BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031295
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis
thaliana GN=At3g48440 PE=1 SV=1
Length = 448
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQ 130
YP RPG DCS+Y+RTG C+FG SCKFNHP+ R+ Q
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQ 142
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSI--NSNTVSI 143
P RPG +C YY+R G C++G CKFNHP P I + +N VSI
Sbjct: 202 PLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSI 251
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 100 GVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPN 148
G+ DC YY RTG C++G +C+FNH +P+ L + N + + + P
Sbjct: 160 GLIDCKYYFRTGGCKYGETCRFNHTIPK--SGLASAPELNFLGLPLRPG 206
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 86 NQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR 127
+QM +F P+RP +CSYY++TG C+F +CK++HP R
Sbjct: 336 HQMPAEEF--PERPDQPECSYYMKTGDCKFKFNCKYHHPKNR 375
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPV--PRQIQSLNQSINSNTVSIEMNPNNSAN 152
P RP + C+YY R G C+FG +C+F+H V P +S + VS N ++ N
Sbjct: 390 PLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPPQVSANGNESDGWN 448
>sp|Q9SQU4|C3H34_ARATH Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis
thaliana GN=At3g06410 PE=2 SV=2
Length = 462
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
YP RPG +CSYYLRTG+C+FG++C+FNHPVP +
Sbjct: 145 YPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAV 179
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
+PQRP +C Y++RTG C+FG SC+++HPV
Sbjct: 304 FPQRPDQPECQYFMRTGDCKFGSSCRYHHPV 334
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
YP+RP DC YYLRTG C +G C+FNHP
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHP 80
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSNR 155
P+R G C +++RTG C+FG SCK++HP ++ + + + P S
Sbjct: 98 PERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYY 157
Query: 156 MSTGK 160
+ TG+
Sbjct: 158 LRTGQ 162
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
P RPGV C+++ + G C+FG +CKF+H
Sbjct: 351 PLRPGVAQCTHFAQHGICKFGPACKFDH 378
>sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis
thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 50 MQNLDIEDPEDQVDSDTEEEVENVDKNNK------QVDEVTGNQMTRRKFCYPQRPGVHD 103
++N+ ++D ++ NV+ +++ Q +E G++ R YP RP D
Sbjct: 48 LRNVGLDDSAKELSVPISVPQGNVETDSRALFGSDQKEEEEGSE-KRMMMVYPVRPDSED 106
Query: 104 CSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIE 144
CS+Y+RTG C++G SCKFNHPV R++Q + + +E
Sbjct: 107 CSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVE 147
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSI 136
P RPG +C +Y+R G C+FG CKFNHP P I ++ +
Sbjct: 192 PIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPL 232
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 86 NQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSI 143
+QM+ +F P+RP +C+YYL+TG C+F CK++HP R + S N + +
Sbjct: 324 HQMSVEEF--PERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPL 379
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQ-SLNQSINSNTVSIEMNPNNS 150
P RP C++Y R G C+FG +C+F+H +P S +Q++ + V N ++S
Sbjct: 378 PLRPDQSMCTHYSRYGICKFGPACRFDHSIPPTFSPSSSQTVEARQVGANGNEDDS 433
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 99 PGVHDCSYYLRTGRCRFGMSCKFNH 123
P + +C YY RTG C++G SC+F+H
Sbjct: 149 PKLMECKYYFRTGGCKYGESCRFSH 173
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa
subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 75 KNNKQVDEVTGNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQ 134
K N D R K YPQR G +C YYL+TG C+FG +CKF+H PR+ ++
Sbjct: 78 KFNHPADRKMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHH--PREKAAIAT 135
Query: 135 SINSNTVSIEMNPNNSANSNRMSTGK 160
+ N + + PN + + TG+
Sbjct: 136 RVQLNALGYPLRPNEKECAYYLRTGQ 161
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
YP+R G DCSYY+RTG CRFGM+CKFNHP R++
Sbjct: 53 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKM 87
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVP 126
