BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031271
(162 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ +TA+WCGPC+FI P+ D A +V F+K+D D L A + I +PTF+ +K
Sbjct: 41 VVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDW-AIQAMPTFMFLK 99
Query: 138 RGKEIDRVVGAKKDELQMKTEKR 160
GK +D+VVGAKKDELQ K
Sbjct: 100 EGKILDKVVGAKKDELQSTIAKH 122
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
V+I +TA+WCGPC+FI P ++A + F+K+DVD L E A+ ++ ++ +PTF+ +K
Sbjct: 39 VIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYN-VEAMPTFLFIK 97
Query: 138 RGKEIDRVVGAKKDELQ 154
G E D+VVGA+KD+LQ
Sbjct: 98 DGAEADKVVGARKDDLQ 114
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
V+I +TA+WCGPC+ I P ++A + F+K+DVD L + A+A++ ++ +PTF+ +K
Sbjct: 31 VIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYN-VEAMPTFLFIK 89
Query: 138 RGKEIDRVVGAKKDELQMK 156
G+++D VVG +KD++ K
Sbjct: 90 DGEKVDSVVGGRKDDIHTK 108
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VVI +TA+WCGPC+ + P D A + + F+K+DVD L A+ F ++ +PTF+ +K
Sbjct: 37 VVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFS-VEAMPTFLFMK 95
Query: 138 RGKEIDRVVGAKKDELQMK 156
G DRVVGA K+EL K
Sbjct: 96 EGDVKDRVVGAIKEELTAK 114
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 64 NINDGGNVVFWVLKVVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKA 123
N+ + N++ K+VI + A WCGPCK ++P++ Y DV+F+K DVD P+ AK
Sbjct: 19 NLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKE 78
Query: 124 FDLIDVLPTFVLVKRGKEIDRVVGAKKDELQ 154
+ + +PTFVL K G+ I +++GA L+
Sbjct: 79 CE-VTAMPTFVLGKDGQLIGKIIGANPTALE 108
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VVI +TA+WCGP + + P D A + + F+K+DVD L A+ F ++ +PTF+ +K
Sbjct: 40 VVIDFTASWCGPSRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFS-VEAMPTFLFMK 98
Query: 138 RGKEIDRVVGAKKDELQMK 156
G DRVVGA K+EL K
Sbjct: 99 EGDVKDRVVGAIKEELTAK 117
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGPCK I P ++ FA Y+D F K+DVD + + A+ + + +PT + K
Sbjct: 29 VVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAE-VSSMPTLIFYK 87
Query: 138 RGKEIDRVVGA 148
GKE+ RVVGA
Sbjct: 88 GGKEVTRVVGA 98
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
+V+ +TA+WC PCK I P + A + +V F+K+DVD L A+ ++ ++ +PTF+ +K
Sbjct: 29 IVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWN-VEAMPTFIFLK 87
Query: 138 RGKEIDRVVGAKKDEL 153
GK +D+ VGA KD L
Sbjct: 88 DGKLVDKTVGADKDGL 103
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGPCK I P ++ FA Y+D F K+DVD + + A+ + + +PT + K
Sbjct: 22 VVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAE-VSSMPTLIFYK 80
Query: 138 RGKEIDRVVGA 148
GKE+ RVVGA
Sbjct: 81 GGKEVTRVVGA 91
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
+V+ + A WCGPC+ I P V+ A +V+F K+DVD EAA + + +PTFV +K
Sbjct: 22 IVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYS-VTAMPTFVFIK 80
Query: 138 RGKEIDRVVGAKKDELQ 154
GKE+DR GA + +L+
Sbjct: 81 DGKEVDRFSGANETKLR 97
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 65 INDGGNVVFWVLKVVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAF 124
+N+ GN + VVI + A WCGPCK I P +++ + +DV F+K+DVD + A+
Sbjct: 15 LNEAGNKL-----VVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQD- 68
Query: 125 DLIDVLPTFVLVKRGKEIDRVVGAKKDELQMKTEKRR 161
+ I +PTF+ +K G+++D + GA D+L EK +
Sbjct: 69 NQIACMPTFLFMKNGQKLDSLSGANYDKLLELVEKNK 105
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGP K I P ++ FA Y+D F K+DVD + + A+ + + +PT + K
Sbjct: 30 VVVDFFATWCGPSKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAE-VSSMPTLIFYK 88
Query: 138 RGKEIDRVVGA 148
GKE+ RVVGA
Sbjct: 89 GGKEVTRVVGA 99
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGP K I P ++ FA Y+D F K+DVD + + A+ + + +PT + K
Sbjct: 22 VVVDFFATWCGPSKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAE-VSSMPTLIFYK 80
Query: 138 RGKEIDRVVGA 148
GKE+ RVVGA
Sbjct: 81 GGKEVTRVVGA 91
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGPCK I P K+ + Y D F+K+DVD L E A+ ++ I +PTF+ +K
Sbjct: 36 VVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYN-ISAMPTFIAIK 93
Query: 138 RGKEIDRVVGA 148
G+++ VVGA
Sbjct: 94 NGEKVGDVVGA 104
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGPCK I P K+ + Y D F+K+DVD L E A+ ++ I +PTF+ +K
Sbjct: 27 VVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYN-ISAMPTFIAIK 84
Query: 138 RGKEIDRVVGA 148
G+++ VVGA
Sbjct: 85 NGEKVGDVVGA 95
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGPCK I P ++ F+ Y F K+DVD L + A+ + + +PT +L K
Sbjct: 21 VVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQK-NEVSAMPTLLLFK 79
Query: 138 RGKEIDRVVGA 148
GKE+ +VVGA
Sbjct: 80 NGKEVAKVVGA 90
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGPCK I P ++ F+ Y F K+DVD L + A+ + + +PT +L K
Sbjct: 27 VVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQK-NEVSAMPTLLLFK 85
Query: 138 RGKEIDRVVGA 148
GKE+ +VVGA
Sbjct: 86 NGKEVAKVVGA 96
