BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031285
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZT6|TRL32_ARATH Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC2 PE=2 SV=1
Length = 192
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 103/161 (63%), Gaps = 15/161 (9%)
Query: 1 MYGAIRLSPSLR-----FRTLLPTNPRDQSRDLFVPPRILSISSSNITKSVNFRGKIDNV 55
M + LS SLR L+P P Q+ F PR S T + +
Sbjct: 1 MSEIVNLSSSLRSLNPKISPLVP--PYRQTSSSFSRPRNFKYHS--FTDKICLAAERIRA 56
Query: 56 IRVTKHEGSIKELNEDDDDDHAPVSIPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWC 115
+ + K +G ++EL D +PVS+ L PI ES FD+V+ +AQ+L ESV+IVWMA+WC
Sbjct: 57 VDIQKQDGGLQEL------DDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWC 110
Query: 116 RKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGV 156
RKCIYLKPKLEKLAA+++PRLRFY+VDVNAVP++LV+RAGV
Sbjct: 111 RKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGV 151
>sp|Q9FG36|TRL31_ARATH Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC1 PE=2 SV=3
Length = 210
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 58/79 (73%)
Query: 78 PVSIPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLR 137
P ++ + PI + + D V++ A+QL + +II WMASWCRKCIYLKPKLEKLAA+Y+ R +
Sbjct: 93 PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152
Query: 138 FYNVDVNAVPHKLVARAGV 156
FY VDVN VP LV R +
Sbjct: 153 FYYVDVNKVPQTLVKRGNI 171
>sp|Q6Z7L3|TRL31_ORYSJ Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0774100 PE=2 SV=2
Length = 193
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 81 IPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYN 140
+ + I S + D + + + + +II WMASWCRKCIYLKP+LEK+A ++ P +RFY
Sbjct: 80 VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRLEKIAGEF-PGVRFYF 138
Query: 141 VDVNAVPHKLVARAGV 156
VDVN VP +V R +
Sbjct: 139 VDVNKVPQTVVKRGNI 154
>sp|P22217|TRX1_YEAST Thioredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX1 PE=1 SV=3
Length = 103
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVD 142
+T + S+FD IA+ D+ V++ + A+WC C + P +EK + Y P+ FY +D
Sbjct: 2 VTQFKTASEFDSAIAQ----DKLVVVDFYATWCGPCKMIAPMIEKFSEQY-PQADFYKLD 56
Query: 143 VN 144
V+
Sbjct: 57 VD 58
>sp|P34723|THIO_PENCH Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1
Length = 106
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVD 142
+TPI S +++ + +A V++ + A+WC C + P LEKL ++ H ++FY VD
Sbjct: 3 VTPIKSVAEYKEKVTDATG---PVVVDFHATWCGPCKAIAPALEKL-SETHTGIQFYKVD 58
Query: 143 VN 144
V+
Sbjct: 59 VD 60
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA
PE=1 SV=5
Length = 108
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 103 DESVIIVWMASWCRKCIYLKPKLEKLAADYHPR--LRFYNVDVN----------AVPHKL 150
D++V++ + ASWC C+ L P +E+LA DY + + NVD N ++P L
Sbjct: 20 DKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGIRSIPTML 79
Query: 151 VARAGVMVSLMI 162
+ + G +V M+
Sbjct: 80 IIKGGKVVDQMV 91
>sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX2 PE=1 SV=3
Length = 104
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVD 142
+T + S S++D +A +L V++ + A+WC C + P +EK A Y FY +D
Sbjct: 2 VTQLKSASEYDSALASGDKL---VVVDFFATWCGPCKMIAPMIEKFAEQYSDA-AFYKLD 57
Query: 143 VNAV 146
V+ V
Sbjct: 58 VDEV 61
>sp|O48737|TRXM1_ARATH Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680
PE=1 SV=1
Length = 179
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 85 PIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
P+ ++S +D ++ +A DE V + + A WC C + P + +LA Y + +FY ++ +
Sbjct: 77 PVVNDSTWDSLVLKA---DEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTD 133
Query: 145 AVP 147
P
Sbjct: 134 ESP 136
>sp|Q8KE49|THIO2_CHLTE Thioredoxin-2 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025
/ TLS) GN=trx2 PE=3 SV=3
Length = 109
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 97 AEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPR--LRFYNVDVN---------- 144
AE D+ ++ + A+WC C+ L P +E+LA DY + + NVD N
Sbjct: 15 AEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNTAGQYGIR 74
Query: 145 AVPHKLVARAGVMVSLMI 162
++P L+ + G +V M+
Sbjct: 75 SIPTMLIIKGGKVVDQMV 92
>sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360
