Your job contains 1 sequence.
>031272
MGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCK
ATILVKMEKSGKWVVTRFIKDHNHPLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY
REKLFNFMNNVEEQTEELSSKIQVIVDNIRKVESEMLKSFLQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031272
(162 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 432 1.2e-40 1
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 385 1.2e-35 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 290 1.4e-25 1
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 274 6.8e-24 1
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 232 1.3e-22 2
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 158 2.4e-10 1
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 155 4.6e-10 1
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 155 4.8e-10 1
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 146 4.6e-09 1
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 130 6.5e-09 2
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 143 8.4e-09 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 110 6.5e-07 2
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 114 9.7e-06 1
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 84/155 (54%), Positives = 113/155 (72%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
Y++R+GFVVR+MQRRRS DG TLARRLGCNKQGF PN++ ++ S+REGCKAT
Sbjct: 29 YSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQRSSSSSS----SSREGCKAT 84
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPL-VVTANGYSTVGDKDKKIXXXXXXXXXXXXXCAAYR 121
ILVKMEKSGKWVVTRFIK+HNH L + ++ Y + DK++KI C YR
Sbjct: 85 ILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDSFADKERKIKELTEEIECQDRLCDVYR 144
Query: 122 EKLFNFMNNVEEQTEELSSKIQVIVDNIRKVESEM 156
++L +F++NVE TEELS K++ IV+N++K+E ++
Sbjct: 145 DRLVSFIDNVEHYTEELSLKVRDIVENVKKLECQI 179
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 72/152 (47%), Positives = 103/152 (67%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
Y+RR+GFV+R+M RRS DG LARR GCNK+G + +G G +KPRPS REGCKA
Sbjct: 41 YSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIRGKFGSVRKPRPSTREGCKAM 100
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLVVTAN-GYSTVGDKDKKIXXXXXXXXXXXXXCAAYR 121
I VK ++SGKWV+T+F+K+HNHPLVV+ T+ +KDK+I CAAY+
Sbjct: 101 IHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLDEKDKRIQELTIELRNKKRLCAAYK 160
Query: 122 EKLFNFMNNVEEQTEELSSKIQVIVDNIRKVE 153
E+L F VEE + +++ K++ +V+N+++ E
Sbjct: 161 EQLDAFAKIVEEHSNQIAKKVENVVNNLKEFE 192
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 65/159 (40%), Positives = 89/159 (55%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA MGFV+R+ RRS DGT + RRL CNK+GF S+ +KPR REGCKA
Sbjct: 52 YATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFR-RSRPRRSESRKPRAITREGCKAL 110
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLV-----VTANGY--STVGDKDKKIXXXXXXXXXXXX 115
I+VK EKSG W+VT+F K+HNHPL+ V N T +KD KI
Sbjct: 111 IVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLPQTPDEKDAKIRELSAELSRERR 170
Query: 116 XCAAYREKLFNFMNNVEEQTEELSSKIQVIVDNIRKVES 154
C A +++L + +EE + L+ I ++ ++R +ES
Sbjct: 171 RCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIES 209
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 59/155 (38%), Positives = 85/155 (54%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA ++GFV+R+ + RSR DG+ + R+L CNK+G+ SK + R R GCKA
Sbjct: 89 YATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSK--RDKVIRQRAETRVGCKAM 146
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLVV--TANG--YSTVGDKDKKIXXXXXXXXXXXXXCA 118
IL++ E SGKWV+T+F+K+HNH L+ G Y ++ KI A
Sbjct: 147 ILIRKENSGKWVITKFVKEHNHSLMPGRVRRGCIYDQYPNEHDKIQELMQQLAAEKKRAA 206
Query: 119 AYREKLFNFMNNVEEQTEELSSKIQVIVDNIRKVE 153
Y+ L +E+ E LS +IQ IVDN+R +E
Sbjct: 207 TYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLE 241
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 232 (86.7 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 46/87 (52%), Positives = 59/87 (67%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGF-SPNSKGTNGPE-KKPRPSAREGCK 60
YARR+GF R+ RRSR DG + R+ C K+GF + N K T E K+PR R GCK
Sbjct: 92 YARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCK 151
Query: 61 ATILVKMEKSGKWVVTRFIKDHNHPLV 87
A++ VKM+ SGKW+V+ F+KDHNH LV
Sbjct: 152 ASLSVKMQDSGKWLVSGFVKDHNHELV 178
Score = 66 (28.3 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 98 DKDKKIXXXXXXXXXXXXXCAAYREKLFNFMNNVEEQTEELSSKIQVI 145
+ DKKI C AYR L + + +E+Q ++S K+Q I
Sbjct: 733 EMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNI 780
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 158 (60.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA+ MGF I RRS+ + + C++ G +P S+ ++G + + CKA+
Sbjct: 70 YAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESE-SSGSSSRRSTVKKTDCKAS 128