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
V+ ++A WCGPCK I PY + + Y + F+ IDVD L + + +++ I PTF ++
Sbjct: 49 VLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWE-IKATPTFFFLR 107
Query: 138 RGKEIDRVVGAKKDELQMK 156
G+++D++VGA K EL K
Sbjct: 108 DGQQVDKLVGANKPELHKK 126
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAA-MYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + A WCGPCK + P +++ A TD+ K+DVD PE A+ F ++ + PT +L
Sbjct: 28 VLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSI-PTLILF 86
Query: 137 KRGKEIDRVVGAK 149
K G+ + R+VGAK
Sbjct: 87 KDGQPVKRIVGAK 99
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAA-MYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + A WCGPCK + P +++ A TD+ K+DVD PE A+ F ++ + PT +L
Sbjct: 33 VLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSI-PTLILF 91
Query: 137 KRGKEIDRVVGAK 149
K G+ + R+VGAK
Sbjct: 92 KDGQPVKRIVGAK 104
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASEXE-VKCMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECE-VKCMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
V++ + A WCGPCK I P+ ++ + YT + FIK+DVD + E + + I +PTF + K
Sbjct: 29 VIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEK-ENITSMPTFKVYK 87
Query: 138 RGKEIDRVVGAKKDELQMKTEK 159
G +D ++GA L+ EK
Sbjct: 88 NGSSVDTLLGANDSALKQLIEK 109
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESE-VKSMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECE-VKSMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WCGP K I P ++ F+ Y F K+DVD L + A+ + + +PT +L K
Sbjct: 27 VVVDFYATWCGPSKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQK-NEVSAMPTLLLFK 85
Query: 138 RGKEIDRVVGA 148
GKE+ +VVGA
Sbjct: 86 NGKEVAKVVGA 96
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DVD + A + + PTF K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDAQDVASEAE-VKATPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DVD + A + + PTF K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECE-VKCTPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DV+ + A + + +PTF K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVNDCQDVASECE-VKCMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
V+ ++A WCGP + I PY + + Y + F+ IDVD L + + +++ I PTF ++
Sbjct: 49 VLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWE-IKATPTFFFLR 107
Query: 138 RGKEIDRVVGAKKDELQMK 156
G+++D++VGA K EL K
Sbjct: 108 DGQQVDKLVGANKPELHKK 126
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAA-MYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + A WCGP K + P +++ A TD+ K+DVD PE A+ F ++ + PT +L
Sbjct: 30 VLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSI-PTLILF 88
Query: 137 KRGKEIDRVVGAK 149
K G+ + R+VGAK
Sbjct: 89 KDGQPVKRIVGAK 101
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGP K I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 34 VVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECE-VKSMPTFQFFK 92
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 93 KGQKVGEFSGANKEKLE 109
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGP K I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 23 VVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDSQDVASESE-VKSMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGP K I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 23 VVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECE-VKRMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGP K I+P+ + Y++V F+++DVD + A + + PTF K
Sbjct: 23 VVVDFSATWCGPAKMIKPFFHSLSEKYSNVIFLEVDVDDAQDVASEAE-VKATPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + AAWCGPC+ + P +++FA + D V K++VD PE F ++ + PT +L
Sbjct: 20 VLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSI-PTLILF 78
Query: 137 KRGKEIDRVVGAKKDE 152
K G+ + +++G + E
Sbjct: 79 KGGRPVKQLIGYQPKE 94
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + AAWCGPC+ + P +++FA + D V K++VD PE F ++ + PT +L
Sbjct: 20 VLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSI-PTLILF 78
Query: 137 KRGKEIDRVVGAKKDE 152
K G+ + +++G + E
Sbjct: 79 KGGRPVKQLIGYQPKE 94
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + AAWCGPC+ + P +++FA + D V K++VD PE F ++ + PT +L
Sbjct: 20 VLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSI-PTLILF 78
Query: 137 KRGKEIDRVVGAKKDE 152
K G+ + +++G + E
Sbjct: 79 KGGEPVKQLIGYQPKE 94
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + AAWCGPC+ + P +++FA + D V K++VD PE F ++ + PT +L
Sbjct: 20 VLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSI-PTLILF 78
Query: 137 KRGKEIDRVVGAKKDE 152
K G+ + +++G + E
Sbjct: 79 KGGEPVKQLIGYQPKE 94
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD--VQFIKIDVDWLPEAAKAFDLIDVLPTFVL 135
VVI + A WCGPCK I P + + V F K+DVD + A+ I +PTFV
Sbjct: 36 VVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVG-IRAMPTFVF 94
Query: 136 VKRGKEIDRVVGAKKDELQ 154
K G++ID VVGA +LQ
