhibitor, clade H (heat shock P 47), member 1, (collagen binding...; chaperone-peptide complex; 2.30A {Canis lupus familiaris} PDB: 4au3_A 4au4_A 4awr_A 4au3_B
Probab=37.04 E-value=29 Score=29.42 Aligned_cols=28 Identities=21% Similarity=0.362 Sum_probs=21.5
Q ss_pred ccCccEEEEEEECCCCe-EEEEe--cCCCcc
Q 031264 130 DLDGSFGFVLYDCKAGT-IFAAL--ASPLNS 157 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~-lflAR--D~~G~k 157 (162)
..+==|-|+|+|++++. ||++| |+-|.|
T Consensus 349 ~~drPFlf~I~d~~t~~iLF~G~v~~P~~~k 379 (392)
T 4au2_A 349 YADHPFIFLVRDTQSGSLLFIGRLVRPKGDK 379 (392)
T ss_dssp ECCSCEEEEEEETTTCCEEEEEEESCCSSCB
T ss_pred EeeCCEEEEEEECCCCcEEEEEEEeCCCCCc
Confidence 36778999999999876 67765 666655
No 29
>1mtp_B Serine proteinase inhibitor (serpin), chain B; structural genomics, protease inhibitor; 1.50A {Thermobifida fusca} SCOP: e.1.1.1
Probab=34.78 E-value=34 Score=20.90 Aligned_cols=21 Identities=19% Similarity=0.339 Sum_probs=16.7
Q ss_pred ccCccEEEEEEECCCCeEEEEe
Q 031264 130 DLDGSFGFVLYDCKAGTIFAAL 151 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~lflAR 151 (162)
..+=-|-|+|+|+ ..-||++|
T Consensus 12 ~~drPFlf~I~~~-~~iLF~G~ 32 (43)
T 1mtp_B 12 SVDRPFHIVVRRR-GAILFLGS 32 (43)
T ss_dssp ECCSCEEEEEEET-TEEEEEEE
T ss_pred EeeCCEEEEEEEC-CEEEEEEE
Confidence 3677899999999 55678876
No 30
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=31.61 E-value=25 Score=23.99 Aligned_cols=18 Identities=17% Similarity=0.239 Sum_probs=14.7
Q ss_pred eecCCcEEEEEcceecCH
Q 031264 73 FCGLHNVYCMFMGSLNNL 90 (162)
Q Consensus 73 f~~~~~i~~vFNGeIyN~ 90 (162)
|...++.++.|||.||+.
T Consensus 21 ~k~d~~~Yan~egC~Y~a 38 (65)
T 2x9a_A 21 WKEGDSRYANFENCIYEL 38 (65)
T ss_dssp EEETTEEEEEETTEEEEE
T ss_pred eecCCceEEEecCeEEEe
Confidence 445678899999999985
No 31
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.19 E-value=38 Score=22.16 Aligned_cols=40 Identities=15% Similarity=0.473 Sum_probs=22.0
Q ss_pred CCCCCCchHHHHHHHHHHhHhcCCCchhhhhhccCccEEEEEEECC
Q 031264 98 GLSKGSNEAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCK 143 (162)
Q Consensus 98 G~~ks~sE~eviieaY~~~~drGpyp~~~~l~~L~GmFAF~iyD~~ 143 (162)
++....+|.+ |-+.+..++. |. ..-++..+| ||||-|+..
