Query 031284
Match_columns 162
No_of_seqs 142 out of 1032
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 19:05:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 99.7 1.3E-16 4.3E-21 132.7 14.1 146 2-160 155-303 (425)
2 4dgk_A Phytoene dehydrogenase; 99.6 1.8E-15 6.3E-20 128.5 10.3 114 38-160 213-330 (501)
3 3nrn_A Uncharacterized protein 99.6 1.6E-14 5.5E-19 120.5 14.0 144 2-160 148-291 (421)
4 3nks_A Protoporphyrinogen oxid 99.5 4.2E-13 1.4E-17 113.1 13.1 139 1-151 162-327 (477)
5 2ivd_A PPO, PPOX, protoporphyr 99.3 1.9E-11 6.4E-16 103.1 12.7 137 1-149 167-329 (478)
6 1s3e_A Amine oxidase [flavin-c 99.3 1.4E-11 4.6E-16 105.6 10.7 136 2-150 165-306 (520)
7 3i6d_A Protoporphyrinogen oxid 99.2 2.5E-11 8.6E-16 101.5 8.7 134 1-150 168-323 (470)
8 2vvm_A Monoamine oxidase N; FA 99.2 5.3E-11 1.8E-15 101.0 9.7 139 1-149 206-349 (495)
9 3lov_A Protoporphyrinogen oxid 99.2 2.4E-11 8.2E-16 102.5 7.5 131 1-149 166-321 (475)
10 3p1w_A Rabgdi protein; GDI RAB 99.1 1.3E-10 4.4E-15 99.9 8.1 91 13-111 220-313 (475)
11 2yg5_A Putrescine oxidase; oxi 99.1 2E-10 6.7E-15 96.2 7.6 135 2-149 165-305 (453)
12 4gde_A UDP-galactopyranose mut 99.1 1E-10 3.6E-15 99.0 5.8 134 1-150 161-310 (513)
13 1sez_A Protoporphyrinogen oxid 99.1 1.5E-10 5.3E-15 98.2 6.8 139 1-149 168-345 (504)
14 4dsg_A UDP-galactopyranose mut 99.0 1.1E-09 3.7E-14 93.7 10.2 136 1-150 155-310 (484)
15 2jae_A L-amino acid oxidase; o 98.9 2.8E-09 9.5E-14 90.2 7.3 100 36-149 229-331 (489)
16 1b37_A Protein (polyamine oxid 98.8 2.7E-09 9.3E-14 90.2 5.8 99 42-150 202-310 (472)
17 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 9.3E-08 3.2E-12 77.3 11.5 90 47-148 112-203 (342)
18 1vg0_A RAB proteins geranylger 98.7 1.6E-07 5.6E-12 83.4 12.1 85 17-108 346-433 (650)
19 1d5t_A Guanine nucleotide diss 98.5 2.1E-07 7.2E-12 78.3 8.2 90 13-112 198-290 (433)
20 2iid_A L-amino-acid oxidase; f 98.5 5.1E-07 1.8E-11 76.4 10.1 98 37-149 232-335 (498)
21 3k7m_X 6-hydroxy-L-nicotine ox 98.5 1.2E-06 4E-11 72.6 11.4 131 3-150 161-297 (431)
22 1rsg_A FMS1 protein; FAD bindi 98.5 3.5E-07 1.2E-11 78.2 7.8 97 40-150 197-306 (516)
23 2bcg_G Secretory pathway GDP d 98.4 7.3E-07 2.5E-11 75.3 9.4 67 35-111 231-299 (453)
24 2b9w_A Putative aminooxidase; 98.4 3.8E-07 1.3E-11 75.5 5.3 95 10-119 169-265 (424)
25 2z3y_A Lysine-specific histone 98.2 4.8E-06 1.6E-10 73.7 9.1 99 39-151 394-501 (662)
26 2xag_A Lysine-specific histone 98.1 8E-06 2.7E-10 74.6 8.8 103 38-152 564-673 (852)
27 1yvv_A Amine oxidase, flavin-c 98.0 6.4E-05 2.2E-09 59.7 10.8 87 51-150 110-197 (336)
28 4gut_A Lysine-specific histone 98.0 1.7E-05 5.7E-10 71.8 8.1 80 60-150 542-625 (776)
29 1i8t_A UDP-galactopyranose mut 98.0 1.2E-07 4.2E-12 78.2 -5.7 111 1-149 147-260 (367)
30 3dje_A Fructosyl amine: oxygen 97.8 5.5E-05 1.9E-09 62.8 7.7 58 47-112 161-221 (438)
31 3hdq_A UDP-galactopyranose mut 97.8 1.7E-06 5.8E-11 72.6 -1.8 110 1-148 175-287 (397)
32 2bi7_A UDP-galactopyranose mut 97.8 2.1E-06 7.1E-11 71.2 -1.5 88 1-116 151-242 (384)
33 1v0j_A UDP-galactopyranose mut 97.7 3.9E-07 1.3E-11 75.8 -6.7 113 1-148 157-273 (399)
34 3lxd_A FAD-dependent pyridine 97.7 0.00011 3.9E-09 60.8 7.6 58 45-110 192-249 (415)
35 3fg2_P Putative rubredoxin red 97.6 0.00012 3.9E-09 60.6 7.4 58 45-110 182-239 (404)
36 3ayj_A Pro-enzyme of L-phenyla 97.5 0.00027 9.3E-09 63.4 8.1 76 35-114 336-416 (721)
37 3dme_A Conserved exported prot 97.4 0.00028 9.6E-09 56.3 6.7 58 47-112 150-209 (369)
38 1y56_B Sarcosine oxidase; dehy 97.4 0.00045 1.5E-08 55.9 7.5 57 47-112 149-205 (382)
39 4at0_A 3-ketosteroid-delta4-5a 97.4 0.00042 1.4E-08 59.2 7.6 59 48-110 203-262 (510)
40 2i0z_A NAD(FAD)-utilizing dehy 97.4 0.00047 1.6E-08 57.8 7.7 64 40-111 127-190 (447)
41 3nyc_A D-arginine dehydrogenas 97.4 0.00029 1E-08 56.7 6.1 56 47-112 154-209 (381)
42 3nlc_A Uncharacterized protein 97.3 0.00055 1.9E-08 59.6 7.4 57 47-111 220-276 (549)
43 3cgv_A Geranylgeranyl reductas 97.2 0.00072 2.4E-08 54.7 6.9 64 48-116 103-167 (397)
44 3ef6_A Toluene 1,2-dioxygenase 97.2 0.00056 1.9E-08 56.7 6.1 55 47-110 185-239 (410)
45 2gag_B Heterotetrameric sarcos 97.1 0.00081 2.8E-08 54.6 6.6 56 48-112 175-230 (405)
46 3iwa_A FAD-dependent pyridine 97.1 0.0018 6.2E-08 54.4 8.5 58 44-110 199-256 (472)
47 3axb_A Putative oxidoreductase 97.1 0.00087 3E-08 55.7 6.3 56 48-112 182-254 (448)
48 1q1r_A Putidaredoxin reductase 97.0 0.0015 5E-08 54.6 7.4 58 45-110 189-248 (431)
49 3da1_A Glycerol-3-phosphate de 97.0 0.0017 5.8E-08 56.3 8.0 66 47-117 170-239 (561)
50 3ps9_A TRNA 5-methylaminomethy 97.0 0.0012 4.3E-08 58.1 7.1 57 47-112 417-473 (676)
51 1trb_A Thioredoxin reductase; 97.0 0.0025 8.5E-08 50.0 8.2 60 47-111 184-246 (320)
52 1y0p_A Fumarate reductase flav 97.0 0.0022 7.7E-08 55.4 8.3 59 47-110 255-315 (571)
53 1pj5_A N,N-dimethylglycine oxi 96.9 0.0018 6E-08 58.5 7.4 56 48-112 152-207 (830)
54 1d4d_A Flavocytochrome C fumar 96.9 0.0027 9.4E-08 55.0 8.1 59 47-110 255-315 (572)
55 1ryi_A Glycine oxidase; flavop 96.9 0.0013 4.5E-08 53.0 5.6 55 47-111 164-218 (382)
56 2rgh_A Alpha-glycerophosphate 96.9 0.0031 1.1E-07 54.8 8.2 61 47-112 188-250 (571)
57 1mo9_A ORF3; nucleotide bindin 96.8 0.0027 9.4E-08 54.3 7.5 60 46-110 254-314 (523)
58 1qo8_A Flavocytochrome C3 fuma 96.8 0.003 1E-07 54.5 7.9 59 47-110 250-310 (566)
59 3pvc_A TRNA 5-methylaminomethy 96.8 0.002 7E-08 57.0 6.8 57 47-112 412-469 (689)
60 2cdu_A NADPH oxidase; flavoenz 96.8 0.0018 6.3E-08 54.1 5.9 58 45-111 189-246 (452)
61 2wpf_A Trypanothione reductase 96.8 0.0026 9E-08 54.1 7.0 59 45-111 233-291 (495)
62 3atr_A Conserved archaeal prot 96.7 0.0061 2.1E-07 50.9 8.8 66 48-118 101-169 (453)
63 3oc4_A Oxidoreductase, pyridin 96.7 0.0029 1E-07 52.9 6.8 57 45-111 187-243 (452)
64 2uzz_A N-methyl-L-tryptophan o 96.7 0.0032 1.1E-07 50.5 6.8 55 48-112 150-204 (372)
65 1m6i_A Programmed cell death p 96.7 0.0031 1.1E-07 53.6 7.0 57 45-110 224-280 (493)
66 2hqm_A GR, grase, glutathione 96.7 0.003 1E-07 53.4 6.8 59 45-110 224-283 (479)
67 1fec_A Trypanothione reductase 96.7 0.003 1E-07 53.6 6.8 59 45-111 229-287 (490)
68 3o0h_A Glutathione reductase; 96.7 0.0033 1.1E-07 53.1 7.0 57 46-111 231-287 (484)
69 2v3a_A Rubredoxin reductase; a 96.7 0.0035 1.2E-07 51.2 6.9 56 46-110 186-241 (384)
70 2cul_A Glucose-inhibited divis 96.7 0.0035 1.2E-07 47.8 6.4 55 48-111 69-124 (232)
71 3itj_A Thioredoxin reductase 1 96.6 0.0062 2.1E-07 47.9 7.7 57 50-111 211-270 (338)
72 4dna_A Probable glutathione re 96.6 0.0032 1.1E-07 52.8 6.3 58 45-111 209-267 (463)
73 1xdi_A RV3303C-LPDA; reductase 96.6 0.0051 1.8E-07 52.1 7.4 58 45-111 221-278 (499)
74 2gf3_A MSOX, monomeric sarcosi 96.5 0.0053 1.8E-07 49.5 6.8 56 47-112 150-205 (389)
75 2qcu_A Aerobic glycerol-3-phos 96.5 0.0066 2.3E-07 51.6 7.7 60 47-112 149-210 (501)
76 2wdq_A Succinate dehydrogenase 96.5 0.0075 2.6E-07 52.6 8.2 61 47-111 143-205 (588)
77 3nix_A Flavoprotein/dehydrogen 96.5 0.006 2.1E-07 49.8 6.9 64 48-118 107-173 (421)
78 3e1t_A Halogenase; flavoprotei 96.5 0.0072 2.5E-07 51.4 7.6 64 48-117 112-178 (512)
79 2oln_A NIKD protein; flavoprot 96.5 0.0056 1.9E-07 49.7 6.7 54 48-111 154-207 (397)
80 1ges_A Glutathione reductase; 96.5 0.0056 1.9E-07 51.2 6.7 58 45-110 206-263 (450)
81 2weu_A Tryptophan 5-halogenase 96.5 0.008 2.7E-07 50.8 7.7 58 47-112 173-230 (511)
82 2e4g_A Tryptophan halogenase; 96.5 0.0065 2.2E-07 52.2 7.2 57 48-112 195-252 (550)
83 2x3n_A Probable FAD-dependent 96.4 0.0055 1.9E-07 49.9 6.2 63 48-118 108-173 (399)
84 2bs2_A Quinol-fumarate reducta 96.4 0.012 4.1E-07 52.2 8.5 59 48-111 159-219 (660)
85 3cty_A Thioredoxin reductase; 96.4 0.014 4.9E-07 45.8 8.2 57 50-111 193-251 (319)
86 3r9u_A Thioredoxin reductase; 96.3 0.011 3.8E-07 45.9 7.4 55 51-111 187-243 (315)
87 2gmh_A Electron transfer flavo 96.3 0.011 3.7E-07 51.5 7.9 60 48-111 145-216 (584)
88 1onf_A GR, grase, glutathione 96.3 0.0083 2.8E-07 51.0 7.0 59 45-111 215-274 (500)
89 3v76_A Flavoprotein; structura 96.3 0.0061 2.1E-07 50.9 5.9 56 46-111 131-186 (417)
90 2yqu_A 2-oxoglutarate dehydrog 96.3 0.0087 3E-07 50.0 6.9 57 46-111 207-263 (455)
91 2r9z_A Glutathione amide reduc 96.2 0.012 4.1E-07 49.4 7.4 57 45-110 205-262 (463)
92 2ywl_A Thioredoxin reductase r 96.2 0.01 3.4E-07 43.0 5.9 54 47-111 56-109 (180)
93 2zbw_A Thioredoxin reductase; 96.1 0.025 8.5E-07 44.6 8.6 58 48-111 192-251 (335)
94 2gqw_A Ferredoxin reductase; f 96.1 0.012 4.2E-07 48.6 7.0 53 45-110 185-237 (408)
95 1zmd_A Dihydrolipoyl dehydroge 96.1 0.02 6.9E-07 48.0 8.4 62 45-111 218-281 (474)
96 3ics_A Coenzyme A-disulfide re 96.1 0.012 4E-07 50.9 7.0 55 45-110 226-280 (588)
97 2h88_A Succinate dehydrogenase 96.1 0.013 4.6E-07 51.5 7.5 59 48-111 156-216 (621)
98 4g6h_A Rotenone-insensitive NA 96.1 0.011 3.6E-07 50.6 6.6 58 44-110 269-330 (502)
99 2bc0_A NADH oxidase; flavoprot 96.1 0.01 3.6E-07 50.1 6.4 56 45-110 234-289 (490)
100 3lad_A Dihydrolipoamide dehydr 96.1 0.021 7.1E-07 47.9 8.2 60 45-111 219-279 (476)
101 1zk7_A HGII, reductase, mercur 96.1 0.014 4.8E-07 48.9 7.1 56 46-111 215-270 (467)
102 3h8l_A NADH oxidase; membrane 96.0 0.0088 3E-07 49.0 5.5 52 46-110 217-268 (409)
103 1y56_A Hypothetical protein PH 96.0 0.016 5.4E-07 49.2 7.2 63 35-111 250-312 (493)
104 1ebd_A E3BD, dihydrolipoamide 96.0 0.02 6.9E-07 47.7 7.7 61 45-111 209-269 (455)
105 3cgb_A Pyridine nucleotide-dis 96.0 0.02 7E-07 48.2 7.7 56 46-111 226-281 (480)
106 3ab1_A Ferredoxin--NADP reduct 96.0 0.018 6.1E-07 46.1 7.0 58 48-111 203-262 (360)
107 2aqj_A Tryptophan halogenase, 96.0 0.017 5.9E-07 49.3 7.3 58 47-112 165-222 (538)
108 1ojt_A Surface protein; redox- 95.9 0.011 3.9E-07 49.8 6.0 61 45-111 224-285 (482)
109 1fl2_A Alkyl hydroperoxide red 95.9 0.038 1.3E-06 43.0 8.4 55 51-110 183-240 (310)
110 2gqf_A Hypothetical protein HI 95.9 0.021 7.2E-07 47.3 7.2 58 45-112 107-168 (401)
111 1v59_A Dihydrolipoamide dehydr 95.8 0.026 9E-07 47.3 7.8 61 45-111 222-286 (478)
112 1nhp_A NADH peroxidase; oxidor 95.8 0.016 5.3E-07 48.3 6.4 57 45-111 189-245 (447)
113 2a8x_A Dihydrolipoyl dehydroge 95.8 0.027 9.1E-07 47.1 7.8 61 45-111 210-270 (464)
114 1kf6_A Fumarate reductase flav 95.8 0.024 8.4E-07 49.5 7.8 59 48-111 135-196 (602)
115 3c4n_A Uncharacterized protein 95.8 0.0043 1.5E-07 51.1 2.8 54 48-111 173-235 (405)
116 1n4w_A CHOD, cholesterol oxida 95.7 0.021 7.1E-07 48.6 6.8 59 50-112 224-288 (504)
117 1k0i_A P-hydroxybenzoate hydro 95.7 0.03 1E-06 45.4 7.4 64 48-119 104-171 (394)
118 1rp0_A ARA6, thiazole biosynth 95.7 0.035 1.2E-06 43.5 7.5 58 48-110 120-189 (284)
119 2pyx_A Tryptophan halogenase; 95.7 0.032 1.1E-06 47.5 7.8 63 48-118 176-241 (526)
120 3dk9_A Grase, GR, glutathione 95.6 0.042 1.4E-06 46.1 8.2 63 45-111 226-292 (478)
121 3dgh_A TRXR-1, thioredoxin red 95.6 0.025 8.5E-07 47.6 6.8 60 46-110 226-287 (483)
122 1dxl_A Dihydrolipoamide dehydr 95.6 0.035 1.2E-06 46.3 7.7 61 45-111 216-278 (470)
123 3lzw_A Ferredoxin--NADP reduct 95.6 0.03 1E-06 43.7 6.7 55 51-111 193-249 (332)
124 3i3l_A Alkylhalidase CMLS; fla 95.6 0.026 8.8E-07 49.3 6.9 62 47-115 128-192 (591)
125 3f8d_A Thioredoxin reductase ( 95.5 0.045 1.5E-06 42.4 7.4 53 52-110 194-249 (323)
126 3urh_A Dihydrolipoyl dehydroge 95.5 0.054 1.9E-06 45.6 8.4 61 45-111 237-299 (491)
127 2q0l_A TRXR, thioredoxin reduc 95.4 0.075 2.6E-06 41.3 8.4 57 50-111 181-240 (311)
128 3ntd_A FAD-dependent pyridine 95.4 0.042 1.4E-06 46.9 7.4 57 46-110 191-265 (565)
129 2zxi_A TRNA uridine 5-carboxym 95.4 0.032 1.1E-06 49.5 6.8 55 48-111 124-179 (637)
130 4a9w_A Monooxygenase; baeyer-v 95.4 0.021 7.3E-07 44.9 5.2 56 47-111 76-131 (357)
131 4eqs_A Coenzyme A disulfide re 95.3 0.039 1.3E-06 46.1 7.0 53 45-110 186-238 (437)
132 3oz2_A Digeranylgeranylglycero 95.3 0.039 1.3E-06 43.9 6.7 64 48-116 103-167 (397)
133 2q7v_A Thioredoxin reductase; 95.3 0.08 2.7E-06 41.5 8.3 55 50-110 190-247 (325)
134 2eq6_A Pyruvate dehydrogenase 95.2 0.069 2.4E-06 44.7 8.1 59 46-110 209-269 (464)
135 3k30_A Histamine dehydrogenase 95.2 0.017 5.7E-07 51.1 4.5 55 48-110 568-622 (690)
136 2qae_A Lipoamide, dihydrolipoy 95.2 0.06 2.1E-06 45.0 7.7 60 45-111 213-275 (468)
137 1coy_A Cholesterol oxidase; ox 95.1 0.042 1.4E-06 46.8 6.7 57 51-111 230-292 (507)
138 3dgz_A Thioredoxin reductase 2 95.1 0.079 2.7E-06 44.6 8.3 62 45-111 223-286 (488)
139 3h28_A Sulfide-quinone reducta 95.1 0.036 1.2E-06 45.8 5.9 51 49-109 202-253 (430)
140 3alj_A 2-methyl-3-hydroxypyrid 95.0 0.048 1.7E-06 44.0 6.4 58 48-117 108-166 (379)
141 3ces_A MNMG, tRNA uridine 5-ca 95.0 0.038 1.3E-06 49.0 6.1 55 48-111 125-180 (651)
142 2qa2_A CABE, polyketide oxygen 94.9 0.086 3E-06 44.8 8.0 62 48-118 108-173 (499)
143 2qa1_A PGAE, polyketide oxygen 94.8 0.085 2.9E-06 44.8 7.8 64 48-118 107-172 (500)
144 3ihg_A RDME; flavoenzyme, anth 94.8 0.078 2.7E-06 45.1 7.4 66 47-117 120-189 (535)
145 1vdc_A NTR, NADPH dependent th 94.7 0.14 4.9E-06 40.0 8.4 59 50-111 197-258 (333)
146 1xhc_A NADH oxidase /nitrite r 94.6 0.036 1.2E-06 45.1 4.8 52 45-110 181-232 (367)
147 3hyw_A Sulfide-quinone reducta 94.5 0.066 2.3E-06 44.4 6.2 54 47-110 200-254 (430)
148 1chu_A Protein (L-aspartate ox 94.5 0.073 2.5E-06 45.8 6.6 61 48-111 139-207 (540)
149 1kdg_A CDH, cellobiose dehydro 94.4 0.05 1.7E-06 46.6 5.3 55 53-112 201-261 (546)
150 2a87_A TRXR, TR, thioredoxin r 94.3 0.078 2.7E-06 41.9 6.0 55 51-111 194-251 (335)
151 1jnr_A Adenylylsulfate reducta 94.2 0.16 5.6E-06 44.5 8.2 62 48-111 152-217 (643)
152 2e5v_A L-aspartate oxidase; ar 94.1 0.089 3E-06 44.4 6.1 57 47-111 119-175 (472)
153 4b1b_A TRXR, thioredoxin reduc 94.0 0.13 4.4E-06 44.5 7.2 57 45-110 261-317 (542)
154 3fbs_A Oxidoreductase; structu 94.0 0.094 3.2E-06 40.1 5.7 60 37-110 165-224 (297)
155 2jbv_A Choline oxidase; alcoho 93.9 0.066 2.3E-06 46.1 5.2 49 59-111 221-272 (546)
156 1fl2_A Alkyl hydroperoxide red 93.8 0.11 3.9E-06 40.2 6.0 58 48-111 57-114 (310)
157 3lzw_A Ferredoxin--NADP reduct 93.8 0.095 3.3E-06 40.8 5.6 55 47-110 67-121 (332)
158 1lvl_A Dihydrolipoamide dehydr 93.8 0.09 3.1E-06 43.9 5.6 55 46-111 211-267 (458)
159 3gwf_A Cyclohexanone monooxyge 93.8 0.099 3.4E-06 45.0 6.0 56 48-110 88-145 (540)
160 3vrd_B FCCB subunit, flavocyto 93.7 0.015 5.2E-07 47.4 0.8 46 56-110 211-256 (401)
161 4ap3_A Steroid monooxygenase; 93.7 0.1 3.5E-06 45.0 6.0 56 48-110 100-157 (549)
162 3fmw_A Oxygenase; mithramycin, 93.7 0.066 2.3E-06 46.4 4.7 64 48-118 149-214 (570)
163 3ab1_A Ferredoxin--NADP reduct 93.6 0.14 4.8E-06 40.8 6.3 57 47-111 74-130 (360)
164 3klj_A NAD(FAD)-dependent dehy 93.6 0.076 2.6E-06 43.6 4.7 52 48-110 63-114 (385)
165 3cp8_A TRNA uridine 5-carboxym 93.6 0.11 3.7E-06 46.1 5.9 55 48-111 118-173 (641)
166 3gyx_A Adenylylsulfate reducta 93.5 0.15 5.2E-06 45.1 6.9 61 48-110 167-231 (662)
167 2bry_A NEDD9 interacting prote 93.5 0.094 3.2E-06 44.5 5.3 63 47-112 166-230 (497)
168 4fk1_A Putative thioredoxin re 93.5 0.31 1.1E-05 38.0 8.0 53 48-109 181-233 (304)
169 1hyu_A AHPF, alkyl hydroperoxi 93.5 0.27 9.1E-06 41.9 8.1 55 51-110 394-451 (521)
170 3s5w_A L-ornithine 5-monooxyge 93.4 0.32 1.1E-05 40.2 8.3 46 60-111 329-376 (463)
171 3pl8_A Pyranose 2-oxidase; sub 93.4 0.076 2.6E-06 46.6 4.6 86 60-148 273-371 (623)
172 3kd9_A Coenzyme A disulfide re 93.3 0.12 4.1E-06 42.9 5.6 55 45-110 188-242 (449)
173 3d1c_A Flavin-containing putat 93.3 0.12 4.1E-06 41.1 5.4 54 48-110 215-270 (369)
174 2zbw_A Thioredoxin reductase; 93.3 0.18 6E-06 39.6 6.3 56 47-111 65-120 (335)
175 3d1c_A Flavin-containing putat 93.3 0.19 6.6E-06 39.8 6.6 54 48-111 89-142 (369)
176 3rp8_A Flavoprotein monooxygen 93.2 0.12 4.2E-06 42.0 5.4 58 48-116 128-186 (407)
177 2e1m_B L-glutamate oxidase; L- 93.0 0.1 3.5E-06 36.9 4.1 56 96-151 3-58 (130)
178 3sx6_A Sulfide-quinone reducta 93.0 0.19 6.4E-06 41.6 6.3 51 49-109 210-266 (437)
179 2vou_A 2,6-dihydroxypyridine h 92.9 0.2 6.8E-06 40.7 6.2 55 52-115 100-157 (397)
180 2dkh_A 3-hydroxybenzoate hydro 92.6 0.28 9.5E-06 42.9 7.0 69 48-118 142-218 (639)
181 2xve_A Flavin-containing monoo 92.5 0.34 1.2E-05 40.6 7.3 61 47-111 101-165 (464)
182 3qfa_A Thioredoxin reductase 1 92.5 0.55 1.9E-05 39.9 8.6 63 45-111 248-314 (519)
183 3uox_A Otemo; baeyer-villiger 92.4 0.18 6.2E-06 43.4 5.5 57 47-110 87-145 (545)
184 3qvp_A Glucose oxidase; oxidor 92.3 0.15 5E-06 44.6 4.9 52 58-111 238-292 (583)
185 3f8d_A Thioredoxin reductase ( 92.2 0.23 7.8E-06 38.3 5.5 55 47-111 70-124 (323)
186 3ic9_A Dihydrolipoamide dehydr 92.2 0.42 1.4E-05 40.3 7.5 58 46-111 214-273 (492)
187 1ps9_A 2,4-dienoyl-COA reducta 91.9 0.45 1.5E-05 41.8 7.6 53 47-111 573-627 (671)
188 2gag_A Heterotetrameric sarcos 91.9 0.32 1.1E-05 44.7 6.8 53 54-110 323-381 (965)
189 1hyu_A AHPF, alkyl hydroperoxi 91.6 0.33 1.1E-05 41.3 6.2 58 48-111 268-325 (521)
190 2q0l_A TRXR, thioredoxin reduc 91.6 0.36 1.2E-05 37.3 6.0 54 47-110 59-112 (311)
191 2gv8_A Monooxygenase; FMO, FAD 91.3 0.34 1.2E-05 40.1 5.9 59 48-112 116-177 (447)
192 1w4x_A Phenylacetone monooxyge 91.0 0.37 1.3E-05 41.1 6.0 56 49-111 96-153 (542)
193 1lqt_A FPRA; NADP+ derivative, 90.7 0.28 9.6E-06 41.2 4.9 56 50-111 249-325 (456)
194 3itj_A Thioredoxin reductase 1 90.7 0.41 1.4E-05 37.2 5.5 58 47-111 84-141 (338)
195 1ju2_A HydroxynitrIle lyase; f 90.6 0.35 1.2E-05 41.4 5.5 58 55-115 202-264 (536)
196 2vdc_G Glutamate synthase [NAD 90.6 0.19 6.3E-06 42.4 3.7 51 54-110 309-376 (456)
197 3s5w_A L-ornithine 5-monooxyge 90.3 0.5 1.7E-05 39.0 6.0 58 47-110 127-190 (463)
198 3c96_A Flavin-containing monoo 90.2 0.64 2.2E-05 37.8 6.5 62 48-116 108-174 (410)
199 1gte_A Dihydropyrimidine dehyd 90.1 0.78 2.7E-05 42.5 7.7 54 52-110 375-440 (1025)
200 1cjc_A Protein (adrenodoxin re 90.1 0.58 2E-05 39.2 6.3 49 60-111 270-332 (460)
201 2xdo_A TETX2 protein; tetracyc 90.0 0.29 9.8E-06 39.7 4.2 48 61-117 140-188 (398)
202 3q9t_A Choline dehydrogenase a 89.9 0.38 1.3E-05 41.9 5.1 50 58-111 217-269 (577)
203 2q7v_A Thioredoxin reductase; 89.8 0.82 2.8E-05 35.6 6.7 56 47-111 65-122 (325)
204 3fim_B ARYL-alcohol oxidase; A 89.3 0.33 1.1E-05 42.2 4.2 52 57-112 218-276 (566)
205 2x8g_A Thioredoxin glutathione 89.2 1.1 3.6E-05 38.6 7.4 63 45-111 324-394 (598)
206 3jsk_A Cypbp37 protein; octame 89.1 1.3 4.3E-05 36.2 7.4 62 48-111 161-250 (344)
207 3t37_A Probable dehydrogenase; 89.1 0.46 1.6E-05 39.9 4.9 53 59-116 223-275 (526)
208 1gpe_A Protein (glucose oxidas 89.0 0.39 1.3E-05 41.7 4.4 51 58-111 242-296 (587)
209 1q1r_A Putidaredoxin reductase 88.3 0.91 3.1E-05 37.5 6.1 46 54-110 67-112 (431)
210 1trb_A Thioredoxin reductase; 88.3 0.92 3.2E-05 35.0 5.9 53 47-110 62-114 (320)
211 2gjc_A Thiazole biosynthetic e 88.1 2.1 7.1E-05 34.6 8.0 64 48-111 147-238 (326)
212 4hb9_A Similarities with proba 88.1 0.57 2E-05 37.3 4.7 55 53-115 114-170 (412)
213 1vdc_A NTR, NADPH dependent th 87.8 0.79 2.7E-05 35.7 5.2 54 47-111 70-123 (333)
214 2a87_A TRXR, TR, thioredoxin r 87.0 0.92 3.2E-05 35.6 5.2 54 47-111 71-125 (335)
215 1xhc_A NADH oxidase /nitrite r 86.9 0.71 2.4E-05 37.3 4.6 48 51-110 64-111 (367)
216 1o94_A Tmadh, trimethylamine d 86.8 0.58 2E-05 41.6 4.3 26 50-75 574-599 (729)
217 3uox_A Otemo; baeyer-villiger 86.1 0.6 2.1E-05 40.1 3.9 48 51-112 342-391 (545)
218 3ef6_A Toluene 1,2-dioxygenase 86.1 1.2 4.1E-05 36.4 5.6 47 54-111 64-110 (410)
219 3hyw_A Sulfide-quinone reducta 85.8 0.3 1E-05 40.4 1.8 52 48-111 57-108 (430)
220 3fbs_A Oxidoreductase; structu 85.6 1.4 4.6E-05 33.4 5.4 55 47-111 56-111 (297)
221 3l8k_A Dihydrolipoyl dehydroge 85.4 1.5 5E-05 36.5 5.9 56 47-111 214-271 (466)
222 4eqs_A Coenzyme A disulfide re 83.7 1.8 6E-05 35.9 5.6 53 53-111 63-115 (437)
223 3cty_A Thioredoxin reductase; 83.5 2.4 8E-05 32.8 6.0 53 48-111 73-125 (319)
224 3gwf_A Cyclohexanone monooxyge 83.3 0.72 2.5E-05 39.6 3.1 43 57-112 340-384 (540)
225 3h8l_A NADH oxidase; membrane 83.2 1 3.6E-05 36.5 4.0 52 47-110 56-111 (409)
226 3oc4_A Oxidoreductase, pyridin 83.0 2.9 0.0001 34.4 6.7 50 53-110 64-113 (452)
227 4a5l_A Thioredoxin reductase; 82.8 14 0.00047 28.1 10.3 57 50-111 191-249 (314)
228 3lxd_A FAD-dependent pyridine 82.7 1.9 6.4E-05 35.1 5.3 51 49-110 67-117 (415)
229 2r0c_A REBC; flavin adenine di 82.7 2.6 8.8E-05 36.0 6.4 60 49-117 140-202 (549)
230 2cdu_A NADPH oxidase; flavoenz 81.5 1.8 6.2E-05 35.7 4.9 54 49-110 60-115 (452)
231 3sx6_A Sulfide-quinone reducta 81.2 2.3 8E-05 34.9 5.4 51 49-111 61-111 (437)
232 3ics_A Coenzyme A-disulfide re 80.4 2.3 8E-05 36.3 5.3 54 49-110 95-150 (588)
233 2bc0_A NADH oxidase; flavoprot 80.2 4.1 0.00014 34.0 6.7 52 51-110 96-147 (490)
234 2gqw_A Ferredoxin reductase; f 80.1 1.9 6.6E-05 35.1 4.5 44 56-110 68-111 (408)
235 2e1m_A L-glutamate oxidase; L- 80.0 2.5 8.7E-05 34.7 5.2 37 37-78 312-348 (376)
236 3ntd_A FAD-dependent pyridine 79.4 2.6 8.8E-05 35.7 5.2 54 49-110 60-115 (565)
237 1nhp_A NADH peroxidase; oxidor 78.1 2.7 9.2E-05 34.6 4.8 54 49-110 58-113 (447)
238 3fg2_P Putative rubredoxin red 77.0 5 0.00017 32.4 6.1 51 48-110 58-108 (404)
239 4ap3_A Steroid monooxygenase; 76.1 1.9 6.6E-05 36.9 3.5 44 55-112 351-396 (549)
240 4fk1_A Putative thioredoxin re 76.1 4.8 0.00016 31.0 5.5 55 48-110 61-115 (304)
241 2v3a_A Rubredoxin reductase; a 75.0 6.2 0.00021 31.6 6.1 46 53-110 66-111 (384)
242 3kd9_A Coenzyme A disulfide re 74.7 3.1 0.0001 34.2 4.3 44 56-110 68-112 (449)
243 1m6i_A Programmed cell death p 73.4 2.7 9.2E-05 35.3 3.7 41 59-110 102-142 (493)
244 3cgb_A Pyridine nucleotide-dis 72.0 5.1 0.00017 33.3 5.0 49 54-110 99-150 (480)
245 1ebd_A E3BD, dihydrolipoamide 71.4 8.1 0.00028 31.7 6.1 50 49-110 93-143 (455)
246 1pn0_A Phenol 2-monooxygenase; 71.3 7.3 0.00025 34.1 6.1 29 49-77 121-152 (665)
247 3r9u_A Thioredoxin reductase; 70.8 6.9 0.00023 29.7 5.2 55 47-110 62-116 (315)
248 3vrd_B FCCB subunit, flavocyto 70.6 8.9 0.00031 30.6 6.1 44 56-111 64-107 (401)
249 3iwa_A FAD-dependent pyridine 70.2 5.5 0.00019 32.9 4.8 50 53-110 72-123 (472)
250 3h28_A Sulfide-quinone reducta 70.1 1.8 6.1E-05 35.5 1.8 52 48-111 57-108 (430)
251 4b63_A L-ornithine N5 monooxyg 69.3 9.1 0.00031 32.2 6.1 64 47-110 145-212 (501)
252 3g3e_A D-amino-acid oxidase; F 67.9 1.1 3.8E-05 35.4 0.0 44 48-112 143-186 (351)
253 2a8x_A Dihydrolipoyl dehydroge 65.3 9.9 0.00034 31.2 5.4 50 50-111 94-145 (464)
254 1dxl_A Dihydrolipoamide dehydr 63.0 11 0.00037 31.0 5.3 50 50-111 99-150 (470)
255 1y56_A Hypothetical protein PH 62.3 8.3 0.00029 32.2 4.5 44 59-110 172-217 (493)
256 4a5l_A Thioredoxin reductase; 62.0 10 0.00034 28.9 4.6 54 47-110 66-119 (314)
257 1w4x_A Phenylacetone monooxyge 59.1 6.7 0.00023 33.2 3.3 46 53-112 344-391 (542)
258 1ojt_A Surface protein; redox- 57.9 15 0.00053 30.3 5.4 48 52-111 100-159 (482)
259 4a9w_A Monooxygenase; baeyer-v 57.9 6.6 0.00023 30.2 2.9 39 59-111 246-284 (357)
260 1v59_A Dihydrolipoamide dehydr 57.4 11 0.00037 31.1 4.3 49 51-111 100-156 (478)
261 2qae_A Lipoamide, dihydrolipoy 53.7 18 0.00062 29.7 5.1 49 50-110 96-146 (468)
262 2gv8_A Monooxygenase; FMO, FAD 49.9 26 0.00088 28.5 5.4 63 35-111 212-291 (447)
263 1xdi_A RV3303C-LPDA; reductase 47.3 27 0.00091 29.0 5.1 55 50-110 98-154 (499)
264 2gag_A Heterotetrameric sarcos 46.0 42 0.0014 30.7 6.6 57 49-111 183-252 (965)
265 1lvl_A Dihydrolipoamide dehydr 44.4 50 0.0017 27.0 6.3 43 53-110 102-144 (458)
266 3l8k_A Dihydrolipoyl dehydroge 42.2 26 0.00089 28.8 4.3 48 51-110 93-142 (466)
267 2eq6_A Pyruvate dehydrogenase 42.2 42 0.0014 27.5 5.5 43 53-110 99-141 (464)
268 2wpf_A Trypanothione reductase 40.4 47 0.0016 27.6 5.6 48 52-110 112-165 (495)
269 2hqm_A GR, grase, glutathione 40.2 26 0.00087 29.0 3.9 48 51-110 109-158 (479)
270 1zmd_A Dihydrolipoyl dehydroge 40.0 44 0.0015 27.4 5.3 48 52-111 102-151 (474)
271 4gcm_A TRXR, thioredoxin reduc 39.4 76 0.0026 23.9 6.3 52 48-110 63-114 (312)
272 2ahq_A Sigma-54, RNA polymeras 37.8 39 0.0013 21.3 3.6 42 14-64 13-54 (76)
273 2xve_A Flavin-containing monoo 36.6 37 0.0013 28.0 4.4 22 87-111 254-275 (464)
274 3klj_A NAD(FAD)-dependent dehy 35.9 12 0.00041 30.2 1.2 29 45-73 186-214 (385)
275 2yqu_A 2-oxoglutarate dehydrog 34.3 51 0.0017 26.8 4.8 46 52-110 94-139 (455)
276 4b63_A L-ornithine N5 monooxyg 33.5 51 0.0017 27.5 4.7 43 63-111 355-408 (501)
277 1zk7_A HGII, reductase, mercur 32.4 65 0.0022 26.2 5.2 44 55-110 102-148 (467)
278 3c4a_A Probable tryptophan hyd 31.9 17 0.00058 28.9 1.4 27 47-73 98-124 (381)
279 3lad_A Dihydrolipoamide dehydr 30.6 55 0.0019 26.7 4.4 49 50-110 102-152 (476)
280 2ra9_A Uncharacterized protein 30.5 11 0.00036 27.2 -0.0 41 36-76 33-73 (150)
281 3urh_A Dihydrolipoyl dehydroge 29.5 1.1E+02 0.0036 25.1 6.1 49 50-110 118-168 (491)
282 2r9z_A Glutathione amide reduc 29.2 80 0.0027 25.8 5.2 45 51-110 96-140 (463)
283 1c0p_A D-amino acid oxidase; a 28.9 21 0.00071 27.9 1.5 26 47-73 142-167 (363)
284 1fec_A Trypanothione reductase 28.6 75 0.0026 26.2 5.0 49 51-110 107-161 (490)
285 1mo9_A ORF3; nucleotide bindin 24.9 74 0.0025 26.5 4.3 39 58-110 146-184 (523)
286 1ges_A Glutathione reductase; 23.6 1.1E+02 0.0037 24.8 5.0 45 51-110 97-141 (450)
287 1onf_A GR, grase, glutathione 23.5 56 0.0019 27.1 3.2 50 50-110 92-151 (500)
288 4id3_A DNA repair protein REV1 21.7 94 0.0032 19.0 3.4 17 50-66 23-39 (92)
289 1vk9_A Conserved hypothetical 21.2 29 0.00099 24.9 0.8 30 46-75 89-118 (151)
290 3dk9_A Grase, GR, glutathione 20.2 1.5E+02 0.0053 24.0 5.3 49 49-110 110-158 (478)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.71 E-value=1.3e-16 Score=132.73 Aligned_cols=146 Identities=12% Similarity=0.132 Sum_probs=119.4
Q ss_pred hhhHHhHhCCCCCccccHHHHHHHHHHHHhccccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCC
Q 031284 2 WDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANA 81 (162)