Sbjct: 95 FKNGQKIDTVVGADPSKLQ 113
>pdb|1R26|A Chain A, Crystal Structure Of Thioredoxin From Trypanosoma Brucei
Brucei
Length = 125
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVKR 138
V ++TA WCGPCK IE ++ A + V+F K+D D E ++ LPTF++ +
Sbjct: 41 VAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQ-LPTFIIARS 99
Query: 139 GKEIDRVVGAKKDELQMK 156
GK + V+GA L+ K
Sbjct: 100 GKMLGHVIGANPGMLRQK 117
>pdb|1ERW|A Chain A, Human Thioredoxin Double Mutant With Cys 32 Replaced By
Ser And Cys 35 Replaced By Ser
Length = 105
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A W GP K I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 23 VVVDFSATWSGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECE-VKCMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
++ + A WCGPCK I P +++ AA Y +K+DVD P A ++++ + PT ++ K
Sbjct: 24 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSI-PTLIVFK 82
Query: 138 RGKEIDRVVGAKKDE 152
G+ +D+VVG + E
Sbjct: 83 DGQPVDKVVGFQPKE 97
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DVD + A + + +PTF K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDXQDVASEXE-VKCMPTFQFFK 81
Query: 138 RGKEIDRVVGAKKDELQ 154
+G+++ GA K++L+
Sbjct: 82 KGQKVGEFSGANKEKLE 98
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ ++A WCGPCK I+P+ + Y++V F+++DVD + A + I +PT +L K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDAQDVAPKYG-IRGIPTLLLFK 81
Query: 138 RGKEIDRVVGA 148
G+ VGA
Sbjct: 82 NGEVAATKVGA 92
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
VV+ + A WCGPCK I P + + + + D V +K+DVD + A ++ I +PTFV +
Sbjct: 23 VVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYN-ISSMPTFVFL 81
Query: 137 KRGKEIDRVVGAKKDELQ 154
K G +++ GA L+
Sbjct: 82 KNGVKVEEFAGANAKRLE 99
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
VV+ + A WCGPCK I P + + + + D V +K+DVD + A ++ I +PTFV +
Sbjct: 28 VVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYN-ISSMPTFVFL 86
Query: 137 KRGKEIDRVVGAKKDELQ 154
K G +++ GA L+
Sbjct: 87 KNGVKVEEFAGANAKRLE 104
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 41 SDRLVMTNETGFCLIYCINEMVLNINDG--GNVVFWVLKVVIYYTAAWCGPCKFIEPYVK 98
SDRL + G C I V I+ L +++ + A WCGPC+ + P +
Sbjct: 28 SDRLAAGPKCGICGAGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQ 87
Query: 99 DFAA-MYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVKRGKEIDRVVGAK 149
AA + V+ KID P A I +P F+L +G+E+ R GA+
Sbjct: 88 AAAATLAGQVRLAKIDTQAHPAVA-GRHRIQGIPAFILFHKGRELARAAGAR 138
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
++ + A WCG CK I P +++ AA Y +K+DVD P A ++++ + PT ++ K
Sbjct: 23 LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSI-PTLIVFK 81
Query: 138 RGKEIDRVVGAKKDE 152
G+ +D+VVG + E
Sbjct: 82 DGQPVDKVVGFQPKE 96
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
++ + A WCG CK I P +++ AA Y +K+DVD P A ++++ + PT ++ K
Sbjct: 24 LVDFWATWCGTCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSI-PTLIVFK 82
Query: 138 RGKEIDRVVGAKKDE 152
G+ +D+VVG + E
Sbjct: 83 DGQPVDKVVGFQPKE 97
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
V++ + A WCGPC+ + + A DV FIK+DVD AA A+ + + F + K
Sbjct: 26 VLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSSIPALFFVKK 85
Query: 138 RGKEI---DRVVGAKKDELQMKTEK 159
G EI D+ VGA ++ EK
Sbjct: 86 EGNEIKTLDQFVGADVSRIKADIEK 110
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + A WCGPCK I P + + + V K+++D PE A+ + +PT +LV
Sbjct: 23 VLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQ-VRSIPTLMLV 81
Query: 137 KRGKEIDRVVGA 148
+ GK ID+ VGA
Sbjct: 82 RDGKVIDKKVGA 93
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVKR 138
V+ + A WC PC + P +++ A Y V F K++ D P+ A + ++ LPT + K
Sbjct: 20 VVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMS-LPTVIFFKD 78
Query: 139 GKEIDRVVGA-KKDELQMK 156
G+ +D ++GA ++E++++
Sbjct: 79 GEPVDEIIGAVPREEIEIR 97
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 84 AAWCGPCKFIEPYVKDFAAMYT-DVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVKRGKEI 142
A CGPCK I P +++ AA Y +K+DVD P A ++++ + PT ++ K G+ +
Sbjct: 28 ATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSI-PTLIVFKDGQPV 86
Query: 143 DRVVGAKKDE 152
D+VVG + E
Sbjct: 87 DKVVGFQPKE 96
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 76 LKVVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFV 134
+ V++ + A WCGPC+ I P V + A Y D ++ +K++ D P A + I +PT +
Sbjct: 20 VPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYG-IRSIPTIM 78
Query: 135 LVKRGKEIDRVVGA 148
+ K GK+ + ++GA
Sbjct: 79 VFKGGKKCETIIGA 92
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ WCGPCK + P + A Y DV F+K+D + + I V+PTF ++K
Sbjct: 40 VVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILK 99
Query: 138 RGKEIDRVVGAKKDELQMKTEKRRN 162
+ V GAK D+L + R+
Sbjct: 100 ENSVVGEVTGAKYDKLLEAIQAARS 124
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ WCGPCK + P + A Y DV F+K+D + + I V+PTF ++K
