Query 031268
Match_columns 162
No_of_seqs 234 out of 1130
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 18:41:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031268.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031268hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 1.4E-25 4.8E-30 157.1 11.5 117 22-160 4-121 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 1E-23 3.5E-28 150.5 11.6 127 24-160 5-134 (155)
3 1ktg_A Diadenosine tetraphosph 99.9 2.7E-22 9.1E-27 139.8 12.1 113 22-153 3-119 (138)
4 1vcd_A NDX1; nudix protein, di 99.9 2.8E-22 9.7E-27 137.6 11.6 107 22-153 2-108 (126)
5 3gg6_A Nudix motif 18, nucleos 99.9 2E-22 6.8E-27 143.5 10.6 113 16-154 14-132 (156)
6 2fvv_A Diphosphoinositol polyp 99.9 3.5E-22 1.2E-26 148.1 11.8 114 18-154 36-152 (194)
7 2pbt_A AP4A hydrolase; nudix p 99.9 5.4E-22 1.8E-26 137.4 11.5 116 22-159 4-120 (134)
8 3son_A Hypothetical nudix hydr 99.9 1.2E-21 4E-26 138.5 12.9 122 23-158 6-131 (149)
9 3i9x_A MUTT/nudix family prote 99.9 1.5E-22 5E-27 148.8 8.2 126 16-159 21-163 (187)
10 3grn_A MUTT related protein; s 99.9 1.9E-21 6.3E-26 138.1 12.5 109 20-152 6-119 (153)
11 1rya_A GDP-mannose mannosyl hy 99.9 2.6E-21 8.9E-26 137.9 12.5 127 20-161 16-149 (160)
12 4dyw_A MUTT/nudix family prote 99.9 1.1E-21 3.8E-26 140.3 10.1 120 19-160 26-149 (157)
13 2yyh_A MUTT domain, 8-OXO-DGTP 99.9 2.8E-21 9.5E-26 135.1 11.3 113 20-153 7-124 (139)
14 3id9_A MUTT/nudix family prote 99.9 3.7E-21 1.2E-25 139.0 12.1 117 19-159 20-143 (171)
15 3shd_A Phosphatase NUDJ; nudix 99.9 4.5E-21 1.5E-25 135.9 11.7 94 47-149 16-112 (153)
16 3gwy_A Putative CTP pyrophosph 99.9 7.6E-21 2.6E-25 133.1 12.7 101 47-159 17-124 (140)
17 3fcm_A Hydrolase, nudix family 99.9 7.1E-21 2.4E-25 140.9 12.9 131 16-159 39-175 (197)
18 3f6a_A Hydrolase, nudix family 99.9 5.2E-21 1.8E-25 136.7 11.6 118 21-153 5-134 (159)
19 3eds_A MUTT/nudix family prote 99.9 1.4E-21 4.8E-26 139.1 8.6 117 21-153 20-136 (153)
20 2w4e_A MUTT/nudix family prote 99.9 2E-21 7E-26 137.2 9.3 109 23-154 6-119 (145)
21 3q1p_A Phosphohydrolase (MUTT/ 99.9 3.3E-21 1.1E-25 143.8 10.2 120 20-159 66-186 (205)
22 1sjy_A MUTT/nudix family prote 99.8 1.1E-20 3.6E-25 134.5 12.3 115 20-156 11-134 (159)
23 3exq_A Nudix family hydrolase; 99.8 7.3E-21 2.5E-25 136.5 11.4 119 20-160 8-130 (161)
24 3q93_A 7,8-dihydro-8-oxoguanin 99.8 1.1E-20 3.7E-25 137.7 12.2 96 47-152 36-134 (176)
25 2kdv_A RNA pyrophosphohydrolas 99.8 1.9E-20 6.4E-25 135.0 13.2 120 19-152 5-135 (164)
26 2b0v_A Nudix hydrolase; struct 99.8 1.1E-20 3.8E-25 133.6 11.8 98 47-152 19-120 (153)
27 2o1c_A DATP pyrophosphohydrola 99.8 2.7E-20 9.1E-25 130.9 13.4 123 23-159 10-140 (150)
28 2fb1_A Conserved hypothetical 99.8 2.6E-21 9E-26 146.5 8.2 116 20-153 11-129 (226)
29 2azw_A MUTT/nudix family prote 99.8 1.3E-20 4.3E-25 132.5 10.5 112 21-153 17-131 (148)
30 3h95_A Nucleoside diphosphate- 99.8 2.1E-20 7.1E-25 138.7 12.0 112 20-152 24-140 (199)
31 3cng_A Nudix hydrolase; struct 99.8 1.6E-20 5.4E-25 138.3 11.0 112 21-159 39-155 (189)
32 3hhj_A Mutator MUTT protein; n 99.8 5.3E-20 1.8E-24 131.2 13.4 100 47-158 41-147 (158)
33 2pqv_A MUTT/nudix family prote 99.8 1E-20 3.4E-25 134.3 9.2 112 19-152 16-129 (154)
34 2jvb_A Protein PSU1, mRNA-deca 99.8 2.2E-20 7.4E-25 131.4 10.7 108 24-154 6-116 (146)
35 3ees_A Probable pyrophosphohyd 99.8 7E-20 2.4E-24 129.2 13.3 94 47-152 33-130 (153)
36 3gz5_A MUTT/nudix family prote 99.8 1.2E-20 4.1E-25 144.1 9.9 114 20-151 20-138 (240)
37 2yvp_A NDX2, MUTT/nudix family 99.8 1.3E-20 4.5E-25 137.5 9.3 112 20-154 39-156 (182)
38 3fk9_A Mutator MUTT protein; s 99.8 1.7E-20 5.9E-25 138.1 10.0 99 48-152 16-114 (188)
39 3o8s_A Nudix hydrolase, ADP-ri 99.8 1.7E-20 5.7E-25 140.1 9.9 119 21-160 69-188 (206)
40 1k2e_A Nudix homolog; nudix/MU 99.8 2.5E-20 8.7E-25 132.9 10.4 56 23-92 2-57 (156)
41 3r03_A Nudix hydrolase; struct 99.8 1.7E-19 5.7E-24 126.3 13.2 113 22-159 8-127 (144)
42 1v8y_A ADP-ribose pyrophosphat 99.8 9.4E-20 3.2E-24 131.7 11.4 109 22-155 34-147 (170)
43 2fkb_A Putative nudix hydrolas 99.8 2.2E-19 7.6E-24 130.6 13.5 109 21-153 36-150 (180)
44 3oga_A Nucleoside triphosphata 99.8 1E-19 3.5E-24 130.6 11.5 104 47-158 39-156 (165)
45 3f13_A Putative nudix hydrolas 99.8 4.4E-20 1.5E-24 133.2 9.2 85 48-149 28-112 (163)
46 3fjy_A Probable MUTT1 protein; 99.8 4E-20 1.4E-24 148.7 9.8 130 23-153 4-159 (364)
47 3o6z_A GDP-mannose pyrophospha 99.8 8.8E-20 3E-24 134.6 10.1 112 22-156 45-170 (191)
48 1nqz_A COA pyrophosphatase (MU 99.8 9.5E-20 3.3E-24 134.3 10.3 113 20-153 32-152 (194)
49 3q91_A Uridine diphosphate glu 99.8 1.1E-19 3.8E-24 137.0 10.8 115 20-156 34-192 (218)
50 1vhz_A ADP compounds hydrolase 99.8 1.5E-19 5E-24 134.3 11.3 99 48-156 61-164 (198)
51 1f3y_A Diadenosine 5',5'''-P1, 99.8 5.1E-20 1.8E-24 131.5 8.4 124 18-155 10-148 (165)
52 2rrk_A ORF135, CTP pyrophospho 99.8 3.5E-19 1.2E-23 124.0 12.2 94 47-152 20-117 (140)
53 2fml_A MUTT/nudix family prote 99.8 2.8E-19 9.7E-24 138.9 12.4 119 19-153 36-158 (273)
54 2b06_A MUTT/nudix family prote 99.8 7.3E-19 2.5E-23 124.7 13.1 119 20-159 6-127 (155)
55 1hzt_A Isopentenyl diphosphate 99.8 1.1E-19 3.7E-24 133.6 9.0 116 21-154 31-152 (190)
56 1q27_A Putative nudix hydrolas 99.8 2.3E-19 7.9E-24 129.4 10.2 108 22-153 34-149 (171)
57 1g0s_A Hypothetical 23.7 kDa p 99.8 2.5E-19 8.4E-24 134.1 10.6 111 23-155 58-182 (209)
58 1mut_A MUTT, nucleoside tripho 99.8 3.5E-20 1.2E-24 127.3 4.8 94 47-152 16-113 (129)
59 1mk1_A ADPR pyrophosphatase; n 99.8 1.6E-19 5.3E-24 134.8 8.1 110 23-155 44-161 (207)
60 2dsc_A ADP-sugar pyrophosphata 99.8 5.9E-19 2E-23 132.1 9.9 113 23-154 62-185 (212)
61 2a6t_A SPAC19A8.12; alpha/beta 99.8 7.1E-19 2.4E-23 136.5 9.7 109 23-154 102-214 (271)
62 1vk6_A NADH pyrophosphatase; 1 99.8 7.1E-19 2.4E-23 136.4 9.6 94 47-152 151-246 (269)
63 2qjo_A Bifunctional NMN adenyl 99.8 1.7E-18 5.8E-23 137.4 11.6 121 20-160 201-333 (341)
64 3e57_A Uncharacterized protein 99.8 1.2E-18 4.1E-23 130.4 8.7 111 19-152 64-188 (211)
65 1x51_A A/G-specific adenine DN 99.8 3.9E-18 1.3E-22 121.2 10.3 111 20-152 17-133 (155)
66 2qjt_B Nicotinamide-nucleotide 99.7 2.1E-17 7.1E-22 131.8 10.8 112 21-152 207-329 (352)
67 1q33_A Pyrophosphatase, ADP-ri 99.7 9E-17 3.1E-21 125.9 11.1 70 20-89 108-181 (292)
68 1u20_A U8 snoRNA-binding prote 99.7 1.7E-16 5.8E-21 118.9 10.2 120 20-152 31-165 (212)
69 3qsj_A Nudix hydrolase; struct 99.7 1E-15 3.6E-20 116.2 12.0 123 20-157 6-193 (232)
70 3fsp_A A/G-specific adenine gl 99.6 6.2E-16 2.1E-20 124.7 9.5 90 47-152 252-345 (369)
71 2dho_A Isopentenyl-diphosphate 99.6 3.1E-15 1.1E-19 113.8 11.4 118 20-155 57-193 (235)
72 2pny_A Isopentenyl-diphosphate 99.6 5.2E-15 1.8E-19 113.3 11.0 118 20-155 68-204 (246)
73 2xsq_A U8 snoRNA-decapping enz 99.6 2.4E-14 8.2E-19 107.6 10.8 94 48-150 66-171 (217)
74 3dup_A MUTT/nudix family prote 99.5 7.8E-14 2.7E-18 109.3 13.2 122 19-155 115-245 (300)
75 3rh7_A Hypothetical oxidoreduc 99.5 8.8E-14 3E-18 110.1 7.0 104 20-161 181-287 (321)
76 3bho_A Cleavage and polyadenyl 99.4 5.7E-13 2E-17 98.3 9.8 116 19-149 55-182 (208)
77 3kvh_A Protein syndesmos; NUDT 99.4 4.5E-13 1.5E-17 98.0 4.8 98 17-128 16-115 (214)
78 2x5c_A Hypothetical protein OR 24.8 1.3E+02 0.0045 18.9 4.3 23 45-67 71-93 (131)
79 1vig_A Vigilin; RNA-binding pr 20.7 43 0.0015 19.4 1.4 15 78-92 27-41 (71)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.93 E-value=1.4e-25 Score=157.12 Aligned_cols=117 Identities=23% Similarity=0.216 Sum_probs=84.4
Q ss_pred eeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEe
Q 031268 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (162)
Q Consensus 22 r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~ 101 (162)
+.+||+|++++ ++|||++++ .+.|.||||++|+|||+.+||+||++||||+.+... ..++.+.+
T Consensus 4 ~~aag~vv~~~--------------~~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~-~~l~~~~~ 67 (134)
T 3i7u_A 4 EFSAGGVLFKD--------------GEVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL-DYIGEIHY 67 (134)
T ss_dssp EEEEEEEEEET--------------TEEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEEE
T ss_pred EEEEEEEEEEC--------------CEEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEe-eeeeeeeE
Confidence 46888999874 389999875 468999999999999999999999999999998766 46666544
Q ss_pred ecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh-ccccccc
Q 031268 102 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK-HSNLVGM 160 (162)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~-~~~l~~~ 160 (162)
...... ......+++|.+...+... .++.++.+++||+++|+.+++ .++.+++
T Consensus 68 ~~~~~~-----~~~~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~e~~~~l~~~~~r~i 121 (134)
T 3i7u_A 68 WYTLKG-----ERIFKTVKYYLMKYKEGEP-RPSWEVKDAKFFPIKEAKKLLKYKGDKEI 121 (134)
T ss_dssp EEEETT-----EEEEEEEEEEEEEEEEECC-CCCTTSSEEEEEEHHHHHHHBCSHHHHHH
T ss_pred EecCCC-----ceEEEEEEEEEEEEcCCcC-cCChhheEEEEEEHHHHhhhcCChHHHHH
Confidence 332211 1112245677776554322 344556899999999999874 3555544
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.91 E-value=1e-23 Score=150.47 Aligned_cols=127 Identities=16% Similarity=0.115 Sum_probs=82.7
Q ss_pred EEEEEEEeccCCcccccccccCceEEEEEEeCC-CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEee
Q 031268 24 VAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFR 102 (162)
Q Consensus 24 ~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~ 102 (162)
++|+|+|+... ...-.+++.+|||+++++ .+.|.||||++|+|||+.+||+||++||||+.+... ..++.+.+.
T Consensus 5 a~G~iifr~~~----~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~-~~~~~~~~~ 79 (155)
T 3u53_A 5 ACGLIIFRRCL----IPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQL-TIIEGFKRE 79 (155)
T ss_dssp EEEEEEEEECC----CSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGE-EEEEEEEEE
T ss_pred EeEEEEEcccc----ccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccc-eeeeeEeee
Confidence 67899997421 000112468999999875 467999999999999999999999999999997655 345544322
Q ss_pred cccccccCCCCCCceEEEEEEEEeccc-ccCCcccccceeEEeeHhHHhhhh-ccccccc
Q 031268 103 SKSRMNSCNSKEGGCRGYMFALEVTEE-LESWPEQANYKRIWVSNNHFLWRK-HSNLVGM 160 (162)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~~~~~~W~~~~ea~~~~-~~~l~~~ 160 (162)
..... ........+|.+..... ....++++..+++|++++|+.+++ .++++.+
T Consensus 80 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~ 134 (155)
T 3u53_A 80 LNYVA-----RNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAA 134 (155)
T ss_dssp EEEEE-----TTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHH
T ss_pred eecCC-----CcceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHH
Confidence 21110 01122344455544432 222334456889999999999874 3555444
No 3
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.88 E-value=2.7e-22 Score=139.75 Aligned_cols=113 Identities=16% Similarity=0.114 Sum_probs=80.1
Q ss_pred eeEEEEEEEeccCCcccccccccCceEEEEEEeCC-CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCC---CCee
Q 031268 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE---NPLG 97 (162)
Q Consensus 22 r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~---~~l~ 97 (162)
+.++++|+++.++ ++++|||++++. .+.|.||||++++|||+++||+||++||||+.+.... ..++
T Consensus 3 ~~~~~~vi~~~~~----------~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~ 72 (138)
T 1ktg_A 3 VKAAGLVIYRKLA----------GKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHE 72 (138)
T ss_dssp EEEEEEEEEEEET----------TEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEE
T ss_pred eEEEEEEEEEecC----------CCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccc
Confidence 4678899998653 357999999874 3579999999999999999999999999999644321 1223
Q ss_pred eEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
.+.+.... .....++|.+.........++.+..+++|++++++.++.
T Consensus 73 ~~~~~~~~---------~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 73 TLFYEAKG---------KPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp EEEEEETT---------EEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHH
T ss_pred eEEEEeCC---------CceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhh
Confidence 33333321 123567787776552222334455789999999999874
No 4
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.88 E-value=2.8e-22 Score=137.58 Aligned_cols=107 Identities=28% Similarity=0.240 Sum_probs=79.9
Q ss_pred eeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEe
Q 031268 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (162)
Q Consensus 22 r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~ 101 (162)
..++++|+++.+ ++|||++++. +.|.||||++++|||+.+||+||++||||+.+... ..++.+.+
T Consensus 2 ~~~~~~vi~~~~-------------~~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~ 66 (126)
T 1vcd_A 2 ELGAGGVVFNAK-------------REVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVL-LPLYPTRY 66 (126)
T ss_dssp EEEEEEEEECTT-------------SCEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEE-EEEEEEEE
T ss_pred eeEEEEEEEcCC-------------CEEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeec-cEEeEEEE
Confidence 357788888754 3899999876 78999999999999999999999999999998766 46777665
Q ss_pred ecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 102 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
..... ....++|.+...... ..++.+..+++|++++++.+++
T Consensus 67 ~~~~~---------~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~~ 108 (126)
T 1vcd_A 67 VNPKG---------VEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARALL 108 (126)
T ss_dssp ECTTS---------CEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHHB
T ss_pred ecCCc---------eEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHhh
Confidence 54211 234566666543322 2334455789999999999864
No 5
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.88 E-value=2e-22 Score=143.50 Aligned_cols=113 Identities=21% Similarity=0.222 Sum_probs=82.5
Q ss_pred ccccCceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccC
Q 031268 16 RYEDQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 92 (162)
Q Consensus 16 ~~~~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~ 92 (162)
++.......+++++++.+ ++|||+++.+ .+.|.||||++|+|||+++||+||++||||+.+...