Q Consensus 2 w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~ 81 (162)
|+|++....+.++++.|+..++..+..+... ....++.|+. +.++++|++.++++|++|++|++|++|..++ +
T Consensus 155 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~---~~~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~ 227 (425)
T 3ka7_A 155 ADSFCGWALSLKSDEVPVEEVFEIIENMYRF---GGTGIPEGGC-KGIIDALETVISANGGKIHTGQEVSKILIEN---G 227 (425)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH---CSCEEETTSH-HHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T
T ss_pred HHHHHHHHhCCCcccchHHHHHHHHHHHHhc---CCccccCCCH-HHHHHHHHHHHHHcCCEEEECCceeEEEEEC---C
Confidence 5677777888999999999999888864321 1245678776 5699999999999999999999999999986 5
Q ss_pred cceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhh---cchhhhhhhcCCCCCEEEEEEEeCcccCcccceecc
Q 031284 82 ETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWR---EMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERS 158 (162)
Q Consensus 82 ~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~---~~~~~~~l~~l~~~~~~~v~l~~d~~~~~~~~~~f~ 158 (162)
++++|++ +|+.++||+||+|+|++.+.+|+++... ..++.++++++++++.++++++++++....++++|+
T Consensus 228 --~~~gv~~----~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~ 301 (425)
T 3ka7_A 228 --KAAGIIA----DDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGHTGVLLT 301 (425)
T ss_dssp --EEEEEEE----TTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCSSSEEEC
T ss_pred --EEEEEEE----CCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCcCEEEEC
Confidence 7888865 3788999999999999988889975321 345677888898888999999999998777788877
Q ss_pred cc
Q 031284 159 RS 160 (162)
Q Consensus 159 ~~ 160 (162)
.+
T Consensus 302 ~~ 303 (425)
T 3ka7_A 302 PY 303 (425)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 2
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.61 E-value=1.8e-15 Score=128.46 Aligned_cols=114 Identities=15% Similarity=0.128 Sum_probs=76.5
Q ss_pred eeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh-HHhhc
Q 031284 38 LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP-GIKRL 116 (162)
Q Consensus 38 ~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~-~~~~L 116 (162)
..+++|+. ..|+++|++.++++||+|++|++|++|.+++ + ++++|+++ +|+++.||+||+|++++ ++..|
T Consensus 213 ~~~p~GG~-~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~---~--~~~gV~~~---~g~~~~ad~VV~~a~~~~~~~~L 283 (501)
T 4dgk_A 213 VWFPRGGT-GALVQGMIKLFQDLGGEVVLNARVSHMETTG---N--KIEAVHLE---DGRRFLTQAVASNADVVHTYRDL 283 (501)
T ss_dssp EEEETTHH-HHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TSCEEECSCEEECCC--------
T ss_pred eEEeCCCC-cchHHHHHHHHHHhCCceeeecceeEEEeeC---C--eEEEEEec---CCcEEEcCEEEECCCHHHHHHHh
Confidence 45688887 5699999999999999999999999999997 5 89999987 89999999999999987 56778
Q ss_pred CCchhhcchhhhhhhcCCCCC-EEEEEEEeCcccCcc--cceecccc
Q 031284 117 LPSSWREMKFFNNIYALVGVP-VVTVQLRYNGWVTEL--QDLERSRS 160 (162)
Q Consensus 117 l~~~~~~~~~~~~l~~l~~~~-~~~v~l~~d~~~~~~--~~~~f~~~ 160 (162)
+++......+.+++++.+.++ .+++|+.++++.+++ ++++|+++
T Consensus 284 l~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~ 330 (501)
T 4dgk_A 284 LSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPR 330 (501)
T ss_dssp -------------------CCEEEEEEEEESSCCTTSCSEEEEEECC
T ss_pred ccccccchhhhhhhhccccCCceeEEEecccCCccccccceeccccc
Confidence 887654444556677776444 888999999988754 47887764
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.59 E-value=1.6e-14 Score=120.46 Aligned_cols=144 Identities=10% Similarity=0.087 Sum_probs=115.5
Q ss_pred hhhHHhHhCCCCCccccHHHHHHHHHHHHhccccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCC
Q 031284 2 WDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANA 81 (162)
Q Consensus 2 w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~ 81 (162)
++|++....+.++++.|+..++..+..+... ....++.|+. ..++++|++.++++|++|++|++|++|..++ +
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~ 220 (421)
T 3nrn_A 148 LESFAGWADSVSLSDLTALELAKEIRAALRW---GGPGLIRGGC-KAVIDELERIIMENKGKILTRKEVVEINIEE---K 220 (421)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH---CSCEEETTCH-HHHHHHHHHHHHTTTCEEESSCCEEEEETTT---T
T ss_pred HHHHHHHhcCCCcccCCHHHHHHHHHHHhhc---CCcceecCCH-HHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC---C
Confidence 5677777789999999999999888864321 1245688775 6699999999999999999999999999876 4
Q ss_pred cceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCcccCcccceecccc
Q 031284 82 ETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRS 160 (162)
Q Consensus 82 ~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~~~~~~~~f~~~ 160 (162)
++ | .. +|+.++||.||+|++++.+.+|++.......+.+++.++++.+.+++++.++++....+++++++|
T Consensus 221 --~v--V-~~---~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~ 291 (421)
T 3nrn_A 221 --KV--Y-TR---DNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPG 291 (421)
T ss_dssp --EE--E-ET---TCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSCSSEEECTT
T ss_pred --EE--E-Ee---CCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcccCCeEEEcCC
Confidence 55 4 33 678899999999999998888988432233466788888888899999999998656668888775
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.48 E-value=4.2e-13 Score=113.12 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=108.6
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHHhc---------------------------cccceeeEeCCCCcccchHHH
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK---------------------------TEASLLRMLKGSPDVYLSGPI 53 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~---------------------------~~~~~~~~~~g~~~~~l~~~l 53 (162)
+|+|++.+....++++.|+..++..+....+. .....+..+.|++ +.++++|
T Consensus 162 ~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l 240 (477)
T 3nks_A 162 AMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGL-EMLPQAL 240 (477)
T ss_dssp THHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCT-THHHHHH
T ss_pred HHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCH-HHHHHHH
Confidence 57899999999999999999987765542110 1122456777777 4699999
Q ss_pred HHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcC
Q 031284 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYAL 133 (162)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l 133 (162)
++.++++|++|++|++|++|..+++ ++..|.+ +++.+.||+||+|+|++.+.+|+++.. .+..+.+.++
T Consensus 241 ~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v~~----~~~~~~ad~vv~a~p~~~~~~ll~~~~--~~~~~~l~~~ 309 (477)
T 3nks_A 241 ETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKVSL----RDSSLEADHVISAIPASVLSELLPAEA--APLARALSAI 309 (477)
T ss_dssp HHHHHHTTCEEECSCCCCEEEECGG-----GCEEEEC----SSCEEEESEEEECSCHHHHHHHSCGGG--HHHHHHHHTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEEEE----CCeEEEcCEEEECCCHHHHHHhccccC--HHHHHHHhcC
Confidence 9999999999999999999998763 3334532 456799999999999999999998632 3456678888
Q ss_pred CCCCEEEEEEEeCcccCc
Q 031284 134 VGVPVVTVQLRYNGWVTE 151 (162)
Q Consensus 134 ~~~~~~~v~l~~d~~~~~ 151 (162)
++.++.+++++|+++..+
T Consensus 310 ~~~~~~~v~l~~~~~~~~ 327 (477)
T 3nks_A 310 TAVSVAVVNLQYQGAHLP 327 (477)
T ss_dssp CEEEEEEEEEEETTCCCS
T ss_pred CCCcEEEEEEEECCCCCC
Confidence 888899999999987643
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.31 E-value=1.9e-11 Score=103.13 Aligned_cols=137 Identities=13% Similarity=0.168 Sum_probs=100.6
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHHh----------------------cccc----ceeeEeCCCCcccchHHHH
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT----------------------KTEA----SLLRMLKGSPDVYLSGPIR 54 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~----------------------~~~~----~~~~~~~g~~~~~l~~~l~ 54 (162)
+|.|++......+|+++|+.+++..+..+.. ...+ ..+.++.|+. +.|++.|+
T Consensus 167 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~ 245 (478)
T 2ivd_A 167 LLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGL-QVLIDALA 245 (478)
T ss_dssp THHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCT-HHHHHHHH
T ss_pred HHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCH-HHHHHHHH
Confidence 4678888888999999999887665543211 1112 4566777777 45888888
Q ss_pred HHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCC
Q 031284 55 KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALV 134 (162)
Q Consensus 55 ~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~ 134 (162)
+.+ |++|++|++|++|..++ + + ..|++....+|+.+.||+||+|+|+..+.+|+|+. .....+.+++++
T Consensus 246 ~~l---g~~i~~~~~V~~i~~~~---~--~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l--~~~~~~~l~~~~ 314 (478)
T 2ivd_A 246 ASL---GDAAHVGARVEGLARED---G--G-WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPL--DDALAALVAGIA 314 (478)
T ss_dssp HHH---GGGEESSEEEEEEECC-------C-CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTT--CHHHHHHHHTCC
T ss_pred HHh---hhhEEcCCEEEEEEecC---C--e-EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhcc--CHHHHHHHhcCC
Confidence 877 78999999999998876 3 3 35555111157789999999999999888888742 233456778888
Q ss_pred CCCEEEEEEEeCccc
Q 031284 135 GVPVVTVQLRYNGWV 149 (162)
Q Consensus 135 ~~~~~~v~l~~d~~~ 149 (162)
+.++..+++.|+++.
T Consensus 315 ~~~~~~v~l~~~~~~ 329 (478)
T 2ivd_A 315 YAPIAVVHLGFDAGT 329 (478)
T ss_dssp BCCEEEEEEEECTTS
T ss_pred CCcEEEEEEEEcccc
Confidence 889999999999875
No 6
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.29 E-value=1.4e-11 Score=105.61 Aligned_cols=136 Identities=14% Similarity=-0.000 Sum_probs=98.7
Q ss_pred hhhHHhHhCCCCCccccHHHHHHHHHHH------HhccccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEe
Q 031284 2 WDPVAYALGFIDCDNISARCMLTIFALF------ATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (162)
Q Consensus 2 w~p~~~~~~~~~~~~~Sa~~~~~~l~~~------~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~ 75 (162)
|+|++....+.+++++|+..++..++.. .....+.....+.|+. +.|++.|++.+ |++|++|++|++|..
T Consensus 165 ~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V~~i~~ 240 (520)
T 1s3e_A 165 ATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGS-GQVSERIMDLL---GDRVKLERPVIYIDQ 240 (520)
T ss_dssp HHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCT-HHHHHHHHHHH---GGGEESSCCEEEEEC
T ss_pred HHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCH-HHHHHHHHHHc---CCcEEcCCeeEEEEE
Confidence 6677777888999999999887665421 1111233445677776 45888887765 899999999999988
Q ss_pred ccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCcccC
Q 031284 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (162)
Q Consensus 76 ~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~~ 150 (162)
++ + ++. |++. +|+.++||+||+|+|+..+.+|+.+...+....+.++++...++..+++.|++++-
T Consensus 241 ~~---~--~v~-v~~~---~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (520)
T 1s3e_A 241 TR---E--NVL-VETL---NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFW 306 (520)
T ss_dssp SS---S--SEE-EEET---TSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGG
T ss_pred CC---C--eEE-EEEC---CCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcc
Confidence 76 3 454 5554 68889999999999999888775221122233456677887789999999998863
No 7
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.22 E-value=2.5e-11 Score=101.47 Aligned_cols=134 Identities=12% Similarity=0.111 Sum_probs=99.7
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHH-------hc---------------cccceeeEeCCCCcccchHHHHHHHH
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFA-------TK---------------TEASLLRMLKGSPDVYLSGPIRKYIT 58 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~-------~~---------------~~~~~~~~~~g~~~~~l~~~l~~~l~ 58 (162)
+|+|++.+....+++++|+...+..+..+. .+ .....+..+.|++. .+++.|++.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~l~~~l~~~l~ 246 (470)
T 3i6d_A 168 LIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQ-TLVEEIEKQLK 246 (470)
T ss_dssp THHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETTCTH-HHHHHHHHTCC
T ss_pred hccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHH-HHHHHHHHhcC
Confidence 578999999999999999998776553211 00 11235556777773 57788877765
Q ss_pred HcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCE
Q 031284 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPV 138 (162)
Q Consensus 59 ~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~ 138 (162)
+ ++|++|++|++|..++ + ++ .|++. +|+.+.||+||+|+|++.+.+|+++. +..+.++++...++
T Consensus 247 ~--~~i~~~~~V~~i~~~~---~--~~-~v~~~---~g~~~~ad~vi~a~p~~~~~~l~~~~----~~~~~~~~~~~~~~ 311 (470)
T 3i6d_A 247 L--TKVYKGTKVTKLSHSG---S--CY-SLELD---NGVTLDADSVIVTAPHKAAAGMLSEL----PAISHLKNMHSTSV 311 (470)
T ss_dssp S--EEEECSCCEEEEEECS---S--SE-EEEES---SSCEEEESEEEECSCHHHHHHHTTTS----TTHHHHHTCEEEEE
T ss_pred C--CEEEeCCceEEEEEcC---C--eE-EEEEC---CCCEEECCEEEECCCHHHHHHHcCCc----hhhHHHhcCCCCce
Confidence 5 8999999999999886 3 33 45554 68789999999999999988888753 33567788888889
Q ss_pred EEEEEEeCcccC
Q 031284 139 VTVQLRYNGWVT 150 (162)
Q Consensus 139 ~~v~l~~d~~~~ 150 (162)
.++++.|+++..
T Consensus 312 ~~v~l~~~~~~~ 323 (470)
T 3i6d_A 312 ANVALGFPEGSV 323 (470)
T ss_dssp EEEEEEESSTTC
T ss_pred EEEEEEECchhc
Confidence 999999999874
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.20 E-value=5.3e-11 Score=101.01 Aligned_cols=139 Identities=9% Similarity=0.001 Sum_probs=100.6
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHHhc----cccceeeEeCCCCcccchHHHHHHHHHcC-cEEEcCceeeEEEe
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK----TEASLLRMLKGSPDVYLSGPIRKYITDKG-GRFHLRWGCREILY 75 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~----~~~~~~~~~~g~~~~~l~~~l~~~l~~~G-g~i~~~~~V~~I~~ 75 (162)
+|+|++....+.++++.|+..++..+.....+ ........+.|+. ..+++.|.+.+++.| ++|++|++|++|..
T Consensus 206 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~ 284 (495)
T 2vvm_A 206 SLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQ-SAFARRFWEEAAGTGRLGYVFGCPVRSVVN 284 (495)
T ss_dssp HHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCH-HHHHHHHHHHHHTTTCEEEESSCCEEEEEE
T ss_pred HHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCH-HHHHHHHHHHhhhcCceEEEeCCEEEEEEE
Confidence 36788888888999999999888665432110 0111233456666 469999999999999 99999999999988
Q ss_pred ccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCccc
Q 031284 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (162)
Q Consensus 76 ~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~ 149 (162)
++ + .+ .|++. +|+.+.||+||+|+|+..+.+|+-....+....+.++.+...++..++|.|+++.
T Consensus 285 ~~---~--~v-~v~~~---~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 285 ER---D--AA-RVTAR---DGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp CS---S--SE-EEEET---TCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred cC---C--EE-EEEEC---CCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 75 3 33 35444 6778999999999999988876411111223345667777778999999999876
No 9
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.20 E-value=2.4e-11 Score=102.51 Aligned_cols=131 Identities=14% Similarity=0.137 Sum_probs=100.4
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHHh-----------cc--------------ccceeeEeCCCCcccchHHHHH
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT-----------KT--------------EASLLRMLKGSPDVYLSGPIRK 55 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~-----------~~--------------~~~~~~~~~g~~~~~l~~~l~~ 55 (162)
+|+|++.+..+.+++++|+.+++..+..+.. .. ....+..++|++. .+++.|++
T Consensus 166 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~l~~~l~~ 244 (475)
T 3lov_A 166 LIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLE-SLIERLEE 244 (475)
T ss_dssp THHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHH-HHHHHHHH
T ss_pred HHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHH-HHHHHHHh
Confidence 6899999999999999999876665543211 01 1345677788874 48888888
Q ss_pred HHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCC
Q 031284 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVG 135 (162)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~ 135 (162)
.+.+ ++|++|++|++|..++ + ++ .|++. +| .+.||+||+|+|++.+.+|+++. +. ..+.++++
T Consensus 245 ~l~~--~~i~~~~~V~~i~~~~---~--~~-~v~~~---~g-~~~ad~vV~a~p~~~~~~ll~~~----~~-~~~~~~~~ 307 (475)
T 3lov_A 245 VLER--SEIRLETPLLAISRED---G--RY-RLKTD---HG-PEYADYVLLTIPHPQVVQLLPDA----HL-PELEQLTT 307 (475)
T ss_dssp HCSS--CEEESSCCCCEEEEET---T--EE-EEECT---TC-CEEESEEEECSCHHHHHHHCTTS----CC-HHHHTCCE
T ss_pred hccC--CEEEcCCeeeEEEEeC---C--EE-EEEEC---CC-eEECCEEEECCCHHHHHHHcCcc----CH-HHHhcCCC
Confidence 7766 8999999999999876 3 33 34433 56 79999999999999998888753 12 57788888
Q ss_pred CCEEEEEEEeCccc
Q 031284 136 VPVVTVQLRYNGWV 149 (162)
Q Consensus 136 ~~~~~v~l~~d~~~ 149 (162)
.++.+++++|+++.
T Consensus 308 ~~~~~v~l~~~~~~ 321 (475)
T 3lov_A 308 HSTATVTMIFDQQQ 321 (475)
T ss_dssp EEEEEEEEEEECCS
T ss_pred CeEEEEEEEECCcC
Confidence 88999999999987
No 10
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.11 E-value=1.3e-10 Score=99.91 Aligned_cols=91 Identities=16% Similarity=0.153 Sum_probs=71.9
Q ss_pred CCccccHHHHHHHHHHHH---hccccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEE
Q 031284 13 DCDNISARCMLTIFALFA---TKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA 89 (162)
Q Consensus 13 ~~~~~Sa~~~~~~l~~~~---~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~ 89 (162)
++.+.||...+..+..|. ....++++.+++|++. .|++++++.++++||+|+++++|++|..+++ | ++++|+
T Consensus 220 ~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~~-~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~--g--~v~gV~ 294 (475)
T 3p1w_A 220 DYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLG-GIPEGFSRMCAINGGTFMLNKNVVDFVFDDD--N--KVCGIK 294 (475)
T ss_dssp GGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTT-HHHHHHHHHHHHC--CEESSCCEEEEEECTT--S--CEEEEE
T ss_pred CcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCHH-HHHHHHHHHHHHcCCEEEeCCeEEEEEEecC--C--eEEEEE
Confidence 355678888877666544 2223678999999985 5999999999999999999999999999332 6 788998
Q ss_pred EEecCCceEEeCCEEEEcCChh
Q 031284 90 MSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 90 ~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+. +|+.+.||+||+|++..
T Consensus 295 ~~---~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 295 SS---DGEIAYCDKVICDPSYV 313 (475)
T ss_dssp ET---TSCEEEEEEEEECGGGC
T ss_pred EC---CCcEEECCEEEECCCcc
Confidence 86 78889999999999754
No 11
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.08 E-value=2e-10 Score=96.23 Aligned_cols=135 Identities=13% Similarity=-0.014 Sum_probs=92.4
Q ss_pred hhhHHhHhCCCCCc-cccHHHHHHHHHHHHh-----ccccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEe
Q 031284 2 WDPVAYALGFIDCD-NISARCMLTIFALFAT-----KTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (162)
Q Consensus 2 w~p~~~~~~~~~~~-~~Sa~~~~~~l~~~~~-----~~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~ 75 (162)
|+|++....+.+|+ +.|+..++..+..... ...+.....+.|+. +.+++.|++.+ |++|++|++|++|..
T Consensus 165 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V~~i~~ 240 (453)
T 2yg5_A 165 IGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGM-QQVSIRMAEAL---GDDVFLNAPVRTVKW 240 (453)
T ss_dssp HHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCT-HHHHHHHHHHH---GGGEECSCCEEEEEE
T ss_pred HHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCCh-HHHHHHHHHhc---CCcEEcCCceEEEEE
Confidence 45666566677898 9999988766543200 00112344567776 45888887765 899999999999998
Q ss_pred ccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCccc
Q 031284 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (162)
Q Consensus 76 ~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~ 149 (162)
++ + +...|+ . +|+.+.||+||+|+|+..+.+|+.....+....+.++++...++..+++.|++++
T Consensus 241 ~~---~--~~v~v~-~---~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 241 NE---S--GATVLA-D---GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp ET---T--EEEEEE-T---TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred eC---C--ceEEEE-E---CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 76 3 312332 2 5778999999999999988887632112223344566777667899999999886
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.08 E-value=1e-10 Score=98.99 Aligned_cols=134 Identities=9% Similarity=0.097 Sum_probs=98.3
Q ss_pred ChhhHHhHhCCCCCccccHHHHHH---------HHHH-HHhcc-----ccceeeE-eCCCCcccchHHHHHHHHHcCcEE
Q 031284 1 MWDPVAYALGFIDCDNISARCMLT---------IFAL-FATKT-----EASLLRM-LKGSPDVYLSGPIRKYITDKGGRF 64 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~---------~l~~-~~~~~-----~~~~~~~-~~g~~~~~l~~~l~~~l~~~Gg~i 64 (162)
+++|++......++++.|+.++.. .+.. +.... ......+ ++|++ +.|+++|++.|++.|++|
T Consensus 161 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~i 239 (513)
T 4gde_A 161 FMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGT-GGIWIAVANTLPKEKTRF 239 (513)
T ss_dssp THHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHH-HHHHHHHHHTSCGGGEEE
T ss_pred hcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCH-HHHHHHHHHHHHhcCeee
Confidence 467888888889999998876532 2222 11111 1123333 46776 569999999999999999
Q ss_pred EcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEE
Q 031284 65 HLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLR 144 (162)
Q Consensus 65 ~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~ 144 (162)
++|++|++|..++ + + +++. +|+.+.||+||+++|++.+.+++++. +.......+++.++.++++.
T Consensus 240 ~~~~~V~~I~~~~---~--~---v~~~---~G~~~~ad~vI~t~P~~~l~~~l~~~----~~~~~~~~l~y~~~~~v~l~ 304 (513)
T 4gde_A 240 GEKGKVTKVNANN---K--T---VTLQ---DGTTIGYKKLVSTMAVDFLAEAMNDQ----ELVGLTKQLFYSSTHVIGVG 304 (513)
T ss_dssp SGGGCEEEEETTT---T--E---EEET---TSCEEEEEEEEECSCHHHHHHHTTCH----HHHHHHTTCCEEEEEEEEEE
T ss_pred ecceEEEEEEccC---C--E---EEEc---CCCEEECCEEEECCCHHHHHHhcCch----hhHhhhhcccCCceEEEEEE
Confidence 9999999999876 3 3 4455 79999999999999999998888753 22345567777788899998
Q ss_pred eCcccC
Q 031284 145 YNGWVT 150 (162)
Q Consensus 145 ~d~~~~ 150 (162)
++++.+
T Consensus 305 ~~~~~~ 310 (513)
T 4gde_A 305 VRGSRP 310 (513)
T ss_dssp EESSCC
T ss_pred Eecccc
Confidence 866543
No 13
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.07 E-value=1.5e-10 Score=98.23 Aligned_cols=139 Identities=14% Similarity=0.052 Sum_probs=93.4
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHHh---------------cc---------------ccceeeEeCCCCcccch
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT---------------KT---------------EASLLRMLKGSPDVYLS 50 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~---------------~~---------------~~~~~~~~~g~~~~~l~ 50 (162)
+|+|++.+....+|++.|+.+++..+..+.+ .. ....+..+.|++ +.|+
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~-~~l~ 246 (504)
T 1sez_A 168 LIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGM-QTLT 246 (504)
T ss_dssp THHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCT-HHHH
T ss_pred HHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHH-HHHH
Confidence 5789998888999999999876544332110 00 011355667777 4588
Q ss_pred HHHHHHHHHcC-cEEEcCceeeEEEeccCCCCcce----EEEEEEEecCCc---eEEeCCEEEEcCChhHHhhcCCchh-
Q 031284 51 GPIRKYITDKG-GRFHLRWGCREILYDKAANAETY----VKGLAMSKATDK---KVVQADAYVAACDVPGIKRLLPSSW- 121 (162)
Q Consensus 51 ~~l~~~l~~~G-g~i~~~~~V~~I~~~~~~~~~~~----v~gv~~~~~~~g---~~~~aD~VVsa~~~~~~~~Ll~~~~- 121 (162)
++|++.+ | ++|++|++|++|..+++ + . ...|++.. ++| +.+.||+||+|+|++.+.+++++..
T Consensus 247 ~~l~~~l---~~~~i~~~~~V~~I~~~~~--~--~~~~~~~~v~~~~-~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~ 318 (504)
T 1sez_A 247 DAICKDL---REDELRLNSRVLELSCSCT--E--DSAIDSWSIISAS-PHKRQSEEESFDAVIMTAPLCDVKSMKIAKRG 318 (504)
T ss_dssp HHHHTTS---CTTTEETTCCEEEEEEECS--S--SSSSCEEEEEEBC-SSSSCBCCCEESEEEECSCHHHHHTSEEESSS
T ss_pred HHHHhhc---ccceEEcCCeEEEEEecCC--C--CcccceEEEEEcC-CCCccceeEECCEEEECCCHHHHHHHhhcccC
Confidence 8887654 5 89999999999998763 2 1 14555531 234 5789999999999999988873210
Q ss_pred hcchhhhhhhcCCCCCEEEEEEEeCccc
Q 031284 122 REMKFFNNIYALVGVPVVTVQLRYNGWV 149 (162)
Q Consensus 122 ~~~~~~~~l~~l~~~~~~~v~l~~d~~~ 149 (162)
...+ ...+.++.+.++..+++.|+++.
T Consensus 319 ~~~~-~~~l~~~~~~~~~~v~l~~~~~~ 345 (504)
T 1sez_A 319 NPFL-LNFIPEVDYVPLSVVITTFKREN 345 (504)
T ss_dssp SBCC-CTTSCCCCEEEEEEEEEEEEGGG
T ss_pred Cccc-HHHHhcCCCCceEEEEEEEchhh
Confidence 0111 11256667668999999998875
No 14
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.03 E-value=1.1e-09 Score=93.73 Aligned_cols=136 Identities=11% Similarity=0.118 Sum_probs=98.9
Q ss_pred ChhhHHhHhCCCCCccccHHH---------HHHHHHHHHhcc------ccceeeEeC-CCCcccchHHHHHHHHHcCcEE
Q 031284 1 MWDPVAYALGFIDCDNISARC---------MLTIFALFATKT------EASLLRMLK-GSPDVYLSGPIRKYITDKGGRF 64 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~---------~~~~l~~~~~~~------~~~~~~~~~-g~~~~~l~~~l~~~l~~~Gg~i 64 (162)
+++|++.+....+|++.|+.+ +..+++...... ....+.|+. |++ +.|+++|++.+.+. +|
T Consensus 155 ~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~-~~l~~~la~~l~~~--~i 231 (484)
T 4dsg_A 155 FMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGT-GIIYQAIKEKLPSE--KL 231 (484)
T ss_dssp CCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCT-HHHHHHHHHHSCGG--GE
T ss_pred HHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCH-HHHHHHHHhhhhhC--eE
Confidence 578999999999999999975 333444433211 233566664 676 46899999988653 89
Q ss_pred EcC--ceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCch--hhcchhhhhhhcCCCCCEEE
Q 031284 65 HLR--WGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSS--WREMKFFNNIYALVGVPVVT 140 (162)
Q Consensus 65 ~~~--~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~--~~~~~~~~~l~~l~~~~~~~ 140 (162)
+++ ++|++|..++ + + |++. +|+.+.||+||+|+|++.+.+++++. .......+.+.++++.++..
