BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031272
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5
PE=2 SV=1
Length = 788
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 2 GYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGF-SPNSKGTNGPE-KKPRPSAREGC 59
YARR+GF R+ RRSR DG + R+ C K+GF + N K T E K+PR R GC
Sbjct: 91 SYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGC 150
Query: 60 KATILVKMEKSGKWVVTRFIKDHNHPLV 87
KA++ VKM+ SGKW+V+ F+KDHNH LV
Sbjct: 151 KASLSVKMQDSGKWLVSGFVKDHNHELV 178
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 100 DKKIEELTLELERQEQLCAAYREKLFNFMNNVEEQTEELSSKIQVI 145
DKKI +L ELE + C AYR L + + +E+Q ++S K+Q I
Sbjct: 735 DKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNI 780
>sp|Q3E7I5|FRS12_ARATH Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12
PE=2 SV=1
Length = 788
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 14/85 (16%)
Query: 2 GYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKA 61
YA R GF VR Q RSRTDGT +RR C+K+GF NS R GC A
Sbjct: 61 AYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNS--------------RTGCTA 106
Query: 62 TILVKMEKSGKWVVTRFIKDHNHPL 86
I V+ +GKWV+ + K+HNH L
Sbjct: 107 FIRVQRRDTGKWVLDQIQKEHNHEL 131
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 14/85 (16%)
Query: 2 GYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKA 61
YA +GF VRI Q RS+ DG+ +RR C+++GF PS R GC A
Sbjct: 229 AYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQ-------------HPS-RMGCGA 274
Query: 62 TILVKMEKSGKWVVTRFIKDHNHPL 86
+ +K + SG W+V R KDHNH L
Sbjct: 275 YMRIKRQDSGGWIVDRLNKDHNHDL 299
>sp|Q9M8J3|FRS7_ARATH Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7
PE=2 SV=1
Length = 764
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 14/84 (16%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA R GF VR Q RSRTDGT +RR C+K+GF NS R GC A
Sbjct: 47 YATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNS--------------RTGCPAF 92
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPL 86
I V+ +GKWV+ + K+HNH L
Sbjct: 93 IRVQRRDTGKWVLDQIQKEHNHDL 116
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 14/85 (16%)
Query: 2 GYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKA 61
YA +GF VRI Q RS+ DG+ +RR C+K+GF PS R GC A
Sbjct: 208 AYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQ-------------HPS-RMGCGA 253
Query: 62 TILVKMEKSGKWVVTRFIKDHNHPL 86
+ +K + SG W+V R KDHNH L
Sbjct: 254 YMRIKRQDSGGWIVDRLNKDHNHDL 278
>sp|Q6NQJ7|FRS4_ARATH Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4
PE=2 SV=2
Length = 732
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA+ +GF + RRSR + + C + G SK + PR S + GCKA+
Sbjct: 16 YAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYG----SKQQSDDAINPRASPKIGCKAS 71
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLVVTANGY 93
+ VK GKW V F+K+HNH L+ Y
Sbjct: 72 MHVKRRPDGKWYVYSFVKEHNHDLLPEQAHY 102
>sp|Q3EBQ3|FRS2_ARATH Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2
PE=2 SV=1
Length = 807
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YAR +GF + I RRS+ G + ++ C++ G +K PR + GCKA
Sbjct: 57 YARSVGFGITIKASRRSKRSGKFIDVKIACSRFG----TKREKATAINPRSCPKTGCKAG 112
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLVVTANGYSTVGDKDKKIEELTL 108
+ +K ++ KWV+ F+K+HNH + + Y +V K+K L +
Sbjct: 113 LHMKRKEDEKWVIYNFVKEHNHE-ICPDDFYVSVRGKNKPAGALAI 157
>sp|Q9SWG3|FAR1_ARATH Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1
PE=1 SV=1
Length = 827
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA+ MGF I RRS+ + + C++ G +P S+ + ++ + CKA+
Sbjct: 70 YAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSSSRR-STVKKTDCKAS 128
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLV 87
+ VK GKW++ F+KDHNH L+
