BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031294
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39732|GCSH_FLAAN Glycine cleavage system H protein, mitochondrial OS=Flaveria
anomala GN=GDCSH PE=2 SV=1
Length = 162
Score = 272 bits (696), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/162 (79%), Positives = 147/162 (90%)
Query: 1 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITD 60
MALRMWASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT+GITD
Sbjct: 1 MALRMWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITD 60
Query: 61 HAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGL 120
HAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL
Sbjct: 61 HAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGL 120
Query: 121 VNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 162
+NSSPYE+GW+IKVKPS+PS+L+SLM + YTKFCEEE+AAH
Sbjct: 121 INSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162
>sp|P49359|GCSH_FLAPR Glycine cleavage system H protein, mitochondrial OS=Flaveria
pringlei GN=GDCSH PE=2 SV=1
Length = 162
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 126/162 (77%), Positives = 147/162 (90%)
Query: 1 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITD 60
MALR+WASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT+GITD
Sbjct: 1 MALRIWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITD 60
Query: 61 HAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGL 120
HAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL
Sbjct: 61 HAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGL 120
Query: 121 VNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 162
+NSSPYE+GW+IKVKPS+PS+L+SLM + YTKFCEEE++AH
Sbjct: 121 INSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162
>sp|A3C6G9|GCSH_ORYSJ Glycine cleavage system H protein, mitochondrial OS=Oryza sativa
subsp. japonica GN=GDCSH PE=1 SV=1
Length = 164
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/163 (76%), Positives = 146/163 (89%), Gaps = 3/163 (1%)
Query: 1 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALR+WASS ANAL+ISC+ T PA+++SR FS+VLDGLKY+SSHEWVK++GSVAT+G
Sbjct: 1 MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
ITDHAQ HLGEVVFVELPE GA V QGG FG VESVKATSD+NSPISGEV+EVN KL+ET
Sbjct: 61 ITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSET 120
Query: 118 PGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 160
PGL+NSSPYE+GW+IKVKPSSPS+L++L+DP YTK CEEE+A
Sbjct: 121 PGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
>sp|A2Z9B8|GCSH_ORYSI Glycine cleavage system H protein, mitochondrial OS=Oryza sativa
subsp. indica GN=GDCSH PE=2 SV=1
Length = 164
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/163 (76%), Positives = 146/163 (89%), Gaps = 3/163 (1%)
Query: 1 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALR+WASS ANAL+ISC+ T PA+++SR FS+VLDGLKY+SSHEWVK++GSVAT+G
Sbjct: 1 MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
ITDHAQ HLGEVVFVELPE GA V QGG FG VESVKATSD+NSPISGEV+EVN KL+ET
Sbjct: 61 ITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSET 120
Query: 118 PGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 160
PGL+NSSPYE+GW+IKVKPSSPS+L++L+DP YTK CEEE+A
Sbjct: 121 PGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
>sp|P46485|GCSH_FLATR Glycine cleavage system H protein, mitochondrial OS=Flaveria
trinervia GN=GDCSH PE=2 SV=1
Length = 165
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/163 (77%), Positives = 143/163 (87%), Gaps = 2/163 (1%)
Query: 1 MALRMWASSTANALRISCASKTPAFALSRCFSS--VLDGLKYASSHEWVKHEGSVATVGI 58
MALR+WASSTA ALR+S AS+ L RCFSS VLDGLKYA+SHEWVKHEGSVAT+GI