YP RP +C+YYLRTG+C+FG +CKF+HP P
Sbjct: 144 YPLRPNEKECAYYLRTGQCKFGSTCKFHHPQP 175
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 85 GNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINS 138
G +R+ +P+RP +C +Y++TG C+FG CKF+HP R I + N +++S
Sbjct: 296 GLYTVQRESIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSS 349
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEM 145
P RPG C++Y R G C+FG +CKF+HP+ + L S + + M
Sbjct: 353 PLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVMYGLATSPTGDVSARRM 402
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa
subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINS 138
YP+R G DCSYY+RTG CRFGM+CKFNHP R++ +N
Sbjct: 63 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNG 106
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSN 154
YP R G +C YYL+TG C+FG +CKF+H PR+ +L + N + M PN +
Sbjct: 108 YPYRVGQPECQYYLKTGTCKFGATCKFHH--PREKAALANRVQLNVLGYPMRPNEKECAY 165
Query: 155 RMSTGK 160
+ TG+
Sbjct: 166 YLRTGQ 171
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 38 PPNSDLDPPPLDMQN---LDIEDPEDQ--VDSDTEEEVENVDKNNKQVDEVTGNQMTRRK 92
PPN L M + PE Q + + T + ++ + N++
Sbjct: 92 PPNRKLAVAAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNV 151
Query: 93 FCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVP 126
YP RP +C+YYLRTG+C+F +CKF+HP P
Sbjct: 152 LGYPMRPNEKECAYYLRTGQCKFASTCKFHHPQP 185
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINS 138
+P+RP +C +Y++TG C+FG CKF+HP R + + N ++NS
Sbjct: 315 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNS 358
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
P RPG C++Y R G C+FG +CKF+HP+
Sbjct: 362 PLRPGEPVCTFYSRYGICKFGPNCKFDHPM 391
>sp|Q8GXX7|C3H33_ARATH Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis
thaliana GN=ZFN1 PE=1 SV=1
Length = 397
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
YP+RPG DCSYY+RTG CRFG +C+FNHP R++
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDREL 71
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR 127
YP R DC+Y+LRTG C+FG +CKFNHP P+
Sbjct: 128 YPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQ 160
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSN 154
YP+R G +C YYL+TG C+FG++CKF+H PR + ++ N + + N +
Sbjct: 82 YPERIGQPECEYYLKTGTCKFGVTCKFHH--PRNKAGIAGRVSLNMLGYPLRSNEVDCAY 139
Query: 155 RMSTG 159
+ TG
Sbjct: 140 FLRTG 144
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 91 RKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQ 128
R+ +P+RPG +C +Y++TG C+FG CKF+HP RQ
Sbjct: 267 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQ 304
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
P RPG C +Y R G C+FG SCKF+HP+
Sbjct: 318 PLRPGEPLCVFYTRYGICKFGPSCKFDHPM 347
>sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa
subsp. japonica GN=Os01g0917400 PE=2 SV=2
Length = 439
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
YP+R G DC+YYLRTG CRFGMSC+FNHP R +
Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNL 111
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 89 TRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPN 148
R K YP+R G +C YYL+TG C+FG +CKF+H PR+ + + NT+ + P+
Sbjct: 116 ARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHH--PREKAGIAGRVQLNTLGYPLRPS 173
Query: 149 NSANSNRMSTGK 160
+ + TG+
Sbjct: 174 EKECAYYLKTGQ 185
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 51 QNLDIEDPEDQVDSDTEEEVENVDKNNKQVDEVTGNQ----------------MTRRKFC 94
Q + + E ++ S ++ ++QVD GNQ +R+
Sbjct: 272 QMMPVSSSESRLQSPGAQQTYGT---SQQVDASAGNQGMLSPYRSSSYPVPQYALQRENV 328
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
+P+RP +C YY++TG C+FG CKF+HP R +
Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSM 363
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSN 154
YP RP +C+YYL+TG+C++G +CKF+HP + N +S I + ++SA +
Sbjct: 168 YPLRPSEKECAYYLKTGQCKYGNTCKFHHP-----ELFNAMASSRGSPIYPSVHSSATAG 222
Query: 155 RMSTG 159
TG
Sbjct: 223 PPYTG 227
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
P RPG C +Y R G C+FG +CKF+HP
Sbjct: 376 PLRPGEELCKFYSRYGICKFGANCKFDHPT 405
>sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa
subsp. japonica GN=Os06g0519400 PE=2 SV=1
Length = 279
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQ 130
+PQRPG HDC +YLR GRC++GM+C+FNHP R Q
Sbjct: 117 HPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQ 152
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
YP+RPGV DCSYY+ G C+FGM C +NHP
Sbjct: 76 YPRRPGVPDCSYYVEFGSCKFGMRCLYNHPA 106
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHP-VPRQIQSLNQSINSNTVSIEMN 146
P RPG CSYY+ G C+FG +CKF+HP + + S+ +N +S +N
Sbjct: 184 PLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSGHEKWDGSLQTNQISSGVN 235
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
YP+ PG DCSYY+RTG CRFG +C+FNHP R++
Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKL 61
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 89 TRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPN 148
R K +P+R G +C YYL+TG C+FG +C+F+H P+ + + N + + PN
Sbjct: 66 ARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHH--PKDKAGVAGRVALNILGYPLRPN 123
Query: 149 NSANSNRMSTGK 160
S + + TG+
Sbjct: 124 ESERAYYLRTGQ 135
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR-QIQSLNQSINSNTVSIEMNPNNSANS 153
YP RP + +YYLRTG+C+FG +CKF+HP P + S+ S TV P + +
Sbjct: 118 YPLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYA 177
Query: 154 NRMS 157
++
Sbjct: 178 AGIT 181
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
+P+RP +C +Y++TG C+FG C+F+HP RQI
Sbjct: 275 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQI 309
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
P RPG C +Y R G C+FG SCKF+HP+
Sbjct: 322 PLRPGEPLCVFYSRYGICKFGPSCKFDHPM 351
>sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis
thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 31/37 (83%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQS 131
+P RPG +CSY++RTG+C+FG +C+++HPVP +Q+
Sbjct: 142 FPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQA 178
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
+PQRP +C Y++RTG C+FG SC+F+HP+
Sbjct: 297 FPQRPEQPECQYFMRTGDCKFGTSCRFHHPM 327
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
+P+RP DC YYLRTG C +G C+FNHP
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHP 77
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSN 154
+P+R G C +++RTG C+FG SCK++HP ++ N + + P S
Sbjct: 94 FPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSY 153
Query: 155 RMSTGK 160
M TG+
Sbjct: 154 FMRTGQ 159
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
P RPG C+++ + G C+FG +CKF+H
Sbjct: 343 PLRPGAVPCTHFAQHGICKFGPACKFDH 370
>sp|Q8L7N8|C3H57_ARATH Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis
thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 89 TRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPN 148
R K YP+R G +C +YL+TG C+FG++CKF+H PR ++ S++ N +S + PN
Sbjct: 78 ARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHH--PRNKAGIDGSVSVNVLSYPLRPN 135
Query: 149 NSANSNRMSTGKA 161
S + G+
Sbjct: 136 EDDCSYFLRIGQC 148
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
YP+R G DC+YY+RTG CRFG +C+FNHP R++
Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKL 73
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 8/57 (14%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSA 151
YP RP DCSY+LR G+C+FG +CKFNHP Q QS N VS+ +P SA
Sbjct: 130 YPLRPNEDDCSYFLRIGQCKFGGTCKFNHP---QTQSTNL-----MVSVRGSPVYSA 178
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQ 128
+P+RPG +C +Y++TG C+FG CKF+HP RQ
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQ 273
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
P RPG C +Y R G C+FG SCKF+HP+
Sbjct: 287 PLRPGEPLCVFYSRYGICKFGPSCKFDHPM 316
>sp|Q9C7P4|C3H9_ARATH Putative zinc finger CCCH domain-containing protein 9
OS=Arabidopsis thaliana GN=At1g29570 PE=4 SV=1
Length = 321
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 81 DEVTGNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR 127
D++ + R+ YP RPG DC +YL+ G CR+ SC+FNHP R
