BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031304
(162 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224083324|ref|XP_002306983.1| predicted protein [Populus trichocarpa]
gi|222856432|gb|EEE93979.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 123/164 (75%), Gaps = 4/164 (2%)
Query: 1 MRMGNPYF-DPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELA 59
MR+GNPYF DP ++S K+ +RQRWTP PAQL+ILE ++ +C TP +QKI+D+T ELA
Sbjct: 55 MRLGNPYFCDPLLSSSVHKIGSRQRWTPKPAQLEILEQIFKQCNATPGRQKIKDITKELA 114
Query: 60 KHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDS 118
+HGQISETNVYNWFQNRRAR KRKQS ++PN+ ESE ET + + +K PE Q ED+
Sbjct: 115 QHGQISETNVYNWFQNRRARSKRKQSALLPNSGESEVETEIEPFKEKKTKPEDNQPDEDA 174
Query: 119 APPPRDEDIYPQSPDLGIDQMIGKMEIPGSFSFHWQVDRYDMLG 162
P + +Y SPD+GIDQ++GKME PGS +WQ+++YD+ G
Sbjct: 175 T--PVSDHMYLHSPDIGIDQLVGKMESPGSCIPYWQLEQYDLFG 216
>gi|224065679|ref|XP_002301917.1| predicted protein [Populus trichocarpa]
gi|222843643|gb|EEE81190.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 120/163 (73%), Gaps = 3/163 (1%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
M +GNPY DP ++S K+ +RQRWTP PAQLQILE ++++C TP +QKI+D+T ELA+
Sbjct: 55 MGLGNPYCDPLLSSAVHKIGSRQRWTPKPAQLQILEQIFEQCNATPGRQKIKDITRELAQ 114
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KRKQS VVPNN ESE ET + + +K E Q E++
Sbjct: 115 HGQISETNVYNWFQNRRARSKRKQSAVVPNNGESEMETDIESLKEKKTRAEDSQPDENTT 174
Query: 120 PPPRDEDIYPQSPDLGIDQMIGKMEIPGSFSFHWQVDRYDMLG 162
P + +Y SPD+G DQ++GK+E PGS +WQ+++YD+ G
Sbjct: 175 PMA--DHMYFNSPDIGFDQLMGKIESPGSCIPYWQMEQYDLFG 215
>gi|40233067|gb|AAR83340.1| homeodomain protein HB1 [Populus tomentosa]
gi|40233103|gb|AAR83342.1| homeodomain protein HB1 [Populus tomentosa]
Length = 217
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 120/165 (72%), Gaps = 5/165 (3%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
M +GNPY DP ++S K+ +RQRWTP PAQLQILE ++++C TP +QKI+D+T ELA+
Sbjct: 55 MGLGNPYCDPLLSSAVHKIGSRQRWTPKPAQLQILEQIFEQCNATPGRQKIKDITRELAQ 114
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KRKQS VVPNN ESE ET + + +K E Q E++
Sbjct: 115 HGQISETNVYNWFQNRRARSKRKQSAVVPNNGESEMETDIESLKEKKTRAEDSQPDENTT 174
Query: 120 PPPRDEDIYPQSPDLGIDQMIGKMEIPGSFSF--HWQVDRYDMLG 162
P + +Y SPD+G DQ++GK+E PG S +WQ+++YD+ G
Sbjct: 175 --PMADHMYFNSPDIGFDQLMGKIESPGPGSCIPYWQMEQYDLFG 217
>gi|3955019|emb|CAA09366.1| HB1 homeodomain protein [Populus tremula x Populus tremuloides]
Length = 217
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 120/165 (72%), Gaps = 5/165 (3%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
M +GNPY DP ++S K+ +RQRWTP PAQLQILE ++++C TP +QKI+D+T ELA+
Sbjct: 55 MGLGNPYCDPLLSSAVHKIGSRQRWTPKPAQLQILEQIFEQCNATPGRQKIKDITRELAQ 114
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KRKQS VVPNN ESE ET + + +K E Q E++
Sbjct: 115 HGQISETNVYNWFQNRRARSKRKQSAVVPNNGESEMETDIESLKEKKTRAEDSQPDENTT 174
Query: 120 PPPRDEDIYPQSPDLGIDQMIGKMEIPGSFSF--HWQVDRYDMLG 162
P + +Y SPD+G DQ++GK+E PG S +WQ+++YD+ G
Sbjct: 175 --PMADHMYFNSPDIGFDQLMGKIESPGPGSCIPYWQMEQYDLFG 217
>gi|224081491|ref|XP_002306432.1| predicted protein [Populus trichocarpa]
gi|222855881|gb|EEE93428.1| predicted protein [Populus trichocarpa]
Length = 248
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 118/168 (70%), Gaps = 10/168 (5%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
R+GN Y DP +ASG K+TARQRWTPTP QLQILE ++D+ GTP KQKI+++T+EL++H
Sbjct: 84 RLGNLYCDPLMASGGHKITARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQH 143
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
GQISETNVYNWFQNRRAR KRKQ NNAESE ET + + K+ PE + ++ P
Sbjct: 144 GQISETNVYNWFQNRRARSKRKQLVASSNNAESEVETEVDSLNEKKKPEIFHAQQN---P 200
Query: 122 PRDEDIYPQSPD-------LGIDQMIGKMEIPGSFSFHWQVDRYDMLG 162
PR ED+ QSP+ LG D + GKM +PG+++ + Q + Y M G
Sbjct: 201 PRAEDLCFQSPEISSELHFLGDDHLTGKMGVPGNYNLYDQAEDYGMAG 248
>gi|40233087|gb|AAR83341.1| homeodomain protein HB2 [Populus tomentosa]
Length = 257
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 117/168 (69%), Gaps = 10/168 (5%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
R+GN Y DP +ASG K+TARQRWTPTP QLQILE ++D+ GTP KQKI+++T+EL++H
Sbjct: 93 RLGNLYCDPLMASGGHKITARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQH 152
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
GQISETNVYNWFQNRRAR KRKQ NNAESE ET + + K+ PE + ++ P
Sbjct: 153 GQISETNVYNWFQNRRARSKRKQLVASSNNAESEVETEVDSLNEKKKPEIFHAQQN---P 209
Query: 122 PRDEDIYPQSPD-------LGIDQMIGKMEIPGSFSFHWQVDRYDMLG 162
PR ED+ Q P+ LG D + GKM +PG+++ + Q + Y M G
Sbjct: 210 PRAEDLCFQGPEISSELHFLGDDHLTGKMGVPGNYNLYDQAEDYGMAG 257
>gi|3955021|emb|CAA09367.1| HB2 homeodomain protein [Populus tremula x Populus tremuloides]
Length = 261
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 118/168 (70%), Gaps = 10/168 (5%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
R+GN Y DP +ASG K+TARQRWTPTP QLQILE ++D+ GTP KQKI+++T+EL++H
Sbjct: 97 RLGNLYCDPLMASGGHKITARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQH 156
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
GQISETNVYNWFQNRRAR KRKQ NNAESE ET + + K+ PE + ++ P
Sbjct: 157 GQISETNVYNWFQNRRARSKRKQLVASSNNAESEVETEVDSLNEKKKPEIFHAQQN---P 213
Query: 122 PRDEDIYPQSPD-------LGIDQMIGKMEIPGSFSFHWQVDRYDMLG 162
PR ED+ QSP+ LG D + GK+ +PG+++ + Q + Y M G
Sbjct: 214 PRAEDLCFQSPEISSELHFLGDDHLTGKVGVPGNYNLYDQAEDYGMAG 261
>gi|356508610|ref|XP_003523048.1| PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max]
Length = 208
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 111/153 (72%), Gaps = 2/153 (1%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP +A K+TARQRWTPTP QLQILE ++DE GTP KQKI+D+T EL +
Sbjct: 57 LRLGNLYCDPLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKDITIELGQ 116
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
HGQISETNVYNWFQNRRAR KRKQ PN E E E+ ++R + + +Q E+S+
Sbjct: 117 HGQISETNVYNWFQNRRARSKRKQLTPAPNVVEPEVESPKEKKTRAEGFQ-VQPYENSS- 174
Query: 121 PPRDEDIYPQSPDLGIDQMIGKMEIPGSFSFHW 153
P R +D+Y QSPD+G DQ++GK+E+ +S ++
Sbjct: 175 PHRIKDMYIQSPDIGFDQLLGKIEVASCYSSYF 207
>gi|147865345|emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]
Length = 243
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 128/207 (61%), Gaps = 47/207 (22%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y DP +AS K+++RQRWTPTP QLQILE ++D+ GTP KQKI+++T EL +
Sbjct: 39 MRLGNIYCDPLMASAGHKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQ 98
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KRKQS +PNNA+SE ET V + +K P++IQS E+SA
Sbjct: 99 HGQISETNVYNWFQNRRARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSA 158
Query: 120 PPPRDEDIYPQSPDLG-------------------------------------------I 136
E+IY QSP++G +
Sbjct: 159 --LGTENIYFQSPEMGSEMHCLDTQPNKGEPMFPSDHSLRSSGSLGHSSLYEAGVPNPRM 216
Query: 137 DQMIGKMEIPGSFSFHWQ-VDRYDMLG 162
DQ+IGK+E+PGSFS + Q + +DM+G
Sbjct: 217 DQLIGKVEVPGSFSPYRQGGEGFDMVG 243
>gi|225457574|ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis vinifera]
gi|297745565|emb|CBI40730.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 128/207 (61%), Gaps = 47/207 (22%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y DP +AS K+++RQRWTPTP QLQILE ++D+ GTP KQKI+++T EL +
Sbjct: 75 MRLGNIYCDPLMASAGHKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQ 134
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KRKQS +PNNA+SE ET V + +K P++IQS E+SA
Sbjct: 135 HGQISETNVYNWFQNRRARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSA 194
Query: 120 PPPRDEDIYPQSPDLG-------------------------------------------I 136
E+IY QSP++G +
Sbjct: 195 --LGTENIYFQSPEMGSEMHCLDTQPNKGEPMFPSDRSLRSSGSLGHSSLYETGVPNPRM 252
Query: 137 DQMIGKMEIPGSFSFHWQ-VDRYDMLG 162
DQ+IGK+E+PGSFS + Q + +DM+G
Sbjct: 253 DQLIGKVEVPGSFSPYRQGGEGFDMVG 279
>gi|296088650|emb|CBI37641.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 118/200 (59%), Gaps = 40/200 (20%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+++T++L++
Sbjct: 42 VRLGNLYCDPLMTSTGHKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQ 101
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KRKQ PNNA+SE ET V + +K E+ ++SA
Sbjct: 102 HGQISETNVYNWFQNRRARSKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSA 161
Query: 120 PPPRDEDIYPQSPDLGI-------------------------------------DQMIGK 142
P ED+ Q+P+LG D IGK
Sbjct: 162 SRP--EDLCFQNPELGSRLDFLDQQTHKEEAIFPSDGGIKPSGNLSPVAFYAGNDHQIGK 219
Query: 143 MEIPGSFSFHWQVDRYDMLG 162
ME+PGS++ + Q + Y M G
Sbjct: 220 MEVPGSYNPYQQTEDYSMSG 239
>gi|225431417|ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like isoform 1 [Vitis
vinifera]
Length = 281
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 118/200 (59%), Gaps = 40/200 (20%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+++T++L++
Sbjct: 84 VRLGNLYCDPLMTSTGHKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQ 143
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KRKQ PNNA+SE ET V + +K E+ ++SA
Sbjct: 144 HGQISETNVYNWFQNRRARSKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSA 203
Query: 120 PPPRDEDIYPQSPDLGI-------------------------------------DQMIGK 142
P ED+ Q+P+LG D IGK
Sbjct: 204 SRP--EDLCFQNPELGSRLDFLDQQTHKEEAIFPSDGGIKPSGNLSPVAFYAGNDHQIGK 261
Query: 143 MEIPGSFSFHWQVDRYDMLG 162
ME+PGS++ + Q + Y M G
Sbjct: 262 MEVPGSYNPYQQTEDYSMSG 281
>gi|255561425|ref|XP_002521723.1| DNA binding protein, putative [Ricinus communis]
gi|223539114|gb|EEF40710.1| DNA binding protein, putative [Ricinus communis]
Length = 247
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 111/168 (66%), Gaps = 11/168 (6%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
R+GN Y DP + SG K+TARQRWTPTP QLQ+LE ++D+ GTP KQKI+++T+EL++H
Sbjct: 84 RLGNLYCDPLMTSGGHKITARQRWTPTPVQLQVLERIFDQGNGTPSKQKIKEITSELSQH 143
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAP 120
GQISETNVYNWFQNRRAR KRKQ V +N ESE ET V K PE S ++
Sbjct: 144 GQISETNVYNWFQNRRARSKRKQL-VASSNTESEVETEVDSLNENKTKPEIFHSQQNH-- 200
Query: 121 PPRDEDIYPQSPDLGID-QMIGKM-----EIPGSFSFHWQVDRYDMLG 162
PR ED+ QSP++ + +G + PGS++ + Q + Y M G
Sbjct: 201 -PRAEDLCFQSPEISSELHFLGVLPNQRDGAPGSYNLYDQAEDYGMAG 247
>gi|449455611|ref|XP_004145546.1| PREDICTED: WUSCHEL-related homeobox 13-like [Cucumis sativus]
gi|449519581|ref|XP_004166813.1| PREDICTED: WUSCHEL-related homeobox 13-like [Cucumis sativus]
Length = 269
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 100/139 (71%), Gaps = 4/139 (2%)
Query: 1 MRMGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELA 59
MR+GN Y DP +AS + K+TARQRWTPTP QLQILE ++DE GTP KQKI+D+T +L
Sbjct: 74 MRLGNLYCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKDITLQLT 133
Query: 60 KHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDS 118
+HGQISE NVYNWFQNRRAR KRKQ+ +PNNA+SE ET V + +K PE+ Q+ E
Sbjct: 134 QHGQISEANVYNWFQNRRARSKRKQANSLPNNADSEPETEVDSPKEKKTKPEAFQTYEHL 193
Query: 119 APPPRDEDIYPQSPDLGID 137
P+ ++Y Q DL +
Sbjct: 194 V--PKSGNMYSQRTDLSTE 210
>gi|296088649|emb|CBI37640.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 116/198 (58%), Gaps = 36/198 (18%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + S K++ARQRWTPTP QLQILE ++D+ GTP KQKI+++T++L++
Sbjct: 39 VRLGNLYCDPLMTSTGHKISARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQ 98
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRA+ KRKQ +PNNAESE T V + +K E+ ++SA
Sbjct: 99 HGQISETNVYNWFQNRRAQSKRKQLITMPNNAESEVATEVESPKDQKTKSENFLPQQNSA 158
Query: 120 PPPRD----------------------EDIYPQSPDL-------------GIDQMIGKME 144
P D E+I+P + G D IGKME
Sbjct: 159 SRPEDLCFQNPEIGSRLHFLDQQTHKEENIFPSDGGIKPSGNPSQVAFYAGNDHQIGKME 218
Query: 145 IPGSFSFHWQVDRYDMLG 162
+PGS++ + + Y M G
Sbjct: 219 VPGSYNPYQHTEDYSMTG 236
>gi|225431415|ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like [Vitis vinifera]
Length = 276
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 116/198 (58%), Gaps = 36/198 (18%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + S K++ARQRWTPTP QLQILE ++D+ GTP KQKI+++T++L++
Sbjct: 79 VRLGNLYCDPLMTSTGHKISARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQ 138
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRA+ KRKQ +PNNAESE T V + +K E+ ++SA
Sbjct: 139 HGQISETNVYNWFQNRRAQSKRKQLITMPNNAESEVATEVESPKDQKTKSENFLPQQNSA 198
Query: 120 PPPRD----------------------EDIYPQSPDL-------------GIDQMIGKME 144
P D E+I+P + G D IGKME
Sbjct: 199 SRPEDLCFQNPEIGSRLHFLDQQTHKEENIFPSDGGIKPSGNPSQVAFYAGNDHQIGKME 258
Query: 145 IPGSFSFHWQVDRYDMLG 162
+PGS++ + + Y M G
Sbjct: 259 VPGSYNPYQHTEDYSMTG 276
>gi|388509298|gb|AFK42715.1| unknown [Lotus japonicus]
Length = 223
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 105/159 (66%), Gaps = 8/159 (5%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + K+TARQRWTPTP QLQ+LE ++D+ GTP KQKI+++ EL +