T Consensus 14 ~~~~~~~~~v~~~i~~~~-------------~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~ 80 (156)
T 3gg6_A 14 RLRKNVCYVVLAVFLSEQ-------------DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE 80 (156)
T ss_dssp CCCTTCEEEEEEECBCTT-------------SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE
T ss_pred ccCCceEEEEEEEEEeCC-------------CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee
Confidence 555666677777777654 4899999976 577999999999999999999999999999998766
Q ss_pred CCCeeeEEeecccccccCCCCCCceEEEEEEEEecccccC---CcccccceeEEeeHhHHhhhhc
Q 031268 93 ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELES---WPEQANYKRIWVSNNHFLWRKH 154 (162)
Q Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~~~~~~~W~~~~ea~~~~~ 154 (162)
..++.+.... ....++|.+........ .++.+..+++|++++++.+++.
T Consensus 81 -~~~~~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 132 (156)
T 3gg6_A 81 -TLLSVEERGP------------SWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLR 132 (156)
T ss_dssp -EEEEEEESST------------TEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBS
T ss_pred -eEEEEEcCCC------------CEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCccccc
Confidence 4666654211 12445666655332111 2334567899999999998754
No 6
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.88 E-value=3.5e-22 Score=148.10 Aligned_cols=114 Identities=34% Similarity=0.544 Sum_probs=82.2
Q ss_pred ccCceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCe
Q 031268 18 EDQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 96 (162)
Q Consensus 18 ~~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l 96 (162)
..+++..+++|+++.++ +++|||+++.. .+.|.||||++|+|||+++||+||++||||+.+... ..+
T Consensus 36 ~~~~~~~~~~vi~~~~~-----------~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~-~~l 103 (194)
T 2fvv_A 36 GDGYKKRAACLCFRSES-----------EEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG-RLV 103 (194)
T ss_dssp TTSCEEEEEEEEESSTT-----------CCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE-EEE
T ss_pred cCCccccEEEEEEEECC-----------CCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccc-eEE
Confidence 35678888899886542 46999999865 478999999999999999999999999999998766 467
Q ss_pred eeEEeecccccccCCCCCCceEEEEEEEEecccccCCccc--ccceeEEeeHhHHhhhhc
Q 031268 97 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQ--ANYKRIWVSNNHFLWRKH 154 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~--~~~~~~W~~~~ea~~~~~ 154 (162)
+.+.+... ....++|.+.+.......+.. +..+++|++++++.+++.
T Consensus 104 ~~~~~~~~-----------~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~ 152 (194)
T 2fvv_A 104 GIFENQER-----------KHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQ 152 (194)
T ss_dssp EEEEETTT-----------TEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHT
T ss_pred EEEEcCCC-----------ceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHh
Confidence 77663221 124556666544322222211 235789999999998653
No 7
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.88 E-value=5.4e-22 Score=137.40 Aligned_cols=116 Identities=23% Similarity=0.238 Sum_probs=82.0
Q ss_pred eeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEe
Q 031268 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (162)
Q Consensus 22 r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~ 101 (162)
..+|++|+++ + ++|||++|.. +.|.||||++++|||+.+||+||++||||+.+... ..++.+.+
T Consensus 4 ~~~~~~vi~~-~-------------~~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~ 67 (134)
T 2pbt_A 4 EFSAGGVLFK-D-------------GEVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL-DYIGEIHY 67 (134)
T ss_dssp EEEEEEEEEE-T-------------TEEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEEE
T ss_pred ceEEEEEEEE-C-------------CEEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEe-eeeeEEEE
Confidence 3567777776 3 2899999877 88999999999999999999999999999998766 46676544
Q ss_pred ecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh-cccccc
Q 031268 102 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK-HSNLVG 159 (162)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~-~~~l~~ 159 (162)
...... .......++|.+........ +..+..+++|++++++.++. .+..+.
T Consensus 68 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~ 120 (134)
T 2pbt_A 68 WYTLKG-----ERIFKTVKYYLMKYKEGEPR-PSWEVKDAKFFPIKEAKKLLKYKGDKE 120 (134)
T ss_dssp EEEETT-----EEEEEEEEEEEEEEEEECCC-CCTTSSEEEEEEHHHHHHHCCSHHHHH
T ss_pred EeeCCC-----cEEEEEEEEEEEEecCCCcC-CCcceeEEEEEcHHHHHhhhcchhHHH
Confidence 333211 01123456777765543222 22256789999999999863 344333
No 8
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.87 E-value=1.2e-21 Score=138.52 Aligned_cols=122 Identities=20% Similarity=0.192 Sum_probs=82.0
Q ss_pred eEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCee-eEEe
Q 031268 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG-EWEF 101 (162)
Q Consensus 23 ~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~-~~~~ 101 (162)
.+|+++++...+ ++++|||++|...+.|.||||++|+|||+.+||+||++||||+.+......+. .+.+
T Consensus 6 ~~v~vvi~~~~~----------~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 75 (149)
T 3son_A 6 FQVLVIPFIKTE----------ANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASI 75 (149)
T ss_dssp CEEEEEEEEECS----------SSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEE
T ss_pred eEEEEEEEEecC----------CCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecc
Confidence 467778876543 36899999998888999999999999999999999999999998764311121 1222
Q ss_pred ecccccccCCCCCCceEEEEEEEEecc--cccCCcccccceeEEeeHhHHhhhh-ccccc
Q 031268 102 RSKSRMNSCNSKEGGCRGYMFALEVTE--ELESWPEQANYKRIWVSNNHFLWRK-HSNLV 158 (162)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~~~~~~~W~~~~ea~~~~-~~~l~ 158 (162)
...... + ........++|.+.... ..... ..+..+++|++++++.++. .+..+
T Consensus 76 ~~~~~~--~-~~~~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~~~~~~~~ 131 (149)
T 3son_A 76 PNFHFS--F-NKPYVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQLLEWDSNK 131 (149)
T ss_dssp EGGGTC--S-SSCSEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHHCCCHHHH
T ss_pred cceeec--c-CCceEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHHhcCHHHH
Confidence 211110 0 01123456778887762 22222 3456889999999999873 34433
No 9
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.87 E-value=1.5e-22 Score=148.78 Aligned_cols=126 Identities=15% Similarity=0.128 Sum_probs=84.8
Q ss_pred ccccCceeEEEEEEEeccCCcccccccccC----ceEEEEEEeC----------CCCCeeeCCCccCCCCCHHHHHHHHH
Q 031268 16 RYEDQLRLVAGCIPYKFEKNDENKNCKMEK----KVLVLMISTP----------NRDDLVFPKGGWEDDETVSEAACREA 81 (162)
Q Consensus 16 ~~~~~~r~~v~~i~~~~~~~~~~~~~~~~~----~~~vLLv~r~----------~~~~W~lPgG~ve~gEt~~eaa~REl 81 (162)
+|....+++|+++++..++ + +++|||++|. ..+.|.||||++|+|||+++||+||+
T Consensus 21 ~~~~p~~~~v~~vv~~~~~----------~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl 90 (187)
T 3i9x_A 21 EFRTPDGYTSDMILTTVKE----------LNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAEREL 90 (187)
T ss_dssp --CCCSEEEEEEEEEEEEE----------ETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHH
T ss_pred HcCCcccceEEEEEEEEcC----------CCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHH
Confidence 3445556999999998764 3 4799999992 35679999999999999999999999
Q ss_pred HHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEEEEecccc--cCCcccccceeEEeeHhHHhhh-hccccc
Q 031268 82 LEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--ESWPEQANYKRIWVSNNHFLWR-KHSNLV 158 (162)
Q Consensus 82 ~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~~~~~~W~~~~ea~~~-~~~~l~ 158 (162)
+||||+.+... ..++.+.+..... .......+|.+.+.... ...+..+..+++|++++++.++ +....+
T Consensus 91 ~EEtGl~~~~~-~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~ 162 (187)
T 3i9x_A 91 EEETSLTDIPL-IPFGVFDKPGRDP-------RGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHL 162 (187)
T ss_dssp HHHHCCCSCCC-EEEEEECCTTSST-------TSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHH
T ss_pred HHHHCCCCcce-EEEEEEcCCccCC-------CCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHH
Confidence 99999988766 4677665433221 11223334444333221 1122344578999999999875 444443
Q ss_pred c
Q 031268 159 G 159 (162)
Q Consensus 159 ~ 159 (162)
.
T Consensus 163 ~ 163 (187)
T 3i9x_A 163 D 163 (187)
T ss_dssp H
T ss_pred H
Confidence 3
No 10
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.87 E-value=1.9e-21 Score=138.14 Aligned_cols=109 Identities=17% Similarity=0.182 Sum_probs=81.0
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCCC-----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCC
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN 94 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~-----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~ 94 (162)
.++.+|++|+++.+ ++|||++|... +.|.||||++|+|||+.+||+||++||||+.+... .
T Consensus 6 ~~~~~v~~vi~~~~-------------~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~-~ 71 (153)
T 3grn_A 6 PYIISVYALIRNEK-------------GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPG-D 71 (153)
T ss_dssp CEEEEEEEEEECTT-------------CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC-S
T ss_pred ceEEEEEEEEEcCC-------------CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecc-e
Confidence 45677888887654 48999998753 67999999999999999999999999999998766 5
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
.++.+.+..... ....++|.+........ +..+..+++|++++++.++
T Consensus 72 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 72 IAGQVNFELTEK---------KVIAIVFDGGYVVADVK-LSYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp EEEEEEEECSSC---------EEEEEEEEEEECCCCCC-CCTTEEEEEEECHHHHTTC
T ss_pred EEEEEEEecCCc---------eEEEEEEEEEecCCcEe-cCCCcceEEEEEHHHhhhc
Confidence 777766544321 23456666654432222 2344578999999999886
No 11
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.86 E-value=2.6e-21 Score=137.85 Aligned_cols=127 Identities=19% Similarity=0.192 Sum_probs=85.5
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccc--cCCC
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGL--LDEN 94 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~--~~~~ 94 (162)
.++.+|++|+++.+ ++|||++|.. .+.|.||||++++|||+.+||+||++||||+.+. .. .
T Consensus 16 ~~~~~v~~vi~~~~-------------~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~ 81 (160)
T 1rya_A 16 TPLVSLDFIVENSR-------------GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAG-Q 81 (160)
T ss_dssp SCEEEEEEEEECTT-------------SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGS-E
T ss_pred CcEEEEEEEEEcCC-------------CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccc-e
Confidence 45678888888643 4799999976 4679999999999999999999999999999853 33 4
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh--hcccccccc
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR--KHSNLVGMI 161 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~--~~~~l~~~v 161 (162)
.++.+.+....... ..........++|.+............+..+++|++++++.++ ..+.+++++
T Consensus 82 ~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l 149 (160)
T 1rya_A 82 FYGVWQHFYDDNFS-GTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYF 149 (160)
T ss_dssp EEEEEEEEESSBTT-BSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHCTTBCHHHHGGG
T ss_pred EEEEEeEEEccccc-CCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhccccCHHHHHHH
Confidence 56666543321100 0000112345677776654322223345578999999999975 455555543
No 12
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.86 E-value=1.1e-21 Score=140.26 Aligned_cols=120 Identities=15% Similarity=0.075 Sum_probs=85.3
Q ss_pred cCceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCC
Q 031268 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 95 (162)
Q Consensus 19 ~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~ 95 (162)
..++.+|++|+++ + ++|||++|.+ .+.|.||||++|+|||+.+||+||++||||+.+... ..
T Consensus 26 ~~~~~~v~~vi~~-~-------------~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~ 90 (157)
T 4dyw_A 26 EQPRVGCGAAIVR-D-------------GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERA-TL 90 (157)
T ss_dssp CCCEEEEEEEEEE-T-------------TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESC-EE
T ss_pred CCceeEEEEEEEE-C-------------CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccC-cE
Confidence 3467888888887 3 3899999973 467999999999999999999999999999998766 56
Q ss_pred eeeEEeecccccccCCCCCCceEEEEEEEEeccccc-CCcccccceeEEeeHhHHhhhhccccccc
Q 031268 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELE-SWPEQANYKRIWVSNNHFLWRKHSNLVGM 160 (162)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~~~~~~~W~~~~ea~~~~~~~l~~~ 160 (162)
++.+.+..... ......++|.+....... .....+..+++|++++++.+.+.+..+.+
T Consensus 91 ~~~~~~~~~~~-------~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~l~~~~~~~ 149 (157)
T 4dyw_A 91 LCVVDHIDAAN-------GEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQPLTHATRIA 149 (157)
T ss_dssp EEEEEEEETTT-------TEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCSSBCHHHHHH
T ss_pred EEEEEeeccCC-------CcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHcccccCHHHHHH
Confidence 77665544211 112244566664433222 22234457899999999988765555443
No 13
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.86 E-value=2.8e-21 Score=135.07 Aligned_cols=113 Identities=19% Similarity=0.143 Sum_probs=81.5
Q ss_pred CceeEEEEEEEeccCCcccccccccCceE--EEEEEeCCC-CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCe
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVL--VLMISTPNR-DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 96 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~--vLLv~r~~~-~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l 96 (162)
.++.+|++|+++.+. +++ |||++|... +.|.||||++++|||+.+||+||++||||+.+... ..+
T Consensus 7 ~p~~~v~~vi~~~~~-----------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~ 74 (139)
T 2yyh_A 7 TPLLATDVIIRLWDG-----------ENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLH-KLM 74 (139)
T ss_dssp CCEEEEEEEEEEEET-----------TEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE-EEE
T ss_pred CCeEEEEEEEEEEcC-----------CCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccc-eEE
Confidence 457889999998543 356 999998754 45999999999999999999999999999997765 456
Q ss_pred eeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHh--hhh
Q 031268 97 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFL--WRK 153 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~--~~~ 153 (162)
+.+.+.... .......++|.+...+. ..+..+..+++|++++++. .+.
T Consensus 75 ~~~~~~~~~-------~~~~~~~~~f~~~~~~~--~~~~~e~~~~~W~~~~el~~~~l~ 124 (139)
T 2yyh_A 75 GVYSDPERD-------PRAHVVSVVWIGDAQGE--PKAGSDAKKVKVYRLEEIPLDKLV 124 (139)
T ss_dssp EEECCTTSC-------TTSCEEEEEEEEEEESC--CCCCTTEEEEEEECTTSCCGGGBC
T ss_pred EEECCCCcC-------CCceEEEEEEEEecCCc--cCCCCCcceEEEEEHHHCCHhhcC
Confidence 655433221 11234566777776332 2233445789999999998 553
No 14
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.86 E-value=3.7e-21 Score=138.96 Aligned_cols=117 Identities=21% Similarity=0.168 Sum_probs=79.0
Q ss_pred cCceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCee
Q 031268 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (162)
Q Consensus 19 ~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~ 97 (162)
..++..|++|+++. ++|||++|.. .+.|.||||++|+|||+.+||+||++||||+.+... ..++
T Consensus 20 ~~~~~~v~~ii~~~--------------~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~ 84 (171)
T 3id9_A 20 NIMQVRVTGILIED--------------EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIK-KLLY 84 (171)
T ss_dssp --CEEEEEEEEEET--------------TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEE
T ss_pred CceEEEEEEEEEEC--------------CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccc-eEEE
Confidence 34567787777763 3899999876 678999999999999999999999999999998765 4666
Q ss_pred eEEeecccccccCCCCCCceEEEEEEEEecccccCC-----cccccceeEEeeHhHHhhh-hcccccc
Q 031268 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESW-----PEQANYKRIWVSNNHFLWR-KHSNLVG 159 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-----~~~~~~~~~W~~~~ea~~~-~~~~l~~ 159 (162)
.+.+..... .....+|.+......... ...+..+++|++++++.++ +.+.++.