Sbjct: 129 MHVKRRPDGKWIIHEFVKDHNHELL 153
>sp|Q9LIE5|FHY3_ARATH Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana
GN=FHY3 PE=1 SV=1
Length = 839
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFS-PNSKGTNGPEKKP---------- 51
Y+R MGF I RRS+T + + C++ G K N P +
Sbjct: 89 YSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDPENMAG 148
Query: 52 -RPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 87
R A+ CKA++ VK GKWV+ F+++HNH L+
Sbjct: 149 RRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELL 185
>sp|Q5UBY2|FRS1_ARATH Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1
PE=1 SV=1
Length = 687
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPN-------SKGTNGPEKKPR--- 52
YA +GF I RRSR G + + C + G + G N P+ + R
Sbjct: 40 YANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTDGFNIPQARKRGRI 99
Query: 53 --PSAREGCKATILVKMEKSGKWVVTRFIKDHNHPL 86
S++ CKA + VK + G+WVV +K+HNH +
Sbjct: 100 NRSSSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEI 135
>sp|Q9SY66|FRS11_ARATH Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11
PE=2 SV=1
Length = 680
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 19/113 (16%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTT-----LARR-LGCNKQGFSPNSKGTNGPEKKPRPSAR 56
+A+R GF +R R RT+G L RR C++ G +P + G ++ R S+R
Sbjct: 67 FAKRCGFSIR-----RHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKPQRNRRSSR 121
Query: 57 EGCKATI-LVKMEKSG--KWVVTRFIKDHNHPL-----VVTANGYSTVGDKDK 101
GC+A + + K+ + G +W VT F HNH L V Y ++ D DK
Sbjct: 122 CGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSISDADK 174
>sp|Q9SZL7|FRS9_ARATH Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9
PE=2 SV=2
Length = 545
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 31/106 (29%)
Query: 38 SPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLVVTANGYSTVG 97
+P ++ NG E P ARE AT NHP G
Sbjct: 463 TPGTRLPNG-EAYPSEEARETANAT--------------------NHP----------GG 491
Query: 98 DKDKKIEELTLELERQEQLCAAYREKLFNFMNNVEEQTEELSSKIQ 143
+K++ I ELT ELER Q C YR L + + ++EEQ +LS K+Q
Sbjct: 492 EKERTILELTAELERTGQRCEVYRANLLSILRDMEEQKFQLSLKVQ 537
>sp|Q9ZVC9|FRS3_ARATH Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3
PE=2 SV=2
Length = 851
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 16/85 (18%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
Y+R++GF +++ RTDG+ R C+ K+ + E C A
Sbjct: 68 YSRQLGFTSKLL----PRTDGSVSVREFVCSSS------------SKRSKRRLSESCDAM 111
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPLV 87
+ ++++ KWVVT+F+K+H H L
Sbjct: 112 VRIELQGHEKWVVTKFVKEHTHGLA 136
>sp|Q9S793|FRS8_ARATH Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8
PE=2 SV=2
Length = 725
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 2 GYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKA 61
YAR +GF +R+ R L CN QGF K + R R GC+A
Sbjct: 113 SYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGF----KLLKDAHSR-RKETRTGCQA 167
Query: 62 TILVKMEKSGKWVVTRFIKDHNH 84
I +++ +W V + DHNH
Sbjct: 168 MIRLRLIHFDRWKVDQVKLDHNH 190
>sp|Q9LKR4|FRS10_ARATH Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana
GN=FRS10 PE=2 SV=2
Length = 685
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
+AR+ GF +R + S+ G R C + GF+ K N + R S R GC
Sbjct: 74 FARKSGFSIRKARSTESQNLGV-YRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDGK 132
Query: 63 ILVK---MEKSGKWVVTRFIKDHNHPLV 87
+ + ++ W V++F HNH L+
Sbjct: 133 LYLTKEVVDGVSHWYVSQFSNVHNHELL 160
>sp|Q9SSQ4|FRS6_ARATH Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6
PE=2 SV=1
Length = 703
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 3 YARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKAT 62
YA +GF VR+ R L C+ QGF K N + R R GC A