Sbjct: 57 LRLGNLYCDPLMVCSGHKITARQRWTPTPLQLQMLEQIFDQGNGTPSKQKIKEIAIELGQ 116
Query: 61 HGQISETNVYNWFQNRRARLKRKQSG-VVPNNAESEAETVTHA----ESRKQNPESIQSL 115
HGQISETNVYNWFQNRRAR KRKQ P++AE EA E R ES+Q L
Sbjct: 117 HGQISETNVYNWFQNRRARSKRKQLAPTTPSHAELEAAETEAVESPKEKRISAAESVQVL 176
Query: 116 ---EDSAPPPRDEDIYPQSPDLGIDQMIGKMEIPGSFSF 151
E+S+ P R +D Y QSPD+G +Q++GK+E +
Sbjct: 177 QPYENSSSPHRLKDFYIQSPDIGFEQLLGKIEAGAALVL 215
>gi|356517925|ref|XP_003527636.1| PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max]
Length = 225
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 101/149 (67%), Gaps = 4/149 (2%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP +A K+TARQRWTPTP QLQ+LE ++DE GTP KQKI+D+T EL +
Sbjct: 62 LRLGNLYCDPLMACSGHKITARQRWTPTPLQLQVLERIFDEGNGTPSKQKIKDITIELGQ 121
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLE---- 116
HGQISETNVYNWFQNRRAR KRKQ N E E ET ES K+ + +
Sbjct: 122 HGQISETNVYNWFQNRRARSKRKQLTPALNVVEPEVETEVEVESPKEKKTRAEGFQVQPY 181
Query: 117 DSAPPPRDEDIYPQSPDLGIDQMIGKMEI 145
+++ P R +D+Y QSPD+GI+ +G +E
Sbjct: 182 ENSSPHRIKDMYIQSPDIGINLSLGGLEF 210
>gi|357125613|ref|XP_003564486.1| PREDICTED: WUSCHEL-related homeobox 8-like [Brachypodium
distachyon]
Length = 273
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 113/202 (55%), Gaps = 40/202 (19%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y DP + G K+TARQRWTPT QLQILE ++D+ GTP KQKI+D+TAEL++
Sbjct: 72 MRLGNMYCDPLMVHGGHKITARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQ 131
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNA----------------ESEAETVTHAES 104
HGQISETNVYNWFQNRRAR KRKQ+ +PNNA +S+ + +
Sbjct: 132 HGQISETNVYNWFQNRRARSKRKQAASLPNNAESEAEADEESPTEKKPKSDGPLHQNMAT 191
Query: 105 RKQNPESIQSLEDSAPPPRDED---IY--------PQSPDLG-------------IDQMI 140
R NPE I + +++ +Y S LG IDQ +
Sbjct: 192 RAHNPERISEMHRHLDMEHEQNRGMMYGSNSDNSSKSSGGLGQMSFYANVMSNPRIDQFL 251
Query: 141 GKMEIPGSFSFHWQVDRYDMLG 162
GK+E PGSFS + +DM G
Sbjct: 252 GKVETPGSFSQFRPGESFDMYG 273
>gi|242054789|ref|XP_002456540.1| hypothetical protein SORBIDRAFT_03g038080 [Sorghum bicolor]
gi|241928515|gb|EES01660.1| hypothetical protein SORBIDRAFT_03g038080 [Sorghum bicolor]
Length = 278
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR N Y DP + G K+TARQRW PTP QLQILE+++D+ GTP KQKI+++TAEL+
Sbjct: 79 MRFSNLYCDPLIIPGGHKITARQRWQPTPMQLQILENIFDQGNGTPSKQKIKEITAELSH 138
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLED 117
HGQISETNVYNWFQNRRAR KRKQ+ +PNNAESEAE + + K+ P+S + L+D
Sbjct: 139 HGQISETNVYNWFQNRRARSKRKQAASLPNNAESEAEVDEESLTDKK-PKSDRPLQD 194
>gi|326500718|dbj|BAJ95025.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519246|dbj|BAJ96622.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521428|dbj|BAJ96917.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y DP + G K+TARQRWTPT QLQILE ++D+ GTP KQKI+D+TAEL++
Sbjct: 74 MRLGNLYCDPLMVHGGHKITARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQ 133
Query: 61 HGQISETNVYNWFQNRRARLKRKQSG-VVPNNAESEAE 97
HGQISETNVYNWFQNRRAR KRKQ+ +PNNAESEAE
Sbjct: 134 HGQISETNVYNWFQNRRARSKRKQAASSLPNNAESEAE 171
>gi|414865514|tpg|DAA44071.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
gi|414879952|tpg|DAA57083.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 295
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R N Y DP + G K+TARQRW PTP QLQILE+++D+ GTP KQ+I+++TAEL+
Sbjct: 96 IRFSNLYCDPQIIPGGHKITARQRWQPTPMQLQILENIFDQGNGTPSKQRIKEITAELSH 155
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDS 118
HGQISETNVYNWFQNRRAR KRKQ+ +PNNAESEAE + + K+ P+S +SL+D+
Sbjct: 156 HGQISETNVYNWFQNRRARSKRKQAASLPNNAESEAEVDEESLTDKK-PKSDRSLQDN 212
>gi|223949065|gb|ACN28616.1| unknown [Zea mays]
gi|408690322|gb|AFU81621.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|414865513|tpg|DAA44070.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
gi|414879951|tpg|DAA57082.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 273
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R N Y DP + G K+TARQRW PTP QLQILE+++D+ GTP KQ+I+++TAEL+
Sbjct: 74 IRFSNLYCDPQIIPGGHKITARQRWQPTPMQLQILENIFDQGNGTPSKQRIKEITAELSH 133
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDS 118
HGQISETNVYNWFQNRRAR KRKQ+ +PNNAESEAE + + K+ P+S +SL+D+
Sbjct: 134 HGQISETNVYNWFQNRRARSKRKQAASLPNNAESEAEVDEESLTDKK-PKSDRSLQDN 190
>gi|356575375|ref|XP_003555817.1| PREDICTED: WUSCHEL-related homeobox 13-like [Glycine max]
Length = 284
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y D + SG K+T+RQRWTPTP QLQILE ++D+ GTP K+KI+++TAEL +
Sbjct: 76 VRLGNIYCDQLMTSGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQ 135
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KR+ V P+N ESE +T ++++K E QS +
Sbjct: 136 HGQISETNVYNWFQNRRARSKRRLQNVAPSNTESEVDTEVDSKNKKTKAEEEFQSQHNIT 195
Query: 120 PPPRDEDIYPQSPDLGIDQM 139
E + Q+P + D +
Sbjct: 196 TSGGAEKLCFQNPQVYSDHL 215
>gi|356568981|ref|XP_003552686.1| PREDICTED: WUSCHEL-related homeobox 13-like [Glycine max]
Length = 266
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + SG K+ +RQRWTP+ QLQILE ++D+ GTP K+KI+++T EL++
Sbjct: 64 IRLGNMYCDPLLGSGGHKIASRQRWTPSAMQLQILERIFDQGTGTPTKEKIKEITNELSQ 123
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPN-NAESEAETVTHAESRKQNPESIQSLEDSA 119
HGQISETNVYNWFQNRRAR KRKQ V P+ NAESE ET ++ +K P+ QS +
Sbjct: 124 HGQISETNVYNWFQNRRARSKRKQQNVAPSANAESEVETEVDSKDKKTKPDEFQSPPSVS 183
Query: 120 PPPRDEDI 127
P D+++
Sbjct: 184 AVPADDNL 191
>gi|195623526|gb|ACG33593.1| WUSCHEL-related homeobox 14 [Zea mays]
Length = 273
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R N Y DP + G K+TARQRW PTP QLQILE+++D+ GTP KQ+I+++TAEL+
Sbjct: 74 IRFSNLYCDPQIIPGGHKITARQRWQPTPMQLQILENIFDQGNGTPSKQRIKEITAELSH 133
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDS 118
HGQISETNVYNWFQNRRAR RKQ+ +PNNAESEAE + + K+ P+S +SL+D+
Sbjct: 134 HGQISETNVYNWFQNRRARSNRKQAASLPNNAESEAEVDEESLTDKK-PKSDRSLQDN 190
>gi|449456871|ref|XP_004146172.1| PREDICTED: WUSCHEL-related homeobox 13-like [Cucumis sativus]
gi|449495111|ref|XP_004159737.1| PREDICTED: WUSCHEL-related homeobox 13-like [Cucumis sativus]
Length = 282
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 115/201 (57%), Gaps = 41/201 (20%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y +P + S S K+T+RQRWTPTP QLQILE ++D+ GTP KQKI+++T+EL +
Sbjct: 82 MRLGNMYCEPLMTSSSHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELGQ 141
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHA-ESRKQNPESIQSLEDSA 119
HGQISE+NVYNWFQNRRAR KRKQ P ESE ET + + +K P Q+ + SA
Sbjct: 142 HGQISESNVYNWFQNRRARSKRKQQSAAPAYGESEVETEVESPKDKKTKPVDFQTNQSSA 201
Query: 120 PPPRDEDIYPQSPDL--------------------------------------GIDQMIG 141
P +D+ QSP++ G +Q+ G
Sbjct: 202 P--LGDDMCFQSPEMSSELHFLDPNTNKADTLFPSNGSLKTARSFSQMSFYEAGNEQLTG 259
Query: 142 KMEIPGSFSFHWQVDRYDMLG 162
K+E P ++S + Q + Y+M G
Sbjct: 260 KIETPENYSIYQQAEGYNMTG 280
>gi|357120297|ref|XP_003561864.1| PREDICTED: LOW QUALITY PROTEIN: WUSCHEL-related homeobox 8-like
[Brachypodium distachyon]
Length = 169
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y DP + G K+TARQRWTPT QLQILE ++D+ GTP KQKI+D+TAEL++
Sbjct: 43 MRLGNLYCDPLMVHGGHKITARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQ 102
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAE 97
HGQI ETNVYNWFQNRRAR KRKQ+ +PNN SEAE
Sbjct: 103 HGQI-ETNVYNWFQNRRARSKRKQAAFLPNNTXSEAE 138
>gi|356536482|ref|XP_003536766.1| PREDICTED: WUSCHEL-related homeobox 13-like [Glycine max]
Length = 281
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + SG K+T+RQRWTPTP QLQILE ++D+ GTP K+KI+++TAEL +
Sbjct: 68 VRLGNIYCDPLMTSGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQ 127
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVP-NNAESEAETVTHAESRKQNPE 110
HGQISETNVYNWFQNRRAR KRK V +N ESE ET ++ +K E
Sbjct: 128 HGQISETNVYNWFQNRRARSKRKLQNVAAYSNTESEVETEVDSKDKKTKAE 178
>gi|15237035|ref|NP_195280.1| WUSCHEL-related homeobox 13 [Arabidopsis thaliana]
gi|61217457|sp|O81788.1|WOX13_ARATH RecName: Full=WUSCHEL-related homeobox 13
gi|3367573|emb|CAA20025.1| homeodomain - like protein [Arabidopsis thaliana]
gi|7270506|emb|CAB80271.1| homeodomain-like protein [Arabidopsis thaliana]
gi|15081751|gb|AAK82530.1| AT4g35550/F8D20_60 [Arabidopsis thaliana]
gi|23308275|gb|AAN18107.1| At4g35550/F8D20_60 [Arabidopsis thaliana]
gi|37955227|gb|AAP37142.1| WOX13 protein [Arabidopsis thaliana]
gi|332661129|gb|AEE86529.1| WUSCHEL-related homeobox 13 [Arabidopsis thaliana]
Length = 268
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 109/194 (56%), Gaps = 35/194 (18%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
RMG Y DP ++S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+D+T EL++H
Sbjct: 77 RMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQH 136
Query: 62 GQISETNVYNWFQNRRARLKRKQ-------SGVVPNNAESEAETVTHAESRKQNPESIQS 114
GQI+E NVYNWFQNRRAR KRKQ + + E+E E + E R PES+
Sbjct: 137 GQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALN--EKRVVRPESLLG 194
Query: 115 LEDS-------------APPPRDEDIYPQSPDLGID-------------QMIGKMEIPGS 148
L D PR ED+ QSP++ D ++GKM + S
Sbjct: 195 LPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDVLSNPRDEHLVGKMGLAES 254
Query: 149 FSFHWQVDRYDMLG 162
++ + V+ Y M G
Sbjct: 255 YNLYDHVEDYGMSG 268
>gi|115440703|ref|NP_001044631.1| Os01g0818400 [Oryza sativa Japonica Group]
gi|75286325|sp|Q5QMM3.1|WOX8_ORYSJ RecName: Full=WUSCHEL-related homeobox 8; AltName: Full=OsWOX8;
AltName: Full=Protein WOX13
gi|56201899|dbj|BAD73349.1| putative HB2 homeodomain protein [Oryza sativa Japonica Group]
gi|113534162|dbj|BAF06545.1| Os01g0818400 [Oryza sativa Japonica Group]
gi|215696986|dbj|BAG90980.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189278|gb|EEC71705.1| hypothetical protein OsI_04217 [Oryza sativa Indica Group]
gi|222619452|gb|EEE55584.1| hypothetical protein OsJ_03880 [Oryza sativa Japonica Group]
Length = 267
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y DP + G K+TARQRWTPTP QLQILE+++D+ GTP KQKI+D+TAEL++
Sbjct: 69 MRLGNLYCDPLMVPGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQ 128
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNN 91
HGQISETNVYNWFQNRRAR KRKQ+ +PNN
Sbjct: 129 HGQISETNVYNWFQNRRARSKRKQAA-LPNN 158
>gi|388517213|gb|AFK46668.1| unknown [Medicago truncatula]
Length = 264
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 46/205 (22%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y D + +G K+T+RQRWTPTP QLQILE ++D+ GTP K+KI+++ EL++
Sbjct: 63 VRLGNLYCDSLMTAG-HKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIATELSQ 121
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
HGQISETNVYNWFQNRRAR KRK +N ESE ET ++ +K PE S + +A
Sbjct: 122 HGQISETNVYNWFQNRRARSKRKMQNGGTSNTESEVETEVDSKDKKTKPEEFHSQQSAAL 181
Query: 121 PPRDEDIYPQSP----------------------DLGI---------------------D 137
DE++ Q+ D GI D
Sbjct: 182 G--DENLCFQNQEKCSELQYLNHGSNKTYSVFPLDGGIRSTRNLSGVSLYDEVLSNSRND 239
Query: 138 QMIGKMEIPGSFSFHWQVDRYDMLG 162
+ GKME+ GS++ + Q + +++ G
Sbjct: 240 YLGGKMEVSGSYNIYQQAEDFNLAG 264
>gi|255639435|gb|ACU20012.1| unknown [Glycine max]
Length = 180
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + SG K+ +R+RWTP+ QLQILE ++D+ GTP K+KI+++T EL++
Sbjct: 64 IRLGNMYCDPLLGSGGHKIASRRRWTPSAMQLQILERIFDQGTGTPTKEKIKEITNELSQ 123
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPN-NAESEAETVTHAESRKQNPESI 112
HGQISETNVYNWFQNRRAR KRKQ V P+ NAESE ET ++ +K P I
Sbjct: 124 HGQISETNVYNWFQNRRARSKRKQQNVAPSANAESEVETEVDSKDKKTKPGRI 176
>gi|217073748|gb|ACJ85234.1| unknown [Medicago truncatula]
Length = 264
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 112/205 (54%), Gaps = 46/205 (22%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y D + +G K+T+RQRWTPTP QLQILE ++D+ GTP K+KI+++ EL++
Sbjct: 63 VRLGNLYCDSLMTAG-HKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIATELSQ 121
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
HGQISETNVYNWFQNRRAR KRK +N ESE ET ++ ++ PE S + +A
Sbjct: 122 HGQISETNVYNWFQNRRARSKRKMQNGGTSNTESEVETEVDSKDKRTKPEEFHSQQSAAL 181
Query: 121 PPRDEDIYPQS----------------------PDLGI---------------------D 137
DE++ Q+ D GI D
Sbjct: 182 G--DENLCFQNQEKCFELQYLNHGSNKTYFVFPSDGGIRSTRNLSGVSLYDEVLSNSRND 239
Query: 138 QMIGKMEIPGSFSFHWQVDRYDMLG 162
+ GKME+ GS++ + Q + +++ G
Sbjct: 240 YLGGKMEVSGSYNIYQQAEDFNLAG 264
>gi|297798368|ref|XP_002867068.1| homeobox-leucine zipper protein [Arabidopsis lyrata subsp. lyrata]
gi|297312904|gb|EFH43327.1| homeobox-leucine zipper protein [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 109/193 (56%), Gaps = 35/193 (18%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
R+G Y DP ++S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+++T EL++H