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLV 87
+ VK GKW++ F+KDHNH L+
Sbjct: 129 MHVKRRPDGKWIIHEFVKDHNHELL 153
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 155 (59.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA R GF VR Q RSRTDGT +RR C+K+GF NS R GC A
Sbjct: 47 YATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNS--------------RTGCPAF 92
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPL 86
I V+ +GKWV+ + K+HNH L
Sbjct: 93 IRVQRRDTGKWVLDQIQKEHNHDL 116
Score = 144 (55.7 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 36/84 (42%), Positives = 46/84 (54%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA +GF VRI Q RS+ DG+ +RR C+K+GF PS R GC A
Sbjct: 209 YAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQ-------------HPS-RMGCGAY 254
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPL 86
+ +K + SG W+V R KDHNH L
Sbjct: 255 MRIKRQDSGGWIVDRLNKDHNHDL 278
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 155 (59.6 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA R GF VR Q RSRTDGT +RR C+K+GF NS R GC A
Sbjct: 62 YAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNS--------------RTGCTAF 107
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPL 86
I V+ +GKWV+ + K+HNH L
Sbjct: 108 IRVQRRDTGKWVLDQIQKEHNHEL 131
Score = 141 (54.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA +GF VRI Q RS+ DG+ +RR C+++GF PS R GC A
Sbjct: 230 YAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQ-------------HPS-RMGCGAY 275
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPL 86
+ +K + SG W+V R KDHNH L
Sbjct: 276 MRIKRQDSGGWIVDRLNKDHNHDL 299
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 146 (56.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YAR +GF + I RRS+ G + ++ C++ G + K T PR + GCKA
Sbjct: 57 YARSVGFGITIKASRRSKRSGKFIDVKIACSRFG-TKREKAT---AINPRSCPKTGCKAG 112
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLVVTANGYSTVGDKDK 101
+ +K ++ KWV+ F+K+HNH + + Y +V K+K
Sbjct: 113 LHMKRKEDEKWVIYNFVKEHNHE-ICPDDFYVSVRGKNK 150
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 130 (50.8 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPN-SKGTNGPEKK-----P----- 51
Y+R MGF I RRS+T + + C++ G K N P + P
Sbjct: 89 YSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDPENMAG 148
Query: 52 -RPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 87
R A+ CKA++ VK GKWV+ F+++HNH L+
Sbjct: 149 RRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELL 185
Score = 39 (18.8 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 131 VEEQTEELSSKIQVIVDNIRKVESEMLKSFLQ 162
V E EL Q + + RK+ + M K F +
Sbjct: 177 VREHNHELLPA-QAVSEQTRKIYAAMAKQFAE 207
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 143 (55.4 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 44/170 (25%), Positives = 75/170 (44%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA+ +GF + RRSR + + C + G SK + PR S + GCKA+
Sbjct: 16 YAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYG----SKQQSDDAINPRASPKIGCKAS 71
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLVVTANGY-----ST--VGDKDKKIXXXXXXXXXXXX 115
+ VK GKW V F+K+HNH L+ Y +T V D ++
Sbjct: 72 MHVKRRPDGKWYVYSFVKEHNHDLLPEQAHYFRSHRNTELVKSNDSRLRRKKNTPLTDCK 131
Query: 116 XCAAYREKLF--NFMNNVEEQTEEL---SSKIQVIVDNIRKVESEMLKSF 160
+AY + F +M N ++ L + +++++ + +++ E K F
Sbjct: 132 HLSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFLMRMQEENPKFF 181
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 110 (43.8 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
Y+R++GF +++ R TDG+ R C S +SK K R S E C A
Sbjct: 68 YSRQLGFTSKLLPR----TDGSVSVREFVC-----SSSSK-----RSKRRLS--ESCDAM 111
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPL 86
+ ++++ KWVVT+F+K+H H L
Sbjct: 112 VRIELQGHEKWVVTKFVKEHTHGL 135
Score = 40 (19.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 117 CAAY---REKLFNFMNNVEEQTEELSSKIQVIVDNIRKVESEMLKS 159
C AY + +L+N +N E EE S ++D E L S
Sbjct: 349 CLAYPSFQVELYNCIN-FTETIEEFESSWSSVIDKYDLGRHEWLNS 393
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 114 (45.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTT--LARR-LGCNKQGFSPNSKGTNGPEKKPRPSAREGC 59
+A+R GF +R + R DG L RR C++ G +P + G ++ R S+R GC
Sbjct: 67 FAKRCGFSIR--RHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKPQRNRRSSRCGC 124
Query: 60 KATILV-KMEKSG--KWVVTRFIKDHNHPLVVTAN-----GYSTVGDKDK 101
+A + + K+ + G +W VT F HNH L+ Y ++ D DK
Sbjct: 125 QAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSISDADK 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 162 149 0.00078 104 3 11 22 0.47 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 570 (61 KB)
Total size of DFA: 130 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.51u 0.12s 16.63t Elapsed: 00:00:01
Total cpu time: 16.51u 0.12s 16.63t Elapsed: 00:00:01
Start: Mon May 20 21:26:01 2013 End: Mon May 20 21:26:02 2013