Your job contains 1 sequence.
>031304
MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK
HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP
PPRDEDIYPQSPDLGIDQMIGKMEIPGSFSFHWQVDRYDMLG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031304
(162 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127968 - symbol:WOX13 "AT4G35550" species:370... 354 3.5e-36 2
TAIR|locus:2030467 - symbol:WOX14 "AT1G20700" species:370... 312 6.4e-28 1
TAIR|locus:2030487 - symbol:WOX10 "AT1G20710" species:370... 290 1.4e-25 1
TAIR|locus:2057614 - symbol:HB-3 "homeobox-3" species:370... 165 1.1e-11 1
TAIR|locus:2088550 - symbol:WOX1 "WUSCHEL related homeobo... 160 3.3e-11 1
UNIPROTKB|Q33DK1 - symbol:WOX3 "WUSCHEL-related homeobox ... 154 3.5e-11 1
TAIR|locus:2065484 - symbol:PRS "PRESSED FLOWER" species:... 153 4.9e-11 1
TAIR|locus:2096429 - symbol:WOX11 "AT3G03660" species:370... 154 9.3e-11 1
TAIR|locus:2825767 - symbol:WOX4 "WUSCHEL related homeobo... 149 1.8e-10 1
TAIR|locus:2049547 - symbol:PFS2 "PRETTY FEW SEEDS 2" spe... 148 3.2e-10 1
TAIR|locus:2060902 - symbol:WUS "AT2G17950" species:3702 ... 149 3.2e-10 1
TAIR|locus:2161353 - symbol:WOX8 "AT5G45980" species:3702... 148 5.7e-10 1
TAIR|locus:2168504 - symbol:WOX2 "WUSCHEL related homeobo... 145 6.0e-10 1
UNIPROTKB|Q33DK0 - symbol:WOX1B "WUSCHEL-related homeobox... 139 4.1e-09 1
TAIR|locus:2175941 - symbol:WOX12 "AT5G17810" species:370... 135 9.3e-09 1
TAIR|locus:2074638 - symbol:WOX5 "WUSCHEL related homeobo... 131 9.7e-09 1
TAIR|locus:2166434 - symbol:WOX7 "AT5G05770" species:3702... 125 4.2e-08 1
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 114 6.1e-07 1
TAIR|locus:2161388 - symbol:AT5G46010 species:3702 "Arabi... 97 3.9e-05 1
RGD|1308265 - symbol:Dmbx1 "diencephalon/mesencephalon ho... 113 4.3e-05 1
UNIPROTKB|E1BF87 - symbol:PRRX2 "Uncharacterized protein"... 104 0.00011 1
UNIPROTKB|F1PL78 - symbol:DMBX1 "Uncharacterized protein"... 110 0.00013 1
MGI|MGI:2153518 - symbol:Dmbx1 "diencephalon/mesencephalo... 110 0.00014 1
UNIPROTKB|J9NS81 - symbol:DMBX1 "Uncharacterized protein"... 110 0.00015 1
UNIPROTKB|F1RQG1 - symbol:PRRX2 "Uncharacterized protein"... 106 0.00016 1
UNIPROTKB|F1PF43 - symbol:VAX2 "Uncharacterized protein" ... 99 0.00018 2
UNIPROTKB|F1NL46 - symbol:MIXL1 "Uncharacterized protein"... 91 0.00019 1
UNIPROTKB|F1NZI9 - symbol:PRRX2 "Paired mesoderm homeobox... 102 0.00021 1
UNIPROTKB|Q90963 - symbol:PRRX2 "Paired mesoderm homeobox... 102 0.00021 1
UNIPROTKB|F8VU08 - symbol:HHEX "Hematopoietically-express... 87 0.00059 1
UNIPROTKB|H0YIZ3 - symbol:PRRX2 "Paired mesoderm homeobox... 99 0.00060 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 99 0.00060 1
UNIPROTKB|F1MR77 - symbol:DMBX1 "Uncharacterized protein"... 105 0.00074 1
UNIPROTKB|F1S3W3 - symbol:DMBX1 "Uncharacterized protein"... 105 0.00076 1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991... 103 0.00078 1
UNIPROTKB|Q9UIW0 - symbol:VAX2 "Ventral anterior homeobox... 98 0.00081 2
ZFIN|ZDB-GENE-000223-14 - symbol:phox2a "paired-like home... 103 0.00083 1
RGD|621133 - symbol:Vax2 "ventral anterior homeobox 2" sp... 98 0.00083 2
UNIPROTKB|Q9JLZ9 - symbol:Vax2 "Ventral anterior homeobox... 98 0.00083 2
>TAIR|locus:2127968 [details] [associations]
symbol:WOX13 "AT4G35550" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL161587 EMBL:AL031135 HOGENOM:HOG000070737 EMBL:AY251404
EMBL:AY048268 EMBL:BT000538 IPI:IPI00543316 PIR:T04660
RefSeq:NP_195280.1 UniGene:At.2408 UniGene:At.50397
ProteinModelPortal:O81788 SMR:O81788 PRIDE:O81788
EnsemblPlants:AT4G35550.1 GeneID:829707 KEGG:ath:AT4G35550
TAIR:At4g35550 eggNOG:NOG283530 InParanoid:O81788 OMA:VEMHKTL
PhylomeDB:O81788 ProtClustDB:CLSN2916183 Genevestigator:O81788
GermOnline:AT4G35550 Uniprot:O81788
Length = 268
Score = 354 (129.7 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 73/121 (60%), Positives = 85/121 (70%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
RMG Y DP ++S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+D+T EL++H
Sbjct: 77 RMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQH 136
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVP---NNAESEAETVTHA--ESRKQNPESIQSLE 116
GQI+E NVYNWFQNRRAR KRKQ G NN ESE ET A E R PES+ L
Sbjct: 137 GQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALNEKRVVRPESLLGLP 196
Query: 117 D 117
D
Sbjct: 197 D 197
Score = 52 (23.4 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 122 PRDEDIYPQSPDLGID-------------QMIGKMEIPGSFSFHWQVDRYDMLG 162
PR ED+ QSP++ D ++GKM + S++ + V+ Y M G
Sbjct: 215 PRPEDLCFQSPEISSDLHLLDVLSNPRDEHLVGKMGLAESYNLYDHVEDYGMSG 268