Sbjct: 77 RLGGLYADPMMSSIGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKEITEELSQH 136
Query: 62 GQISETNVYNWFQNRRARLKRKQ-------SGVVPNNAESEAETVTHAESRKQNPESIQS 114
G+I+E NVYNWFQNRRAR KRKQ + + E+E E + R PES+ S
Sbjct: 137 GEIAEQNVYNWFQNRRARSKRKQQGGGSSGNNNGESEVETEVEALNEKRVR---PESLLS 193
Query: 115 LEDS------------APPPRDEDIYPQSPDLGID-------------QMIGKMEIPGSF 149
L D PR ED+ QSP++ D ++GKM + S+
Sbjct: 194 LPDGNNNNNVLGSTTTTTTPRPEDLCFQSPEMSSDLHLLGVLANPRDEHLVGKMGLSESY 253
Query: 150 SFHWQVDRYDMLG 162
+ + V+ Y M G
Sbjct: 254 NLYDHVEDYGMSG 266
>gi|295913230|gb|ADG57873.1| transcription factor [Lycoris longituba]
Length = 153
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 76/97 (78%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y DP V SG K+ ARQRW PTP QLQIL+ ++D+ GTP KQKI+++ +L++
Sbjct: 50 MRLGNLYCDPLVTSGGHKIAARQRWIPTPIQLQILDGIFDQGNGTPSKQKIKEIAHDLSQ 109
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAE 97
HGQISETNVYNWFQNRRAR KRKQ+ + N+ E EAE
Sbjct: 110 HGQISETNVYNWFQNRRARSKRKQTNALANSTELEAE 146
>gi|255539254|ref|XP_002510692.1| DNA binding protein, putative [Ricinus communis]
gi|223551393|gb|EEF52879.1| DNA binding protein, putative [Ricinus communis]
Length = 231
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 108/181 (59%), Gaps = 28/181 (15%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+ NPY PF + K+ +RQRW P QL+ILE ++ + K TP +Q+I+++ +L+
Sbjct: 59 MRLQNPYAGPFFSYTLNKIPSRQRWAPKAEQLEILESIFTQSKATPGRQRIKEIATQLSL 118
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVV-------PNNAESE------------AETVTH 101
HG ISETNVYNWFQNRRAR KRKQS + PNN ES+ E T
Sbjct: 119 HGPISETNVYNWFQNRRARSKRKQSALAPSPPPPPPNNRESQVEVEPEPEPEPELELETA 178
Query: 102 AESRKQNPESIQSLEDSAPPPRDEDIYPQSPDL-GIDQMIGKMEIPGSFSFHWQVDRYDM 160
E R Q +++ + + +Y +P++ GIDQ+IGK E+P S+ +WQVD++D+
Sbjct: 179 KEKRTQLDDNLAFMVN--------HMYFHTPEIGGIDQLIGKAEVPMSYDSYWQVDQHDL 230
Query: 161 L 161
L
Sbjct: 231 L 231
>gi|194698924|gb|ACF83546.1| unknown [Zea mays]
gi|413952113|gb|AFW84762.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 308
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R N Y DP + G K+TARQRW PTP QLQILE ++D+ GTP KQKI+++TAEL++
Sbjct: 98 LRFSNLYCDPLIIPGGHKITARQRWQPTPMQLQILESIFDQGNGTPSKQKIKEITAELSQ 157
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGV-VPNN 91
HGQISETNVYNWFQNRRAR KRKQ+ +PNN
Sbjct: 158 HGQISETNVYNWFQNRRARSKRKQAAASLPNN 189
>gi|194695732|gb|ACF81950.1| unknown [Zea mays]
gi|195606070|gb|ACG24865.1| WUSCHEL-related homeobox 14 [Zea mays]
gi|408690272|gb|AFU81596.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|413952112|gb|AFW84761.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 282
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R N Y DP + G K+TARQRW PTP QLQILE ++D+ GTP KQKI+++TAEL++
Sbjct: 72 LRFSNLYCDPLIIPGGHKITARQRWQPTPMQLQILESIFDQGNGTPSKQKIKEITAELSQ 131
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGV-VPNN 91
HGQISETNVYNWFQNRRAR KRKQ+ +PNN
Sbjct: 132 HGQISETNVYNWFQNRRARSKRKQAAASLPNN 163
>gi|30686974|ref|NP_173493.2| WUSCHEL-related homeobox 14 [Arabidopsis thaliana]
gi|61217651|sp|Q9LM84.1|WOX14_ARATH RecName: Full=WUSCHEL-related homeobox 14; AltName:
Full=Homeodomain protein PALE-2; Short=AtPALE2
gi|8886930|gb|AAF80616.1|AC069251_9 F2D10.19 [Arabidopsis thaliana]
gi|20152544|emb|CAD29665.1| homeodomain protein PALE-2 [Arabidopsis thaliana]
gi|332191891|gb|AEE30012.1| WUSCHEL-related homeobox 14 [Arabidopsis thaliana]
Length = 211
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 88/144 (61%), Gaps = 11/144 (7%)
Query: 3 MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
M YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ EL++H
Sbjct: 73 MVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEH 132
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
GQI+ETNVYNWFQNRRAR KRKQ N +++ VT E R S DS
Sbjct: 133 GQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGL 184
Query: 122 PRDEDIYPQSPDLGIDQM--IGKM 143
E I SPDLGI+ + IGK
Sbjct: 185 ESYEHILFPSPDLGIEHLLSIGKF 208
>gi|297845044|ref|XP_002890403.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336245|gb|EFH66662.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 88/140 (62%), Gaps = 11/140 (7%)
Query: 7 YFDPF-VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQIS 65
YFDP +S S +++ R RWTPT QLQILE +Y+E GTP +++I+++ EL++HGQI+
Sbjct: 72 YFDPMGTSSSSHRISTRHRWTPTSTQLQILESIYEEGSGTPNRRRIREIATELSEHGQIT 131
Query: 66 ETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDE 125
ETNVYNWFQNRRAR KRKQ N +++ TVT E R S DS E
Sbjct: 132 ETNVYNWFQNRRARSKRKQPQTTTANGQADDVTVTAEERR--------SCGDSGGLESYE 183
Query: 126 DIYPQSPDLGIDQM--IGKM 143
I SPDLGI+ + IGK
Sbjct: 184 HILFPSPDLGIEHLLSIGKF 203
>gi|351726702|ref|NP_001238671.1| uncharacterized protein LOC100527354 [Glycine max]
gi|255632155|gb|ACU16430.1| unknown [Glycine max]
Length = 148
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+R+GN Y DP + SG K+ +RQRWTPT QLQILE ++D+ GTP K+KI+++T EL++
Sbjct: 65 IRLGNMYCDPLLGSGGLKIASRQRWTPTAMQLQILERIFDQGIGTPTKEKIKEITNELSQ 124
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
HGQISETNVYNWFQNRRAR KRKQ
Sbjct: 125 HGQISETNVYNWFQNRRARSKRKQ 148
>gi|297845046|ref|XP_002890404.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336246|gb|EFH66663.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 197
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 12/144 (8%)
Query: 3 MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
MG YFDP VAS S ++ R RWTPT QLQILE++Y E GTP ++I+++T EL++H
Sbjct: 57 MGGGYFDPMVASSSAHGMSTRHRWTPTSMQLQILENIYKEGSGTPNPRRIKEITMELSEH 116
Query: 62 GQISETNVYNWFQNRRARLKRKQ---SGVVPNNAESEAETVTHAESRKQNPESIQSLEDS 118
G+I+E +VYNWFQNRRAR KRKQ + + A+ A T T E DS
Sbjct: 117 GEITEKSVYNWFQNRRARSKRKQPQTTTITSGQADDAAVTTT--------DERESCGGDS 168
Query: 119 APPPRDEDIYPQSPDLGIDQMIGK 142
E I SPDLGI+ ++ +
Sbjct: 169 GAFESYEHILFPSPDLGIEHLLNR 192
>gi|442968880|dbj|BAM76366.1| WUSCHEL-related homeobox protein 13A [Physcomitrella patens subsp.
patens]
Length = 231
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 69/91 (75%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
D + K TARQRWTP+ QLQILE ++++ GTP KQ+I+++TAEL++HG ISET
Sbjct: 49 MDHLTGTPPHKSTARQRWTPSQHQLQILEKLFEQGSGTPNKQRIKEITAELSQHGAISET 108
Query: 68 NVYNWFQNRRARLKRKQSGVVPNNAESEAET 98
NVYNWFQNR+AR KRKQ V P + ESEA+T
Sbjct: 109 NVYNWFQNRKARAKRKQQLVTPRDGESEADT 139
>gi|168050374|ref|XP_001777634.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670977|gb|EDQ57536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 69/91 (75%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
D + K TARQRWTP+ QLQILE ++++ GTP KQ+I+++TAEL++HG ISET
Sbjct: 48 MDHLTGTPPHKSTARQRWTPSQHQLQILEKLFEQGSGTPNKQRIKEITAELSQHGAISET 107
Query: 68 NVYNWFQNRRARLKRKQSGVVPNNAESEAET 98
NVYNWFQNR+AR KRKQ V P + ESEA+T
Sbjct: 108 NVYNWFQNRKARAKRKQQLVTPRDGESEADT 138
>gi|116811078|emb|CAJ84147.1| WOX13 protein [Oryza sativa]
Length = 65
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/65 (80%), Positives = 60/65 (92%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
TARQRWTPTP QLQILE+++D+ GTP KQKI+D+TAEL++HGQISETNVYNWFQNRRAR
Sbjct: 1 TARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRAR 60
Query: 80 LKRKQ 84
KRKQ
Sbjct: 61 SKRKQ 65
>gi|168009999|ref|XP_001757692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690968|gb|EDQ77332.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 163
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 69/91 (75%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
D + + K TARQRWTP+ QLQILE ++++ GTP K +I+++TAEL++HG ISET
Sbjct: 47 MDQMTGTPTHKSTARQRWTPSQHQLQILEKLFEQGSGTPNKVRIKEITAELSQHGAISET 106
Query: 68 NVYNWFQNRRARLKRKQSGVVPNNAESEAET 98
NVYNWFQNR+AR KRKQ V P + ESEA++
Sbjct: 107 NVYNWFQNRKARAKRKQQLVTPKDGESEADS 137
>gi|442968885|dbj|BAM76367.1| WUSCHEL-related homeobox protein 13B [Physcomitrella patens subsp.
patens]
Length = 231
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 69/91 (75%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
D + + K TARQRWTP+ QLQILE ++++ GTP K +I+++TAEL++HG ISET
Sbjct: 49 MDQMTGTPTHKSTARQRWTPSQHQLQILEKLFEQGSGTPNKVRIKEITAELSQHGAISET 108
Query: 68 NVYNWFQNRRARLKRKQSGVVPNNAESEAET 98
NVYNWFQNR+AR KRKQ V P + ESEA++
Sbjct: 109 NVYNWFQNRKARAKRKQQLVTPKDGESEADS 139
>gi|380848544|emb|CBX45505.1| hypothetical protein [Ceratopteris richardii]
Length = 183
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
D + + QK T+RQRWTP+ QLQILE ++ + G P +Q+I+++ AEL+++GQISET
Sbjct: 8 LDSALNTMGQKFTSRQRWTPSQTQLQILEKLFQQGNGAPSRQRIKEICAELSQYGQISET 67
Query: 68 NVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQ 107
NVYNWFQNRRAR KRKQ GV N ESE +T ++ K+
Sbjct: 68 NVYNWFQNRRARTKRKQQGVA--NGESELDTDVDSQEEKR 105
>gi|116811092|emb|CAJ84154.1| WOX13 protein [Populus trichocarpa]
Length = 65
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 59/65 (90%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
TARQRWTPTP QLQILE ++D+ GTP KQKI+++T+EL++HGQISETNVYNWFQNRRAR
Sbjct: 1 TARQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRAR 60
Query: 80 LKRKQ 84
KRKQ
Sbjct: 61 SKRKQ 65
>gi|116789210|gb|ABK25160.1| unknown [Picea sitchensis]
Length = 367
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 85/144 (59%), Gaps = 24/144 (16%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
+ GNP F + +ARQRWTP+ QLQILE+++++ TP KQKI+++T EL++
Sbjct: 74 LAQGNPGF---------RASARQRWTPSQTQLQILENLFEQGHATPSKQKIKEITMELSQ 124
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAE------------SRKQN 108
HGQISETNVYNWFQNR+AR KRKQ +P+ E+E T E S QN
Sbjct: 125 HGQISETNVYNWFQNRKARAKRKQ---LPSQRGGESENETDDEYPGEKRFKPQRDSNAQN 181
Query: 109 PESIQSLEDSAPPPRDEDIYPQSP 132
P+S S D P + +D+ P
Sbjct: 182 PKSGHSEADPQAPNKSDDVVQHRP 205
>gi|116811094|emb|CAJ84169.1| WOX13B protein [Zea mays]
Length = 65
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 58/65 (89%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
TARQRW PTP QLQILE ++D+ GTP KQKI+++TAEL++HGQISETNVYNWFQNRRAR
Sbjct: 1 TARQRWQPTPMQLQILESIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRAR 60
Query: 80 LKRKQ 84
KRKQ
Sbjct: 61 SKRKQ 65
>gi|357503067|ref|XP_003621822.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355496837|gb|AES78040.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 183
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 11 FVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
+GS +L RQRWTPTP QLQ LE +++ GTP K+KI+++TA+L KHGQISET+VY
Sbjct: 57 LTLTGSTRL--RQRWTPTPVQLQSLERIFEAETGTPSKEKIKEITADLTKHGQISETSVY 114
Query: 71 NWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQS 114
NWFQNRRAR K KQ V N E E ET + +K PE + S
Sbjct: 115 NWFQNRRARSKGKQQNNV--NDEPEVETEVDSNDKKTEPEIVAS 156
>gi|89330219|emb|CAJ84168.1| WOX13A protein [Zea mays]
Length = 65
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 58/65 (89%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
TARQRW PTP QLQILE+++D+ GTP KQ+I+++TAEL+ HGQISETNVYNWFQNRRAR
Sbjct: 1 TARQRWQPTPMQLQILENIFDQGNGTPSKQRIKEITAELSHHGQISETNVYNWFQNRRAR 60
Query: 80 LKRKQ 84
KRKQ
Sbjct: 61 SKRKQ 65
>gi|380848542|emb|CBX45504.1| hypothetical protein [Ceratopteris richardii]
Length = 351
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
DP + + S RQRWTP+ +QLQILE V++ GTP KQKI+++T EL KHG ISET
Sbjct: 118 LDPVLVARSN---GRQRWTPSQSQLQILESVFETSVGTPSKQKIKEITMELGKHGPISET 174
Query: 68 NVYNWFQNRRARLKRKQ 84
NVYNWFQNR+AR KRKQ
Sbjct: 175 NVYNWFQNRKARAKRKQ 191
>gi|302757980|ref|XP_002962413.1| hypothetical protein SELMODRAFT_404178 [Selaginella moellendorffii]
gi|302764406|ref|XP_002965624.1| hypothetical protein SELMODRAFT_407157 [Selaginella moellendorffii]
gi|300166438|gb|EFJ33044.1| hypothetical protein SELMODRAFT_407157 [Selaginella moellendorffii]
gi|300169274|gb|EFJ35876.1| hypothetical protein SELMODRAFT_404178 [Selaginella moellendorffii]
Length = 342
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 60/75 (80%)
Query: 10 PFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNV 69
P + K T+RQRWTP+ QL+ILE ++ + GTP +Q+I+++T+EL++HGQISETNV
Sbjct: 146 PMLLGIHHKPTSRQRWTPSQNQLRILERLFKQGNGTPNRQRIKEITSELSQHGQISETNV 205
Query: 70 YNWFQNRRARLKRKQ 84
YNWFQNR+AR KRKQ
Sbjct: 206 YNWFQNRKARAKRKQ 220
>gi|15218015|ref|NP_173494.1| putative WUSCHEL-related homeobox 10 [Arabidopsis thaliana]
gi|61217650|sp|Q9LM83.1|WOX10_ARATH RecName: Full=Putative WUSCHEL-related homeobox 10
gi|8886931|gb|AAF80617.1|AC069251_10 F2D10.20 [Arabidopsis thaliana]
gi|332191892|gb|AEE30013.1| putative WUSCHEL-related homeobox 10 [Arabidopsis thaliana]
Length = 197
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 12/144 (8%)