T Consensus 232 ~~~~~~~V~~I~~~~---~--~---v~~~---~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~ 300 (484)
T 4dsg_A 232 TFNSGFQAIAIDADA---K--T---ITFS---NGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNV 300 (484)
T ss_dssp EECGGGCEEEEETTT---T--E---EEET---TSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEE
T ss_pred EECCCceeEEEEecC---C--E---EEEC---CCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEE
Confidence 999 5699998875 3 3 4454 68889999999999999988887531 11233455678888888999
Q ss_pred EEEEeCcccC
Q 031284 141 VQLRYNGWVT 150 (162)
Q Consensus 141 v~l~~d~~~~ 150 (162)
+++.|+++.+
T Consensus 301 v~l~~~~~~~ 310 (484)
T 4dsg_A 301 IGIGVKGTPP 310 (484)
T ss_dssp EEEEEESCCC
T ss_pred EEEEEcCCCc
Confidence 9999988753
No 15
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.88 E-value=2.8e-09 Score=90.24 Aligned_cols=100 Identities=10% Similarity=0.006 Sum_probs=75.8
Q ss_pred ceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc---eEEeCCEEEEcCChhH
Q 031284 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK---KVVQADAYVAACDVPG 112 (162)
Q Consensus 36 ~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g---~~~~aD~VVsa~~~~~ 112 (162)
..+..+.|+. +.|++.|++.+.+ ++|++|++|++|..++ + ++. |++. +| +.+.||+||+|+|+..
T Consensus 229 ~~~~~~~gG~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~---~--~v~-v~~~---~g~~~~~~~ad~vI~a~p~~~ 296 (489)
T 2jae_A 229 MMMFTPVGGM-DRIYYAFQDRIGT--DNIVFGAEVTSMKNVS---E--GVT-VEYT---AGGSKKSITADYAICTIPPHL 296 (489)
T ss_dssp SSEEEETTCT-THHHHHHHHHHCG--GGEETTCEEEEEEEET---T--EEE-EEEE---ETTEEEEEEESEEEECSCHHH
T ss_pred ccEEeecCCH-HHHHHHHHHhcCC--CeEEECCEEEEEEEcC---C--eEE-EEEe---cCCeEEEEECCEEEECCCHHH
Confidence 3455667776 4699999988754 8999999999999876 3 443 5444 34 6799999999999998
Q ss_pred HhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCccc
Q 031284 113 IKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (162)
Q Consensus 113 ~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~ 149 (162)
+.+|+.+ .+....+.++++.+.++..+++.|++++
T Consensus 297 l~~l~~~--l~~~~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 297 VGRLQNN--LPGDVLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp HTTSEEC--CCHHHHHHHHTEECCCEEEEEEEESSCH
T ss_pred HHhCccC--CCHHHHHHHHhCCCccceEEEEEeCCCC
Confidence 8887642 1223455677888888999999999875
No 16
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.84 E-value=2.7e-09 Score=90.23 Aligned_cols=99 Identities=15% Similarity=0.061 Sum_probs=74.4
Q ss_pred CCCCcccchHHHHHHHHHc--------CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHH
Q 031284 42 KGSPDVYLSGPIRKYITDK--------GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGI 113 (162)
Q Consensus 42 ~g~~~~~l~~~l~~~l~~~--------Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~ 113 (162)
.|++ +.+++.|++.+.+. |++|++|++|++|..++ + ++. |++. +|+.++||+||+|+|+..+
T Consensus 202 ~gG~-~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~---~--~v~-v~~~---~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 202 QRGY-EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP---G--GVT-VKTE---DNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp TTCT-THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS---S--CEE-EEET---TSCEEEESEEEECSCHHHH
T ss_pred CCcH-HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC---C--cEE-EEEC---CCCEEEcCEEEEecCHHHh
Confidence 5666 45889999888776 78999999999999876 3 443 5554 7888999999999999988
Q ss_pred hhcCCc--hhhcchhhhhhhcCCCCCEEEEEEEeCcccC
Q 031284 114 KRLLPS--SWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (162)
Q Consensus 114 ~~Ll~~--~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~~ 150 (162)
.+++.. ...+....+.++++...++..+++.|+++.-
T Consensus 272 ~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w 310 (472)
T 1b37_A 272 QSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFW 310 (472)
T ss_dssp HTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCS
T ss_pred ccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCC
Confidence 775421 1112234556777776678899999998764
No 17
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.74 E-value=9.3e-08 Score=77.26 Aligned_cols=90 Identities=16% Similarity=0.008 Sum_probs=69.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchh--hcc
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSW--REM 124 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~--~~~ 124 (162)
..+.+.+++.+ |++|+++++|++|..++ + ++ .|.+. +|+.+.||.||+|+|++.+.+|+++.. .+.
T Consensus 112 ~~l~~~l~~~~---g~~i~~~~~V~~i~~~~---~--~~-~v~~~---~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~ 179 (342)
T 3qj4_A 112 SSIIKHYLKES---GAEVYFRHRVTQINLRD---D--KW-EVSKQ---TGSPEQFDLIVLTMPVPEILQLQGDITTLISE 179 (342)
T ss_dssp THHHHHHHHHH---TCEEESSCCEEEEEECS---S--SE-EEEES---SSCCEEESEEEECSCHHHHTTCBSTHHHHSCH
T ss_pred HHHHHHHHHhc---CCEEEeCCEEEEEEEcC---C--EE-EEEEC---CCCEEEcCEEEECCCHHHHHHHhcccccccCH
Confidence 34666666554 99999999999999876 3 33 35444 677789999999999999988987521 122
Q ss_pred hhhhhhhcCCCCCEEEEEEEeCcc
Q 031284 125 KFFNNIYALVGVPVVTVQLRYNGW 148 (162)
Q Consensus 125 ~~~~~l~~l~~~~~~~v~l~~d~~ 148 (162)
...+.+.++++.|+.++++.|+++
T Consensus 180 ~~~~~l~~~~~~~~~~v~l~~~~~ 203 (342)
T 3qj4_A 180 CQRQQLEAVSYSSRYALGLFYEAG 203 (342)
T ss_dssp HHHHHHHTCCBCCEEEEEEECSSC
T ss_pred HHHHHHhcCCccccEEEEEEECCC
Confidence 346788999999999999999976
No 18
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.68 E-value=1.6e-07 Score=83.35 Aligned_cols=85 Identities=12% Similarity=0.036 Sum_probs=65.1
Q ss_pred ccHHHHHHHHHHHHh---ccccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEec
Q 031284 17 ISARCMLTIFALFAT---KTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA 93 (162)
Q Consensus 17 ~Sa~~~~~~l~~~~~---~~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~ 93 (162)
.++...+..+..|+. .-..+.+.++.||. ..|+++|.+.+++.||+|++|++|++|.++++ +| +++||++.
T Consensus 346 ~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~-g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~-~g--~v~gV~~~-- 419 (650)
T 1vg0_A 346 SCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQ-GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKE-SR--KCKAVIDQ-- 419 (650)
T ss_dssp CBHHHHHHHHHHHHHHTTSSSSSSEEEETTCT-THHHHHHHHHHHHTTCEEESSCCEEEEEEETT-TC--CEEEEEET--
T ss_pred CchhHHHHHHHHHHHHHHhhccCceEEeCCch-hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCC-CC--eEEEEEeC--
Confidence 455555544444432 22235889999996 56999999999999999999999999999751 15 78898755
Q ss_pred CCceEEeCCEEEEcC
Q 031284 94 TDKKVVQADAYVAAC 108 (162)
Q Consensus 94 ~~g~~~~aD~VVsa~ 108 (162)
+|+.+.||+||++.
T Consensus 420 -~Ge~i~A~~VVs~~ 433 (650)
T 1vg0_A 420 -FGQRIISKHFIIED 433 (650)
T ss_dssp -TSCEEECSEEEEEG
T ss_pred -CCCEEEcCEEEECh
Confidence 78999999999943
No 19
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.53 E-value=2.1e-07 Score=78.29 Aligned_cols=90 Identities=13% Similarity=0.100 Sum_probs=67.3
Q ss_pred CCccccHHHHHHHHHHHHh--c-cccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEE
Q 031284 13 DCDNISARCMLTIFALFAT--K-TEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA 89 (162)
Q Consensus 13 ~~~~~Sa~~~~~~l~~~~~--~-~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~ 89 (162)
++.+.++...+..+..+.. + ...+.+.++.|+. ..++++|++.+++.|++|++|++|++|..++ + ++.+|+
T Consensus 198 ~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~---~--~v~~v~ 271 (433)
T 1d5t_A 198 DYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGL-GELPQGFARLSAIYGGTYMLNKPVDDIIMEN---G--KVVGVK 271 (433)
T ss_dssp GGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCT-THHHHHHHHHHHHHTCCCBCSCCCCEEEEET---T--EEEEEE
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCH-HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC---C--EEEEEE
Confidence 4556666544333333332 1 2234577888885 5799999999999999999999999999876 5 777775
Q ss_pred EEecCCceEEeCCEEEEcCChhH
Q 031284 90 MSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 90 ~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
. +|+.+.||+||+|+++..
T Consensus 272 -~---~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 272 -S---EGEVARCKQLICDPSYVP 290 (433)
T ss_dssp -E---TTEEEECSEEEECGGGCG
T ss_pred -E---CCeEEECCEEEECCCCCc
Confidence 3 588999999999999763
No 20
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.51 E-value=5.1e-07 Score=76.41 Aligned_cols=98 Identities=12% Similarity=0.062 Sum_probs=72.5
Q ss_pred eeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce----EEeCCEEEEcCChhH
Q 031284 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDVPG 112 (162)
Q Consensus 37 ~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~----~~~aD~VVsa~~~~~ 112 (162)
.+..+.|+. +.|+++|++.+.+ +|++|++|++|..++ + ++ .|.+. +|+ .++||+||+|+|+..
T Consensus 232 ~~~~~~gG~-~~l~~~l~~~l~~---~i~~~~~V~~I~~~~---~--~v-~v~~~---~~~~~~~~~~ad~vI~t~p~~~ 298 (498)
T 2iid_A 232 RFDEIVDGM-DKLPTAMYRDIQD---KVHFNAQVIKIQQND---Q--KV-TVVYE---TLSKETPSVTADYVIVCTTSRA 298 (498)
T ss_dssp CEEEETTCT-THHHHHHHHHTGG---GEESSCEEEEEEECS---S--CE-EEEEE---CSSSCCCEEEESEEEECSCHHH
T ss_pred ceEEeCCcH-HHHHHHHHHhccc---ccccCCEEEEEEECC---C--eE-EEEEe---cCCcccceEEeCEEEECCChHH
Confidence 344566776 4689999888765 899999999999876 3 33 45454 333 589999999999998
Q ss_pred HhhcC--CchhhcchhhhhhhcCCCCCEEEEEEEeCccc
Q 031284 113 IKRLL--PSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (162)
Q Consensus 113 ~~~Ll--~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~ 149 (162)
+.++. |+ .+....+.++++...++..+++.|++++
T Consensus 299 ~~~i~f~p~--Lp~~~~~ai~~l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 299 VRLIKFNPP--LLPKKAHALRSVHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp HTTSEEESC--CCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred HhheecCCC--CCHHHHHHHHhCCCcceeEEEEEeCCCC
Confidence 87753 32 2223455677888778999999999876
No 21
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.48 E-value=1.2e-06 Score=72.59 Aligned_cols=131 Identities=15% Similarity=0.075 Sum_probs=81.6
Q ss_pred hhHHhHhCCCCCccccHHHHHHHHHHHHhc----cccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccC
Q 031284 3 DPVAYALGFIDCDNISARCMLTIFALFATK----TEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKA 78 (162)
Q Consensus 3 ~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~----~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~ 78 (162)
.+++......+++++|+..+...+...... -..... .+.+++ ..-+.+.+++.| +|++|++|++|..++
T Consensus 161 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~----~~l~~~~~~~~g-~i~~~~~V~~i~~~~- 233 (431)
T 3k7m_X 161 LAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGS----ADLVDAMSQEIP-EIRLQTVVTGIDQSG- 233 (431)
T ss_dssp HHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCT----HHHHHHHHTTCS-CEESSCCEEEEECSS-
T ss_pred HHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcH----HHHHHHHHhhCC-ceEeCCEEEEEEEcC-
Confidence 345556677788889998887666532100 001111 344444 222333334456 999999999998876
Q ss_pred CCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcC--CchhhcchhhhhhhcCCCCCEEEEEEEeCcccC
Q 031284 79 ANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLL--PSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (162)
Q Consensus 79 ~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll--~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~~ 150 (162)
+ ++ .|++. +|+.++||+||+|+++..+.++. |+ .+....+.+..+.....+-+.+.|+.+++
T Consensus 234 --~--~v-~v~~~---~g~~~~ad~vi~a~~~~~l~~i~~~p~--l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 234 --D--VV-NVTVK---DGHAFQAHSVIVATPMNTWRRIVFTPA--LPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp --S--SE-EEEET---TSCCEEEEEEEECSCGGGGGGSEEESC--CCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred --C--eE-EEEEC---CCCEEEeCEEEEecCcchHhheeeCCC--CCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 3 33 35444 67789999999999999887763 22 11122334555555567888898888764
No 22
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.46 E-value=3.5e-07 Score=78.19 Aligned_cols=97 Identities=9% Similarity=0.008 Sum_probs=69.5
Q ss_pred EeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhc---
Q 031284 40 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL--- 116 (162)
Q Consensus 40 ~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~L--- 116 (162)
++.| -+.+++.|++.+. +++|++|++|++|..+++ + ...|++. +|+.++||+||+|+|+..++..
T Consensus 197 ~~~g--~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~--~---~v~v~~~---~g~~~~ad~VI~t~p~~~l~~~~~~ 264 (516)
T 1rsg_A 197 FALN--YDSVVQRIAQSFP--QNWLKLSCEVKSITREPS--K---NVTVNCE---DGTVYNADYVIITVPQSVLNLSVQP 264 (516)
T ss_dssp EESC--HHHHHHHHHTTSC--GGGEETTCCEEEEEECTT--S---CEEEEET---TSCEEEEEEEEECCCHHHHHGGGSS
T ss_pred hhhC--HHHHHHHHHHhCC--CCEEEECCEEEEEEEcCC--C---eEEEEEC---CCcEEECCEEEECCCHHHhhhcccc
Confidence 4555 3556666666654 378999999999998632 2 2356555 7878999999999999988643
Q ss_pred ----------CCchhhcchhhhhhhcCCCCCEEEEEEEeCcccC
Q 031284 117 ----------LPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (162)
Q Consensus 117 ----------l~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~~ 150 (162)
.|+ .+....+.++++...++.-+++.|+++.=
T Consensus 265 ~~~~~~~i~f~P~--Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW 306 (516)
T 1rsg_A 265 EKNLRGRIEFQPP--LKPVIQDAFDKIHFGALGKVIFEFEECCW 306 (516)
T ss_dssp CSCSTTCCEEESC--CCHHHHHHTTSSCCCCCEEEEEEESSCCS
T ss_pred ccccccceEecCC--CCHHHHHHHHhCCCCcceEEEEEeCCCCC
Confidence 232 12234556778888789999999999874
No 23
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.45 E-value=7.3e-07 Score=75.33 Aligned_cols=67 Identities=16% Similarity=0.094 Sum_probs=57.6
Q ss_pred cceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEec--cCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 35 ASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYD--KAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 35 ~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~--~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.++.|+.. .++++|++.++++||+|++|++|++|..+ + + ++++|++ +|+.+.||+||+|+++.
T Consensus 231 ~~~~~~p~gG~~-~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~---~--~~~~V~~----~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 231 KSPYLYPMYGLG-ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT---G--KFEGVKT----KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp SCSEEEETTCTT-HHHHHHHHHHHHTTCEEECSCCCCEEEEETTT---T--EEEEEEE----TTEEEECSCEEECGGGC
T ss_pred CCceEeeCCCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEECCC---C--eEEEEEE----CCeEEECCEEEECCCcc
Confidence 356778888874 69999999999999999999999999987 5 5 7778865 47889999999999876
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.35 E-value=3.8e-07 Score=75.49 Aligned_cols=95 Identities=12% Similarity=0.130 Sum_probs=62.7
Q ss_pred CCCCCccccHHHHHHHHHH--HHhccccceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEE
Q 031284 10 GFIDCDNISARCMLTIFAL--FATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKG 87 (162)
Q Consensus 10 ~~~~~~~~Sa~~~~~~l~~--~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~g 87 (162)
.+.+++++||..++..+.. ......+... .+.|++ +.+++.+.+.+ +.+|++|++|++|..++ + ++.
T Consensus 169 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~~l~~~l~~~l---~~~v~~~~~V~~i~~~~---~--~v~- 237 (424)
T 2b9w_A 169 GYGHFDNVPAAYVLKYLDFVTMMSFAKGDLW-TWADGT-QAMFEHLNATL---EHPAERNVDITRITRED---G--KVH- 237 (424)
T ss_dssp CCCCTTTSBHHHHHHHSCHHHHHHHHHTCCB-CCTTCH-HHHHHHHHHHS---SSCCBCSCCEEEEECCT---T--CEE-
T ss_pred ccCChHhcCHHHHHHhhhHhhhhcccCCceE-EeCChH-HHHHHHHHHhh---cceEEcCCEEEEEEEEC---C--EEE-
Confidence 3456789999887544332 1111111222 244554 45777776554 67899999999999876 4 443
Q ss_pred EEEEecCCceEEeCCEEEEcCChhHHhhcCCc
Q 031284 88 LAMSKATDKKVVQADAYVAACDVPGIKRLLPS 119 (162)
Q Consensus 88 v~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~ 119 (162)
|++. +|+ +.||+||+|+|+..+.+++++
T Consensus 238 v~~~---~g~-~~ad~Vv~a~~~~~~~~~l~~ 265 (424)
T 2b9w_A 238 IHTT---DWD-RESDVLVLTVPLEKFLDYSDA 265 (424)
T ss_dssp EEES---SCE-EEESEEEECSCHHHHTTSBCC
T ss_pred EEEC---CCe-EEcCEEEECCCHHHHhhccCC
Confidence 5554 454 899999999999988777775
No 25
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.20 E-value=4.8e-06 Score=73.71 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=68.4
Q ss_pred eEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe---cCCceEEeCCEEEEcCChhHHhh
Q 031284 39 RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDKKVVQADAYVAACDVPGIKR 115 (162)
Q Consensus 39 ~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~---~~~g~~~~aD~VVsa~~~~~~~~ 115 (162)
..+.|++ +.|+++|++ |.+|++|++|++|..+++ .+ .|++.. +++++.+.||+||+++|+..+++
T Consensus 394 ~~~~gG~-~~l~~~La~-----~l~I~l~~~V~~I~~~~~-----~v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~ 461 (662)
T 2z3y_A 394 LTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTAS-----GC-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 461 (662)
T ss_dssp EEETTCT-THHHHHHTT-----TCEEETTEEEEEEEEETT-----EE-EEEEEESSCTTCEEEEEESEEEECCCHHHHHC
T ss_pred eeecCcH-HHHHHHHHh-----cCceecCCeEEEEEECCC-----cE-EEEEeecccCCCCeEEEeCEEEECCCHHHHhc
Confidence 3445666 346666654 569999999999998863 23 344431 11256899999999999999987
Q ss_pred cC------CchhhcchhhhhhhcCCCCCEEEEEEEeCcccCc
Q 031284 116 LL------PSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTE 151 (162)
Q Consensus 116 Ll------~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~~~ 151 (162)
+. |+ .+....+.++++...++.-++|.|+++.-+
T Consensus 462 l~~~i~f~P~--LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~ 501 (662)
T 2z3y_A 462 QPPAVQFVPP--LPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 501 (662)
T ss_dssp SSCSSEEESC--CCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred ccCceEEcCC--CCHHHHHHHHhCCccceeEEEEEcCccccc
Confidence 42 32 111223456777777899999999998754
No 26
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.11 E-value=8e-06 Score=74.58 Aligned_cols=103 Identities=10% Similarity=0.035 Sum_probs=69.4
Q ss_pred eeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe---cCCceEEeCCEEEEcCChhHHh
Q 031284 38 LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDKKVVQADAYVAACDVPGIK 114 (162)
Q Consensus 38 ~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~---~~~g~~~~aD~VVsa~~~~~~~ 114 (162)
+..+.||+ +.|++.|++ +.+|++|++|++|..+++ .+ .|++.. ++.++.+.||+||+++|+..++
T Consensus 564 ~~~~~gG~-~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~-----gV-~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk 631 (852)
T 2xag_A 564 HLTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTAS-----GC-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLK 631 (852)
T ss_dssp CEEETTCT-THHHHHHTT-----TCCEECSEEEEEEEEETT-----EE-EEEEEESSSTTCEEEEEESEEEECCCHHHHH
T ss_pred eEEecCcH-HHHHHHHHh-----CCCEEeCCeEEEEEEcCC-----cE-EEEEeecccCCCCeEEECCEEEECCCHHHHH
Confidence 34456666 346666654 458999999999999863 33 344431 1125789999999999999998
Q ss_pred hcCCch----hhcchhhhhhhcCCCCCEEEEEEEeCcccCcc
Q 031284 115 RLLPSS----WREMKFFNNIYALVGVPVVTVQLRYNGWVTEL 152 (162)
Q Consensus 115 ~Ll~~~----~~~~~~~~~l~~l~~~~~~~v~l~~d~~~~~~ 152 (162)
+++..- ..+....+.++++...++..++|.|++++-+.
T Consensus 632 ~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~ 673 (852)
T 2xag_A 632 QQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP 673 (852)
T ss_dssp CSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT
T ss_pred hhhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCC
Confidence 753210 01111233567777778999999999987543
No 27
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.98 E-value=6.4e-05 Score=59.75 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEE-eCCEEEEcCChhHHhhcCCchhhcchhhhh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVV-QADAYVAACDVPGIKRLLPSSWREMKFFNN 129 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~-~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~ 129 (162)
+.+.+.+.+ |++|+++++|++|..+++ + + .|++. +|+.. .||.||.+.+.+...++++.. .+....
T Consensus 110 ~~l~~~l~~-g~~i~~~~~v~~i~~~~~--~---~-~v~~~---~g~~~~~a~~vV~a~g~~~~~~~~~~~---~~l~~~ 176 (336)
T 1yvv_A 110 SAITRAMRG-DMPVSFSCRITEVFRGEE--H---W-NLLDA---EGQNHGPFSHVIIATPAPQASTLLAAA---PKLASV 176 (336)
T ss_dssp HHHHHHHHT-TCCEECSCCEEEEEECSS--C---E-EEEET---TSCEEEEESEEEECSCHHHHGGGGTTC---HHHHHH
T ss_pred HHHHHHHHc-cCcEEecCEEEEEEEeCC--E---E-EEEeC---CCcCccccCEEEEcCCHHHHHHhhccC---HHHHHH
Confidence 345555444 999999999999998763 3 3 34443 66665 499999999999888777532 223456
Q ss_pred hhcCCCCCEEEEEEEeCcccC
Q 031284 130 IYALVGVPVVTVQLRYNGWVT 150 (162)
Q Consensus 130 l~~l~~~~~~~v~l~~d~~~~ 150 (162)
+..+.+.++.++++.|+++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~ 197 (336)
T 1yvv_A 177 VAGVKMDPTWAVALAFETPLQ 197 (336)
T ss_dssp HTTCCEEEEEEEEEEESSCCS
T ss_pred HhhcCccceeEEEEEecCCCC
Confidence 677777789999999988764
No 28
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.97 E-value=1.7e-05 Score=71.79 Aligned_cols=80 Identities=15% Similarity=0.123 Sum_probs=57.5
Q ss_pred cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhh-c---CCchhhcchhhhhhhcCCC
Q 031284 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKR-L---LPSSWREMKFFNNIYALVG 135 (162)
Q Consensus 60 ~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~-L---l~~~~~~~~~~~~l~~l~~ 135 (162)
.|++|++|++|++|..++ + ++ .|++. +|+.+.||+||+|+|+..+++ . .|+ .+....+.+.++..
T Consensus 542 ~gl~I~l~t~V~~I~~~~---~--~v-~V~~~---~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~--Lp~~~~~ai~~l~~ 610 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSG---D--EV-QVTTT---DGTGYSAQKVLVTVPLALLQKGAIQFNPP--LSEKKMKAINSLGA 610 (776)
T ss_dssp TTSCEESSCCEEEEECSS---S--SE-EEEET---TCCEEEESEEEECCCHHHHHTTCSEEESC--CCHHHHHHHHHEEE
T ss_pred hCCcEEcCCeeEEEEEcC---C--EE-EEEEC---CCcEEEcCEEEECCCHHHHhhcccccCCC--CCHHHHHHHHhCCC
Confidence 488999999999999876 3 33 34444 677899999999999998875 2 222 11223445666665
Q ss_pred CCEEEEEEEeCcccC
Q 031284 136 VPVVTVQLRYNGWVT 150 (162)
Q Consensus 136 ~~~~~v~l~~d~~~~ 150 (162)
.++..+++.|++++=
T Consensus 611 g~~~KV~l~f~~~FW 625 (776)
T 4gut_A 611 GIIEKIALQFPYRFW 625 (776)
T ss_dssp ECCEEEEEECSSCTT
T ss_pred eeEEEEEEecCcccc
Confidence 568888999988753
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.95 E-value=1.2e-07 Score=78.20 Aligned_cols=111 Identities=11% Similarity=-0.089 Sum_probs=73.8
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHHh-ccc-ccee-eEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEecc
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT-KTE-ASLL-RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~-~~~-~~~~-~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~ 77 (162)
+|+|++.+..+.+|+++||.++..+...+.. +.. ...+ ++++|++ ..++++|++ |++|++|++|++|. .
T Consensus 147 ~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~-----g~~i~l~~~V~~i~--~ 218 (367)
T 1i8t_A 147 LIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGY-TKLIEKMLE-----GVDVKLGIDFLKDK--D 218 (367)
T ss_dssp HTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCH-HHHHHHHHT-----TSEEECSCCGGGSH--H
T ss_pred HHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCH-HHHHHHHhc-----CCEEEeCCceeeec--h
Confidence 4789999999999999998865211111111 111 2233 4888887 446677665 79999999998872 2
Q ss_pred CCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCccc
Q 031284 78 AANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (162)
Q Consensus 78 ~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~ 149 (162)
+ + . ..+|+||+|+|++.+.++ .+.++++.++.++++.+|++.
T Consensus 219 ------~---v--~-------~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 219 ------S---L--A-------SKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp ------H---H--H-------TTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSC
T ss_pred ------h---h--h-------ccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEEecccc
Confidence 2 1 1 259999999999876533 233455556777777777653
No 30
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.79 E-value=5.5e-05 Score=62.76 Aligned_cols=58 Identities=14% Similarity=0.144 Sum_probs=50.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCc---eeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRW---GCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~---~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+.+.|.+.++++|++|++++ +|++|..++ + +++||++. +|+.+.||.||.|+...+
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~---~--~v~gV~t~---~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN---N--DVKGAVTA---DGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET---T--EEEEEEET---TTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC---C--eEEEEEEC---CCCEEECCEEEECCCCCh
Confidence 3688899999999999999999 999999876 5 78888876 777899999999998764
No 31
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.77 E-value=1.7e-06 Score=72.65 Aligned_cols=110 Identities=10% Similarity=-0.047 Sum_probs=73.5
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHHhccc--ccee-eEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEecc
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKTE--ASLL-RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~--~~~~-~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~ 77 (162)
||+|++......+|+++||.++..+-.++..... ...+ ++|+|++. .|++.|+ ++.|++|++|++|+++
T Consensus 175 ~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~-~l~e~l~---~~~g~~V~l~~~v~~~---- 246 (397)
T 3hdq_A 175 FFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYT-RMFQNML---SSPNIKVMLNTDYREI---- 246 (397)
T ss_dssp HTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHH-HHHHHHT---CSTTEEEEESCCGGGT----
T ss_pred HHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHH-HHHHHHH---hccCCEEEECCeEEec----
Confidence 5899999999999999999866422111211111 1244 58999884 4666664 4679999999999732
Q ss_pred CCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCcc
Q 031284 78 AANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (162)
Q Consensus 78 ~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~ 148 (162)
+ ..+.+|+||+++|++.+.+. ...+|++.++.++++.++++
T Consensus 247 ---~---------------~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~ 287 (397)
T 3hdq_A 247 ---A---------------DFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTE 287 (397)
T ss_dssp ---T---------------TTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSS
T ss_pred ---c---------------ccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccc
Confidence 1 12358999999999876321 23345555677777777744
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.76 E-value=2.1e-06 Score=71.23 Aligned_cols=88 Identities=9% Similarity=-0.022 Sum_probs=60.8
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHH--Hhcccccee-eEeCCCCcccchHHHHHHHHHcCcEEEcCceee-EEEec
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALF--ATKTEASLL-RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCR-EILYD 76 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~--~~~~~~~~~-~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~-~I~~~ 76 (162)
+|+|++.+..+.+|+++|+.++..+...+ ..+--...+ ++++||+ +.++++|++ +.|++|++|++|+ +|
T Consensus 151 ~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~---~~g~~I~l~~~V~~~i--- 223 (384)
T 2bi7_A 151 FFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY-TQMIKSILN---HENIKVDLQREFIVEE--- 223 (384)
T ss_dssp HTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH-HHHHHHHHC---STTEEEEESCCCCGGG---
T ss_pred HHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCH-HHHHHHHHh---cCCCEEEECCeeehhh---
Confidence 47899999999999999998752111111 111011233 4888887 447777765 4789999999998 65
Q ss_pred cCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhc
Q 031284 77 KAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL 116 (162)
Q Consensus 77 ~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~L 116 (162)
. + .+|+||+|+|++.+.++
T Consensus 224 ----~--~---------------~~d~VI~a~p~~~~~~~ 242 (384)
T 2bi7_A 224 ----R--T---------------HYDHVFYSGPLDAFYGY 242 (384)
T ss_dssp ----G--G---------------GSSEEEECSCHHHHTTT
T ss_pred ----h--c---------------cCCEEEEcCCHHHHHHh
Confidence 1 1 29999999999987664
No 33
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.70 E-value=3.9e-07 Score=75.85 Aligned_cols=113 Identities=7% Similarity=-0.168 Sum_probs=72.9
Q ss_pred ChhhHHhHhCCCCCccccHHHHHHHHHHHHh-ccc-ccee-eEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEecc
Q 031284 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT-KTE-ASLL-RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (162)
Q Consensus 1 ~w~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~-~~~-~~~~-~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~ 77 (162)
+|+|++.+..+.+|+++|+.++..+...+.. .+. ...+ ++++|++ +.|+++|++ +.|++|++|++|++|. .
T Consensus 157 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~---~~g~~I~l~~~V~~I~--~ 230 (399)
T 1v0j_A 157 FVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGY-TAWLQNMAA---DHRIEVRLNTDWFDVR--G 230 (399)
T ss_dssp HTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHH-HHHHHHHTC---STTEEEECSCCHHHHH--H
T ss_pred HHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccH-HHHHHHHHh---cCCeEEEECCchhhhh--h
Confidence 4788998889999999999876211111111 111 1134 4788887 446777665 5789999999999882 1
Q ss_pred CCCCcceEEEEEEEecCCceEE-eCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCcc
Q 031284 78 AANAETYVKGLAMSKATDKKVV-QADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (162)
Q Consensus 78 ~~~~~~~v~gv~~~~~~~g~~~-~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~ 148 (162)
. | . .+ +||+||+|+|++.+.++. +.++++.++.++.+.+|++
T Consensus 231 ------~---v--~------~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 231 ------Q---L--R------PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp ------H---H--T------TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSS
T ss_pred ------h---h--h------hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEEEccc
Confidence 2 1 1 23 699999999999876552 2234444455666666654
No 34
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.66 E-value=0.00011 Score=60.79 Aligned_cols=58 Identities=21% Similarity=0.149 Sum_probs=50.3
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+..+.+.+.+.++++|++++++++|++|..++ + ++.+|++. +|+.++||.||.++..
T Consensus 192 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~~v~l~---dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 192 AGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG---T--KVTGVRMQ---DGSVIPADIVIVGIGI 249 (415)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS---S--BEEEEEES---SSCEEECSEEEECSCC
T ss_pred cCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC---C--cEEEEEeC---CCCEEEcCEEEECCCC
Confidence 345678889999999999999999999998875 5 68888887 7889999999999975
No 35
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.64 E-value=0.00012 Score=60.61 Aligned_cols=58 Identities=22% Similarity=0.246 Sum_probs=50.3
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+...+.+.+.+.++++|++++++++|++|..++ + ++.+|++. +|+.++||.||.++..
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~~V~~~---dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAEG---D--RVTGVVLS---DGNTLPCDLVVVGVGV 239 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TSCEEECSEEEECCCE
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEecC---C--cEEEEEeC---CCCEEEcCEEEECcCC
Confidence 445678889999999999999999999998875 5 78888876 7889999999999975
No 36
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.49 E-value=0.00027 Score=63.44 Aligned_cols=76 Identities=11% Similarity=-0.019 Sum_probs=51.9
Q ss_pred cceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceee--EEEeccCCCCcc-eEEEEEEEecCCce--EEeCCEEEEcCC
Q 031284 35 ASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCR--EILYDKAANAET-YVKGLAMSKATDKK--VVQADAYVAACD 109 (162)
Q Consensus 35 ~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~--~I~~~~~~~~~~-~v~gv~~~~~~~g~--~~~aD~VVsa~~ 109 (162)
...+..+.|+. +.|+++|++.+.. |++|+++++|+ +|..+++ +.. ....|.+..+.+|+ .+.||+||+++|
T Consensus 336 ~~~~~~i~GG~-~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~--g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP 411 (721)
T 3ayj_A 336 SNEYTLPVTEN-VEFIRNLFLKAQN-VGAGKLVVQVRQERVANACH--SGTASARAQLLSYDSHNAVHSEAYDFVILAVP 411 (721)
T ss_dssp TCEECCSSSST-HHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEE--CSSSSCCEEEEEEETTCCEEEEEESEEEECSC
T ss_pred ccceeEECCcH-HHHHHHHHHhccc-CCceEeCCEEEeeeEEECCC--CCccccceEEEEEecCCceEEEEcCEEEECCC
Confidence 34455566666 4699999998764 78899999999 9988653 200 00123332222565 789999999999
Q ss_pred hhHHh
Q 031284 110 VPGIK 114 (162)
Q Consensus 110 ~~~~~ 114 (162)
+..+.