Sbjct: 1 MALRIWASSTAKALRLSSASRPHFSPLFRCFSSAAVLDGLKYANSHEWVKHEGSVATIGI 60
Query: 59 TDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETP 118
TDHAQDHLGEVVFVELPE G SV + GFG VESVKATSDVNSPISGE++EVN+KLT+TP
Sbjct: 61 TDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTP 120
Query: 119 GLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAA 161
GL+N SPYE+GW+IKVKPS+PS+L+SLM P+ YTKFCEEE AA
Sbjct: 121 GLINKSPYEDGWMIKVKPSNPSELDSLMGPKEYTKFCEEEGAA 163
>sp|P16048|GCSH_PEA Glycine cleavage system H protein, mitochondrial OS=Pisum sativum
GN=GDCSH PE=1 SV=1
Length = 165
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/165 (77%), Positives = 146/165 (88%), Gaps = 3/165 (1%)
Query: 1 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALRMWASSTANAL++S +S+ P F++SRCFS+VLDGLKYA SHEWVKHEGSVAT+G
Sbjct: 1 MALRMWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
ITDHAQDHLGEVVFVELPE G SV +G GFG VESVKATSDVNSPISGEVIEVNT LT
Sbjct: 61 ITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGK 120
Query: 118 PGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 162
PGL+NSSPYE+GW+IK+KP+SP +LESL+ + YTKFCEEE+AAH
Sbjct: 121 PGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165
>sp|Q9LQL0|GCSH2_ARATH Probable glycine cleavage system H protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1
Length = 166
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/166 (76%), Positives = 149/166 (89%), Gaps = 4/166 (2%)
Query: 1 MALRMWASSTANALRISCASKT----PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATV 56
MALRMWASSTANAL++S ++ PAF++SRCFSSVL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1 MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60
Query: 57 GITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTE 116
GITDHAQDHLGEVVFVELPE +SV + FG VESVKATS++ SPISGEVIEVNTKLTE
Sbjct: 61 GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120
Query: 117 TPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 162
+PGL+NSSPYE+GW+IKVKPSSP++LE+LM P+ YTKFCEEE+AAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166
>sp|P49360|GCSH_FLAPU Glycine cleavage system H protein, mitochondrial (Fragment)
OS=Flaveria pubescens GN=GDCSH PE=2 SV=1
Length = 152
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/152 (78%), Positives = 137/152 (90%)
Query: 1 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITD 60
MALRMWASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVATVGITD
Sbjct: 1 MALRMWASSTANALRLSSATRPHYSPLSRCFSSVLDGLKYANSHEWVKHEGSVATVGITD 60
Query: 61 HAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGL 120
HAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL
Sbjct: 61 HAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGL 120
Query: 121 VNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
+NSSPYE+GW+IKVKPS+PS+L+SLM + YT
Sbjct: 121 INSSPYEDGWMIKVKPSNPSELDSLMGAKEYT 152
>sp|P93255|GCSH_MESCR Glycine cleavage system H protein, mitochondrial
OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1
Length = 163
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/163 (75%), Positives = 142/163 (87%), Gaps = 4/163 (2%)
Query: 1 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALRMWASS ANAL +SCA K+ PA +LSRCFS+VLDGLKYASSHEWVKH GSVAT+G
Sbjct: 1 MALRMWASSAANALGVSCAPKSHLLPALSLSRCFSTVLDGLKYASSHEWVKHGGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
ITDHAQ HLG+VVF ELPE GA V G F VESVKATSDVNSPISGE++EVNTKL+++
Sbjct: 61 ITDHAQGHLGDVVFAELPEGGA-VSAGKPFASVESVKATSDVNSPISGEIVEVNTKLSDS 119
Query: 118 PGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 160
PGL+NSSPYEEGW++KVKPS+P++LESLM + YTKFCEEE+A
Sbjct: 120 PGLLNSSPYEEGWMVKVKPSNPAELESLMGSKEYTKFCEEEDA 162
>sp|P25855|GCSH1_ARATH Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis
thaliana GN=GDCSH PE=1 SV=1
Length = 165
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/165 (73%), Positives = 142/165 (86%), Gaps = 3/165 (1%)
Query: 1 MALRMWASSTANALRISCASKTPA---FALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALRMWASSTANAL++S + F+ SRCFS+VL+GLKYA+SHEWVKHEGSVAT+G
Sbjct: 1 MALRMWASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
IT HAQDHLGEVVFVELPE SV + FG VESVKATS++ SPISGE+IEVN KLTE+
Sbjct: 61 ITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTES 120
Query: 118 PGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 162
PGL+NSSPYE+GW+IKVKPSSP++LESLM P+ YTKFCEEE+AAH
Sbjct: 121 PGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165
>sp|B4UGZ2|GCSH_ANASK Glycine cleavage system H protein OS=Anaeromyxobacter sp. (strain
K) GN=gcvH PE=3 SV=1
Length = 128
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 89/126 (70%)
Query: 34 VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESV 93
+ + L+Y HEW + +GS VGITD AQ LG+VV+VELP+ G VK+G FGVVES
Sbjct: 3 IPEDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVEST 62
Query: 94 KATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 153
KA S++ +PISG+VIEVN L++ P +N PYEEGW+I ++PS P DLE+LMD AY
Sbjct: 63 KAVSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKA 122
Query: 154 FCEEEN 159
F EE+
Sbjct: 123 FVEEQE 128
>sp|B8JDY7|GCSH_ANAD2 Glycine cleavage system H protein OS=Anaeromyxobacter dehalogenans
(strain 2CP-1 / ATCC BAA-258) GN=gcvH PE=3 SV=1
Length = 128
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 89/126 (70%)
Query: 34 VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESV 93
+ + L+Y HEW + +GS VGITD AQ LG+VV+VELP+ G VK+G FGVVES
Sbjct: 3 IPEDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVEST 62
Query: 94 KATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 153
KA S++ +PISG+VIEVN L++ P +N PYEEGW+I ++PS P DLE+LMD AY
Sbjct: 63 KAVSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKA 122
Query: 154 FCEEEN 159
F EE+
Sbjct: 123 FVEEQE 128
>sp|Q67N37|GCSH_SYMTH Glycine cleavage system H protein OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=gcvH PE=3 SV=1
Length = 128
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 89/120 (74%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LKY+ HEW++ EG++ VGIT AQD LG+VVFVELPE G +KQ FGVVESVK S
Sbjct: 8 LKYSKEHEWIRVEGNIGIVGITWFAQDQLGDVVFVELPEVGRELKQNEQFGVVESVKTVS 67
Query: 98 DVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 157
D+ P SG+V+EVNTKL +P L+N PY EGW++K++ S+P++L++L+D AY F +E
Sbjct: 68 DLYCPASGKVVEVNTKLESSPELINQDPYGEGWILKLELSNPAELDNLLDAAAYDAFTKE 127
>sp|Q1AR90|GCSH_RUBXD Glycine cleavage system H protein OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=gcvH PE=3 SV=1
Length = 126
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
Query: 31 FSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVV 90
+ + L Y +HEW + EG ATVGITDHAQ+ LG+VVFVELPE G+SV+ G FG +
Sbjct: 1 MAEIPQDLVYTRTHEWARIEGDAATVGITDHAQEELGDVVFVELPEVGSSVQAGEPFGTI 60
Query: 91 ESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQA 150
ESVKA SD+ SP+SGEV EVNT L E+P VN PY EGWL++V+ S D L+ P+
Sbjct: 61 ESVKAVSDLYSPVSGEVTEVNTSLEESPEKVNEDPYGEGWLLRVRLSEEPD---LLSPEE 117
Query: 151 YTKFCEEEN 159
Y + EEE
Sbjct: 118 YARRLEEEE 126
>sp|C5BM96|GCSH_TERTT Glycine cleavage system H protein OS=Teredinibacter turnerae
(strain ATCC 39867 / T7901) GN=gcvH PE=3 SV=1
Length = 130
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 31 FSSVLDGLKYASSHEWVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S + LKY SSHEW + E T+GITDHAQ+ LG+VVFVE PE G+ V G GV