Query: 3 MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
M YFDP VAS S ++ R RWTPT QLQILE++Y E GTP ++I+++T EL++H
Sbjct: 57 MRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEH 116
Query: 62 GQISETNVYNWFQNRRARLKRKQ---SGVVPNNAESEAETVTHAESRKQNPESIQSLEDS 118
GQI E NVY+WFQNRRAR KRKQ + + + A+ A T T R +DS
Sbjct: 117 GQIMEKNVYHWFQNRRARSKRKQPPTTTITSSQADDAAVTTTEERGR--------CGDDS 168
Query: 119 APPPRDEDIYPQSPDLGIDQMIGK 142
E I SPDLGI+ ++ +
Sbjct: 169 GGFESYEHILFPSPDLGIEHLLNR 192
>gi|18419580|gb|AAL69362.1|AF462199_1 putative homeobox-containing protein [Narcissus pseudonarcissus]
Length = 95
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 48 KQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAE 97
KQKI+++T +L +HGQ+SETNVYNWFQNRRAR KRKQ+ V+PNN E EAE
Sbjct: 1 KQKIKEITLKLVQHGQLSETNVYNWFQNRRARSKRKQATVLPNNNEPEAE 50
>gi|302787372|ref|XP_002975456.1| hypothetical protein SELMODRAFT_451355 [Selaginella moellendorffii]
gi|300157030|gb|EFJ23657.1| hypothetical protein SELMODRAFT_451355 [Selaginella moellendorffii]
Length = 242
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 47/58 (81%)
Query: 18 KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
K T RQRW P+ AQ+++LE +YD GTP KQ+++++TAEL++ G ++E+NVYNWFQN
Sbjct: 111 KATTRQRWAPSQAQVKLLESLYDVGMGTPHKQRVREITAELSQLGPVNESNVYNWFQN 168
>gi|302761286|ref|XP_002964065.1| hypothetical protein SELMODRAFT_438787 [Selaginella moellendorffii]
gi|300167794|gb|EFJ34398.1| hypothetical protein SELMODRAFT_438787 [Selaginella moellendorffii]
Length = 246
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 47/58 (81%)
Query: 18 KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
K T RQRW P+ AQ+++LE +YD GTP KQ+++++TAEL++ G ++E+NVYNWFQN
Sbjct: 104 KATTRQRWAPSQAQVKLLESLYDVGMGTPHKQRVREITAELSQLGPVNESNVYNWFQN 161
>gi|229359301|emb|CAT02909.1| putative wuschel homeobox protein WOX13 [Ginkgo biloba]
Length = 46
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 42/46 (91%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
TP QLQILE+++++ GTP KQKI+++TAELA+HGQISETNVYNWF
Sbjct: 1 TPMQLQILENIFEQGNGTPSKQKIKEITAELAQHGQISETNVYNWF 46
>gi|229359351|emb|CAT02934.1| putative wuschel homeobox protein WOX13 [Pinus sylvestris]
Length = 50
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 23 QRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
QR TP+ QLQILE ++D+ KGTP KQKI+++TAEL++HG ISETNVYNW
Sbjct: 1 QRGTPSQVQLQILEKIFDQDKGTPSKQKIKEITAELSQHGHISETNVYNW 50
>gi|168049453|ref|XP_001777177.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671405|gb|EDQ57957.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 22 RQRWTPTPAQLQILEHVYDECKG-TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
R RW+ QLQ LE ++++ G TP K +I+D+T EL + G ISETNVYNWFQNR+AR
Sbjct: 14 RSRWSANQQQLQNLESIFEQGNGNTPNKARIKDITIELNQFGHISETNVYNWFQNRKARA 73
Query: 81 KRK 83
KRK
Sbjct: 74 KRK 76
>gi|229359343|emb|CAT02930.1| putative wuschel homeobox protein WOX13 [Gnetum gnemon]
Length = 50
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 41/50 (82%)
Query: 23 QRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
QRWTP+ +Q+ IL+ VY+ G P KQKI+D+TAEL++HG +SETNVYNW
Sbjct: 1 QRWTPSQSQIDILDRVYEASNGNPNKQKIKDITAELSQHGPVSETNVYNW 50
>gi|359802457|emb|CBX45506.1| hypothetical protein [Ceratopteris richardii]
Length = 311
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T R RWTPT Q+QILE +++ TP + I D+ A+L +G I E NV+ WFQNR+AR
Sbjct: 221 TPRPRWTPTQEQIQILESIFNSGTTTPSRDMIVDIAAQLRNYGNIGEANVFYWFQNRKAR 280
Query: 80 LKRK 83
KRK
Sbjct: 281 AKRK 284
>gi|302765042|ref|XP_002965942.1| hypothetical protein SELMODRAFT_451357 [Selaginella moellendorffii]
gi|300166756|gb|EFJ33362.1| hypothetical protein SELMODRAFT_451357 [Selaginella moellendorffii]
Length = 344
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ RW P QL++L +++E + KQ+I+++ +LA+ G ++E NV+NWF NR+AR
Sbjct: 25 VVKVRWKPNEEQLRMLVRLFEEEGDSINKQRIKEIAVDLARQGDVTEANVHNWFHNRKAR 84
Query: 80 LKRKQSGVVPNNAESEAET 98
KRKQ + N+ ESE +T
Sbjct: 85 AKRKQKQMQQNDGESEVDT 103
>gi|302769904|ref|XP_002968371.1| hypothetical protein SELMODRAFT_451358 [Selaginella
moellendorffii]
gi|300164015|gb|EFJ30625.1| hypothetical protein SELMODRAFT_451358 [Selaginella
moellendorffii]
Length = 315
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ RW P QL++L +++E + KQ+I+++ +LA+ G ++E NV+NWF NR+AR
Sbjct: 21 VVKVRWKPNEEQLRMLVRLFEEEGDSINKQRIKEIAVDLARQGDVTEANVHNWFHNRKAR 80
Query: 80 LKRKQSGVVPNNAESEAET 98
KRKQ + N+ ESE +T
Sbjct: 81 AKRKQKQMQQNDGESEVDT 99
>gi|359802459|emb|CBX45507.1| hypothetical protein [Ceratopteris richardii]
Length = 213
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 55/107 (51%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
A+ S T R RW PTP Q+ +LE +++ TP + I D+ + L + G I E NV+
Sbjct: 98 TANTSGACTPRTRWCPTPEQINVLETLFNSGTTTPTRAMIVDIASCLNQFGSIVEANVFY 157
Query: 72 WFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDS 118
WFQNR+AR KRK + ES T A S N + L+ S
Sbjct: 158 WFQNRKARAKRKLRMQAQLHQESAGATSISASSSPTNGFYMNELKQS 204
>gi|169667041|gb|ACA64093.1| MAEWEST protein [Petunia x hybrida]
Length = 376
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 16 SQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
+Q+L RW PTP QLQ LE +Y TP ++IQ +TA+L ++G+I NV+ WFQN
Sbjct: 71 TQQLVVSSRWNPTPEQLQTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQN 130
Query: 76 RRARLKRKQSGVVPNNAESEA 96
+AR ++K+ + +NA ++
Sbjct: 131 HKARERQKRRRQLESNAANDG 151
>gi|303283958|ref|XP_003061270.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457621|gb|EEH54920.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 202
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTPAQL LE ++ GTP + +T ELAK G I+E NVYNWFQN++AR+K+
Sbjct: 127 RWNPTPAQLARLEELFLTGMGTPNGELRTQITEELAKLGPINEANVYNWFQNKKARMKKA 186
Query: 84 Q 84
+
Sbjct: 187 E 187
>gi|294464183|gb|ADE77607.1| unknown [Picea sitchensis]
Length = 159
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 51/74 (68%)
Query: 23 QRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
+RW+PT QL+ILE +Y+ TP+ ++IQ + AEL +HG ++ NV+ WF+NR+AR +R
Sbjct: 10 RRWSPTREQLRILETIYNGGNQTPKPEQIQVIAAELRRHGTVAGINVFYWFKNRKARERR 69
Query: 83 KQSGVVPNNAESEA 96
K ++ +A + +
Sbjct: 70 KTRSILEGHAAANS 83
>gi|303278178|ref|XP_003058382.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459542|gb|EEH56837.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 581
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 45/62 (72%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTPAQL LE ++ GTP++++ +T ELAK G I+E NV+NWF+N+++++KR
Sbjct: 477 RWNPTPAQLARLEELFLTGMGTPKREQRTQITEELAKLGPINEANVFNWFKNKKSKMKRD 536
Query: 84 QS 85
S
Sbjct: 537 AS 538
>gi|342672241|gb|AEL30893.1| STENOFOLIA 1 [Nicotiana sylvestris]
Length = 399
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
+Q+L RW PTP QLQ LE +Y TP ++IQ +TA+L ++G+I NV+ WFQ
Sbjct: 72 NTQQLVVSSRWNPTPEQLQTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQ 131
Query: 75 NRRARLKRKQ 84
N +AR ++K+
Sbjct: 132 NHKARERQKR 141
>gi|412985378|emb|CCO18824.1| predicted protein [Bathycoccus prasinos]
Length = 448
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%)
Query: 11 FVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
F +G + + RW PT AQ + LE ++ TP+++ ++ +T EL+ G I E NVY
Sbjct: 345 FSNTGVYSVPGKVRWQPTTAQFERLEQLFAIDTTTPQRENLKQVTEELSALGPIQECNVY 404
Query: 71 NWFQNRRARLKRKQSGVVPNNAESE 95
NWFQN++ARLK+++ E E
Sbjct: 405 NWFQNKKARLKKREQDAARERMEEE 429
>gi|255079344|ref|XP_002503252.1| predicted protein [Micromonas sp. RCC299]
gi|226518518|gb|ACO64510.1| predicted protein [Micromonas sp. RCC299]
Length = 190
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RWTP+ AQL LE ++ GTP +T ELAK G ++E NVYNWFQN++AR K+K
Sbjct: 119 RWTPSAAQLARLEELFATGMGTPNGDLRTKITDELAKLGPVNEANVYNWFQNKKARTKKK 178
>gi|356541244|ref|XP_003539089.1| PREDICTED: WUSCHEL-related homeobox 2-like [Glycine max]
Length = 261
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
++G++ + A RW PT Q+ +LE++Y + TP ++IQ +TA L +G I NV+ W
Sbjct: 20 SNGNEGVAASSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYW 79
Query: 73 FQNRRARLKRKQ 84
FQN +AR ++KQ
Sbjct: 80 FQNHKARQRQKQ 91
>gi|412993060|emb|CCO16593.1| predicted protein [Bathycoccus prasinos]
Length = 1523
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%)
Query: 11 FVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
F +G + + RW T AQL+ LE ++ TPR +K++ +T EL+ G I E NV+
Sbjct: 1388 FSNTGVYSVPGKVRWQRTTAQLERLEQLFANDTTTPRGEKLKQVTEELSALGPIQECNVF 1447
Query: 71 NWFQNRRARLKRKQSGVVPNNAESEA 96
NWFQN+++RLK+ + E+ A
Sbjct: 1448 NWFQNKKSRLKKLEEDAAREKMEAAA 1473
>gi|308810595|ref|XP_003082606.1| HB2 homeodomain protein (ISS) [Ostreococcus tauri]
gi|116061075|emb|CAL56463.1| HB2 homeodomain protein (ISS) [Ostreococcus tauri]
Length = 203
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RWT TP Q +ILE ++ + + P + ++ ++T L +HG + E+NVYNWFQNRR+R K+
Sbjct: 137 RWTGTPTQYEILEDLFQKGEQPPVRDRLTELTEMLKQHGPVQESNVYNWFQNRRSREKKL 196
Query: 84 QS 85
Q+
Sbjct: 197 QA 198
>gi|229359319|emb|CAT02918.1| putative wuschel homeobox protein WOX13 [Amborella trichopoda]
Length = 46
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
TP QLQILE ++ + GTP KQKI+++T+EL +HG I+E+NVYNWF
Sbjct: 1 TPMQLQILESLFIQGSGTPTKQKIKEITSELTQHGPITESNVYNWF 46
>gi|118483898|gb|ABK93839.1| unknown [Populus trichocarpa]
Length = 213
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 9/103 (8%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+D+TA+L+++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 138
Query: 84 QSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDED 126
Q + + ++H+ R +P +I SL+ +DED
Sbjct: 139 Q--------KRNSLGLSHS-PRTPSPITIISLDTRGEVEKDED 172
>gi|162460274|ref|NP_001105960.1| WUS1 protein [Zea mays]
gi|116811056|emb|CAJ84136.1| WUS1 protein [Zea mays]
Length = 312
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 23 QRWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA--R 79
RWTPTP Q++IL+ +Y C +P ++IQ +TA L +HG+I NV+ WFQN +A R
Sbjct: 39 SRWTPTPEQIRILKELYYGCGIRSPNSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARER 98
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIY 128
KR+ + + N + ++ H +P S +APP Y
Sbjct: 99 QKRRLTNLDVNVPVAADDSAAHLGVLSLSPSS--GCSGAAPPSPTLGFY 145
>gi|356522848|ref|XP_003530055.1| PREDICTED: WUSCHEL-related homeobox 1-like [Glycine max]
Length = 336
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
+G+ + RW PTP QL+ LE +Y TP ++IQ +TA+L + G I NV+ WF
Sbjct: 72 NGAAPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGNIEGKNVFYWF 131
Query: 74 QNRRARLKRKQSGVVPNNAES 94
QN +AR ++K+ + ++AE+
Sbjct: 132 QNHKARERQKRRRQMESDAET 152
>gi|224137604|ref|XP_002327167.1| predicted protein [Populus trichocarpa]
gi|222835482|gb|EEE73917.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 9/103 (8%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+D+TA+L+++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 138
Query: 84 QSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDED 126
Q + + ++H+ R +P +I SL+ +DED
Sbjct: 139 Q--------KRNSLGLSHS-PRTPSPITIISLDTRGEVEKDED 172
>gi|242089333|ref|XP_002440499.1| hypothetical protein SORBIDRAFT_09g002010 [Sorghum bicolor]
gi|241945784|gb|EES18929.1| hypothetical protein SORBIDRAFT_09g002010 [Sorghum bicolor]
Length = 268
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
Q + RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN
Sbjct: 16 QVVAGSTRWCPTPEQLMILEEMYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYWFQNH 75
Query: 77 RARLKRK 83
+AR ++K
Sbjct: 76 KARDRQK 82
>gi|163838708|ref|NP_001106239.1| putative wuschel homeobox protein [Zea mays]
gi|159232346|emb|CAM32346.1| putative wuschel homeobox protein [Zea mays]
gi|194702210|gb|ACF85189.1| unknown [Zea mays]
gi|413942154|gb|AFW74803.1| putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 258
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
VA+GS RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+
Sbjct: 13 VAAGST------RWCPTPEQLMILEDMYRGGLRTPNASQIQQITAHLACYGRIEGKNVFY 66
Query: 72 WFQNRRARLKRK 83
WFQN +AR ++K
Sbjct: 67 WFQNHKARDRQK 78
>gi|148907916|gb|ABR17078.1| unknown [Picea sitchensis]
Length = 481
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
A SQ + RW PTP Q++ILE Y TP ++I+ +TA+L ++G+I NV+
Sbjct: 123 CAVQSQPTASGTRWNPTPDQIRILEMFYKGGMRTPNAEQIEHITAQLRQYGKIEGKNVFY 182
Query: 72 WFQNRRARLKRKQ 84
WFQN +AR ++KQ
Sbjct: 183 WFQNHKARERQKQ 195
>gi|297822575|ref|XP_002879170.1| hypothetical protein ARALYDRAFT_481772 [Arabidopsis lyrata subsp.
lyrata]
gi|297325009|gb|EFH55429.1| hypothetical protein ARALYDRAFT_481772 [Arabidopsis lyrata subsp.