T Consensus 412 ~~~L~ 416 (721)
T 3ayj_A 412 HDQLT 416 (721)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98774
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.42 E-value=0.00028 Score=56.31 Aligned_cols=58 Identities=7% Similarity=-0.048 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~~ 112 (162)
..+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +| ..++||.||.|+....
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~---~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPE--G---GFELDFG---GAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT--S---SEEEEEC---TTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC--c---eEEEEEC---CCceeEEEeCEEEECCCcch
Confidence 36788999999999999999999999998863 3 3346554 45 4899999999998763
No 38
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.38 E-value=0.00045 Score=55.91 Aligned_cols=57 Identities=11% Similarity=0.145 Sum_probs=47.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+.+.+.+.+++.|++|+++++|++|..++ + ++.+|++. +| .++||.||.|+....
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~v~gv~~~---~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIEN---N--EIKGVKTN---KG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEEEEEET---TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEEC---C--EEEEEEEC---Cc-EEECCEEEECcchhH
Confidence 3567889999999999999999999999876 4 67777654 45 799999999998753
No 39
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.38 E-value=0.00042 Score=59.19 Aligned_cols=59 Identities=19% Similarity=0.213 Sum_probs=47.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCC-EEEEcCCh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQAD-AYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD-~VVsa~~~ 110 (162)
.+.+.|.+.++++|++|+++++|++|..+++ | +++||++..++....+.|| .||.|+.-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~--g--~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDT--G--RVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT--C--CEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCC--C--cEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 6889999999999999999999999999843 6 8999987642111258997 99998873
No 40
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.36 E-value=0.00047 Score=57.82 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=51.4
Q ss_pred EeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 40 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 40 ~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++.......+.+.|.+.+++.|++|+++++|++|..++ + ++.+|++. +|+.++||.||.|+...
T Consensus 127 ~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~---~--~v~~V~~~---~G~~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 127 FPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN---G--QTKAVILQ---TGEVLETNHVVIAVGGK 190 (447)
T ss_dssp EETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TCCEEECSCEEECCCCS
T ss_pred ECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC---C--cEEEEEEC---CCCEEECCEEEECCCCC
Confidence 34333345788999999999999999999999999875 5 67788765 67679999999998743
No 41
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.35 E-value=0.00029 Score=56.66 Aligned_cols=56 Identities=14% Similarity=-0.043 Sum_probs=46.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+.+.|.+.++++|++|+++++|++|..++ + + .+|++. +| .+.||+||.|+....
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~--~-~~V~t~---~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVD---G--A-WEVRCD---AG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEET---T--E-EEEECS---SE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC---C--e-EEEEeC---CC-EEEcCEEEECCChhH
Confidence 4678899999999999999999999999876 4 4 455544 45 899999999998753
No 42
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.29 E-value=0.00055 Score=59.59 Aligned_cols=57 Identities=16% Similarity=0.304 Sum_probs=49.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.|.+.+++.|++|+++++|++|..++ + ++.+|++. +|+.+.||.||.|....
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~---~--~v~gV~l~---~G~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMED---G--QITGVTLS---NGEEIKSRHVVLAVGHS 276 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESS---S--BEEEEEET---TSCEEECSCEEECCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC---C--EEEEEEEC---CCCEEECCEEEECCCCC
Confidence 4578889999999999999999999999886 5 68888876 78889999999999864
No 43
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.21 E-value=0.00072 Score=54.73 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=51.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH-Hhhc
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRL 116 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~-~~~L 116 (162)
.+.+.|.+.+++.|++|+++++|+++..++ + ++.+|++...+++..++||.||.|...+. +.+.
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~ 167 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN---G--KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRW 167 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC---C--EEEEEEEEECCeEEEEEcCEEEECCCcchHhHHh
Confidence 466888899999999999999999999886 5 78888875443567899999999998763 4443
No 44
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.18 E-value=0.00056 Score=56.66 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+.+.+.+.++++|++++++++|++|..++ ++.+|++. +|+.++||.||.++..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~---dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG------QLEQVMAS---DGRSFVADSALICVGA 239 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS------SCCEEEET---TSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC------cEEEEEEC---CCCEEEcCEEEEeeCC
Confidence 4567888999999999999999999997653 45678776 7889999999999985
No 45
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.14 E-value=0.00081 Score=54.64 Aligned_cols=56 Identities=11% Similarity=0.069 Sum_probs=47.2
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
.+.+.+.+.+++.|++++++++|++|..++ + ++.+|++. +| .+.||.||.|+....
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~--~~~~v~~~---~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG---E--KVTGVKTT---RG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEEEEEET---TC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC---C--EEEEEEeC---Cc-eEECCEEEECCchhH
Confidence 578889999999999999999999999875 4 67777654 45 789999999998653
No 46
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.10 E-value=0.0018 Score=54.43 Aligned_cols=58 Identities=19% Similarity=0.158 Sum_probs=47.8
Q ss_pred CCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 44 SPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 44 ~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+..+.+.+.+.+++.|++++++++|++|..++ + ++. +++. +|+.+++|.||.++..
T Consensus 199 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~-v~~~---~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 199 FTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN---G--KVA-RVIT---DKRTLDADLVILAAGV 256 (472)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEE-EEEE---SSCEEECSEEEECSCE
T ss_pred ccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC---C--eEE-EEEe---CCCEEEcCEEEECCCC
Confidence 3445678899999999999999999999998754 4 454 5565 6889999999999985
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.08 E-value=0.00087 Score=55.68 Aligned_cols=56 Identities=14% Similarity=0.088 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEe---------------ccCCCCcceEEEEEEEecCCceEE--eCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILY---------------DKAANAETYVKGLAMSKATDKKVV--QADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~---------------~~~~~~~~~v~gv~~~~~~~g~~~--~aD~VVsa~~~ 110 (162)
.+.+.+.+.+++.|++|+++++|++|.. ++ + ++.+|++. +| .+ .||.||.|+..
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~---~--~v~~V~t~---~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE---A--RASAAVLS---DG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC---E--EEEEEEET---TS-CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC---C--ceEEEEeC---CC-EEeecCCEEEECCCc
Confidence 6888999999999999999999999988 44 4 56677654 55 67 99999999987
Q ss_pred hH
Q 031284 111 PG 112 (162)
Q Consensus 111 ~~ 112 (162)
.+
T Consensus 253 ~s 254 (448)
T 3axb_A 253 WS 254 (448)
T ss_dssp GH
T ss_pred CH
Confidence 53
No 48
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.04 E-value=0.0015 Score=54.59 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=47.9
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEe--ccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILY--DKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~--~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.+++.|++++++++|++|.. ++ + ++.+|++. +|+.+++|.||.++..
T Consensus 189 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~---~--~v~~v~~~---~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 189 TAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ---Q--KVTAVLCE---DGTRLPADLVIAGIGL 248 (431)
T ss_dssp SCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT---C--CEEEEEET---TSCEEECSEEEECCCE
T ss_pred hhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC---C--cEEEEEeC---CCCEEEcCEEEECCCC
Confidence 3345778889999999999999999999986 43 4 57777776 7889999999999874
No 49
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.04 E-value=0.0017 Score=56.32 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=52.3
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCChhH--HhhcC
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVPG--IKRLL 117 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~~~--~~~Ll 117 (162)
..+...+++.++++|++|+++++|++|..++ + ++++|++.. ++.+..+.||.||.|+.+.+ +.+++
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~---g--~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQ---G--KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC---C--eEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc
Confidence 4678889999999999999999999999986 5 788888762 11235789999999998763 44444
No 50
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.02 E-value=0.0012 Score=58.12 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=47.4
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+...+.+.++++|++|+++++|++|..++ + ++ .|++. +|+.+.||.||.|+....
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~--~v-~V~t~---~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD---D--CW-LLNFA---GDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET---T--EE-EEEET---TSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC---C--eE-EEEEC---CCCEEECCEEEECCCcch
Confidence 4678899999999999999999999999886 4 43 55554 567899999999998763
No 51
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.02 E-value=0.0025 Score=50.04 Aligned_cols=60 Identities=12% Similarity=0.109 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEec---CCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA---TDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~---~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|++++++++|++|..++ + ++.+|++... ++++.+++|.||.+++..
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ---M--GVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS---S--SEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC---C--ceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 3466777888888999999999999998775 4 6778877621 223679999999999854
No 52
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.99 E-value=0.0022 Score=55.37 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=48.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
..+.+.|.+.+++.|++|+++++|++|..+++ + ++.||++.. .+|+ .+.||.||.|+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~--g--~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK--G--TVKGILVKG-MYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT--S--CEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC--C--eEEEEEEEe-CCCcEEEEECCeEEEeCCC
Confidence 46888999999999999999999999998753 5 788887753 1354 6899999999874
No 53
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.94 E-value=0.0018 Score=58.53 Aligned_cols=56 Identities=20% Similarity=0.149 Sum_probs=47.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
.+.+.+.+.++++|++|+++++|++|..++ + ++.+|++. +| .++||.||.|+....
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~---~--~v~~V~t~---~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG---G--RVTGVQTA---DG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC---C--EEEEEEEC---Cc-EEECCEEEECCccch
Confidence 578899999999999999999999999876 4 67777654 45 799999999998764
No 54
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.90 E-value=0.0027 Score=55.02 Aligned_cols=59 Identities=22% Similarity=0.234 Sum_probs=47.4
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
..+.+.|.+.+++.|++|+++++|++|..+++ + +++||++.. .+|+ .+.||.||.|+.-
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~--g--~v~GV~~~~-~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS--G--KVTGVLVKG-EYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----C--CEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC--C--eEEEEEEEe-CCCcEEEEEcCEEEEeCCC
Confidence 46788999999999999999999999988752 5 788987753 1353 6899999999873
No 55
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.89 E-value=0.0013 Score=53.05 Aligned_cols=55 Identities=15% Similarity=0.003 Sum_probs=45.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|++++++++|++|..++ + ++ +|++. +| .+.||.||.|+...
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~--~~-~v~~~---~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG---E--AL-FIKTP---SG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS---S--SE-EEEET---TE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC---C--EE-EEEcC---Cc-eEEcCEEEECCChh
Confidence 4578899999999999999999999998876 4 45 66544 45 79999999999875
No 56
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.88 E-value=0.0031 Score=54.76 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=48.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+...+.+.++++|++|+.+++|++|..++ + ++++|++.. ++.+..+.||.||.|+.+.+
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~---~--~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG---D--QIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeC---C--EEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 3577888899999999999999999999886 5 788887642 21233789999999998763
No 57
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.84 E-value=0.0027 Score=54.30 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=46.1
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce-EEeCCEEEEcCCh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDV 110 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~-~~~aD~VVsa~~~ 110 (162)
+..+.+.+.+.++++|++++++++|++|..+++ + ++.++.+..+ +|+ .++||.||.++..
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~--~--~v~~~~v~~~-~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN--G--RVQAVVAMTP-NGEMRIETDFVFLGLGE 314 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT--S--BEEEEEEEET-TEEEEEECSCEEECCCC
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC--C--ceEEEEEEEC-CCcEEEEcCEEEECcCC
Confidence 456788899999999999999999999987543 4 5533333221 676 8999999999974
No 58
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.84 E-value=0.003 Score=54.53 Aligned_cols=59 Identities=15% Similarity=0.148 Sum_probs=48.4
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
..+.+.|.+.+++.|++|+++++|++|..+++ + ++.||++.. .+|+ .+.||.||.|+.-
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~--g--~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD--H--SVVGAVVHG-KHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTT--S--BEEEEEEEE-TTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC--C--cEEEEEEEe-CCCcEEEEEcCEEEEecCC
Confidence 45788999999999999999999999998762 5 788887753 2454 6899999999874
No 59
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.83 E-value=0.002 Score=56.98 Aligned_cols=57 Identities=9% Similarity=0.030 Sum_probs=46.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce-EEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~-~~~aD~VVsa~~~~~ 112 (162)
..+.+.+.+.+++.|++|+++++|++|..++ + ++ .|++. +|+ .+.||.||.|+....
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~--~v-~V~t~---~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID---S--QW-QLTFG---QSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS---S--SE-EEEEC----CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC---C--eE-EEEeC---CCcEEEECCEEEECCCcch
Confidence 3678899999999999999999999999986 4 43 55554 566 799999999998763
No 60
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.79 E-value=0.0018 Score=54.08 Aligned_cols=58 Identities=12% Similarity=0.033 Sum_probs=46.7
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++++++++|++|..++ + ++..+.+ +|+.+++|.||.++...
T Consensus 189 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~--~v~~v~~----~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 189 FDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD---D--EIITKTL----DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET---T--EEEEEET----TSCEEEESEEEECCCEE
T ss_pred hhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC---C--eEEEEEe----CCCEEECCEEEECcCCC
Confidence 445678889999999999999999999998644 4 5655542 57789999999999853
No 61
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.79 E-value=0.0026 Score=54.08 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=47.4
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++++++++|++|..+++ + ...+++. +|+.+++|.||.++...
T Consensus 233 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---~~~v~~~---~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 233 FDETIREEVTKQLTANGIEIMTNENPAKVSLNTD--G---SKHVTFE---SGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--c---eEEEEEC---CCcEEEcCEEEECCCCc
Confidence 3456788899999999999999999999987642 3 3456555 67789999999999753
No 62
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.75 E-value=0.0061 Score=50.90 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=51.3
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChhH-HhhcCC
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG-IKRLLP 118 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~~-~~~Ll~ 118 (162)
.+.+.|.+.+++.|++|+++++|+++..++ + ++.+|++...++|+ .++||.||.|...+. +.+.+.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~---~--~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED---G--YVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET---T--EEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC---C--EEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 467888888889999999999999998876 5 67788765321354 789999999998764 554544
No 63
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.74 E-value=0.0029 Score=52.90 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=46.4
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.+++.|++++++++|++|..++ + ++ .+.+. +| .+++|.||.++...
T Consensus 187 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v-~v~~~---~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 187 FDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA---N--GI-VLETS---EQ-EISCDSGIFALNLH 243 (452)
T ss_dssp CCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS---S--CE-EEEES---SC-EEEESEEEECSCCB
T ss_pred CCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC---C--eE-EEEEC---CC-EEEeCEEEECcCCC
Confidence 456788899999999999999999999998665 4 45 56554 44 89999999999854
No 64
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.74 E-value=0.0032 Score=50.52 Aligned_cols=55 Identities=13% Similarity=0.000 Sum_probs=44.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
.+.+.+.+.+++.|++++.+++|++|..++ + .+ .+++. +| .+.||.||.|+....
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~--~~-~v~~~---~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD---D--GV-TIETA---DG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS---S--SE-EEEES---SC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC---C--EE-EEEEC---CC-eEEcCEEEEcCCccH
Confidence 578899999999999999999999999876 3 33 45443 45 589999999999764
No 65
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.73 E-value=0.0031 Score=53.58 Aligned_cols=57 Identities=18% Similarity=0.145 Sum_probs=46.5
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.++++|++++++++|++|..++ + ++ .+++. +|+.++||.||.++..
T Consensus 224 l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~---~--~~-~v~l~---dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 224 LPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS---G--KL-LIKLK---DGRKVETDHIVAAVGL 280 (493)
T ss_dssp SCHHHHHHHHHHHHTTTCEEECSCCEEEEEEET---T--EE-EEEET---TSCEEEESEEEECCCE
T ss_pred CCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC---C--eE-EEEEC---CCCEEECCEEEECCCC
Confidence 345577888999999999999999999998764 3 33 56665 7889999999999874
No 66
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.003 Score=53.38 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=46.9
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc-eEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g-~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.+++.|++++++++|++|..+++ + ++..+++. +| +.+++|.||.++..
T Consensus 224 ~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~~~~v~~~---~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 224 FDECIQNTITDHYVKEGINVHKLSKIVKVEKNVE--T--DKLKIHMN---DSKSIDDVDELIWTIGR 283 (479)
T ss_dssp SCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC---C--CCEEEEET---TSCEEEEESEEEECSCE
T ss_pred cCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC--C--cEEEEEEC---CCcEEEEcCEEEECCCC
Confidence 3456788899999999999999999999987642 3 24456655 67 78999999999984
No 67
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.72 E-value=0.003 Score=53.63 Aligned_cols=59 Identities=8% Similarity=0.032 Sum_probs=47.3
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++|+++++|++|..+++ + ...+++. +|+.+++|.||.++...
T Consensus 229 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---~~~v~~~---~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 229 FDSELRKQLTEQLRANGINVRTHENPAKVTKNAD--G---TRHVVFE---SGAEADYDVVMLAIGRV 287 (490)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--C---EEEEEEC---CCcEEEcCEEEEccCCC
Confidence 3456788899999999999999999999987652 3 2356555 67789999999999853
No 68
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.71 E-value=0.0033 Score=53.09 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=47.2
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
...+.+.+.+.+++.|++++++++|++|..++ + ++ .+++. +|+.+++|.||.++...
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~---~--~v-~v~~~---~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE---N--CY-NVVLT---NGQTICADRVMLATGRV 287 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS---S--SE-EEEET---TSCEEEESEEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC---C--EE-EEEEC---CCcEEEcCEEEEeeCCC
Confidence 45678899999999999999999999998875 3 33 56555 67889999999999853
No 69
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.70 E-value=0.0035 Score=51.18 Aligned_cols=56 Identities=20% Similarity=0.159 Sum_probs=45.9
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+..+.+.+.+.+++.|++++++++|++|..++ + . ..+++. +|+.+++|.||.++..
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~---~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG---E--G-LEAHLS---DGEVIPCDLVVSAVGL 241 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET---T--E-EEEEET---TSCEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC---C--E-EEEEEC---CCCEEECCEEEECcCC
Confidence 45678899999999999999999999998764 2 2 355554 6888999999999974
No 70
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.68 E-value=0.0035 Score=47.78 Aligned_cols=55 Identities=9% Similarity=0.044 Sum_probs=45.9
Q ss_pred cchHHHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+++. |++++ +++|++|..++ + ++.+|++. +|+.++||.||.+....
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~---~--~v~~v~~~---~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG---N--RVVGVRTW---EGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---T--EEEEEEET---TSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC---C--EEEEEEEC---CCCEEECCEEEECCCCC
Confidence 5778888999997 99999 68999998876 4 67777765 67789999999999874
No 71
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.64 E-value=0.0062 Score=47.86 Aligned_cols=57 Identities=11% Similarity=0.009 Sum_probs=44.8
Q ss_pred hHHHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCChh
Q 031284 50 SGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 50 ~~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+. |++++++++|++|..++ + ++.+|++.. ++.++.+++|.||.++...
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~---~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDG---K--LLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESS---S--SEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEccc---C--cEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 56777788776 99999999999998876 4 577888763 1124679999999999854
No 72
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.64 E-value=0.0032 Score=52.84 Aligned_cols=58 Identities=16% Similarity=0.064 Sum_probs=46.7
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEE-EEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA-MSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~-~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++++++++|++|..+++ + ...|+ +. +|+ +++|.||.++...
T Consensus 209 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~~---~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 209 FDQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD--G---RRVATTMK---HGE-IVADQVMLALGRM 267 (463)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT--S---CEEEEESS---SCE-EEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC--C---EEEEEEcC---CCe-EEeCEEEEeeCcc
Confidence 3456788999999999999999999999988753 3 33565 44 677 9999999999853
No 73
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.59 E-value=0.0051 Score=52.12 Aligned_cols=58 Identities=14% Similarity=0.118 Sum_probs=46.5
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++|+++++|++|..++ + ++ .+++. +|+.+++|.||.++...
T Consensus 221 ~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~---~--~v-~v~~~---~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 221 EDADAALVLEESFAERGVRLFKNARAASVTRTG---A--GV-LVTMT---DGRTVEGSHALMTIGSV 278 (499)
T ss_dssp SSHHHHHHHHHHHHHTTCEEETTCCEEEEEECS---S--SE-EEEET---TSCEEEESEEEECCCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--EE-EEEEC---CCcEEEcCEEEECCCCC
Confidence 445678899999999999999999999998765 3 33 34433 67789999999999854
No 74
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.54 E-value=0.0053 Score=49.47 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+.+.+.+.++++|++++++++|++|..++ + .+ .+++. +..++||.||.|+....
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~~-~v~~~----~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISP---D--SV-KIETA----NGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS---S--CE-EEEET----TEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecC---C--eE-EEEeC----CCEEEeCEEEEecCccH
Confidence 3678899999999999999999999999875 3 33 34433 34799999999999753
No 75
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.53 E-value=0.0066 Score=51.58 Aligned_cols=60 Identities=17% Similarity=0.006 Sum_probs=47.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~~ 112 (162)
..+...+.+.++++|++|+++++|++|..++ ++.+|++....+|+ .+.||.||.|+.+.+
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 3578899999999999999999999998874 46677664212354 789999999998764
No 76
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.53 E-value=0.0075 Score=52.59 Aligned_cols=61 Identities=13% Similarity=0.066 Sum_probs=48.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
..+.+.|.+.+++.|++|+++++|++|..+++ + ++.||.+....+|+ .+.||.||.|+.-.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~--g--~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQD--G--AVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT--S--CEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC--C--EEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 35778899999999999999999999998632 6 78898764222454 68999999998753
No 77
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.49 E-value=0.006 Score=49.83 Aligned_cols=64 Identities=13% Similarity=0.139 Sum_probs=48.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh-HHhhcCC
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP-GIKRLLP 118 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~-~~~~Ll~ 118 (162)
.+.+.|.+.+++.|++|+++++|++|..+++ + ....+... +|+ .++||.||.|.... .+.+++.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~--~~v~v~~~---~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGT--D--SVTTIEDI---NGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETT--E--EEEEEEET---TSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--E--EEEEEEcC---CCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 5677888899999999999999999998763 3 22233333 566 69999999999876 3555554
No 78
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.48 E-value=0.0072 Score=51.41 Aligned_cols=64 Identities=13% Similarity=0.174 Sum_probs=50.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChhH-HhhcC
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~~-~~~Ll 117 (162)
.+.+.|.+.+++.|++|+++++|++|..++ + ++.+|++... +| ..++||.||.|...+. +.+.+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~---~--~v~gv~~~~~-dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG---E--RAVGVRYRNT-EGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET---T--EEEEEEEECS-SSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC---C--EEEEEEEEeC-CCCEEEEEcCEEEECCCcchHHHHHc
Confidence 467788888999999999999999999876 5 7888877522 45 3799999999998863 44444
No 79
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.48 E-value=0.0056 Score=49.75 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=43.2
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+++.|++|+++++|++|..++ + .+ .|.+. +..++||.||.|+...
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~--~v-~v~t~----~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA---D--GV-SVTTD----RGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET---T--EE-EEEES----SCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC---C--eE-EEEEC----CCEEEcCEEEEcCCcC
Confidence 577889999999999999999999998875 3 33 24332 3479999999999865
No 80
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.46 E-value=0.0056 Score=51.25 Aligned_cols=58 Identities=14% Similarity=0.167 Sum_probs=46.3
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.++++|++++++++|++|..+++ + ...+++. +|+.+++|.||.++..
T Consensus 206 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~---~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 206 FDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD--G---SLTLELE---DGRSETVDCLIWAIGR 263 (450)
T ss_dssp SCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCE
T ss_pred hhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--c---EEEEEEC---CCcEEEcCEEEECCCC
Confidence 3456788899999999999999999999987642 3 2355555 6778999999999874
No 81
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.46 E-value=0.008 Score=50.84 Aligned_cols=58 Identities=14% Similarity=0.302 Sum_probs=47.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+.+.|.+.+++.|++++.+ +|++|..+++ + .+.+|++. +|+.++||.||.|...+.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~--~--~~~~v~~~---~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDER--G--WISGVHTK---QHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT--S--CEEEEEES---SSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC--C--CEEEEEEC---CCCEEEcCEEEECCCcch
Confidence 357788888899999999999 9999988653 5 56777765 677899999999998864
No 82
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.45 E-value=0.0065 Score=52.25 Aligned_cols=57 Identities=19% Similarity=0.355 Sum_probs=47.9
Q ss_pred cchHHHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
.+.+.|.+.+++. |++++++ +|++|..+++ + .+.+|++. +|+.++||.||.|.....
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~--g--~~~~v~~~---~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDAN--G--NIESVRTA---TGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT--S--CEEEEEET---TSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC--C--CEEEEEEC---CCCEEECCEEEECCCCch
Confidence 5788899999998 9999999 9999988653 5 56777765 677899999999998764
No 83
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.41 E-value=0.0055 Score=49.91 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=49.3
Q ss_pred cchHHHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEE-EEEEEecCCceEEeCCEEEEcCChh-HHhhcCC
Q 031284 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVK-GLAMSKATDKKVVQADAYVAACDVP-GIKRLLP 118 (162)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~-gv~~~~~~~g~~~~aD~VVsa~~~~-~~~~Ll~ 118 (162)
.+.+.|.+.+++. |++|+++++|++|..++ + +++ .+++. +|+.++||.||.|...+ .+.+.+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~g~v~~~---~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE---R--HAIDQVRLN---DGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT---T--SCEEEEEET---TSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC---C--ceEEEEEEC---CCCEEECCEEEECCCCChHHHHHhC
Confidence 5677888888888 99999999999998876 3 443 45554 67789999999999876 3555554
No 84
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.35 E-value=0.012 Score=52.18 Aligned_cols=59 Identities=8% Similarity=-0.039 Sum_probs=47.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
.+...|.+.+++.|++|+.+++|.+|..++ | ++.|+.+....+|+ .+.||.||.|+.-.
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD---G--KCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET---T--EEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC---C--EEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 577889999999999999999999999875 6 78898764222455 58999999998743
No 85
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.35 E-value=0.014 Score=45.79 Aligned_cols=57 Identities=14% Similarity=0.169 Sum_probs=44.1
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+++.|++++++++|++|..++ + ++.++++....+|+ .+++|.||.++...
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVGDG---K--KVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEESS---S--SEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEecCC---c--eEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 4667888889999999999999998764 4 57788775311343 68999999998753
No 86
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.34 E-value=0.011 Score=45.86 Aligned_cols=55 Identities=13% Similarity=0.102 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
+.+.+.+++.|++++++++|.+|..++ + ++.++++. ..+|+ .+++|.||.++...
T Consensus 187 ~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 187 STVEKVKKNEKIELITSASVDEVYGDK---M--GVAGVKVK-LKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHHHCTTEEEECSCEEEEEEEET---T--EEEEEEEE-CTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHHHhcCCeEEEeCcEEEEEEcCC---C--cEEEEEEE-cCCCCeEEeecCeEEEEEcCC
Confidence 344555678999999999999998775 5 67788775 22454 78999999999853
No 87
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=96.33 E-value=0.011 Score=51.48 Aligned_cols=60 Identities=20% Similarity=0.198 Sum_probs=47.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe---cCC---------ceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATD---------KKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~---~~~---------g~~~~aD~VVsa~~~~ 111 (162)
.+.+.|.+.+++.|++|+++++|++|..+++ + ++.+|++.. +.+ |..++||.||.|...+
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~--g--~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED--G--SVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT--S--SEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC--C--CEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 4677888999999999999999999998763 6 677887641 012 3579999999999876
No 88
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.32 E-value=0.0083 Score=50.95 Aligned_cols=59 Identities=10% Similarity=-0.004 Sum_probs=46.8
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceE-EeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKV-VQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~-~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++++++++|++|..+++ + . ..+++. +|+. +++|.||.++...
T Consensus 215 ~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~--~-~~v~~~---~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 215 FDESVINVLENDMKKNNINIVTFADVVEIKKVSD--K--N-LSIHLS---DGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESST--T--C-EEEEET---TSCEEEEESEEEECCCBC
T ss_pred cchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC--c--e-EEEEEC---CCcEEEECCEEEECCCCC
Confidence 3456788899999999999999999999987642 3 2 345554 6777 9999999999854
No 89
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.29 E-value=0.0061 Score=50.94 Aligned_cols=56 Identities=14% Similarity=0.057 Sum_probs=45.5
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
...+.+.+.+.+++.|++|+++++|++|..++ + . ..|.+. +| .++||.||.|....
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~---~--~-~~V~~~---~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTA---S--G-FRVTTS---AG-TVDAASLVVASGGK 186 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEET---T--E-EEEEET---TE-EEEESEEEECCCCS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC---C--E-EEEEEC---Cc-EEEeeEEEECCCCc
Confidence 34688999999999999999999999998876 3 3 345443 45 89999999998854
No 90
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.28 E-value=0.0087 Score=49.98 Aligned_cols=57 Identities=12% Similarity=0.154 Sum_probs=45.6
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
...+.+.+.+.++++|++++++++|++|..++ + . ..+++. +|+.+++|.||.++...
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~---~--~-v~v~~~---~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA---K--G-ARVELE---GGEVLEADRVLVAVGRR 263 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEET---T--E-EEEEET---TSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC---C--E-EEEEEC---CCeEEEcCEEEECcCCC
Confidence 34678889999999999999999999998765 3 2 234443 67789999999999754
No 91
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.20 E-value=0.012 Score=49.45 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=45.7
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce-EEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~-~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.++++|++++++++|++|..++ + . ..+++. +|+ .+++|.||.++..
T Consensus 205 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~---~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 205 FDPLLSATLAENMHAQGIETHLEFAVAALERDA---Q--G-TTLVAQ---DGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp SCHHHHHHHHHHHHHTTCEEESSCCEEEEEEET---T--E-EEEEET---TCCEEEEESEEEECSCE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--e-EEEEEe---CCcEEEEcCEEEECCCC
Confidence 345677889999999999999999999998764 2 3 345554 677 8999999999874
No 92
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.18 E-value=0.01 Score=42.97 Aligned_cols=54 Identities=7% Similarity=-0.031 Sum_probs=43.4
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|++++++ +|++|..++ + . ..+++. +| .+++|.||.+....
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~---~--~-~~v~~~---~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMG---G--V-FEVETE---EG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECS---S--S-EEEECS---SC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC---C--E-EEEEEC---CC-EEEECEEEECCCCC
Confidence 567888999999999999999 999998875 2 2 244443 56 89999999999864
No 93
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.14 E-value=0.025 Score=44.57 Aligned_cols=58 Identities=10% Similarity=-0.012 Sum_probs=44.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
...+.+.+.+++.|++++++++|++|..+ + ++.++++....+| +.+++|.||.++...
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~----~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGD----E--RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEES----S--SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccC----C--CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 35567777788889999999999999874 3 5667776532134 679999999999854
No 94
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.14 E-value=0.012 Score=48.55 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=43.8
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.++++|++++++++|++|. + + +|++. +|+.+++|.||.++..
T Consensus 185 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~----~-----~v~~~---~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 185 APATLADFVARYHAAQGVDLRFERSVTGSV-D----G-----VVLLD---DGTRIAADMVVVGIGV 237 (408)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T----T-----EEEET---TSCEEECSEEEECSCE
T ss_pred cCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C----C-----EEEEC---CCCEEEcCEEEECcCC
Confidence 345577889999999999999999999997 3 3 35555 6889999999999874
No 95
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.13 E-value=0.02 Score=48.00 Aligned_cols=62 Identities=11% Similarity=0.204 Sum_probs=46.4
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++++++++|++|..+++ + .+ .+.+.. +++++.+++|.||.++...
T Consensus 218 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 218 IDMEISKNFQRILQKQGFKFKLNTKVTGATKKSD--G--KI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp CCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTT--S--CE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCC--c--eE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 3456778899999999999999999999987652 2 12 343321 2356789999999998743
No 96
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.13 E-value=0.012 Score=50.89 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=45.5
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.+++.|++++++++|++|..++ + +|++. +|+.+++|.||.++..
T Consensus 226 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~-----~v~~~---~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 226 IDYEMAAYVHEHMKNHDVELVFEDGVDALEENG---A-----VVRLK---SGSVIQTDMLILAIGV 280 (588)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG---T-----EEEET---TSCEEECSEEEECSCE
T ss_pred CCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC---C-----EEEEC---CCCEEEcCEEEEccCC
Confidence 345678889999999999999999999997654 2 35565 6889999999999984
No 97
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.12 E-value=0.013 Score=51.51 Aligned_cols=59 Identities=12% Similarity=0.065 Sum_probs=48.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
.+...|.+.+++.|++|+.+++|++|..++ + ++.||.+....+|+ .+.||.||.|+.-.
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMEN---G--ECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEEC---C--EEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 577889999999999999999999999875 6 78898764212454 68999999998753
No 98
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.10 E-value=0.011 Score=50.63 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=42.8
Q ss_pred CCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc----eEEeCCEEEEcCCh
Q 031284 44 SPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK----KVVQADAYVAACDV 110 (162)
Q Consensus 44 ~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g----~~~~aD~VVsa~~~ 110 (162)
.+++.+.+.+.+.|+++|++|++|++|+++.-+ + ........ +| +.+++|.||.++..
T Consensus 269 ~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~----~--~~~~~~~~---dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 269 MFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK----Q--LLAKTKHE---DGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS----E--EEEEEECT---TSCEEEEEEECSEEEECCCE
T ss_pred CCCHHHHHHHHHHHHhcceeeecCceEEEEeCC----c--eEEEEEec---CcccceeeeccCEEEEccCC
Confidence 356788899999999999999999999998433 2 12222211 33 46999999998863
No 99
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.08 E-value=0.01 Score=50.14 Aligned_cols=56 Identities=18% Similarity=0.203 Sum_probs=45.1
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.+++.|++++++++|++|..+ + ++..+.+ +|+.+++|.||.++..
T Consensus 234 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~----~--~v~~v~~----~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 234 YDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN----G--KVEKIIT----DKNEYDVDMVILAVGF 289 (490)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEETCCEEEEECS----S--SCCEEEE----SSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC----C--cEEEEEE----CCcEEECCEEEECCCC
Confidence 44567788999999999999999999999753 4 4555654 4778999999999974
No 100
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=96.07 E-value=0.021 Score=47.88 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=46.1
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc-eEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g-~~~~aD~VVsa~~~~ 111 (162)
.+..+.+.+.+.+++.|++++++++|++|..++ + .+ .+++. +++| +.+++|.||.++...
T Consensus 219 ~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~---~--~~-~v~~~-~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 219 VDEQVAKEAQKILTKQGLKILLGARVTGTEVKN---K--QV-TVKFV-DAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEETCEEEEEEECS---S--CE-EEEEE-SSSEEEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC---C--EE-EEEEE-eCCCcEEEECCEEEEeeCCc
Confidence 345678889999999999999999999998775 3 33 34454 1123 678999999999854
No 101
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.06 E-value=0.014 Score=48.88 Aligned_cols=56 Identities=11% Similarity=0.036 Sum_probs=44.7
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+..+.+.+.+.++++|++++++++|++|..++ + ...+.+. ++.+++|.||.++...