Sbjct: 1 MSEIRSELKYLSSHEWARVEEDGTVTIGITDHAQEALGDVVFVETPEVGSQVSAGEEAGV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
VESVKA SD+ SP++GEVI VN L E P VN SPY+EGW KVKPS S+L+ MD +
Sbjct: 61 VESVKAASDIYSPVTGEVIAVNELLEEAPETVNESPYDEGWFFKVKPSDVSELDGAMDSE 120
Query: 150 AYTKFCEEEN 159
AY K E+++
Sbjct: 121 AYVKSVEDDS 130
>sp|Q9HDV9|GCSH_SCHPO Putative glycine cleavage system H protein, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gcv3 PE=1 SV=1
Length = 169
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 90/123 (73%)
Query: 40 YASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDV 99
+ HEWVK +G V TVGIT +A + LGEVVFVELPE +V G G G VESVK+ SDV
Sbjct: 47 FTKEHEWVKVDGDVGTVGITSYAANALGEVVFVELPEPETTVSVGDGIGAVESVKSASDV 106
Query: 100 NSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 159
SP+SG V +N L ++P V+SSP EEGW+ K+K SSP +L+SL++ ++Y +FC+EE+
Sbjct: 107 YSPVSGTVTSINESLGDSPDKVSSSPEEEGWICKIKLSSPDELKSLLNDESYAQFCKEED 166
Query: 160 AAH 162
A+H
Sbjct: 167 ASH 169
>sp|Q6D975|GCSH_ERWCT Glycine cleavage system H protein OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=gcvH
PE=3 SV=1
Length = 130
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA+SHEWV HEG + +VGIT+HAQ+ LG++VF++LPE G V G V
Sbjct: 1 MSNVPTELKYATSHEWVLHEGDGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGEV+EVN L +P LVNS+PY +GWL ++K S SDL+ L+D +
Sbjct: 61 AESVKAASDIYAPISGEVVEVNEDLENSPELVNSAPYTDGWLFRIKISDESDLDELLDAE 120
Query: 150 AYTKFCEEE 158
Y EE+
Sbjct: 121 GYQASLEED 129
>sp|A1JPN4|GCSH_YERE8 Glycine cleavage system H protein OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=gcvH PE=3
SV=1
Length = 128
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYASSHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPADLKYASSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSEVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE+I VN +L +P LVNS+PY +GWL +K S S+L+SL+D +
Sbjct: 61 AESVKAASDIYAPISGEIIAVNAELESSPELVNSAPYTDGWLFSIKASDESELDSLLDAE 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLATIEE 128
>sp|Q9WY55|GCSH_THEMA Glycine cleavage system H protein OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=gcvH PE=1
SV=1
Length = 124
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 85/120 (70%)
Query: 39 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSD 98
KY +HEWV E VATVGIT+HAQ+ LG+VV+V+LPE G VK+G +ESVKA +D
Sbjct: 5 KYTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAAD 64
Query: 99 VNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 158
V +P+SG+++EVN KL P L+N P EGWL K++ S +LE L+D QAY +FC +E
Sbjct: 65 VYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQEFCAQE 124
>sp|A7HQX9|GCSH_PARL1 Glycine cleavage system H protein OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=gcvH PE=3
SV=1
Length = 125
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 87/119 (73%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
+++ HEWV+ +G +AT+GITD+AQ+ LG+VVFVELPE G + G VVESVKA S
Sbjct: 4 IRFTDQHEWVRVDGDIATIGITDYAQEQLGDVVFVELPEVGKDIAAGDEAAVVESVKAAS 63
Query: 98 DVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 156
+V SP+SGEVI+VN+ + +TP VN + +GW IK++ + PS+L+ LMD AY++F E
Sbjct: 64 EVYSPVSGEVIDVNSDIEKTPAGVNENAMGDGWFIKLRLADPSELDKLMDEAAYSEFVE 122
>sp|Q1QWJ4|GCSH_CHRSD Glycine cleavage system H protein OS=Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gcvH
PE=3 SV=1
Length = 131
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 38 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKAT 96
L+Y SHEWV G T+GITDHAQ+ LG+VVFVELPETG + G FGV+ESVKA
Sbjct: 8 LRYTDSHEWVLDNGDGTVTIGITDHAQEALGDVVFVELPETGRELDAGEEFGVIESVKAA 67
Query: 97 SDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 156
SD+ P+SGE+I VN L + P VN +PYE+GW+IK+K + P LESL+D AY