Sbjct: 104 YASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGF----KRINDV-NRVRKETRTGCPAM 158
Query: 63 ILVKMEKSGKWVVTRFIKDHNHPL 86
I ++ S +W V DHNH L
Sbjct: 159 IRMRQVDSKRWRVVEVTLDHNHLL 182
>sp|Q25BW5|BGL1A_PHACH Beta-glucosidase 1A OS=Phanerochaete chrysosporium GN=BGL1A PE=1
SV=1
Length = 462
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 72 KWVVTRFIKDHNHPLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAYREKLFNFMNNV 131
+W++ K ++ P+ VT NG+ G+ D +E+ + +RQ A YR+ + V
Sbjct: 347 RWLLNYLWKAYDKPVYVTENGFPVKGENDLPVEQAVDDTDRQ----AYYRDYTEALLQAV 402
Query: 132 EEQTEELSSKI-QVIVDNIRKVE 153
E ++ ++DN E
Sbjct: 403 TEDGADVRGYFGWSLLDNFEWAE 425
>sp|A0Q0Z2|PLSX_CLONN Phosphate acyltransferase OS=Clostridium novyi (strain NT) GN=plsX
PE=3 SV=1
Length = 332
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 23 GTTL--ARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIK 80
G TL R G ++ +P G NGP A CK + LV+ K G+ +
Sbjct: 110 GATLVVGRIKGVSRPALAPIMPGKNGPFMIIDCGANAECKPSNLVQFAKMGEIYFENILN 169
Query: 81 DHNHPLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAYREKLFNFMNNVE 132
N P V G +G +++K ELT E + ++ FNF+ NVE
Sbjct: 170 VKN-PTV----GLINIGSEEEKGNELTKEAHK------LLKDMDFNFVGNVE 210
>sp|P37702|BGL38_ARATH Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 SV=1
Length = 541
Score = 32.7 bits (73), Expect = 1.0, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 73 WVVTRFIKDHNHPLV-VTANGYSTVGDKDKKIEELTLELERQEQLCA 118
+V+ F + PL+ VT NG+ST GD+D E+ T + +R + LC+
Sbjct: 402 YVMDYFKTTYGDPLIYVTENGFSTPGDED--FEKATADYKRIDYLCS 446
>sp|Q5B3B1|NDC80_EMENI Probable kinetochore protein ndc80 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=ndc80 PE=3 SV=1
Length = 738
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 110 LERQEQLCAAYREKLFNFMNNVEEQTEELSSKIQVIVDNIRKVESEM 156
L++Q ++ + K +++ NV+ + E+ S+I + D IRK ESE+
Sbjct: 370 LDKQFRILEDDKRKFEDYIQNVQGKIEKYESRIAFLEDEIRKTESEL 416
>sp|Q8AYC2|MRTFA_XENLA Myocardin-related transcription factor A OS=Xenopus laevis GN=mrtfa
PE=2 SV=1
Length = 936
Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 98 DKDKKIEELTLELERQEQLCAAYREKLFNFMNNVEEQTEELSSKIQVI--------VDNI 149
+KD++IEELT L+++++L R++L + T++ + I + VD+I
Sbjct: 507 EKDRQIEELTQRLKQKQELVERLRQQLEQEKRTPQHSTDDQQALILAVKQEPLPLTVDSI 566
Query: 150 RKVESEMLKSFL 161
K S ++K L
Sbjct: 567 NKKASSIVKQEL 578
>sp|Q49YG2|SYY_STAS1 Tyrosine--tRNA ligase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=tyrS
PE=3 SV=1
Length = 420
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 73 WVVTRFIKDHNH-PLVVTANGYSTVGDKDKKIEELTLELERQ 113
++ R ++H H PLV+ G +GD K EE TL+ E Q
Sbjct: 54 FLTLRRFQEHGHRPLVLIGGGTGMIGDPSGKSEERTLQTEAQ 95
>sp|Q62976|KCMA1_RAT Calcium-activated potassium channel subunit alpha-1 OS=Rattus
norvegicus GN=Kcnma1 PE=1 SV=3
Length = 1209
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 30 LGCNKQGFSPNSKGTNGPEKKP------RPSAREGCKATILVKMEKSGKWVVTRFIKDHN 83
L N QGF+P + P+ P +PS G I+ ++ K GK + ++ N
Sbjct: 909 LQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELAKPGKLPLVSVNQEKN 968
Query: 84 ---HPLVVT 89
H L++T
Sbjct: 969 SGTHILMIT 977
>sp|C3L0F4|PLSX_CLOB6 Phosphate acyltransferase OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 25 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 84
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 85 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 132
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|Q08460|KCMA1_MOUSE Calcium-activated potassium channel subunit alpha-1 OS=Mus musculus
GN=Kcnma1 PE=1 SV=2
Length = 1209
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 30 LGCNKQGFSPNSKGTNGPEKKP------RPSAREGCKATILVKMEKSGKWVVTRFIKDHN 83
L N QGF+P + P+ P +PS G I+ ++ K GK + ++ N