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~---~~~v~~~----~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD---G---EFVLTTT----HGELRADKLLVATGRT 270 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET---T---EEEEEET----TEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC---C---EEEEEEC----CcEEEcCEEEECCCCC
Confidence 45678889999999999999999999998764 3 2345443 5689999999998754
No 102
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.01 E-value=0.0088 Score=49.05 Aligned_cols=52 Identities=10% Similarity=0.069 Sum_probs=43.1
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+..+.+.+.+.+++.|++++++++|++|. + + +|+++ +|+++++|.||.+++.
T Consensus 217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~--~---~-----~v~~~---~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 217 SPNSRKAVASIYNQLGIKLVHNFKIKEIR--E---H-----EIVDE---KGNTIPADITILLPPY 268 (409)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEC--S---S-----EEEET---TSCEEECSEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCceEEEC--C---C-----eEEEC---CCCEEeeeEEEECCCC
Confidence 45678889999999999999999999984 3 2 25565 7889999999999874
No 103
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.01 E-value=0.016 Score=49.23 Aligned_cols=63 Identities=10% Similarity=0.031 Sum_probs=48.5
Q ss_pred cceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 35 ASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 35 ~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+..+-+.+++.. ++.+.++++|++|+++++|++|.-++ ++.++++. +|+.+++|.||.++...
T Consensus 250 ~~~vvViGgG~~-----gle~~l~~~GV~v~~~~~v~~i~~~~------~v~~v~~~---~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 250 GRKVAVTGSKAD-----EVIQELERWGIDYVHIPNVKRVEGNE------KVERVIDM---NNHEYKVDALIFADGRR 312 (493)
T ss_dssp CSEEEEESTTHH-----HHHHHHHHHTCEEEECSSEEEEECSS------SCCEEEET---TCCEEECSEEEECCCEE
T ss_pred CCEEEEECCCHH-----HHHHHHHhCCcEEEeCCeeEEEecCC------ceEEEEeC---CCeEEEeCEEEECCCcC
Confidence 456667777652 34488899999999999999997543 45566654 67899999999999853
No 104
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.00 E-value=0.02 Score=47.73 Aligned_cols=61 Identities=13% Similarity=0.078 Sum_probs=45.8
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+..+.+.+.+.++++|++++++++|++|..++ + .+ .+.+..+++++.+++|.||.++...
T Consensus 209 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 209 FEKQMAAIIKKRLKKKGVEVVTNALAKGAEERE---D--GV-TVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEET---T--EE-EEEEEETTEEEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--eE-EEEEEeCCceeEEEcCEEEECcCCC
Confidence 345677889999999999999999999998764 3 32 3444322245689999999999854
No 105
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.98 E-value=0.02 Score=48.21 Aligned_cols=56 Identities=16% Similarity=0.077 Sum_probs=45.0
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+..+.+.+.+.+++.|++++++++|++|..+ + ++..+.+ ++..+++|.||.++...
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~----~--~v~~v~~----~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGN----E--RVEAVET----DKGTYKADLVLVSVGVK 281 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES----S--BEEEEEE----TTEEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC----C--cEEEEEE----CCCEEEcCEEEECcCCC
Confidence 4567788999999999999999999999764 3 4555644 35689999999999853
No 106
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.97 E-value=0.018 Score=46.12 Aligned_cols=58 Identities=10% Similarity=0.038 Sum_probs=45.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+++.|++++++++|++|..++ + ++.+|++.. .+| +.+++|.||.++...
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN---G--VLTRVHLRS-SDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET---T--EEEEEEEEE-TTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC---C--ceEEEEEEe-cCCCeEEEeCCEEEECCCCC
Confidence 456778888889999999999999998775 5 677777642 245 679999999998753
No 107
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=95.96 E-value=0.017 Score=49.31 Aligned_cols=58 Identities=10% Similarity=0.352 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+.+.|.+.+++.|++++.+ +|++|..+++ + .+.+|++. +|+.++||.||.|...+.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~--g--~~~~v~~~---~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNR--G--YISNLLTK---EGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT--S--CEEEEEET---TSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC--C--cEEEEEEC---CCcEEEeCEEEECCCCch
Confidence 357788999999999999999 8999988653 5 56677665 677899999999998864
No 108
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.94 E-value=0.011 Score=49.77 Aligned_cols=61 Identities=11% Similarity=-0.050 Sum_probs=46.1
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-cCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~-~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++++++++|++|..++ + ...+++.. ++.|+.+++|.||.++...
T Consensus 224 ~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~---~---~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 224 ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE---D---GVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp SCHHHHHHHHHHHGGGEEEEECSCEEEEEEEET---T---EEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred cCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC---C---eEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 345678889999999999999999999998764 2 23555551 1116678999999999853
No 109
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=95.88 E-value=0.038 Score=42.97 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=42.3
Q ss_pred HHHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCCh
Q 031284 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~ 110 (162)
+.+.+.+++ .|++++++++|++|.-++ + ++.++++....+| ..+++|.||.++..
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGDG---S--KVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEESS---S--SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcCC---C--cEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 567777887 699999999999998764 4 6778877632224 37899999999874
No 110
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.87 E-value=0.021 Score=47.30 Aligned_cols=58 Identities=12% Similarity=0.026 Sum_probs=45.3
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEec----cCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYD----KAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~----~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
....+.+.+.+.+++.|++|+++++|++|..+ + + + ..|.+. +| .++||.||.|+....
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~---~--~-~~v~~~---~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK---V--R-FVLQVN---ST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS---C--C-EEEEET---TE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC---C--e-EEEEEC---CC-EEECCEEEECCCCcc
Confidence 44568899999999999999999999999876 3 3 3 244433 44 799999999997543
No 111
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.85 E-value=0.026 Score=47.26 Aligned_cols=61 Identities=16% Similarity=0.216 Sum_probs=45.9
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEe--ccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILY--DKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~--~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.+++.|++++++++|++|.. ++ ....+++.. +++++.+++|.||.++...
T Consensus 222 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 222 MDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK------NVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT------TEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC------CeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 3455788899999999999999999999987 33 234555531 2235689999999999753
No 112
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.84 E-value=0.016 Score=48.31 Aligned_cols=57 Identities=18% Similarity=0.085 Sum_probs=45.0
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.+++.|++++++++|++|..++ ++..+.+ +++.+++|.||.++...
T Consensus 189 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~------~v~~v~~----~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 189 LDKEFTDVLTEEMEANNITIATGETVERYEGDG------RVQKVVT----DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp CCHHHHHHHHHHHHTTTEEEEESCCEEEEECSS------BCCEEEE----SSCEEECSEEEECSCEE
T ss_pred CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccC------cEEEEEE----CCCEEECCEEEECcCCC
Confidence 345677889999999999999999999997652 4445544 36689999999999853
No 113
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.84 E-value=0.027 Score=47.10 Aligned_cols=61 Identities=16% Similarity=0.113 Sum_probs=45.0
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++++++++|++|.-++ + ++ .+.+..+++++.+++|.||.++...
T Consensus 210 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 210 EDADVSKEIEKQFKKLGVTILTATKVESIADGG---S--QV-TVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp SCHHHHHHHHHHHHHHTCEEECSCEEEEEEECS---S--CE-EEEEESSSCEEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC---C--eE-EEEEEcCCceEEEEcCEEEECCCCC
Confidence 345677889999999999999999999998764 3 22 3444312122679999999998743
No 114
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.82 E-value=0.024 Score=49.50 Aligned_cols=59 Identities=17% Similarity=0.064 Sum_probs=48.0
Q ss_pred cchHHHHHHHHHcC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~G-g~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
.+...|.+.+++.| ++|+++++|++|..++ + ++.|+.+....+|+ .+.||.||.|+...
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDD---G--HVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEET---T--EEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC---C--EEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 57788889989999 9999999999999876 5 78888654222565 68999999999854
No 115
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.81 E-value=0.0043 Score=51.07 Aligned_cols=54 Identities=9% Similarity=0.071 Sum_probs=40.2
Q ss_pred cchHHHHHHHHHcCcEEEcCceee---------EEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCR---------EILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~---------~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.|.+.+++.|++++++++|+ +|..++ + ++ +|++. +| .++||.||.|+...
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~---~--~v-~v~~~---~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN---T--HQ-IVVHE---TR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------------CBC---CE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC---C--eE-EEEEC---Cc-EEECCEEEECCCcc
Confidence 478889999999999999999999 887765 4 44 55443 44 79999999999875
No 116
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.72 E-value=0.021 Score=48.63 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=43.1
Q ss_pred hHHHHHHHHHcC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc-----eEEeCCEEEEcCChhH
Q 031284 50 SGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-----KVVQADAYVAACDVPG 112 (162)
Q Consensus 50 ~~~l~~~l~~~G-g~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g-----~~~~aD~VVsa~~~~~ 112 (162)
.....+..+++| ++|+++++|++|.++++ ++ +++||++.. .+| ..+.|+.||+++..-.
T Consensus 224 ~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~-g~--~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~ 288 (504)
T 1n4w_A 224 DKTYLAAALGTGKVTIQTLHQVKTIRQTKD-GG--YALTVEQKD-TDGKLLATKEISCRYLFLGAGSLG 288 (504)
T ss_dssp TTTHHHHHHHTTSEEEEESEEEEEEEECTT-SS--EEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCC-CC--EEEEEEEeC-CCCccceeEEEeeCEEEEccCCCC
Confidence 344445556676 99999999999999852 14 788998752 134 3688999999998643
No 117
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=95.71 E-value=0.03 Score=45.36 Aligned_cols=64 Identities=8% Similarity=0.037 Sum_probs=48.2
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEE-EecCCce--EEeCCEEEEcCChhH-HhhcCCc
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAM-SKATDKK--VVQADAYVAACDVPG-IKRLLPS 119 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~-~~~~~g~--~~~aD~VVsa~~~~~-~~~Ll~~ 119 (162)
.+.+.+.+.+++.|++|+++++|++|..+++ + . ..|++ . +|+ .++||.||.|...+. ..+.++.
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~--~--~-~~v~~~~---~g~~~~~~a~~vV~AdG~~S~vr~~l~~ 171 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQG--E--R-PYVTFER---DGERLRLDCDYIAGCDGFHGISRQSIPA 171 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTS--S--S-CEEEEEE---TTEEEEEECSEEEECCCTTCSTGGGSCG
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecC--C--c-eEEEEec---CCcEEEEEeCEEEECCCCCcHHHHhcCc
Confidence 4667788888889999999999999987642 2 2 34555 4 676 799999999998764 5556653
No 118
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.70 E-value=0.035 Score=43.50 Aligned_cols=58 Identities=14% Similarity=0.241 Sum_probs=43.9
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--------c---CCceEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSK--------A---TDKKVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--------~---~~g~~~~aD~VVsa~~~ 110 (162)
.+...+.+.+.+ .|++++++++|++|..++ + ++.++++.. + ++...++||.||.|+..
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~---~--~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG---N--RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEET---T--EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecC---C--eEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 455677777766 699999999999999876 5 788887641 1 11257999999999883
No 119
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.69 E-value=0.032 Score=47.54 Aligned_cols=63 Identities=10% Similarity=0.134 Sum_probs=48.6
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH-H-hhcCC
Q 031284 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-I-KRLLP 118 (162)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~-~-~~Ll~ 118 (162)
.+.+.|.+.+++ .|++++.+ +|++|..+++ + .+.+|++. +|+.++||.||.|...+. + .+.+.
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~--g--~~~~v~~~---~g~~i~ad~vV~AdG~~S~~~~~~lg 241 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH--G--DIEKLITK---QNGEISGQLFIDCTGAKSLLLGEHLQ 241 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT--S--CEEEEEES---SSCEEECSEEEECSGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC--C--cEEEEEEC---CCCEEEcCEEEECCCcchHHHHHHhC
Confidence 567788888888 89999999 6999988753 5 55677665 566799999999998864 3 34444
No 120
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.62 E-value=0.042 Score=46.10 Aligned_cols=63 Identities=10% Similarity=0.007 Sum_probs=46.0
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCC----ceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD----KKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~----g~~~~aD~VVsa~~~~ 111 (162)
.+..+.+.+.+.+++.|++++++++|++|..+++ + ....+.+...++ |+.+++|.||.++...
T Consensus 226 ~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~--~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 226 FDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS--G--LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS--S--EEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC--C--cEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 3456788899999999999999999999987653 3 223444431111 2678999999999853
No 121
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.62 E-value=0.025 Score=47.60 Aligned_cols=60 Identities=8% Similarity=0.001 Sum_probs=45.0
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecC--CceEEeCCEEEEcCCh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKAT--DKKVVQADAYVAACDV 110 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~--~g~~~~aD~VVsa~~~ 110 (162)
+..+.+.+.+.++++|++++++++|++|..+++ + ++ .+++..+. ....+++|.||.++..
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~~-~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDD--G--KL-LVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT--S--CE-EEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--C--cE-EEEEecCCCCceeEEEcCEEEECccc
Confidence 456788899999999999999999999987643 4 33 45554221 1237899999999875
No 122
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.61 E-value=0.035 Score=46.32 Aligned_cols=61 Identities=13% Similarity=0.229 Sum_probs=45.6
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~~ 111 (162)
.+..+.+.+.+.+++.|++++++++|++|..++ + .+ .+.+.. +++++.+++|.||.++...
T Consensus 216 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 216 MDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG---D--GV-KLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp SCHHHHHHHHHHHHHSSCCEECSEEEEEEECSS---S--SE-EEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred ccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC---C--eE-EEEEEecCCCcceEEECCEEEECCCCC
Confidence 345678889999999999999999999998664 2 22 344432 2234689999999998854
No 123
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.57 E-value=0.03 Score=43.73 Aligned_cols=55 Identities=7% Similarity=0.114 Sum_probs=41.6
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCChh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~~ 111 (162)
+...+.+++.|++++++++|++|..++ .+.++.+.. ++.++.+++|.||.+++..
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 456677899999999999999997764 345666652 1225679999999998753
No 124
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=95.56 E-value=0.026 Score=49.31 Aligned_cols=62 Identities=15% Similarity=0.101 Sum_probs=48.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChhH-Hhh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKR 115 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~~-~~~ 115 (162)
..+.+.|.+.+++.|++++.+++|++|..++ + .+.+|++.. +| ..++||.||.|..... +.+
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~---g--~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S~lr~ 192 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSD---P--DRVVLTVRR--GGESVTVESDFVIDAGGSGGPISR 192 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCS---T--TCEEEEEEE--TTEEEEEEESEEEECCGGGCHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC---C--CEEEEEEec--CCceEEEEcCEEEECCCCcchhHH
Confidence 3467788889999999999999999999874 3 456776652 34 5799999999998764 444
No 125
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=95.48 E-value=0.045 Score=42.44 Aligned_cols=53 Identities=15% Similarity=0.116 Sum_probs=38.7
Q ss_pred HHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 52 PIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 52 ~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
.+.+.+.+ .|++++++++|++|..++ ++.++++....+|+ .+++|.||.++..
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGDK------VVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEeccC------ceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 44455554 599999999999998763 56677776211254 7899999999874
No 126
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.46 E-value=0.054 Score=45.59 Aligned_cols=61 Identities=11% Similarity=0.133 Sum_probs=45.8
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEec--CCceEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~--~~g~~~~aD~VVsa~~~~ 111 (162)
.+..+.+.+.+.+++.|++++++++|++|..++ + .+ .+.+... ++++.+++|.||.++...
T Consensus 237 ~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~---~--~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 237 MDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG---D--GA-KVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---T--EE-EEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC---C--EE-EEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 345678889999999999999999999998765 3 22 3444421 123689999999999753
No 127
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.38 E-value=0.075 Score=41.29 Aligned_cols=57 Identities=11% Similarity=0.068 Sum_probs=42.0
Q ss_pred hHHHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 50 SGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 50 ~~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+ .|++++++++|++|..++ + ++.++++....+|+ .+++|.||.++...
T Consensus 181 ~~~~~~~l~~~~gv~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 181 APITLEHAKNNDKIEFLTPYVVEEIKGDA---S--GVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp CHHHHHHHHTCTTEEEETTEEEEEEEEET---T--EEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred CHHHHHHHhhCCCeEEEeCCEEEEEECCC---C--cEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 3556667764 799999999999998764 3 56677765312343 78999999999753
No 128
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.37 E-value=0.042 Score=46.91 Aligned_cols=57 Identities=23% Similarity=0.349 Sum_probs=44.4
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEec------------------cCCCCcceEEEEEEEecCCceEEeCCEEEEc
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYD------------------KAANAETYVKGLAMSKATDKKVVQADAYVAA 107 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~------------------~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa 107 (162)
+..+.+.+.+.+++.|++++++++|++|..+ .+ + ++ .+++. +|+.+++|.||.+
T Consensus 191 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~v~~~---~g~~i~~D~vi~a 262 (565)
T 3ntd_A 191 DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK--G--HL-SLTLS---NGELLETDLLIMA 262 (565)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT--C--EE-EEEET---TSCEEEESEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC--C--cE-EEEEc---CCCEEEcCEEEEC
Confidence 3567788889999999999999999999873 11 3 33 23344 6789999999999
Q ss_pred CCh
Q 031284 108 CDV 110 (162)
Q Consensus 108 ~~~ 110 (162)
+..
T Consensus 263 ~G~ 265 (565)
T 3ntd_A 263 IGV 265 (565)
T ss_dssp SCE
T ss_pred cCC
Confidence 974
No 129
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=95.37 E-value=0.032 Score=49.45 Aligned_cols=55 Identities=11% Similarity=0.018 Sum_probs=46.5
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.|.+.+++ .|++| ++++|++|..++ + ++.+|++. +|..+.||.||.|+...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~---g--~V~GV~t~---dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN---N--QVVGVRTN---LGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS---S--BEEEEEET---TSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC---C--EEEEEEEC---CCcEEEeCEEEEccCCC
Confidence 467888999998 59999 688999999876 5 78899876 78899999999999854
No 130
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.36 E-value=0.021 Score=44.88 Aligned_cols=56 Identities=9% Similarity=-0.066 Sum_probs=44.3
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+.+.+.+.+.+++.|++++++++|++|..++ + ++.+|.+. +| .+.+|.||.|+...
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~--~~~~v~~~---~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFG---E--RLRVVARD---GR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEET---T--EEEEEETT---SC-EEEEEEEEECCCSG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECC---C--cEEEEEeC---CC-EEEeCEEEECCCCC
Confidence 4677888888999999999999999998876 3 33335433 44 89999999999854
No 131
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.33 E-value=0.039 Score=46.07 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=44.1
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+..+.+.+.+.++++|++++++++|+++. + . .+.++ +|+.+++|.|+.++..
T Consensus 186 ~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~---~-----~v~~~---~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 186 MDADMNQPILDELDKREIPYRLNEEINAIN--G---N-----EITFK---SGKVEHYDMIIEGVGT 238 (437)
T ss_dssp SCGGGGHHHHHHHHHTTCCEEESCCEEEEE--T---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred ccchhHHHHHHHhhccceEEEeccEEEEec--C---C-----eeeec---CCeEEeeeeEEEEece
Confidence 446788999999999999999999999973 3 2 24565 7889999999999874
No 132
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=95.33 E-value=0.039 Score=43.94 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH-Hhhc
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRL 116 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~-~~~L 116 (162)
.+-+.|.+..++.|++++++++|+++..++ + ++.++....++++..++||.||-|-..+. +.+.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~---~--~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~ 167 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN---G--KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRW 167 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc---c--eeeeeeecccccceEEEEeEEEeCCccccHHHHH
Confidence 456678888899999999999999998886 5 67777654433344689999999988763 4443
No 133
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.27 E-value=0.08 Score=41.53 Aligned_cols=55 Identities=11% Similarity=0.018 Sum_probs=40.4
Q ss_pred hHHHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCCh
Q 031284 50 SGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (162)
Q Consensus 50 ~~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~ 110 (162)
.+.+.+.+.+ .|++++++++|++|..+ + ++.+|++....+| ..+++|.||.++..
T Consensus 190 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~----~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 190 NKVAQARAFANPKMKFIWDTAVEEIQGA----D--SVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp CHHHHHHHHTCTTEEEECSEEEEEEEES----S--SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred chHHHHHHHhcCCceEecCCceEEEccC----C--cEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 3556666655 69999999999999865 3 5667877531234 37899999999874
No 134
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.20 E-value=0.069 Score=44.72 Aligned_cols=59 Identities=15% Similarity=0.107 Sum_probs=44.0
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
...+.+.+.+.+++.|++++++++|++|..++ + .+ .+++..+..|+ .+++|.||.++..
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~---~--~~-~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK---D--GL-HVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---T--EE-EEEEEETTCCSCEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC---C--EE-EEEEeecCCCceeEEEcCEEEECCCc
Confidence 45577888999999999999999999998765 3 32 34443121154 7999999999874
No 135
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.20 E-value=0.017 Score=51.14 Aligned_cols=55 Identities=11% Similarity=0.067 Sum_probs=41.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.+.+.+.++++|++|+++++|++|.-++ . .+....+++++.+++|.||.++..
T Consensus 568 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~---~-----~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 568 FEVNRIQRRLIENGVARVTDHAVVAVGAGG---V-----TVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp TCHHHHHHHHHHTTCEEEESEEEEEEETTE---E-----EEEETTTCCEEEEECSEEEEESCE
T ss_pred hhHHHHHHHHHHCCCEEEcCcEEEEEECCe---E-----EEEEccCCeEEEEECCEEEECCCC
Confidence 456788999999999999999999996442 1 222212335678999999999875
No 136
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.17 E-value=0.06 Score=44.97 Aligned_cols=60 Identities=8% Similarity=0.042 Sum_probs=44.0
Q ss_pred CcccchHHHHHHH-HHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYI-TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l-~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.+ +++|++++++++|++|..++ + . ..+.+.. .+| +.+++|.||.++...
T Consensus 213 ~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~-~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 213 LDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG---D--S-VSLEVEG-KNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS---S--S-EEEEEEC-C---EEEEEESEEEECSCEE
T ss_pred CCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC---C--e-EEEEEEc-CCCceEEEECCEEEECCCcc
Confidence 3455788899999 99999999999999998765 2 2 2344421 124 679999999998753
No 137
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.14 E-value=0.042 Score=46.83 Aligned_cols=57 Identities=14% Similarity=0.061 Sum_probs=41.5
Q ss_pred HHHHHHHHHcC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc-----eEEeCCEEEEcCChh
Q 031284 51 GPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-----KVVQADAYVAACDVP 111 (162)
Q Consensus 51 ~~l~~~l~~~G-g~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g-----~~~~aD~VVsa~~~~ 111 (162)
....+..+++| ++|+++++|++|.++++ ++ +++||++.. .+| ..+.|+.||+++..-
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~-g~--~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATG-SG--YSVTMEQID-EQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSS-SS--EEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCC-CC--EEEEEEEeC-CCCcccccEEEEeCEEEEccCcc
Confidence 44444455565 99999999999999862 13 688998752 124 368899999999864
No 138
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.12 E-value=0.079 Score=44.60 Aligned_cols=62 Identities=13% Similarity=0.011 Sum_probs=45.3
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|++++++++|++|...++ + .+ .+++....+|+ .+++|.||.++...
T Consensus 223 ~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~--~--~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 223 FDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT--N--QL-QVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT--S--CE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC--C--cE-EEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 3456788899999999999999999999987542 3 22 34444221244 47899999998753
No 139
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.05 E-value=0.036 Score=45.85 Aligned_cols=51 Identities=8% Similarity=-0.001 Sum_probs=39.1
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEE-ecCCceEEeCCEEEEcCC
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMS-KATDKKVVQADAYVAACD 109 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~-~~~~g~~~~aD~VVsa~~ 109 (162)
+.+.+.+.++++|++++++++|++|+-+ . ++++ .+++++++++|.||.+.+
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~-------~---v~~~~~~~~g~~i~~D~vv~a~G 253 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD-------K---VIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS-------E---EEEECTTSCEEEEECSEEEEECE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC-------e---EEEEecCCCceEEeeeEEEECCC
Confidence 6788999999999999999999998432 2 3444 112377899999999864
No 140
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=94.98 E-value=0.048 Score=44.04 Aligned_cols=58 Identities=16% Similarity=0.108 Sum_probs=45.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh-HHhhcC
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP-GIKRLL 117 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~-~~~~Ll 117 (162)
.+.+.|.+.+++.|++|+++++|++|.. + + .|++. +|+.++||.||.|...+ ...+.+
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~---~-----~v~~~---~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V---G-----RLTLQ---TGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T---T-----EEEET---TSCEEECSEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C---C-----EEEEC---CCCEEEcCEEEECCCccHHHHHHh
Confidence 4678888999999999999999999976 3 2 34454 67789999999999876 344443
No 141
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=94.97 E-value=0.038 Score=49.03 Aligned_cols=55 Identities=11% Similarity=0.114 Sum_probs=46.2
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.|.+.+++ .|++| ++++|++|..++ + ++.+|++. +|..+.||.||.|+...
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~---g--~V~GV~t~---dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN---D--RVVGAVTQ---MGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS---S--BEEEEEET---TSEEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC---C--EEEEEEEC---CCCEEECCEEEEcCCCC
Confidence 467888899988 69999 688999998876 5 78888776 67889999999998864
No 142
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=94.90 E-value=0.086 Score=44.77 Aligned_cols=62 Identities=6% Similarity=0.082 Sum_probs=47.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce---EEeCCEEEEcCChhH-HhhcCC
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK---VVQADAYVAACDVPG-IKRLLP 118 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~---~~~aD~VVsa~~~~~-~~~Ll~ 118 (162)
.+.+.|.+.+++.|++|+++++|++|+.+++ .++ +++. +++ .++||.||.|-..+. ..+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-----~v~-v~~~---~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGD-----HVV-VEVE---GPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSS-----CEE-EEEE---CSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-----EEE-EEEE---cCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 4667788888889999999999999998763 343 5554 332 789999999988764 555553
No 143
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.83 E-value=0.085 Score=44.84 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc-eEEeCCEEEEcCChhH-HhhcCC
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVPG-IKRLLP 118 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g-~~~~aD~VVsa~~~~~-~~~Ll~ 118 (162)
.+.+.|.+.+++.|++|+++++|++|+.++ + .++ +++.. ++| +.++||.||.|-..+. ..+.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~---~--~v~-v~~~~-~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG---A--GVT-VEVRG-PEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET---T--EEE-EEEEE-TTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC---C--eEE-EEEEc-CCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 466778888888999999999999999876 3 343 54541 112 2789999999988764 555553
No 144
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=94.78 E-value=0.078 Score=45.05 Aligned_cols=66 Identities=14% Similarity=0.067 Sum_probs=47.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEE--EEEecCC-ceEEeCCEEEEcCChh-HHhhcC
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGL--AMSKATD-KKVVQADAYVAACDVP-GIKRLL 117 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv--~~~~~~~-g~~~~aD~VVsa~~~~-~~~~Ll 117 (162)
..+.+.|.+.+++.|++|+++++|++|+.+++ + ++.++ ++. +++ +..++||.||.|...+ .+.+.+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~--~~~~v~v~~~-~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDD--D--AGAGVTARLA-GPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECG--G--GCSEEEEEEE-ETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCC--C--ccccEEEEEE-cCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 35677889999999999999999999998752 3 22333 333 111 2679999999999876 455555
No 145
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.70 E-value=0.14 Score=40.04 Aligned_cols=59 Identities=10% Similarity=0.045 Sum_probs=41.3
Q ss_pred hHHHH-HHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 50 SGPIR-KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 50 ~~~l~-~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
.+.+. +.+++.|++++++++|++|..+++ .+ ++.++++....+| +.+++|.||.++...
T Consensus 197 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 197 SKIMQQRALSNPKIDVIWNSSVVEAYGDGE-RD--VLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp CHHHHHHHHTCTTEEEECSEEEEEEEESSS-SS--SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred cHHHHHHHHhCCCeeEecCCceEEEeCCCC-cc--ceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 34555 455789999999999999987641 11 3556766532123 678999999999854
No 146
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.62 E-value=0.036 Score=45.12 Aligned_cols=52 Identities=19% Similarity=0.261 Sum_probs=41.9
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.++++|++++++++|++|. . . +++++ +|+ +++|.||.++..
T Consensus 181 ~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~---~-----~v~~~---~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 181 LDEELSNMIKDMLEETGVKFFLNSELLEAN--E---E-----GVLTN---SGF-IEGKVKICAIGI 232 (367)
T ss_dssp CCHHHHHHHHHHHHHTTEEEECSCCEEEEC--S---S-----EEEET---TEE-EECSCEEEECCE
T ss_pred CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e---e-----EEEEC---CCE-EEcCEEEECcCC
Confidence 345677888999999999999999999995 2 2 35555 677 999999999874
No 147
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.50 E-value=0.066 Score=44.38 Aligned_cols=54 Identities=6% Similarity=-0.049 Sum_probs=39.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEE-ecCCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMS-KATDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~-~~~~g~~~~aD~VVsa~~~ 110 (162)
+...+.+.+.++++|+++++|++|++|+ + + + +.+. .+++++++++|.+|.+++.
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~---~--~---~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIE--P---D--K---VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEEC--S---S--E---EEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEe--C---C--c---eEEEeeCCCceEeecceEEEeccC
Confidence 3455678889999999999999999984 3 2 2 2232 2334568999999998873
No 148
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=94.50 E-value=0.073 Score=45.81 Aligned_cols=61 Identities=13% Similarity=0.036 Sum_probs=43.7
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEeccCCC-----CcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAAN-----AETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~-----~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
.+.+.|.+.+++ .|++|+++++|++|..+++ + + ++.||.+....+|+ .+.||.||.|+.-.
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTR--RVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSC--BEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCC--EEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 566777888888 7999999999999998432 1 2 47788765322454 68999999998753
No 149
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=94.39 E-value=0.05 Score=46.57 Aligned_cols=55 Identities=7% Similarity=0.051 Sum_probs=40.6
Q ss_pred HHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EE---eCCEEEEcCChhH
Q 031284 53 IRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VV---QADAYVAACDVPG 112 (162)
Q Consensus 53 l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~---~aD~VVsa~~~~~ 112 (162)
+.+.+++ .|++|++++.|++|..++ + +++||++....+|+ .+ .+|.||.++....
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~---~--~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNG---S--QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEET---T--EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeC---C--EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 4444554 589999999999999986 5 89999875311243 33 8999999998643
No 150
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.34 E-value=0.078 Score=41.90 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=39.5
Q ss_pred HHHH-HHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCChh
Q 031284 51 GPIR-KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 51 ~~l~-~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~~ 111 (162)
+.+. +.+++.|++++++++|++|..++ ++.++++.. ++.++.+++|.||.++...
T Consensus 194 ~~~~~~~~~~~gV~v~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 194 KIMLDRARNNDKIRFLTNHTVVAVDGDT------TVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp TTHHHHHHHCTTEEEECSEEEEEEECSS------SCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred HHHHHHHhccCCcEEEeCceeEEEecCC------cEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 3444 44567999999999999997653 345666653 2223679999999999854
No 151
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=94.18 E-value=0.16 Score=44.54 Aligned_cols=62 Identities=21% Similarity=0.080 Sum_probs=45.8
Q ss_pred cchHHHHHHHHHc-Cc-EEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDK-GG-RFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~-Gg-~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
.+...+.+.+++. |+ +|+.+++|++|..+++..| ++.||.+....+|+ .+.|+.||.|+.-.
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g--~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPN--AVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTT--BEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccc--eeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 4667888888888 99 9999999999998741013 58888753211344 68999999988743
No 152
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=94.07 E-value=0.089 Score=44.37 Aligned_cols=57 Identities=19% Similarity=0.057 Sum_probs=44.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.|.+.+++.|++++.+++| +|..++ + ++.|+.+.. ++..+.||.||.|+...
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~---~--~v~Gv~v~~--~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD---G--KVTGFVTEK--RGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET---T--EEEEEEETT--TEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC---C--EEEEEEEEe--CCCeEEeeeEEECCCCC
Confidence 357788888888899999999999 998875 5 788886631 23357799999998854
No 153
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.02 E-value=0.13 Score=44.48 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=46.3
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+..+.+.+.+.++++|+++++++.|+++...+ + .+ .+.+. +++.+.+|.|+.|+..
T Consensus 261 ~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~---~--~~-~v~~~---~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 261 FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD---D--KI-LVEFS---DKTSELYDTVLYAIGR 317 (542)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET---T--EE-EEEET---TSCEEEESEEEECSCE
T ss_pred cchhHHHHHHHHHHhhcceeecceEEEEEEecC---C--eE-EEEEc---CCCeEEEEEEEEcccc
Confidence 456789999999999999999999999998876 3 22 34444 6778899999999974
No 154
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.99 E-value=0.094 Score=40.14 Aligned_cols=60 Identities=10% Similarity=0.079 Sum_probs=45.0
Q ss_pred eeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 37 ~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++-+...... .+.+.+.+.+++.|++++. ++|++|..+ . ++++. +|+.+++|.||.++..
T Consensus 165 ~v~~v~~~~~-~~~~~~~~~l~~~gv~i~~-~~v~~i~~~-------~--~v~~~---~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 165 ETTFFTNGIV-EPDADQHALLAARGVRVET-TRIREIAGH-------A--DVVLA---DGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEEEECTTTC-CCCHHHHHHHHHTTCEEEC-SCEEEEETT-------E--EEEET---TSCEEEESEEEECCEE
T ss_pred cEEEEECCCC-CCCHHHHHHHHHCCcEEEc-ceeeeeecC-------C--eEEeC---CCCEEEEEEEEEccCc
Confidence 4444432221 5788899999999999995 999998543 2 45665 7889999999999874
No 155
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=93.94 E-value=0.066 Score=46.08 Aligned_cols=49 Identities=10% Similarity=0.135 Sum_probs=38.2
Q ss_pred HcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCC-EEEEcCChh
Q 031284 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQAD-AYVAACDVP 111 (162)
Q Consensus 59 ~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD-~VVsa~~~~ 111 (162)
+.|++|++++.|++|.++++ + +++||++....+| ..+.|+ .||.++..-
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~--~--~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD--R--RCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT--S--BEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred CCCcEEEeCCEEEEEEECCC--C--eEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 57999999999999999863 5 7999987632114 368898 899999864
No 156
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=93.85 E-value=0.11 Score=40.18 Aligned_cols=58 Identities=9% Similarity=0.126 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+++.|++++++++|++|..+.+ ++ ....+.+. +|+.+.+|.+|.|+...