T Consensus 22 nLp~~~t~~~-l~~~F~~~g~-g~---v~~~~~~~g-~afV~f~~~ 61 (99)
T 2cpd_A 22 NLMLSTSEEM-IEKEFNNIKP-GA---VERVKKIRD-YAFVHFSNR 61 (99)
T ss_dssp SCCTTCCHHH-HHHHHHTTST-TC---EEEEEECSS-EEEEEESSH
T ss_pred CCCCCCCHHH-HHHHHHhcCC-cc---eEEEEEeCC-eEEEEeCCH
Confidence 3455555554 4556655421 32 233455566 999998754
No 32
>3dy0_B C-terminus plasma serine protease inhibitor; serpin, blood clotting, hydrolase inhibitor; HET: IDS SGN; 1.55A {Homo sapiens} PDB: 1lq8_B*
Probab=30.98 E-value=43 Score=18.60 Aligned_cols=19 Identities=16% Similarity=0.340 Sum_probs=15.3
Q ss_pred cCccEEEEEEECCCCeEEEEe
Q 031264 131 LDGSFGFVLYDCKAGTIFAAL 151 (162)
Q Consensus 131 L~GmFAF~iyD~~~~~lflAR 151 (162)
++--|-|.|+|+ .-||++|
T Consensus 7 ~drPFlf~I~~~--~iLF~G~ 25 (29)
T 3dy0_B 7 FNRPFLMFIVDN--NILFLGK 25 (29)
T ss_dssp CCSCEEEEEESS--SEEEEEE
T ss_pred ecCCEEEEEEcC--ceEEEEE
Confidence 566799999998 6788876
No 33
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=30.86 E-value=19 Score=24.34 Aligned_cols=23 Identities=13% Similarity=0.469 Sum_probs=18.8
Q ss_pred ecCCcEEEEEcceecCHHHHHHH
Q 031264 74 CGLHNVYCMFMGSLNNLSSLNKQ 96 (162)
Q Consensus 74 ~~~~~i~~vFNGeIyN~~eLr~q 96 (162)
+..++.+++.+|.+|+.....++
T Consensus 15 ~~~~~~wv~i~g~VYDvT~f~~~ 37 (82)
T 1x3x_A 15 NTQNDLWIIYDGEVHDMTSFYKE 37 (82)
T ss_dssp EETTEEEEEETTEEEECGGGGGG
T ss_pred CCCCCEEEEECCEEEECCcchhh
Confidence 44568999999999999987654
No 34
>3p09_A Beta-lactamase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich, cytosol; HET: MSE; 1.90A {Francisella tularensis subsp}
Probab=30.65 E-value=21 Score=29.14 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=26.8
Q ss_pred hhhhccCccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 126 QVLRDLDGSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 126 ~~l~~L~GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
++.++..|..++++.|..+++++ +.+.+-..+.+|+
T Consensus 30 ~~~~~~~~~~gv~v~d~~tG~~l-~~n~d~~~~~AS~ 65 (290)
T 3p09_A 30 NLENKYDGKIGIYTLNTDDKTNI-KYNESYHFPICSV 65 (290)
T ss_dssp HHHHHHCSEEEEEEECC----CC-EESTTSCEECGGG
T ss_pred HHHHhcCCeEEEEEEECCCCCEE-EECCCCeEecHHH
Confidence 56777899999999999999988 7788878787774
No 35
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=29.96 E-value=20 Score=24.81 Aligned_cols=23 Identities=13% Similarity=0.128 Sum_probs=18.9
Q ss_pred ecCCcEEEEEcceecCHHHHHHH
Q 031264 74 CGLHNVYCMFMGSLNNLSSLNKQ 96 (162)
Q Consensus 74 ~~~~~i~~vFNGeIyN~~eLr~q 96 (162)
+..++.+++++|.+||.....++
T Consensus 17 ~~~~~~wv~i~g~VYDvT~f~~~ 39 (88)
T 3lf5_A 17 NKKDDCWICIRGFVYNVSPYMEY 39 (88)
T ss_dssp EETTEEEEEETTEEEECGGGTTT
T ss_pred CCCCCEEEEECCEEEECccchhh
Confidence 44578999999999999987643
No 36
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=29.47 E-value=27 Score=24.91 Aligned_cols=22 Identities=5% Similarity=0.181 Sum_probs=18.1
Q ss_pred cCCcEEEEEcceecCHHHHHHH
Q 031264 75 GLHNVYCMFMGSLNNLSSLNKQ 96 (162)
Q Consensus 75 ~~~~i~~vFNGeIyN~~eLr~q 96 (162)
..++.+++.+|.+||......+
T Consensus 21 ~~~~~wv~i~g~VYDvT~f~~~ 42 (104)
T 1hko_A 21 NSKSTWLILHYKVYDLTKFLEE 42 (104)
T ss_dssp SSSSBEEEETTEEEEHHHHSSS
T ss_pred CCCCEEEEECCEEEECCcchhh
Confidence 4568999999999999987543
No 37
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=29.24 E-value=37 Score=22.45 Aligned_cols=38 Identities=18% Similarity=0.502 Sum_probs=21.5
Q ss_pred CCCCCCchHHHHHHHHHHhHhcCCCchhhhhhccCccEEEEEEECC
Q 031264 98 GLSKGSNEAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCK 143 (162)
Q Consensus 98 G~~ks~sE~eviieaY~~~~drGpyp~~~~l~~L~GmFAF~iyD~~ 143 (162)
++..+.+|-+ |.+++..+ |+ -.-++..+| ||||-|+..