lyrata]
Length = 242
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63
Query: 80 LKRK 83
++K
Sbjct: 64 DRQK 67
>gi|15226914|ref|NP_180429.1| WUSCHEL-related homeobox 3 [Arabidopsis thaliana]
gi|61217434|sp|Q9SIB4.1|WOX3_ARATH RecName: Full=WUSCHEL-related homeobox 3; AltName: Full=Protein
PRESSED FLOWER
gi|4580396|gb|AAD24374.1| putative homeodomain transcription factor [Arabidopsis thaliana]
gi|17907768|dbj|BAB79446.1| PRESSED FLOWER [Arabidopsis thaliana]
gi|37954308|gb|AAP37135.1| PRS/WOX3 protein [Arabidopsis thaliana]
gi|91806283|gb|ABE65869.1| homeobox-leucine zipper transcription factor [Arabidopsis
thaliana]
gi|330253055|gb|AEC08149.1| WUSCHEL-related homeobox 3 [Arabidopsis thaliana]
Length = 244
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63
Query: 80 LKRK 83
++K
Sbjct: 64 DRQK 67
>gi|116831125|gb|ABK28517.1| unknown [Arabidopsis thaliana]
Length = 245
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63
Query: 80 LKRK 83
++K
Sbjct: 64 DRQK 67
>gi|297817740|ref|XP_002876753.1| HOS9/PFS2 [Arabidopsis lyrata subsp. lyrata]
gi|297322591|gb|EFH53012.1| HOS9/PFS2 [Arabidopsis lyrata subsp. lyrata]
Length = 275
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA- 78
TA RW PTP Q+ +LE +Y TP + IQ + ++L K+G+I NV+ WFQN +A
Sbjct: 57 TATSRWNPTPEQITMLEELYMSGTRTPTTEHIQQIASKLRKYGRIEGKNVFYWFQNHKAR 116
Query: 79 -RLKRKQS-GVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDE 125
RLKR++ G N + + + R +S SL + P P+ E
Sbjct: 117 ERLKRRRCEGGALNKPHKDVKDSSSGGYRVDQTKSCPSLPHTNPQPQHE 165
>gi|414584944|tpg|DAA35515.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 320
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 23 QRWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RWTPTP Q++IL+ +Y C +P ++IQ +TA L +HG+I NV+ WFQN +AR +
Sbjct: 39 SRWTPTPEQIRILKELYYGCGIRSPNSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARER 98
Query: 82 RKQ 84
+K+
Sbjct: 99 QKR 101
>gi|342672239|gb|AEL30892.1| STENOFOLIA [Medicago truncatula]
Length = 358
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 16 SQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
S + RW PTP QL+ LE +Y TP ++IQ +TA+L K G+I NV+ WFQN
Sbjct: 88 SAAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRKFGKIEGKNVFYWFQN 147
Query: 76 RRARLKRKQ 84
+AR ++K+
Sbjct: 148 HKARERQKR 156
>gi|357521637|ref|XP_003631107.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355525129|gb|AET05583.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 358
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 16 SQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
S + RW PTP QL+ LE +Y TP ++IQ +TA+L K G+I NV+ WFQN
Sbjct: 88 SAAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRKFGKIEGKNVFYWFQN 147
Query: 76 RRARLKRKQ 84
+AR ++K+
Sbjct: 148 HKARERQKR 156
>gi|159232376|emb|CAM32361.1| putative wuschel homeobox protein [Brachypodium distachyon]
Length = 41
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
Query: 33 QILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
QILE ++D+ GTP KQKI+D+TAEL++HGQI ETNVYNWF
Sbjct: 1 QILESIFDQGNGTPSKQKIKDITAELSQHGQI-ETNVYNWF 40
>gi|116811086|emb|CAJ84151.1| WOX4 protein [Populus trichocarpa]
Length = 65
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+D+TA+L+++G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 64
Query: 84 Q 84
Q
Sbjct: 65 Q 65
>gi|224555007|gb|ACN56439.1| WUSCHEL-related homeobox-containing protein 4 [Ocotea
catharinensis]
Length = 213
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+D+TA+L+++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 138
Query: 84 Q 84
Q
Sbjct: 139 Q 139
>gi|116811080|emb|CAJ84148.1| WOX1A protein [Populus trichocarpa]
Length = 65
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP +IQD+TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTPEQLRTLEELYRRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQK 64
Query: 84 Q 84
+
Sbjct: 65 R 65
>gi|224063491|ref|XP_002301170.1| predicted protein [Populus trichocarpa]
gi|222842896|gb|EEE80443.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+D+TA+L+++G+I NV+ WFQN +AR ++K
Sbjct: 79 RWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKNVFYWFQNHKARERQK 138
Query: 84 Q 84
Q
Sbjct: 139 Q 139
>gi|449533202|ref|XP_004173565.1| PREDICTED: WUSCHEL-related homeobox 1-like, partial [Cucumis
sativus]
Length = 193
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL++LE +Y TP +IQ +T++L ++G+I NV+ WFQN +AR ++K
Sbjct: 81 RWNPTPEQLRVLEELYRRGTRTPSADQIQHITSQLRRYGKIEGKNVFYWFQNHKARERQK 140
Query: 84 QSGVVPNNAESEAETVT 100
+ + ++A + A+ T
Sbjct: 141 RRRQMESSAITTADHST 157
>gi|297789746|ref|XP_002862807.1| WOX1 protein [Arabidopsis lyrata subsp. lyrata]
gi|297308541|gb|EFH39065.1| WOX1 protein [Arabidopsis lyrata subsp. lyrata]
Length = 348
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 84 Q 84
+
Sbjct: 136 R 136
>gi|402575786|gb|AFQ69083.1| NARROW ORGAN 1 [Lotus japonicus]
Length = 368
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 27/122 (22%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP ++IQ +TA+L + G+I NV+ WFQN +AR ++K
Sbjct: 87 RWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQK 146
Query: 84 QSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRD-EDIYPQSPDLGIDQMIGK 142
+ ESEAE PPRD E + DLG + + +
Sbjct: 147 RR----RQMESEAEG----------------------PPRDFESSHHDKKDLGASRTVFE 180
Query: 143 ME 144
+E
Sbjct: 181 VE 182
>gi|356531158|ref|XP_003534145.1| PREDICTED: WUSCHEL-related homeobox 1-like [Glycine max]
Length = 364
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
+G+ + RW P+P QL+ LE +Y TP ++IQ +TA+L + G I NV+ WF
Sbjct: 67 NGATPVVVSSRWNPSPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGNIEGKNVFYWF 126
Query: 74 QNRRARLKRKQSGVVPNNAE 93
QN +AR ++K+ + ++AE
Sbjct: 127 QNHKARERQKRRRQMESDAE 146
>gi|380848568|emb|CCA30604.1| putative transcription factor [Selaginella moellendorffii]
Length = 212
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R RW PTP Q+ ILE++++ P + I +T L +G + E NV+ WFQNRRAR K
Sbjct: 127 RPRWKPTPVQISILEYIFENSDLLPGDKDITIITDGLRLYGPVEEVNVFYWFQNRRARAK 186
Query: 82 R 82
R
Sbjct: 187 R 187
>gi|256274567|gb|ACU68503.1| WOX3 protein [Petunia x hybrida]
Length = 222
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
+K+T RW+PTP QL +LE +Y + P +IQ++TA L+ +G+I NV+ WFQN
Sbjct: 7 EKITRPTRWSPTPEQLMLLEEMYRKGLRNPNATQIQNITAHLSCYGKIEGKNVFYWFQNH 66
Query: 77 RARLKRK 83
+AR ++K
Sbjct: 67 KARDRQK 73
>gi|116811082|emb|CAJ84149.1| WOX1B protein [Populus trichocarpa]
Length = 65
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP +IQD+TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTPEQLRTLEDLYRRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQK 64
Query: 84 Q 84
+
Sbjct: 65 R 65
>gi|297834708|ref|XP_002885236.1| WOX1 protein [Arabidopsis lyrata subsp. lyrata]
gi|297331076|gb|EFH61495.1| WOX1 protein [Arabidopsis lyrata subsp. lyrata]
Length = 348
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 84 Q 84
+
Sbjct: 136 R 136
>gi|297734317|emb|CBI15564.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP ++IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 78 RWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQK 137
Query: 84 -QSGVVPNNAESEAETVTHAES 104
+ + P+ + E+ ES
Sbjct: 138 RRRQLEPDEQNRDVESTERKES 159
>gi|242077542|ref|XP_002448707.1| hypothetical protein SORBIDRAFT_06g031880 [Sorghum bicolor]
gi|241939890|gb|EES13035.1| hypothetical protein SORBIDRAFT_06g031880 [Sorghum bicolor]
Length = 327
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 23 QRWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RWTPTP Q++IL+ Y C +P ++IQ +TA L +HG+I NV+ WFQN +AR +
Sbjct: 43 SRWTPTPEQIRILKEFYYGCGIRSPNSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARER 102
Query: 82 RKQ 84
+K+
Sbjct: 103 QKR 105
>gi|37909316|gb|AAP37133.1| WOX1 protein [Arabidopsis thaliana]
Length = 349
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 84 Q 84
+
Sbjct: 136 R 136
>gi|145338658|ref|NP_188428.3| WUSCHEL-related homeobox 1 [Arabidopsis thaliana]
gi|61217290|sp|Q6X7K0.2|WOX1_ARATH RecName: Full=WUSCHEL-related homeobox 1; AltName: Full=PFS2-like
protein
gi|9294502|dbj|BAB02721.1| homeodomain transcription factor-like protein [Arabidopsis
thaliana]
gi|332642513|gb|AEE76034.1| WUSCHEL-related homeobox 1 [Arabidopsis thaliana]
Length = 350
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 84 Q 84
+
Sbjct: 136 R 136
>gi|302190100|dbj|BAJ14109.1| PRESSED FLOWER b [Juncus prismatocarpus subsp. leschenaultii]
Length = 191
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PTP QL ILE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR
Sbjct: 4 TRTTRWCPTPEQLMILEEMYRNGLQTPNAPQIQQITAHLSCYGRIEGKNVFYWFQNHKAR 63
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPP 122
++K + + + A++ H + + + + S PPP
Sbjct: 64 DRQKMRRKLHSMSVLYAQSAAHYHNSVHH-QFVDQRFVSPPPP 105
>gi|225435146|ref|XP_002281707.1| PREDICTED: WUSCHEL-related homeobox 3 [Vitis vinifera]
gi|147789069|emb|CAN60351.1| hypothetical protein VITISV_005805 [Vitis vinifera]
Length = 208
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR- 79
A RW PTP QL ILE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR
Sbjct: 5 ASSRWCPTPEQLMILEEMYRGGVRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKARD 64
Query: 80 ---LKRKQS 85
L+RK S
Sbjct: 65 RQKLRRKLS 73
>gi|449439705|ref|XP_004137626.1| PREDICTED: WUSCHEL-related homeobox 1-like [Cucumis sativus]
Length = 334
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL++LE +Y TP +IQ +T++L ++G+I NV+ WFQN +AR ++K
Sbjct: 81 RWNPTPEQLRVLEELYRRGTRTPSADQIQHITSQLRRYGKIEGKNVFYWFQNHKARERQK 140
Query: 84 QSGVVPNNAESEAETVT 100
+ + ++A + A+ T
Sbjct: 141 RRRQMESSAITTADHST 157
>gi|359491505|ref|XP_002278336.2| PREDICTED: WUSCHEL-related homeobox 1 [Vitis vinifera]
Length = 351
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP ++IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 82 RWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQK 141
Query: 84 -QSGVVPNNAESEAETVTHAES 104
+ + P+ + E+ ES
Sbjct: 142 RRRQLEPDEQNRDVESTERKES 163
>gi|116811066|emb|CAJ84141.1| WOX2 protein [Oryza sativa]
Length = 65
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
A RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +AR
Sbjct: 2 ANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQ 61
Query: 81 KRKQ 84
++KQ
Sbjct: 62 RQKQ 65
>gi|224118664|ref|XP_002317877.1| predicted protein [Populus trichocarpa]
gi|222858550|gb|EEE96097.1| predicted protein [Populus trichocarpa]
Length = 63
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP +IQD+TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 1 RWNPTPEQLRTLEELYRRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQK 60
Query: 84 Q 84
+
Sbjct: 61 R 61
>gi|147818819|emb|CAN59842.1| hypothetical protein VITISV_030358 [Vitis vinifera]
Length = 347
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP ++IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 78 RWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQK 137
Query: 84 -QSGVVPNNAESEAETVTHAES 104
+ + P+ + E+ ES
Sbjct: 138 RRRQLEPDEQNRDVESTERKES 159
>gi|297746166|emb|CBI16222.3| unnamed protein product [Vitis vinifera]
Length = 132
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
A RW PTP QL ILE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR
Sbjct: 4 AASSRWCPTPEQLMILEEMYRGGVRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKAR 63
Query: 80 ----LKRKQS 85
L+RK S
Sbjct: 64 DRQKLRRKLS 73
>gi|255577271|ref|XP_002529517.1| hypothetical protein RCOM_1715600 [Ricinus communis]
gi|223531001|gb|EEF32855.1| hypothetical protein RCOM_1715600 [Ricinus communis]
Length = 53
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYD 40
R+GN Y DP + SG K+TARQRWTPTP QLQILE ++D
Sbjct: 15 RLGNLYCDPLMTSGRHKITARQRWTPTPVQLQILERIFD 53
>gi|224135545|ref|XP_002322100.1| predicted protein [Populus trichocarpa]
gi|222869096|gb|EEF06227.1| predicted protein [Populus trichocarpa]
Length = 63
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP +IQD+TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 1 RWNPTPEQLRTLEDLYRRGTRTPSTDQIQDITAQLRRYGRIEGKNVFYWFQNHKARERQK 60
Query: 84 Q 84
+
Sbjct: 61 R 61
>gi|402575784|gb|AFQ69082.1| LATHYROIDES [Pisum sativum]
Length = 373
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 3 MGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHG 62
M NP V S RW PTP QL+ LE +Y TP ++IQ +TA+L + G
Sbjct: 78 MNNPAAAAVVVSS--------RWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFG 129
Query: 63 QISETNVYNWFQNRRARLKRKQSGVVPNNAE 93
+I NV+ WFQN +AR ++K+ + + AE
Sbjct: 130 KIEGKNVFYWFQNHKARERQKRRRQMESAAE 160
>gi|225458680|ref|XP_002284927.1| PREDICTED: WUSCHEL-related homeobox 4 [Vitis vinifera]
gi|147773642|emb|CAN76463.1| hypothetical protein VITISV_017034 [Vitis vinifera]
gi|302142285|emb|CBI19488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +TA+L K+G+I NV+ WFQN +AR ++K
Sbjct: 78 RWNPTQEQIGILEMLYKSGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQK 137
Query: 84 Q 84
Q
Sbjct: 138 Q 138
>gi|89330203|emb|CAJ84160.1| WOX4 protein [Zea mays]
Length = 65
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+P Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQNR+AR ++K
Sbjct: 5 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNRKARERQK 64
Query: 84 Q 84
Q
Sbjct: 65 Q 65
>gi|302190106|dbj|BAJ14112.1| PRESSED FLOWER b [Juncus wallichianus]
Length = 190
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PTP QL ILE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR
Sbjct: 4 TRTTRWCPTPEQLMILEEMYRNGLRTPNAPQIQQITAHLSCYGRIEGKNVFYWFQNHKAR 63
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
++K + + + A++ H + + Q PP
Sbjct: 64 DRQKMRRKLHSMSVLYAQSAAHYHNLVHHQFVDQGFVSPPPP 105
>gi|413950144|gb|AFW82793.1| putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 220
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL +LE Y TP +IQ +TA LA +G+I NV+ WFQN +AR ++K
Sbjct: 16 RWCPTPEQLMVLEETYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYWFQNHKARDRQK 75
>gi|302808622|ref|XP_002986005.1| hypothetical protein SELMODRAFT_123325 [Selaginella
moellendorffii]
gi|300146153|gb|EFJ12824.1| hypothetical protein SELMODRAFT_123325 [Selaginella
moellendorffii]
Length = 86
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R RW PTP Q+ ILE++++ P + I +T L +G + E NV+ WFQNRRAR K
Sbjct: 1 RPRWKPTPVQISILEYIFENSDLLPGDKDITIITDGLRLYGPVEEVNVFYWFQNRRARAK 60
Query: 82 R 82
R
Sbjct: 61 R 61
>gi|255584160|ref|XP_002532820.1| hypothetical protein RCOM_1264090 [Ricinus communis]
gi|223527440|gb|EEF29577.1| hypothetical protein RCOM_1264090 [Ricinus communis]
Length = 163
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
A RW PTP QL ILE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR
Sbjct: 4 AASSRWCPTPEQLMILEELYRNGIRTPNASQIQRITAHLSLYGKIEGKNVFYWFQNHKAR 63
Query: 80 LKRK 83
++K
Sbjct: 64 DRQK 67
>gi|302800255|ref|XP_002981885.1| hypothetical protein SELMODRAFT_115439 [Selaginella
moellendorffii]
gi|300150327|gb|EFJ16978.1| hypothetical protein SELMODRAFT_115439 [Selaginella
moellendorffii]
Length = 86
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R RW PTP Q+ ILE++++ P + I +T L +G + E NV+ WFQNRRAR K
Sbjct: 1 RPRWKPTPVQISILEYIFENSDLLPGDKDITIITDGLRLYGPVEEVNVFYWFQNRRARAK 60
Query: 82 R 82
R
Sbjct: 61 R 61
>gi|356512974|ref|XP_003525189.1| PREDICTED: WUSCHEL-related homeobox 1-like [Glycine max]
Length = 359
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
+ RW PTP QL+ LE +Y TP ++IQ +TA+L + G+I NV+ WFQN +A
Sbjct: 78 VVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKA 137
Query: 79 RLKRKQSGVVPNNAE 93
R ++K+ + + AE
Sbjct: 138 RERQKRRRQMESAAE 152
>gi|302190098|dbj|BAJ14108.1| PRESSED FLOWER a [Juncus prismatocarpus subsp. leschenaultii]
Length = 199
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PTP Q+ ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 TPSTRWCPTPEQVMILEEMYRSGMRTPNAAQIQQITAHLAFYGKIEGKNVFYWFQNHKAR 63
Query: 80 LKRK 83
++K
Sbjct: 64 ERQK 67
>gi|255570140|ref|XP_002526032.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223534679|gb|EEF36372.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 316
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
Q L RW PTP QL LE +Y TP ++IQ + ++L + G+I NV+ WFQN
Sbjct: 69 QSLMGSSRWNPTPEQLLALEEMYRRGTKTPTAEQIQQIASQLRRFGKIEGKNVFYWFQNH 128
Query: 77 RARLKRKQSGVVPNNAES 94
+AR ++K+ + +N +S
Sbjct: 129 KARERQKRRREMESNCKS 146
>gi|356524686|ref|XP_003530959.1| PREDICTED: WUSCHEL-related homeobox 1-like isoform 2 [Glycine max]
Length = 365
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
+ RW PTP QL+ LE +Y TP ++IQ +TA+L + G+I NV+ WFQN +A
Sbjct: 78 VVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKA 137
Query: 79 RLKRKQ 84
R ++K+
Sbjct: 138 RERQKR 143
>gi|356524684|ref|XP_003530958.1| PREDICTED: WUSCHEL-related homeobox 1-like isoform 1 [Glycine max]
Length = 364
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
+ RW PTP QL+ LE +Y TP ++IQ +TA+L + G+I NV+ WFQN +A
Sbjct: 78 VVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKA 137
Query: 79 RLKRKQ 84
R ++K+
Sbjct: 138 RERQKR 143
>gi|350536525|ref|NP_001234251.1| WOX4 [Solanum lycopersicum]
gi|214011869|gb|ACJ61689.1| WOX4 [Solanum lycopersicum]
gi|214011873|gb|ACJ61691.1| WOX4 [Solanum lycopersicum]
Length = 242
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +TA+L K+G+I NV+ WFQN +AR ++K
Sbjct: 98 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQK 157
Query: 84 Q 84
Q
Sbjct: 158 Q 158
>gi|162460479|ref|NP_001105961.1| WUS2 protein [Zea mays]
gi|116811058|emb|CAJ84137.1| WUS2 protein [Zea mays]
gi|413919842|gb|AFW59774.1| putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 325
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPTP Q+++L+ +Y C +P ++IQ +TA L +HG+I NV+ WFQN +AR ++
Sbjct: 31 RWTPTPEQIRMLKELYYGCGIRSPSSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQ 90
Query: 83 KQ 84
K+
Sbjct: 91 KR 92
>gi|342672245|gb|AEL30895.1| STENOFOLIA-like 2 protein [Medicago sativa]
Length = 383
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 16 SQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
S + RW PTP QL+ LE +Y TP ++IQ +TA+L + G+I NV+ WFQN
Sbjct: 88 SAAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLREFGKIEGKNVFYWFQN 147
Query: 76 RRARLKRKQ 84
+AR ++K+
Sbjct: 148 HKARERQKR 156
>gi|356546191|ref|XP_003541514.1| PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max]
Length = 389
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 10 PFVASGSQKLTA--RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
P+ SG + T + RW P P Q++ILE +++ P + +I+ + +L ++GQ+ +
Sbjct: 41 PYANSGGDERTPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDA 100
Query: 68 NVYNWFQNRRARLKRK----QSGVVPNNAESEAETVTHAES 104
NV+ WFQNR++R K K Q+ NNAE++ + A S
Sbjct: 101 NVFYWFQNRKSRSKHKLRHFQNTKNQNNAEAQQQHRVDASS 141
>gi|302190104|dbj|BAJ14111.1| PRESSED FLOWER a [Juncus wallichianus]
Length = 199
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PTP Q+ ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 TPSTRWCPTPEQVMILEEMYRSGMRTPNAAQIQQITAHLAFYGKIEGKNVFYWFQNHKAR 63
Query: 80 LKRK 83
++K
Sbjct: 64 ERQK 67
>gi|388492044|gb|AFK34088.1| unknown [Lotus japonicus]
Length = 227
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +TA+L+K+G+I NV+ WFQN +AR ++K
Sbjct: 94 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQK 153
Query: 84 Q 84
Q
Sbjct: 154 Q 154
>gi|342672243|gb|AEL30894.1| STENOFOLIA-like 1 protein [Medicago sativa]
Length = 353
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL+ LE +Y TP +IQ +TA+L K G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPTPEQLRALEELYRRGTRTPSAVQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQK 151
Query: 84 QSGVVPNNAE 93
+ + + AE
Sbjct: 152 RRRQMESAAE 161
>gi|294818270|gb|ADF42580.1| putative wuschel homeobox protein WOX8/9 [Picea abies]
Length = 274
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P QL+ILE V++ P + +I+ + A+L + GQ+ + NV+ WFQNR++R K++
Sbjct: 56 RWNPKPEQLRILESVFNSGMVNPPRDEIKRIRAQLQEFGQVGDANVFYWFQNRKSRTKQR 115
Query: 84 Q 84
Q
Sbjct: 116 Q 116
>gi|255630905|gb|ACU15815.1| unknown [Glycine max]
Length = 231
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +TA+L+K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQK 151
Query: 84 QSGVVPNNAESEAETVT 100
Q A S T+T
Sbjct: 152 QKRNNLGLAHSPRTTLT 168
>gi|356552220|ref|XP_003544467.1| PREDICTED: WUSCHEL-related homeobox 4 [Glycine max]
Length = 231
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +TA+L+K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQK 151
Query: 84 QSGVVPNNAESEAETVT 100
Q A S T+T
Sbjct: 152 QKRNNLGLAHSPRTTLT 168
>gi|297794657|ref|XP_002865213.1| hypothetical protein ARALYDRAFT_916845 [Arabidopsis lyrata subsp.