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~-~~--~~~~v~~~---~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAV-EG--GLHQIETA---SGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSS-TT--CCEEEEET---TSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEeccc-CC--ceEEEEEC---CCCEEEeCEEEECcCCC
Confidence 4677888888899999999999999987531 01 12345444 67789999999998753
No 157
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.85 E-value=0.095 Score=40.78 Aligned_cols=55 Identities=7% Similarity=0.058 Sum_probs=43.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+.+.+.+.+.+++.|++++++++|++|..+++ + ...|.+. +|+ +.+|.||.|+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~---~~~v~~~---~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQAD--G---VFKLVTN---EET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTT--S---CEEEEES---SEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCC--C---cEEEEEC---CCE-EEeCEEEECCCC
Confidence 45778888888999999999999999988752 2 2345554 454 999999999876
No 158
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.80 E-value=0.09 Score=43.94 Aligned_cols=55 Identities=18% Similarity=0.190 Sum_probs=42.0
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
+..+.+.+.+.++++|++++++++|++|.. + + +.+.. .+| +.+++|.||.++...
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~------~---v~v~~-~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 211 DSELTAPVAESLKKLGIALHLGHSVEGYEN-G------C---LLAND-GKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T------E---EEEEC-SSSCCCEECCSCEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C------C---EEEEE-CCCceEEEECCEEEECcCCC
Confidence 456778889999999999999999999965 3 3 22221 135 689999999998853
No 159
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.79 E-value=0.099 Score=44.99 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=44.5
Q ss_pred cchHHHHHHHHHcCc--EEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.+.+.+..++.|. +++++++|+++..+++ + ....|.+. +|+.+.||.||.|+..
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~--~--~~~~V~~~---~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD--E--NLWEVTTD---HGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT--T--TEEEEEET---TSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC--C--CEEEEEEc---CCCEEEeCEEEECCcc
Confidence 466778888888998 8999999999998763 3 23455554 6888999999999985
No 160
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=93.75 E-value=0.015 Score=47.36 Aligned_cols=46 Identities=11% Similarity=-0.110 Sum_probs=36.8
Q ss_pred HHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+++.|++++++++|.++..+++ + ..+++. +|+.+++|.++.+.+.
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~--~----~~v~~~---~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTE--A----MTVETS---FGETFKAAVINLIPPQ 256 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETT--T----TEEEET---TSCEEECSEEEECCCE
T ss_pred HHHhcCcEEEeCceEEEEEeccc--c----eEEEcC---CCcEEEeeEEEEecCc
Confidence 35678999999999999988752 2 345555 7899999999998873
No 161
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.74 E-value=0.1 Score=44.97 Aligned_cols=56 Identities=9% Similarity=-0.026 Sum_probs=44.3
Q ss_pred cchHHHHHHHHHcCc--EEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.+.+.+..++.|. +++++++|+++..+++ + ....|++. +|+.+.||.||.|+..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~--~--~~w~V~~~---~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE--G--LRWTVRTD---RGDEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT--T--TEEEEEET---TCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC--C--CEEEEEEC---CCCEEEeCEEEECcCC
Confidence 466777888888998 8999999999998763 3 23455554 7888999999999984
No 162
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=93.70 E-value=0.066 Score=46.42 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=47.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc-eEEeCCEEEEcCChh-HHhhcCC
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP-GIKRLLP 118 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g-~~~~aD~VVsa~~~~-~~~~Ll~ 118 (162)
.+.+.|.+.+++.|++|+++++|++|+.+++ .+ .|++. +.+| +.++||.||.|-..+ .+.+.+.
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~-----~v-~v~~~-~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAE-----AV-EVTVA-GPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSS-----CE-EEEEE-ETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-----eE-EEEEE-eCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 4667788888889999999999999988763 33 24442 1257 689999999998876 4555553
No 163
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.63 E-value=0.14 Score=40.79 Aligned_cols=57 Identities=9% Similarity=-0.045 Sum_probs=44.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|++++++++|++|..+++ + ...|.+. +|+.+.+|.+|.|....
T Consensus 74 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~---~~~v~~~---~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 74 IDLVESLWAQAERYNPDVVLNETVTKYTKLDD--G---TFETRTN---TGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCCEEEEEECTT--S---CEEEEET---TSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC--c---eEEEEEC---CCcEEEeeEEEEccCCC
Confidence 45677788888889999999999999988752 3 2244444 67789999999998763
No 164
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.59 E-value=0.076 Score=43.61 Aligned_cols=52 Identities=4% Similarity=-0.061 Sum_probs=41.6
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.....+.+++.|++++++++|++|..++ + .|++. +|+.+.+|.+|.|+..
T Consensus 63 ~l~~~~~~~~~~~~i~~~~~~~V~~id~~~---~-----~v~~~---~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 63 DILIKKNDWYEKNNIKVITSEFATSIDPNN---K-----LVTLK---SGEKIKYEKLIIASGS 114 (385)
T ss_dssp GTBSSCHHHHHHTTCEEECSCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred HccCCCHHHHHHCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEecCC
Confidence 344556777889999999999999998875 3 24555 7889999999999875
No 165
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=93.58 E-value=0.11 Score=46.10 Aligned_cols=55 Identities=13% Similarity=0.133 Sum_probs=45.2
Q ss_pred cchHHHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.|.+.+++. |++|+ +.+|+.|..++ + ++.||.+. +|+.+.||.||.|+...
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~---g--~V~GV~t~---~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS---G--KFSSVTVR---SGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---T--EEEEEEET---TSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC---C--EEEEEEEC---CCcEEEeCEEEECcCCC
Confidence 4678888898885 99995 66999998876 5 78888765 67899999999998854
No 166
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=93.54 E-value=0.15 Score=45.14 Aligned_cols=61 Identities=18% Similarity=0.169 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHc--CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDK--GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~--Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~ 110 (162)
.+...|.+.++++ |++|+.++.|.+|..+++..| ++.|+......+| ..+.|+.||.|+.-
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g--~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPN--RIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTT--BEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccc--eEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 5778888888888 999999999999998752114 6888865321234 36899999999873
No 167
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=93.50 E-value=0.094 Score=44.52 Aligned_cols=63 Identities=10% Similarity=-0.108 Sum_probs=44.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChhH
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~~ 112 (162)
..+.+.|.+.+++.|++|+++++|++|..+++ ++ ....|.+....+| +.++||.||.|.....
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~~--~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPR-KG--SGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCS-TT--CCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecC-CC--CEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 34667888888899999999999999987521 12 2345655311134 4789999999998764
No 168
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=93.48 E-value=0.31 Score=37.96 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=42.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCC
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACD 109 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~ 109 (162)
.+.+.+.+.+++.|++++.++ |+++..++ + ++.+|++. +|+.+.+|.+|.++.
T Consensus 181 ~~~~~~~~~l~~~g~~~~~~~-v~~~~~~~---~--~~~~v~~~---~g~~i~~~~~vi~~g 233 (304)
T 4fk1_A 181 ELSQTIMDELSNKNIPVITES-IRTLQGEG---G--YLKKVEFH---SGLRIERAGGFIVPT 233 (304)
T ss_dssp CCCHHHHHHHHTTTCCEECSC-EEEEESGG---G--CCCEEEET---TSCEECCCEEEECCE
T ss_pred cchhhhhhhhhccceeEeeee-EEEeecCC---C--eeeeeecc---ccceeeecceeeeec
Confidence 577889999999999999875 88887665 5 67788776 788999998877653
No 169
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.47 E-value=0.27 Score=41.91 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=42.1
Q ss_pred HHHHHHHHH-cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCCh
Q 031284 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~ 110 (162)
+.+.+.+++ .|++++++++|++|.-++ + ++.++++....+| ..+++|.||.++..
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGDG---S--KVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEECS---S--SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcCC---C--cEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 557778888 699999999999998764 4 6778877531234 36899999999874
No 170
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=93.42 E-value=0.32 Score=40.19 Aligned_cols=46 Identities=17% Similarity=0.033 Sum_probs=33.7
Q ss_pred cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 60 ~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
.|++++++++|++|..++ + . ..+.+....+|+ .+++|.||.++...
T Consensus 329 ~~v~i~~~~~v~~v~~~~---~--~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA---Q--G-IELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEET---T--E-EEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecC---C--E-EEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 699999999999998765 3 2 345554322344 58999999999854
No 171
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=93.37 E-value=0.076 Score=46.60 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=53.0
Q ss_pred cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChhHHhhcC-Cchhhc--------chh--
Q 031284 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPGIKRLL-PSSWRE--------MKF-- 126 (162)
Q Consensus 60 ~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~~~~~Ll-~~~~~~--------~~~-- 126 (162)
.|++|++++.|++|..+++ ++ +++||++....+| ..+.||.||.++......++| .+.... .+.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~-~~--~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~~l 349 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNAL-NS--EIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPELL 349 (623)
T ss_dssp EEEEEECSEEEEEEEECTT-SS--CEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCSSC
T ss_pred CCEEEEeCCEEEEEEEECC-CC--EEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCCCC
Confidence 4899999999999998752 24 7899988632234 368899999999864333322 211110 000
Q ss_pred hhhhhcCCCCCEEEEEEEeCcc
Q 031284 127 FNNIYALVGVPVVTVQLRYNGW 148 (162)
Q Consensus 127 ~~~l~~l~~~~~~~v~l~~d~~ 148 (162)
..-=+.|...+...+.+.++.+
T Consensus 350 ~~vG~nl~dh~~~~~~~~~~~~ 371 (623)
T 3pl8_A 350 PSLGSYITEQSLVFCQTVMSTE 371 (623)
T ss_dssp TTTTBSCBCCCEEEEEEEECHH
T ss_pred cccccchhhCcCceEEEEECCc
Confidence 0111345555677777777655
No 172
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=93.33 E-value=0.12 Score=42.91 Aligned_cols=55 Identities=13% Similarity=0.112 Sum_probs=43.6
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++..+.+.+.+.+++. ++++++++|++|.-++ ++..+ .. +++.+++|.||.++..
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~------~v~~v-~~---~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE------RVEKV-VT---DAGEYKAELVILATGI 242 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS------SCCEE-EE---TTEEEECSEEEECSCE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC------cEEEE-Ee---CCCEEECCEEEEeeCC
Confidence 4556778889999999 9999999999996543 34444 33 5788999999999974
No 173
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.31 E-value=0.12 Score=41.05 Aligned_cols=54 Identities=9% Similarity=0.220 Sum_probs=40.2
Q ss_pred cchHHHHHHHHHcC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEe-CCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQ-ADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~G-g~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~-aD~VVsa~~~ 110 (162)
.+.+.+.+.+++.| ++++++++|++|..++ + . ..+++. +|+.+. +|.||.++..
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~---~--~-~~v~~~---~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNN---G--Q-YHISFD---SGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEET---T--E-EEEEES---SSCCEEESSCCEECCCB
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecC---C--c-eEEEec---CCeEeccCCceEEeecc
Confidence 44577888888897 9999999999997654 2 2 345554 676554 6999998874
No 174
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.30 E-value=0.18 Score=39.55 Aligned_cols=56 Identities=13% Similarity=0.038 Sum_probs=43.0
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|.+++++++|++|..++ + . ..|.+. +|+.+.+|.||.|+...
T Consensus 65 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~--~-~~v~~~---~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVAPFNPVYSLGERAETLEREG---D--L-FKVTTS---QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHGGGCCEEEESCCEEEEEEET---T--E-EEEEET---TSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEECC---C--E-EEEEEC---CCCEEEeCEEEECCCCC
Confidence 3466778888888999999999999998875 2 2 234343 56789999999998763
No 175
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.30 E-value=0.19 Score=39.80 Aligned_cols=54 Identities=13% Similarity=-0.047 Sum_probs=41.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+++.|++++++++|++|..+++ + ..|.+. ++ .+.+|+||.|+...
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~--~----~~v~~~---~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDA--Y----YTIATT---TE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSS--S----EEEEES---SC-CEEEEEEEECCCST
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCC--e----EEEEeC---CC-EEEeCEEEECCCCC
Confidence 3556777888889999999999999988752 2 234433 34 68999999998864
No 176
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.23 E-value=0.12 Score=41.96 Aligned_cols=58 Identities=14% Similarity=0.085 Sum_probs=43.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH-Hhhc
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRL 116 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~-~~~L 116 (162)
.+.+.|.+.+++ ++|+++++|++|..++ + .+ .+++. +|+.++||.||.|...+. ..+.
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~---~--~v-~v~~~---~g~~~~a~~vV~AdG~~S~vr~~ 186 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDA---D--GV-TVWFT---DGSSASGDLLIAADGSHSALRPW 186 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEET---T--EE-EEEET---TSCEEEESEEEECCCTTCSSHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecC---C--cE-EEEEc---CCCEEeeCEEEECCCcChHHHHH
Confidence 355667777666 9999999999999876 3 33 34444 788999999999988763 4443
No 177
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.05 E-value=0.1 Score=36.93 Aligned_cols=56 Identities=9% Similarity=-0.035 Sum_probs=38.4
Q ss_pred ceEEeCCEEEEcCChhHHhhcCCchhhcchhhhhhhcCCCCCEEEEEEEeCcccCc
Q 031284 96 KKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTE 151 (162)
Q Consensus 96 g~~~~aD~VVsa~~~~~~~~Ll~~~~~~~~~~~~l~~l~~~~~~~v~l~~d~~~~~ 151 (162)
.+.++||+||+++|+..++.+-=....+....+.++++......=+++.|++|+=+
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~ 58 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWE 58 (130)
T ss_dssp CEEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGG
T ss_pred ceEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCC
Confidence 34789999999999999886421101222334556777766688889999988653
No 178
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=93.01 E-value=0.19 Score=41.61 Aligned_cols=51 Identities=8% Similarity=0.008 Sum_probs=37.8
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEE-ecCC-----ceEEeCCEEEEcCC
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMS-KATD-----KKVVQADAYVAACD 109 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~-~~~~-----g~~~~aD~VVsa~~ 109 (162)
..+.+.+.++++|++++++++|++|.-+ .+ ++. .+.+ ++++++|.++.+.+
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~~-------~v---~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVEDN-------KM---YVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEETT-------EE---EEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEECC-------eE---EEEecccCCccccceEEEEeEEEEcCC
Confidence 6778889999999999999999999532 22 222 1112 56789999998865
No 179
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.90 E-value=0.2 Score=40.68 Aligned_cols=55 Identities=16% Similarity=0.153 Sum_probs=39.8
Q ss_pred HHHHHHHH--cCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH-Hhh
Q 031284 52 PIRKYITD--KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKR 115 (162)
Q Consensus 52 ~l~~~l~~--~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~-~~~ 115 (162)
.+.+.|.+ .|++|+++++|++|..++ + .+ .+++. +|+.++||.||.|...+. ..+
T Consensus 100 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~---~--~v-~v~~~---~g~~~~ad~vV~AdG~~S~vr~ 157 (397)
T 2vou_A 100 SIYGGLYELFGPERYHTSKCLVGLSQDS---E--TV-QMRFS---DGTKAEANWVIGADGGASVVRK 157 (397)
T ss_dssp HHHHHHHHHHCSTTEETTCCEEEEEECS---S--CE-EEEET---TSCEEEESEEEECCCTTCHHHH
T ss_pred HHHHHHHHhCCCcEEEcCCEEEEEEecC---C--EE-EEEEC---CCCEEECCEEEECCCcchhHHH
Confidence 34444444 499999999999998876 3 33 35454 677899999999988763 443
No 180
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=92.56 E-value=0.28 Score=42.91 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=47.9
Q ss_pred cchHHHHHHHHHcCc--EEEcCceeeEEEeccCCCCcceEEEEEEEe---cCCc--eEEeCCEEEEcCChh-HHhhcCC
Q 031284 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSK---ATDK--KVVQADAYVAACDVP-GIKRLLP 118 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~---~~~g--~~~~aD~VVsa~~~~-~~~~Ll~ 118 (162)
.+.+.|.+.+++.|+ +|+++++|++|+.++++++ ....+++.. ..+| +.++||.||.|-..+ ...+.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~--~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAAD--YPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSS--CCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCc--CCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 466788899999998 9999999999988752002 123454442 0124 579999999999876 4556554
No 181
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=92.55 E-value=0.34 Score=40.56 Aligned_cols=61 Identities=13% Similarity=0.111 Sum_probs=43.4
Q ss_pred ccchHHHHHHHHHcCcE--EEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGR--FHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~--i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+++++.|++ |+++++|++|..+++ + ....|++....+| +.+.+|.||.|...+
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~--~--~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED--S--QTFTVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT--T--TEEEEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC--C--CcEEEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 34667788888888998 999999999988752 2 1334555421124 578999999999843
No 182
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=92.48 E-value=0.55 Score=39.88 Aligned_cols=63 Identities=10% Similarity=0.044 Sum_probs=42.9
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEeccC-CCCcceEEEEEEEecCCc---eEEeCCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKA-ANAETYVKGLAMSKATDK---KVVQADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~-~~~~~~v~gv~~~~~~~g---~~~~aD~VVsa~~~~ 111 (162)
++..+.+.+.+.+++.|++++++++|++|...++ +++ .+ .+.+... +| ..+++|.||.++...
T Consensus 248 ~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~--~~-~v~~~~~-~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 248 FDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPG--RL-RVVAQST-NSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTC--EE-EEEEEES-SSSCEEEEEESEEEECSCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCc--eE-EEEEEEC-CCcEEEEEECCEEEEecCCc
Confidence 3456788899999999999999999988875321 012 22 2333221 33 256899999999853
No 183
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=92.38 E-value=0.18 Score=43.41 Aligned_cols=57 Identities=7% Similarity=0.071 Sum_probs=44.7
Q ss_pred ccchHHHHHHHHHcCc--EEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg--~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+.+.+.+..++.|. +++++++|+++..+++ + ....|++. +|+.+.||.||.|+..
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~--~~w~V~~~---~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN--D--RLWEVTLD---NEEVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG--G--TEEEEEET---TTEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC--C--CEEEEEEC---CCCEEEeCEEEECcCC
Confidence 4567778888888887 8999999999998753 3 23455554 7889999999999984
No 184
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=92.30 E-value=0.15 Score=44.59 Aligned_cols=52 Identities=10% Similarity=0.062 Sum_probs=36.8
Q ss_pred HHcCcEEEcCceeeEEEeccCC-CCcceEEEEEEE-ecCCceEEeCC-EEEEcCChh
Q 031284 58 TDKGGRFHLRWGCREILYDKAA-NAETYVKGLAMS-KATDKKVVQAD-AYVAACDVP 111 (162)
Q Consensus 58 ~~~Gg~i~~~~~V~~I~~~~~~-~~~~~v~gv~~~-~~~~g~~~~aD-~VVsa~~~~ 111 (162)
++.+.+|++++.|++|.++.+. ++ +++||+.. .++....+.|+ .||+++..-
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~--ra~GV~~~~~~G~~~~v~A~kEVILsAGa~ 292 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTP--RAVGVEFGTHKGNTHNVYAKHEVLLAAGSA 292 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSC--EEEEEEEESSTTCEEEEEEEEEEEECSCTT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCC--EEEEEEEEecCCcEEEEEECCEEEEeCCcc
Confidence 4679999999999999998310 15 89999875 22222356786 588888743
No 185
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.22 E-value=0.23 Score=38.33 Aligned_cols=55 Identities=15% Similarity=-0.055 Sum_probs=42.3
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|+++++ ++|++|..++ + + ..+.+. +|+.+.+|.+|.|+...
T Consensus 70 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~--~-~~v~~~---~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 70 SDMIKVFNKHIEKYEVPVLL-DIVEKIENRG---D--E-FVVKTK---RKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-SCEEEEEEC-------C-EEEEES---SSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEecC---C--E-EEEEEC---CCCEEEcCEEEECcCCC
Confidence 45677788888899999999 9999998875 2 2 234444 56789999999998754
No 186
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=92.20 E-value=0.42 Score=40.30 Aligned_cols=58 Identities=10% Similarity=-0.008 Sum_probs=43.8
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
+..+.+.+.+.+++. ++++++++|++|..++ + ++. +.+. +.+| +.+++|.||.++...
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~---~--~v~-v~~~-~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE---D--AVE-VIYF-DKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS---S--SEE-EEEE-CTTCCEEEEEESEEEECSCCE
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC---C--EEE-EEEE-eCCCceEEEECCEEEEeeCCc
Confidence 456788888888888 9999999999998875 3 332 4332 1245 689999999999854
No 187
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=91.94 E-value=0.45 Score=41.76 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=39.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
......+.+.+++.|++++++++|++|. + + . +++.. +| +++++|.||.++...
T Consensus 573 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~--~---~--~---v~~~~--~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 573 KTTGWIHRTTLLSRGVKMIPGVSYQKID--D---D--G---LHVVI--NGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp TTTHHHHHHHHHHTTCEEECSCEEEEEE--T---T--E---EEEEE--TTEEEEECCSEEEECCCEE
T ss_pred cccHHHHHHHHHhcCCEEEeCcEEEEEe--C---C--e---EEEec--CCeEEEEeCCEEEECCCcc
Confidence 3445567889999999999999999985 3 2 2 23311 45 579999999999854
No 188
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=91.87 E-value=0.32 Score=44.74 Aligned_cols=53 Identities=9% Similarity=0.010 Sum_probs=40.6
Q ss_pred HHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-cC---Cc--eEEeCCEEEEcCCh
Q 031284 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-AT---DK--KVVQADAYVAACDV 110 (162)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~-~~---~g--~~~~aD~VVsa~~~ 110 (162)
.+.++++|++|++++.|++|.-+++ + ++.+|++.. +. +| +.+++|.||.++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~--~--~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN--G--ELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT--S--CEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC--C--CEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 6778999999999999999987411 4 677887762 00 13 67999999999874
No 189
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.58 E-value=0.33 Score=41.32 Aligned_cols=58 Identities=10% Similarity=0.145 Sum_probs=43.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+++.|++++.+++|++|..+.+ ++ ....|.+. +|+.+.+|.||.|+...
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~-~~--~~~~V~~~---~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAAT-EG--GLHQIETA---SGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSS-TT--SCEEEEET---TSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccC-CC--ceEEEEEC---CCCEEEcCEEEECCCCC
Confidence 4677888888999999999999999986521 01 12345554 67789999999998853
No 190
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=91.57 E-value=0.36 Score=37.33 Aligned_cols=54 Identities=11% Similarity=0.092 Sum_probs=41.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+.+.+.+.+++.|+++++ ++|++|..++ + .+ .+.+. +|+.+++|.||.|...
T Consensus 59 ~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~---~--~~-~v~~~---~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD---S--HF-VILAE---DGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHHTTSCEEEC-SCEEEEEEET---T--EE-EEEET---TSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC---C--EE-EEEEc---CCCEEECCEEEECCCC
Confidence 35677788888889999998 8999998875 3 22 34343 6778999999999884
No 191
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=91.31 E-value=0.34 Score=40.09 Aligned_cols=59 Identities=10% Similarity=-0.134 Sum_probs=42.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce---EEeCCEEEEcCChhH
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK---VVQADAYVAACDVPG 112 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~---~~~aD~VVsa~~~~~ 112 (162)
.+.+.+.++.++.+..|+++++|++|..++ + . ..|++....+|+ .+.+|.||.|...+.
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~---~--~-~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD---G--S-WVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET---T--E-EEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC---C--e-EEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 456677777777888999999999998765 3 2 345454211255 789999999988643
No 192
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=91.04 E-value=0.37 Score=41.14 Aligned_cols=56 Identities=9% Similarity=0.016 Sum_probs=40.3
Q ss_pred chHHHHHHHHHcC--cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 49 LSGPIRKYITDKG--GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 49 l~~~l~~~l~~~G--g~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+.+.+.+..++.| .+++++++|+++..+++ + ....|.+. +|+.++||.||.|....
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~--~~w~V~~~---~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEA--T--NTWTVDTN---HGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETT--T--TEEEEEET---TCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCC--C--CeEEEEEC---CCCEEEeCEEEECcCCC
Confidence 4455555566665 68999999999998752 2 23345544 67789999999999854
No 193
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=90.73 E-value=0.28 Score=41.17 Aligned_cols=56 Identities=14% Similarity=0.107 Sum_probs=39.3
Q ss_pred hHHHHHHHHH------cCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-----c--------CCc--eEEeCCEEEEcC
Q 031284 50 SGPIRKYITD------KGGRFHLRWGCREILYDKAANAETYVKGLAMSK-----A--------TDK--KVVQADAYVAAC 108 (162)
Q Consensus 50 ~~~l~~~l~~------~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~-----~--------~~g--~~~~aD~VVsa~ 108 (162)
.+.+.+++++ +|+++++++.|.+|.-+ + ++.+|++.. + .+| +.+++|.||.++
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~----~--~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~ 322 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK----R--KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSV 322 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS----S--SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECS
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC----C--cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcc
Confidence 3455566666 89999999999999754 3 455665531 0 024 468999999999
Q ss_pred Chh
Q 031284 109 DVP 111 (162)
Q Consensus 109 ~~~ 111 (162)
...
T Consensus 323 G~~ 325 (456)
T 1lqt_A 323 GYR 325 (456)
T ss_dssp CEE
T ss_pred ccc
Confidence 854
No 194
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=90.68 E-value=0.41 Score=37.17 Aligned_cols=58 Identities=17% Similarity=0.083 Sum_probs=43.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|+++++++ |+++..++ + .+ .+.+....++..+.+|.+|.|....
T Consensus 84 ~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~---~--~~-~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 84 SELMDRMREQSTKFGTEIITET-VSKVDLSS---K--PF-KLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEECSC-EEEEECSS---S--SE-EEEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC---C--EE-EEEEEecCCCcEEEeCEEEECcCCC
Confidence 4577888999999999999999 99998875 3 33 2333111256789999999998753
No 195
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=90.65 E-value=0.35 Score=41.43 Aligned_cols=58 Identities=9% Similarity=0.155 Sum_probs=40.5
Q ss_pred HHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EE---eCCEEEEcCChhHHhh
Q 031284 55 KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VV---QADAYVAACDVPGIKR 115 (162)
Q Consensus 55 ~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~---~aD~VVsa~~~~~~~~ 115 (162)
+..++.|++|++++.|++|.++++.++ +++||++.. .+|+ .+ .++.||.++..-...+
T Consensus 202 ~~~~~~~~~v~~~~~v~~i~~~~~~~~--~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~sp~ 264 (536)
T 1ju2_A 202 NKGNSNNLRVGVHASVEKIIFSNAPGL--TATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIGTPQ 264 (536)
T ss_dssp GGSCTTTEEEEESCEEEEEEECCSSSC--BEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHHHHH
T ss_pred hhhcCCCcEEEeCCEEEEEEECCCCCC--EEEEEEEEe-CCCceEEEEeccCCEEEEcCcccCCHH
Confidence 334678999999999999999852114 789998752 1343 34 5789999998543333
No 196
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=90.64 E-value=0.19 Score=42.36 Aligned_cols=51 Identities=20% Similarity=0.167 Sum_probs=36.5
Q ss_pred HHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-----------------cCCceEEeCCEEEEcCCh
Q 031284 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-----------------ATDKKVVQADAYVAACDV 110 (162)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~-----------------~~~g~~~~aD~VVsa~~~ 110 (162)
.+.+++.|+++++++.+++|.-+ | ++.++++.. ++++.++++|.||.++..
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~~----g--~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTGD----T--VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEEE----E--EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHCCCEEEeCCCceEEeCC----C--cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 56788899999999999999743 4 555444320 112247899999999974
No 197
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=90.29 E-value=0.5 Score=38.98 Aligned_cols=58 Identities=10% Similarity=-0.058 Sum_probs=40.4
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEE--EEEEEecCCce----EEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVK--GLAMSKATDKK----VVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~--gv~~~~~~~g~----~~~aD~VVsa~~~ 110 (162)
..+.+.+....++.|++++++++|++|..+.+ ++ +.. .|.+. +|+ .+.+|.||.|+..
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-~~--~~~~~~V~~~---~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLS-AG--QVEALRVISR---NADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEE-TT--EEEEEEEEEE---ETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecC-CC--ceEEEEEEEe---cCCCceEEEEeCEEEECCCC
Confidence 34556666777778999999999999988621 12 333 33333 333 7899999999874
No 198
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=90.21 E-value=0.64 Score=37.76 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=42.9
Q ss_pred cchHHHHHHHHH-cC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh-HHhhc
Q 031284 48 YLSGPIRKYITD-KG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP-GIKRL 116 (162)
Q Consensus 48 ~l~~~l~~~l~~-~G-g~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~-~~~~L 116 (162)
.|.+.|.+.+++ .| ++|+++++|++|.. ++ + + .+.+....+| +.++||.||.|...+ ...+.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~--~---v-~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~ 174 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RD--G---R-VLIGARDGHGKPQALGADVLVGADGIHSAVRAH 174 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET--T---E-EEEEEEETTSCEEEEEESEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC--c---c-EEEEecCCCCCceEEecCEEEECCCccchhHHH
Confidence 355677777776 47 48999999999988 52 3 3 2444421125 578999999999876 35543
No 199
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.14 E-value=0.78 Score=42.47 Aligned_cols=54 Identities=9% Similarity=0.110 Sum_probs=40.1
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe---cCCc---------eEEeCCEEEEcCCh
Q 031284 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDK---------KVVQADAYVAACDV 110 (162)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~---~~~g---------~~~~aD~VVsa~~~ 110 (162)
.-.+.+++.|+++++++.+++|..++ + ++++|++.. +.+| .+++||.||.++..
T Consensus 375 ~e~~~~~~~Gv~~~~~~~~~~i~~~~---g--~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 375 EEVELAKEEKCEFLPFLSPRKVIVKG---G--RIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEET---T--EEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHHcCCEEEeCCCceEEEccC---C--eEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 44467889999999999999998754 5 677776531 1112 36899999999864
No 200
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=90.11 E-value=0.58 Score=39.25 Aligned_cols=49 Identities=6% Similarity=0.089 Sum_probs=34.3
Q ss_pred cCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--------------cCCceEEeCCEEEEcCChh
Q 031284 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSK--------------ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 60 ~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--------------~~~g~~~~aD~VVsa~~~~ 111 (162)
+|+++++++.+++|.-+++ ++ ++.+|++.. ++.++.+++|.||.++...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~--~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GR--RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SS--SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCC-Cc--eEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 8999999999999976531 12 355665531 1122579999999999853
No 201
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=90.01 E-value=0.29 Score=39.73 Aligned_cols=48 Identities=13% Similarity=0.042 Sum_probs=36.3
Q ss_pred CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH-HhhcC
Q 031284 61 GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (162)
Q Consensus 61 Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~-~~~Ll 117 (162)
+++|+++++|++|..++ + .+ .|++. +|+.++||.||.|...+. ..+.+
T Consensus 140 ~~~i~~~~~v~~i~~~~---~--~v-~v~~~---~g~~~~ad~vV~AdG~~S~vR~~l 188 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGK---K--KW-TLTFE---NKPSETADLVILANGGMSKVRKFV 188 (398)
T ss_dssp TTSEEESCCEEEEEECS---S--SE-EEEET---TSCCEEESEEEECSCTTCSCCTTT
T ss_pred CCEEEECCEEEEEEECC---C--EE-EEEEC---CCcEEecCEEEECCCcchhHHhhc
Confidence 47999999999998876 3 33 35444 677899999999998764 44444
No 202
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=89.87 E-value=0.38 Score=41.87 Aligned_cols=50 Identities=12% Similarity=0.096 Sum_probs=36.5
Q ss_pred HHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeC-CEEEEcCChh
Q 031284 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQA-DAYVAACDVP 111 (162)
Q Consensus 58 ~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~a-D~VVsa~~~~ 111 (162)
.+.+.+|++++.|++|.++.+ ++ +++||++... +|. .+.| ..||+++..-
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~-~~--~a~GV~~~~~-~g~~~~v~A~keVILsaGa~ 269 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEA-DR--TCKGVTVVTA-AGNELNFFADREVILSQGVF 269 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETT-TT--EEEEEEEEET-TSCEEEEEEEEEEEECSHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCC-CC--EEEEEEEEeC-CCcEEEEEeeeEEEEccccc
Confidence 346899999999999999831 15 8999988632 243 4667 4588888743
No 203
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=89.84 E-value=0.82 Score=35.59 Aligned_cols=56 Identities=11% Similarity=0.019 Sum_probs=42.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEec--cCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYD--KAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~--~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|++++. .+|.+|..+ + + ....+.+. +|+.+.+|.+|.|....
T Consensus 65 ~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~---~--~~~~v~~~---~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 65 MELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS---H--PYPFTVRG---YNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS---S--SCCEEEEE---SSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC---C--ceEEEEEC---CCCEEEeCEEEECcCCC
Confidence 35677788888999999998 699999887 4 2 21234455 67789999999998753
No 204
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=89.31 E-value=0.33 Score=42.16 Aligned_cols=52 Identities=8% Similarity=0.035 Sum_probs=37.6
Q ss_pred HHHcCcEEEcCceeeEEEec----cCCCCcceEEEEEEEec-C-CceEEeC-CEEEEcCChhH
Q 031284 57 ITDKGGRFHLRWGCREILYD----KAANAETYVKGLAMSKA-T-DKKVVQA-DAYVAACDVPG 112 (162)
Q Consensus 57 l~~~Gg~i~~~~~V~~I~~~----~~~~~~~~v~gv~~~~~-~-~g~~~~a-D~VVsa~~~~~ 112 (162)
+.+.+.+|++++.|++|.++ ++ + +++||++... + ....+.| ..||+++..-.
T Consensus 218 ~~r~NL~Vlt~a~V~rIl~~~~~~g~--~--rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 218 QSRPNLSVLINAQVTKLVNSGTTNGL--P--AFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp TTCTTEEEESSCEEEEEECCEEETTE--E--ECCEEEEESSTTSCCEEEEEEEEEEECCHHHH
T ss_pred ccCCCeEEECCCEEEEEEeecCCCCC--C--EEEEEEEEECCCceEEEEEeeeEEEEecCCcC
Confidence 35679999999999999998 31 4 7999988632 1 1235677 56888887533
No 205
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.20 E-value=1.1 Score=38.63 Aligned_cols=63 Identities=16% Similarity=0.101 Sum_probs=41.5
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEEEec------cCCCCcceEEEEEEEecCCceEEe--CCEEEEcCChh
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYD------KAANAETYVKGLAMSKATDKKVVQ--ADAYVAACDVP 111 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~------~~~~~~~~v~gv~~~~~~~g~~~~--aD~VVsa~~~~ 111 (162)
++..+.+.+.+.++++|+++++++.|++|.-. ++..+ ++ .+.... .+|+.+. +|.||.++...