Sbjct: 28 VVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILK 87
Query: 138 RGKEIDRVVGAKKDELQMKTEKRRN 162
+ V GAK D+L + R+
Sbjct: 88 ENSVVGEVTGAKYDKLLEAIQAARS 112
>pdb|2DIY|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Like Protein 2
Length = 130
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
+V+++ A W C + + + A V F+K++ + +PE ++ ++ I +PTF+ K
Sbjct: 41 LVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYE-ISSVPTFLFFK 99
Query: 138 RGKEIDRVVGAKKDELQMKTEKRRN 162
++IDR+ GA EL K ++ +
Sbjct: 100 NSQKIDRLDGAHAPELTKKVQRHAS 124
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + AAWCGPC+ I P ++ AA Y D ++ +K+++D P A + ++ + PT +
Sbjct: 26 VLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSI-PTLNVY 84
Query: 137 KRGKEIDRVVGAK 149
+ G+ +VGAK
Sbjct: 85 QGGEVAKTIVGAK 97
>pdb|2WZ9|A Chain A, Crystal Structure Of The Thioredoxin Domain Of Human Txnl2
Length = 153
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
+V+++ A W C + + + A V F+K++ + +PE ++ ++ I +PTF+ K
Sbjct: 35 LVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYE-ISSVPTFLFFK 93
Query: 138 RGKEIDRVVGAKKDELQMKTEKRRN 162
++IDR+ GA EL K ++ +
Sbjct: 94 NSQKIDRLDGAHAPELTKKVQRHAS 118
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 63 LNINDGGN----VVFWVLKVVIYYTAAWCGPCKFIEPYVKDFAA-MYTDVQFIKIDVDWL 117
NI DG + VV VV+ + A WCGPCK + P ++ A + V K+D+D
Sbjct: 15 FNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDH 74
Query: 118 PEAAKAFDLIDVLPTFVLVKRGKEIDRVVGAKKDELQMKT 157
+ A ++ + +PT + +K G +D+ VG KDE Q++
Sbjct: 75 TDLAIEYE-VSAVPTVLAMKNGDVVDKFVGI-KDEDQLEA 112
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
++ + A WCG K I P +++ AA Y +K+DVD P A ++++ + PT ++ K
Sbjct: 24 LVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSI-PTLIVFK 82
Query: 138 RGKEIDRVVGAKKDE 152
G+ +D+VVG + E
Sbjct: 83 DGQPVDKVVGFQPKE 97
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++Y+ A+WCGPC+ + P + A Y+D ++ +K+++D P K + ++ +P LV
Sbjct: 28 VLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYK-VEGVPALRLV 86
Query: 137 KRGKEIDRVVGA-KKDEL 153
K + +D G KD+L
Sbjct: 87 KGEQILDSTEGVISKDKL 104
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFI-KIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + A WC PC+ I P +++ A Y + K+DVD P+ A + + + PT +L
Sbjct: 22 VLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSI-PTVILF 80
Query: 137 KRGKEIDRVVGAK-KDELQMKTEK 159
K G+ ++ +VGA+ K Q K EK
Sbjct: 81 KDGQPVEVLVGAQPKRNYQAKIEK 104
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFI-KIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + A WC PC+ I P +++ A Y + K+DVD P+ A + + + PT +L
Sbjct: 21 VLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSI-PTVILF 79
Query: 137 KRGKEIDRVVGAK-KDELQMKTEK 159
K G+ ++ +VGA+ K Q K EK
Sbjct: 80 KDGQPVEVLVGAQPKRNYQAKIEK 103
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V++ + A WCGPC+ I P +++ A Y V+ +K++VD P A + I +PT +L
Sbjct: 22 VLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYG-IRSIPTLLLF 80
Query: 137 KRGKEIDRVVGAKKDE 152
K G+ +DR+VGA+ E
Sbjct: 81 KNGQVVDRLVGAQPKE 96
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ + A WC PC + P +++ A Y V F K++ + + A + ++ LPT + K
Sbjct: 26 VVVDFWAEWCAPCLILAPVIEELANDYPQVAFGKLNTEESQDIAMRYGIMS-LPTIMFFK 84
Query: 138 RGKEIDRVVGA-KKDELQMK 156
G+ +D+++GA ++E++++
Sbjct: 85 NGELVDQILGAVPREEIEVR 104
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF-AAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V+ + A WCGPCK I P +++ M ++ +KIDVD E A + ++ + PT +++
Sbjct: 20 VLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSI-PTLLVL 78
Query: 137 KRGKEIDRVVGAKKDE 152
K G+ ++ VG K E
Sbjct: 79 KDGEVVETSVGFKPKE 94
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 76 LKVVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFV 134
L VI + A WCGPC+ P + AA V+F+K++ + P + F I +PT
Sbjct: 56 LPXVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRF-RIRSIPTIX 114
Query: 135 LVKRGKEIDRVVGA 148
L + GK ID + GA
Sbjct: 115 LYRNGKXIDXLNGA 128
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+V+ +TA WCGPCK I P + + Y V F+K+DVD + A+A I +PTF +
Sbjct: 27 IVVAFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAG-ITAMPTFHVY 85
Query: 137 KRGKEIDRVVGAKKDELQMKTEKR 160
K G + D +VGA +D+L+ K
Sbjct: 86 KDGVKADDLVGASQDKLKALVAKH 109
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 76 LKVVIYYTAAWCGPCKFIEPYVKDFAAMYT-DVQFIKIDVDWLPEAAKAFDLIDVLPTFV 134
+ V++ + A WCGPCK I P + + A Y+ + K++ D P A ++ I +PT +
Sbjct: 18 VPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYN-IRSIPTVL 76
Query: 135 LVKRGKEIDRVVGA 148
K G+ + ++GA
Sbjct: 77 FFKNGERKESIIGA 90
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 76 LKVVIYYTAAWCGPCKFIEPYVKDFAAMYT-DVQFIKIDVDWLPEAAKAFDLIDVLPTFV 134
+ V++ + A WCGPCK I P + + A Y+ + K++ D P A ++ I +PT +
Sbjct: 19 VPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYN-IRSIPTVL 77