PE=1 SV=2
Length = 193
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 70 EDDDDDHAPVSIPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLA 129
E D A V +P S+S++ + E+ D V++ + A WC C + P +++LA
Sbjct: 77 EAQDTTAAAVEVPNL---SDSEWQTKVLES---DVPVLVEFWAPWCGPCRMIHPIVDQLA 130
Query: 130 ADYHPRLRFYNVDVNAVPH 148
D+ + +FY ++ + P+
Sbjct: 131 KDFAGKFKFYKINTDESPN 149
>sp|Q92249|ERP38_NEUCR Protein disulfide-isomerase erp38 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=erp38 PE=2 SV=2
Length = 369
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 93 DRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADY--HPRLRFYNVDVNA-VPHK 149
D I A D++V++ + A WC C L P EKLAA + P + VD +A K
Sbjct: 148 DATIKGAIGGDKNVLVAFTAPWCGHCKNLAPTWEKLAATFASDPEITIAKVDADAPTGKK 207
Query: 150 LVARAGV 156
A GV
Sbjct: 208 SAAEYGV 214
>sp|Q9XGS0|TRXM_BRANA Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1
Length = 177
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 85 PIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
P+ ++S ++ ++ +A DE V++ + A WC C + P + +LA Y +++F+ ++ +
Sbjct: 74 PMVNDSTWESLVLKA---DEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTD 130
Query: 145 ---AVPHKLVARA 154
A P K R+
Sbjct: 131 DSPATPGKYGVRS 143
>sp|O96952|THIO_GEOCY Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1
Length = 106
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
+ +++ FD+ + +A D+ V+I + ASWC C + PK ++A ++ P + FY VDV+
Sbjct: 5 LKTKADFDQALKDAG--DKLVVIDFTASWCGPCQRIAPKYVEMAKEF-PDVIFYKVDVD 60
>sp|P0A0K5|THIO_STAAW Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|P0A0K6|THIO_STAAU Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|Q6GA69|THIO_STAAS Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3
SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|Q6GHU0|THIO_STAAR Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3
SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|P99122|THIO_STAAN Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1
SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|P0A0K4|THIO_STAAM Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=trxA PE=1 SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|Q5HGT9|THIO_STAAC Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|Q2YXD0|THIO_STAAB Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=trxA PE=3 SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|Q2FZD2|THIO_STAA8 Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA
PE=2 SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|Q2FHT6|THIO_STAA3 Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3
SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+++ FD + QL + + A+WC C + P LE+LAADY + +DV+ P
Sbjct: 7 TDADFDSKVESGVQL-----VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENP 61
>sp|P52230|THIO_STRCO Thioredoxin OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=trxA PE=1 SV=4
Length = 110
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 103 DESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPHKLVARAGVM 157
D+ V++ + A+WC C + P LE +AA+Y ++ ++++ P A+ GVM
Sbjct: 21 DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGT-AAKYGVM 74
>sp|Q7XKD0|TRXX_ORYSJ Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica
GN=TRX-X PE=2 SV=1
Length = 180
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+S+F+ AE Q D V++ ++A WC C + P ++ A +Y RL+ +D +A P
Sbjct: 73 GQSEFE---AEVLQSDLPVLVDFVADWCGPCRLIAPVVDWAAEEYEGRLKIVKIDHDANP 129
Query: 148 H 148
Sbjct: 130 Q 130
>sp|O51088|THIO_BORBU Thioredoxin OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP
102532 / DSM 4680) GN=trxA PE=3 SV=1
Length = 117
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 103 DESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
D II + A+WC C L P EKL+ Y + FY VD +
Sbjct: 28 DRPAIIDFYANWCGPCKMLSPIFEKLSKKYENSIDFYKVDTD 69
>sp|P29429|THIO_EMENI Thioredoxin OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=TRX1 PE=1 SV=2
Length = 110
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 85 PIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