T Consensus 85 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~ 143 (171)
T 3id9_A 85 VCDKPDASP---------SLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFIN 143 (171)
T ss_dssp EEEETTSSS---------CEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSH
T ss_pred EEcccCCCC---------cEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHH
Confidence 665443221 123445555543321111 2234578999999999986 4444443
No 15
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.86 E-value=4.5e-21 Score=135.93 Aligned_cols=94 Identities=22% Similarity=0.279 Sum_probs=70.4
Q ss_pred eEEEEEEeC--CCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEEE
Q 031268 47 VLVLMISTP--NRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFAL 124 (162)
Q Consensus 47 ~~vLLv~r~--~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 124 (162)
++|||++|. ..+.|.||||++|+|||+.+||+||++||||+.+... ..++.+.+..... .....++|.+
T Consensus 16 ~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~--------~~~~~~~f~~ 86 (153)
T 3shd_A 16 GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQ-HFIRMHQWIAPDK--------TPFLRFLFAI 86 (153)
T ss_dssp TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC-EEEEEEEECCTTS--------CCEEEEEEEE
T ss_pred CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccC-cEEEEEEEecCCC--------ceEEEEEEEE
Confidence 389999984 3456999999999999999999999999999998766 5677665544321 1234577877
Q ss_pred Eecccc-cCCcccccceeEEeeHhHH
Q 031268 125 EVTEEL-ESWPEQANYKRIWVSNNHF 149 (162)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~W~~~~ea 149 (162)
...... ....+.+..+++|++++++
T Consensus 87 ~~~~~~~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 87 ELEQICPTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp ECSSCCCCCCCSTTCCEEEEECHHHH
T ss_pred EccccCcCCCCcccceeeEEecHHHh
Confidence 765532 2223445688999999999
No 16
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.86 E-value=7.6e-21 Score=133.07 Aligned_cols=101 Identities=16% Similarity=0.046 Sum_probs=72.8
Q ss_pred eEEEEEEeCC------CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEE
Q 031268 47 VLVLMISTPN------RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGY 120 (162)
Q Consensus 47 ~~vLLv~r~~------~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 120 (162)
++|||++|.. .+.|.||||++++|||+.+||+||++||||+.+... ..++.+.+.... .....+
T Consensus 17 ~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~-~~~~~~~~~~~~---------~~~~~~ 86 (140)
T 3gwy_A 17 EKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVG-EKLLTVHHTYPD---------FEITMH 86 (140)
T ss_dssp TEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEEEEECCCSS---------CCEEEE
T ss_pred CEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEec-eEEEEEEEEeCC---------ceEEEE
Confidence 3899999864 356999999999999999999999999999998766 466666544332 123567
Q ss_pred EEEEEecccccCCcccccceeEEeeHhHHhhh-hcccccc
Q 031268 121 MFALEVTEELESWPEQANYKRIWVSNNHFLWR-KHSNLVG 159 (162)
Q Consensus 121 ~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~-~~~~l~~ 159 (162)
+|.+....... ...+..+++|++++++.++ +.+..+.
T Consensus 87 ~f~~~~~~~~~--~~~E~~~~~W~~~~el~~~~~~~~~~~ 124 (140)
T 3gwy_A 87 AFLCHPVGQRY--VLKEHIAAQWLSTREMAILDWAEADKP 124 (140)
T ss_dssp EEEEEECCSCC--CCCSSCEEEEECHHHHTTSCBCGGGHH
T ss_pred EEEEEecCCcc--cccccceeEeccHHHHhhCCCCcccHH
Confidence 78777654322 2234578999999999987 4444443
No 17
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.85 E-value=7.1e-21 Score=140.89 Aligned_cols=131 Identities=15% Similarity=0.152 Sum_probs=80.0
Q ss_pred ccccCceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcc-cccCCC
Q 031268 16 RYEDQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVR-GLLDEN 94 (162)
Q Consensus 16 ~~~~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~-~~~~~~ 94 (162)
|.....+.++++++++.+ +++|||++++..+.|.||||++|+|||+.+||+||++||||+. +.....
T Consensus 39 r~~~~~h~~~~~vv~~~~------------~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~ 106 (197)
T 3fcm_A 39 RDNTIAHLTSSAFAVNKE------------RNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLD 106 (197)
T ss_dssp TTCSSEEEEEEEEEECTT------------SCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCS
T ss_pred ccCCCccEEEEEEEEECC------------CCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCC
Confidence 333466788888888765 2599999998888999999999999999999999999999998 543211
Q ss_pred CeeeEEe---ecccccccCCCCCCceEEEEEEEEeccccc-CCcccccceeEEeeHhHHhhhh-cccccc
Q 031268 95 PLGEWEF---RSKSRMNSCNSKEGGCRGYMFALEVTEELE-SWPEQANYKRIWVSNNHFLWRK-HSNLVG 159 (162)
Q Consensus 95 ~l~~~~~---~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~~~~~~~W~~~~ea~~~~-~~~l~~ 159 (162)
.+..+.+ .......... ....+...+|.+....... .....+..+++|++++++.+++ .++++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~ 175 (197)
T 3fcm_A 107 KAFALDVLTVNGHIKRGKYV-SSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSEPHMIP 175 (197)
T ss_dssp SCSEEEEEEECCEEETTEEE-CCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCCGGGHH
T ss_pred CceEEEEeeecCccccCccc-CCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCCHHHHH
Confidence 2222221 1110000000 0001112445555443222 2233456789999999999874 444443
No 18
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.85 E-value=5.2e-21 Score=136.74 Aligned_cols=118 Identities=19% Similarity=0.077 Sum_probs=79.1
Q ss_pred ceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEE
Q 031268 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE 100 (162)
Q Consensus 21 ~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~ 100 (162)
.+.+|++|+++ + ++|||++++..+.|.||||++|+|||+.+||+||++||||+.+... ..++.+.
T Consensus 5 ~~~~v~~vi~~-~-------------~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~ 69 (159)
T 3f6a_A 5 RHFTVSVFIVC-K-------------DKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLY-NPIDINL 69 (159)
T ss_dssp SCEEEEEEEEE-T-------------TEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEEC-CCCCHHH
T ss_pred ceEEEEEEEEE-C-------------CEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceec-ccccccc
Confidence 35677888887 3 3899999988889999999999999999999999999999998766 3454221
Q ss_pred -----------eecccccccC-CCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 101 -----------FRSKSRMNSC-NSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 101 -----------~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
+......... ......+..++|.+..........+.+..+++|++++++.++.
T Consensus 70 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 134 (159)
T 3f6a_A 70 KKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAH 134 (159)
T ss_dssp HHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCS
T ss_pred cccccccccccccCccccccccCCCCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCc
Confidence 0000000000 0001122345677766543333334456789999999998873
No 19
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.85 E-value=1.4e-21 Score=139.06 Aligned_cols=117 Identities=19% Similarity=0.093 Sum_probs=72.4
Q ss_pred ceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEE
Q 031268 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE 100 (162)
Q Consensus 21 ~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~ 100 (162)
.+.+|++|+++.+ ++|||++|. .+.|.||||++|+|||+.+||+||++||||+.+... ..++.+.
T Consensus 20 ~~~~v~~ii~~~~-------------~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~ 84 (153)
T 3eds_A 20 FXPSVAAVIKNEQ-------------GEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVK-KQKGVFG 84 (153)
T ss_dssp EEEEEEEEEBCTT-------------CCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEE-EEEEEEC
T ss_pred EeeeEEEEEEcCC-------------CeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceee-eEEEEec
Confidence 3556666666533 589998887 778999999999999999999999999999998766 4666552
Q ss_pred eecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 101 FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
........ ..+.......++|.+..........+.+..+++|++++++.++.
T Consensus 85 ~~~~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~ 136 (153)
T 3eds_A 85 GKEYRYTY-SNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLA 136 (153)
T ss_dssp SGGGEEEC-TTSCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCCBS
T ss_pred ccceeeec-CCCCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCchhc
Confidence 11100000 00011122456677765443333334455789999999999873
No 20
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.85 E-value=2e-21 Score=137.15 Aligned_cols=109 Identities=19% Similarity=0.090 Sum_probs=70.5
Q ss_pred eEEEEEEEeccCCcccccccccCceEEEEEEeCCC----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeee
Q 031268 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 98 (162)
Q Consensus 23 ~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~ 98 (162)
.+|++++++.+ ++|||+++++. +.|.||||++|+|||+++||+||++||||+.+... ..++.
T Consensus 6 ~~v~vi~~~~~-------------~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~-~~l~~ 71 (145)
T 2w4e_A 6 RAVFILPVTAQ-------------GEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEW-VPLPG 71 (145)
T ss_dssp EEEEEEEEETT-------------SEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEE-EECCC
T ss_pred CEEEEEEEcCC-------------CEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeE-EEEec
Confidence 46777887654 37999876432 26999999999999999999999999999987644 34444
Q ss_pred EEeecccccccCCCCCCceEEEEEEEEe-cccccCCcccccceeEEeeHhHHhhhhc
Q 031268 99 WEFRSKSRMNSCNSKEGGCRGYMFALEV-TEELESWPEQANYKRIWVSNNHFLWRKH 154 (162)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~~~~~~~~W~~~~ea~~~~~ 154 (162)
+.. ... ......++|.+.. ........+.+..+++|++++++.+++.
T Consensus 72 ~~~-~~~--------~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 119 (145)
T 2w4e_A 72 FYP-QPS--------ISGVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLE 119 (145)
T ss_dssp BBS-CTT--------TCCCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHH
T ss_pred CcC-CCC--------ccCceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHH
Confidence 321 111 1112455665542 2111122344457899999999998754
No 21
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.85 E-value=3.3e-21 Score=143.77 Aligned_cols=120 Identities=12% Similarity=0.081 Sum_probs=82.4
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeE
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW 99 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~ 99 (162)
.++..|++++++ + ++|||+++...+.|.||||++|+|||+.+||+||++||||+.+... ..++.+
T Consensus 66 ~~~~~v~~vv~~-~-------------~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~-~~l~~~ 130 (205)
T 3q1p_A 66 TPKVDIRAVVFQ-N-------------EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHF-KLLAIF 130 (205)
T ss_dssp CCEEEEEEEEEE-T-------------TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEE
T ss_pred CCcceEEEEEEE-C-------------CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccc-eEEEEE
Confidence 346778888886 3 3899999987788999999999999999999999999999998766 466766
Q ss_pred EeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh-cccccc
Q 031268 100 EFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK-HSNLVG 159 (162)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~-~~~l~~ 159 (162)
........ +.......++|.+....... .++.+..+++|++++++.++. .+..++
T Consensus 131 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w~~~~el~~l~~~~~~~~ 186 (205)
T 3q1p_A 131 DKEKHQPS----PSATHVYKIFIGCEIIGGEK-KTSIETEEVEFFGENELPNLSIARNTED 186 (205)
T ss_dssp EHHHHSCC----CCSSCEEEEEEEEEEEEECC-CCCTTSCCEEEECTTSCCCBCTTTCCHH
T ss_pred eccccCCC----CCCceEEEEEEEEEecCCcc-CCCCcceEEEEEeHHHhhhcCCCccHHH
Confidence 54322110 01122345666666543322 233456889999999998773 444433
No 22
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.85 E-value=1.1e-20 Score=134.53 Aligned_cols=115 Identities=21% Similarity=0.101 Sum_probs=82.3
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-------CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccC
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-------RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 92 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-------~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~ 92 (162)
..+.++++|+++.+ ++|||++|.. .+.|.||||++|+|||+.+||+||++||||+.+...
T Consensus 11 ~~~~~~~~vi~~~~-------------~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~ 77 (159)
T 1sjy_A 11 VELRAAGVVLLNER-------------GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPV 77 (159)
T ss_dssp CCEEEEEEEEBCTT-------------CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEE
T ss_pred eEEEeEEEEEEeCC-------------CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceee
Confidence 34566777777543 4799999874 367999999999999999999999999999998765
Q ss_pred CCCeeeEEeecccccccCCCCCCceEEEEEEEEecccc-cCC-cccccceeEEeeHhHHhhhhccc
Q 031268 93 ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL-ESW-PEQANYKRIWVSNNHFLWRKHSN 156 (162)
Q Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~-~~~~~~~~~W~~~~ea~~~~~~~ 156 (162)
..++.+.+..... .....++|.+...... ... .+.+..+++|++++++.+++.++
T Consensus 78 -~~l~~~~~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 78 -KFLGAYLGRFPDG--------VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp -EEEEEEEEECTTS--------CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred -EEEEEEecccCCC--------ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 4667665432110 1235677777764432 222 33445789999999999885443
No 23
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.85 E-value=7.3e-21 Score=136.48 Aligned_cols=119 Identities=22% Similarity=0.206 Sum_probs=82.5
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCCC---CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCe
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR---DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 96 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~---~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l 96 (162)
..+.++.+++++.+ .++|||++|... +.|+||||++++|||+.+||+||++||||+.+... ..+
T Consensus 8 ~~~~~v~~vi~~~~------------~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~ 74 (161)
T 3exq_A 8 PVELVTMVMVTDPE------------TQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGV-TFC 74 (161)
T ss_dssp CEEEEEEEEEBCTT------------TCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCC-EEE
T ss_pred CceEEEEEEEEeCC------------CCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCC-cEE
Confidence 35667777776654 258999988743 45889999999999999999999999999998766 577
Q ss_pred eeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh-hccccccc
Q 031268 97 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR-KHSNLVGM 160 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~-~~~~l~~~ 160 (162)
+.+.+..... ......++|.+...... ....+..+++|++++++.++ +.+.++.+
T Consensus 75 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~ 130 (161)
T 3exq_A 75 GTCEWFDDDR-------QHRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRENSAASLPEF 130 (161)
T ss_dssp EEEEEECSSC-------SSEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTTTBCTTHHHH
T ss_pred EEEecccCCC-------CeEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhCccChHHHHH
Confidence 7776554221 11234566665443322 22334468999999999886 44554443
No 24
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.85 E-value=1.1e-20 Score=137.74 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=70.1
Q ss_pred eEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEE
Q 031268 47 VLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 123 (162)
Q Consensus 47 ~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~ 123 (162)
++|||++|.. .+.|.||||++|+|||+++||+||++||||+.+... ..++.+.+..... ......++|.
T Consensus 36 ~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~l~~~~~~~~~~-------~~~~~~~~f~ 107 (176)
T 3q93_A 36 QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDAL-HKVGQIVFEFVGE-------PELMDVHVFC 107 (176)
T ss_dssp SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCC-EEEEEEEEEETTC-------SCEEEEEEEE
T ss_pred CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceee-EEEEEEEEEcCCC-------CcEEEEEEEE
Confidence 4899998865 467999999999999999999999999999998766 5777776554321 1123456676
Q ss_pred EEecccccCCcccccceeEEeeHhHHhhh
Q 031268 124 LEVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
+....... ...+..+++|++++++.++
T Consensus 108 ~~~~~~~~--~~~e~~~~~W~~~~el~~~ 134 (176)
T 3q93_A 108 TDSIQGTP--VESDEMRPCWFQLDQIPFK 134 (176)
T ss_dssp ESCEESCC--CCCSSEEEEEEETTCCCGG
T ss_pred EECCCCCc--CCCcceeeEEeeHHHcccc
Confidence 64332211 2223467799999999865
No 25
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.85 E-value=1.9e-20 Score=135.03 Aligned_cols=120 Identities=19% Similarity=0.182 Sum_probs=81.7
Q ss_pred cCceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeee
Q 031268 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 98 (162)
Q Consensus 19 ~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~ 98 (162)
..+|.+|++++++.+ ++|||+++...+.|.||||++++|||+.+||+||++||||+.+... ..++.
T Consensus 5 ~~~~~~v~~~i~~~~-------------~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~-~~~~~ 70 (164)
T 2kdv_A 5 DGYRPNVGIVICNRQ-------------GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDV-RILAS 70 (164)
T ss_dssp SSEEEEEEEEEECTT-------------SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGE-EEEEE
T ss_pred CCCCcEEEEEEEccC-------------CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccce-EEEEE
Confidence 357888989988754 4899999987788999999999999999999999999999997655 45555
Q ss_pred EE----eecccccccC--CCCCCceEEEEEEEEeccccc--C---CcccccceeEEeeHhHHhhh
Q 031268 99 WE----FRSKSRMNSC--NSKEGGCRGYMFALEVTEELE--S---WPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 99 ~~----~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~~--~---~~~~~~~~~~W~~~~ea~~~ 152 (162)
+. |......... .........++|.+....... . .++.+..+++|++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 71 TRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp CSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred ecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhh
Confidence 32 2221110000 000112245778877653211 1 12335678999999998764
No 26
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.85 E-value=1.1e-20 Score=133.62 Aligned_cols=98 Identities=21% Similarity=0.240 Sum_probs=71.3
Q ss_pred eEEEEEEeCCCC---CeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEE
Q 031268 47 VLVLMISTPNRD---DLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 123 (162)
Q Consensus 47 ~~vLLv~r~~~~---~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~ 123 (162)
++|||+++...+ .|.||||++|+|||+.+||+||++||||+.+... ..++.+.+..... ......++|.