lyrata]
gi|297311048|gb|EFH41472.1| hypothetical protein ARALYDRAFT_916845 [Arabidopsis lyrata subsp.
lyrata]
Length = 328
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K
Sbjct: 52 KPRWNPKPEQIRILESIFNSGTVNPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 111
Query: 82 RK 83
K
Sbjct: 112 HK 113
>gi|143023740|gb|ABO93067.1| SISTER OF EVERGREEN [Petunia x hybrida]
Length = 391
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K
Sbjct: 54 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSK 113
Query: 82 RKQ 84
KQ
Sbjct: 114 HKQ 116
>gi|116811064|emb|CAJ84140.1| NS protein [Oryza sativa]
Length = 65
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR +++
Sbjct: 5 RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 64
>gi|229359437|emb|CAT02903.2| putative wuschel homeobox protein WOX3A [Ginkgo biloba]
Length = 215
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
A RWTPTP QL +LE +Y P ++IQ TA L+ +G+I N++ WFQNR+AR
Sbjct: 36 ASTRWTPTPEQLMLLEDMYTNGIRNPTGEQIQQFTAHLSLYGKIEGRNLFYWFQNRKARD 95
Query: 81 KRK 83
+ K
Sbjct: 96 RLK 98
>gi|229359355|emb|CAT02936.1| putative wuschel homeobox protein WOX3 [Pinus sylvestris]
Length = 147
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 5 ATTRWNPTPEQLVILEEMYRGGIRTPNADQIQQITAHLALYGKIEGKNVFYWFQNHKARD 64
Query: 81 KRK 83
++K
Sbjct: 65 RQK 67
>gi|356562265|ref|XP_003549392.1| PREDICTED: WUSCHEL-related homeobox 4-like [Glycine max]
Length = 242
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +TA+L+K+G+I NV+ WFQN +AR ++K
Sbjct: 98 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQK 157
Query: 84 Q 84
Q
Sbjct: 158 Q 158
>gi|159232348|emb|CAM32347.1| putative wuschel homeobox protein [Zea mays]
Length = 245
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+P Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQNR+AR ++K
Sbjct: 96 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNRKARERQK 155
Query: 84 Q 84
Q
Sbjct: 156 Q 156
>gi|79530393|ref|NP_199410.2| WUSCHEL-related homeobox 8 [Arabidopsis thaliana]
gi|61217284|sp|Q6X7J5.1|WOX8_ARATH RecName: Full=WUSCHEL-related homeobox 8
gi|37955180|gb|AAP37138.1| WOX8 protein [Arabidopsis thaliana]
gi|332007940|gb|AED95323.1| WUSCHEL-related homeobox 8 [Arabidopsis thaliana]
Length = 325
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 82 RK 83
K
Sbjct: 113 HK 114
>gi|356519629|ref|XP_003528473.1| PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max]
Length = 415
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 13 ASGSQKLTA--RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
ASG ++ T + RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+
Sbjct: 44 ASGGEERTPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVF 103
Query: 71 NWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
WFQNR++R K K + ++ +AE+++Q SL + PP
Sbjct: 104 YWFQNRKSRSKHKLR-----HFQNSMNQNHNAEAQQQQKVDASSLSQTTPP 149
>gi|207083717|gb|ACI23250.1| COMPOUND INFLORESCENCE [Solanum lycopersicum]
Length = 249
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 24 RWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHK 83
Query: 84 Q 84
Q
Sbjct: 84 Q 84
>gi|350538129|ref|NP_001234072.1| compound inflorescence [Solanum lycopersicum]
gi|207083711|gb|ACI23247.1| COMPOUND INFLORESCENCE [Solanum lycopersicum]
gi|207083713|gb|ACI23248.1| COMPOUND INFLORESCENCE [Solanum lycopersicum]
Length = 358
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K
Sbjct: 49 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSK 108
Query: 82 RKQ 84
KQ
Sbjct: 109 HKQ 111
>gi|357129989|ref|XP_003566641.1| PREDICTED: uncharacterized protein LOC100842843 [Brachypodium
distachyon]
Length = 275
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PT QL +LE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 16 TGTTRWCPTAEQLMVLEEMYRGGLRTPNASQIQQITAHLAHYGRIEGKNVFYWFQNHKAR 75
Query: 80 LKRK 83
++K
Sbjct: 76 DRQK 79
>gi|207083719|gb|ACI23251.1| COMPOUND INFLORESCENCE [Solanum lycopersicum]
Length = 251
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 26 RWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHK 85
Query: 84 Q 84
Q
Sbjct: 86 Q 86
>gi|255582625|ref|XP_002532093.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223528227|gb|EEF30283.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 401
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 16 SQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
+Q + RW PTP QL+ LE +Y TP ++I+ +T +L ++G+I NV+ WFQN
Sbjct: 76 TQPVVVSSRWNPTPEQLRALEELYRRGTRTPTTEQIEHITKQLRRYGKIEGKNVFYWFQN 135
Query: 76 RRARLKRKQ 84
+AR ++K+
Sbjct: 136 HKARERQKR 144
>gi|255538238|ref|XP_002510184.1| transcription factor, putative [Ricinus communis]
gi|223550885|gb|EEF52371.1| transcription factor, putative [Ricinus communis]
Length = 228
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +TA+L+++G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSRYGKIEGKNVFYWFQNHKARERQK 151
Query: 84 Q 84
Q
Sbjct: 152 Q 152
>gi|145353257|ref|XP_001420936.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581172|gb|ABO99229.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
V G K RW+ TP Q +ILE ++ + P + ++ ++T L +HG I E NVYN
Sbjct: 109 VGRGEDKGVRGPRWSGTPDQYKILEDLFLAGEQPPVRARLTEITKRLQEHGPIQEHNVYN 168
Query: 72 WFQNRRARLKRK 83
WFQNRR+R K++
Sbjct: 169 WFQNRRSREKKR 180
>gi|297852296|ref|XP_002894029.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297339871|gb|EFH70288.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 251
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T++L K+G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITSQLGKYGKIEGKNVFYWFQNHKARERQK 149
Query: 84 Q 84
Q
Sbjct: 150 Q 150
>gi|356544586|ref|XP_003540730.1| PREDICTED: WUSCHEL-related homeobox 2-like [Glycine max]
Length = 256
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE++Y + TP ++IQ +TA L +G I NV+ WFQN +AR ++K
Sbjct: 34 RWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQK 93
Query: 84 Q 84
Q
Sbjct: 94 Q 94
>gi|307135854|gb|ADN33723.1| homeodomain transcription factor [Cucumis melo subsp. melo]
Length = 225
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
+ +G + RW PT Q+ ILE +Y TP Q+I+ +TA+L +G+I NV+
Sbjct: 82 LQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 141
Query: 72 WFQNRRARLKRKQ 84
WFQN +AR ++KQ
Sbjct: 142 WFQNHKARERQKQ 154
>gi|449450241|ref|XP_004142872.1| PREDICTED: WUSCHEL-related homeobox 4-like [Cucumis sativus]
Length = 227
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
+ +G + RW PT Q+ ILE +Y TP Q+I+ +TA+L +G+I NV+
Sbjct: 84 LQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFY 143
Query: 72 WFQNRRARLKRKQ 84
WFQN +AR ++KQ
Sbjct: 144 WFQNHKARERQKQ 156
>gi|75287598|sp|Q5W7C3.1|WOX2_ORYSJ RecName: Full=Putative WUSCHEL-related homeobox 2; AltName:
Full=OsWOX2
gi|55168346|gb|AAV44211.1| hypothetical protein [Oryza sativa Japonica Group]
gi|159232362|emb|CAM32354.1| putative wuschel homeobox protein [Oryza sativa]
Length = 286
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
>gi|160221295|sp|A2XZR3.1|WOX2_ORYSI RecName: Full=Putative WUSCHEL-related homeobox 2; AltName:
Full=OsWOX2
gi|125550614|gb|EAY96323.1| hypothetical protein OsI_18225 [Oryza sativa Indica Group]
Length = 286
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
>gi|9757718|dbj|BAB08243.1| unnamed protein product [Arabidopsis thaliana]
Length = 253
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 82 RK 83
K
Sbjct: 113 HK 114
>gi|143023715|gb|ABO93066.1| EVERGREEN [Petunia x hybrida]
Length = 345
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+QRW P P Q++ILE +++ P + +I+ + +L + GQ+ + NV+ WFQNR++R K
Sbjct: 57 KQRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRIKLQEFGQVGDANVFYWFQNRKSRSK 116
Query: 82 RKQ 84
KQ
Sbjct: 117 HKQ 119
>gi|207083715|gb|ACI23249.1| mutant compound inflorescence [Solanum lycopersicum]
Length = 251
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 26 RWNPRPEQIRILEAIFNSDMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHK 85
Query: 84 Q 84
Q
Sbjct: 86 Q 86
>gi|159232344|emb|CAM32345.1| putative wuschel homeobox protein [Zea mays]
gi|194695860|gb|ACF82014.1| unknown [Zea mays]
gi|195608700|gb|ACG26180.1| homeobox domain containing protein [Zea mays]
gi|414879775|tpg|DAA56906.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 324
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE +Y+ TP ++IQ +T L +HG I NV+ WFQN +AR +++
Sbjct: 41 RWNPTKEQVAVLEGLYEHGLRTPSAEQIQQITGRLREHGAIEGKNVFYWFQNHKARQRQR 100
Query: 84 Q 84
Q
Sbjct: 101 Q 101
>gi|225443552|ref|XP_002273188.1| PREDICTED: WUSCHEL-related homeobox 9-like [Vitis vinifera]
Length = 379
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + A+L + GQ+ + NV+ WFQNR++R K K
Sbjct: 57 RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEFGQVGDANVFYWFQNRKSRSKHK 116
Query: 84 Q 84
Q
Sbjct: 117 Q 117
>gi|297740453|emb|CBI30635.3| unnamed protein product [Vitis vinifera]
Length = 464
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I+ + A+L + GQ+ + NV+ WFQNR++R K
Sbjct: 55 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEFGQVGDANVFYWFQNRKSRSK 114
Query: 82 RKQ 84
KQ
Sbjct: 115 HKQ 117
>gi|357446821|ref|XP_003593686.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355482734|gb|AES63937.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 457
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 55 RWNPKPEQIRILEAIFNSGMVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
>gi|297826867|ref|XP_002881316.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327155|gb|EFH57575.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 55 RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
>gi|30685885|ref|NP_180944.2| WUSCHEL-related homeobox 9 [Arabidopsis thaliana]
gi|61217281|sp|Q6X7J4.1|WOX9_ARATH RecName: Full=WUSCHEL-related homeobox 9
gi|37955182|gb|AAP37139.1| WOX9 protein [Arabidopsis thaliana]
gi|330253808|gb|AEC08902.1| WUSCHEL-related homeobox 9 [Arabidopsis thaliana]
Length = 378
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 55 RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
>gi|359472618|ref|XP_002280774.2| PREDICTED: WUSCHEL-related homeobox 1-like [Vitis vinifera]
gi|297737692|emb|CBI26893.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QLQ LE +Y TP ++IQ + A+L G+I NV+ WFQN +AR ++K
Sbjct: 86 RWNPTPEQLQALEELYRRGTRTPTAEQIQQIAAQLRLFGKIEGKNVFYWFQNHKARERQK 145
Query: 84 QSGVVPNNAESE 95
+ + +++E +
Sbjct: 146 RRRELESDSEEQ 157
>gi|8099120|dbj|BAA90492.1| unnamed protein product [Oryza sativa]
Length = 275
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKAR 82
>gi|30693997|ref|NP_175145.2| WUSCHEL-related homeobox 4 [Arabidopsis thaliana]
gi|61217286|sp|Q6X7J9.1|WOX4_ARATH RecName: Full=WUSCHEL-related homeobox 4
gi|37933928|gb|AAP37134.1| WOX4 protein [Arabidopsis thaliana]
gi|38454110|gb|AAR20749.1| At1g46480 [Arabidopsis thaliana]
gi|38604018|gb|AAR24752.1| At1g46480 [Arabidopsis thaliana]
gi|214011871|gb|ACJ61690.1| WOX4 [Arabidopsis thaliana]
gi|225898014|dbj|BAH30339.1| hypothetical protein [Arabidopsis thaliana]
gi|332194006|gb|AEE32127.1| WUSCHEL-related homeobox 4 [Arabidopsis thaliana]
Length = 251
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 149
Query: 84 Q 84
Q
Sbjct: 150 Q 150
>gi|12321002|gb|AAG50620.1|AC083835_5 hypothetical protein [Arabidopsis thaliana]
Length = 249
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 88 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 147
Query: 84 Q 84
Q
Sbjct: 148 Q 148
>gi|351724163|ref|NP_001237560.1| uncharacterized protein LOC100499894 [Glycine max]
gi|255627481|gb|ACU14085.1| unknown [Glycine max]
Length = 224
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 85 RWNPTQEQIGILEMLYKGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQK 144
Query: 84 QS 85
Q+
Sbjct: 145 QN 146
>gi|229359345|emb|CAT02931.1| putative wuschel homeobox protein WOX3 [Gnetum gnemon]
Length = 178
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
A RW PT QL ILE +Y TP ++IQ +TA L+ +G+I NV+ WFQN +AR
Sbjct: 34 ATTRWNPTAEQLMILEELYRGGMRTPSAEQIQQITAHLSLYGKIEGKNVFYWFQNHKARD 93
Query: 81 KRK 83
++K
Sbjct: 94 RQK 96
>gi|83853807|gb|ABC47840.1| WOX4 protein [Glycine max]
Length = 188
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 49 RWNPTQEQIGILEMLYKGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQK 108
Query: 84 Q 84
Q
Sbjct: 109 Q 109
>gi|357437765|ref|XP_003589158.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355478206|gb|AES59409.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 236
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L+K+G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQK 149
Query: 84 Q 84
Q
Sbjct: 150 Q 150
>gi|449461025|ref|XP_004148244.1| PREDICTED: WUSCHEL-related homeobox 3-like [Cucumis sativus]
gi|449522913|ref|XP_004168470.1| PREDICTED: WUSCHEL-related homeobox 3-like [Cucumis sativus]
Length = 193
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP Q+ ILE +Y TP +IQ +T+ L+ +G+I NV+ WFQN +AR ++K
Sbjct: 10 RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQK 69
>gi|169667045|gb|ACA64095.1| WOX4 [Petunia x hybrida]
Length = 237
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 99 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITLQLGKYGKIEGKNVFYWFQNHKARERQK 158
Query: 84 Q 84
Q
Sbjct: 159 Q 159
>gi|224116368|ref|XP_002331965.1| predicted protein [Populus trichocarpa]
gi|222874742|gb|EEF11873.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K
Sbjct: 57 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK 116
Query: 82 RK 83
K
Sbjct: 117 HK 118
>gi|449518001|ref|XP_004166032.1| PREDICTED: WUSCHEL-related homeobox 6-like [Cucumis sativus]
Length = 334
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 10 PFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNV 69
P V S S RW PT QL+ILE +Y TP +IQ +TA+L + G+I NV
Sbjct: 85 PIVVSSS-------RWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNV 137
Query: 70 YNWFQNRRARLKRKQ 84
+ WFQN +AR ++K+
Sbjct: 138 FYWFQNHKARERQKR 152
>gi|2253582|gb|AAC69146.1| putative homeodomain transcription factor [Arabidopsis thaliana]
Length = 321
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 55 RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
>gi|388519193|gb|AFK47658.1| unknown [Medicago truncatula]
Length = 236
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L+K+G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQK 149
Query: 84 Q 84
Q
Sbjct: 150 Q 150
>gi|147801558|emb|CAN77014.1| hypothetical protein VITISV_036884 [Vitis vinifera]
Length = 411
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QLQ LE +Y TP ++IQ + A+L G+I NV+ WFQN +AR ++K
Sbjct: 160 RWNPTPEQLQALEELYRRGTRTPTAEQIQQIAAQLRLFGKIEGKNVFYWFQNHKARERQK 219
Query: 84 QSGVVPNNAESE 95
+ + +++E +
Sbjct: 220 RRRELESDSEEQ 231
>gi|242077408|ref|XP_002448640.1| hypothetical protein SORBIDRAFT_06g030700 [Sorghum bicolor]
gi|241939823|gb|EES12968.1| hypothetical protein SORBIDRAFT_06g030700 [Sorghum bicolor]
Length = 245
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+P Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 94 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNHKARERQK 153