>TAIR|locus:2030467 [details] [associations]
symbol:WOX14 "AT1G20700" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010072 "primary shoot apical meristem
specification" evidence=IMP] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
EMBL:AC069251 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0010072 HOGENOM:HOG000070737
ProtClustDB:CLSN2914683 eggNOG:NOG283530 EMBL:AJ441297
IPI:IPI00533426 RefSeq:NP_173493.2 UniGene:At.41695
ProteinModelPortal:Q9LM84 SMR:Q9LM84 EnsemblPlants:AT1G20700.1
GeneID:838660 KEGG:ath:AT1G20700 TAIR:At1g20700 InParanoid:Q9LM84
OMA:SHRISTR PhylomeDB:Q9LM84 Genevestigator:Q9LM84
GermOnline:AT1G20700 Uniprot:Q9LM84
Length = 211
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 71/142 (50%), Positives = 89/142 (62%)
Query: 7 YFDPFVASGSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQIS 65
YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ EL++HGQI+
Sbjct: 77 YFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQIT 136
Query: 66 ETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDE 125
ETNVYNWFQNRRAR KRKQ N +++ VT E R S DS E
Sbjct: 137 ETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGLESYE 188
Query: 126 DIYPQSPDLGIDQM--IGK-ME 144
I SPDLGI+ + IGK ME
Sbjct: 189 HILFPSPDLGIEHLLSIGKFME 210
>TAIR|locus:2030487 [details] [associations]
symbol:WOX10 "AT1G20710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
EMBL:AC069251 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 IPI:IPI00538890 PIR:G86339 RefSeq:NP_173494.1
UniGene:At.51695 ProteinModelPortal:Q9LM83 SMR:Q9LM83
EnsemblPlants:AT1G20710.1 GeneID:838661 KEGG:ath:AT1G20710
TAIR:At1g20710 eggNOG:NOG325202 HOGENOM:HOG000070737
InParanoid:Q9LM83 OMA:NPRRIKE PhylomeDB:Q9LM83
ProtClustDB:CLSN2914683 Genevestigator:Q9LM83 Uniprot:Q9LM83
Length = 197
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 62/142 (43%), Positives = 88/142 (61%)
Query: 3 MGNPYFDPFVASGSQK-LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
M YFDP VAS S ++ R RWTPT QLQILE++Y E GTP ++I+++T EL++H
Sbjct: 57 MRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEH 116
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVP-NNAESEAETVTHAESRKQNPESIQSLEDSAP 120
GQI E NVY+WFQNRRAR KRKQ +++++ VT E R + + E
Sbjct: 117 GQIMEKNVYHWFQNRRARSKRKQPPTTTITSSQADDAAVTTTEERGRCGDDSGGFESY-- 174
Query: 121 PPRDEDIYPQSPDLGIDQMIGK 142
+ ++P SPDLGI+ ++ +
Sbjct: 175 ---EHILFP-SPDLGIEHLLNR 192
>TAIR|locus:2057614 [details] [associations]
symbol:HB-3 "homeobox-3" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010075 "regulation of meristem
growth" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0010093 "specification of floral organ identity" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0048440
"carpel development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009735 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:U78721 GO:GO:0010075 HOGENOM:HOG000154860
ProtClustDB:CLSN2680017 EMBL:AY251401 EMBL:AK118501 EMBL:BT005296
IPI:IPI00546241 PIR:G84750 RefSeq:NP_180944.2 UniGene:At.14699
ProteinModelPortal:Q6X7J4 SMR:Q6X7J4 IntAct:Q6X7J4
EnsemblPlants:AT2G33880.1 GeneID:817958 KEGG:ath:AT2G33880
TAIR:At2g33880 eggNOG:NOG331259 InParanoid:Q6X7J4 OMA:QHGASYY
PhylomeDB:Q6X7J4 Genevestigator:Q6X7J4 GermOnline:AT2G33880
Uniprot:Q6X7J4
Length = 378
Score = 165 (63.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 38/133 (28%), Positives = 69/133 (51%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 82 RKQSGVVPNNAESEAETVTHAE---SRKQNPESIQSLEDSAPPPRDEDIYPQSPDLGIDQ 138
K + ++ S +T + S + S S S P + ++ + LG Q
Sbjct: 113 HKLRLLHNHSKHSLPQTQPQPQPQPSASSSSSSSSSSSKSTKPRKSKNKNNTNLSLGGSQ 172
Query: 139 MIGKMEIPGSFSF 151
M+G +F F
Sbjct: 173 MMGMFPPEPAFLF 185
>TAIR|locus:2088550 [details] [associations]
symbol:WOX1 "WUSCHEL related homeobox 1" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048513 "organ development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048513
EMBL:AB019230 EMBL:AY251394 IPI:IPI00529632 RefSeq:NP_188428.3
UniGene:At.49388 ProteinModelPortal:Q6X7K0 SMR:Q6X7K0 PaxDb:Q6X7K0
PRIDE:Q6X7K0 EnsemblPlants:AT3G18010.1 GeneID:821325
KEGG:ath:AT3G18010 TAIR:At3g18010 eggNOG:NOG308045
HOGENOM:HOG000090885 InParanoid:Q6X7K0 OMA:DEGELQH PhylomeDB:Q6X7K0
ProtClustDB:CLSN2920267 Genevestigator:Q6X7K0 Uniprot:Q6X7K0
Length = 350
Score = 160 (61.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 34/85 (40%), Positives = 49/85 (57%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 84 QSGVVPNNAESEAETVTHAESRKQN 108
+ + E ETV S N
Sbjct: 136 RRRQMETGHE---ETVLSTASLVSN 157