Query: 135 LVKRGKEIDRVVGA 148
K G+ + ++GA
Sbjct: 78 FFKNGERKESIIGA 91
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
VV+ WCGP K + P + A Y DV F+K+D + + I V+PTF ++K
Sbjct: 27 VVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILK 86
Query: 138 RGKEIDRVVGAKKDELQMKTEKRRN 162
+ V GAK D+L + R+
Sbjct: 87 ENSVVGEVTGAKYDKLLEAIQAARS 111
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
++ + A WCGPC+ + P +++ A + ++ +K++VD P A + + V PT VL +
Sbjct: 54 LVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSV-PTLVLFR 112
Query: 138 RGKEIDRVVGA 148
RG + VGA
Sbjct: 113 RGAPVATWVGA 123
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+V+ +TA WCGPCK I P + + Y V F+K+DVD + A+A I +PTF +
Sbjct: 27 IVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAG-ITAMPTFHVY 85
Query: 137 KRGKEIDRVVGAKKDELQMKTEKR 160
K G + D +VGA +D+L+ K
Sbjct: 86 KDGVKADDLVGASQDKLKALVAKH 109
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF-AAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V+ + A WCGP K I P +++ M ++ +KIDVD E A + ++ + PT +++
Sbjct: 20 VLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSI-PTLLVL 78
Query: 137 KRGKEIDRVVGAKKDE 152
K G+ ++ VG K E
Sbjct: 79 KDGEVVETSVGFKPKE 94
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF-AAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
V+ + A WCGP K I P +++ M ++ +KIDVD E A + ++ + PT +++
Sbjct: 20 VLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSI-PTLLVL 78
Query: 137 KRGKEIDRVVGAKKDE 152
K G+ ++ VG K E
Sbjct: 79 KDGEVVETSVGFKPKE 94
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + D A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 76 LKVVIYYTAAWCGPCKFIEPYVKDFAAMYT-DVQFIKIDVDWLPEAAKAFDLIDVLPTFV 134
+ V++ + A WCGP K I P + + A Y+ + K++ D P A ++ I +PT +
Sbjct: 19 VPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYN-IRSIPTVL 77
Query: 135 LVKRGKEIDRVVGA 148
K G+ + ++GA
Sbjct: 78 FFKNGERKESIIGA 91
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P +++ A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRSIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 33 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 91
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 92 KNGEVAATKVGA 103
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFI-KIDVDWLPEAAKAFDLIDVLPTFVLV 136
++ + A WCGPCK + P +++ + Y +I K++VD PE A+ F I +PT V
Sbjct: 54 AIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFG-IQSIPTIWFV 112
Query: 137 KRGKEIDRVVGA 148
E +GA
Sbjct: 113 PMKGEPQVNMGA 124
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFI-KIDVDWLPEAAKAFDLIDVLPTFVLV 136
++ + A WCGPCK + P +++ + Y +I K++VD PE A+ F I +PT V
Sbjct: 54 AIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFG-IQGIPTIWFV 112
Query: 137 KRGKEIDRVVGA 148
E +GA
Sbjct: 113 PMKGEPQVNMGA 124
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 62 VLNINDGGNVVFWVLK------VVIYYTAAWCGPCKFIEPYVKDFA--AMYTDVQFIKID 113
V+ IND + +V+Y+ +W PCK ++ + + ++V F+ ID
Sbjct: 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSID 61
Query: 114 VDWLPEAAKAFDLIDVLPTFVLVKRGKEIDRVVGAKKDELQMKTEKRRN 162
D E ++ F+ I +P F+++ +G + + GA E E +N
Sbjct: 62 ADENSEISELFE-ISAVPYFIIIHKGTILKELSGADPKEYVSLLEDXKN 109
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G VGA
Sbjct: 82 KNGDVAATKVGA 93
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I PT +L
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGTPTLLLF 82
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 83 KNGEVAATKVGA 94
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAACKVGA 93
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPC+ I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I P + + A Y + K+++D P A + + +PT +L
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKY-IERGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|1GH2|A Chain A, Crystal Structure Of The Catalytic Domain Of A New Human
Thioredoxin-Like Protein
Length = 107
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVK 137
V+ +T CGPC I P + Y F+++DV + A + I PTF +
Sbjct: 24 AVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQC-QGTAATNNISATPTFQFFR 82
Query: 138 RGKEIDRVVGAKKDELQMKTEK 159
ID+ GA L+ K ++
Sbjct: 83 NKVRIDQYQGADAVGLEEKIKQ 104
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGPCK I + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGP K I P + + A Y + K+++D P A + I +PT +L
Sbjct: 43 ILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 101
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 102 KNGEVAATKVGA 113
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 84 AAWCGPCKFIEPYVKDFAAMYT-DVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVKRGKEI 142
A WC PC EP K A Y F +++VD + A + ++++ PT ++ G+ +
Sbjct: 30 AEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNI-PTTLIFVNGQLV 88
Query: 143 DRVVGA 148
D +VGA