Sbjct: 68 SDLYLPLSGEIIAVNESLEDAPETVNDNPYEDGWIIKLKLAEPEALESLLDATAYDALVS 127
Query: 157 EE 158
E
Sbjct: 128 AE 129
>sp|Q2YWP4|GCSH_STAAB Glycine cleavage system H protein OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=gcvH PE=3 SV=1
Length = 126
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 92/123 (74%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY++ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSNEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|Q6GII3|GCSH_STAAR Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MRSA252) GN=gcvH PE=3 SV=1
Length = 126
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 91/123 (73%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|P64214|GCSH_STAAN Glycine cleavage system H protein OS=Staphylococcus aureus (strain
N315) GN=gcvH PE=1 SV=1
Length = 126
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 91/123 (73%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|P64213|GCSH_STAAM Glycine cleavage system H protein OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=gcvH PE=3 SV=1
Length = 126
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 91/123 (73%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|A5IR11|GCSH_STAA9 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
JH9) GN=gcvH PE=3 SV=1
Length = 126
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 91/123 (73%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|A6TZT7|GCSH_STAA2 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
JH1) GN=gcvH PE=3 SV=1
Length = 126
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 91/123 (73%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|A7X019|GCSH_STAA1 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=gcvH PE=3 SV=1
Length = 126
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 91/123 (73%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S LE+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|A9MRH1|GCSH_SALAR Glycine cleavage system H protein OS=Salmonella arizonae (strain
ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvH PE=3 SV=1
Length = 129
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V
Sbjct: 1 MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +P+SGE++ VN L+++P LVNS PY +GW+ K+K S+ S+LESL+D
Sbjct: 61 AESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYADGWIFKIKASNESELESLLDAT 120
Query: 150 AYTKFCEEE 158
AY E+E
Sbjct: 121 AYEALLEDE 129
>sp|B7NHW5|GCSH_ECO7I Glycine cleavage system H protein OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=gcvH PE=3 SV=1
Length = 129
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V
Sbjct: 1 MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +P+SGE++EVN L+++P LVNS PY GW+ K+K S S+LESL+D
Sbjct: 61 AESVKAASDIYAPVSGEIVEVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDAT 120
Query: 150 AYTKFCEEE 158
AY E+E
Sbjct: 121 AYEALLEDE 129
>sp|Q7MEH8|GCSH_VIBVY Glycine cleavage system H protein OS=Vibrio vulnificus (strain
YJ016) GN=gcvH PE=3 SV=1
Length = 126
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%), Gaps = 1/122 (0%)
Query: 38 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKAT 96
LK+ SHEWV+ G T+GI++HAQ+ LG+VVFVELPE A ++ G F +VESVKA
Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVKAA 64
Query: 97 SDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 156
SD+ +P++GEV+EVN +L+++P L+N PYE GW++KVK S PS+L++L D + Y E
Sbjct: 65 SDIYAPVTGEVVEVNEELSDSPELINEEPYEGGWIVKVKLSDPSELDNLKDAEEYLNSIE 124
Query: 157 EE 158
E+
Sbjct: 125 ED 126
>sp|Q8D7G6|GCSH_VIBVU Glycine cleavage system H protein OS=Vibrio vulnificus (strain
CMCP6) GN=gcvH PE=3 SV=1
Length = 126