Query: 84 Q 84
Q
Sbjct: 154 Q 154
>gi|194692878|gb|ACF80523.1| unknown [Zea mays]
Length = 180
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+P Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 32 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNHKARERQK 91
Query: 84 Q 84
Q
Sbjct: 92 Q 92
>gi|79540980|ref|NP_200742.2| WUSCHEL-related homeobox 2 [Arabidopsis thaliana]
gi|61217291|sp|Q6X7K1.1|WOX2_ARATH RecName: Full=WUSCHEL-related homeobox 2
gi|37909289|gb|AAP37132.1| WOX2 protein [Arabidopsis thaliana]
gi|225879134|dbj|BAH30637.1| hypothetical protein [Arabidopsis thaliana]
gi|332009790|gb|AED97173.1| WUSCHEL-related homeobox 2 [Arabidopsis thaliana]
Length = 260
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE++Y E TP +IQ +T L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 84 Q 84
Q
Sbjct: 74 Q 74
>gi|37909278|gb|AAP37131.1| WOX2 protein [Arabidopsis thaliana]
Length = 260
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE++Y E TP +IQ +T L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 84 Q 84
Q
Sbjct: 74 Q 74
>gi|255563018|ref|XP_002522513.1| hypothetical protein RCOM_1012260 [Ricinus communis]
gi|223538204|gb|EEF39813.1| hypothetical protein RCOM_1012260 [Ricinus communis]
Length = 390
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K
Sbjct: 57 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK 116
Query: 82 RK 83
K
Sbjct: 117 HK 118
>gi|195629504|gb|ACG36393.1| WUSCHEL-related homeobox 4 [Zea mays]
gi|238009026|gb|ACR35548.1| unknown [Zea mays]
Length = 250
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+P Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 102 RWNPSPDQIRVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNHKARERQK 161
Query: 84 Q 84
Q
Sbjct: 162 Q 162
>gi|363814326|ref|NP_001242805.1| uncharacterized protein LOC100804839 [Glycine max]
gi|255639317|gb|ACU19956.1| unknown [Glycine max]
Length = 403
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 58 RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 117
>gi|359807626|ref|NP_001241420.1| uncharacterized protein LOC100781015 [Glycine max]
gi|255640907|gb|ACU20736.1| unknown [Glycine max]
Length = 230
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 91 RWNPTQEQIGILEMLYKGGIRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQK 150
Query: 84 Q 84
Q
Sbjct: 151 Q 151
>gi|356548399|ref|XP_003542589.1| PREDICTED: WUSCHEL-related homeobox 9-like [Glycine max]
Length = 399
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 58 RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 117
>gi|449433782|ref|XP_004134676.1| PREDICTED: WUSCHEL-related homeobox 9-like [Cucumis sativus]
gi|449479259|ref|XP_004155551.1| PREDICTED: WUSCHEL-related homeobox 9-like [Cucumis sativus]
Length = 376
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K
Sbjct: 60 KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK 119
Query: 82 RK 83
K
Sbjct: 120 NK 121
>gi|162459869|ref|NP_001105242.1| WUSCHEL-related homeobox 3B [Zea mays]
gi|61217577|sp|Q6S3I3.1|WOX3B_MAIZE RecName: Full=WUSCHEL-related homeobox 3B; AltName: Full=Narrow
sheath protein 2
gi|39841615|gb|AAR31211.1| narrow sheath 2 [Zea mays]
gi|39841617|gb|AAR31212.1| narrow sheath 2 [Zea mays]
Length = 265
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|218764874|gb|ACL11801.1| WOX9-like protein [Phaseolus coccineus]
Length = 393
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 57 RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 116
>gi|195643474|gb|ACG41205.1| WUSCHEL-related homeobox 3B [Zea mays]
Length = 262
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|162459641|ref|NP_001105160.1| WUSCHEL-related homeobox 3A [Zea mays]
gi|61217580|sp|Q70UV1.1|WOX3A_MAIZE RecName: Full=WUSCHEL-related homeobox 3A; AltName: Full=Narrow
sheath protein 1
gi|46917143|emb|CAD60454.1| homeodomain transcription factor [Zea mays]
gi|223975617|gb|ACN31996.1| unknown [Zea mays]
gi|408690290|gb|AFU81605.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|414588559|tpg|DAA39130.1| TPA: narrow sheath1 [Zea mays]
Length = 262
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|242067485|ref|XP_002449019.1| hypothetical protein SORBIDRAFT_05g003490 [Sorghum bicolor]
gi|241934862|gb|EES08007.1| hypothetical protein SORBIDRAFT_05g003490 [Sorghum bicolor]
Length = 260
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|225434990|ref|XP_002281161.1| PREDICTED: WUSCHEL-related homeobox 2 [Vitis vinifera]
Length = 236
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
A RW PT Q+ +LE +Y + TP ++IQ +T L +G I NV+ WFQN +AR
Sbjct: 12 ASSRWNPTKEQISMLESLYMQGIRTPSAEQIQQITGRLKAYGHIEGKNVFYWFQNHKARQ 71
Query: 81 KRKQ 84
++KQ
Sbjct: 72 RQKQ 75
>gi|297796885|ref|XP_002866327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312162|gb|EFH42586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G+ + RW PT Q+ +LE++Y + TP +IQ +T L +G I NV+ WFQ
Sbjct: 5 GNVGTASSSRWNPTKDQITLLENLYKQGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQ 64
Query: 75 NRRARLKRKQ 84
N +AR ++KQ
Sbjct: 65 NHKARQRQKQ 74
>gi|4090200|emb|CAA09986.1| WUSCHEL protein [Arabidopsis thaliana]
Length = 291
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 14 SGSQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNV 69
SGS T RQ RWTPT Q++IL+ +Y + +P +IQ +TA L + G+I NV
Sbjct: 24 SGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNV 83
Query: 70 YNWFQNRRARLKRKQ 84
+ WFQN +AR ++K+
Sbjct: 84 FYWFQNHKARERQKK 98
>gi|89330201|emb|CAJ84159.1| WOX2A protein [Zea mays]
Length = 65
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
A RW PT Q+ +LE +Y+ TP ++IQ +T L +HG I NV+ WFQN +AR
Sbjct: 2 ANARWNPTKEQVAVLEGLYEHGLRTPSAEQIQQITGRLREHGAIEGKNVFYWFQNHKARQ 61
Query: 81 KRKQ 84
+++Q
Sbjct: 62 RQRQ 65
>gi|414588560|tpg|DAA39131.1| TPA: narrow sheath1 [Zea mays]
Length = 193
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|159232360|emb|CAM32353.1| putative narrow sheath protein [Oryza sativa]
Length = 234
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|229359317|emb|CAT02917.1| putative wuschel homeobox protein WOX13 [Acorus calamus]
Length = 46
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
TP QLQILE ++ + GT K+K++++T ELA+HG ++E+NVYNWF
Sbjct: 1 TPMQLQILEKLFIQGSGTRTKEKMKEITNELAQHGPVTESNVYNWF 46
>gi|357162384|ref|XP_003579392.1| PREDICTED: WUSCHEL-related homeobox 4-like [Brachypodium
distachyon]
Length = 236
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+ Q+++LE +Y TP +I+ +T EL +HG+I NV+ WFQN +AR ++K
Sbjct: 83 RWNPSTEQIKVLEALYRGGMRTPNAAQIERITEELGRHGRIEGKNVFYWFQNHKARERQK 142
Query: 84 Q 84
Q
Sbjct: 143 Q 143
>gi|357155614|ref|XP_003577178.1| PREDICTED: WUSCHEL-related homeobox 3B-like [Brachypodium
distachyon]
Length = 192
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|449482680|ref|XP_004156369.1| PREDICTED: LOW QUALITY PROTEIN: WUSCHEL-related homeobox 4-like
[Cucumis sativus]
Length = 227
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
+ +G + RW PT Q+ ILE +Y TP Q+I+ +TA+L +G+I N +
Sbjct: 84 LQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNXFY 143
Query: 72 WFQNRRARLKRKQ 84
WFQN +AR ++KQ
Sbjct: 144 WFQNHKARERQKQ 156
>gi|160221318|sp|Q0JKK6.2|WOX7_ORYSJ RecName: Full=WUSCHEL-related homeobox 7; AltName: Full=OsWOX7
gi|218188810|gb|EEC71237.1| hypothetical protein OsI_03193 [Oryza sativa Indica Group]
Length = 533
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 9 DPFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
PF + G +++ + RW P P Q++ILE +++ P + +I + +L ++GQ+ +
Sbjct: 53 SPFSSVGEERVPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDA 112
Query: 68 NVYNWFQNRRARLKRK 83
NV+ WFQNR++R K K
Sbjct: 113 NVFYWFQNRKSRSKNK 128
>gi|222619016|gb|EEE55148.1| hypothetical protein OsJ_02944 [Oryza sativa Japonica Group]
Length = 515
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 9 DPFVASGSQKL-TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
PF + G +++ + RW P P Q++ILE +++ P + +I + +L ++GQ+ +
Sbjct: 53 SPFSSVGEERVPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDA 112
Query: 68 NVYNWFQNRRARLKRK 83
NV+ WFQNR++R K K
Sbjct: 113 NVFYWFQNRKSRSKNK 128
>gi|115440959|ref|NP_001044759.1| Os01g0840300 [Oryza sativa Japonica Group]
gi|75301684|sp|Q8LR86.1|WOX5_ORYSJ RecName: Full=WUSCHEL-related homeobox 5; AltName: Full=OsWOX5;
AltName: Full=Protein WOX2
gi|160221297|sp|A2WWU7.1|WOX5_ORYSI RecName: Full=WUSCHEL-related homeobox 5; AltName: Full=OsWOX5;
AltName: Full=Protein WOX2
gi|21104626|dbj|BAB93218.1| putative WOX2 protein [Oryza sativa Japonica Group]
gi|113534290|dbj|BAF06673.1| Os01g0840300 [Oryza sativa Japonica Group]
gi|125528329|gb|EAY76443.1| hypothetical protein OsI_04377 [Oryza sativa Indica Group]
Length = 313
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +A
Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>gi|163838710|ref|NP_001106240.1| WUSCHEL-related homeobox 3B [Zea mays]
gi|159232380|emb|CAM33396.1| WUSCHEL-related homeobox 3B [Zea mays]
Length = 234
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
Q RW PTP QL +LE Y TP +IQ +TA LA +G+I NV+ FQN
Sbjct: 9 QAAAGSTRWCPTPEQLMVLEETYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYCFQNH 68
Query: 77 RARLKRK 83
+AR ++K
Sbjct: 69 KARDRQK 75
>gi|159232354|emb|CAM32350.1| putative wuschel homeobox protein [Zea mays]
Length = 402
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 14 SGSQKLTA--RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
SG +K T + RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+
Sbjct: 62 SGGEKRTPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQEYGQVGDANVFY 121
Query: 72 WFQNRRARLKRKQ 84
WFQNR++R K KQ
Sbjct: 122 WFQNRKSRSKNKQ 134
>gi|122249045|sp|Q33DK1.1|WOX3_ORYSJ RecName: Full=WUSCHEL-related homeobox 3; AltName: Full=OsNS;
AltName: Full=OsWOX3
gi|160221296|sp|A2ZH47.1|WOX3_ORYSI RecName: Full=WUSCHEL-related homeobox 3; AltName: Full=OsNS;
AltName: Full=OsWOX3
gi|77548299|gb|ABA91096.1| Homeobox domain containing protein [Oryza sativa Japonica Group]
gi|77552774|gb|ABA95570.1| Homeobox domain containing protein [Oryza sativa Japonica Group]
gi|81686872|dbj|BAE48302.1| OsWOX3 protein [Oryza sativa Japonica Group]
gi|125535443|gb|EAY81931.1| hypothetical protein OsI_37108 [Oryza sativa Indica Group]
gi|125575910|gb|EAZ17132.1| hypothetical protein OsJ_32633 [Oryza sativa Japonica Group]
Length = 203
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>gi|160221321|sp|A3B6V0.2|WOX12_ORYSJ RecName: Full=WUSCHEL-related homeobox 12; AltName: Full=OsWOX12;
AltName: Full=Protein WOX9C
gi|218197276|gb|EEC79703.1| hypothetical protein OsI_20994 [Oryza sativa Indica Group]
gi|222632571|gb|EEE64703.1| hypothetical protein OsJ_19558 [Oryza sativa Japonica Group]
Length = 515
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G++ + RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+ WFQ
Sbjct: 63 GTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQ 122
Query: 75 NRRARLKRK 83
NR++R K K
Sbjct: 123 NRKSRTKNK 131
>gi|50511480|gb|AAT77402.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 821
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G++ + RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+ WFQ
Sbjct: 63 GTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQ 122
Query: 75 NRRARLKRK 83
NR++R K K
Sbjct: 123 NRKSRTKNK 131
>gi|297724327|ref|NP_001174527.1| Os05g0564500 [Oryza sativa Japonica Group]
gi|255676577|dbj|BAH93255.1| Os05g0564500 [Oryza sativa Japonica Group]
Length = 476
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G++ + RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+ WFQ
Sbjct: 63 GTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQ 122
Query: 75 NRRARLKRK 83
NR++R K K
Sbjct: 123 NRKSRTKNK 131
>gi|124361149|gb|ABN09121.1| Homeodomain-related [Medicago truncatula]
Length = 432
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P +++I + +L + GQ+ + NV+ WFQNR++R K+K
Sbjct: 47 RWNPKPQQIRILEAIFNSGMVNPPREEITKIREQLQEFGQVGDANVFYWFQNRKSRSKQK 106
Query: 84 Q 84
+
Sbjct: 107 K 107
>gi|125572587|gb|EAZ14102.1| hypothetical protein OsJ_04026 [Oryza sativa Japonica Group]
Length = 309
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +A
Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>gi|357503259|ref|XP_003621918.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
gi|355496933|gb|AES78136.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
Length = 590
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P +++I + +L + GQ+ + NV+ WFQNR++R K+K
Sbjct: 47 RWNPKPQQIRILEAIFNSGMVNPPREEITKIREQLQEFGQVGDANVFYWFQNRKSRSKQK 106
Query: 84 Q 84
+
Sbjct: 107 K 107
>gi|115460964|ref|NP_001054082.1| Os04g0649400 [Oryza sativa Japonica Group]
gi|113565653|dbj|BAF15996.1| Os04g0649400, partial [Oryza sativa Japonica Group]
Length = 232
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+ Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 84 Q 84
Q
Sbjct: 152 Q 152
>gi|413947394|gb|AFW80043.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 439
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q+++L+ +Y C +P ++IQ +TA L +HG+I NV+ WFQN +AR ++
Sbjct: 303 RWTPTLEQIRMLKELYYGCDIRSPSSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQ 362
Query: 83 KQ 84
K+
Sbjct: 363 KR 364
>gi|75296486|sp|Q7XTV3.2|WOX4_ORYSJ RecName: Full=WUSCHEL-related homeobox 4; AltName: Full=OsWOX4
gi|122225920|sp|Q25AM2.1|WOX4_ORYSI RecName: Full=WUSCHEL-related homeobox 4; AltName: Full=OsWOX4
gi|32488911|emb|CAE04492.1| OSJNBb0059K02.2 [Oryza sativa Japonica Group]
gi|38345503|emb|CAD41713.2| OSJNBa0010D21.16 [Oryza sativa Japonica Group]
gi|90399357|emb|CAH68258.1| H0212B02.3 [Oryza sativa Indica Group]
gi|125549998|gb|EAY95820.1| hypothetical protein OsI_17689 [Oryza sativa Indica Group]
gi|125591865|gb|EAZ32215.1| hypothetical protein OsJ_16422 [Oryza sativa Japonica Group]
gi|332650574|gb|AEE81047.1| WUSCHEL-like homeobox protein [Oryza sativa Japonica Group]
Length = 236
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+ Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 84 Q 84
Q
Sbjct: 152 Q 152
>gi|229359309|emb|CAT02913.1| putative wuschel homeobox protein WOX3 [Acorus calamus]
Length = 54
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
W PTP QL ILE VY TP +IQ +TA L+ +G+I NV+ WFQN +A
Sbjct: 1 WNPTPEQLMILEEVYRSGVRTPNATQIQQITAHLSYYGKIEGKNVFYWFQNHKA 54
>gi|356547240|ref|XP_003542024.1| PREDICTED: WUSCHEL-related homeobox 2-like [Glycine max]
Length = 212
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW+PT Q+ +LE++Y + TP ++IQ +T+ L +G I NV+ WFQN +AR ++K
Sbjct: 21 RWSPTKEQIDMLENLYKQGIRTPSTEQIQQITSRLRAYGHIEGKNVFYWFQNHKARQRQK 80
>gi|242059187|ref|XP_002458739.1| hypothetical protein SORBIDRAFT_03g039380 [Sorghum bicolor]
gi|241930714|gb|EES03859.1| hypothetical protein SORBIDRAFT_03g039380 [Sorghum bicolor]
Length = 340
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE +Y+ P ++IQ +T L +HG I NV+ WFQN +AR + +
Sbjct: 47 RWNPTKEQVAVLEGLYEHGLRNPSAEQIQQITGRLREHGAIEGKNVFYWFQNHKARQRHR 106
Query: 84 Q 84
Q
Sbjct: 107 Q 107
>gi|46408855|emb|CAD88982.1| Homeobox protein HB3 [Oryza sativa Japonica Group]
Length = 238