>UNIPROTKB|Q33DK1 [details] [associations]
symbol:WOX3 "WUSCHEL-related homeobox 3" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:DP000010 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CM000148
EMBL:DP000011 eggNOG:NOG302146 EMBL:AB218893 EMBL:AM234748
ProteinModelPortal:Q33DK1 IntAct:Q33DK1
EnsemblPlants:LOC_Os11g01130.1 EnsemblPlants:LOC_Os12g01120.1
Gramene:Q33DK1 OMA:SNQLEEW Uniprot:Q33DK1
Length = 203
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63
Query: 80 LKRK 83
+++
Sbjct: 64 ERQR 67
>TAIR|locus:2065484 [details] [associations]
symbol:PRS "PRESSED FLOWER" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009908 "flower development" evidence=IMP]
[GO:0009943 "adaxial/abaxial axis specification" evidence=IMP]
[GO:0009947 "centrolateral axis specification" evidence=IMP]
[GO:0010865 "stipule development" evidence=IMP] [GO:0048513 "organ
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009908 EMBL:AC007171 EMBL:AB058920
EMBL:AY251397 IPI:IPI00536433 PIR:A84687 RefSeq:NP_180429.1
UniGene:At.28458 ProteinModelPortal:Q9SIB4 SMR:Q9SIB4 STRING:Q9SIB4
PRIDE:Q9SIB4 EnsemblPlants:AT2G28610.1 GeneID:817410
KEGG:ath:AT2G28610 TAIR:At2g28610 eggNOG:NOG302146
InParanoid:Q9SIB4 OMA:PVASTRW ProtClustDB:CLSN2913193
Genevestigator:Q9SIB4 GO:GO:0009943 GO:GO:0009947 GO:GO:0010865
Uniprot:Q9SIB4
Length = 244
Score = 153 (58.9 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARD 64
Query: 81 KRK 83
++K
Sbjct: 65 RQK 67
>TAIR|locus:2096429 [details] [associations]
symbol:WOX11 "AT3G03660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002686 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC009327
HOGENOM:HOG000064623 ProtClustDB:CLSN2680059 IPI:IPI00891503
RefSeq:NP_001118563.1 UniGene:At.40942 ProteinModelPortal:B3H5D3
SMR:B3H5D3 EnsemblPlants:AT3G03660.2 GeneID:821196
KEGG:ath:AT3G03660 OMA:ILESIFH ArrayExpress:B3H5D3
Genevestigator:B3H5D3 Uniprot:B3H5D3
Length = 297
Score = 154 (59.3 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 34/92 (36%), Positives = 50/92 (54%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 69 VYNWFQNRRARLKRKQSGVVPNNAESEAETVT 100
V+ WFQNRR+R +R+Q + A ++A T T
Sbjct: 78 VFYWFQNRRSRSRRRQRQLQAAAAAADATTNT 109
>TAIR|locus:2825767 [details] [associations]
symbol:WOX4 "WUSCHEL related homeobox 4" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEP] [GO:0010067 "procambium histogenesis"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0007165 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC083835 GO:GO:0010067 EMBL:AY251396 EMBL:BT010692
EMBL:BT010974 IPI:IPI00536109 PIR:F96511 RefSeq:NP_175145.2
UniGene:At.38691 ProteinModelPortal:Q6X7J9 SMR:Q6X7J9 IntAct:Q6X7J9
EnsemblPlants:AT1G46480.1 GeneID:841113 KEGG:ath:AT1G46480
GeneFarm:3104 TAIR:At1g46480 eggNOG:NOG268206 HOGENOM:HOG000272700
InParanoid:Q6X7J9 OMA:ENEYKRT PhylomeDB:Q6X7J9
ProtClustDB:CLSN2680403 Genevestigator:Q6X7J9 Uniprot:Q6X7J9
Length = 251
Score = 149 (57.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 149
Query: 84 Q 84
Q
Sbjct: 150 Q 150
>TAIR|locus:2049547 [details] [associations]
symbol:PFS2 "PRETTY FEW SEEDS 2" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009409 "response
to cold" evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048482 "ovule morphogenesis" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0016049 "cell
growth" evidence=IMP] [GO:0048314 "embryo sac morphogenesis"
evidence=IMP] [GO:0048353 "primary endosperm nucleus" evidence=IDA]
[GO:0048366 "leaf development" evidence=IMP] [GO:0048437 "floral
organ development" evidence=IMP] [GO:0048446 "petal morphogenesis"
evidence=RCA;IMP] [GO:0051301 "cell division" evidence=IMP]
[GO:0048445 "carpel morphogenesis" evidence=RCA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0030154 EMBL:CP002685 GO:GO:0051301
GO:GO:0016049 GO:GO:0043565 GO:GO:0048477 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
EMBL:AC005560 GO:GO:0048446 GO:GO:0048482 EMBL:AY251399
EMBL:AY885222 EMBL:AY085832 IPI:IPI00544402 PIR:E84425
RefSeq:NP_565263.1 UniGene:At.42485 ProteinModelPortal:Q9ZVF5
SMR:Q9ZVF5 STRING:Q9ZVF5 PRIDE:Q9ZVF5 EnsemblPlants:AT2G01500.1
GeneID:814678 KEGG:ath:AT2G01500 TAIR:At2g01500 eggNOG:NOG239725
OMA:CDINGND PhylomeDB:Q9ZVF5 ProtClustDB:CLSN2916958
Genevestigator:Q9ZVF5 GO:GO:0048353 GO:GO:0048314 Uniprot:Q9ZVF5
Length = 271
Score = 148 (57.2 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR- 79
A RW PTP Q+ LE +Y TP ++IQ + ++L K+G+I NV+ WFQN +AR
Sbjct: 58 ATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARE 117
Query: 80 -LKRKQ 84