T Consensus 18 nl~~~~t~~~-l~~~F~~~---G~---i~~v~~~~~-~afV~f~~~ 55 (103)
T 2dgu_A 18 NLANTVTEEI-LEKAFSQF---GK---LERVKKLKD-YAFIHFDER 55 (103)
T ss_dssp CCCTTCCHHH-HHHHHHHH---SC---EEEEEECSS-CEEEEESSH
T ss_pred CCCCCCCHHH-HHHHHHhc---CC---EEEEEEECC-EEEEEeCCH
Confidence 3444555554 45666654 43 233445566 888888653
No 38
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=28.77 E-value=21 Score=24.40 Aligned_cols=22 Identities=0% Similarity=0.170 Sum_probs=18.2
Q ss_pred cCCcEEEEEcceecCHHHHHHH
Q 031264 75 GLHNVYCMFMGSLNNLSSLNKQ 96 (162)
Q Consensus 75 ~~~~i~~vFNGeIyN~~eLr~q 96 (162)
..++.+++.+|.+||......+
T Consensus 19 ~~~~~wv~i~g~VYDvT~f~~~ 40 (88)
T 2ibj_A 19 TKDKNWFIIHNNVYDVTAFLNE 40 (88)
T ss_dssp ETTEEEEEETTEEEECGGGTTT
T ss_pred CCCCEEEEECCEEEECCcchhh
Confidence 4578999999999999887543
No 39
>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*
Probab=28.40 E-value=22 Score=24.79 Aligned_cols=23 Identities=9% Similarity=0.340 Sum_probs=18.7
Q ss_pred ecCCcEEEEEcceecCHHHHHHH
Q 031264 74 CGLHNVYCMFMGSLNNLSSLNKQ 96 (162)
Q Consensus 74 ~~~~~i~~vFNGeIyN~~eLr~q 96 (162)
+..++.+++.+|.+||......+
T Consensus 21 ~~~~~~wv~i~g~VYDvT~f~~~ 43 (92)
T 3ner_A 21 NSLKELWLVIHGRVYDVTRFLNE 43 (92)
T ss_dssp EETTEEEEEETTEEEECGGGTTT
T ss_pred CCCCCEEEEECCEEEEccccccc
Confidence 34578999999999999987543
No 40
>2pef_A Serine protease inhibitor; serpin; 1.60A {Thermoanaerobacter tengcongensis} PDB: 2vh4_A 2pee_A
Probab=27.80 E-value=46 Score=27.98 Aligned_cols=21 Identities=29% Similarity=0.468 Sum_probs=17.1
Q ss_pred cCccEEEEEEECCCCe-EEEEe
Q 031264 131 LDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 131 L~GmFAF~iyD~~~~~-lflAR 151 (162)
.+=-|.|+|+|+.++. ||++|
T Consensus 347 ~drPFlf~I~~~~t~~iLF~G~ 368 (373)
T 2pef_A 347 LNRPFIFAIIDNSTNLPIFIGT 368 (373)
T ss_dssp EEEEEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEECCCCcEEEEEE
Confidence 4557999999999987 77765
No 41
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=26.61 E-value=47 Score=21.76 Aligned_cols=41 Identities=10% Similarity=0.163 Sum_probs=22.8
Q ss_pred CCCCCCchHHHHHHHHHHhHhcCCCchhhhhhccCccEEEEEEECC
Q 031264 98 GLSKGSNEAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCK 143 (162)
Q Consensus 98 G~~ks~sE~eviieaY~~~~drGpyp~~~~l~~L~GmFAF~iyD~~ 143 (162)
+++.+.+|-+ |-+.+.. +|+----.++.+-+| ||||-|+..