Sbjct: 38 DQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQR 84
>sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp.
japonica GN=Os01g0258700 PE=2 SV=2
Length = 476
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPN 148
+P+RPG DC YY+RTG C+FG +CK++H PR++ + N++ + + P
Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHH--PRELSAPKSGYMVNSLCLPLRPG 355
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
P+RPG DC YYLRTG C FG C++NHP
Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHP 85
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 93 FCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
C P RPG C+YY + G CR+G++CK++HP+
Sbjct: 348 LCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPM 380
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 25/30 (83%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
+P R G +CSYY++TG+C+FG +CKF+HP
Sbjct: 150 FPIRLGEKECSYYMKTGQCKFGTTCKFHHP 179
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 77 NKQVDEVTGNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
++ E G YP+R G C YY++TG C+FG +CK++HP
Sbjct: 87 DRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHP 134
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR 127
+P+RPG DCSYY++ G C+FGM+C+FNHP PR
Sbjct: 87 FPRRPGEPDCSYYVKFGSCKFGMNCRFNHP-PR 118
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR 127
+P+RPG DCSYY++ G C+FG+SC +NHP PR
Sbjct: 41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPR 73
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVP-RQIQSLNQSINSNTVSIEMN 146
P RPG CSYY+ G C+FG +CKF+HP P + S N+N VS ++N
Sbjct: 155 PLRPGTGLCSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNANQVSSQVN 206
>sp|Q941Q3|C3H37_ARATH Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis
thaliana GN=HUA1 PE=1 SV=1
Length = 524
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSAN 152
P+RP C++Y++TG+C+FG+SCKF+HP Q+ S +Q I S +V + P+ + N
Sbjct: 266 PERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGS-SVGLTSEPDATNN 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEM 145
YPQRPG +C YY++TG C+FG CKF+HP R Q+ V + +
Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSL 467
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
YP+RPG DC YY++T RC++G CKFNHP
Sbjct: 222 YPERPGEPDCPYYIKTQRCKYGSKCKFNHP 251
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQS 135
YP+R G +C YY++TG C++G +CKF+HP P ++ + S
Sbjct: 470 YPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEVMAKTTS 510
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
YPQR G DC++Y++T C+FG SC+F+HP+
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHPI 201
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHP-----VPRQIQSLNQS-INSNTVSIEMNPNN 149
P R G DC +YL+TG C++G +C++NHP +P Q +N S ++SNT ++ +
Sbjct: 338 PVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIP-QAAGVNYSLVSSNTANLNLGLVT 396
Query: 150 SANS 153
A S
Sbjct: 397 PATS 400
>sp|Q2QTY2|C3H65_ORYSJ Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa
subsp. japonica GN=Os12g0278800 PE=2 SV=1
Length = 529
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQ 128
+P+RPG DC+YY++ G CRFGM CKFNHP ++
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQS 131
P RPG +C YY+RTG C++ +CKF+HP P + S
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVAS 318
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
YP+RPG +C +++++G C+F M CK++HP
Sbjct: 430 YPERPGQPECQHFVKSGFCKFRMKCKYHHP 459
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
P +P C+YY R G C+FG +C +NHP
Sbjct: 475 PIKPDQPVCTYYGRYGVCKFGPACAYNHP 503
Score = 34.3 bits (77), Expect = 0.31, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 69 EVENVDKNNKQVDEVTGNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQ 128
E+ +V K + E+ + R++F + +C YY G C+FG +CK+ H ++
Sbjct: 209 EIIDVKKGRVEPKELKVAKEKRKEFI-SEGSSQEECKYYSTPGGCKFGKACKYLHRDGKE 267
Query: 129 IQSLNQSINSNTVSIEMNPNNSANSNRMSTG 159
++ + ++ N + + + P M TG
Sbjct: 268 GKTDAEKVDLNFLGLPLRPGEKECPYYMRTG 298
>sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis
thaliana GN=At2g47850 PE=2 SV=2
Length = 468
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 93 FCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVP 126
+ YP R G ++CSYYL+TG+C+FG++CKF+HP P
Sbjct: 131 YGYPVREGDNECSYYLKTGQCKFGITCKFHHPQP 164
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
+P+RPG +C YYL+TG C+FG SCKF+HP
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHP 315
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
YP+RPG DC+YY+RTG C +G C++NHP
Sbjct: 42 YPERPGAPDCAYYMRTGVCGYGNRCRYNHP 71
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 72 NVDKNNKQVDEVTGNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
N + N D + R YP+R G C +YL+TG C+FG SCKF+HP
Sbjct: 64 NRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHP 116
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
P RPGV C++Y++ G C+FG +CKF+HP+
Sbjct: 333 PLRPGVQRCTFYVQNGFCKFGSTCKFDHPM 362
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp.
japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 54 DIEDPEDQVDSDTEEEVENVDKNNKQVDEVTGNQMT----RRKF---CYPQRPGVHDCSY 106
DIE P Q + ++ VE D V+ T ++F P RPG DC +
Sbjct: 237 DIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPF 296
Query: 107 YLRTGRCRFGMSCKFNHP 124
Y++ G C+FG +C+FNHP
Sbjct: 297 YMKMGSCKFGSTCRFNHP 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
YPQRPG DC++Y+ T C+FG SCKF+HP
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHP 131
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR 127
YPQRPG C +Y++TG C+F CKF+HP+ R
Sbjct: 364 YPQRPGATVCDFYMKTGFCKFADRCKFHHPIDR 396
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
YP++ G DC ++++TG+C+FG CKFNHP
Sbjct: 153 YPEQEGEPDCPFFMKTGKCKFGSKCKFNHP 182
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQ 128
P+R C++Y++TG C+FGM CKF+HP P++
Sbjct: 420 PRREDAVVCAFYMKTGVCKFGMQCKFDHPPPQE 452
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI-QSLNQSINSNTVSIEMNPNNSANS 153
P RP CS+Y +TG+C+F CKFNHP +I S N+ ++ TV E + ++A+S
Sbjct: 207 PVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADS 265
>sp|O48772|C3H26_ARATH Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis
thaliana GN=ZFN2 PE=2 SV=1
Length = 453
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 10/71 (14%)
Query: 64 SDTEEEVENVDKNNKQVDEVTGNQMTRRKF---------CYPQRPGVHDCSYYLRTGRCR 114
S+T+++V+N + + D++ + R K YP RPG DC ++LRTG+C
Sbjct: 2 SETQQQVQNSTGSIRSPDKIE-DTFRRMKVNEDNMEQSSPYPDRPGERDCQFFLRTGQCG 60
Query: 115 FGMSCKFNHPV 125
+G SC++NHP+
Sbjct: 61 YGNSCRYNHPL 71
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR 127
P R G C YY++TG CRFG++CKF+HP P
Sbjct: 127 PMRQGEKPCPYYMQTGLCRFGVACKFHHPHPH 158
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 103 DCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSNRMSTG 159
+C +++ TG C++G CK++HP R +QS +N + + P A N + G
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNP--IVLPARPGQPACGNFKAYG 320
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
P RPG C + G C+FG +CKF+H
Sbjct: 305 PARPGQPACGNFKAYGFCKFGANCKFDH 332
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPR 127
P+R G DC TG C++G +CK++HP R
Sbjct: 86 PERVGQPDC----ETGACKYGPTCKYHHPKDR 113
>sp|Q94AD9|C3H3_ARATH Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis
thaliana GN=At1g04990 PE=2 SV=1
Length = 404
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPV 125
YP RPG DC +YLRTG C +G SC++NHP
Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPT 74
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINS 138
P R G C YYLRTG CRFG++CKF+HP P S ++S
Sbjct: 133 PMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSS 175
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEM 145
P+R G DC Y+L+TG C++G +CK++HP R Q + N + + M
Sbjct: 88 PERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGA---QPVMFNVIGLPM 134
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 93 FCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHP-VPRQIQSLNQSINSNTVS-------IE 144
F P RPG C + G C+FG +CKF+HP +P ++ S+ + S I
Sbjct: 302 FVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLPTPFASPVTTHQRIS 361
Query: 145 MNPNNSANSNRMSTGK 160
PN S +S +S GK
Sbjct: 362 PTPNRS-DSKSLSNGK 376
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 103 DCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSNRMSTG 159
+C +++ TG C++G CK++HP R Q I N + P A N S G
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLI--NPFVLPARPGQPACGNFRSYG 320
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp.
japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIE 144
P+RPG DC YYLRTG C +G +C++NHP R ++ T S E
Sbjct: 49 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAE 97
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSIN 137
YP R G DC+YY++TG C+FG +CKF+HP +I ++++ N
Sbjct: 142 YPLRSGEKDCTYYVKTGHCKFGSTCKFHHP---EIGGVSETPN 181
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
+P RPG +C YYL+TG C+FG +CK++HP
Sbjct: 296 FPARPGQPECQYYLKTGSCKFGSACKYHHP 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 72 NVDKNNKQVDEVTGNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQS 131
N ++ + G T YP+RPG C YY++ G C+FG +CK++HP +Q+
Sbjct: 75 NHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQA 134
Query: 132 L 132
+
Sbjct: 135 V 135
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVS 142
P RPG C+YY + G C+FG +CKF+HP + +L+ S ++++++
Sbjct: 343 PLRPGSQPCAYYTQHGFCKFGPTCKFDHP----MGTLSYSPSASSIT 385
>sp|Q3ECU8|C3H13_ARATH Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis
thaliana GN=At1g48195 PE=4 SV=1
Length = 82
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 88 MTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHP 124
M+ KF P+RPG +CSYYLRTG C +CK++HP
Sbjct: 1 MSEEKF--PERPGEPECSYYLRTGNCYLKQNCKYHHP 35
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
P RPG C +Y R G CR G +CKF+H
Sbjct: 53 PLRPGQAICPHYSRFGICRSGPTCKFDH 80
>sp|A3CEM4|C3H64_ORYSJ Putative zinc finger CCCH domain-containing protein 64 OS=Oryza
sativa subsp. japonica GN=Os12g0129500 PE=4 SV=2
Length = 527
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 95 YPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIE 144
YP+RPG C YY++ G C+ CK+NHP R +I S ++ +
Sbjct: 210 YPERPGEPFCRYYMKFGECKHMTFCKYNHPKDRFSCKTTNTIRSESLCLH 259
>sp|Q6AXL8|ZMAT5_DANRE Zinc finger matrin-type protein 5 OS=Danio rerio GN=zmat5 PE=2 SV=1
Length = 173
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSNR 155
C +++TG+C FG SC+F+H +Q++ L Q I+ E +P+ +S R
Sbjct: 57 CRKFVQTGQCVFGTSCRFSHMSEKQMKMLEQKIDDEKRQKE-DPDQDGSSER 107
>sp|Q6K687|C3H18_ORYSJ Zinc finger CCCH domain-containing protein 18 OS=Oryza sativa
subsp. japonica GN=Os02g0793000 PE=2 SV=1
Length = 504
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 34 QLSLPPNSDLDPPPLDMQNLDIEDPEDQVDSDTEEEVENVDKNNKQVDEVTGNQMTRRKF 93
++++ P D++P PL+ Q E V S ++ N V + G+ R F
Sbjct: 89 EVAVDPPDDVEPEPLEPQ-------EFSVGSKCRFRHKDGRWYNGCVIGLEGSSDARISF 141
Query: 94 CYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQ 134
P + C ++L+ RCRFG +C+ +H + I SL Q
Sbjct: 142 LTPTSENMSMCKFFLQQ-RCRFGSNCRLSHGIVIPILSLKQ 181
>sp|Q9C7P1|C3H10_ARATH Putative zinc finger CCCH domain-containing protein 10
OS=Arabidopsis thaliana GN=At1g29600/At1g29610 PE=2 SV=2
Length = 389
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 94 CYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQI 129
YP RPG +C +Y++ C +G C +NHP ++I
Sbjct: 127 AYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPLQEI 162
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVP 126
C +YL+ G C+FG CKF H VP
Sbjct: 305 CKFYLK-GNCKFGSKCKFKHEVP 326
>sp|Q17QX2|ZGPAT_BOVIN Zinc finger CCCH-type with G patch domain-containing protein OS=Bos
taurus GN=ZGPAT PE=2 SV=1
Length = 513
Score = 35.8 bits (81), Expect = 0.14, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 85 GNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
G+ R + YP + CS++L G+CRF +C+F+H
Sbjct: 162 GSPGVRVLYLYPTHKSLKPCSFFLE-GKCRFQENCRFSH 199
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVP 126
C +YL+ G C+FG C+F H VP
Sbjct: 305 CKFYLK-GNCKFGSKCRFKHEVP 326