T Consensus 19 ~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~-------~~~~~~~~f~ 90 (153)
T 2b0v_A 19 DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPE-VLTGIYHWTCASN-------GTTYLRFTFS 90 (153)
T ss_dssp TEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEE-EEEEEEEEEETTT-------TEEEEEEEEE
T ss_pred CEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccc-eEEEEEEEeCCCC-------CcEEEEEEEE
Confidence 389999987544 6999999999999999999999999999998766 5677665544321 1122345676
Q ss_pred EEeccccc-CCcccccceeEEeeHhHHhhh
Q 031268 124 LEVTEELE-SWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 124 ~~~~~~~~-~~~~~~~~~~~W~~~~ea~~~ 152 (162)
+....... ...+.+..+++|++++++.++
T Consensus 91 ~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 91 GQVVSFDPDRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEEEECTTSCCCTTEEEEEEEEHHHHHHT
T ss_pred EEeCCCCCCCCCCCCeeeEEEecHHHHhhh
Confidence 66543222 223444578999999999985
No 27
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.85 E-value=2.7e-20 Score=130.87 Aligned_cols=123 Identities=18% Similarity=0.107 Sum_probs=80.8
Q ss_pred eEEEEEEEeccCCcccccccccCceEEEEEEeCC-CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCC-CCeeeEE
Q 031268 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE-NPLGEWE 100 (162)
Q Consensus 23 ~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~-~~l~~~~ 100 (162)
.+|++++++.+ +++|||++++. .+.|.||||++|+|||+.+||+||++||||+.+.... ..++.+.
T Consensus 10 ~~v~~~i~~~~------------~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 77 (150)
T 2o1c_A 10 VSILVVIYAQD------------TKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQR 77 (150)
T ss_dssp EEEEEEEEETT------------TCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEE
T ss_pred eEEEEEEEeCC------------CCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeec
Confidence 57888888754 25899999876 5789999999999999999999999999999976531 2333322
Q ss_pred ee-----cccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh-hcccccc
Q 031268 101 FR-----SKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR-KHSNLVG 159 (162)
Q Consensus 101 ~~-----~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~-~~~~l~~ 159 (162)
.. ..... .++........++|.+........ ...+..+++|++++++.++ ..+..+.
T Consensus 78 ~~~~~~~~~~~~-~~~~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~ 140 (150)
T 2o1c_A 78 TVEFEIFSHLRH-RYAPGVTRNTESWFCLALPHERQI-VFTEHLAYKWLDAPAAAALTKSWSNRQ 140 (150)
T ss_dssp EEEEECCGGGGG-GBCTTCCEEEEEEEEEEESSCCCC-CCSSSSCEEEEEHHHHHHHCSCHHHHH
T ss_pred eeeeeeeccccc-ccCCCCcceEEEEEEEEcCCCCCc-ChhHhhccEeecHHHHHhhhcCHHHHH
Confidence 11 00000 000011234567787776543222 2244578999999999987 3344333
No 28
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.84 E-value=2.6e-21 Score=146.52 Aligned_cols=116 Identities=16% Similarity=0.189 Sum_probs=82.8
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCe
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 96 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l 96 (162)
.++.+|++|++..++ ++++|||++|.. .+.|.||||++|+|||+++||+||++||||+.+... ..+
T Consensus 11 ~p~v~v~~vi~~~~~----------~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~-~~l 79 (226)
T 2fb1_A 11 TFYLGIDCIIFGFNE----------GEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYM-EQV 79 (226)
T ss_dssp CEEEEEEEEEEEEET----------TEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEE-EEE
T ss_pred CCeEEEEEEEEEEeC----------CCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCce-EEE
Confidence 457889999997543 368999999875 467999999999999999999999999999998765 467
Q ss_pred eeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 97 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
+.+....... .......+|.+.+.......+..+..+++|++++++.++.
T Consensus 80 ~~~~~~~r~~-------~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~ 129 (226)
T 2fb1_A 80 GAFGAIDRDP-------GERVVSIAYYALININEYDRELVQKHNAYWVNINELPALI 129 (226)
T ss_dssp EEECCTTSSS-------SSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCBS
T ss_pred EEeCCCCcCC-------CceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhcc
Confidence 7665332211 1223344566655432221222345789999999998764
No 29
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.84 E-value=1.3e-20 Score=132.52 Aligned_cols=112 Identities=25% Similarity=0.331 Sum_probs=78.0
Q ss_pred ceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEE
Q 031268 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE 100 (162)
Q Consensus 21 ~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~ 100 (162)
.+..+++|+++.+ +++|||+++. .+.|.||||++++|||+++||+||++||||+.+... ..++.+.
T Consensus 17 ~~~~~~~vi~~~~------------~~~vLl~~r~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~ 82 (148)
T 2azw_A 17 TRYAAYIIVSKPE------------NNTMVLVQAP-NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIG-CYLGEAD 82 (148)
T ss_dssp ECCEEEEECEEGG------------GTEEEEEECT-TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEE
T ss_pred eeeEEEEEEECCC------------CCeEEEEEcC-CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEee-eEEEEEE
Confidence 4567778888753 3589999874 478999999999999999999999999999998765 4566543
Q ss_pred ---eecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 101 ---FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 101 ---~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
+...... ......++|.+........ +..+..+++|++++++.+++
T Consensus 83 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~ 131 (148)
T 2azw_A 83 EYFYSNHRQT------AYYNPGYFYVANTWRQLSE-PLERTNTLHWVAPEEAVRLL 131 (148)
T ss_dssp EEEEETTTTE------EEEEEEEEEEEEEEEECSS-CC-CCSEEEEECHHHHHHHB
T ss_pred EEEcCCCCCc------ceEEEEEEEEEEcCcCCcC-CCCceeeEEEeeHHHHHhhh
Confidence 2211100 0112456677665433222 22345689999999999874
No 30
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.84 E-value=2.1e-20 Score=138.67 Aligned_cols=112 Identities=15% Similarity=0.224 Sum_probs=73.6
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC--CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCee
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN--RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~--~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~ 97 (162)
..+..|++++++.++ ++|||++++. .+.|.||||++|+|||+++||+||++||||+.+... ..++
T Consensus 24 ~~~v~v~~~v~~~~~------------~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~-~l~~ 90 (199)
T 3h95_A 24 SHQVGVAGAVFDEST------------RKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFR-SVLS 90 (199)
T ss_dssp --CCEEEEEEEETTT------------TEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEE
T ss_pred cccceEEEEEEeCCC------------CEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccc-eEEE
Confidence 446777788887642 5999999876 578999999999999999999999999999997754 3444
Q ss_pred eEE-eecccccccCCCCCCceEEEEEEEEec--ccccCCcccccceeEEeeHhHHhhh
Q 031268 98 EWE-FRSKSRMNSCNSKEGGCRGYMFALEVT--EELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 98 ~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
... +..... ......+|.+.+. .......+.+..+++|++++++.++
T Consensus 91 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 140 (199)
T 3h95_A 91 IRQQHTNPGA--------FGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKT 140 (199)
T ss_dssp EEECC-----------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHC
T ss_pred EEeeecCCCC--------ceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhh
Confidence 322 111110 0112233333332 2222223445688999999999975
No 31
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.84 E-value=1.6e-20 Score=138.26 Aligned_cols=112 Identities=21% Similarity=0.251 Sum_probs=80.6
Q ss_pred ceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCee
Q 031268 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (162)
Q Consensus 21 ~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~ 97 (162)
++.+|++|+++ + ++|||+++.. .+.|.||||++|+|||+++||+||++||||+.+... ..++
T Consensus 39 ~~~~v~~ii~~-~-------------~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~ 103 (189)
T 3cng_A 39 PKVIVGCIPEW-E-------------NKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIR-ELYA 103 (189)
T ss_dssp CEEEEEEEEEE-T-------------TEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEE
T ss_pred CceEEEEEEEe-C-------------CEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccc-eeEE
Confidence 45678788876 3 3899999875 567999999999999999999999999999997755 3555
Q ss_pred eEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHh--hhhcccccc
Q 031268 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFL--WRKHSNLVG 159 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~--~~~~~~l~~ 159 (162)
.+.+... ....++|.+....... .++.+..+++|++++++. .+..+.+++
T Consensus 104 ~~~~~~~-----------~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~l~~~~~~~ 155 (189)
T 3cng_A 104 VYSLPHI-----------SQVYMLFRAKLLDLDF-FPGIESLEVRLFGEQEIPWNDIAFRVIHD 155 (189)
T ss_dssp EEEEGGG-----------TEEEEEEEEEECCSCC-CCCTTEEEEEEECTTTCCGGGBSCHHHHH
T ss_pred EEecCCC-----------cEEEEEEEEEeCCCcc-CCCccceeEEEECHHHcCcccccChHHHH
Confidence 5544321 1256677776654322 234455789999999998 444444433
No 32
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.84 E-value=5.3e-20 Score=131.21 Aligned_cols=100 Identities=20% Similarity=0.076 Sum_probs=69.5
Q ss_pred eEEEEEEeCCC----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCC--eeeEEeecccccccCCCCCCceEEE
Q 031268 47 VLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP--LGEWEFRSKSRMNSCNSKEGGCRGY 120 (162)
Q Consensus 47 ~~vLLv~r~~~----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~ 120 (162)
++|||++|... +.|.||||++|+|||+.+||+||++||||+.+... .. ++.+.+.... .....+
T Consensus 41 ~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~~---------~~~~~~ 110 (158)
T 3hhj_A 41 NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQAD-NLFPLTFASHGYET---------FHLLMP 110 (158)
T ss_dssp SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGG-GCEEEEEEEEECSS---------CEEEEE
T ss_pred CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecc-eEEEEEEEeeccCC---------cEEEEE
Confidence 48999998753 57999999999999999999999999999997654 23 3333332221 123456
Q ss_pred EEEEEecccccCCcccccceeEEeeHhHHhhh-hccccc
Q 031268 121 MFALEVTEELESWPEQANYKRIWVSNNHFLWR-KHSNLV 158 (162)
Q Consensus 121 ~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~-~~~~l~ 158 (162)
+|.+..... .....+..+++|++++++.++ +.+..+
T Consensus 111 ~~~~~~~~~--~~~~~e~~~~~W~~~~el~~~~~~~~~~ 147 (158)
T 3hhj_A 111 LYFCSHYKG--VAQGREGQNLKWIFINDLDKYPMPEADK 147 (158)
T ss_dssp EEEESCCBS--CCCCTTSCEEEEEEGGGGGGSCCCTTTH
T ss_pred EEEEEECCC--ccCCccccceEEEcHHHHhhCCCCcchH
Confidence 666654432 222334578999999999886 334333
No 33
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.84 E-value=1e-20 Score=134.35 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=78.0
Q ss_pred cCceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeee
Q 031268 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 98 (162)
Q Consensus 19 ~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~ 98 (162)
..++.++++|+++. ++|||++| .+.|.||||++++|||+++||+||++||||+.+... ..++.
T Consensus 16 ~~~~~~~~~ii~~~--------------~~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~ 78 (154)
T 2pqv_A 16 TVFGVRATALIVQN--------------HKLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAG-QLAFV 78 (154)
T ss_dssp EEEEEEEEECCEET--------------TEEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEE-EEEEE
T ss_pred ceEeEEEEEEEEEC--------------CEEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeec-eEEEE
Confidence 35577888888863 38999998 678999999999999999999999999999998765 45555
Q ss_pred EEeecccccccCCCCCCceEEEEEEEEecccccC--CcccccceeEEeeHhHHhhh
Q 031268 99 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELES--WPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~--~~~~~~~~~~W~~~~ea~~~ 152 (162)
+.+...... .......++|.+........ .++.+..+++|++++++.++
T Consensus 79 ~~~~~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 79 VENRFEVDG-----VSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp EEEEEEETT-----EEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGS
T ss_pred EeeeecCCC-----CcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhc
Confidence 443222111 01112345677765443221 12333578999999999986
No 34
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.2e-20 Score=131.39 Aligned_cols=108 Identities=18% Similarity=0.156 Sum_probs=73.5
Q ss_pred EEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeec
Q 031268 24 VAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRS 103 (162)
Q Consensus 24 ~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~ 103 (162)
++++++++.+ .++|||+++...+.|.||||++++|||+++||+||++||||+.+... ..+..+....
T Consensus 6 ~~~~~i~~~~------------~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~ 72 (146)
T 2jvb_A 6 VRGAAIFNEN------------LSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDY-IDDNQFIERN 72 (146)
T ss_dssp CEEEEEBCTT------------SSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSS-SCSSCEEEEE
T ss_pred EEEEEEEeCC------------CCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHh-cccccccccc
Confidence 4667777654 25899999887788999999999999999999999999999987644 2333332221
Q ss_pred ccccccCCCCCCceEEEEEEEEe-ccc--ccCCcccccceeEEeeHhHHhhhhc
Q 031268 104 KSRMNSCNSKEGGCRGYMFALEV-TEE--LESWPEQANYKRIWVSNNHFLWRKH 154 (162)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~f~~~~-~~~--~~~~~~~~~~~~~W~~~~ea~~~~~ 154 (162)
... ...++|.+.. ... ....++.+..+++|++++++.+++.
T Consensus 73 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 116 (146)
T 2jvb_A 73 IQG----------KNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMY 116 (146)
T ss_dssp ETT----------EEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGG
T ss_pred cCC----------ceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhc
Confidence 110 1233443332 111 1112244567899999999998754
No 35
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.83 E-value=7e-20 Score=129.23 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=70.3
Q ss_pred eEEEEEEeCCC----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEE
Q 031268 47 VLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMF 122 (162)
Q Consensus 47 ~~vLLv~r~~~----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f 122 (162)
++|||++|... +.|.||||++|+|||+.+||+||++||||+.+... ..++.+.+..... ....++|
T Consensus 33 ~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~~~~~~---------~~~~~~~ 102 (153)
T 3ees_A 33 GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVG-ELKLACTHSYGDV---------GILILFY 102 (153)
T ss_dssp TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECC-CEEEEEEEEETTE---------EEEEEEE
T ss_pred CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccC-ceEEEEEEecCCC---------eEEEEEE
Confidence 48999998764 67999999999999999999999999999998766 4666655444321 1245666
Q ss_pred EEEecccccCCcccccceeEEeeHhHHhhh
Q 031268 123 ALEVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
.+...... ....+..+++|++++++.++
T Consensus 103 ~~~~~~~~--~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 103 EILYWKGE--PRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp EECEEESC--CCCSSSSEEEEECGGGGGGS
T ss_pred EEEECCCC--cCCCccceEEEecHHHhhhC
Confidence 66544322 22334578999999999886
No 36
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.83 E-value=1.2e-20 Score=144.13 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=82.2
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCC--CCCHHHHHHHHHHHHhCcccccCCC
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWED--DETVSEAACREALEEAGVRGLLDEN 94 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~--gEt~~eaa~REl~EEtGl~~~~~~~ 94 (162)
.+.++|+||++..++ ++++|||++|.. .+.|.||||++++ |||+++||+||++||||+.+... .
T Consensus 20 ~p~v~v~~vi~~~~~----------~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~-~ 88 (240)
T 3gz5_A 20 AQLLTVDAVLFTYHD----------QQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYI-E 88 (240)
T ss_dssp -CEEEEEEEEEEEET----------TEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEE-E
T ss_pred CCccEEEEEEEEEeC----------CCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCce-e
Confidence 456899999997553 368999999875 4679999999999 99999999999999999998766 5
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhh
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLW 151 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~ 151 (162)
+++.+....... .......+|.+.+..........+..+++|++++++..
T Consensus 89 ~l~~~~~~~r~~-------~~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~ 138 (240)
T 3gz5_A 89 QLCTVGNNSRDA-------RGWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQ 138 (240)
T ss_dssp EEEEEEESSSST-------TSCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTT
T ss_pred eEEEeCCCccCC-------CceEEEEEEEEEecccccCCCCCcccceEEecHHHccc
Confidence 777776543321 12234455555554322221233457899999999964
No 37
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.83 E-value=1.3e-20 Score=137.51 Aligned_cols=112 Identities=16% Similarity=0.035 Sum_probs=76.7
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC----CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCC
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 95 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~----~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~ 95 (162)
..+.+|++++++.+ ++|||+++.+ .+.|.||||++|+|||+++||+||++||||+.+... ..
T Consensus 39 ~~~~~v~v~i~~~~-------------~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~ 104 (182)
T 2yvp_A 39 GPVAASFVLPVTER-------------GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETL-IP 104 (182)
T ss_dssp SSCEEEEEEEBCTT-------------SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCE-EE
T ss_pred ecCCEEEEEEEcCC-------------CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccE-EE
Confidence 33457777777644 4899998853 356999999999999999999999999999987654 34
Q ss_pred eeeEEeecccccccCCCCCCceEEEEEEEEecc--cccCCcccccceeEEeeHhHHhhhhc
Q 031268 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTE--ELESWPEQANYKRIWVSNNHFLWRKH 154 (162)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~~~~~~~W~~~~ea~~~~~ 154 (162)
++.+..... ......++|.+.... ......+.+..+++|++++++.+++.