Sbjct: 89 DSLVGA 94
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCGP K I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WCG CK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|3CXG|A Chain A, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
pdb|3CXG|B Chain B, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
Length = 133
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTF 133
+VI + A WC PC I+ Y K+ Y V + IDVD P+ + I LPTF
Sbjct: 43 IVIKFGAVWCKPCNKIKEYFKN-QLNYYYVTLVDIDVDIHPKLNDQHN-IKALPTF 96
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAA-MYTDVQFIKIDVDWLPEAAKAFDLIDV--LPTFV 134
++I +T +WC PCK ++P ++ A+ M D++F +D + +A K +++ LP+
Sbjct: 20 IIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAE---DAEKTMAELNIRTLPSLA 76
Query: 135 LVKRG 139
L G
Sbjct: 77 LFVDG 81
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFI--KIDVDWLPEAAKAFDLIDVLPTFVL 135
++ + A WCGPCK + P + + A Y D Q + K+D + E A AF + + +
Sbjct: 41 AIVDFYADWCGPCKMVAPILDELAKEY-DGQIVIYKVDTEKEQELAGAFGIRSIPSILFI 99
Query: 136 VKRGK 140
GK
Sbjct: 100 PMEGK 104
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 62 VLNINDGGNVVFWVLKVVIYYTAAWCGPCKFIEPYVKDFAAMYTD----VQFIKIDVDWL 117
VLN + N V V++ + A WCG CK P + A+ D + KID
Sbjct: 21 VLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 80
Query: 118 PEAAKAFDLIDVLPTFVLVKRGKEIDRVVGAKKDELQMK 156
A FD + PT ++K+G+ +D ++E+ K
Sbjct: 81 SMLASKFD-VSGYPTIKILKKGQAVDYDGSRTQEEIVAK 118
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 61 MVLNINDGGNVVFWVLKVVIYYTAAWCGPCKFIEPYVKDFAAMYTD----VQFIKIDVDW 116
+VLN + N V V++ + A WCG CK P + A + D + KID
Sbjct: 18 LVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS 77
Query: 117 LPEAAKAFDLIDVLPTFVLVKRGKEIDRVVGAKKDELQMK 156
A FD + PT ++K+G+ +D ++E+ K
Sbjct: 78 ASVLASRFD-VSGYPTIKILKKGQAVDYEGSRTQEEIVAK 116
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 78 VVIYYTAAWCGPCKFIEP----YVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTF 133
+++ + A WCG CK + P K+ + + K+D + AK FD + PT
Sbjct: 150 ILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFD-VSGYPTL 208
Query: 134 VLVKRGKEID 143
+ ++G+ D
Sbjct: 209 KIFRKGRPYD 218
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTD--VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+I + A WC C+ ++P + FA D V K+DV P + F +I+ LPT
Sbjct: 26 MIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRF-IINALPTIYHC 84
Query: 137 KRGKEIDRVVG--AKKDELQMKTEK 159
K G E R G KKD + ++K
Sbjct: 85 KDG-EFRRYQGPRTKKDFINFISDK 108
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMY----TDVQFIKIDVDWLPEAAKAFDLIDVLPTF 133
V++ Y A WCG CK + P ++ A Y +DV K+D E +I+ PT
Sbjct: 379 VLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLD---HTENDVRGVVIEGYPTI 435
Query: 134 VLVKRGKEIDRVV 146
VL GK+ + VV
Sbjct: 436 VLYPGGKKSESVV 448
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 78 VVIYYTAAWCGPCKFIEP----YVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTF 133
+++ + A WCG CK + P K+ + + K+D + AK FD + PT
Sbjct: 27 ILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFD-VSGYPTL 85
Query: 134 VLVKRGKEID 143
+ ++G+ D
Sbjct: 86 KIFRKGRPFD 95
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 64 NINDGGNVVFWVLKVVIYYTAAWCGPCKFIEPYVKDFAAMY-TDVQFIKIDVDWLPEAAK 122
NI +G N+ V +V+Y+ A WC C + Y + +K+D+D A+
Sbjct: 33 NIINGVNMKNTV--IVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLAR 90
Query: 123 AFDLIDVLPTFVLVKRGKEIDRVVGAKKDEL 153
F + LPT +L+K ++ + A+KD
Sbjct: 91 KFS-VKSLPTIILLK-----NKTMLARKDHF 115
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
+++ + A WC CK I P + + A Y + K+++D P A + I +PT +L
Sbjct: 23 ILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYG-IRGIPTLLLF 81
Query: 137 KRGKEIDRVVGA 148
K G+ VGA
Sbjct: 82 KNGEVAATKVGA 93
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
Length = 121
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQF------IKID--VDWLPEAAKAFDLIDV 129
V+I + A WCG CK + P ++ A+Y +F K+D + +P+ + F I +
Sbjct: 28 VLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPDEIQGFPTIKL 87
Query: 130 LPT 132
P
Sbjct: 88 YPA 90
>pdb|3HZ4|A Chain A, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
pdb|3HZ4|B Chain B, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
Length = 140
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMY-TDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLV 136
VV +Y+ A C CK EPY +++A Y + F +I++ P A+ + + PTF
Sbjct: 28 VVXFYSPA-CPYCKAXEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYG-VQGTPTFKFF 85
Query: 137 KRGKEIDRVVG---------AKKDELQMKTE 158
G+ + VG A +D LQ E
Sbjct: 86 CHGRPVWEQVGQIYPSILKNAVRDXLQHGEE 116
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 78 VVIYYTAAWCGP--------------CKFIEPYVKDFAAMYTD-VQFIKIDVDWLPEAAK 122
+++ + A WCGP CK I P + + A Y + K+++D P A
Sbjct: 24 ILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 83