LKR++
Sbjct: 118 RLKRRR 123
>TAIR|locus:2060902 [details] [associations]
symbol:WUS "AT2G17950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048653 "anther development" evidence=IMP] [GO:0080166 "stomium
development" evidence=IMP] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010093 "specification of floral organ identity"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0019827 "stem cell maintenance" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GO:GO:0043565 GO:GO:0048477 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010492 EMBL:AC006201
EMBL:AJ012310 EMBL:AY086385 IPI:IPI00522840 PIR:D84558 PIR:T00829
RefSeq:NP_565429.1 UniGene:At.51 ProteinModelPortal:Q9SB92
SMR:Q9SB92 IntAct:Q9SB92 STRING:Q9SB92 EnsemblPlants:AT2G17950.1
GeneID:816305 KEGG:ath:AT2G17950 GeneFarm:4830 TAIR:At2g17950
eggNOG:NOG286377 InParanoid:Q9SB92 OMA:GEDHING PhylomeDB:Q9SB92
ProtClustDB:CLSN2688215 Genevestigator:Q9SB92 GO:GO:0080166
Uniprot:Q9SB92
Length = 292
Score = 149 (57.5 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 14 SGSQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNV 69
SGS T RQ RWTPT Q++IL+ +Y + +P +IQ +TA L + G+I NV
Sbjct: 25 SGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNV 84
Query: 70 YNWFQNRRARLKRKQ--SGVVPNNAESEAETVTHAESRKQNP 109
+ WFQN +AR ++K+ +G S +V A + +P
Sbjct: 85 FYWFQNHKARERQKKRFNGTNMTTPSSSPNSVMMAANDHYHP 126
>TAIR|locus:2161353 [details] [associations]
symbol:WOX8 "AT5G45980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0048825 "cotyledon
development" evidence=IGI;IMP] [GO:0030010 "establishment of cell
polarity" evidence=IMP] [GO:0090451 "cotyledon boundary formation"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AB006698 GO:GO:0030010 GO:GO:0048825 GO:GO:0090451
EMBL:AY251400 IPI:IPI00530694 RefSeq:NP_199410.2 UniGene:At.23155
ProteinModelPortal:Q6X7J5 SMR:Q6X7J5 PRIDE:Q6X7J5
EnsemblPlants:AT5G45980.1 GeneID:834638 KEGG:ath:AT5G45980
TAIR:At5g45980 eggNOG:NOG319740 HOGENOM:HOG000154860 OMA:EIQRIRI
PhylomeDB:Q6X7J5 ProtClustDB:CLSN2680017 Genevestigator:Q6X7J5
GermOnline:AT5G45980 Uniprot:Q6X7J5
Length = 325
Score = 148 (57.2 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 82 RK 83
K
Sbjct: 113 HK 114
>TAIR|locus:2168504 [details] [associations]
symbol:WOX2 "WUSCHEL related homeobox 2" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0009942 "longitudinal axis specification"
evidence=IMP] [GO:0010654 "apical cell fate commitment"
evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0048825 "cotyledon development"
evidence=IGI;IMP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0090451 "cotyledon boundary formation" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0080167 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009942 GO:GO:0048825 EMBL:AB016890 EMBL:AY251392
EMBL:AY251393 IPI:IPI00526689 RefSeq:NP_200742.2 UniGene:At.49429
ProteinModelPortal:Q6X7K1 SMR:Q6X7K1 EnsemblPlants:AT5G59340.1
GeneID:836053 KEGG:ath:AT5G59340 TAIR:At5g59340 eggNOG:NOG294844
HOGENOM:HOG000090362 InParanoid:Q6X7K1 OMA:RAYGHIE PhylomeDB:Q6X7K1
ProtClustDB:CLSN2681679 Genevestigator:Q6X7K1 GermOnline:AT5G59340
GO:GO:0010654 GO:GO:0090451 Uniprot:Q6X7K1
Length = 260
Score = 145 (56.1 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE++Y E TP +IQ +T L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 84 Q 84
Q
Sbjct: 74 Q 74
>UNIPROTKB|Q33DK0 [details] [associations]
symbol:WOX1B "WUSCHEL-related homeobox 1B" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CM000141 EMBL:AB218894
ProteinModelPortal:Q33DK0 IntAct:Q33DK0 Gramene:Q33DK0
Uniprot:Q33DK0
Length = 289
Score = 139 (54.0 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 83 KQ 84
K+
Sbjct: 95 KK 96
>TAIR|locus:2175941 [details] [associations]
symbol:WOX12 "AT5G17810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB006706
EMBL:AY251403 EMBL:AK117910 EMBL:BT006232 IPI:IPI00524309
RefSeq:NP_001190327.1 RefSeq:NP_197283.2 UniGene:At.31506
ProteinModelPortal:Q8GY25 SMR:Q8GY25 IntAct:Q8GY25
EnsemblPlants:AT5G17810.1 EnsemblPlants:AT5G17810.2 GeneID:831649
KEGG:ath:AT5G17810 TAIR:At5g17810 eggNOG:NOG256790
HOGENOM:HOG000064623 InParanoid:Q8GY25 OMA:NNGMENL PhylomeDB:Q8GY25
ProtClustDB:CLSN2680059 Genevestigator:Q8GY25 Uniprot:Q8GY25
Length = 268
Score = 135 (52.6 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R RW+P P Q+ ILE +++ P K + + L K G + + NV+ WFQNRR+R +
Sbjct: 19 RARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRRSRSR 78
Query: 82 RKQSGVVPNNAESEAETVTHAESRK 106
R+ ++ A + A T AE +
Sbjct: 79 RRHRQLLA--ATTAAATSIGAEDHQ 101