T Consensus 105 l~~~~~~~~---------~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 156 (182)
T 2yvp_A 105 LPSFHPQPS---------FTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLA 156 (182)
T ss_dssp CCCBCSCTT---------TBCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHH
T ss_pred EEEEeCCCC---------ccccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 554322111 112355667665322 11122344567899999999998854
No 38
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.83 E-value=1.7e-20 Score=138.14 Aligned_cols=99 Identities=21% Similarity=0.193 Sum_probs=70.0
Q ss_pred EEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEEEEec
Q 031268 48 LVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVT 127 (162)
Q Consensus 48 ~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 127 (162)
+|||++++..+.|.||||++|+|||+++||+||++||||+.+... ..++.+.+........ ......++|.+...
T Consensus 16 ~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~f~a~~~ 90 (188)
T 3fk9_A 16 QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNP-ELKGIFSMVIFDEGKI----VSEWMLFTFKATEH 90 (188)
T ss_dssp EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSC-EEEEEEEEEEEETTEE----EEEEEEEEEEESCE
T ss_pred EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCc-eEEEEEEEEecCCCcc----eEEEEEEEEEEECC
Confidence 899999988889999999999999999999999999999998766 4677766544321100 00113455555432
Q ss_pred ccccCCcccccceeEEeeHhHHhhh
Q 031268 128 EELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 128 ~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
... ..+..+..+++|++++++.++
T Consensus 91 ~~~-~~~~~e~~~~~W~~~~el~~~ 114 (188)
T 3fk9_A 91 EGE-MLKQSPEGKLEWKKKDEVLEL 114 (188)
T ss_dssp ESC-CCSEETTEEEEEEEGGGGGGS
T ss_pred CCC-CcCCCCCEeEEEEEHHHhhhC
Confidence 221 122333468999999999875
No 39
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.83 E-value=1.7e-20 Score=140.07 Aligned_cols=119 Identities=12% Similarity=0.068 Sum_probs=83.1
Q ss_pred ceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEE
Q 031268 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE 100 (162)
Q Consensus 21 ~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~ 100 (162)
++..|++++++. ++|||+++. .+.|.||||++|+|||+.+||+||++||||+.+... ..++.+.
T Consensus 69 ~~~~v~~vv~~~--------------~~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~l~~~~ 132 (206)
T 3o8s_A 69 PKLDTRAAIFQE--------------DKILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQ-RVVAILD 132 (206)
T ss_dssp CEEEEEEEEEET--------------TEEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEE-EEEEEEE
T ss_pred CCccEEEEEEEC--------------CEEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceee-eEEEEEe
Confidence 457788888863 389999988 778999999999999999999999999999998766 4677665
Q ss_pred eecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh-ccccccc
Q 031268 101 FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK-HSNLVGM 160 (162)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~-~~~l~~~ 160 (162)
+....... .......++|.+....... .++.+..+++|++++++.++. .+.++++
T Consensus 133 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w~~~~el~~l~~~~~~~~~ 188 (206)
T 3o8s_A 133 KHKNNPAK----SAHRVTKVFILCRLLGGEF-QPNSETVASGFFSLDDLPPLYLGKNTAEQ 188 (206)
T ss_dssp HHHHCC---------CEEEEEEEEEEEEECC-CCCSSCSEEEEECTTSCCCBCTTTCCHHH
T ss_pred ccccCCCC----CCceEEEEEEEEEecCCee-cCCCCceEEEEEeHHHhhhccCCCchHHH
Confidence 33221110 1112345666666543322 233456789999999999873 4444443
No 40
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.83 E-value=2.5e-20 Score=132.92 Aligned_cols=56 Identities=27% Similarity=0.271 Sum_probs=50.0
Q ss_pred eEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccC
Q 031268 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 92 (162)
Q Consensus 23 ~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~ 92 (162)
.++++|+++ + ++|||++++..+.|.||||++|+|||+++||+||++||||+++...
T Consensus 2 ~~~~~vi~~-~-------------~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 57 (156)
T 1k2e_A 2 IVTSGVLVE-N-------------GKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPI 57 (156)
T ss_dssp EEEEEECEE-T-------------TEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEC
T ss_pred eEEEEEEEE-C-------------CEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceec
Confidence 567788887 3 3899999987788999999999999999999999999999998765
No 41
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.82 E-value=1.7e-19 Score=126.31 Aligned_cols=113 Identities=19% Similarity=0.064 Sum_probs=76.7
Q ss_pred eeEEEEEEEeccCCcccccccccCceEEEEEEeCCC----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCee
Q 031268 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (162)
Q Consensus 22 r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~ 97 (162)
+.++++++++.+ ++|||++|... +.|.||||++++|||+.+||+||++||||+.+... ....
T Consensus 8 ~~~~~~vi~~~~-------------~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~ 73 (144)
T 3r03_A 8 LLVTAAALIDPD-------------GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRAS-CLAP 73 (144)
T ss_dssp EEEEEEEEBCTT-------------SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGG-GCEE
T ss_pred eEEEEEEEEcCC-------------CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeecc-ceEE
Confidence 445556666543 47999998753 67999999999999999999999999999997654 2222
Q ss_pred --eEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh-hcccccc
Q 031268 98 --EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR-KHSNLVG 159 (162)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~-~~~~l~~ 159 (162)
.+.+.... .....++|.+...... ....+..+++|++++++.++ +.+..+.
T Consensus 74 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~ 127 (144)
T 3r03_A 74 LAFASHSYDT---------FHLLMPLYACRSWRGR--ATAREGQTLAWVRAERLREYPMPPADLP 127 (144)
T ss_dssp EEEEEEECSS---------SEEEEEEEEECCCBSC--CCCCSSCEEEEECGGGGGGSCCCTTTTT
T ss_pred EEeeeccCCC---------eEEEEEEEEEEecCCc--cCCCCcceEEEEeHHHhccCCCCcchHH
Confidence 23222211 1235566776554332 22334578999999999987 4444443
No 42
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.82 E-value=9.4e-20 Score=131.68 Aligned_cols=109 Identities=22% Similarity=0.195 Sum_probs=73.6
Q ss_pred eeEEEEEEEeccCCcccccccccCceEEEEEEeCC----CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCee
Q 031268 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (162)
Q Consensus 22 r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~----~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~ 97 (162)
+.+|++++++ + ++|||+++.+ .+.|.||||++|+|||+++||+||++||||+ +... ..++
T Consensus 34 ~~~v~vii~~-~-------------~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~-~~l~ 97 (170)
T 1v8y_A 34 KPAVAVIALR-E-------------GRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDL-TYLF 97 (170)
T ss_dssp CCEEEEEEEE-T-------------TEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEE-EEEE
T ss_pred CCeEEEEEEE-C-------------CEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCc-eeeE
Confidence 3578788887 4 3899998753 3569999999999999999999999999999 7655 4566
Q ss_pred eEEeecccccccCCCCCCceEEEEEEEEeccccc-CCcccccceeEEeeHhHHhhhhcc
Q 031268 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELE-SWPEQANYKRIWVSNNHFLWRKHS 155 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~~~~~~~W~~~~ea~~~~~~ 155 (162)
.+...... .....++|.+....... ...+.+..+++|++++++.+++..
T Consensus 98 ~~~~~~~~---------~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 147 (170)
T 1v8y_A 98 SYFVSPGF---------TDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQR 147 (170)
T ss_dssp EEESCTTT---------BCCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHT
T ss_pred EEecCCCc---------cccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHC
Confidence 55322111 12245666665433211 223344578999999999988543
No 43
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.82 E-value=2.2e-19 Score=130.55 Aligned_cols=109 Identities=20% Similarity=0.166 Sum_probs=76.5
Q ss_pred ceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-----CCCeee-CCCccCCCCCHHHHHHHHHHHHhCcccccCCC
Q 031268 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVF-PKGGWEDDETVSEAACREALEEAGVRGLLDEN 94 (162)
Q Consensus 21 ~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~l-PgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~ 94 (162)
.+.++++++++.+ ++|||++|.. .+.|.| |||++|+|||+.+||+||++||||+.+... .
T Consensus 36 ~~~~~~v~i~~~~-------------~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~-~ 101 (180)
T 2fkb_A 36 RHRATYIVVHDGM-------------GKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPF-A 101 (180)
T ss_dssp CEEEEEEEEECSS-------------SCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCC-E
T ss_pred eeeEEEEEEECCC-------------CEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccce-E
Confidence 3455656666543 4799988864 356999 999999999999999999999999987655 4
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
.++.+.+..... ....++|.+..... ......+..+++|++++++.+++
T Consensus 102 ~l~~~~~~~~~~---------~~~~~~f~~~~~~~-~~~~~~E~~~~~W~~~~el~~~~ 150 (180)
T 2fkb_A 102 EHGQFYFEDKNC---------RVWGALFSCVSHGP-FALQEDEVSEVCWLTPEEITARC 150 (180)
T ss_dssp EEEEEEEEETTE---------EEEEEEEEEECCCC-CCCCTTTEEEEEEECHHHHHTTG
T ss_pred EEEEEEecCCCc---------eEEEEEEEEecCCC-cCCChhHhheEEEecHHHHHHHH
Confidence 667665543211 22456676664332 12233445789999999999874
No 44
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.82 E-value=1e-19 Score=130.57 Aligned_cols=104 Identities=16% Similarity=0.099 Sum_probs=66.2
Q ss_pred eEEEEEEeCCC-----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeee--------EEeecccccccCCCC
Q 031268 47 VLVLMISTPNR-----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE--------WEFRSKSRMNSCNSK 113 (162)
Q Consensus 47 ~~vLLv~r~~~-----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~--------~~~~~~~~~~~~~~~ 113 (162)
++|||++|... +.|.||||++|+|||+++||+||++||||+.+... ..++. +.|......
T Consensus 39 ~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~~~~~~~~------ 111 (165)
T 3oga_A 39 GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILS-DITPWTFRDDIRIKTYADGRQE------ 111 (165)
T ss_dssp TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEE-EEEEEEEEEEEEEEEC--CCEE------
T ss_pred CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCcccc-ceeeeeeecceeeEecCCCCce------
Confidence 48999988743 67999999999999999999999999999997654 23321 111111000
Q ss_pred CCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh-hccccc
Q 031268 114 EGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR-KHSNLV 158 (162)
Q Consensus 114 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~-~~~~l~ 158 (162)
......++|.+........ +..+..+++|++++++.++ +.+..+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~ 156 (165)
T 3oga_A 112 EIYMIYLIFDCVSANRDIC-INDEFQDYAWVKPEELALYDLNVATR 156 (165)
T ss_dssp EEEEEEEEEEEEESCCCCC-CCTTEEEEEEECGGGGGGSCBCHHHH
T ss_pred eEEEEEEEEEeeccCCCcc-CCchheeeEEccHHHHhhCCCCHHHH
Confidence 0011234455544332222 2344578999999999986 444433
No 45
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.82 E-value=4.4e-20 Score=133.19 Aligned_cols=85 Identities=20% Similarity=0.061 Sum_probs=60.5
Q ss_pred EEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEEEEec
Q 031268 48 LVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVT 127 (162)
Q Consensus 48 ~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 127 (162)
+|||++++ .+.|.||||++|+|||+.+||+||++||||+.+... ..++.+.+.. ...++|.+...
T Consensus 28 ~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~l~~~~~~~-------------~~~~~f~~~~~ 92 (163)
T 3f13_A 28 GVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSM-LYLFDHITPF-------------NAHKVYLCIAQ 92 (163)
T ss_dssp EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEE-EEEEEEECSS-------------EEEEEEEEEC-
T ss_pred EEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCccccee-EEEEEEecCC-------------eEEEEEEEEEC
Confidence 79999886 578999999999999999999999999999998765 4565554322 24566776654
Q ss_pred ccccCCcccccceeEEeeHhHH
Q 031268 128 EELESWPEQANYKRIWVSNNHF 149 (162)
Q Consensus 128 ~~~~~~~~~~~~~~~W~~~~ea 149 (162)
+.. .+..+..+++||+.+.+
T Consensus 93 ~~~--~~~~E~~~~~W~~~~~~ 112 (163)
T 3f13_A 93 GQP--KPQNEIERIALVSSPDT 112 (163)
T ss_dssp CCC--CCCTTCCEEEEESSTTC
T ss_pred CcC--ccCCCceEEEEECcccc
Confidence 332 22335678999994443
No 46
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.82 E-value=4e-20 Score=148.73 Aligned_cols=130 Identities=22% Similarity=0.201 Sum_probs=82.4
Q ss_pred eEEEEEEEeccCC------ccccccc----ccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccC
Q 031268 23 LVAGCIPYKFEKN------DENKNCK----MEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 92 (162)
Q Consensus 23 ~~v~~i~~~~~~~------~~~~~~~----~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~ 92 (162)
.++|+|+|+.... +...... .+++.+|||++++..+.|.||||++|+|||+++||+||++||||+.+...
T Consensus 4 ~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~ 83 (364)
T 3fjy_A 4 EAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLG 83 (364)
T ss_dssp CEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEE
T ss_pred cccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeec
Confidence 4789999985421 0000000 03468999999988888999999999999999999999999999998766
Q ss_pred CCCeeeEEeeccccccc----CCCCCCceEEEEEEEEecccc----------c--CCcccccceeEEeeHhHHhhhh
Q 031268 93 ENPLGEWEFRSKSRMNS----CNSKEGGCRGYMFALEVTEEL----------E--SWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 93 ~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~f~~~~~~~~----------~--~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
..++.+.|........ .++......+++|.+...... . ...+++..+++|++++++.+++
T Consensus 84 -~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~ 159 (364)
T 3fjy_A 84 -PYLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKIL 159 (364)
T ss_dssp -EEEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHC
T ss_pred -cccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHh
Confidence 4666555443211000 000011235667777655431 0 1223456899999999999874
No 47
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.81 E-value=8.8e-20 Score=134.65 Aligned_cols=112 Identities=15% Similarity=0.017 Sum_probs=76.4
Q ss_pred eeEEEEEEEeccCCcccccccccCceEEEEEEeC----------CCCCeeeCCCccCCCCCHHHHHHHHHHHHhCccccc
Q 031268 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTP----------NRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLL 91 (162)
Q Consensus 22 r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~----------~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~ 91 (162)
..+|+++++..+ +++|||+++. ..+.|+||||++| |||+++||+||++||||+.+..
T Consensus 45 ~~av~v~~~~~~------------~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~ 111 (191)
T 3o6z_A 45 GNGATILLYNTK------------KKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGE 111 (191)
T ss_dssp CCEEEEEEEETT------------TTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSC
T ss_pred CCEEEEEEEECC------------CCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCc
Confidence 346777777754 2589999875 3455999999999 9999999999999999999765
Q ss_pred CCCCeeeEEeecccccccCCCCCCceEEEEEEEEeccccc----CCcccccceeEEeeHhHHhhhhccc
Q 031268 92 DENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELE----SWPEQANYKRIWVSNNHFLWRKHSN 156 (162)
Q Consensus 92 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~----~~~~~~~~~~~W~~~~ea~~~~~~~ 156 (162)
. ..++.+...... .....++|.+....... ...+.+..+++|++++++.+++.++
T Consensus 112 ~-~~l~~~~~~~~~---------~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 112 V-RKLFELYMSPGG---------VTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp E-EEEEEEESCTTT---------BCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHS
T ss_pred E-EEEEEEEeCCCc---------cCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 5 456654322211 12356777776543211 1114456799999999999986543
No 48
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.81 E-value=9.5e-20 Score=134.26 Aligned_cols=113 Identities=20% Similarity=0.139 Sum_probs=79.6
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-----CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCC
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN 94 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~ 94 (162)
+.+..+++|+++.++ +.+|||++|.. .+.|.||||++|+|||+++||+||++||||+.+... .
T Consensus 32 ~~~~~~~~v~i~~~~-----------~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~ 99 (194)
T 1nqz_A 32 HYRRAAVLVALTREA-----------DPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAV-T 99 (194)
T ss_dssp -CEEEEEEEEEESSS-----------SCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGC-E
T ss_pred CCceEEEEEEEecCC-----------CeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccce-E
Confidence 456777777774332 34899999864 467999999999999999999999999999998766 4
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEecccc--cCCcccccceeEEeeHhHH-hhhh
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--ESWPEQANYKRIWVSNNHF-LWRK 153 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~~~~~~W~~~~ea-~~~~ 153 (162)
.++.+.+..... ...+++|.+...... ....+.+..+++|++++++ .+..