T Consensus 18 ~Lp~~~te~~-L~~~F~~---~G~i~~v~i~~~srG-faFV~F~~~ 58 (89)
T 3d2w_A 18 RCTEDMTAEE-LQQFFCQ---YGEVVDVFIPKPFRA-FAFVTFADD 58 (89)
T ss_dssp SCCTTCCHHH-HHHHHTT---TSCEEEEECCSSCCS-EEEEEESCH
T ss_pred CCCCCCCHHH-HHHHHhc---cCCEEEEEEeeCCCC-EEEEEECCH
Confidence 4566666765 3455554 453111123334456 999999764
No 42
>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1
Probab=26.49 E-value=25 Score=24.21 Aligned_cols=23 Identities=9% Similarity=0.215 Sum_probs=18.8
Q ss_pred ecCCcEEEEEcceecCHHHHHHH
Q 031264 74 CGLHNVYCMFMGSLNNLSSLNKQ 96 (162)
Q Consensus 74 ~~~~~i~~vFNGeIyN~~eLr~q 96 (162)
+..++.+++.+|.+||.....++
T Consensus 19 ~~~~~~wv~i~g~VYDvT~f~~~ 41 (90)
T 1cxy_A 19 HSPDDCWMAIHGKVYDLTPYVPN 41 (90)
T ss_dssp EETTEEEEEETTEEEECTTTGGG
T ss_pred cCCCCEEEEECCEEEECccchhh
Confidence 34568999999999999887654
No 43
>4dy0_A GLIA-derived nexin; serpin, protease inhibitor, thrombin, cell surface, hydrolas inhibitor; HET: IDS SGN; 2.35A {Homo sapiens} PDB: 4dy7_C
Probab=25.86 E-value=52 Score=27.69 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=17.9
Q ss_pred ccCccEEEEEEECCCCe-EEEEe
Q 031264 130 DLDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~-lflAR 151 (162)
..+==|-|+|+|+.++. ||++|
T Consensus 353 ~~drPFlf~I~d~~t~~iLF~G~ 375 (379)
T 4dy0_A 353 IVDRPFLFFIRHNPTGAVLFMGQ 375 (379)
T ss_dssp ECCSCEEEEEEETTTTEEEEEEE
T ss_pred EecCCEEEEEEECCCCCEEEEEE
Confidence 46788999999999987 56654
No 44
>4eo1_A Attachment protein G3P; TOLA binding protein, infection, filamentous phage, ATT protein, TOLA binding, coat protein, TOLA, phage coat; 1.80A {Enterobacteria phage ike}
Probab=25.69 E-value=41 Score=23.22 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=15.2
Q ss_pred eeec-CCcEEEEEcceecCHH
Q 031264 72 WFCG-LHNVYCMFMGSLNNLS 91 (162)
Q Consensus 72 ~f~~-~~~i~~vFNGeIyN~~ 91 (162)
.|.. .++.++.|+|.||+..
T Consensus 23 v~k~d~~~~Y~n~~GCiYeAt 43 (70)
T 4eo1_A 23 VFKGDEGGFYINYNGCEYEAT 43 (70)
T ss_dssp CEECTTSCEEEEETTEEEECC
T ss_pred eEeeCCCceEEEEcCeEEEee
Confidence 3444 5688999999999853
No 45
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=25.44 E-value=31 Score=23.94 Aligned_cols=22 Identities=5% Similarity=0.128 Sum_probs=18.1
Q ss_pred ecCCcEEEEEcceecCHHHHHH
Q 031264 74 CGLHNVYCMFMGSLNNLSSLNK 95 (162)
Q Consensus 74 ~~~~~i~~vFNGeIyN~~eLr~ 95 (162)
+..++.+++.+|.+||......