PI S+++F + A+ V++ A+WC C + P +EK A Y FY +DV+
Sbjct: 9 PITSKAEFQEKVLNAKGF---VVVDCFATWCGPCKAIAPTVEKFAQTYT-DASFYQIDVD 64
>sp|Q655X0|TRXO_ORYSJ Thioredoxin O, mitochondrial OS=Oryza sativa subsp. japonica
GN=Os06g0665900 PE=2 SV=2
Length = 174
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
+GS F ++++ + + + A WC C + P + KL++ Y P++ Y VD++
Sbjct: 67 VGSAESFTSIMSKVEAEKLPAVFYYTAVWCGPCRAMAPVISKLSSRY-PKIPIYKVDID 124
>sp|Q4L5F0|THIO_STAHJ Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=trxA PE=3 SV=1
Length = 104
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++S FD I +L + + A+WC C + P LE+LA DY + +DV+ P
Sbjct: 7 TDSNFDENIQSGVKL-----VDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
>sp|P73263|THIO2_SYNY3 Thioredoxin-like protein slr1139 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1139 PE=1 SV=1
Length = 109
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++++F++ E Q + V++ + ASWC C + P ++ +A DY +L+ ++V+ P
Sbjct: 7 TDAEFEQ---ETQGQTKPVLVYFWASWCGPCRLMAPAIQAIAKDYGDKLKVLKLEVDPNP 63
>sp|Q0DKF1|TRH42_ORYSJ Thioredoxin H4-2 OS=Oryza sativa subsp. japonica GN=Os05g0169000
PE=2 SV=1
Length = 132
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
I S+ +DR I EA + + V+ + ASWC C + P +++ Y P+L F +DV+
Sbjct: 27 ITSKEDWDRKIEEANKDGKIVVANFSASWCGPCRVIAPIYAEMSKTY-PQLMFLTIDVD 84
>sp|Q8CPL5|THIO_STAES Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=trxA PE=3 SV=1
Length = 104
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++S FD I +L + + A+WC C + P LE+LA DY + +DV+ P
Sbjct: 7 TDSDFDSKIESGVKL-----VDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
>sp|Q5HQ29|THIO_STAEQ Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=trxA PE=3 SV=1
Length = 104
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++S FD I +L + + A+WC C + P LE+LA DY + +DV+ P
Sbjct: 7 TDSDFDSKIESGVKL-----VDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENP 61
>sp|Q49WR2|THIO_STAS1 Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1
Length = 104
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
++S FD I L + + A+WC C + P LE+LA DY + +DV+ P
Sbjct: 7 TDSNFDDNIQSGVNL-----VDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDENP 61
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 93 DRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
DRV+ + V++ + A WC C L P+LEK+ A H ++ VD++
Sbjct: 72 DRVVNS----ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
>sp|Q942L2|PDI22_ORYSJ Protein disulfide isomerase-like 2-2 OS=Oryza sativa subsp.
japonica GN=PDIL2-2 PE=2 SV=1
Length = 371
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
+ES F++ + + D ++ + A WC C L P+ EKL A + + V+
Sbjct: 41 TESTFEKEVGQ----DRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVFIAKVDCDE 96
Query: 148 HKLV-ARAGV 156
HK V ++ GV
Sbjct: 97 HKSVCSKYGV 106
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 91 QFDRVIAEAQQLDES--VIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVPH 148
FD ++ LDE+ +++ + A WC C +L P EKLA+ Y +++A H
Sbjct: 162 NFDSIV-----LDENKDILVEFYAPWCGHCKHLAPIYEKLASVYKLDDGVVIANLDADKH 216
Query: 149 K-LVARAGV 156
K L + GV
Sbjct: 217 KDLAEKYGV 225
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 93 DRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
DRV+ + V++ + A WC C L P+LEK+ A H ++ VD++
Sbjct: 72 DRVVNS----ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
>sp|P97493|THIOM_MOUSE Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1
Length = 166
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 93 DRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
DRV+ + V++ + A WC C L P+LEK+ A H ++ VD++
Sbjct: 72 DRVVNS----ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
>sp|Q8IFW4|THIOT_DROME Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=2 SV=1
Length = 157
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 85 PIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFY--NVD 142
P+ ++ D+ + A+ D+ V+I + A WC C + PKL++LA +Y R+ NVD
Sbjct: 4 PVRNKDDLDQQLILAE--DKLVVIDFYADWCGPCKIIAPKLDELAHEYSDRVVVLKVNVD 61
Query: 143 ----------VNAVPHKLVARAGVMVSLMI 162
VN++P + + G ++ L +
Sbjct: 62 ENEDITVEYNVNSMPTFVFIKGGNVLELFV 91