T Consensus 100 ~l~~~~~~~~~~---------~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 100 LLGELDDVFTPV---------GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EEEECCCEEETT---------TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred EEEEccCccCCC---------CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCC
Confidence 666654333211 135667777665322 2233445578999999999 7653
No 49
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=136.97 Aligned_cols=115 Identities=15% Similarity=0.083 Sum_probs=78.1
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-----------------------------------CCCeeeCC
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----------------------------------RDDLVFPK 64 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----------------------------------~~~W~lPg 64 (162)
..+.+|++++++.+ .++|||+++.+ ...|+|||
T Consensus 34 ~~~~aV~vl~~~~~------------~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPg 101 (218)
T 3q91_A 34 KTHDSVTVLLFNSS------------RRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCA 101 (218)
T ss_dssp -CCCEEEEEEEEGG------------GTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEE
T ss_pred EcCCeEEEEEEECC------------CCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCc
Confidence 33568888888854 24899998742 34699999
Q ss_pred CccCC-CCCHHHHHHHHHHHHhCccc--ccCCCCeeeEEeecccccccCCCCCCceEEEEEEEEecccc------cCCcc
Q 031268 65 GGWED-DETVSEAACREALEEAGVRG--LLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL------ESWPE 135 (162)
Q Consensus 65 G~ve~-gEt~~eaa~REl~EEtGl~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~------~~~~~ 135 (162)
|++|+ |||+++||+||++||||+.+ ... ..++.+...... .....++|.+.+.... ....+
T Consensus 102 G~ve~~gEs~~eaA~REl~EEtGl~~~~~~l-~~l~~~~~~~g~---------~~~~~~~f~a~~~~~~~~~~~~~~~d~ 171 (218)
T 3q91_A 102 GLVDQPGLSLEEVACKEAWEECGYHLAPSDL-RRVATYWSGVGL---------TGSRQTMFYTEVTDAQRSGPGGGLVEE 171 (218)
T ss_dssp EECCSSSCCHHHHHHHHHHHHHCBCCCGGGC-EEEEEEEEC------------CCEEEEEEEEEECGGGBCC--------
T ss_pred ceeCCCCCCHHHHHHHHHHHHhCCccccCce-EEEEEEecCCCc---------cceEEEEEEEEECCcccccCCCCCCCC
Confidence 99999 99999999999999999997 444 355554322211 1235677777755321 12234
Q ss_pred cccceeEEeeHhHHhhhhccc
Q 031268 136 QANYKRIWVSNNHFLWRKHSN 156 (162)
Q Consensus 136 ~~~~~~~W~~~~ea~~~~~~~ 156 (162)
.+..++.|++++++.+++.++
T Consensus 172 ~E~~ev~wv~l~el~~~i~~g 192 (218)
T 3q91_A 172 GELIEVVHLPLEGAQAFADDP 192 (218)
T ss_dssp -CCEEEEEEEGGGHHHHHHCT
T ss_pred CcEEEEEEEEHHHHHHHHHcC
Confidence 456889999999999986544
No 50
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.81 E-value=1.5e-19 Score=134.26 Aligned_cols=99 Identities=18% Similarity=0.077 Sum_probs=70.1
Q ss_pred EEEEEEeCCC----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEE
Q 031268 48 LVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 123 (162)
Q Consensus 48 ~vLLv~r~~~----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~ 123 (162)
+|||+++.+. +.|+||||++|+|||+++||+||++||||+.+... ..++.+....... ....++|.
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~-~~l~~~~~~~~~~---------~~~~~~f~ 130 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDL-TFLKKLSMAPSYF---------SSKMNIVV 130 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEECCTTTC---------CCEEEEEE
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCce-EEEEEEeCCCCcc---------CcEEEEEE
Confidence 8999987532 35999999999999999999999999999998765 4666665322111 12456666
Q ss_pred EEeccccc-CCcccccceeEEeeHhHHhhhhccc
Q 031268 124 LEVTEELE-SWPEQANYKRIWVSNNHFLWRKHSN 156 (162)
Q Consensus 124 ~~~~~~~~-~~~~~~~~~~~W~~~~ea~~~~~~~ 156 (162)
+....... ...+.+..++.|++++++.+++..+
T Consensus 131 a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 164 (198)
T 1vhz_A 131 AQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDP 164 (198)
T ss_dssp EEEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCT
T ss_pred EEeCCcccCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 65432211 2223445788999999999986543
No 51
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.81 E-value=5.1e-20 Score=131.47 Aligned_cols=124 Identities=20% Similarity=0.218 Sum_probs=78.8
Q ss_pred ccCceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCC-
Q 031268 18 EDQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP- 95 (162)
Q Consensus 18 ~~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~- 95 (162)
.+.+|.+|++++++.+ ++|||++|.. .+.|.||||++|+|||+++||+||++||||+.+......
T Consensus 10 ~~~~~~~v~~~i~~~~-------------~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~ 76 (165)
T 1f3y_A 10 PEGYRRNVGICLMNND-------------KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEV 76 (165)
T ss_dssp CSSCCCEEEEEEECTT-------------SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEEC
T ss_pred ccceeeeEEEEEECCC-------------CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhccc
Confidence 3567889999888654 4899999875 367999999999999999999999999999986421000
Q ss_pred --eeeEEeecccc----cccCCCCCCceEEEEEEEEeccccc--CC-----cccccceeEEeeHhHHhhhhcc
Q 031268 96 --LGEWEFRSKSR----MNSCNSKEGGCRGYMFALEVTEELE--SW-----PEQANYKRIWVSNNHFLWRKHS 155 (162)
Q Consensus 96 --l~~~~~~~~~~----~~~~~~~~~~~~~~~f~~~~~~~~~--~~-----~~~~~~~~~W~~~~ea~~~~~~ 155 (162)
...+.+..... .... ........++|.+.+..... .. ++.+..+++|++++++.+++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 148 (165)
T 1f3y_A 77 PYWLTYDFPPKVREKLNIQWG-SDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVE 148 (165)
T ss_dssp SSCCBCCCCHHHHHHHGGGSC-SSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCG
T ss_pred ccceeeecCcccccccccccc-ccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhh
Confidence 01122211100 0000 00001134566666543211 11 2345679999999999997644
No 52
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.81 E-value=3.5e-19 Score=123.97 Aligned_cols=94 Identities=18% Similarity=0.182 Sum_probs=68.7
Q ss_pred eEEEEEEeCC----CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEE
Q 031268 47 VLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMF 122 (162)
Q Consensus 47 ~~vLLv~r~~----~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f 122 (162)
++|||++|.. .+.|.||||++++|||+++||+||++||||+.+... ..++.+.+..... ....++|
T Consensus 20 ~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~~~~~~---------~~~~~~~ 89 (140)
T 2rrk_A 20 GKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVG-EYVASHQREVSGR---------IIHLHAW 89 (140)
T ss_dssp TEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECC-EEEEEEEEEETTE---------EEEEEEE
T ss_pred CEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecc-cEEEEEEEecCCc---------EEEEEEE
Confidence 4899999864 367999999999999999999999999999998765 4667665443221 1245666
Q ss_pred EEEecccccCCcccccceeEEeeHhHHhhh
Q 031268 123 ALEVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
.+...... ....+..+++|++++++.++
T Consensus 90 ~~~~~~~~--~~~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 90 HVPDFHGT--LQAHEHQALVWCSPEEALQY 117 (140)
T ss_dssp EESEEEEC--CCCSSCSCEEEECHHHHTTS
T ss_pred EEEeeCCC--cCCCccceeEEeCHHHHhhC
Confidence 66443321 12233468899999999886
No 53
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.81 E-value=2.8e-19 Score=138.86 Aligned_cols=119 Identities=17% Similarity=0.216 Sum_probs=81.5
Q ss_pred cCceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCC-C
Q 031268 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE-N 94 (162)
Q Consensus 19 ~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~-~ 94 (162)
..+.++|++|+++.+++ .+.++|||++|.. .+.|.||||++|+|||+++||+||++||||+.+.... .
T Consensus 36 ~~p~v~v~~vv~~~~~~--------~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~ 107 (273)
T 2fml_A 36 EKPSLTVDMVLLCYNKE--------ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIE 107 (273)
T ss_dssp CCCEEEEEEEEEEEETT--------TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred CCCceEEEEEEEEEcCC--------CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEE
Confidence 34578999999986531 0157999999875 3679999999999999999999999999998754320 2
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
.++.|...... .......++|.+.+.... ..+..+..+++|++++++.+.+
T Consensus 108 ~l~~~~~~~r~-------~~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~~~~e~~~~~ 158 (273)
T 2fml_A 108 QLHSFSRPDRD-------PRGWVVTVSYLAFIGEEP-LIAGDDAKEVHWFNLERHGQHI 158 (273)
T ss_dssp EEEEECCTTSS-------TTSSEEEEEEEEECCCCC-CCCCTTEEEEEEEEEEEETTEE
T ss_pred EEEEEcCCCCC-------CCceEEEEEEEEEeCCCC-CCCCcceeeEEEEEhhHhhhhh
Confidence 34444322211 112335566766655432 2344455789999999876653
No 54
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.80 E-value=7.3e-19 Score=124.70 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=77.8
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCC--CeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCee
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRD--DLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~--~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~ 97 (162)
..+.++++|+++.+. ++..|||++|...+ .|.||||++++|||+.+||+||++||||+.+... ..++
T Consensus 6 ~~~~~~~~ii~~~~~----------~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~ 74 (155)
T 2b06_A 6 LTILTNICLIEDLET----------QRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNP-QLVG 74 (155)
T ss_dssp CEEEEEEEEEEETTT----------TEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESC-EEEE
T ss_pred CcEEEEEEEEEECCC----------CeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCC-cEEE
Confidence 346778888877432 23448887775432 2799999999999999999999999999998766 4666
Q ss_pred eEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh-hcccccc
Q 031268 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR-KHSNLVG 159 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~-~~~~l~~ 159 (162)
.+.+.... ......++|.+...... ....+..+++|++++++.++ +.+.++.
T Consensus 75 ~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~ 127 (155)
T 2b06_A 75 IKNWPLDT--------GGRYIVICYKATEFSGT--LQSSEEGEVSWVQKDQIPNLNLAYDMLP 127 (155)
T ss_dssp EEEEECTT--------SCEEEEEEEEECEEEEC--CCCBTTBEEEEEEGGGGGGSCBCTTHHH
T ss_pred EEeeccCC--------CceEEEEEEEEEecCCC--CCCCcceeeEEeeHHHhhhCCCChhHHH
Confidence 66554321 11234566666443221 11234578999999999986 3344443
No 55
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.80 E-value=1.1e-19 Score=133.63 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=77.4
Q ss_pred ceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-----CCCeee-CCCccCCCCCHHHHHHHHHHHHhCcccccCCC
Q 031268 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVF-PKGGWEDDETVSEAACREALEEAGVRGLLDEN 94 (162)
Q Consensus 21 ~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~l-PgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~ 94 (162)
.+.+|++++++.+ ++|||++|.. .+.|.| |||++|+|||+++||+||++||||+.+.....
T Consensus 31 ~~~~v~~~i~~~~-------------g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~ 97 (190)
T 1hzt_A 31 LHLAFSSWLFNAK-------------GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPES 97 (190)
T ss_dssp CEECEEEEEECTT-------------CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEE
T ss_pred eEEEEEEEEEcCC-------------CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhhe
Confidence 3456777777643 4899999854 367999 99999999999999999999999998764312
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhhc
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRKH 154 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~~ 154 (162)
.++.+.+....... .......++|.+...+.. ...+.+..+++|++++++.+++.
T Consensus 98 ~~~~~~~~~~~~~~----~~~~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~~ 152 (190)
T 1hzt_A 98 IYPDFRYRATDPSG----IVENEVCPVFAARTTSAL-QINDDEVMDYQWCDLADVLHGID 152 (190)
T ss_dssp EETTCEEEEECTTS----CEEEEECCEEEEEBCSCC-CCCTTTEEEEEEECHHHHHHHHH
T ss_pred eeeeEEEEeeCCCC----CcceEEEEEEEEecCCCC-cCCccceeeEEEecHHHHHHHHH
Confidence 34444433211100 001223466777655422 22334557899999999998754
No 56
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.80 E-value=2.3e-19 Score=129.44 Aligned_cols=108 Identities=19% Similarity=0.169 Sum_probs=75.0
Q ss_pred eeEEEEEEEeccCCcccccccccCceEEEEEEeCC-----CCCee-eCCCccCCCCCHHHHHHHHHHHHhCcccccCC-C
Q 031268 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLV-FPKGGWEDDETVSEAACREALEEAGVRGLLDE-N 94 (162)
Q Consensus 22 r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~-lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~-~ 94 (162)
+.++++++++.+ ++|||++|.. .+.|. ||||++++|||+.+||+||++||||+.+.... .
T Consensus 34 ~~~v~v~i~~~~-------------~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~ 100 (171)
T 1q27_A 34 VRVVNAFLRNSQ-------------GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWR 100 (171)
T ss_dssp CEEEEEEEEETT-------------TEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEE
T ss_pred ceEEEEEEECCC-------------CeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceE
Confidence 667777777654 3899998753 36698 99999999999999999999999999976541 2
Q ss_pred CeeeEE-eecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhh
Q 031268 95 PLGEWE-FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRK 153 (162)
Q Consensus 95 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~ 153 (162)
.++.+. +.... ....++|.+..... ......+..+++|++++++.++.
T Consensus 101 ~~~~~~~~~~~~----------~~~~~~f~~~~~~~-~~~~~~E~~~~~W~~~~el~~~~ 149 (171)
T 1q27_A 101 PLASFSPFQTTL----------SSFMCVYELRSDAT-PIFNPNDISGGEWLTPEHLLARI 149 (171)
T ss_dssp EEEEECSSSSCC----------SSEEEEEEEECCCC-CCSCTTTCSCCEEECHHHHHHHH
T ss_pred EEEEEeccCCCC----------ccEEEEEEEEECCc-cccCchhhheEEEecHHHHHHHH
Confidence 333332 22211 11567777766322 22223445789999999999763
No 57
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.80 E-value=2.5e-19 Score=134.06 Aligned_cols=111 Identities=23% Similarity=0.159 Sum_probs=75.3
Q ss_pred eEEEEEEEeccCCcccccccccCceEEEEEEeCC---------CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCC
Q 031268 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---------RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE 93 (162)
Q Consensus 23 ~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---------~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~ 93 (162)
.+|++++++.+ +++|||+++.+ .+.|+||||++|+|||+++||+||++||||+.+...
T Consensus 58 ~av~vl~~~~~------------~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~- 124 (209)
T 1g0s_A 58 HAAVLLPFDPV------------RDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRT- 124 (209)
T ss_dssp CEEEEEEEETT------------TTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCE-
T ss_pred CEEEEEEEECC------------CCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcE-
Confidence 47777777743 24899998643 234999999999999999999999999999998655
Q ss_pred CCeeeEEeecccccccCCCCCCceEEEEEEEEecccc--c---CCcccccceeEEeeHhHHhhhhcc
Q 031268 94 NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--E---SWPEQANYKRIWVSNNHFLWRKHS 155 (162)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~---~~~~~~~~~~~W~~~~ea~~~~~~ 155 (162)
..++.+. ..... .....++|.+...... . ...+.+..++.|++++++.+++.+
T Consensus 125 ~~l~~~~-~~~g~--------~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~ 182 (209)
T 1g0s_A 125 KPVLSFL-ASPGG--------TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEE 182 (209)
T ss_dssp EEEEEEE-SCTTT--------BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHT
T ss_pred EEeEEEe-cCCCc--------cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 4566552 22111 1125677777653211 1 123334568999999999998654
No 58
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.80 E-value=3.5e-20 Score=127.31 Aligned_cols=94 Identities=19% Similarity=0.172 Sum_probs=67.6
Q ss_pred eEEEEEEeCCC----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEE
Q 031268 47 VLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMF 122 (162)
Q Consensus 47 ~~vLLv~r~~~----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f 122 (162)
++|||++|... +.|.||||++++|||+.+||+||++||||+.+... ..++.+.+.... .....++|
T Consensus 16 ~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~-~~~~~~~~~~~~---------~~~~~~~~ 85 (129)
T 1mut_A 16 NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHF-SLFEKLEYEFPD---------RHITLWFW 85 (129)
T ss_dssp TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE-CCCCCCBCCCSS---------CEEECCCE
T ss_pred CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccc-eEEEEEEEecCC---------ceEEEEEE
Confidence 48999998754 67999999999999999999999999999997655 355554432221 11234566
Q ss_pred EEEecccccCCcccccceeEEeeHhHHhhh
Q 031268 123 ALEVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
.+....... ...+..+++|++++++.++
T Consensus 86 ~~~~~~~~~--~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 86 LVERWEGEP--WGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp EEEECSSCC--CCCSSCCCEEEESSSCCTT
T ss_pred EEEccCCcc--CCcccceeEEeCHHHcccc
Confidence 666543221 2233467899999999886
No 59
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.79 E-value=1.6e-19 Score=134.81 Aligned_cols=110 Identities=15% Similarity=0.061 Sum_probs=72.3
Q ss_pred eEEEEEEEeccCCcccccccccCceEEEEEEeCC----CCCeeeCCCccC-CCCCHHHHHHHHHHHHhCcccccCCCCee
Q 031268 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWE-DDETVSEAACREALEEAGVRGLLDENPLG 97 (162)
Q Consensus 23 ~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~----~~~W~lPgG~ve-~gEt~~eaa~REl~EEtGl~~~~~~~~l~ 97 (162)
.+|++++++.+ ++|||+++.+ .+.|+||||++| +|||+++||+||++||||+.+... ..++
T Consensus 44 ~av~v~i~~~~-------------~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~-~~l~ 109 (207)
T 1mk1_A 44 GAVAIVAMDDN-------------GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTW-QVLV 109 (207)
T ss_dssp CEEEEEECCTT-------------SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEE-EEEE
T ss_pred CEEEEEEEcCC-------------CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCccccc-EEEE
Confidence 46666667543 4899998753 246999999999 999999999999999999998765 4555
Q ss_pred eEEeecccccccCCCCCCceEEEEEEEEecccccC---CcccccceeEEeeHhHHhhhhcc
Q 031268 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELES---WPEQANYKRIWVSNNHFLWRKHS 155 (162)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~~~~~~~W~~~~ea~~~~~~ 155 (162)
.+ +..... .....++|.+........ ..+.+..+++|++++++.+++..