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%), Gaps = 1/122 (0%)
Query: 38 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKAT 96
LK+ SHEWV+ G T+GI++HAQ+ LG+VVFVELPE A ++ G F +VESVKA
Sbjct: 5 LKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVKAA 64
Query: 97 SDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 156
SD+ +P++GEV+EVN +L+++P L+N PYE GW++KVK S PS+L++L D + Y E
Sbjct: 65 SDIYAPVTGEVVEVNEELSDSPELINEEPYEGGWIVKVKLSDPSELDNLKDAEEYLNSIE 124
Query: 157 EE 158
E+
Sbjct: 125 ED 126
>sp|C6D8X0|GCSH_PECCP Glycine cleavage system H protein OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=gcvH PE=3 SV=1
Length = 130
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 38 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKAT 96
LKY +SHEWV HEG + +VGIT+HAQ+ LG++VF++LPE G V G V ESVKA
Sbjct: 8 LKYTTSHEWVLHEGGGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAVAESVKAA 67
Query: 97 SDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 156
SD+ +PISGE++EVN L +P LVNS+PY +GWL +++ S SDL+ L+D + Y E
Sbjct: 68 SDIYAPISGEIVEVNDDLESSPELVNSAPYADGWLFRIRISDESDLDELLDAEGYQASLE 127
Query: 157 EE 158
E+
Sbjct: 128 ED 129
>sp|Q5I0P2|GCSH_RAT Glycine cleavage system H protein, mitochondrial OS=Rattus
norvegicus GN=Gcsh PE=2 SV=1
Length = 170
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 103/164 (62%), Gaps = 10/164 (6%)
Query: 1 MALRMWAS--STANALRISCASKTP--------AFALSRCFSSVLDGLKYASSHEWVKHE 50
M+LR+ S + A +LRI+ AS P A R S++L K+ HEWV +
Sbjct: 1 MSLRVVRSVRAVACSLRIALASCPPRPWAPSAAAVRSLRTGSALLSVRKFTEKHEWVTAK 60
Query: 51 GSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEV 110
+ TVGI++ AQ+ LG+VV+ LPE G +K+ FG +ESVKA S++ SP+SGEV EV
Sbjct: 61 DGIGTVGISNFAQEALGDVVYCSLPEVGTKLKKQEEFGALESVKAASELYSPLSGEVTEV 120
Query: 111 NTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 154
N L E PGLVN S YE+GWLIK+ S PS+L+ LM +AY K+
Sbjct: 121 NEALAENPGLVNKSCYEDGWLIKMTLSDPSELDELMSEEAYEKY 164
>sp|Q0VLA7|GCSH_ALCBS Glycine cleavage system H protein OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=gcvH PE=3 SV=1
Length = 128
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 85/121 (70%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
L+YASSHEW K E VATVGI+DHAQD +G++V+VELPE G V G GVVESVKA S
Sbjct: 8 LRYASSHEWAKVEDGVATVGISDHAQDAMGDLVYVELPEVGQVVAAGDETGVVESVKAAS 67
Query: 98 DVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 157
D+ SP+SGE++E+N L + P LVN+ PYE GWL KV+ + +L+SL+ Y +
Sbjct: 68 DIYSPVSGEIVEINEALEDEPELVNNVPYEGGWLFKVQLTDEGELDSLLTADQYQAQIDS 127
Query: 158 E 158
E
Sbjct: 128 E 128
>sp|A7N5C3|GCSH_VIBHB Glycine cleavage system H protein OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=gcvH PE=3 SV=1
Length = 126
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 38 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKAT 96
LK+ SHEWV+ G AT+GI++HAQ+ LG+VVFV+LP+ V+ G F +VESVKA
Sbjct: 5 LKFTDSHEWVRDNGDGTATIGISEHAQEMLGDVVFVDLPDVEDEVEAGESFSLVESVKAA 64
Query: 97 SDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 156
SD+ SPI+GEV+E+N +L ++P L+N PYE GW++KVK S PS+L+ L D + Y E
Sbjct: 65 SDIYSPITGEVVEINEELEDSPELINEEPYEGGWIVKVKLSDPSELDDLKDAEEYLSSIE 124
Query: 157 EE 158
EE
Sbjct: 125 EE 126
>sp|Q8NXH7|GCSH_STAAW Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MW2) GN=gcvH PE=3 SV=1
Length = 126
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 91/123 (73%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|Q6GB23|GCSH_STAAS Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MSSA476) GN=gcvH PE=3 SV=1
Length = 126
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 91/123 (73%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VK S++ +PISG+V+EVN +L ++P VN SPYE+ W++KV+ S S +E+L+ + Y+