T Consensus 16 ~~~~~~wv~i~g~VYDvT~f~~ 37 (93)
T 1cyo_A 16 NNSKSTWLILHYKVYDLTKFLE 37 (93)
T ss_dssp EETTEEEEEETTEEEECTTTTT
T ss_pred CCCCCEEEEECCEEEECCCcch
Confidence 3457899999999999987654
No 46
>2j9o_A TLL2115 protein; penicillin-binding protein, hydrolase, lactamase, thioestera DD-peptidase; 1.50A {Synechococcus elongatus} PDB: 2jbf_A* 2j7v_A 2j8y_A*
Probab=24.76 E-value=85 Score=24.89 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=27.3
Q ss_pred hhhhccC-ccEEEEEEECCCCeEEEEecCCCccccccC
Q 031264 126 QVLRDLD-GSFGFVLYDCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 126 ~~l~~L~-GmFAF~iyD~~~~~lflARD~~G~k~~~~~ 162 (162)
+.+++.. +.-++++.|.++++++ +.+.....+.+|+
T Consensus 26 ~~~~~~~~~~~~~~v~d~~tG~il-~~~~~~~~~paS~ 62 (298)
T 2j9o_A 26 QLVSRQPNLTAGLYFFNLDSGASL-NVGGDQVFPAAST 62 (298)
T ss_dssp HHHHTCTTCEEEEEEEETTTCEEE-EEBTTSCEECGGG
T ss_pred HHHHhCCCCeEEEEEEECCCCCEE-EECCCCeEecHhH
Confidence 4455543 4668999999999988 7788888887774
No 47
>4hes_A Beta-lactamase class A-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, COG COG2367, H; HET: MSE; 1.90A {Veillonella parvula}
Probab=23.76 E-value=68 Score=25.07 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=28.8
Q ss_pred hhhhcc--CccEEEEEE---ECCCCeEEEEecCCCccccccC
Q 031264 126 QVLRDL--DGSFGFVLY---DCKAGTIFAALASPLNSFVFSL 162 (162)
Q Consensus 126 ~~l~~L--~GmFAF~iy---D~~~~~lflARD~~G~k~~~~~ 162 (162)
++++++ .|..+++++ |.++++++.+++.+-..|.||+
T Consensus 19 ~~~~~~~~~~~~~~~v~~l~d~~~~~vl~~~n~d~~~~~AS~ 60 (275)
T 4hes_A 19 TVIKELAPAGNISYAVLQFDDEEEPTLIAARGENTVHSSASL 60 (275)
T ss_dssp HHHHHHCTTSEEEEEEEEECTTSCCEEEEEESTTCCEECGGG
T ss_pred HHHHhcccCCceEEEEEEEEcCCCceEEEEECCCceecchHH
Confidence 455554 588888887 5667889999999988888884
No 48
>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}
Probab=23.64 E-value=42 Score=24.38 Aligned_cols=21 Identities=10% Similarity=0.264 Sum_probs=18.3
Q ss_pred CCcEEEEEcceecCHHHHHHH
Q 031264 76 LHNVYCMFMGSLNNLSSLNKQ 96 (162)
Q Consensus 76 ~~~i~~vFNGeIyN~~eLr~q 96 (162)
.++.|++.+|.+||......+
T Consensus 37 ~~d~wvvi~G~VYDVT~fl~~ 57 (112)
T 2keo_A 37 DGGFWTVIDGKVYDIKDFQTQ 57 (112)
T ss_dssp HTCCEEEETTEEEEHHHHHHH
T ss_pred CCCEEEEECCEEEECCcchhh
Confidence 467899999999999998765
No 49
>2ivf_C Ethylbenzene dehydrogenase gamma-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=23.30 E-value=30 Score=27.99 Aligned_cols=20 Identities=5% Similarity=0.076 Sum_probs=15.2
Q ss_pred cEEEEEEECCCCeEEEEecCCCcccc
Q 031264 134 SFGFVLYDCKAGTIFAALASPLNSFV 159 (162)
Q Consensus 134 mFAF~iyD~~~~~lflARD~~G~k~~ 159 (162)
-|||++||-++++ |.|.|-|
T Consensus 184 ~vafAvWdG~~~e------r~g~Ksv 203 (214)
T 2ivf_C 184 KIAFAVWSGGNAE------RSGRKSY 203 (214)
T ss_dssp EEEEEEECGGGTC------CTTCSEE
T ss_pred EEEEEEEcCCCcc------cCCcccc
Confidence 4999999987764 6677654
No 50
>2xep_A ORF12; hydrolase; 1.50A {Streptomyces clavuligerus} PDB: 2xf3_A* 2xfs_A* 2xft_A 2xgn_A 2xh9_A*
Probab=21.91 E-value=72 Score=27.96 Aligned_cols=37 Identities=11% Similarity=-0.078 Sum_probs=31.5