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1
Length = 122
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
++ +FD + +A++ + VII + ASWC C ++ P + A + P F VDV+
Sbjct: 13 NKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF-PGAVFLKVDVD 68
>sp|Q0D840|TRXH1_ORYSJ Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1
Length = 122
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 88 SESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
++ +FD + +A++ + VII + ASWC C ++ P + A + P F VDV+
Sbjct: 13 NKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF-PGAVFLKVDVD 68
>sp|Q9Z7P5|THIO_CHLPN Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1
Length = 102
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 83 LTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADY-HPRLRFYNV 141
+ I S FD IA V++ + A WC C L P LE LAA+ H + N+
Sbjct: 1 MVKIISSENFDSFIASGL-----VLVDFFAEWCGPCRMLTPILENLAAELPHVTIGKINI 55
Query: 142 DVNAVP 147
D N+ P
Sbjct: 56 DENSKP 61
>sp|Q9CAS1|TRXH8_ARATH Thioredoxin H8 OS=Arabidopsis thaliana GN=TRX8 PE=2 SV=1
Length = 148
Score = 37.0 bits (84), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
I + +Q+ + + ++ ++I + A WC C L+PKLE+LAA Y + F +DV+
Sbjct: 42 IKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYT-DVEFVKIDVDV 100
Query: 146 V 146
+
Sbjct: 101 L 101
>sp|Q7KQL8|THIO_PLAF7 Thioredoxin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0545
PE=1 SV=1
Length = 104
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
+ S+++FD +I++ +E VI+ + A WC C + P E+ + Y ++ F VDV+
Sbjct: 5 VTSQAEFDSIISQ----NELVIVDFFAEWCGPCKRIAPFYEECSKTY-TKMVFIKVDVDE 59
Query: 146 VPH 148
V
Sbjct: 60 VSE 62
>sp|O14463|TRX1_SCHPO Thioredoxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=trx1 PE=3 SV=3
Length = 103
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNA 145
+ S+F ++ + D+ V++ + A+WC C + PK E+ + Y F VDV+
Sbjct: 5 VSDSSEFKSIVCQ----DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDA-TFIKVDVDQ 59
Query: 146 VPHKLVARAGV 156
+ ++ A AGV
Sbjct: 60 L-SEIAAEAGV 69
>sp|Q9TW67|NGLY1_CAEEL Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Caenorhabditis elegans GN=png-1 PE=1 SV=1
Length = 606
Score = 36.6 bits (83), Expect = 0.069, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 81 IPLTPIGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADY 132
+P+T +GS + + ++ E + +II + A+WC C + P E+ +A+Y
Sbjct: 1 MPVTEVGSLPELNNIL-ERSDANRLIIIDFFANWCGPCRMISPIFEQFSAEY 51
>sp|P52233|THIO_THIFE Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1
Length = 108
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 106 VIIVWMASWCRKCIYLKPKLEKLAADYHPRLRF--YNVDVN----------AVPHKLVAR 153
V++ + A WC C + P LE++A +Y RLR +N+D N +P L+ +
Sbjct: 24 VLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFNIDENPNTPPQYAIRGIPTLLLFK 83
Query: 154 AG 155
AG
Sbjct: 84 AG 85
>sp|Q95108|THIOM_BOVIN Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Length = 166
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 106 VIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVN 144
V++ + A WC C L P+LEK+ A H ++ VD++
Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDID 119
>sp|P80028|TRXH_CHLRE Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3
Length = 113
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 86 IGSESQFDRVIAEAQQLDESVIIVWMASWCRKCIYLKPKLEKLAADYHPRLRF 138
I S++ +D +A+ ++ + +++ + A+WC C + P E L+ DY ++ F
Sbjct: 8 IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIF 60
>sp|O84544|THIO_CHLTR Thioredoxin OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trxA
PE=3 SV=1
Length = 102
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 106 VIIVWMASWCRKCIYLKPKLEKLAADYHPRLRFYNVDVNAVP 147
V+I + A WC C L P LE LAA+ P + VD+++ P
Sbjct: 19 VLIDFFAEWCGPCKMLTPVLEALAAEL-PHVTILKVDIDSSP 59
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,398,351
Number of Sequences: 539616
Number of extensions: 2211403
Number of successful extensions: 6926
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 6833
Number of HSP's gapped (non-prelim): 162
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)