>sp|Q8L7S3|C3H24_ARATH Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis
thaliana GN=At2g28450 PE=2 SV=1
Length = 809
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 33 TQLSLPPNSDLDPPPLDMQNLDIEDPEDQVDSDTEEEVENVDKNNKQVDE--VTGNQMTR 90
T+ PP S ++P P++ ++D E P DS+ + +E V + K+ DE T + +
Sbjct: 15 TKTQTPPAS-VEPIPMETSSID-ELPSS--DSNATDNIEAVGEKRKRADEDEKTNLESSD 70
Query: 91 RKFCYPQ-RPGVHDCSYYLRTGRCRFGMSCKFNH 123
K P CSY+ R C G CK+ H
Sbjct: 71 TKITTPSPWWKTSLCSYFRREASCSHGNECKYAH 104
>sp|Q8N5A5|ZGPAT_HUMAN Zinc finger CCCH-type with G patch domain-containing protein
OS=Homo sapiens GN=ZGPAT PE=1 SV=3
Length = 531
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 85 GNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQ 134
G+ R + YP + C ++L G+CRF +C+F+H Q+ SL++
Sbjct: 161 GSAGVRVLYLYPTHKSLKPCPFFLE-GKCRFKENCRFSHG---QVVSLDE 206
>sp|Q2TA39|ZMAT5_BOVIN Zinc finger matrin-type protein 5 OS=Bos taurus GN=ZMAT5 PE=2 SV=1
Length = 170
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEM 145
C +L TG+C FG +C+F+H R +Q L+ + + E
Sbjct: 57 CRKFLLTGQCDFGSNCRFSHMSERDLQELSVQVEEERRAREW 98
>sp|Q9UDW3|ZMAT5_HUMAN Zinc finger matrin-type protein 5 OS=Homo sapiens GN=ZMAT5 PE=1
SV=1
Length = 170
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEM 145
C +L TG+C FG +C+F+H R +Q L+ + + E
Sbjct: 57 CRKFLLTGQCDFGSNCRFSHMSERDLQELSIQVEEERRAREW 98
>sp|Q28H71|ZGPAT_XENTR Zinc finger CCCH-type with G patch domain-containing protein
OS=Xenopus tropicalis GN=zgpat PE=2 SV=1
Length = 514
Score = 34.7 bits (78), Expect = 0.29, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 85 GNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
G R + YP + C ++L G+CRF SC+F+H
Sbjct: 157 GEAGVRVLYLYPTHKAMKPCPFFL-DGKCRFDDSCRFSH 194
>sp|A8NZY7|DUS3_COPC7 tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=DUS3 PE=3 SV=1
Length = 676
Score = 33.5 bits (75), Expect = 0.52, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 21/118 (17%)
Query: 36 SLPPNSDLDPPPLDMQNLDIEDPEDQVDSDTEEEVENVDKNNKQVDEVTGN-QMTRRKFC 94
+LPP + P+ Q L P+ D D E ++ K+ + ++ +GN Q +RR
Sbjct: 3 TLPPGT----APIKPQYLLSTKPQAIPDDDAAEGTTSIVKSAGRGEDDSGNGQPSRRALA 58
Query: 95 YPQRPGVHDCSYYLRTGR----------------CRFGMSCKFNHPVPRQIQSLNQSI 136
Q+ + R G+ C FG SC+F H + I+ Q +
Sbjct: 59 KAQKKARQGANKGRRFGKVRDEVELCWKVANGAICDFGTSCRFTHDIAEYIKEKPQDL 116
>sp|Q5PPF5|ZGPAT_RAT Zinc finger CCCH-type with G patch domain-containing protein
OS=Rattus norvegicus GN=Zgpat PE=2 SV=1
Length = 507
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 85 GNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
G+ R + YP + C ++L G+CRF +C+F+H
Sbjct: 156 GSACVRVLYLYPTHKSLKPCPFFLE-GKCRFKENCRFSH 193
>sp|C5IJB0|ZGPAT_SHEEP Zinc finger CCCH-type with G patch domain-containing protein
OS=Ovis aries GN=ZGPAT PE=2 SV=1
Length = 513
Score = 33.5 bits (75), Expect = 0.60, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 85 GNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
G+ R + YP + C ++L G+CRF +C+F+H
Sbjct: 162 GSPGVRVLYLYPTHKSLKPCPFFLE-GKCRFQENCRFSH 199
>sp|Q8VDM1|ZGPAT_MOUSE Zinc finger CCCH-type with G patch domain-containing protein OS=Mus
musculus GN=Zgpat PE=2 SV=1
Length = 511
Score = 33.1 bits (74), Expect = 0.74, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 85 GNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
G+ R + YP + C ++L G+CRF +C+F+H
Sbjct: 160 GSACVRVLYLYPTHKSLKPCPFFLE-GKCRFKENCRFSH 197
>sp|Q9CQR5|ZMAT5_MOUSE Zinc finger matrin-type protein 5 OS=Mus musculus GN=Zmat5 PE=2
SV=1
Length = 170
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEM 145
C +L TG+C FG +C+F+H + +Q L+ + + E
Sbjct: 57 CRKFLLTGQCDFGSNCRFSHMSEQDLQELSVQVEEERRAREW 98
>sp|O74315|AMO1_SCHPO Nucleoporin-like protein amo1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=amo1 PE=4 SV=1
Length = 475
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSIN 137
C Y+L+ RCR+G +CK H VP Q+ +N
Sbjct: 4 CKYFLQN-RCRYGTNCKNQHTVPSNGQNAFSKVN 36
>sp|Q0JP11|C3H3_ORYSJ Zinc finger CCCH domain-containing protein 3 OS=Oryza sativa subsp.