Q ss_pred hhhhccCccEEEEEEECCCC--eEEEEecCCCccccccC
Q 031264 126 QVLRDLDGSFGFVLYDCKAG--TIFAALASPLNSFVFSL 162 (162)
Q Consensus 126 ~~l~~L~GmFAF~iyD~~~~--~lflARD~~G~k~~~~~ 162 (162)
+.++.+.|..++++.|..++ +..+..+.+-..+.+|+
T Consensus 136 ~~~~~~~~~~~v~v~D~~tG~~~~~~~~n~d~~~~~ASt 174 (458)
T 2xep_A 136 ETLHTPGVQHSVYAVRLTPDGHEVLHASAPERPMPTGSA 174 (458)
T ss_dssp HHHCCTTEEEEEEEEEEETTEEEEEEEESTTSCEECGGG
T ss_pred HHHHhcCCeEEEEEEECCCCCceEEEEECCCCcCccHHH
Confidence 57888999999999999999 77778888888888774
No 51
>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A
Probab=21.26 E-value=37 Score=24.14 Aligned_cols=20 Identities=15% Similarity=0.380 Sum_probs=17.6
Q ss_pred cEEEEEcceecCHHHHHHHh
Q 031264 78 NVYCMFMGSLNNLSSLNKQY 97 (162)
Q Consensus 78 ~i~~vFNGeIyN~~eLr~q~ 97 (162)
+++++.+|.||+...-+..+
T Consensus 21 ~~~vaI~G~VYDVT~~~~~~ 40 (102)
T 1j03_A 21 PIYVAIKGRVFDVTTGKSFY 40 (102)
T ss_dssp CBEEEETTEEEECGGGHHHH
T ss_pred CEEEEECCEEEECCCCcccc
Confidence 69999999999999976655
No 52
>2oay_A C1-inhibitor, plasma protease C1 inhibitor, C1 INH, C1INH; latent serpin, RCL insertion, immune system,hydrolase inhibi; HET: NAG; 2.35A {Homo sapiens}
Probab=20.83 E-value=74 Score=26.95 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=15.5
Q ss_pred CccEEEEEEECCCCe-EEEEe
Q 031264 132 DGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 132 ~GmFAF~iyD~~~~~-lflAR 151 (162)
+=-|.|+|+|+.++. ||++|
T Consensus 364 drPFlf~I~~~~t~~iLF~G~ 384 (390)
T 2oay_A 364 QQPFLFMLWDQQHKFPVFMGR 384 (390)
T ss_dssp CSCEEEEEEETTTTEEEEEEE
T ss_pred cCCEEEEEEECCCCCEEEEEE
Confidence 446999999999886 56664
No 53
>3f5n_A Neuroserpin; cleaved form, fenib, human, tissue PLAS activator, hydrolase inhibitor; 3.15A {Homo sapiens}
Probab=20.53 E-value=68 Score=27.44 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=17.6
Q ss_pred ccCccEEEEEEECCCCe-EEEEe
Q 031264 130 DLDGSFGFVLYDCKAGT-IFAAL 151 (162)
Q Consensus 130 ~L~GmFAF~iyD~~~~~-lflAR 151 (162)
..+=-|-|+|+|+.++. ||++|
T Consensus 368 ~~drPFlF~I~~~~t~~iLF~G~ 390 (407)
T 3f5n_A 368 IVDHPFFFLIRNRRTGTILFMGR 390 (407)
T ss_dssp ECCSCEEEEEEETTTCCEEEEEE
T ss_pred EecCCEEEEEEECCCCcEEEEEE
Confidence 35667999999999886 67776
No 54
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.01 E-value=1.1e+02 Score=19.55 Aligned_cols=37 Identities=14% Similarity=0.222 Sum_probs=21.1
Q ss_pred CCCCCchHHHHHHHHHHhHhcCCCchhhhhhccCccEEEEEEECC
Q 031264 99 LSKGSNEAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCK 143 (162)
Q Consensus 99 ~~ks~sE~eviieaY~~~~drGpyp~~~~l~~L~GmFAF~iyD~~ 143 (162)
+....+|-+ |-+.+.. .|+ -.-++-.+| ||||-|+..
T Consensus 18 Lp~~~t~~~-l~~~F~~---~G~---v~~v~~~~~-~afV~f~~~ 54 (92)
T 2dgt_A 18 ISPTCTNQE-LRAKFEE---YGP---VIECDIVKD-YAFVHMERA 54 (92)
T ss_dssp CCSSCCHHH-HHHHHHT---TSC---CCEEEECSS-EEEEEESCH
T ss_pred CCCCCCHHH-HHHHHHh---cCC---eEEEEEECC-EEEEEECCH
Confidence 444455554 3555655 454 233444556 999998763
Done!