T Consensus 324 ~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~--~~-~v~~~~-~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 324 FDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPG--LL-LVKGHY-TDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCC--EE-EEEEEE-TTSCEEEEEESEEEECSCEE
T ss_pred CCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCc--eE-EEEEEe-CCCcEEeccCCEEEEEeCCc
Confidence 34567888889999999999999988888531 11012 22 122211 1565554 99999999853
No 206
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=89.11 E-value=1.3 Score=36.20 Aligned_cols=62 Identities=8% Similarity=0.149 Sum_probs=45.5
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEeccC----------------CCCcceEEEEEEEe-----cC------CceEE
Q 031284 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKA----------------ANAETYVKGLAMSK-----AT------DKKVV 99 (162)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~I~~~~~----------------~~~~~~v~gv~~~~-----~~------~g~~~ 99 (162)
.+.+.|.+.+++ .|++++.+++|+++..+++ +.. ++.||++.. .+ +...+
T Consensus 161 d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~--rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 161 LFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKV--RIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCE--EEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCc--eEeEEEeeeeeeeccCCcccccCceEE
Confidence 456788888888 5999999999999988751 012 678887641 11 23579
Q ss_pred eCCEEEEcCChh
Q 031284 100 QADAYVAACDVP 111 (162)
Q Consensus 100 ~aD~VVsa~~~~ 111 (162)
+|+.||.|....
T Consensus 239 ~Ak~VV~ATG~~ 250 (344)
T 3jsk_A 239 NAPVIISTTGHD 250 (344)
T ss_dssp ECSEEEECCCSS
T ss_pred EcCEEEECCCCC
Confidence 999999998754
No 207
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=89.10 E-value=0.46 Score=39.93 Aligned_cols=53 Identities=17% Similarity=0.079 Sum_probs=39.7
Q ss_pred HcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhHHhhc
Q 031284 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL 116 (162)
Q Consensus 59 ~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~~~~L 116 (162)
+.+.+|.+++.|.+|..++ + +++||.....+....+.|+.||+++..-...+|
T Consensus 223 r~nl~v~~~~~v~~i~~~~---~--~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~L 275 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG---N--QVRSLEVVGRQGSAEVFADQIVLCAGALESPAL 275 (526)
T ss_dssp CTTEEEECSCEEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECSHHHHHHHH
T ss_pred CCCeEEEeCCEEEEEEecC---C--eEEEEEEEecCceEEEeecceEEcccccCCcch
Confidence 4578999999999999987 5 899998753322246789999999985443343
No 208
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=88.95 E-value=0.39 Score=41.71 Aligned_cols=51 Identities=12% Similarity=0.083 Sum_probs=37.3
Q ss_pred HHcCcEEEcCceeeEEEeccCC-CCcceEEEEEEEecCCce--EEeC-CEEEEcCChh
Q 031284 58 TDKGGRFHLRWGCREILYDKAA-NAETYVKGLAMSKATDKK--VVQA-DAYVAACDVP 111 (162)
Q Consensus 58 ~~~Gg~i~~~~~V~~I~~~~~~-~~~~~v~gv~~~~~~~g~--~~~a-D~VVsa~~~~ 111 (162)
++.|.+|++++.|++|.++++. ++ +++||+.... +|+ .+.| +.||+++..-
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~--~~~GV~~~~~-~g~~~~v~A~k~VILaaG~~ 296 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGP--QAVGVNFGTN-KAVNFDVFAKHEVLLAAGSA 296 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEE--EEEEEEEEEE-TTEEEEEEEEEEEEECSCTT
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCC--EEEEEEEEeC-CCcEEEEEecccEEEccCCC
Confidence 4678999999999999997420 13 7899987511 344 5678 8899998853
No 209
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=88.28 E-value=0.91 Score=37.47 Aligned_cols=46 Identities=15% Similarity=0.069 Sum_probs=37.2
Q ss_pred HHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.+++.|++++++++|+.|..++ . .|.+. +|+.+++|.+|.|+..
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~~~---~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRDR---Q-----QVILS---DGRALDYDRLVLATGG 112 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEcCCC
Confidence 567788999999999999998764 2 24554 6778999999999875
No 210
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=88.26 E-value=0.92 Score=35.01 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=40.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+.+.+.+.+++.|+++++++ |+.|..++ + .+ .+ +. +++.+.+|.+|.|+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~---~--~~-~v-~~---~~~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 62 PLLMERMHEHATKFETEIIFDH-INKVDLQN---R--PF-RL-NG---DNGEYTCDALIIATGA 114 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEECSS---S--SE-EE-EE---SSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEEee-eeEEEecC---C--EE-EE-Ee---CCCEEEcCEEEECCCC
Confidence 4567778888899999999997 99998765 3 22 23 44 5778999999999874
No 211
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=88.06 E-value=2.1 Score=34.62 Aligned_cols=64 Identities=9% Similarity=0.127 Sum_probs=44.5
Q ss_pred cchHHHHHHHHHc-CcEEEcCceeeEEEeccCCC-CcceEEEEEEEe-----cC------CceEEeC-------------
Q 031284 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAAN-AETYVKGLAMSK-----AT------DKKVVQA------------- 101 (162)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~-~~~~v~gv~~~~-----~~------~g~~~~a------------- 101 (162)
.+.+.+.+.+++. |++++.+++|+++..+++.+ |..++.||++.. ++ ++..+.|
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~ 226 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQ 226 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSST
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccc
Confidence 4567778877775 99999999999999874101 101578887641 11 3457899
Q ss_pred --CEEEEcCChh
Q 031284 102 --DAYVAACDVP 111 (162)
Q Consensus 102 --D~VVsa~~~~ 111 (162)
|.||.|+...
T Consensus 227 ~~~~VV~ATG~~ 238 (326)
T 2gjc_A 227 KHGVILSTTGHD 238 (326)
T ss_dssp TCCEEEECCCCC
T ss_pred cCCEEEECcCCC
Confidence 9999999743
No 212
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=88.05 E-value=0.57 Score=37.33 Aligned_cols=55 Identities=7% Similarity=0.072 Sum_probs=39.5
Q ss_pred HHHHHH-HcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH-Hhh
Q 031284 53 IRKYIT-DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKR 115 (162)
Q Consensus 53 l~~~l~-~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~-~~~ 115 (162)
+.+.|. ..+.+|+++++|++++..++ + .+ .+++. ||+.++||.||-|=..+. ..+
T Consensus 114 L~~~L~~~~~~~v~~~~~v~~~~~~~~--~--~v-~v~~~---dG~~~~adlvVgADG~~S~vR~ 170 (412)
T 4hb9_A 114 LKEILNKGLANTIQWNKTFVRYEHIEN--G--GI-KIFFA---DGSHENVDVLVGADGSNSKVRK 170 (412)
T ss_dssp HHHHHHTTCTTTEECSCCEEEEEECTT--S--CE-EEEET---TSCEEEESEEEECCCTTCHHHH
T ss_pred HHHHHHhhccceEEEEEEEEeeeEcCC--C--eE-EEEEC---CCCEEEeeEEEECCCCCcchHH
Confidence 444443 35789999999999987653 4 33 45455 889999999998877763 444
No 213
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=87.78 E-value=0.79 Score=35.69 Aligned_cols=54 Identities=22% Similarity=0.194 Sum_probs=41.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|+++++++ |.+|..++ + .+ .|.+ +|+.+++|.||.|....
T Consensus 70 ~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~---~--~~-~v~~----~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 70 VELTDKFRKQSERFGTTIFTET-VTKVDFSS---K--PF-KLFT----DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-CCEEECSS---S--SE-EEEC----SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEEeE-EEEEEEcC---C--EE-EEEE----CCcEEEcCEEEECCCCC
Confidence 3567788888899999999997 99998765 2 22 2332 47789999999998864
No 214
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=87.01 E-value=0.92 Score=35.57 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=40.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEE-EEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGL-AMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv-~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++.|+++++++ |.+|.. + + . ..| .+. +|+.+.+|.+|.|....
T Consensus 71 ~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~---~--~-~~v~~~~---~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 71 PELMDEMREQALRFGADLRMED-VESVSL-H---G--P-LKSVVTA---DGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEEC-S---S--S-SEEEEET---TSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEEee-EEEEEe-C---C--c-EEEEEeC---CCCEEEeCEEEECCCCC
Confidence 3567778888889999999998 999987 3 2 2 233 343 57789999999998753
No 215
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=86.88 E-value=0.71 Score=37.33 Aligned_cols=48 Identities=17% Similarity=0.117 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
....+.+++.|++++++++|+.|..++ . . |. . +|+.+++|.+|.|+..
T Consensus 64 ~~~~~~~~~~~v~~~~g~~v~~id~~~---~--~---V~-~---~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 64 PYSLDWYRKRGIEIRLAEEAKLIDRGR---K--V---VI-T---EKGEVPYDTLVLATGA 111 (367)
T ss_dssp SSCHHHHHHHTEEEECSCCEEEEETTT---T--E---EE-E---SSCEEECSEEEECCCE
T ss_pred cCCHHHHHhCCcEEEECCEEEEEECCC---C--E---EE-E---CCcEEECCEEEECCCC
Confidence 345667788999999999999997764 2 2 33 3 5778999999999874
No 216
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=86.76 E-value=0.58 Score=41.61 Aligned_cols=26 Identities=8% Similarity=-0.133 Sum_probs=22.5
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEe
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILY 75 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~ 75 (162)
.+.+.+.+++.|++++++++|++|.-
T Consensus 574 ~~~~~~~l~~~GV~i~~~~~v~~i~~ 599 (729)
T 1o94_A 574 YPNMMRRLHELHVEELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEET
T ss_pred HHHHHHHHHhCCCEEEcCcEEEEEEC
Confidence 35678888999999999999999953
No 217
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=86.11 E-value=0.6 Score=40.10 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=38.1
Q ss_pred HHHHHHHHHcCcEEEc--CceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 51 GPIRKYITDKGGRFHL--RWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~--~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
....+.+.+.+++++. +++|++|..+ ||+++ +| .+++|.||+|+.+..
T Consensus 342 ~~y~~al~~~nV~lv~~~~~~I~~it~~----------gv~~~---dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 342 TNYYETYNRDNVHLVDIREAPIQEVTPE----------GIKTA---DA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp SSHHHHTTSTTEEEEETTTSCEEEEETT----------EEEES---SC-EEECSEEEECCCCBS
T ss_pred ccHHHHhcCCCEEEEecCCCCceEEccC----------eEEeC---CC-eeecCEEEECCcccc
Confidence 3455667778999997 8999998532 46676 78 999999999999875
No 218
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=86.06 E-value=1.2 Score=36.38 Aligned_cols=47 Identities=13% Similarity=0.084 Sum_probs=37.5
Q ss_pred HHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+++.|++++++++|+.|..++ . .|.+. +|+.+.+|.+|.|+...
T Consensus 64 ~~~~~~~~i~~~~~~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 64 ADWYGEARIDMLTGPEVTALDVQT---R-----TISLD---DGTTLSADAIVIATGSR 110 (410)
T ss_dssp TTHHHHTTCEEEESCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCEE
T ss_pred HHHHHHCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEccCCc
Confidence 456788999999999999998764 2 24455 67889999999998743
No 219
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=85.75 E-value=0.3 Score=40.38 Aligned_cols=52 Identities=17% Similarity=0.104 Sum_probs=40.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+..++.+.+++.|++++.+ +|++|..++ + + |.+. +|+.+++|++|.|+...
T Consensus 57 ~i~~~~~~~~~~~gv~~i~~-~v~~Id~~~---~--~---V~~~---~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 57 DISVPLAPLLPKFNIEFINE-KAESIDPDA---N--T---VTTQ---SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GSEEESTTTGGGGTEEEECS-CEEEEETTT---T--E---EEET---TCCEEECSEEEECCCCE
T ss_pred HhhhcHHHHHHHCCcEEEEe-EEEEEECCC---C--E---EEEC---CCCEEECCEEEEeCCCC
Confidence 34455667778899999876 799998876 3 2 4565 78899999999999864
No 220
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=85.58 E-value=1.4 Score=33.44 Aligned_cols=55 Identities=9% Similarity=-0.072 Sum_probs=40.2
Q ss_pred ccchHHHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.+++. |++++ +++|++|..++ + . ..+.+. +|+.+.+|.+|.|+...
T Consensus 56 ~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~---~--~-~~v~~~---~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 56 GEIIAEARRQIERYPTIHWV-EGRVTDAKGSF---G--E-FIVEID---GGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHHTTCTTEEEE-ESCEEEEEEET---T--E-EEEEET---TSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC---C--e-EEEEEC---CCCEEEcCEEEECCCCC
Confidence 35677788888887 56665 56999998875 2 2 345454 67789999999998754
No 221
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=85.44 E-value=1.5 Score=36.50 Aligned_cols=56 Identities=11% Similarity=0.025 Sum_probs=36.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCChh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~~ 111 (162)
..+.+.+.+.++ ++++++++|++|..+++ + ++ .+.+.. .+|+ .+++|.||.++...
T Consensus 214 ~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~--~--~v-~v~~~~-~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 214 QDIVNTLLSILK---LNIKFNSPVTEVKKIKD--D--EY-EVIYST-KDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHHC---CCEECSCCEEEEEEEET--T--EE-EEEECC-TTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHHhcCE---EEEEECCEEEEEEEcCC--C--cE-EEEEEe-cCCceEEEEcCEEEECcCCC
Confidence 344455555444 99999999999987641 2 33 244431 1344 79999999999853
No 222
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=83.67 E-value=1.8 Score=35.87 Aligned_cols=53 Identities=11% Similarity=0.027 Sum_probs=36.9
Q ss_pred HHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
-.+..++.|++++++++|++|..+. + .+ .+....+.++..+.+|.+|.|+...
T Consensus 63 ~~~~~~~~~i~~~~~~~V~~id~~~---~--~~-~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 63 PEKFYDRKQITVKTYHEVIAINDER---Q--TV-SVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHHHHHCCEEEETEEEEEEETTT---T--EE-EEEETTTTEEEEEECSEEEECCCEE
T ss_pred HHHHHHhcCCEEEeCCeEEEEEccC---c--EE-EEEeccCCceEEEEcCEEEECCCCc
Confidence 3466788999999999999998775 2 22 2222222234568899999998753
No 223
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=83.48 E-value=2.4 Score=32.80 Aligned_cols=53 Identities=8% Similarity=-0.031 Sum_probs=40.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+.+++.|++++. .+|++|..++ + .+ .|.+ +++.+.+|.+|.|....
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~--~~-~v~~----~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQ---G--GF-DIET----NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEET---T--EE-EEEE----SSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeC---C--EE-EEEE----CCCEEEeCEEEECCCCC
Confidence 4667788888889999999 7999998875 2 22 2433 36688999999998753
No 224
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=83.32 E-value=0.72 Score=39.58 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=33.8
Q ss_pred HHHcCcEEEc--CceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 57 ITDKGGRFHL--RWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 57 l~~~Gg~i~~--~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
+.+.++++.. +++|++|.-+ ||+++ +|+.+++|.||+|+....
T Consensus 340 l~~~nV~lv~~~~~~I~~it~~----------gv~~~---dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 340 YNRPNVEAVAIKENPIREVTAK----------GVVTE---DGVLHELDVLVFATGFDA 384 (540)
T ss_dssp GGSTTEEEEETTTSCEEEECSS----------EEEET---TCCEEECSEEEECCCBSC
T ss_pred hcCCCEEEEeCCCCCccEEecC----------eEEcC---CCCEEECCEEEECCccCc
Confidence 3456889886 8899998432 47776 888999999999998763
No 225
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=83.20 E-value=1 Score=36.47 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=39.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce----EEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~----~~~aD~VVsa~~~ 110 (162)
+.+...+.+.+++.|++++.+ +|+++..++ + .|.+. +++ .+++|.+|.|+..
T Consensus 56 ~~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~---~-----~V~~~---~g~~~~~~~~~d~lViAtG~ 111 (409)
T 3h8l_A 56 DELKVDLSEALPEKGIQFQEG-TVEKIDAKS---S-----MVYYT---KPDGSMAEEEYDYVIVGIGA 111 (409)
T ss_dssp CCEEEEHHHHTGGGTCEEEEC-EEEEEETTT---T-----EEEEE---CTTSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhhCCeEEEEe-eEEEEeCCC---C-----EEEEc---cCCcccceeeCCEEEECCCC
Confidence 446677889999999999988 999998765 2 24454 333 4899999999875
No 226
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=82.96 E-value=2.9 Score=34.42 Aligned_cols=50 Identities=6% Similarity=0.087 Sum_probs=37.3
Q ss_pred HHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+.+++.|++++++++|++|..++ + .+ .+. ..++++.+.+|.+|.|+..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~---~--~v-~v~--~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVEN---Q--LI-AWT--RKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTT---T--EE-EEE--ETTEEEEEECSEEEECCCC
T ss_pred CHHHHHHCCCEEEECCEEEEEECCC---C--EE-EEE--ecCceEEEEcCEEEECCCc
Confidence 4567788999999999999998875 3 22 222 1224678999999998764
No 227
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=82.76 E-value=14 Score=28.08 Aligned_cols=57 Identities=12% Similarity=0.026 Sum_probs=41.5
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEE--ecCCceEEeCCEEEEcCChh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMS--KATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~--~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+...+.....+.+.+.++.+.++.-.+ + ...++++. ...+++.+++|.|+.++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~--~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 191 KTMQERVLNHPKIEVIWNSELVELEGDG---D--LLNGAKIHNLVSGEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESS---S--SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred chhhhhhhcccceeeEeeeeeEEEEeee---e--ccceeEEeecccccceeeccccceEecccc
Confidence 3445566677789999999999998765 3 45666654 23356789999999999853
No 228
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=82.70 E-value=1.9 Score=35.11 Aligned_cols=51 Identities=10% Similarity=0.038 Sum_probs=40.0
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+.....+.+++.|++++++++|++|..++ . .|.+. +|+.+.+|.+|.|+..
T Consensus 67 ~~~~~~~~~~~~~i~~~~~~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 67 ICIRPAQFWEDKAVEMKLGAEVVSLDPAA---H-----TVKLG---DGSAIEYGKLIWATGG 117 (415)
T ss_dssp GBSSCHHHHHHTTEEEEETCCEEEEETTT---T-----EEEET---TSCEEEEEEEEECCCE
T ss_pred hccCCHHHHHHCCcEEEeCCEEEEEECCC---C-----EEEEC---CCCEEEeeEEEEccCC
Confidence 44455678889999999999999997764 2 24455 6788999999999863
No 229
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=82.67 E-value=2.6 Score=35.95 Aligned_cols=60 Identities=13% Similarity=0.172 Sum_probs=41.3
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChhH-HhhcC
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~~-~~~Ll 117 (162)
+-+.|.+.+++. |+++++|++|+.++ + .++ +++....+| +.++||.||.|-..+. ..+.+
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~---~--~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRD---D--HVR-ATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECS---S--CEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeC---C--EEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 445666777666 99999999999876 3 343 444421124 5799999999988763 55544
No 230
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=81.52 E-value=1.8 Score=35.68 Aligned_cols=54 Identities=9% Similarity=0.149 Sum_probs=38.5
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCCh
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDV 110 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~ 110 (162)
+...+.+.+++.|++++++++|..|..++ + . +.+.. ++.++.+++|.+|.|+..
T Consensus 60 ~~~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~---v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 60 LFYSSPEELSNLGANVQMRHQVTNVDPET---K--T---IKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp GBSCCHHHHHHTTCEEEESEEEEEEEGGG---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hhhcCHHHHHHcCCEEEeCCEEEEEEcCC---C--E---EEEEecCCCceEEEECCEEEEccCC
Confidence 33345667788999999999999998765 3 2 33431 112567999999999874
No 231
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=81.18 E-value=2.3 Score=34.87 Aligned_cols=51 Identities=24% Similarity=0.353 Sum_probs=39.2
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+...+.+.+++.|++++ ..+|++|..++ + .|.+. +|+.+.+|.+|.|+...
T Consensus 61 ~~~~l~~~~~~~gv~~~-~~~v~~id~~~---~-----~V~~~---~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 61 IAFPIRHYVERKGIHFI-AQSAEQIDAEA---Q-----NITLA---DGNTVHYDYLMIATGPK 111 (437)
T ss_dssp HEEECHHHHHTTTCEEE-CSCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCCE
T ss_pred HHHHHHHHHHHCCCEEE-EeEEEEEEcCC---C-----EEEEC---CCCEEECCEEEECCCCC
Confidence 44456788888999998 46999998765 2 24555 67789999999999864
No 232
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=80.39 E-value=2.3 Score=36.32 Aligned_cols=54 Identities=7% Similarity=0.034 Sum_probs=39.8
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
+...+....++.|++++++++|++|..++ + . +.+....+|+ .+.+|.+|.|+..
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~---~--~---v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE---K--T---ITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC---C--E---EEEeecCCCCEEEEeCCEEEECCCC
Confidence 55667778889999999999999998875 3 2 2332111344 7899999999874
No 233
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=80.21 E-value=4.1 Score=33.98 Aligned_cols=52 Identities=15% Similarity=0.116 Sum_probs=37.4
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
....+.+++.|++++++++|..|..++ + .+ .+..+++++.+++|.+|.|+..
T Consensus 96 ~~~~~~~~~~gv~v~~~~~v~~i~~~~---~--~v---~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 96 YSDKEELESLGAKVYMESPVQSIDYDA---K--TV---TALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp SCCHHHHHHTTCEEETTCCEEEEETTT---T--EE---EEEETTEEEEEECSEEEECCCE
T ss_pred hcCHHHHHhCCCEEEeCCEEEEEECCC---C--EE---EEEeCCcEEEEECCEEEECCCC
Confidence 344667788999999999999998765 3 32 3321212457999999999874
No 234
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=80.05 E-value=1.9 Score=35.13 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=34.8
Q ss_pred HHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+++.|++++++++|+.|..++ . .|.+. +|+.+++|.+|.|+..
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~~---~-----~v~~~---~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQA---H-----TVALS---DGRTLPYGTLVLATGA 111 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred HHHHCCCEEEcCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEECCCC
Confidence 3567899999999999997764 2 24454 6778999999999875
No 235
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=79.97 E-value=2.5 Score=34.66 Aligned_cols=37 Identities=11% Similarity=0.121 Sum_probs=28.6
Q ss_pred eeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEeccC
Q 031284 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKA 78 (162)
Q Consensus 37 ~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~ 78 (162)
.+.+.+| . +.|++.|++.+ +.+|++|++|++|..+++
T Consensus 312 ~~~i~GG-~-~~l~~~l~~~l---~~~i~l~~~V~~I~~~~~ 348 (376)
T 2e1m_A 312 YWEIEGG-S-RMLPETLAKDL---RDQIVMGQRMVRLEYYDP 348 (376)
T ss_dssp EEEETTC-T-THHHHHHHHHG---GGTEECSEEEEEEEECCC
T ss_pred eEEECCc-H-HHHHHHHHHhc---CCcEEecCeEEEEEECCC
Confidence 4445555 3 47999999887 578999999999998763
No 236
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=79.40 E-value=2.6 Score=35.66 Aligned_cols=54 Identities=4% Similarity=-0.020 Sum_probs=37.6
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCceEEeCCEEEEcCCh
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDV 110 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g~~~~aD~VVsa~~~ 110 (162)
+...+..+.++.|++++++++|++|..++ + . +.+.. +++...+.+|++|.|+..
T Consensus 60 ~~~~~~~~~~~~~i~~~~~~~V~~id~~~---~--~---v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 60 VLQTPESFKARFNVEVRVKHEVVAIDRAA---K--L---VTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp BCCCHHHHHHHHCCEEETTEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC---C--E---EEEEecCCCCeEEEECCEEEECCCC
Confidence 44445556666899999999999998775 3 2 23331 112347899999999875
No 237
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=78.06 E-value=2.7 Score=34.56 Aligned_cols=54 Identities=7% Similarity=0.014 Sum_probs=37.8
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
+.....+.+++.|++++++++|..|..++ + . |.+....+|+ .+++|.+|.|+..
T Consensus 58 ~~~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~---v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 58 VRYMTGEKMESRGVNVFSNTEITAIQPKE---H--Q---VTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp SBSCCHHHHHHTTCEEEETEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hhcCCHHHHHHCCCEEEECCEEEEEeCCC---C--E---EEEEecCCCceEEEeCCEEEEcCCC
Confidence 33345567788999999999999998775 3 2 3343211344 4899999999874
No 238
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=76.96 E-value=5 Score=32.41 Aligned_cols=51 Identities=14% Similarity=0.027 Sum_probs=39.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.....+.+++.|+++++ ++|++|..++ + .+.+. +|+.+.+|.+|.|+..
T Consensus 58 ~~~~~~~~~~~~~~i~~~~-~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 58 SLMFRPEKFFQDQAIELIS-DRMVSIDREG---R-----KLLLA---SGTAIEYGHLVLATGA 108 (404)
T ss_dssp SSBSSCHHHHHHTTEEEEC-CCEEEEETTT---T-----EEEES---SSCEEECSEEEECCCE
T ss_pred HccCCCHHHHHhCCCEEEE-EEEEEEECCC---C-----EEEEC---CCCEEECCEEEEeeCC
Confidence 3444566778899999999 9999998765 2 24555 6788999999999874
No 239
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=76.10 E-value=1.9 Score=36.93 Aligned_cols=44 Identities=9% Similarity=-0.033 Sum_probs=33.8
Q ss_pred HHHHHcCcEEE--cCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 55 KYITDKGGRFH--LRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 55 ~~l~~~Gg~i~--~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
+.+.+.++++. ..++|++|..+ ||++. +| .+++|.||+|+.+..
T Consensus 351 ~al~~~~V~lvd~~~~~I~~it~~----------gv~~~---dG-~~~~D~iI~ATGf~~ 396 (549)
T 4ap3_A 351 ETYNRDNVELVDLRSTPIVGMDET----------GIVTT---GA-HYDLDMIVLATGFDA 396 (549)
T ss_dssp GGGGSTTEEEEETTTSCEEEEETT----------EEEES---SC-EEECSEEEECCCEEE
T ss_pred HHhcCCCEEEEeCCCCCceEEeCC----------cEEeC---CC-ceecCEEEECCcccc
Confidence 44556689987 46899998542 46676 78 999999999999764
No 240
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=76.06 E-value=4.8 Score=30.98 Aligned_cols=55 Identities=7% Similarity=-0.082 Sum_probs=39.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.+.+.+.+++.++..+.+..|..+...++ + ...+.+. +|+.+++|++|.|+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~v~~~---~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 61 EFKEIGLNEVMKYPSVHYYEKTVVMITKQST--G---LFEIVTK---DHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHHTTSTTEEEEECCEEEEEECTT--S---CEEEEET---TCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCEEEEeeEEEEeeecCC--C---cEEEEEC---CCCEEEeCEEEEccCC
Confidence 4556666777778877777777877766542 3 2344444 7889999999999874
No 241
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=75.02 E-value=6.2 Score=31.58 Aligned_cols=46 Identities=11% Similarity=-0.024 Sum_probs=35.4
Q ss_pred HHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+.+.+++.|++++++++|+.|..++ . . |.+. ++.+++|.+|.|+..
T Consensus 66 ~~~~~~~~~v~~~~~~~v~~i~~~~---~--~---v~~~----~~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 66 PGAMAEQLNARILTHTRVTGIDPGH---Q--R---IWIG----EEEVRYRDLVLAWGA 111 (384)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEGGG---T--E---EEET----TEEEECSEEEECCCE
T ss_pred HHHHHHhCCcEEEeCCEEEEEECCC---C--E---EEEC----CcEEECCEEEEeCCC
Confidence 4556688999999999999998764 2 2 4443 457899999999875
No 242
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=74.73 E-value=3.1 Score=34.24 Aligned_cols=44 Identities=20% Similarity=0.142 Sum_probs=32.4
Q ss_pred HHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc-eEEeCCEEEEcCCh
Q 031284 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (162)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g-~~~~aD~VVsa~~~ 110 (162)
+.++.|++++++++|++|..++ ..+.+. ++ ..+.+|.+|.|+..
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~~~--------~~v~~~---~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDTGY--------VRVREN---GGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHHHTTCEEETTCEEEEECSSE--------EEEECS---SSEEEEECSEEEECCCE
T ss_pred HHHhcCcEEEecCEEEEEecCC--------CEEEEC---CceEEEEcCEEEECCCC
Confidence 3478999999999999995542 123333 45 47899999999874
No 243
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=73.37 E-value=2.7 Score=35.30 Aligned_cols=41 Identities=7% Similarity=-0.009 Sum_probs=33.1
Q ss_pred HcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 59 ~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+.|++++++++|.+|..++ . .|.+. +|+.+.+|.+|.|+..
T Consensus 102 ~~gv~~~~g~~v~~id~~~---~-----~V~~~---~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD---N-----MVKLN---DGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG---T-----EEEET---TSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEECCCC
Confidence 5799999999999998765 2 24555 6888999999998863
No 244
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=72.02 E-value=5.1 Score=33.35 Aligned_cols=49 Identities=16% Similarity=0.120 Sum_probs=34.2
Q ss_pred HHHHH-HcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 54 RKYIT-DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 54 ~~~l~-~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
.+.+. +.|++++++++|+.|..++ + . +.+....+|+ .+.+|.+|.|+..
T Consensus 99 ~~~~~~~~gv~~~~~~~v~~i~~~~---~--~---v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 99 VKTFRDKYGIDAKVRHEVTKVDTEK---K--I---VYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp HHHHHHTTCCEEESSEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHhhcCCEEEeCCEEEEEECCC---C--E---EEEEEcCCCceEEEEcCEEEECCCC
Confidence 44554 4599999999999998765 3 2 3333211355 7899999999874
No 245
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=71.44 E-value=8.1 Score=31.70 Aligned_cols=50 Identities=10% Similarity=0.055 Sum_probs=34.1
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc-eEEeCCEEEEcCCh
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g-~~~~aD~VVsa~~~ 110 (162)
+.+.+.+.+++.|++++.++.+. + +. + . ..+.+. +| +.+++|.+|.|+..
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~-i--d~---~--~-v~V~~~---~G~~~i~~d~lViATGs 143 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF-V--DA---N--T-VRVVNG---DSAQTYTFKNAIIATGS 143 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE-E--ET---T--E-EEEEET---TEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE-c--cC---C--e-EEEEeC---CCcEEEEeCEEEEecCC
Confidence 33445677788999999999764 3 43 2 2 233333 45 67899999999874
No 246
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=71.35 E-value=7.3 Score=34.13 Aligned_cols=29 Identities=10% Similarity=0.000 Sum_probs=24.4
Q ss_pred chHHHHHHHHHcC---cEEEcCceeeEEEecc
Q 031284 49 LSGPIRKYITDKG---GRFHLRWGCREILYDK 77 (162)
Q Consensus 49 l~~~l~~~l~~~G---g~i~~~~~V~~I~~~~ 77 (162)
+-+.|.+.+++.| ++|+++++|++++.++
T Consensus 121 le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 121 IERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 4467788888887 8999999999998874
No 247
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=70.78 E-value=6.9 Score=29.66 Aligned_cols=55 Identities=13% Similarity=0.205 Sum_probs=39.0
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+.+.+.+.+++.|++++++ +|.++ .+++ .+ +. .+.+.. ++ .+.+|.+|.|+..
T Consensus 62 ~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~-~~--~~-~v~~~~--~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNS-DG--SF-TIKLEG--GK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHTTTCCEEECC-CEEEE-EECT-TS--CE-EEEETT--SC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCC-CC--cE-EEEEec--CC-EEEeCEEEEeeCC
Confidence 457788888889999999999 99999 6541 01 22 221321 34 8899999999875
No 248
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=70.59 E-value=8.9 Score=30.62 Aligned_cols=44 Identities=16% Similarity=0.047 Sum_probs=33.6
Q ss_pred HHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+.+.|++++.+ +|++|..++ + . +.+. +|+++.+|.+|.|+...
T Consensus 64 ~~~~~gv~~i~~-~v~~id~~~---~--~---v~~~---~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 64 GLRAHGIQVVHD-SALGIDPDK---K--L---VKTA---GGAEFAYDRCVVAPGID 107 (401)
T ss_dssp HHHHTTCEEECS-CEEEEETTT---T--E---EEET---TSCEEECSEEEECCCEE
T ss_pred HHHHCCCEEEEe-EEEEEEccC---c--E---EEec---ccceeecceeeeccCCc
Confidence 456789999765 799998875 2 2 4455 78899999999999854
No 249
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=70.21 E-value=5.5 Score=32.93 Aligned_cols=50 Identities=10% Similarity=0.004 Sum_probs=29.6
Q ss_pred HHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
...+.++.|++++++++|++|..++ + . +.+....+|+ .+.+|.+|.|+..
T Consensus 72 ~~~~~~~~gi~~~~~~~V~~id~~~---~--~---v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 72 PEFFRINKDVEALVETRAHAIDRAA---H--T---VEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---------CEEECSEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHhhhcCcEEEECCEEEEEECCC---C--E---EEEeecCCCCEEEEECCEEEEeCCC
Confidence 3333346899999999999998775 3 2 3333111244 7899999999874
No 250
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=70.12 E-value=1.8 Score=35.48 Aligned_cols=52 Identities=17% Similarity=0.109 Sum_probs=38.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
.+...+.+.+++.|++++.+ +|++|..++ + .|.+. +++.+.+|.+|.|+...
T Consensus 57 ~~~~~~~~~~~~~gv~~~~~-~v~~id~~~---~-----~v~~~---~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 57 DISVPLAPLLPKFNIEFINE-KAESIDPDA---N-----TVTTQ---SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GSEEESTTTGGGGTEEEECS-CEEEEETTT---T-----EEEET---TCCEEECSEEEECCCCE
T ss_pred HHHHHHHHHHHhcCCEEEEE-EEEEEECCC---C-----EEEEC---CCcEEECCEEEEcCCcc
Confidence 34455667778899999975 999997764 2 24454 67789999999998753
No 251
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=69.29 E-value=9.1 Score=32.15 Aligned_cols=64 Identities=8% Similarity=-0.055 Sum_probs=41.0
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCC--CcceEEEEEEEec--CCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAAN--AETYVKGLAMSKA--TDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~--~~~~v~gv~~~~~--~~g~~~~aD~VVsa~~~ 110 (162)
..+.+-+..+.++.+-.|++|++|+++.....+. +......|++... +..+++.|++||+++..