>TAIR|locus:2074638 [details] [associations]
symbol:WOX5 "WUSCHEL related homeobox 5" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC073395 EMBL:AY251398 EMBL:AY150812
IPI:IPI00524533 RefSeq:NP_187735.2 UniGene:At.39787
ProteinModelPortal:Q8H1D2 SMR:Q8H1D2 STRING:Q8H1D2
EnsemblPlants:AT3G11260.1 GeneID:820297 KEGG:ath:AT3G11260
TAIR:At3g11260 eggNOG:NOG241769 HOGENOM:HOG000238479
InParanoid:Q8H1D2 OMA:TGTKCGR PhylomeDB:Q8H1D2
ProtClustDB:CLSN2690857 Genevestigator:Q8H1D2 Uniprot:Q8H1D2
Length = 182
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT QL+IL ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 84 Q 84
+
Sbjct: 84 R 84
>TAIR|locus:2166434 [details] [associations]
symbol:WOX7 "AT5G05770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB005237
eggNOG:NOG241769 EMBL:AB493739 IPI:IPI00518458 RefSeq:NP_196196.1
UniGene:At.54734 ProteinModelPortal:Q9FFK0 SMR:Q9FFK0
EnsemblPlants:AT5G05770.1 GeneID:830462 KEGG:ath:AT5G05770
TAIR:At5g05770 InParanoid:Q9FFK0 PhylomeDB:Q9FFK0
Genevestigator:Q9FFK0 Uniprot:Q9FFK0
Length = 122
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQK 88
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 42/124 (33%), Positives = 63/124 (50%)
Query: 4 GNPYFD-PFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMT--AELAK 60
G P + P SG+ K + R+R T QL LE + CK K +T +++A
Sbjct: 8 GGPAAEQPPPGSGAGK-SRRRRTAFTSEQLLELEKEF-HCK------KYLSLTERSQIAH 59
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
++SE V WFQNRRA+ KR ++G V N + E V + + + +P + QSL + P
Sbjct: 60 ALKLSEVQVKIWFQNRRAKWKRIKAGNVSNRS---GEPVRNPKIVRAHPGARQSLRRAQP 116
Query: 121 PPRD 124
P D
Sbjct: 117 APAD 120
>TAIR|locus:2161388 [details] [associations]
symbol:AT5G46010 species:3702 "Arabidopsis thaliana"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0043565 GO:GO:0003700 SUPFAM:SSF46689 EMBL:AB006698
IPI:IPI00544220 RefSeq:NP_199413.1 UniGene:At.55398
ProteinModelPortal:Q9FNM1 SMR:Q9FNM1 EnsemblPlants:AT5G46010.1
GeneID:834641 KEGG:ath:AT5G46010 TAIR:At5g46010 InParanoid:Q9FNM1
PhylomeDB:Q9FNM1 Genevestigator:Q9FNM1 Uniprot:Q9FNM1
Length = 122
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ-ISETNVYNWFQNRRARL 80
+ W P Q QILE ++ P I+ +T +L +G+ + + +VY WF NR+
Sbjct: 52 KPEWKPNQHQAQILEELFIGGTVNPSLTSIKQITIKLQSYGEEVDDADVYKWFHNRKYSR 111
Query: 81 KRK 83
K K
Sbjct: 112 KPK 114
>RGD|1308265 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA;ISO] [GO:0008344
"adult locomotory behavior" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048589 "developmental growth" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308265 GO:GO:0007420
GO:GO:0043565 GO:GO:0008344 GO:GO:0008343 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0048589 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 OrthoDB:EOG4BCDNN IPI:IPI00764573
Ensembl:ENSRNOT00000057055 UCSC:RGD:1308265 Uniprot:D3ZMA3
Length = 381
Score = 113 (44.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/134 (26%), Positives = 54/134 (40%)
Query: 15 GSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GSQ + R R T QL+ LE + + T + M LA + E V WF
Sbjct: 65 GSQHRKQRRSRTAFTAQQLEALEKTFQK---THYPDVV--MRERLAMCTNLPEARVQVWF 119
Query: 74 QNRRARLKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPPPRDEDIYPQSP 132
+NRRA+ ++KQ + + + E +H E + + P S LE PP P
Sbjct: 120 KNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKMETPASNTQLEAEQPPSLPSGDPPAEL 179
Query: 133 DLGIDQMIGKMEIP 146
L + + P
Sbjct: 180 QLSLSEQSASESAP 193
>UNIPROTKB|E1BF87 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0042474 "middle ear
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 OMA:GVSMANS EMBL:DAAA02032213 EMBL:DAAA02032214
EMBL:DAAA02032215 IPI:IPI00713783 Ensembl:ENSBTAT00000003817
Uniprot:E1BF87
Length = 166
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
A+ +K R R T +QLQ LE V++ T + ELA+ +SE V W
Sbjct: 10 AAKRKKKQRRNRTTFNSSQLQALERVFER---THYPDAF--VREELARRVNLSEARVQVW 64
Query: 73 FQNRRARLKRKQSGVVPNNAES 94
FQNRRA+ +R + ++ N + S
Sbjct: 65 FQNRRAKFRRNERAMLANRSAS 86
>UNIPROTKB|F1PL78 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
EMBL:AAEX03009771 Ensembl:ENSCAFT00000006786 Uniprot:F1PL78
Length = 379
Score = 110 (43.8 bits), Expect = 0.00013, P = 0.00013
Identities = 36/134 (26%), Positives = 54/134 (40%)
Query: 15 GSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GSQ + R R T QL+ LE + + T + M LA + E V WF
Sbjct: 66 GSQHRKQRRSRTAFTAQQLEALEKTFQK---THYPDVV--MRERLAMCTNLPEARVQVWF 120
Query: 74 QNRRARLKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPPPRDEDIYPQSP 132
+NRRA+ ++KQ + + + E +H ES+ + P LE PP P