T Consensus 110 ~~-~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 161 (207)
T 1mk1_A 110 DL-DTAPGF--------SDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLR 161 (207)
T ss_dssp EE-CSCTTT--------BCCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHT
T ss_pred EE-EcCCCc--------cccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 54 222111 111355666654332211 22344578999999999998543
No 60
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.78 E-value=5.9e-19 Score=132.12 Aligned_cols=113 Identities=19% Similarity=0.150 Sum_probs=74.1
Q ss_pred eEEEEEEEeccCCcccccccccCceEEEEEEeCC----CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeee
Q 031268 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 98 (162)
Q Consensus 23 ~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~----~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~ 98 (162)
.+|+++++..+++ ++++|||+++.+ .+.|+||||++|+|||+++||+||++||||+.+... ..++.
T Consensus 62 ~av~v~~v~~~~~---------~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~-~~l~~ 131 (212)
T 2dsc_A 62 DGVAVIPVLQRTL---------HYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIA-ECSPA 131 (212)
T ss_dssp SEEEEEEEEECTT---------SCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE-EECCC
T ss_pred CEEEEEEEEeCCC---------CCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccce-EEecc
Confidence 3666666654421 246899998643 235999999999999999999999999999987654 34444
Q ss_pred EEeecccccccCCCCCCceEEEEEEEEecc--c-----ccCCcccccceeEEeeHhHHhhhhc
Q 031268 99 WEFRSKSRMNSCNSKEGGCRGYMFALEVTE--E-----LESWPEQANYKRIWVSNNHFLWRKH 154 (162)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~-----~~~~~~~~~~~~~W~~~~ea~~~~~ 154 (162)
+...... .....++|.+.+.. . .....+.+..++.|++++++.+++.
T Consensus 132 ~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 132 VCMDPGL---------SNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp EESCTTT---------BCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred EEcCCCc---------cCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 3211111 01234555554322 1 1122244567899999999999865
No 61
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.78 E-value=7.1e-19 Score=136.54 Aligned_cols=109 Identities=20% Similarity=0.161 Sum_probs=72.1
Q ss_pred eEEEEEEEeccCCcccccccccCceEEEEEEeCC-CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEe
Q 031268 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (162)
Q Consensus 23 ~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~ 101 (162)
.++++|+++.+ .++|||+++.. .+.|.||||++|+|||+++||+||++||||+.+... ..+..|..
T Consensus 102 ~~v~avv~~~~------------~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l-~~~~~~~~ 168 (271)
T 2a6t_A 102 PVRGAIMLDMS------------MQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSR-INPNEFID 168 (271)
T ss_dssp CEEEEEEBCSS------------SSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTT-CCTTCEEE
T ss_pred CeEEEEEEECC------------CCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceee-eeeeeecc
Confidence 46778888753 25999999865 567999999999999999999999999999997654 23333321
Q ss_pred ecccccccCCCCCCceEEEEEEEEecccc---cCCcccccceeEEeeHhHHhhhhc
Q 031268 102 RSKSRMNSCNSKEGGCRGYMFALEVTEEL---ESWPEQANYKRIWVSNNHFLWRKH 154 (162)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~~~~~~~~~W~~~~ea~~~~~ 154 (162)
.... ....++|.+...... ....+.+..+++|++++++.++..
T Consensus 169 ~~~~----------~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 214 (271)
T 2a6t_A 169 MTIR----------GQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKK 214 (271)
T ss_dssp EEET----------TEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC-
T ss_pred CCcC----------CceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHh
Confidence 1110 113455655433211 111334557899999999988643
No 62
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.78 E-value=7.1e-19 Score=136.37 Aligned_cols=94 Identities=15% Similarity=0.070 Sum_probs=70.3
Q ss_pred eEEEEEEeCC--CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEEE
Q 031268 47 VLVLMISTPN--RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFAL 124 (162)
Q Consensus 47 ~~vLLv~r~~--~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 124 (162)
++|||+++.. .+.|.||||++|+|||+++||+||++||||+++... ..++.+.+.... ....+|.+
T Consensus 151 ~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~-~~~~~~~~~~~~-----------~~~~~f~a 218 (269)
T 1vk6_A 151 DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNL-RYVTSQPWPFPQ-----------SLMTAFMA 218 (269)
T ss_dssp TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEE-EEEEEEEEETTE-----------EEEEEEEE
T ss_pred CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeE-EEEEEEecCCCC-----------EEEEEEEE
Confidence 4899999875 467999999999999999999999999999998766 466666543321 14556666
Q ss_pred EecccccCCcccccceeEEeeHhHHhhh
Q 031268 125 EVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
..........+.+..+++||+++|+..+
T Consensus 219 ~~~~~~~~~~~~E~~~~~W~~~~el~~l 246 (269)
T 1vk6_A 219 EYDSGDIVIDPKELLEANWYRYDDLPLL 246 (269)
T ss_dssp EEEECCCCCCTTTEEEEEEEETTSCCSC
T ss_pred EECCCCcCCCCcceEEEEEEEHHHhhhc
Confidence 6543222222345578999999999876
No 63
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.77 E-value=1.7e-18 Score=137.39 Aligned_cols=121 Identities=17% Similarity=0.157 Sum_probs=76.4
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCe
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 96 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l 96 (162)
..+.+|++|+++. ++|||+++.. .+.|.||||++|+|||+++||+||++||||+.+... ..+
T Consensus 201 ~~~~~v~~vi~~~--------------~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~ 265 (341)
T 2qjo_A 201 PTFITTDAVVVQA--------------GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLP-VLR 265 (341)
T ss_dssp CCEEEEEEEEEET--------------TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHH-HHH
T ss_pred CCceEEEEEEEeC--------------CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccc-ccc
Confidence 3467888888852 3899999875 467999999999999999999999999999997644 233
Q ss_pred e----eEEeecccccccCCCCCCceEEEEEEEEecccc-cC-CcccccceeEEeeHhHHhhh---hccccccc
Q 031268 97 G----EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL-ES-WPEQANYKRIWVSNNHFLWR---KHSNLVGM 160 (162)
Q Consensus 97 ~----~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~-~~~~~~~~~~W~~~~ea~~~---~~~~l~~~ 160 (162)
+ ...|...... .......++|.+...... .. .++.+..+++|++++++.++ +.+..+.+
T Consensus 266 ~~~~~~~~~~~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~i 333 (341)
T 2qjo_A 266 GSIVDSHVFDAPGRS-----LRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQI 333 (341)
T ss_dssp HTEEEEEEECCTTSC-----TTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHH
T ss_pred ccccceEEEeCCCCC-----CCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHH
Confidence 3 1222221110 111233456666554322 11 23345578999999999985 44444433
No 64
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.76 E-value=1.2e-18 Score=130.42 Aligned_cols=111 Identities=13% Similarity=-0.043 Sum_probs=74.8
Q ss_pred cCceeEEEEEEEeccCCcccccccccCceEEEEEEeCCC-------CCeee-CCCccCCCCC--H----HHHHHHHHHHH
Q 031268 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-------DDLVF-PKGGWEDDET--V----SEAACREALEE 84 (162)
Q Consensus 19 ~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~-------~~W~l-PgG~ve~gEt--~----~eaa~REl~EE 84 (162)
..++..+..+++..+ ++|||++|... +.|.+ |||+||+||| + ++||+||++||
T Consensus 64 ~~~~q~i~~~II~~~-------------grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EE 130 (211)
T 3e57_A 64 ETTKQVIPYVVIMDG-------------DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEE 130 (211)
T ss_dssp TTEEEEEEEEEEEET-------------TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHH
T ss_pred CcccceEEEEEEEEC-------------CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHH
Confidence 355666666666544 48999998643 46888 9999999999 5 99999999999
Q ss_pred hCcccccCCCCeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh
Q 031268 85 AGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 85 tGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
||+++... ..++.+.+...... ..+..++|.+...... ..+.+..+++|++++++.++
T Consensus 131 tGl~v~~~-~~ig~~~~~~~~~~-------~~~l~~~f~~~~~~g~--~~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 131 VDVSLREL-EFLGLINSSTTEVS-------RVHLGALFLGRGKFFS--VKEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp EEEEEEEE-EEEEEEECCSSHHH-------HTEEEEEEEEEEEEEE--ESCTTTCEEEEEEHHHHHHH
T ss_pred hCCeeecc-EEEEEEeccCCCCC-------eEEEEEEEEEEeCCce--eCCCCeEEEEEEEHHHHHHh
Confidence 99988766 57777765332111 0122346777654322 22334578999999999886
No 65
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.76 E-value=3.9e-18 Score=121.19 Aligned_cols=111 Identities=18% Similarity=0.205 Sum_probs=73.9
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCCC----CCeeeCCCccCCCCCHH-HHHHHHHHHHhC-cccccCC
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVS-EAACREALEEAG-VRGLLDE 93 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~----~~W~lPgG~ve~gEt~~-eaa~REl~EEtG-l~~~~~~ 93 (162)
..+..+.+|+++.++ .+++|||++|... +.|+||||++++|||++ +||+||++|||| +.+...
T Consensus 17 ~~~~~~~~vi~~~~~----------~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~- 85 (155)
T 1x51_A 17 REESSATCVLEQPGA----------LGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHL- 85 (155)
T ss_dssp TEEEEEEEEEEEECS----------SSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTC-
T ss_pred CeEEEEEEEEEecCC----------CCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeee-
Confidence 345556666666421 1368999998653 57999999999999996 999999999999 776544
Q ss_pred CCeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh
Q 031268 94 NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
..++.+.+.... ....+++|.+....... ...+..+++|++++++.++
T Consensus 86 ~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 86 RHLGEVVHTFSH---------IKLTYQVYGLALEGQTP--VTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp EECCCBCCBCSS---------CEEEEEEEEEECSSCCC--CCCCCTTEEEEEHHHHHHS
T ss_pred eecceEEEecCC---------ccEEEEEEEEEEcCCCC--CCCCCCccEEccHHHhhhc
Confidence 234443322211 12245677776543211 1123467899999999876
No 66
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.72 E-value=2.1e-17 Score=131.81 Aligned_cols=112 Identities=18% Similarity=0.126 Sum_probs=73.4
Q ss_pred ceeEEEEEEEeccCCcccccccccCceEEEEEEeCC---CCCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCee
Q 031268 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (162)
Q Consensus 21 ~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~ 97 (162)
.+.+|++|+++ + ++|||+++.. .+.|.||||++|+|||+++||+||++||||+++... ..++
T Consensus 207 ~~~~v~~vv~~-~-------------~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~-~~~~ 271 (352)
T 2qjt_B 207 NFVTVDALVIV-N-------------DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHE-QLAI 271 (352)
T ss_dssp EEEEEEEEEEE-T-------------TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHH-HHHH
T ss_pred CceEEEEEEEE-C-------------CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccc-hhcc
Confidence 35677777774 2 3899999875 367999999999999999999999999999987643 1222
Q ss_pred ----eEEeecccccccCCCCCCceEEEEEEEEecccc--cC-CcccccceeEEeeH-hHHhhh
Q 031268 98 ----EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--ES-WPEQANYKRIWVSN-NHFLWR 152 (162)
Q Consensus 98 ----~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~-~~~~~~~~~~W~~~-~ea~~~ 152 (162)
...|...... .......++|.+.+.... .. .++.+..+++|+++ +++.++
T Consensus 272 ~~~~~~~~~~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 272 AKRCEKVFDYPDRS-----VRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp HEEEEEEECCTTSC-----TTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred eeeeeEEecCCCCC-----CCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh
Confidence 2222221110 011223445555543322 11 22445678999999 999984
No 67
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.70 E-value=9e-17 Score=125.89 Aligned_cols=70 Identities=17% Similarity=0.134 Sum_probs=53.1
Q ss_pred CceeEEEEEEEeccCCcccccccc----cCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCccc
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKM----EKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRG 89 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~----~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~ 89 (162)
++..++.+|+.+.+.+.+..++.. .+..+|||++|...+.|.||||+||+|||+.+||+||++||||+.+
T Consensus 108 gp~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 108 GPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGG
T ss_pred CccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCcc
Confidence 345688888877531111111111 1357999999988889999999999999999999999999999983
No 68
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.68 E-value=1.7e-16 Score=118.89 Aligned_cols=120 Identities=16% Similarity=0.029 Sum_probs=76.5
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCC-CHHHHHHHHHHHHhCcccccCCC----
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGVRGLLDEN---- 94 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gE-t~~eaa~REl~EEtGl~~~~~~~---- 94 (162)
+.+.++.++++..+. +....-.+++++|||++| ..+.|.||||++|+|| |+++||+||++||||+.+.....
T Consensus 31 ~~~~~~~~~l~~~~~--~vv~~i~~~~~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~ 107 (212)
T 1u20_A 31 GYKHACHALLHAPSQ--AKLFDRVPIRRVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDD 107 (212)
T ss_dssp SCEEEEEEEEEEECC--CEETTTEECCEEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGG
T ss_pred CCcccceEEEeCCCc--eEEEEEEecCCEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeee
Confidence 335566666665432 111111223568988887 4678999999999999 99999999999999999765421
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEeccccc----------CCcccccceeEEeeHhHHhhh
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELE----------SWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~----------~~~~~~~~~~~W~~~~ea~~~ 152 (162)
.++.+.+... .....++|.+....... ...+.+..++.|++++++.+.
T Consensus 108 ~~~~~~~~~~----------~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 108 YRSSQVREHP----------QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp EEEEEEECTT----------SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred EEEeccccCC----------CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 2344333221 12356777776543211 012233467999999998653
No 69
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=1e-15 Score=116.15 Aligned_cols=123 Identities=17% Similarity=0.140 Sum_probs=81.9
Q ss_pred CceeEEEEEEEeccCCcccccccccCc-eEEEEEEeCCC-----CCeeeCCCccCCCCC--------------------H
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKK-VLVLMISTPNR-----DDLVFPKGGWEDDET--------------------V 73 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~-~~vLLv~r~~~-----~~W~lPgG~ve~gEt--------------------~ 73 (162)
.+|.++.+|++++.. ++ .+|||++|... +.|.||||+||++|+ +
T Consensus 6 ~~r~aA~lill~~~~----------~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~ 75 (232)
T 3qsj_A 6 DIRKAATLVVIRDGA----------NKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPAL 75 (232)
T ss_dssp CEEEEEEEEEEEECG----------GGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHH
T ss_pred CCcceEEEEEEEcCC----------CCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHH
Confidence 467888899988653 23 69999999653 679999999999997 5
Q ss_pred HHHHHHHHHHHhCcccccCCC--------------------------------------CeeeEEeecccccccCCCCCC
Q 031268 74 SEAACREALEEAGVRGLLDEN--------------------------------------PLGEWEFRSKSRMNSCNSKEG 115 (162)
Q Consensus 74 ~eaa~REl~EEtGl~~~~~~~--------------------------------------~l~~~~~~~~~~~~~~~~~~~ 115 (162)
..||+||++||||+....... .+..+....+ ..+...