Sbjct: 908 LQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELAKPGKLPLVSVNQEKN 967
Query: 84 ---HPLVVT 89
H L++T
Sbjct: 968 SGTHILMIT 976
>sp|Q2YC67|ILVD_NITMU Dihydroxy-acid dehydratase OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=ilvD PE=3 SV=1
Length = 557
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 81 DHNHPLVVTANGYSTVGDKDKKIEELTLELERQEQLCAA 119
D + P+V ANG+ST+ +K + EL L E+ + AA
Sbjct: 32 DFDKPIVGVANGFSTITPCNKGLNELALAAEQALKQAAA 70
>sp|B1II87|PLSX_CLOBK Phosphate acyltransferase OS=Clostridium botulinum (strain Okra /
Type B1) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 25 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 84
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 85 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 132
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|C1FSM7|PLSX_CLOBJ Phosphate acyltransferase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 25 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 84
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 85 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 132
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|A7FW21|PLSX_CLOB1 Phosphate acyltransferase OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 25 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 84
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 85 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 132
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|A7GG45|PLSX_CLOBL Phosphate acyltransferase OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 25 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 84
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 85 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 132
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|P01129|CDC10_SCHPO Start control protein cdc10 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc10 PE=1 SV=1
Length = 767
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 91 NGYSTVGDKDKKIEELTLEL---ERQEQLCAAYREKLFNFMNNVEEQTEELSS 140
+ Y+ + + KK+ +L +L E Q L R++ N M ++EEQ ELS+
Sbjct: 594 SAYTQLRESTKKLSDLREQLHVSETQRTLFLELRQRCKNLMTSIEEQKSELSN 646
>sp|B1KWP6|PLSX_CLOBM Phosphate acyltransferase OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=plsX PE=3 SV=1
Length = 335
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 25 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 84
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIVDAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 85 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 132
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|Q4L774|SYY_STAHJ Tyrosine--tRNA ligase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=tyrS PE=3 SV=1
Length = 420
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 73 WVVTRFIKDHNH-PLVVTANGYSTVGDKDKKIEELTLELERQEQL----CAAYREKLFNF 127
++ R ++H H P+V+ G +GD K EE L+ E Q + +A KLF F
Sbjct: 54 FMTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERILQTEDQVEANVEGISAQMHKLFEF 113
>sp|Q18GQ9|RFCL_HALWD Replication factor C large subunit OS=Haloquadratum walsbyi (strain
DSM 16790) GN=rfcL PE=3 SV=1
Length = 516
Score = 29.6 bits (65), Expect = 7.9, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 66 KMEKSGKWVVTRFIKDHNHPLVVTANGY 93
+ ++ GK VT +KD N P+V+ AN Y
Sbjct: 117 QYDRGGKQAVTTLLKDANQPIVLIANEY 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,117,200
Number of Sequences: 539616
Number of extensions: 2412541
Number of successful extensions: 10916
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 10678
Number of HSP's gapped (non-prelim): 349
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)