Sbjct: 121 KNRRAKFRKKQRSLQKEQLQKQKEAEGSHGESKPEAPTPDTQLETEQPPSLPSGDPPADL 180
Query: 133 DLGIDQMIGKMEIP 146
L + + P
Sbjct: 181 HLSLSEQSASESAP 194
>MGI|MGI:2153518 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IGI;IMP] [GO:0008344
"adult locomotory behavior" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:2153518 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0048589
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 HSSP:P06601 CTD:127343
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OMA:PDTQLDT EMBL:AF448118 EMBL:AF499446 EMBL:AB037698 EMBL:AF421857
EMBL:AF421858 EMBL:AF463513 EMBL:AL627105 EMBL:BC050912
EMBL:AF461039 IPI:IPI00407603 IPI:IPI00752762 RefSeq:NP_001020738.1
RefSeq:NP_570935.3 UniGene:Mm.213206 UniGene:Mm.413175
ProteinModelPortal:Q91ZK4 SMR:Q91ZK4 MINT:MINT-1347271
STRING:Q91ZK4 PhosphoSite:Q91ZK4 PRIDE:Q91ZK4
Ensembl:ENSMUST00000064806 Ensembl:ENSMUST00000084338
Ensembl:ENSMUST00000124071 GeneID:140477 KEGG:mmu:140477
UCSC:uc008ufr.1 InParanoid:B1ASG1 OrthoDB:EOG4BCDNN NextBio:369772
Bgee:Q91ZK4 CleanEx:MM_DMBX1 Genevestigator:Q91ZK4
GermOnline:ENSMUSG00000028707 Uniprot:Q91ZK4
Length = 381
Score = 110 (43.8 bits), Expect = 0.00014, P = 0.00014
Identities = 36/134 (26%), Positives = 54/134 (40%)
Query: 15 GSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GSQ + R R T QL+ LE + + T + M LA + E V WF
Sbjct: 65 GSQHRKQRRSRTAFTAQQLEALEKTFQK---THYPDVV--MRERLAMCTNLPEARVQVWF 119
Query: 74 QNRRARLKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPPPRDEDIYPQSP 132
+NRRA+ ++KQ + + + E +H E + + P S LE PP P
Sbjct: 120 KNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPPGLPSGDPPAEL 179
Query: 133 DLGIDQMIGKMEIP 146
L + + P
Sbjct: 180 QLSLSEQSASESAP 193
>UNIPROTKB|J9NS81 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:AAEX03009771 Ensembl:ENSCAFT00000047515
Uniprot:J9NS81
Length = 414
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 36/134 (26%), Positives = 54/134 (40%)
Query: 15 GSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GSQ + R R T QL+ LE + + T + M LA + E V WF
Sbjct: 101 GSQHRKQRRSRTAFTAQQLEALEKTFQK---THYPDVV--MRERLAMCTNLPEARVQVWF 155
Query: 74 QNRRARLKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPPPRDEDIYPQSP 132
+NRRA+ ++KQ + + + E +H ES+ + P LE PP P
Sbjct: 156 KNRRAKFRKKQRSLQKEQLQKQKEAEGSHGESKPEAPTPDTQLETEQPPSLPSGDPPADL 215
Query: 133 DLGIDQMIGKMEIP 146
L + + P
Sbjct: 216 HLSLSEQSASESAP 229
>UNIPROTKB|F1RQG1 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:GVSMANS EMBL:CU915659 Ensembl:ENSSSCT00000006245 Uniprot:F1RQG1
Length = 211
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 42/154 (27%), Positives = 68/154 (44%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
A+ +K R R T +QLQ LE V++ T + ELA+ +SE V W
Sbjct: 55 AAKRKKKQRRNRTTFNSSQLQALERVFER---THYPDAF--VREELARRVNLSEARVQVW 109
Query: 73 FQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQ----NPESIQ----SLEDSAP---- 120
FQNRRA+ +R + ++ N + S ++ + + +Q P ++ S SAP
Sbjct: 110 FQNRRAKFRRNERAMLANRSASLLKSYSQEAAIEQPVAPRPTTLSPDYLSWTASAPYSTV 169
Query: 121 PPRDED-IYPQSPDLGIDQMIGKMEIPGS-FSFH 152
PP P +P + + I + + FS H
Sbjct: 170 PPYSPGGSGPATPGVNMANSIASLRLKAKEFSLH 203
>UNIPROTKB|F1PF43 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 OMA:LGEADHC
EMBL:AAEX03007653 EMBL:AAEX03007652 Ensembl:ENSCAFT00000005524
Uniprot:F1PF43
Length = 247
Score = 99 (39.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 61 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 115
Query: 82 RKQSGVVPNNAESEA 96
+ QS + SEA
Sbjct: 116 KDQSRDLEKRTSSEA 130
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 108 NPESIQSLEDSAPPPRDEDIYPQSPDLGI 136
NP + S PPP +P +P L +
Sbjct: 187 NPLTSASASPPLPPPPPTLCFPSAPLLDL 215
>UNIPROTKB|F1NL46 [details] [associations]
symbol:MIXL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 IPI:IPI00572899
EMBL:AADN02012178 EMBL:AADN02012179 Ensembl:ENSGALT00000038806
OMA:AFPAGRW ArrayExpress:F1NL46 Uniprot:F1NL46
Length = 122
Score = 91 (37.1 bits), Expect = 0.00019, P = 0.00019
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 10 PFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNV 69
P A G+ R+R + T AQL+ LE V+ + P I + LA QI E+ +
Sbjct: 48 PPAAEGAPSAQRRKRTSFTAAQLETLELVFQDTM-YP---DIY-LRERLADATQIPESRI 102
Query: 70 YNWFQNRRARLKRKQSG 86
WFQNRRA+ R+Q G
Sbjct: 103 QVWFQNRRAK-SRRQRG 118
>UNIPROTKB|F1NZI9 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 IPI:IPI00579776 OMA:GVSMANS EMBL:AADN02026599
Ensembl:ENSGALT00000006733 Uniprot:F1NZI9
Length = 165
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
+K R R T +QLQ LE V++ T + ELA+ +SE V WFQNR