Query: 123 AFDLIDVLPTFVLVKRGKEIDRVVGA 148
+ I +PT +L K G+ VGA
Sbjct: 84 KYG-IRGIPTLLLFKNGEVAATKVGA 108
>pdb|2LS5|A Chain A, Solution Structure Of A Putative Protein Disulfide
Isomerase From Bacteroides Thetaiotaomicron
Length = 159
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 60 EMVLNINDGGNVVFWVLK---VVIYYTAAWCGPCKFIEPYV-KDFAAMY---TDVQFIKI 112
+ + + DG V L+ V++ +TA+WCG C+ P++ KD + D I I
Sbjct: 15 DFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGI 74
Query: 113 DVDWLPEAAKAF 124
D D E AF
Sbjct: 75 DRDEPLEKVLAF 86
>pdb|2L6C|A Chain A, Solution Structure Of Desulfothioredoxin From
Desulfovibrio Vulgaris Hildenborough In Its Oxidized
Form
pdb|2L6D|A Chain A, Solution Structure Of Desulfothioredoxin From
Desulfovibrio Vulgaris Hildenborough In Its Reduced Form
Length = 110
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVKR 138
++++ C CK +E + F A V +D + PE K + +PT V ++
Sbjct: 23 IVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGF-ERVPTLVFIRD 81
Query: 139 GK 140
GK
Sbjct: 82 GK 83
>pdb|1OC9|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAF-DLIDVLPTFVLV 136
V Y++A+WC PC+ P + DF + + + ++ + E+A+ F D +P L
Sbjct: 34 VFFYFSASWCPPCRAFTPQLIDFYKAHAESKNFEVMLISWDESAEDFKDYYAKMPWLALP 93
Query: 137 ---KRG----------KEIDRVVGAKKDELQMKTEKRRN 162
++G K I +VG + D + T + R
Sbjct: 94 FEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQART 132
>pdb|3S9F|A Chain A, The Structure Of Tryparedoxin I From Leishmania Major
Length = 165
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKI 112
V Y++A+WC PC+ P + +F + D + +I
Sbjct: 51 VFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEI 85
>pdb|2LJA|A Chain A, Solution Structure Of A Putative Thiol-Disulfide
Oxidoreductase From Bacteroides Vulgatus
Length = 152
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 84 AAWCGPCKFIEPYVKDFAAMYT--DVQFIKIDVD 115
A WCGPC+ P +K+ Y D+ F+ + D
Sbjct: 39 ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCD 72
>pdb|1O81|A Chain A, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1O81|B Chain B, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1OC9|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAF-DLIDVLPTFVLV 136
V Y++A+WC PC+ P + DF + + + ++ + E+A+ F D +P L
Sbjct: 34 VFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 93
Query: 137 ---KRG----------KEIDRVVGAKKDELQMKTEKRRN 162
++G K I +VG + D + T + R
Sbjct: 94 FEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQART 132
>pdb|1O6J|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
pdb|1O6J|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
Length = 150
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAF-DLIDVLPTFVLV 136
V Y++A+WC PC+ P + DF + + + ++ + E+A+ F D +P L
Sbjct: 32 VFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 91
Query: 137 ---KRG----------KEIDRVVGAKKDELQMKTEKRRN 162
++G K I +VG + D + T + R
Sbjct: 92 FEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQART 130
>pdb|1FG4|A Chain A, Structure Of Tryparedoxin Ii
pdb|1FG4|B Chain B, Structure Of Tryparedoxin Ii
Length = 149
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF 100
V Y++A+WC PC+ P + DF
Sbjct: 31 VFFYFSASWCPPCRAFTPQLIDF 53
>pdb|1O73|A Chain A, Tryparedoxin From Trypanosoma Brucei
Length = 144
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF 100
V +Y++A+WC PC+ P + +F
Sbjct: 31 VFLYFSASWCPPCRGFTPVLAEF 53
>pdb|2KUC|A Chain A, Solution Structure Of A Putative Disulphide-Isomerase From
Bacteroides Thetaiotaomicron
Length = 130
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 86 WCGPCKFIEPYV-KD-FAAMYTDVQFIKIDVDWLPEAAKAFDL-----IDVLPTFVLV-K 137
WCGPCK + V KD A Y + F+ + +D E + +L + PT + +
Sbjct: 38 WCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDM--EKGEGVELRKKYGVHAYPTLLFINS 95
Query: 138 RGKEIDRVVGAK 149
G+ + R+VGA+
Sbjct: 96 SGEVVYRLVGAE 107
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFA 101
V+I + A WCG CK +EP K+
Sbjct: 373 VLIEFYAPWCGHCKNLEPKYKELG 396
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFA 101
V+I + A WCG CK +EP K+
Sbjct: 48 VLIEFYAPWCGHCKNLEPKYKELG 71
>pdb|1OKD|A Chain A, Nmr-Structure Of Tryparedoxin 1
Length = 154
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF 100
V Y++A+WC PC+ P + +F
Sbjct: 31 VFFYFSASWCPPCRGFTPQLIEF 53
>pdb|1EZK|A Chain A, Crystal Structure Of Recombinant Tryparedoxin I
Length = 153
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF 100
V Y++A+WC PC+ P + +F
Sbjct: 30 VFFYFSASWCPPCRGFTPQLIEF 52
>pdb|1QK8|A Chain A, Tryparedoxin-I From Crithidia Fasciculata
pdb|1O7U|A Chain A, Radiation Induced Tryparedoxin-I
pdb|1O85|A Chain A, Radiation-Reduced Tryparedoxin-I
pdb|1O8W|A Chain A, Radiation-Reduced Tryparedoxin-I
Length = 146
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF 100
V Y++A+WC PC+ P + +F
Sbjct: 31 VFFYFSASWCPPCRGFTPQLIEF 53