japonica GN=Os01g0252200 PE=2 SV=2
Length = 167
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 96 PQRPGVHDCSYYLRTGRCRFGMSCKFNH 123
P + C +++RTG C+FG SC++ H
Sbjct: 61 PGAAAIGVCQHFVRTGTCKFGDSCRYFH 88
>sp|C0HAV3|ZGPAT_SALSA Zinc finger CCCH-type with G patch domain-containing protein
OS=Salmo salar GN=zgpat PE=2 SV=1
Length = 527
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 71 ENVDKNNKQVDEVTGNQMTRRKFCYPQRPGVHDCSYYLRTGRCRFGMSCKFNHPVPRQIQ 130
E+ D+N QV R + +P + + C ++L +CRF +C+F+H +
Sbjct: 155 ESCDRNEAQV---------RVLYVHPTQKSMKPCPFFLED-KCRFADNCRFSHGEVVYVS 204
Query: 131 SLNQSINSNTVSIE 144
L + + S+ +++
Sbjct: 205 ELREFLESDLTNLQ 218
>sp|Q750F8|SPB4_ASHGO ATP-dependent rRNA helicase SPB4 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SPB4
PE=3 SV=2
Length = 599
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 27 EENRYYTQLSLPPNSDLDPPPLDMQNLDIEDPE-DQVDSDTEEEVENVDKNNKQVDEVTG 85
E RY ++ ++P + L PP+D+ + DP+ ++ ++E ++V NNK E+
Sbjct: 469 EIQRYLSKDAIPEDGWLVSPPIDLDSFAYADPQREKARKLAKKEAKDVKDNNKLKSEMRK 528
Query: 86 N 86
N
Sbjct: 529 N 529
>sp|Q7XPK1|C3H31_ORYSJ Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa
subsp. japonica GN=Os04g0665700 PE=2 SV=1
Length = 309
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSIN------SNTVSIEMNPNNSANSNRMS 157
C+ + T C FG C F+H VP Q++ +++N M+ NS+ S
Sbjct: 43 CTKFFSTIGCPFGEGCHFSHFVPGGYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPAS 102
Query: 158 TGK 160
+GK
Sbjct: 103 SGK 105
>sp|O74984|HSP15_SCHPO Heat shock protein homolog C338.06c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC338.06c PE=3 SV=1
Length = 139
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 53 LDIEDPEDQVDSDTEEEVENVDKNNKQVDEVTGNQMT---RRKFCYPQRPGVHDCSYYLR 109
L++ + ED ++ D E V +DK N +VD + G+++T RK +P +R
Sbjct: 36 LELRETEDTIEVDVE--VPGIDKQNLKVD-LHGSKLTISGERK-----KPEEEKAGPLIR 87
Query: 110 -TGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANSNRM 156
+ RC S P P + ++ S+N+ +SI M N + R+
Sbjct: 88 WSERCVGAFSRTITLPQPVDEKLIHASLNNGILSIVMKKKNPEFTTRI 135
>sp|Q9FL40|C3H53_ARATH Zinc finger CCCH domain-containing protein 53 OS=Arabidopsis
thaliana GN=At5g07060 PE=2 SV=1
Length = 363
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 54 DIEDPEDQVDSDTEEEVENVDKNNKQVDEVTGNQMTRRKFCYPQ-RPGVHDCSYYLRTGR 112
D DP+ + D E + N+ + ++ RR Y + RP + CS+Y G+
Sbjct: 117 DEHDPKTRAGLDYESSFGKMQPNDTIL------KLQRRTPSYEKNRPKI--CSFYT-IGQ 167
Query: 113 CRFGMSCKFNHPVPRQIQSLNQSINSNTVSI 143
C+ G C F H +P + +Q+I S+
Sbjct: 168 CKRGAECSFRHEMPETGELSHQNIRDRYYSV 198
>sp|Q9SK49|C3H22_ARATH Zinc finger CCCH domain-containing protein 22 OS=Arabidopsis
thaliana GN=At2g24830 PE=2 SV=1
Length = 497
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 51 QNLDIEDPEDQVDSDTEE-EVENVDKN--NKQVDEVTGNQMTRRKFCYPQRPGVHDCSYY 107
++L+ E E++ D D + + D N ++ G+ + F P + C ++
Sbjct: 86 EHLEPEKTEEKKDLDGSKCRFRHTDGRWYNGRIIGFEGSDSAKISFLTPTSESMMICKFF 145
Query: 108 LRTGRCRFGMSCKFNHPVPRQIQSL 132
++ RCRFG SC+ +H + I SL
Sbjct: 146 MQQ-RCRFGSSCRSSHGLDVPISSL 169
>sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo sapiens
GN=ZC3H13 PE=1 SV=1
Length = 1668
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 104 CSYYLRTGRCRFGMSCKFNH-PVPR 127
C +L+TG C +G +C+F H P PR
Sbjct: 42 CRNWLKTGNCLYGNTCRFVHGPSPR 66
>sp|Q6YVX9|C3H16_ORYSJ Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa
subsp. japonica GN=Os02g0557500 PE=2 SV=2
Length = 678
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVP 126
C ++L+TG CRFG+ C H P
Sbjct: 169 CPFHLKTGACRFGVRCSRVHFYP 191
>sp|O74463|YQC1_SCHPO Uncharacterized protein C1739.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1739.01 PE=1 SV=2
Length = 547
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 104 CSYYLRTGRCRFGMSCKFNHPVPRQIQSLNQSINSNTVSIEMNPNNSANS 153
C Y+L+ G C+FG C +H +P L ++NT++ M N A+S
Sbjct: 74 CKYFLK-GNCKFGPKCALSHALPGNTN-LPNGTSTNTMA-SMAANGGASS 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,980,752
Number of Sequences: 539616
Number of extensions: 2825767
Number of successful extensions: 14471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 14042
Number of HSP's gapped (non-prelim): 513
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)