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYS 121
Query: 153 KFC 155
+
Sbjct: 122 EMI 124
>sp|A1S966|GCSH_SHEAM Glycine cleavage system H protein OS=Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B) GN=gcvH PE=3 SV=1
Length = 129
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S++ LKYASSHEW++ E TVGIT+HAQ+ LG++VFVELPE G +V G V
Sbjct: 1 MSNIPSELKYASSHEWIRKEDDGTYTVGITEHAQELLGDMVFVELPEVGDTVSAGEDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGEVI VN L ++P LVNS Y +GW ++KPS S+L+SL+D +
Sbjct: 61 AESVKAASDIYAPISGEVIAVNESLEDSPELVNSDAYGDGWFFRIKPSDESELDSLLDAE 120
Query: 150 AYTKFCEEE 158
Y +EE
Sbjct: 121 GYQAVIDEE 129
>sp|B8D1D6|GCSH_HALOH Glycine cleavage system H protein OS=Halothermothrix orenii (strain
H 168 / OCM 544 / DSM 9562) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 82/125 (65%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + L Y +HEW+K +G A VG+TD+AQ LG++VFVELPE Q GF V+ES
Sbjct: 2 NVPENLMYTKNHEWIKVDGDTALVGVTDYAQKELGDIVFVELPEVSDEFAQSEGFAVLES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 152
VKA SDV P+ GEV+E N +L E P LVN PY GWL+K+K + +LE LM + Y
Sbjct: 62 VKAVSDVYLPVGGEVLEANEELLENPELVNQEPYASGWLVKIKLADKKELEDLMSSEEYA 121
Query: 153 KFCEE 157
++ EE
Sbjct: 122 RYLEE 126
>sp|B3DZN7|GCSH_METI4 Glycine cleavage system H protein OS=Methylacidiphilum infernorum
(isolate V4) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 40 YASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDV 99
Y +HEWV G VATVGIT+HAQ L ++V++ELP+ G Q GVVESVKA SD+
Sbjct: 9 YTDTHEWVNVSGDVATVGITEHAQRELSDIVYIELPKVGERFNQKAVVGVVESVKAASDL 68
Query: 100 NSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 158
+P+SGE++ VNT+L E P L+NS+PY EGW+ K+K ++P +L SL D +AY + +++
Sbjct: 69 YAPVSGEILAVNTQLVEQPSLINSNPYGEGWIFKMKMTNPDELSSLKDAEAYQELLQDK 127
>sp|B1JNS7|GCSH_YERPY Glycine cleavage system H protein OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
>sp|Q666R6|GCSH_YERPS Glycine cleavage system H protein OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
>sp|A4TIA6|GCSH_YERPP Glycine cleavage system H protein OS=Yersinia pestis (strain
Pestoides F) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
>sp|Q1CEZ8|GCSH_YERPN Glycine cleavage system H protein OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
>sp|A9R4K7|GCSH_YERPG Glycine cleavage system H protein OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
>sp|Q8ZHI7|GCSH_YERPE Glycine cleavage system H protein OS=Yersinia pestis GN=gcvH PE=3
SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
>sp|B2K0Q4|GCSH_YERPB Glycine cleavage system H protein OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
>sp|Q1CB43|GCSH_YERPA Glycine cleavage system H protein OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
>sp|A7FF20|GCSH_YERP3 Glycine cleavage system H protein OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=gcvH PE=3 SV=1
Length = 128
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA SHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPTELKYALSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSDVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQ 149
ESVKA SD+ +PISGE++ VNT+L +P LVNS+PY +GWL +K + S+L++L+D
Sbjct: 61 AESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDAD 120
Query: 150 AYTKFCEE 157
AY EE
Sbjct: 121 AYLAAIEE 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,751,172
Number of Sequences: 539616
Number of extensions: 2424055
Number of successful extensions: 5613
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 4848
Number of HSP's gapped (non-prelim): 510
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)