>pdb|1EWX|A Chain A, Crystal Structure Of Native Tryparedoxin I From Crithidia
Fasciculata
Length = 146
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDF 100
V Y++A+WC PC+ P + +F
Sbjct: 31 VFFYFSASWCPPCRGFTPQLIEF 53
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMY 104
V+I + A WCG CK +EP Y
Sbjct: 28 VLIEFYAPWCGHCKQLEPIYTSLGKKY 54
>pdb|2LUS|A Chain A, Nmr Structure Of Carcinoscorpius Rotundicauda Thioredoxin
Related Protein 16 And Its Role In Regulating
Transcription Factor Nf-Kb Activity
Length = 143
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDV 107
+ Y++A WC PC+ P + D MY+++
Sbjct: 29 IGFYFSAHWCPPCRGFTPILAD---MYSEL 55
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYT-DVQFIKIDVDWLPEAAK 122
V+ + A WCGPC+ P + A M V+ K+D P+ +
Sbjct: 25 VVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQ 69
>pdb|1I5G|A Chain A, Tryparedoxin Ii Complexed With Glutathionylspermidine
Length = 144
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 14/99 (14%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAF-DLIDVLPTFVLV 136
V Y++A+WC P + P + DF + + + ++ + E+A+ F D +P L
Sbjct: 31 VFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 90
Query: 137 ---KRG----------KEIDRVVGAKKDELQMKTEKRRN 162
++G K I +VG + D + T + R
Sbjct: 91 FEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQART 129
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 77 KVVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFD 125
KVV+ Y K E V + A+ +D IK D+ +PE K FD
Sbjct: 44 KVVVNY----ANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 77 KVVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFD 125
KVV+ Y K E V + A+ +D IK D+ +PE K FD
Sbjct: 44 KVVVNY----ANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88
>pdb|3GL3|A Chain A, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|B Chain B, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|C Chain C, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|D Chain D, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
Length = 152
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPT 132
V + + A+WCGPC+ P+ A Y F + V+ + A + +P
Sbjct: 31 VYLDFWASWCGPCRQSFPWXNQXQAKYKAKGFQVVAVNLDAKTGDAXKFLAQVPA 85
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKI 112
V + + A WCG CK + P Y D + I I
Sbjct: 270 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVI 304
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 78 VVIYYTAAWCGPCKFIEP-YVK---DFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTF 133
+++ + A WCG CK + P Y K A ++++ K+D + A+ + + PT
Sbjct: 27 LLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYG-VRGYPTI 85
Query: 134 VLVKRG 139
+ G
Sbjct: 86 KFFRNG 91
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 78 VVIYYTAAWCGPCKFIEPYVKDFAAMYTDVQFIKI 112
V + + A WCG CK + P Y D + I I
Sbjct: 28 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVI 62
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 79 VIYYTAAWCGPCKFIEPYVKDFAAMYTDVQ 108
++ + A WCG CK +EP ++AA ++V+
Sbjct: 29 MVEFYAPWCGHCKNLEP---EWAAAASEVK 55
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 83 TAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVKRGKEI 142
T +CG +++ P + + V DW A +D++ P F R K I
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAV-------DWWSLGALMYDMLTGAPPFTGENRKKTI 230
Query: 143 DRVVGAK 149
D+++ K
Sbjct: 231 DKILKCK 237
>pdb|3ERW|A Chain A, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|B Chain B, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|C Chain C, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|D Chain D, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|E Chain E, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|F Chain F, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|G Chain G, Crystal Structure Of Stoa From Bacillus Subtilis
Length = 145
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 77 KVVIYYTAAWCGPCKFIEPYVKDF 100
K ++++ +WC PCK P + F
Sbjct: 36 KTILHFWTSWCPPCKKELPQFQSF 59
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 83 TAAWCGPCKFIEPYVKDFAAMYTDVQFIKIDVDWLPEAAKAFDLIDVLPTFVLVKRGKEI 142
T +CG +++ P + + V DW A +D++ P F R K I
Sbjct: 178 THXFCGTIEYMAPEILMRSGHNRAV-------DWWSLGALMYDMLTGAPPFTGENRKKTI 230
Query: 143 DRVVGAK 149
D+++ K
Sbjct: 231 DKILKCK 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,741,291
Number of Sequences: 62578
Number of extensions: 175864
Number of successful extensions: 652
Number of sequences better than 100.0: 152
Number of HSP's better than 100.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 441
Number of HSP's gapped (non-prelim): 155
length of query: 162
length of database: 14,973,337
effective HSP length: 91
effective length of query: 71
effective length of database: 9,278,739
effective search space: 658790469
effective search space used: 658790469
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)