Sbjct: 13 KKKQRRNRTTFNSSQLQALERVFER---THYPDAF--VREELARRVNLSEARVQVWFQNR 67
Query: 77 RARLKRKQSGVVPNNAES 94
RA+ +R + ++ N + S
Sbjct: 68 RAKFRRNERAMLANRSAS 85
>UNIPROTKB|Q90963 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 EMBL:X79695
IPI:IPI00579776 PIR:S49440 UniGene:Gga.53985
ProteinModelPortal:Q90963 SMR:Q90963 STRING:Q90963 eggNOG:NOG309174
InParanoid:Q90963 Uniprot:Q90963
Length = 165
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
+K R R T +QLQ LE V++ T + ELA+ +SE V WFQNR
Sbjct: 13 KKKQRRNRTTFNSSQLQALERVFER---THYPDAF--VREELARRVNLSEARVQVWFQNR 67
Query: 77 RARLKRKQSGVVPNNAES 94
RA+ +R + ++ N + S
Sbjct: 68 RAKFRRNERAMLANRSAS 85
>UNIPROTKB|F8VU08 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0002573 "myeloid leukocyte differentiation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0030177 "positive regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030948
"negative regulation of vascular endothelial growth factor receptor
signaling pathway" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
GO:GO:0005634 GO:GO:0005737 GO:GO:0007165 GO:GO:0009611
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0030183 GO:GO:0035264 GO:GO:0001570
GO:GO:0016525 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0030878 EMBL:AL590080
GO:GO:0048853 GO:GO:0061009 HGNC:HGNC:4901 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431
IPI:IPI01021632 SMR:F8VU08 Ensembl:ENST00000472590
Ensembl:ENST00000492654 Uniprot:F8VU08
Length = 98
Score = 87 (35.7 bits), Expect = 0.00059, P = 0.00059
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 63 QISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQ----SLEDS 118
Q+SE V WFQNRRA+ +R + +N + E E++ + ++Q+ S Q SL+ S
Sbjct: 3 QLSERQVKTWFQNRRAKWRRLKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSS 62
Query: 119 --APPPRDEDIYPQSPDLGIDQMIGKMEIPGSFSF 151
+P P ++ DQ +++I G S+
Sbjct: 63 QCSPSPASQEDLESEISEDSDQ---EVDIEGDKSY 94
>UNIPROTKB|H0YIZ3 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 EMBL:AL590369 HGNC:HGNC:21338
ChiTaRS:PRRX2 Ensembl:ENST00000557730 Uniprot:H0YIZ3
Length = 166
Score = 99 (39.9 bits), Expect = 0.00060, P = 0.00060
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
A+ +K R R T +QLQ LE V++ T + ELA+ +SE V W
Sbjct: 12 AAKRKKKQRRNRTTFNSSQLQALERVFER---THYPDAF--VREELARRVNLSEARVQVW 66
Query: 73 FQNRRARLKRKQSGVVPNNAES 94
FQNRRA+ +R + ++ + + S
Sbjct: 67 FQNRRAKFRRNERAMLASRSAS 88
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 99 (39.9 bits), Expect = 0.00060, P = 0.00060
Identities = 38/113 (33%), Positives = 55/113 (48%)
Query: 10 PFVASGSQKLTARQ-RWTPTPAQLQILEHVYDECKG-TPRKQKIQDMTAELAKHGQISET 67
P+++ QK Q R+T Q LEH +D K +P+++K +LAK +SE
Sbjct: 67 PYMSKSPQKRKGGQIRFTNE--QTDALEHKFDSHKYLSPQERK------KLAKSLSLSER 118
Query: 68 NVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
V WFQNRRA+ +R V + E E E A +R S+ L+ S P
Sbjct: 119 QVKTWFQNRRAKWRR-----VRKDGEDEDEMPNGASAR-----SLGQLQSSNP 161
>UNIPROTKB|F1MR77 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048589 "developmental growth" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008343
"adult feeding behavior" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:DAAA02008995 IPI:IPI00700903 UniGene:Bt.106532
Ensembl:ENSBTAT00000012679 NextBio:20878789 Uniprot:F1MR77
Length = 379
Score = 105 (42.0 bits), Expect = 0.00074, P = 0.00074
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 15 GSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GSQ + R R T QL+ LE + + T + M LA + E V WF
Sbjct: 65 GSQHRKQRRSRTAFTAQQLEALEKTFQK---THYPDVV--MRERLAMCTNLPEARVQVWF 119
Query: 74 QNRRARLKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPP 121
+NRRA+ ++KQ + + + E +H E + + P LE PP
Sbjct: 120 KNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKTEAPTPDTQLETDQPP 168
>UNIPROTKB|F1S3W3 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048589 "developmental growth" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008343
"adult feeding behavior" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:FP101978 Ensembl:ENSSSCT00000004315 Uniprot:F1S3W3
Length = 385
Score = 105 (42.0 bits), Expect = 0.00076, P = 0.00076
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 15 GSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GSQ + R R T QL+ LE + + T + M LA + E V WF
Sbjct: 66 GSQHRKQRRSRTAFTAQQLEALEKTFQK---THYPDVV--MRERLAMCTNLPEARVQVWF 120
Query: 74 QNRRARLKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPP 121
+NRRA+ ++KQ + + + E +H E + + P LE PP
Sbjct: 121 KNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKTEAPPPDTQLETEQPP 169
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 103 (41.3 bits), Expect = 0.00078, P = 0.00078
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHA-ESRK-----QNPES 111
LAK Q+SE V WFQNRRA+ +R + NN + E E++ ++ + R+ QN +
Sbjct: 172 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPQNNKKEELESLDNSCDQRQDLPSDQNTGA 231
Query: 112 IQSLEDSAPPPRDEDI 127
++S + S P ED+
Sbjct: 232 LESSQCSPSPVSQEDL 247
>UNIPROTKB|Q9UIW0 [details] [associations]
symbol:VAX2 "Ventral anterior homeobox 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
Length = 290
Score = 98 (39.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQSGVVPNNAESEA 96
+ QS + A S A
Sbjct: 159 KDQSRDLEKRASSSA 173
Score = 37 (18.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 104 SRKQNPESIQSLEDSAPPPRDEDIYPQSPDLGI 136
S + NP S S PPP + +P L +
Sbjct: 226 SPRLNPLSSASASPPLPPPLPAVCFSSAPLLDL 258
>ZFIN|ZDB-GENE-000223-14 [details] [associations]
symbol:phox2a "paired-like homeobox 2a" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007420 "brain development" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000223-14 GO:GO:0005634
GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104256 EMBL:CU633849
IPI:IPI00511129 Ensembl:ENSDART00000002384 Bgee:F1RCT9
Uniprot:F1RCT9
Length = 280
Score = 103 (41.3 bits), Expect = 0.00083, P = 0.00083
Identities = 43/140 (30%), Positives = 62/140 (44%)
Query: 13 ASG-SQKLTARQ-RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
ASG ++K R+ R T T +QL+ LE V+ E + ELA ++E V
Sbjct: 83 ASGLNEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTR-----EELALKIDLTEARVQ 137
Query: 71 NWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQ 130
WFQNRRA+ RKQ + A S + +++R + E +S E + P D
Sbjct: 138 VWFQNRRAKF-RKQERAANSKASSSSGGKKPSDARSSS-EDDESKESTCSPTPDSTANMS 195
Query: 131 SPDLGIDQMIGKMEIPGSFS 150
SP G + PG S
Sbjct: 196 SP--GARSSLSPSPAPGPAS 213
>RGD|621133 [details] [associations]
symbol:Vax2 "ventral anterior homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA;ISO] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA;ISO] [GO:0016055
"Wnt receptor signaling pathway" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA;ISO;ISS] [GO:0031490
"chromatin DNA binding" evidence=IEA;ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0048048 "embryonic eye
morphogenesis" evidence=IEA;ISO] [GO:0060041 "retina development in
camera-type eye" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621133 GO:GO:0005634 GO:GO:0005737 GO:GO:0016055
GO:GO:0030900 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060041 GO:GO:0007409 GO:GO:0048048 GO:GO:0000976
GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:AF113516 IPI:IPI00204233 RefSeq:NP_072159.1 UniGene:Rn.48765
ProteinModelPortal:Q9JLZ9 GeneID:64572 KEGG:rno:64572
UCSC:RGD:621133 InParanoid:Q9JLZ9 NextBio:613528
Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261 Uniprot:Q9JLZ9
Length = 292
Score = 98 (39.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQSGVVPNNAESEA 96
+ QS + A S A
Sbjct: 159 KDQSRDLEKRASSSA 173
Score = 37 (18.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 104 SRKQNPESIQSLEDSAPPPRDEDIYPQSP--DLGIDQMIG 141
S++ NP S PPP + +P DL +G
Sbjct: 226 SQRLNPMPSASASSPLPPPLPAVCFSAAPLLDLPASYKLG 265
>UNIPROTKB|Q9JLZ9 [details] [associations]
symbol:Vax2 "Ventral anterior homeobox 2" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:621133 GO:GO:0005634
GO:GO:0005737 GO:GO:0016055 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0031490 GO:GO:0009950
eggNOG:NOG309408 HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318
OrthoDB:EOG4QVCD6 CTD:25806 EMBL:AF113516 IPI:IPI00204233
RefSeq:NP_072159.1 UniGene:Rn.48765 ProteinModelPortal:Q9JLZ9
GeneID:64572 KEGG:rno:64572 UCSC:RGD:621133 InParanoid:Q9JLZ9
NextBio:613528 Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261
Uniprot:Q9JLZ9
Length = 292
Score = 98 (39.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQSGVVPNNAESEA 96
+ QS + A S A
Sbjct: 159 KDQSRDLEKRASSSA 173
Score = 37 (18.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 104 SRKQNPESIQSLEDSAPPPRDEDIYPQSP--DLGIDQMIG 141
S++ NP S PPP + +P DL +G
Sbjct: 226 SQRLNPMPSASASSPLPPPLPAVCFSAAPLLDLPASYKLG 265
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 162 162 0.00079 107 3 11 23 0.42 32
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 594 (63 KB)
Total size of DFA: 163 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.23u 0.12s 21.35t Elapsed: 00:00:01
Total cpu time: 21.23u 0.12s 21.35t Elapsed: 00:00:01
Start: Fri May 10 21:06:00 2013 End: Fri May 10 21:06:01 2013