T Consensus 76 ~~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiT-----P~~~~r 150 (232)
T 3qsj_A 76 AVTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVT-----PPTQPV 150 (232)
T ss_dssp HHHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEEC-----CTTSSS
T ss_pred HHHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcC-----CcCCce
Confidence 899999999999997432100 0000100000 011234
Q ss_pred ceEEEEEEEEeccccc-CCcccccceeEEeeHhHHhhhhcccc
Q 031268 116 GCRGYMFALEVTEELE-SWPEQANYKRIWVSNNHFLWRKHSNL 157 (162)
Q Consensus 116 ~~~~~~f~~~~~~~~~-~~~~~~~~~~~W~~~~ea~~~~~~~l 157 (162)
++..++|.+....... .....|..++.|++++|+++....+-
T Consensus 151 RfdT~FFla~lpq~~~v~~d~~E~~~~~W~~p~eal~~~~~G~ 193 (232)
T 3qsj_A 151 RFDTRFFLCVGQHLGEPRLHGAELDAALWTPARDMLTRIQSGE 193 (232)
T ss_dssp EEEEEEEEEECSSCCCCCCCSSSEEEEEEEEHHHHHHHHHTTS
T ss_pred eEEEEEEEEECCCCCCCCCCCCceEEEEEEcHHHHHHHHHcCC
Confidence 4677888877763321 23445568999999999987655443
No 70
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.64 E-value=6.2e-16 Score=124.70 Aligned_cols=90 Identities=12% Similarity=0.030 Sum_probs=68.8
Q ss_pred eEEEEEEeCCC----CCeeeCCCccCCCCCHHHHHHHHHHHHhCcccccCCCCeeeEEeecccccccCCCCCCceEEEEE
Q 031268 47 VLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMF 122 (162)
Q Consensus 47 ~~vLLv~r~~~----~~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f 122 (162)
++|||++|... |.|+||||++|+| |+++|+.||+.||||+.+... ..++.+.+..... ....++|
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~-~~l~~~~h~~~h~---------~~~~~~~ 320 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELT-EPIVSFEHAFSHL---------VWQLTVF 320 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEEC-CCCCEEEEECSSE---------EEEEEEE
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeee-cccccEEEEcceE---------EEEEEEE
Confidence 58999999754 6799999999999 999999999999999998776 4677665544321 2245677
Q ss_pred EEEecccccCCcccccceeEEeeHhHHhhh
Q 031268 123 ALEVTEELESWPEQANYKRIWVSNNHFLWR 152 (162)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~ 152 (162)
.+..... ..+..+++|++++++.++
T Consensus 321 ~~~~~~~-----~~e~~~~~Wv~~~el~~~ 345 (369)
T 3fsp_A 321 PGRLVHG-----GPVEEPYRLAPEDELKAY 345 (369)
T ss_dssp EEEECCS-----SCCCTTEEEEEGGGGGGS
T ss_pred EEEEcCC-----CCCccccEEeeHHHhhhC
Confidence 7665442 123467899999999875
No 71
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.62 E-value=3.1e-15 Score=113.77 Aligned_cols=118 Identities=14% Similarity=0.018 Sum_probs=77.1
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-----CCCeeeC-CCccCCC------CC---HHHHHHHHHHHH
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVFP-KGGWEDD------ET---VSEAACREALEE 84 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~lP-gG~ve~g------Et---~~eaa~REl~EE 84 (162)
.++.++++++++.+ ++|||.+|.. .+.|.+| ||++++| || +.+||+||++||
T Consensus 57 ~~h~av~v~v~~~~-------------g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EE 123 (235)
T 2dho_A 57 LLHRAFSVFLFNTE-------------NKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAE 123 (235)
T ss_dssp CCEEEEEEEEECTT-------------CCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEEEcCC-------------CEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHH
Confidence 35667777777543 4899988853 2579999 5999999 88 499999999999
Q ss_pred hCcccccC----CCCeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhhcc
Q 031268 85 AGVRGLLD----ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRKHS 155 (162)
Q Consensus 85 tGl~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~~~ 155 (162)
||+.+... ...++.+.|........ ......++|.+...... .....+..+++|++++++.+++..
T Consensus 124 lGi~~~~v~~~~l~~l~~~~y~~~~~~~~----~~~e~~~vf~~~~~~~~-~~~~~Ev~~~~wv~~~el~~~l~~ 193 (235)
T 2dho_A 124 LGIPLEEVPPEEINYLTRIHYKAQSDGIW----GEHEIDYILLVRMNVTL-NPDPNEIKSYCYVSKEELKELLKK 193 (235)
T ss_dssp HCCCGGGSCGGGSEEEEEEEEEEECSSSB----EEEEEEEEEEEECCCCC-CCCTTTEEEEEEECHHHHHHHHHH
T ss_pred HCCCccccChhhcEEEEEEEEeccCCCcc----ceeEEEEEEEEEECCCC-cCChHHEEEEEEEcHHHHHHHHhh
Confidence 99986521 13566665544321110 00113466766654322 222344578999999999987543
No 72
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.60 E-value=5.2e-15 Score=113.25 Aligned_cols=118 Identities=11% Similarity=0.017 Sum_probs=76.9
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-----CCCeeeCC-CccCCC------CCH---HHHHHHHHHHH
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVFPK-GGWEDD------ETV---SEAACREALEE 84 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~lPg-G~ve~g------Et~---~eaa~REl~EE 84 (162)
.++.++.+++++.+ ++|||.+|.. .+.|.+|+ |++++| ||+ .+||+||++||
T Consensus 68 ~~h~av~v~v~~~~-------------g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EE 134 (246)
T 2pny_A 68 LLHRAFSVVLFNTK-------------NRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAE 134 (246)
T ss_dssp CCEEEEEEEEECTT-------------CCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHH
T ss_pred cEEEEEEEEEEeCC-------------CEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHH
Confidence 35667777777543 4899988853 25799995 999999 997 99999999999
Q ss_pred hCcccccC----CCCeeeEEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhhhcc
Q 031268 85 AGVRGLLD----ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWRKHS 155 (162)
Q Consensus 85 tGl~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~~~~ 155 (162)
||+.+... ...++.+.|........ ......++|.+...... .....+..+++|++++++.+++..
T Consensus 135 lGi~~~~v~~~~l~~l~~~~y~~~~~~~~----~~~e~~~vf~~~~~~~~-~~~~~Ev~~~~wv~~eel~~~l~~ 204 (246)
T 2pny_A 135 LGIPGEQISPEDIVFMTIYHHKAKSDRIW----GEHEICYLLLVRKNVTL-NPDPSETKSILYLSQEELWELLER 204 (246)
T ss_dssp HCCCTTTCCGGGSEEEEEEEEEEESSSSB----EEEEEEEEEEEECCCCC-CCCTTTEEEEEEECHHHHHHHHHH
T ss_pred HCCCccccCccccEEEEEEEEEecCCCce----eeeEEEEEEEEEECCCC-CCChHHeeEEEEEeHHHHHHHHHh
Confidence 99986421 13566665544321110 00113456666654322 222345588999999999987543
No 73
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.56 E-value=2.4e-14 Score=107.65 Aligned_cols=94 Identities=17% Similarity=0.049 Sum_probs=61.0
Q ss_pred EEEEEEeCCCCCeeeCCCccCCCC-CHHHHHHHHHHHHhCcccccCC-CCeeeEEeecccccccCCCCCCceEEEEEEEE
Q 031268 48 LVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGVRGLLDE-NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALE 125 (162)
Q Consensus 48 ~vLLv~r~~~~~W~lPgG~ve~gE-t~~eaa~REl~EEtGl~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 125 (162)
++||+.+. .+.|+||||++|+|| |+++||+||++||||+.+.... ..+..+...... ......++|.+.
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~--------~~~~~~~~f~~~ 136 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGS--------GPRVVAHFYAKR 136 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECS--------SSSEEEEEEEEE
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCC--------CCeEEEEEEEEE
Confidence 45665554 578999999999999 9999999999999999976421 223333211110 012345667776
Q ss_pred eccccc----------CCcccccceeEEeeHhHHh
Q 031268 126 VTEELE----------SWPEQANYKRIWVSNNHFL 150 (162)
Q Consensus 126 ~~~~~~----------~~~~~~~~~~~W~~~~ea~ 150 (162)
+..... ...+.+..++.|++++++.
T Consensus 137 l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 137 LTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp CCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred eccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 543211 1112344788999999887
No 74
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.55 E-value=7.8e-14 Score=109.34 Aligned_cols=122 Identities=12% Similarity=0.093 Sum_probs=82.0
Q ss_pred cCceeEEEEEEEeccCCcccccccccCceEEEEEEeCC-----CCCe-eeCCCccCCCCCHHHHHHHHHHHHhCcccccC
Q 031268 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDL-VFPKGGWEDDETVSEAACREALEEAGVRGLLD 92 (162)
Q Consensus 19 ~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W-~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~ 92 (162)
+-.+..|-+.+|..++ ++.++||.+|.. .+.| .+++|++++|||+.+||+||+.||+|+.....
T Consensus 115 G~~~~~vh~~~~~~~~----------~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~ 184 (300)
T 3dup_A 115 GVRAYGVHLNGYVGAG----------ADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALA 184 (300)
T ss_dssp TCCEEEEEEEEEESCG----------GGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred ceEEEEEEEEEEEecC----------CeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhh
Confidence 3446677777787653 356888888853 2669 69999999999999999999999999986532
Q ss_pred C--CCeeeEEeecccccccCCCCCCceEEEEEEEEeccccc-CCcccccceeEEeeHhHHhhhhcc
Q 031268 93 E--NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELE-SWPEQANYKRIWVSNNHFLWRKHS 155 (162)
Q Consensus 93 ~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~~~~~~~W~~~~ea~~~~~~ 155 (162)
. ..++.+.|....... ......++|.+.+..... ...++|..+++|++++|+.+++..
T Consensus 185 ~~l~~~g~i~y~~~~~~G-----~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 185 RQAIPVGAITYCMESPAG-----IKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp TTCEEEEEEEEEEEETTE-----EEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred hhccccceEEEEEecCCC-----eEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhc
Confidence 1 234555544322111 011245677776654322 223345688999999999988654
No 75
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.46 E-value=8.8e-14 Score=110.14 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=73.7
Q ss_pred CceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHh-CcccccCCCCeee
Q 031268 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEA-GVRGLLDENPLGE 98 (162)
Q Consensus 20 ~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEt-Gl~~~~~~~~l~~ 98 (162)
+++..|++|+.+. ++|||+ .+.+ |.||||.++ ++..++|+||++||| |++++.. .+++.
T Consensus 181 ~p~~~vgaii~~~--------------g~vLL~--~~~G-W~LPG~~~~--~~~~~~a~RE~~EEttGl~v~~~-~L~~v 240 (321)
T 3rh7_A 181 EGEIRLGAVLEQQ--------------GAVFLA--GNET-LSLPNCTVE--GGDPARTLAAYLEQLTGLNVTIG-FLYSV 240 (321)
T ss_dssp HSCEEEEEEEESS--------------SCEEEB--CSSE-EBCCEEEES--SSCHHHHHHHHHHHHHSSCEEEE-EEEEE
T ss_pred CCcceEEEEEEEC--------------CEEEEe--eCCC-ccCCcccCC--CChhHHHHHHHHHHhcCCEEeec-eEEEE
Confidence 4678899999874 379999 5567 999988654 444469999999997 9999877 57777
Q ss_pred EEeecccccccCCCCCCceEEEEEEEEecccccCCcccccceeEEeeHhHHhhh--hcccccccc
Q 031268 99 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWVSNNHFLWR--KHSNLVGMI 161 (162)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~W~~~~ea~~~--~~~~l~~~v 161 (162)
|+.... .....+|.+...+.. ..+++||+++|+..+ ..+..+.|+
T Consensus 241 ~~~~~~-----------~~~~i~f~~~~~~g~-------~~e~~~f~~~elp~~~~~~~~~~~~L 287 (321)
T 3rh7_A 241 YEDKSD-----------GRQNIVYHALASDGA-------PRQGRFLRPAELAAAKFSSSATADII 287 (321)
T ss_dssp EECTTT-----------CCEEEEEEEEECSSC-------CSSSEEECHHHHTTCEESSHHHHHHH
T ss_pred EEcCCC-----------ceEEEEEEEEeCCCC-------eeeeEEECHHHCCCcccCCHHHHHHH
Confidence 763321 113457777765321 257899999999876 345555543
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.44 E-value=5.7e-13 Score=98.26 Aligned_cols=116 Identities=17% Similarity=0.173 Sum_probs=72.5
Q ss_pred cCceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCCCHHHHHHHHHHHHhCc------ccccC
Q 031268 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGV------RGLLD 92 (162)
Q Consensus 19 ~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~eaa~REl~EEtGl------~~~~~ 92 (162)
.+.|.+|.+|++..+. +..+|||+++ ..+.|.||||++|+||++++|+.||+.||+|+ ..++.
T Consensus 55 ~g~R~sV~avil~~~~----------~~phVLLlq~-~~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIg 123 (208)
T 3bho_A 55 IGMRRTVEGVLIVHEH----------RLPHVLLLQL-GTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVID 123 (208)
T ss_dssp HCSEEEEEEEEEEEET----------TEEEEEEEEE-ETTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEE
T ss_pred hCCceEEEEEEEEcCC----------CCcEEEEEEc-CCCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEh
Confidence 4778888777775443 2468999997 45689999999999999999999999999994 33334
Q ss_pred CCCeeeEEeecccccccCCC-----CCCceEEEEEEEEeccccc-CCcccccceeEEeeHhHH
Q 031268 93 ENPLGEWEFRSKSRMNSCNS-----KEGGCRGYMFALEVTEELE-SWPEQANYKRIWVSNNHF 149 (162)
Q Consensus 93 ~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~f~~~~~~~~~-~~~~~~~~~~~W~~~~ea 149 (162)
..+|.|.-+... ...++. ........+|.+....... ..|. ..++.=+++=|+
T Consensus 124 -e~lg~wwRp~fe-t~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~vPk--n~kL~AvPLfel 182 (208)
T 3bho_A 124 -DCIGNWWRPNFE-PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPK--NYKLVAAPLFEL 182 (208)
T ss_dssp -EEEEEEEECSSS-SCCBSSCCTTCCSCSEEEEEEEEECCSSEEEEEET--TCEEEEEEHHHH
T ss_pred -heEEEEecCCCC-CcCCCCCCcccCchhhheeeeeEecCccceEecCC--CCeEEeecHHhh
Confidence 456665322211 111110 1122355777776654322 2222 134555565555
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.36 E-value=4.5e-13 Score=97.97 Aligned_cols=98 Identities=11% Similarity=0.041 Sum_probs=60.8
Q ss_pred cccCceeEEEEEEEeccCCcccccccccCceEEEEEEeCCCCCeeeCCCccCCCC-CHHHHHHHHHHHHhCc-ccccCCC
Q 031268 17 YEDQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGV-RGLLDEN 94 (162)
Q Consensus 17 ~~~~~r~~v~~i~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gE-t~~eaa~REl~EEtGl-~~~~~~~ 94 (162)
.+.++|+++-|++|..+.. ..--..+-. ..+|++-+..+.|+||||+||+|| |+++|+.||+.||+|+ .+... .
T Consensus 16 ~~~~~~hach~mlya~~~~--~lfg~~p~r-~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~-~ 91 (214)
T 3kvh_A 16 LGPGWSHSCHAMLYAANPG--QLFGRIPMR-FSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEA-D 91 (214)
T ss_dssp SCTTCEEEEEEEEEEEEEE--EETTTEEEE-EEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGG-G
T ss_pred hccCccEeeEEEEEcCCcc--ccccccchh-heEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeee-e
Confidence 3457899999999987530 111111112 234455555688999999999999 9999999999999997 34433 2
Q ss_pred CeeeEEeecccccccCCCCCCceEEEEEEEEecc
Q 031268 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTE 128 (162)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 128 (162)
.+.+..+... .....++|.+....
T Consensus 92 y~~s~~~~yp----------~~V~LHfY~crl~~ 115 (214)
T 3kvh_A 92 YLSSHLTEGP----------HRVVAHLYARQLTL 115 (214)
T ss_dssp EEEEEEC--------------CEEEEEEEEECCH
T ss_pred eEEEEeccCC----------CEEEEEEEEEEeeC
Confidence 3333332221 12357788887654
No 78
>2x5c_A Hypothetical protein ORF131; viral protein; HET: GOL; 1.80A {Pyrobaculum spherical virus}
Probab=24.77 E-value=1.3e+02 Score=18.90 Aligned_cols=23 Identities=22% Similarity=0.286 Sum_probs=17.5
Q ss_pred CceEEEEEEeCCCCCeeeCCCcc
Q 031268 45 KKVLVLMISTPNRDDLVFPKGGW 67 (162)
Q Consensus 45 ~~~~vLLv~r~~~~~W~lPgG~v 67 (162)
++-+.|++++.+.+.-..|+-.|
T Consensus 71 ngykylvirhpdggthtvpktdi 93 (131)
T 2x5c_A 71 NGYKYLVIRHPDGGTHTVPKTDI 93 (131)
T ss_dssp TSCEEEEEECTTSCEEECCTTCC
T ss_pred CCcEEEEEECCCCCccccccccH
Confidence 35789999998887778886543
No 79
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=20.72 E-value=43 Score=19.43 Aligned_cols=15 Identities=7% Similarity=-0.051 Sum_probs=12.9
Q ss_pred HHHHHHHhCcccccC
Q 031268 78 CREALEEAGVRGLLD 92 (162)
Q Consensus 78 ~REl~EEtGl~~~~~ 92 (162)
+|++.||||..+.+.
T Consensus 27 I~~I~e~tg~~I~i~ 41 (71)
T 1vig_A 27 INRIKDQYKVSVRIP 41 (71)
T ss_dssp HHHHHHHTCCEEECC
T ss_pred HHHHHHHHCCEEEEC
Confidence 799999999987654
Done!