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 3466667777777888899999999998754210 1001233444322 12346889999999883
No 252
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=67.85 E-value=1.1 Score=35.36 Aligned_cols=44 Identities=16% Similarity=0.065 Sum_probs=33.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
.+...+.+.++++|++|+. ++|++|..++ .+.||.||.|+....
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--------------------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA--------------------REGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--------------------HTTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--------------------cCCCCEEEECCCcCh
Confidence 5678899999999999998 8888763321 146888888888765
No 253
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=65.26 E-value=9.9 Score=31.25 Aligned_cols=50 Identities=12% Similarity=0.054 Sum_probs=34.3
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+++.|++++.++.+. .+. + .+ .+.+. +| +.+++|.+|.|....
T Consensus 94 ~~~l~~~~~~~gv~~~~g~~~~---id~---~--~v-~V~~~---~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 94 VAGVHFLMKKNKITEIHGYGTF---ADA---N--TL-LVDLN---DGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp HHHHHHHHHHTTCEEECEEEEE---SSS---S--EE-EEEET---TSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhCCCEEEEeEEEE---ecC---C--eE-EEEeC---CCceEEEEcCEEEECCCCC
Confidence 3445677888999999998764 343 2 22 33333 56 689999999998753
No 254
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=62.96 E-value=11 Score=30.96 Aligned_cols=50 Identities=10% Similarity=0.113 Sum_probs=33.7
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCChh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~~ 111 (162)
.+.+.+.+++.|++++.++.+. ++. + .+ .|.+. +| +.+++|.+|.|....
T Consensus 99 ~~~~~~~~~~~gv~~~~g~~~~---~~~---~--~~-~v~~~---~G~~~~i~~d~lIiAtGs~ 150 (470)
T 1dxl_A 99 TRGIEGLFKKNKVTYVKGYGKF---VSP---S--EI-SVDTI---EGENTVVKGKHIIIATGSD 150 (470)
T ss_dssp HHHHHHHHHHHTCEEEESCEEE---EET---T--EE-EECCS---SSCCEEEECSEEEECCCEE
T ss_pred HHHHHHHHHhCCCEEEEeEEEE---ecC---C--EE-EEEeC---CCceEEEEcCEEEECCCCC
Confidence 3345667788999999999764 343 2 22 23222 45 689999999998753
No 255
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=62.29 E-value=8.3 Score=32.24 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=31.5
Q ss_pred HcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 59 ~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
+.|++++++++|.+|..++ + .+...... +++ .+.+|.+|.|+..
T Consensus 172 ~~~v~~~~~~~v~~i~~~~---~--~~~~~~~~---~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKG---E--YFLVPVVR---GDKLIEILAKRVVLATGA 217 (493)
T ss_dssp CTTEEEETTEEECCCEECS---S--SEEEEEEE---TTEEEEEEESCEEECCCE
T ss_pred hcCCEEEcCCEEEEEEcCC---c--EEEEEEec---CCeEEEEECCEEEECCCC
Confidence 5699999999999998775 3 23222222 344 6899999999874
No 256
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=61.99 E-value=10 Score=28.88 Aligned_cols=54 Identities=13% Similarity=0.040 Sum_probs=37.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+.+.+.+.+++.|.++..++ |..+..+.+ . ..+.+. ++..+.+|.+|.|+..
T Consensus 66 ~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~--~----~~~~~~---~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 66 NELMMNMRTQSEKYGTTIITET-IDHVDFSTQ--P----FKLFTE---EGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEECSSS--S----EEEEET---TCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHhhcCcEEEEeE-EEEeecCCC--c----eEEEEC---CCeEEEEeEEEEcccc
Confidence 3467788888999999987665 555555542 2 233333 6778999999999874
No 257
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=59.06 E-value=6.7 Score=33.24 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=33.1
Q ss_pred HHHHHHHcCcEEE--cCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChhH
Q 031284 53 IRKYITDKGGRFH--LRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (162)
Q Consensus 53 l~~~l~~~Gg~i~--~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~~ 112 (162)
..+.+.+-++++. .++.|++|. + .||+++ + +.+++|.||.++.+..
T Consensus 344 y~~~~~~~~v~lv~~~~~~i~~i~--~--------~gv~~~---d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 344 YYEMFNRDNVHLVDTLSAPIETIT--P--------RGVRTS---E-REYELDSLVLATGFDA 391 (542)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEC--S--------SEEEES---S-CEEECSEEEECCCCCC
T ss_pred HHHHhCCCCEEEEecCCCCceEEc--C--------CeEEeC---C-eEEecCEEEEcCCccc
Confidence 3444555667776 478899984 2 146676 6 8899999999998764
No 258
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=57.93 E-value=15 Score=30.31 Aligned_cols=48 Identities=10% Similarity=0.047 Sum_probs=32.3
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc------------eEEeCCEEEEcCChh
Q 031284 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK------------KVVQADAYVAACDVP 111 (162)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g------------~~~~aD~VVsa~~~~ 111 (162)
.+.+.+++.|++++.++.+. .++ + .+ .+... +| ..+++|.+|.|....
T Consensus 100 ~~~~~~~~~gv~~~~g~~~~---~~~---~--~v-~v~~~---~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 100 GLAGMAKSRKVDVIQGDGQF---LDP---H--HL-EVSLT---AGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp HHHHHHHHTTCEEEEEEEEE---EET---T--EE-EEEEE---EEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCcEEEeeEEEE---ccC---C--EE-EEEec---CCcccccccccCcceEEEcCEEEECCCCC
Confidence 35567788999999999765 333 2 22 23322 23 578999999998754
No 259
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=57.87 E-value=6.6 Score=30.22 Aligned_cols=39 Identities=13% Similarity=0.011 Sum_probs=28.7
Q ss_pred HcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCChh
Q 031284 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 59 ~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+.|. ++.+..|+++..+ ++++. +|+.+++|.||.++...
T Consensus 246 ~~g~-i~~~~~v~~~~~~----------~v~~~---~g~~i~~D~vi~a~G~~ 284 (357)
T 4a9w_A 246 ARGV-LAAVPPPARFSPT----------GMQWA---DGTERAFDAVIWCTGFR 284 (357)
T ss_dssp HTTC-CCEECCCSEEETT----------EEECT---TSCEEECSEEEECCCBC
T ss_pred hcCc-eEEecCcceEeCC----------eeEEC---CCCEecCCEEEECCCcC
Confidence 4454 7888888887432 35555 78899999999999854
No 260
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=57.39 E-value=11 Score=31.08 Aligned_cols=49 Identities=14% Similarity=0.119 Sum_probs=33.2
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eE------EeCCEEEEcCChh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KV------VQADAYVAACDVP 111 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~------~~aD~VVsa~~~~ 111 (162)
+.+.+.+++.|++++.++.+.. +. + . ..|.+. +| +. +++|.+|.|+...
T Consensus 100 ~~~~~~~~~~gv~~~~g~~~~~---~~---~--~-v~V~~~---~G~~~~~~~~~~i~~d~lViAtGs~ 156 (478)
T 1v59_A 100 GGIELLFKKNKVTYYKGNGSFE---DE---T--K-IRVTPV---DGLEGTVKEDHILDVKNIIVATGSE 156 (478)
T ss_dssp HHHHHHHHHTTCEEEESEEEES---SS---S--E-EEEECC---TTCTTCCSSCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEEEEEEc---cC---C--e-EEEEec---CCCcccccccceEEeCEEEECcCCC
Confidence 3456677889999999998752 33 2 2 233332 34 45 8999999999854
No 261
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=53.70 E-value=18 Score=29.66 Aligned_cols=49 Identities=8% Similarity=0.063 Sum_probs=33.3
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCCh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~ 110 (162)
...+.+.+++.|++++.++.+. + +. + .+ .+.+. +| +.+++|.+|.|+..
T Consensus 96 ~~~~~~~~~~~~v~~~~g~~~~-i--~~---~--~~-~v~~~---~G~~~~~~~d~lviAtG~ 146 (468)
T 2qae_A 96 TGGVEYLFKKNKVTYYKGEGSF-E--TA---H--SI-RVNGL---DGKQEMLETKKTIIATGS 146 (468)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEE-E--ET---T--EE-EEEET---TSCEEEEEEEEEEECCCE
T ss_pred HHHHHHHHHhCCCEEEEEEEEE-e--eC---C--EE-EEEec---CCceEEEEcCEEEECCCC
Confidence 3345677888999999998653 3 43 2 22 33333 55 67999999999874
No 262
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=49.86 E-value=26 Score=28.55 Aligned_cols=63 Identities=8% Similarity=0.045 Sum_probs=37.5
Q ss_pred cceeeEeCCCCcccchHHHHHHHHHcCcE-E---------------EcCceeeEEEeccCCCCcceEEEEEEEecCCceE
Q 031284 35 ASLLRMLKGSPDVYLSGPIRKYITDKGGR-F---------------HLRWGCREILYDKAANAETYVKGLAMSKATDKKV 98 (162)
Q Consensus 35 ~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~-i---------------~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~ 98 (162)
+.++.+.+|+.+ .--++..|.+.|.+ | .++.+|+++..++ + +|++. +|+.
T Consensus 212 ~k~VvVvG~G~s---g~e~A~~l~~~~~~~V~l~~r~~~~l~~~~i~~~~~v~~~~~~~---~-----~v~~~---dG~~ 277 (447)
T 2gv8_A 212 GESVLVVGGASS---ANDLVRHLTPVAKHPIYQSLLGGGDIQNESLQQVPEITKFDPTT---R-----EIYLK---GGKV 277 (447)
T ss_dssp TCCEEEECSSHH---HHHHHHHHTTTSCSSEEEECTTCCSCBCSSEEEECCEEEEETTT---T-----EEEET---TTEE
T ss_pred CCEEEEEccCcC---HHHHHHHHHHHhCCcEEEEeCCCCcCCCCCeEEecCeEEEecCC---C-----EEEEC---CCCE
Confidence 345666766652 23444555555554 3 2345666664332 2 35555 6776
Q ss_pred -EeCCEEEEcCChh
Q 031284 99 -VQADAYVAACDVP 111 (162)
Q Consensus 99 -~~aD~VVsa~~~~ 111 (162)
+.+|.||.++...
T Consensus 278 ~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 278 LSNIDRVIYCTGYL 291 (447)
T ss_dssp ECCCSEEEECCCBC
T ss_pred eccCCEEEECCCCC
Confidence 6899999999854
No 263
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=47.33 E-value=27 Score=28.99 Aligned_cols=55 Identities=16% Similarity=0.053 Sum_probs=33.4
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
.+.+.+.+++.|++++.++ ++.+..+++.++ . .+.+..+ +|+ .+.+|.+|.|+..
T Consensus 98 ~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~--~--~~~V~~~-~g~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 98 SADITAQLLSMGVQVIAGR-GELIDSTPGLAR--H--RIKATAA-DGSTSEHEADVVLVATGA 154 (499)
T ss_dssp HHHHHHHHHHTTCEEEESE-EEECCSSSCCSS--E--EEEEECT-TSCEEEEEESEEEECCCE
T ss_pred HHHHHHHHHhCCCEEEEeE-EEEecCcccCCC--C--EEEEEeC-CCcEEEEEeCEEEEcCCC
Confidence 3445777888999999997 666544200001 1 2223211 455 7899999998863
No 264
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=46.00 E-value=42 Score=30.73 Aligned_cols=57 Identities=9% Similarity=-0.030 Sum_probs=37.4
Q ss_pred chHHHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEe------------cCCceEEeCCEEEEcCChh
Q 031284 49 LSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSK------------ATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 49 l~~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~------------~~~g~~~~aD~VVsa~~~~ 111 (162)
+.+.+.+.+.+. |++++++++|.+|..++ ++..+.... ++++..+.+|++|.|+...
T Consensus 183 ~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~------~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 183 WIEQVTSELAEAEETTHLQRTTVFGSYDAN------YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHHHHHHHSTTEEEESSEEEEEEETTT------EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEeeecCC------ceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 445566667775 99999999999997543 333332110 0123468999999999854
No 265
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=44.42 E-value=50 Score=26.99 Aligned_cols=43 Identities=12% Similarity=0.268 Sum_probs=31.2
Q ss_pred HHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+.+.+++.|++++.++.+. + ++ . .|.+. ++.+++|++|.|+..
T Consensus 102 ~~~~~~~~gv~~~~g~~~~-~--~~---~-----~v~v~----~~~~~~d~lviATGs 144 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV-L--DG---K-----QVEVD----GQRIQCEHLLLATGS 144 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE-E--ET---T-----EEEET----TEEEECSEEEECCCE
T ss_pred HHHHHHhCCcEEEEEEEEE-c--cC---C-----EEEEe----eEEEEeCEEEEeCCC
Confidence 4567788999999998765 2 33 2 24443 377899999999875
No 266
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=42.21 E-value=26 Score=28.77 Aligned_cols=48 Identities=8% Similarity=-0.129 Sum_probs=32.8
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceE--EeCCEEEEcCCh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKV--VQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~--~~aD~VVsa~~~ 110 (162)
..+.+.+++.|++++.+ +|+.+..+ . ..|... +|+. +.+|.+|.|+..
T Consensus 93 ~~~~~~~~~~~v~~~~g-~v~~id~~-------~-~~V~~~---~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 93 QHKRNMSQYETLTFYKG-YVKIKDPT-------H-VIVKTD---EGKEIEAETRYMIIASGA 142 (466)
T ss_dssp HHHHHHTTCTTEEEESE-EEEEEETT-------E-EEEEET---TSCEEEEEEEEEEECCCE
T ss_pred chHHHHHHhCCCEEEEe-EEEEecCC-------e-EEEEcC---CCcEEEEecCEEEECCCC
Confidence 44555667789999888 67776422 1 234333 5677 999999999874
No 267
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=42.17 E-value=42 Score=27.52 Aligned_cols=43 Identities=7% Similarity=0.114 Sum_probs=30.4
Q ss_pred HHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+.+.+++.|++++.++.+. + +. + .+.+. |+.+++|.+|.|+..
T Consensus 99 ~~~~~~~~gv~~~~g~~~~-~--~~---~-----~v~v~----g~~~~~d~lViATGs 141 (464)
T 2eq6_A 99 VGTLLKGNGVELLRGFARL-V--GP---K-----EVEVG----GERYGAKSLILATGS 141 (464)
T ss_dssp HHHHHHHTTCEEEESCEEE-E--ET---T-----EEEET----TEEEEEEEEEECCCE
T ss_pred HHHHHHhCCCEEEeeeEEE-c--cC---C-----EEEEc----cEEEEeCEEEEcCCC
Confidence 4556788999999998664 2 33 2 23343 568899999999874
No 268
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=40.36 E-value=47 Score=27.57 Aligned_cols=48 Identities=25% Similarity=0.350 Sum_probs=31.1
Q ss_pred HHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCC-----ceEEeCCEEEEcCCh
Q 031284 52 PIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-----KKVVQADAYVAACDV 110 (162)
Q Consensus 52 ~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~-----g~~~~aD~VVsa~~~ 110 (162)
.+.+.+++. |++++.++ ++.+ +. . . |.+....+ ++.+++|++|.|+..
T Consensus 112 ~~~~~l~~~~gv~~~~g~-~~~i--~~---~--~---v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 112 SYEGMFNDTEGLDFFLGW-GSLE--SK---N--V---VVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp HHHHHHHHCTTEEEEESE-EEEE--ET---T--E---EEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHhcCCCeEEEEeE-EEEe--eC---C--E---EEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 345556778 99999996 5554 33 2 2 33331123 567999999999874
No 269
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=40.17 E-value=26 Score=28.98 Aligned_cols=48 Identities=17% Similarity=0.193 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCce--EEeCCEEEEcCCh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~--~~~aD~VVsa~~~ 110 (162)
..+.+.+++.|++++.++ ++.+ +. + . ..+... +|+ .+.+|.+|.|+..
T Consensus 109 ~~~~~~~~~~gv~~~~g~-~~~i--~~---~--~-~~v~~~---~g~~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 109 GIYQKNLEKEKVDVVFGW-ARFN--KD---G--N-VEVQKR---DNTTEVYSANHILVATGG 158 (479)
T ss_dssp HHHHHHHHHTTEEEEEEE-EEEC--TT---S--C-EEEEES---SSCCEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEe--eC---C--E-EEEEeC---CCcEEEEEeCEEEEcCCC
Confidence 344566778999999986 5554 43 2 2 233333 455 7899999999874
No 270
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=39.96 E-value=44 Score=27.36 Aligned_cols=48 Identities=15% Similarity=0.100 Sum_probs=31.9
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCC-c-eEEeCCEEEEcCChh
Q 031284 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-K-KVVQADAYVAACDVP 111 (162)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~-g-~~~~aD~VVsa~~~~ 111 (162)
.+.+.+++.|++++.++.+ .+ +. + .+ .|.+. + + +.+++|.+|.|+...
T Consensus 102 ~~~~~~~~~gv~~~~g~~~-~~--~~---~--~~-~v~~~---~gg~~~~~~d~lViAtGs~ 151 (474)
T 1zmd_A 102 GIAHLFKQNKVVHVNGYGK-IT--GK---N--QV-TATKA---DGGTQVIDTKNILIATGSE 151 (474)
T ss_dssp HHHHHHHHTTCEEEESEEE-EE--ET---T--EE-EEECT---TSCEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCCEEEEEEEE-Ee--cC---C--EE-EEEec---CCCcEEEEeCEEEECCCCC
Confidence 4567788899999999764 23 33 2 22 23322 3 3 579999999998753
No 271
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=39.38 E-value=76 Score=23.92 Aligned_cols=52 Identities=13% Similarity=-0.061 Sum_probs=38.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.....+...+.+..+..+..+....... . .+... +++.+++|++|.|+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~---~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 63 DLSTKMFEHAKKFGAVYQYGDIKSVEDKGE---Y-----KVINF---GNKELTAKAVIIATGA 114 (312)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEEECSS---C-----EEEEC---SSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhhccccccceeeeeeeeeec---c-----eeecc---CCeEEEeceeEEcccC
Confidence 356667778888999999998888876554 2 12233 5788999999999985
No 272
>2ahq_A Sigma-54, RNA polymerase sigma factor RPON; sigma-54,sigma factors, solution structure, transcription; NMR {Aquifex aeolicus} PDB: 2o8k_A 2o9l_A
Probab=37.84 E-value=39 Score=21.25 Aligned_cols=42 Identities=7% Similarity=0.204 Sum_probs=31.8
Q ss_pred CccccHHHHHHHHHHHHhccccceeeEeCCCCcccchHHHHHHHHHcCcEE
Q 031284 14 CDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRF 64 (162)
Q Consensus 14 ~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i 64 (162)
-+++|+..+-..++.+...-+. +.|+++ +.+++.|++.|..|
T Consensus 13 g~~~S~~~Ik~~Ik~lI~~Ed~------~kPlSD---~~I~~~L~~~Gi~I 54 (76)
T 2ahq_A 13 AEGLTQGELMKLIKEIVENEDK------RKPYSD---QEIANILKEKGFKV 54 (76)
T ss_dssp CCSCCHHHHHHHHHHHGGGCCS------SSCCCH---HHHHHHHTTTSSCC
T ss_pred CccccHHHHHHHHHHHHHhcCC------CCCCCH---HHHHHHHHHcCCCc
Confidence 3568999999999986654333 347777 78899999998876
No 273
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=36.63 E-value=37 Score=27.96 Aligned_cols=22 Identities=14% Similarity=0.105 Sum_probs=17.6
Q ss_pred EEEEEecCCceEEeCCEEEEcCChh
Q 031284 87 GLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 87 gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
+|++. +|+.+++|.||.++...
T Consensus 254 ~V~~~---dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 254 NAYFA---DGSSEKVDAIILCTGYI 275 (464)
T ss_dssp EEEET---TSCEEECSEEEECCCBC
T ss_pred EEEEC---CCCEEeCCEEEECCCCC
Confidence 35555 78889999999999865
No 274
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=35.89 E-value=12 Score=30.23 Aligned_cols=29 Identities=10% Similarity=-0.054 Sum_probs=24.3
Q ss_pred CcccchHHHHHHHHHcCcEEEcCceeeEE
Q 031284 45 PDVYLSGPIRKYITDKGGRFHLRWGCREI 73 (162)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I 73 (162)
++..+.+.+.+.++++|++++++++|++|
T Consensus 186 ~~~~~~~~~~~~l~~~gV~~~~~~~v~~i 214 (385)
T 3klj_A 186 LDRDGGLFLKDKLDRLGIKIYTNSNFEEM 214 (385)
T ss_dssp SCHHHHHHHHHHHHTTTCEEECSCCGGGC
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEc
Confidence 45567788899999999999999998764
No 275
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=34.33 E-value=51 Score=26.78 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=31.3
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
.+.+.+++.|++++.++.+. ++. + .+.+.. +|+.+.+|.+|.|+..
T Consensus 94 ~~~~~~~~~~v~~~~g~~~~---i~~---~-----~~~v~~--~g~~~~~d~lviAtG~ 139 (455)
T 2yqu_A 94 GVEFLFKKNGIARHQGTARF---LSE---R-----KVLVEE--TGEELEARYILIATGS 139 (455)
T ss_dssp HHHHHHHHHTCEEEESCEEE---SSS---S-----EEEETT--TCCEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecC---C-----eEEEee--CCEEEEecEEEECCCC
Confidence 34667788899999998653 343 2 233321 3678899999999874
No 276
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=33.52 E-value=51 Score=27.50 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=26.6
Q ss_pred EEEcCceeeEEEeccCCCCcceEE-----------EEEEEecCCceEEeCCEEEEcCChh
Q 031284 63 RFHLRWGCREILYDKAANAETYVK-----------GLAMSKATDKKVVQADAYVAACDVP 111 (162)
Q Consensus 63 ~i~~~~~V~~I~~~~~~~~~~~v~-----------gv~~~~~~~g~~~~aD~VVsa~~~~ 111 (162)
++..+..|.++....+ .+ ++. ++... +|+++++|.||+|+...
T Consensus 355 ~l~~~~~v~~~~~~~~-~~--~~~v~~~~~~~~~~~v~~~---dg~~~~~D~VI~ATGy~ 408 (501)
T 4b63_A 355 RILPERKITRVEHHGP-QS--RMRIHLKSSKPESEGAAND---VKETLEVDALMVATGYN 408 (501)
T ss_dssp EEECSEEEEEEECCSS-SS--CEEEEEEESCC-----------CCCEEEESEEEECCCEE
T ss_pred eecCCcceeeeeecCC-CC--eEEEEeeeeEEeCCeeEeC---CCeEEECCEEEECcCCC
Confidence 5677777777765432 12 221 22222 68889999999999964
No 277
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=32.43 E-value=65 Score=26.24 Aligned_cols=44 Identities=11% Similarity=-0.011 Sum_probs=29.1
Q ss_pred HHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCCh
Q 031284 55 KYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (162)
Q Consensus 55 ~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~ 110 (162)
+.+++. |++++.+. ++.+. . + . ..|.+. +| +.+++|.+|.|+..
T Consensus 102 ~~~~~~~~v~~~~g~-~~~~~--~---~--~-~~v~~~---~g~~~~~~~d~lviAtGs 148 (467)
T 1zk7_A 102 GILGGNPAITVVHGE-ARFKD--D---Q--S-LTVRLN---EGGERVVMFDRCLVATGA 148 (467)
T ss_dssp HHHTTCTTEEEEEEE-EEEEE--T---T--E-EEEEET---TSSEEEEECSEEEECCCE
T ss_pred HHHhccCCeEEEEEE-EEEcc--C---C--E-EEEEeC---CCceEEEEeCEEEEeCCC
Confidence 445666 99999875 66553 2 2 2 233333 56 67999999999884
No 278
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=31.89 E-value=17 Score=28.87 Aligned_cols=27 Identities=15% Similarity=0.012 Sum_probs=23.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEE
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREI 73 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I 73 (162)
..+.+.|.+.+++.|++|+++++|++|
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i 124 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEH 124 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSG
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccc
Confidence 357788888899999999999999887
No 279
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=30.59 E-value=55 Score=26.73 Aligned_cols=49 Identities=14% Similarity=0.197 Sum_probs=32.1
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCCh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~ 110 (162)
.+.+.+.+++.|++++.++.+. .+. + . ..+... +| +.+.+|.+|.|+..
T Consensus 102 ~~~~~~~~~~~~v~~~~g~~~~---~~~---~--~-~~v~~~---~g~~~~~~~d~lvlAtG~ 152 (476)
T 3lad_A 102 TGGVASLIKANGVTLFEGHGKL---LAG---K--K-VEVTAA---DGSSQVLDTENVILASGS 152 (476)
T ss_dssp HHHHHHHHHHHTCEEEESEEEE---CST---T--C-EEEECT---TSCEEEECCSCEEECCCE
T ss_pred HHHHHHHHHhCCCEEEEeEEEE---ecC---C--E-EEEEcC---CCceEEEEcCEEEEcCCC
Confidence 3445567778899999988654 343 2 2 233222 45 57899999999874
No 280
>2ra9_A Uncharacterized protein DUF1285; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Shewanella baltica}
Probab=30.50 E-value=11 Score=27.20 Aligned_cols=41 Identities=7% Similarity=-0.035 Sum_probs=27.7
Q ss_pred ceeeEeCCCCcccchHHHHHHHHHcCcEEEcCceeeEEEec
Q 031284 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYD 76 (162)
Q Consensus 36 ~~~~~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~~ 76 (162)
+.+-+.+.++...|++-++..|.+.+++.++-++|+++.++
T Consensus 33 G~W~y~G~pI~r~lVrLFssiL~~edg~y~LvTPvEK~~I~ 73 (150)
T 2ra9_A 33 GDWTYLGTSLPAKFAKLFASILHCIDDEYFLITPVEKVRVQ 73 (150)
T ss_dssp SCEEETTEECCHHHHHHHHTTEEEETTEEEEECSSCEEEEE
T ss_pred CcEEECCccccHHHHHHHHHheEecCCeEEEECCCEEEeEE
Confidence 34445555554455555556666688999999999987664
No 281
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=29.48 E-value=1.1e+02 Score=25.14 Aligned_cols=49 Identities=10% Similarity=-0.024 Sum_probs=31.9
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCc--eEEeCCEEEEcCCh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g--~~~~aD~VVsa~~~ 110 (162)
.+.+...+++.|++++.+..+. .+. + . ..|... +| +.+.+|.+|.|+..
T Consensus 118 ~~~~~~~~~~~~v~~~~g~~~~---~~~---~--~-~~v~~~---~g~~~~~~~d~lViATGs 168 (491)
T 3urh_A 118 VDGVSFLFKKNKIDGFQGTGKV---LGQ---G--K-VSVTNE---KGEEQVLEAKNVVIATGS 168 (491)
T ss_dssp HHHHHHHHHHTTCEEEESEEEE---CSS---S--E-EEEECT---TSCEEEEECSEEEECCCE
T ss_pred HHHHHHHHHhCCCEEEEEEEEE---ecC---C--E-EEEEeC---CCceEEEEeCEEEEccCC
Confidence 3445666788999999887553 333 2 2 233222 44 57899999999864
No 282
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=29.17 E-value=80 Score=25.79 Aligned_cols=45 Identities=18% Similarity=0.099 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+.+.+.+++.|++++.++. +.+ +. . . |.+ +|+.+++|.+|.|+..
T Consensus 96 ~~~~~~~~~~gv~~~~g~~-~~i--~~---~--~---v~~----~g~~~~~d~lviAtGs 140 (463)
T 2r9z_A 96 SFWDGYVERLGITRVDGHA-RFV--DA---H--T---IEV----EGQRLSADHIVIATGG 140 (463)
T ss_dssp HHHHHHHHHTTCEEEESCE-EEE--ET---T--E---EEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHHHHCCCEEEEeEE-EEc--cC---C--E---EEE----CCEEEEcCEEEECCCC
Confidence 3445566789999999864 333 33 2 2 333 3678999999999874
No 283
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=28.89 E-value=21 Score=27.93 Aligned_cols=26 Identities=8% Similarity=0.101 Sum_probs=22.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEE
Q 031284 47 VYLSGPIRKYITDKGGRFHLRWGCREI 73 (162)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~I 73 (162)
..+...|.+.++++|++|+. ++|++|
T Consensus 142 ~~~~~~l~~~~~~~G~~i~~-~~v~~l 167 (363)
T 1c0p_A 142 PKYCQYLARELQKLGATFER-RTVTSL 167 (363)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCSBG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEcccH
Confidence 35778999999999999998 898886
No 284
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=28.58 E-value=75 Score=26.22 Aligned_cols=49 Identities=12% Similarity=0.192 Sum_probs=31.2
Q ss_pred HHHHHHHHHc-CcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCc---eEEeCCEEEEcCCh
Q 031284 51 GPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDK---KVVQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~~-Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~--~~~g---~~~~aD~VVsa~~~ 110 (162)
+.+.+.+++. |++++.++ ++.+ +. + . +.+.. +.+| +.+.+|.+|.|+..
T Consensus 107 ~~~~~~l~~~~gv~~~~g~-~~~i--~~---~--~---v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 107 DSYEGMFADTEGLTFHQGF-GALQ--DN---H--T---VLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp HHHHHHHHTSTTEEEEESE-EEEE--ET---T--E---EEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEEeE-EEEe--eC---C--E---EEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 3445566778 99999997 5555 33 2 2 33321 0135 67899999998874
No 285
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=24.90 E-value=74 Score=26.51 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=29.0
Q ss_pred HHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 58 ~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
++.|++++++.+|+.+. . + . +.+. |+.+++|.+|.|+..
T Consensus 146 ~~~gv~~~~~~~v~~i~--~---~--~---v~~~----g~~~~~d~lViATGs 184 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVID--N---H--T---VEAA----GKVFKAKNLILAVGA 184 (523)
T ss_dssp HTSCCCEEESSCCEEEE--T---T--E---EEET----TEEEEBSCEEECCCE
T ss_pred ccCCcEEEEeeEEEEee--C---C--E---EEEC----CEEEEeCEEEECCCC
Confidence 77899999888888774 2 2 2 3333 678999999999874
No 286
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=23.64 E-value=1.1e+02 Score=24.83 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
..+.+.+++.|++++.++. +.+ +. . . |.+ +|+.+++|.+|.|+..
T Consensus 97 ~~~~~~~~~~~v~~~~g~~-~~i--~~---~--~---v~~----~g~~~~~d~lviAtGs 141 (450)
T 1ges_A 97 TSYENVLGKNNVDVIKGFA-RFV--DA---K--T---LEV----NGETITADHILIATGG 141 (450)
T ss_dssp HHHHHHHHHTTCEEEESCC-EEE--ET---T--E---EEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeEE-EEe--cC---C--E---EEE----CCEEEEeCEEEECCCC
Confidence 3444566788999999864 344 33 2 2 333 3678999999999874
No 287
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=23.52 E-value=56 Score=27.06 Aligned_cols=50 Identities=4% Similarity=0.061 Sum_probs=25.5
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEe----------cCCceEEeCCEEEEcCCh
Q 031284 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK----------ATDKKVVQADAYVAACDV 110 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~----------~~~g~~~~aD~VVsa~~~ 110 (162)
.+.+.+.+++.|++++.++.+ .+ +. + + +.+.. +++++.+.+|.+|.|+..
T Consensus 92 ~~~~~~~~~~~gv~~~~g~~~-~i--d~---~--~---v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs 151 (500)
T 1onf_A 92 NNIYRQNLSKDKVDLYEGTAS-FL--SE---N--R---ILIKGTKDNNNKDNGPLNEEILEGRNILIAVGN 151 (500)
T ss_dssp HHHHHHHHHHTTCEEEESCCC-CC------------------------------------CBSSEEECCCC
T ss_pred HHHHHHHHHhCCCEEEEeEEE-Ee--eC---C--E---EEEEeccccccccccCCCceEEEeCEEEECCCC
Confidence 334556678899999999754 22 22 2 2 22220 112567899999999874
No 288
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=21.72 E-value=94 Score=18.95 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.5
Q ss_pred hHHHHHHHHHcCcEEEc
Q 031284 50 SGPIRKYITDKGGRFHL 66 (162)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~ 66 (162)
-+.+.+.++++||++.-
T Consensus 23 ~~~l~~~i~~~GG~~~~ 39 (92)
T 4id3_A 23 RLQLHEMIVLHGGKFLH 39 (92)
T ss_dssp HHHHHHHHHHTTCEEES
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 46799999999999864
No 289
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=21.19 E-value=29 Score=24.91 Aligned_cols=30 Identities=20% Similarity=0.179 Sum_probs=26.2
Q ss_pred cccchHHHHHHHHHcCcEEEcCceeeEEEe
Q 031284 46 DVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (162)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~I~~ 75 (162)
...++++..+.|++.|+++-+...|-.|.-
T Consensus 89 A~VISe~Al~lL~~~GI~v~Y~~~Vp~I~N 118 (151)
T 1vk9_A 89 AKVISKPALKLMNEYGQSFSYDEKIPFVLG 118 (151)
T ss_dssp EEEEEHHHHHHHHHTTCCEEEEEEESSCBC
T ss_pred hHHhhHHHHHHHHHcCCceeeeeecceeEc
Confidence 356899999999999999999999988743
No 290
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=20.17 E-value=1.5e+02 Score=24.00 Aligned_cols=49 Identities=10% Similarity=-0.048 Sum_probs=31.4
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCceEEeCCEEEEcCCh
Q 031284 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (162)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~I~~~~~~~~~~~v~gv~~~~~~~g~~~~aD~VVsa~~~ 110 (162)
+.+.+...+++.|++++.++. +.+ +. . . ..+. . +++.+.+|.+|.|+..
T Consensus 110 ~~~~~~~~~~~~gv~~~~g~~-~~~--~~---~--~-~~v~-~---~g~~~~~d~lviAtG~ 158 (478)
T 3dk9_A 110 LNAIYQNNLTKSHIEIIRGHA-AFT--SD---P--K-PTIE-V---SGKKYTAPHILIATGG 158 (478)
T ss_dssp HHHHHHHHHHHTTCEEEESCE-EEC--SC---S--S-CEEE-E---TTEEEECSCEEECCCE
T ss_pred HHHHHHHHHHhCCcEEEEeEE-EEe--eC---C--e-EEEE-E---CCEEEEeeEEEEccCC
Confidence 334456667788999998863 222 22 1 1 1233 3 5778999999999863
Done!