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+ Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 84 Q 84
Q
Sbjct: 152 Q 152
>gi|116811068|emb|CAJ84142.1| WOX4 protein [Oryza sativa]
Length = 65
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+ Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 64
Query: 84 Q 84
Q
Sbjct: 65 Q 65
>gi|229359435|emb|CAT02902.2| putative wuschel homeobox protein WOX2 [Ginkgo biloba]
Length = 349
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE +Y + TP Q+IQ +T+ L G I NV+ WFQN +AR ++K
Sbjct: 49 RWNPTKEQIAVLEGLYRQGIRTPTAQQIQQITSRLRMFGNIEGKNVFYWFQNHKARQRQK 108
Query: 84 Q 84
Q
Sbjct: 109 Q 109
>gi|413950853|gb|AFW83502.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 525
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+ WFQNR++R K
Sbjct: 83 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQEYGQVGDANVFYWFQNRKSRSK 142
Query: 82 RKQ 84
KQ
Sbjct: 143 NKQ 145
>gi|413950852|gb|AFW83501.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 514
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+ WFQNR++R K
Sbjct: 72 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQEYGQVGDANVFYWFQNRKSRSK 131
Query: 82 RKQ 84
KQ
Sbjct: 132 NKQ 134
>gi|219888053|gb|ACL54401.1| unknown [Zea mays]
Length = 514
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+ WFQNR++R K
Sbjct: 72 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQEYGQVGDANVFYWFQNRKSRSK 131
Query: 82 RKQ 84
KQ
Sbjct: 132 NKQ 134
>gi|255581093|ref|XP_002531361.1| transcription factor, putative [Ricinus communis]
gi|223529021|gb|EEF31009.1| transcription factor, putative [Ricinus communis]
Length = 268
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
G+ RW PT Q+ +LE++Y + TP ++IQ +T L +G I NV+ W
Sbjct: 12 GDGTGAHQVNSRWNPTKEQIGLLENMYRQGIRTPTAEQIQQITTRLRDYGHIEGKNVFYW 71
Query: 73 FQNRRARLKRKQ 84
FQN +AR ++KQ
Sbjct: 72 FQNHKARQRQKQ 83
>gi|357128495|ref|XP_003565908.1| PREDICTED: WUSCHEL-related homeobox 12-like [Brachypodium
distachyon]
Length = 416
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW+P P Q++ILE +++ P + +I+ + A L + G +++ NV+ WFQNR++R K
Sbjct: 68 KARWSPRPEQIRILEAIFNAGVVNPPRDEIRRIRARLQEFGPVADANVFYWFQNRKSRTK 127
Query: 82 RKQSG 86
G
Sbjct: 128 HNGGG 132
>gi|224054787|ref|XP_002298364.1| predicted protein [Populus trichocarpa]
gi|222845622|gb|EEE83169.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
S S + RW+PT Q+ +LE Y + TP + I+ + + L +G I NV+ W
Sbjct: 3 VSSSGGASVNSRWSPTKEQISMLESFYSQGIRTPSTEMIEQIASRLKAYGHIEGKNVFYW 62
Query: 73 FQNRRARLKRKQ 84
FQN +AR ++KQ
Sbjct: 63 FQNHKARQRQKQ 74
>gi|380848548|emb|CBX45510.1| hypothetical protein, partial [Cyathea australis]
Length = 40
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 35/40 (87%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
QLQILE ++++ GTP KQ+I+++T EL++HGQISETNVY
Sbjct: 1 QLQILERLFEQESGTPNKQRIKEITIELSQHGQISETNVY 40
>gi|242088843|ref|XP_002440254.1| hypothetical protein SORBIDRAFT_09g028562 [Sorghum bicolor]
gi|241945539|gb|EES18684.1| hypothetical protein SORBIDRAFT_09g028562 [Sorghum bicolor]
Length = 391
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
+G + R RW P P Q++ILE +++ P + +I+ + +L ++G + + NV+ WF
Sbjct: 28 NGGRNPEPRPRWNPRPEQIRILEGIFNSGMVNPSRDEIRRIRLQLQEYGPVGDANVFYWF 87
Query: 74 QNRRARLKRK 83
QNR++R K K
Sbjct: 88 QNRKSRTKHK 97
>gi|357505539|ref|XP_003623058.1| WUSCHEL-related homeobox 3B [Medicago truncatula]
gi|355498073|gb|AES79276.1| WUSCHEL-related homeobox 3B [Medicago truncatula]
Length = 206
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW+PT QL ILE +Y TP +IQ +T L+ +G+I NV+ WFQN +AR ++K
Sbjct: 8 RWSPTTEQLMILEELYRSGIRTPSAVQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQK 67
>gi|357131265|ref|XP_003567259.1| PREDICTED: WUSCHEL-related homeobox 5-like [Brachypodium
distachyon]
Length = 311
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 6 PYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQIS 65
P P + L A RWTPT Q ++LE +Y + TP ++IQ + A L +HG +
Sbjct: 34 PVSPPMSPNSEAALLANARWTPTQEQRELLEGLYRQGLHTPSAEQIQGIAARLRQHGPVE 93
Query: 66 ETNVYNWFQNRRA 78
NV+ WFQN +A
Sbjct: 94 GKNVFYWFQNYKA 106
>gi|224077030|ref|XP_002305099.1| predicted protein [Populus trichocarpa]
gi|222848063|gb|EEE85610.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+ WFQNR++R K
Sbjct: 57 KPRWNPKPDQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSK 116
Query: 82 RK 83
+
Sbjct: 117 HR 118
>gi|169667043|gb|ACA64094.1| WOX2 [Petunia x hybrida]
Length = 256
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE +Y + TP ++IQ +T L G I NV+ WFQN +AR ++K
Sbjct: 19 RWNPTKEQIDLLESLYRQGIRTPSAEQIQQITGRLRAFGHIEGKNVFYWFQNHKARQRQK 78
Query: 84 Q 84
Q
Sbjct: 79 Q 79
>gi|61216997|sp|Q6YBV1.1|WUS_ANTMA RecName: Full=Protein WUSCHEL; AltName: Full=Protein ROSULATA
gi|37604222|gb|AAO23113.1| ROSULATA [Antirrhinum majus]
Length = 281
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 13 ASGSQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETN 68
SG RQ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I N
Sbjct: 26 GSGGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKN 85
Query: 69 VYNWFQNRRARLKRKQ 84
V+ WFQN +AR ++K+
Sbjct: 86 VFYWFQNHKARERQKK 101
>gi|89330209|emb|CAJ84163.1| WOX9A protein [Zea mays]
Length = 65
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 5 RWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQEYGQVGDANVFYWFQNRKSRSKNK 64
Query: 84 Q 84
Q
Sbjct: 65 Q 65
>gi|116811074|emb|CAJ84145.1| WOX9C protein [Oryza sativa]
Length = 65
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 5 RWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQNRKSRTKNK 64
>gi|159232358|emb|CAM32352.1| putative wuschel homeobox protein [Zea mays]
gi|413946524|gb|AFW79173.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 506
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R RW P P Q++ILE +++ P + +I+ + +L ++G + + NV+ WFQNR++R K
Sbjct: 53 RPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGPVGDANVFYWFQNRKSRTK 112
Query: 82 RK 83
K
Sbjct: 113 HK 114
>gi|413946525|gb|AFW79174.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R RW P P Q++ILE +++ P + +I+ + +L ++G + + NV+ WFQNR++R K
Sbjct: 53 RPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGPVGDANVFYWFQNRKSRTK 112
Query: 82 RK 83
K
Sbjct: 113 HK 114
>gi|356569315|ref|XP_003552848.1| PREDICTED: WUSCHEL-related homeobox 5-like [Glycine max]
Length = 174
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
SGS T RW PT Q+++L ++ TP +IQ ++ +L+ +G+I NV+ WF
Sbjct: 15 SGSATGTKCGRWNPTTEQVKVLTDLFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWF 74
Query: 74 QNRRARLKRKQSGV 87
QN +AR ++K+ V
Sbjct: 75 QNHKARERQKRRKV 88
>gi|75296370|sp|Q7XM13.2|WOX1A_ORYSJ RecName: Full=WUSCHEL-related homeobox 1A; AltName: Full=OsWOX1A;
Short=OsWOX1; AltName: Full=Protein WUS
gi|38346078|emb|CAE04846.2| OSJNBa0084K01.18 [Oryza sativa Japonica Group]
gi|116811060|emb|CAJ84138.1| WUS protein [Oryza sativa]
Length = 289
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 83 KQ 84
K+
Sbjct: 95 KK 96
>gi|116811090|emb|CAJ84153.1| WOX9 protein [Populus trichocarpa]
Length = 65
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+ WFQNR++R K +
Sbjct: 5 RWNPKPDQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHR 64
>gi|357130682|ref|XP_003566976.1| PREDICTED: WUSCHEL-related homeobox 7-like [Brachypodium
distachyon]
Length = 513
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ 63
G + PF + + RW P P Q++ILE +++ P + +I + +L ++G
Sbjct: 42 GRTFKSPFSGPEERNTDPKPRWNPRPEQIRILEALFNSGMANPPRDEIPRIRMKLQEYGP 101
Query: 64 ISETNVYNWFQNRRARLKRK 83
+ + NV+ WFQNR++R K K
Sbjct: 102 VGDANVFYWFQNRKSRSKNK 121
>gi|81686885|dbj|BAE48303.1| OsWUS protein [Oryza sativa Japonica Group]
Length = 289
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 83 KQ 84
K+
Sbjct: 95 KK 96
>gi|160221319|sp|Q33DK0.2|WOX1B_ORYSJ RecName: Full=WUSCHEL-related homeobox 1B; AltName: Full=OsWOX1B;
AltName: Full=OsWUS
Length = 289
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 83 KQ 84
K+
Sbjct: 95 KK 96
>gi|224108315|ref|XP_002314802.1| predicted protein [Populus trichocarpa]
gi|222863842|gb|EEF00973.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PT QL LE Y TP +IQ +T+EL + G+I NV+ WFQN +AR
Sbjct: 64 TRSSRWNPTAEQLLALEEKYSCGVRTPTTNQIQQITSELRRFGKIEGKNVFYWFQNHKAR 123
Query: 80 LKRKQSGV 87
++K V
Sbjct: 124 ERQKHRQV 131
>gi|218195765|gb|EEC78192.1| hypothetical protein OsI_17799 [Oryza sativa Indica Group]
Length = 285
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 32 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 91
Query: 83 KQ 84
K+
Sbjct: 92 KK 93
>gi|116309856|emb|CAH66891.1| OSIGBa0099L20.6 [Oryza sativa Indica Group]
Length = 288
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 83 KQ 84
K+
Sbjct: 95 KK 96
>gi|222629719|gb|EEE61851.1| hypothetical protein OsJ_16519 [Oryza sativa Japonica Group]
Length = 286
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 32 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 91
Query: 83 KQ 84
K+
Sbjct: 92 KK 93
>gi|110321612|emb|CAL18267.1| homeodomain transcription factor [Picea abies]
Length = 201
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PT Q+++LE +Y + TP +I+ + + L +G I NV+ WFQN +AR
Sbjct: 7 TMSTRWNPTKEQIELLEAMYSQGIRTPSADQIEQIASRLGMYGNIEGKNVFYWFQNHKAR 66
Query: 80 LKRKQS---GVVPN 90
+++Q GV N
Sbjct: 67 ERQRQKQERGVFGN 80
>gi|226431054|gb|ACO55494.1| wuschel 2 [Populus tomentosa]
Length = 264
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RWTPT Q++IL+ +Y KG +P +IQ ++A L K+G+I NV+ WFQN +AR +
Sbjct: 28 RWTPTTDQIRILKELY-YIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARER 86
Query: 82 RKQ 84
+K+
Sbjct: 87 QKK 89
>gi|116811072|emb|CAJ84144.1| WOX9 protein [Oryza sativa]
Length = 65
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I + +L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 5 RWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSKNK 64
>gi|226431052|gb|ACO55493.1| wuschel 1 [Populus tomentosa]
gi|429326656|gb|AFZ78668.1| Wuschel [Populus tomentosa]
Length = 258
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RWTPT Q++IL+ +Y KG +P +IQ ++A L K+G+I NV+ WFQN +AR +
Sbjct: 34 RWTPTTDQIRILKELY-YIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARER 92
Query: 82 RKQ 84
+K+
Sbjct: 93 QKK 95
>gi|356496653|ref|XP_003517180.1| PREDICTED: protein WUSCHEL-like [Glycine max]
Length = 295
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 13 ASGSQKLTARQ---RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
SG +RQ RWTPT Q++IL E Y+ +P ++IQ ++A L ++G+I N
Sbjct: 23 GSGKGGFLSRQSSTRWTPTNDQIRILKELYYNNGIRSPSAEQIQRISARLRQYGKIEGKN 82
Query: 69 VYNWFQNRRARLKRKQ 84
V+ WFQN +AR ++K+
Sbjct: 83 VFYWFQNHKARERQKK 98
>gi|224134106|ref|XP_002327757.1| predicted protein [Populus trichocarpa]
gi|222836842|gb|EEE75235.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RWTPT Q++IL+ +Y KG +P +IQ ++A L K+G+I NV+ WFQN +AR +
Sbjct: 34 RWTPTTDQIRILKELY-YIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARER 92
Query: 82 RKQ 84
+K+
Sbjct: 93 QKK 95
>gi|414881074|tpg|DAA58205.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 516
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+ WFQNR++R K
Sbjct: 70 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQQYGQVGDANVFYWFQNRKSRSK 129
Query: 82 RK 83
K
Sbjct: 130 NK 131
>gi|414881075|tpg|DAA58206.1| TPA: putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 515
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+ WFQNR++R K
Sbjct: 70 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQQYGQVGDANVFYWFQNRKSRSK 129
Query: 82 RK 83
K
Sbjct: 130 NK 131
>gi|159232356|emb|CAM32351.1| putative wuschel homeobox protein [Zea mays]
Length = 524
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+ WFQNR++R K
Sbjct: 70 KPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQQYGQVGDANVFYWFQNRKSRSK 129
Query: 82 RK 83
K
Sbjct: 130 NK 131
>gi|380848556|emb|CBX45514.1| hypothetical protein, partial [Equisetum giganteum]
Length = 40
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 34/40 (85%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
QLQ+LE +++ G P KQ+I+++TAEL++HGQISETNVY
Sbjct: 1 QLQLLEKFFEQENGAPSKQRIKEITAELSQHGQISETNVY 40
>gi|297829678|ref|XP_002882721.1| hypothetical protein ARALYDRAFT_478466 [Arabidopsis lyrata subsp.
lyrata]
gi|297328561|gb|EFH58980.1| hypothetical protein ARALYDRAFT_478466 [Arabidopsis lyrata subsp.
lyrata]
Length = 186
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT QL+IL ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 86
Query: 84 QSGV 87
+ +
Sbjct: 87 RRKI 90
>gi|116831042|gb|ABK28476.1| unknown [Arabidopsis thaliana]
Length = 272
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
A RW PTP Q+ LE +Y TP ++IQ + ++L K+G+I NV+ WFQN +A
Sbjct: 58 ATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKA 115
>gi|18379236|ref|NP_565263.1| WUSCHEL-related homeobox 6 [Arabidopsis thaliana]
gi|61217449|sp|Q9ZVF5.2|WOX6_ARATH RecName: Full=WUSCHEL-related homeobox 6; AltName: Full=Protein
PRETTY FEW SEEDS 2
gi|20197404|gb|AAC67326.2| putative homeodomain transcription factor [Arabidopsis thaliana]
gi|21553966|gb|AAM63047.1| putative homeodomain transcription factor [Arabidopsis thaliana]
gi|40889020|gb|AAP37137.2| WOX6 protein [Arabidopsis thaliana]
gi|58429113|gb|AAW78002.1| pretty few seeds 2 [Arabidopsis thaliana]
gi|91806125|gb|ABE65791.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis thaliana]
gi|330250367|gb|AEC05461.1| WUSCHEL-related homeobox 6 [Arabidopsis thaliana]
Length = 271
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
A RW PTP Q+ LE +Y TP ++IQ + ++L K+G+I NV+ WFQN +A
Sbjct: 58 ATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKA 115
>gi|297836512|ref|XP_002886138.1| hypothetical protein ARALYDRAFT_900150 [Arabidopsis lyrata subsp.
lyrata]
gi|297331978|gb|EFH62397.1| hypothetical protein ARALYDRAFT_900150 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 20 TARQ---RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
T RQ RWTPT Q++IL E Y+ +P +IQ +TA L ++G+I NV+ WFQN
Sbjct: 31 TCRQTSTRWTPTTEQIRILKELYYNSGVRSPTADQIQKITARLRQYGKIEGKNVFYWFQN 90
Query: 76 RRARLKRKQ 84
+AR ++K+
Sbjct: 91 HKARERQKK 99
>gi|30681653|ref|NP_187735.2| WUSCHEL-related homeobox 5 [Arabidopsis thaliana]
gi|61217376|sp|Q8H1D2.1|WOX5_ARATH RecName: Full=WUSCHEL-related homeobox 5
gi|24953995|gb|AAN64659.1| homeodomain transcription factor [Arabidopsis thaliana]
gi|37955172|gb|AAP37136.1| WOX5 protein [Arabidopsis thaliana]
gi|225898633|dbj|BAH30447.1| hypothetical protein [Arabidopsis thaliana]
gi|332641500|gb|AEE75021.1| WUSCHEL-related homeobox 5 [Arabidopsis thaliana]
Length = 182
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT QL+IL ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 84 QSGV 87
+ +
Sbjct: 84 RRKI 87
>gi|429326658|gb|AFZ78669.1| Wuschel [Populus tomentosa]
Length = 279
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RWTPT Q++IL+ +Y KG +P +IQ ++A L K+G+I NV+ WFQN +AR +
Sbjct: 28 RWTPTTDQIRILKELY-YIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARER 86
Query: 82 RKQ 84
+K+
Sbjct: 87 QKK 89
>gi|89330211|emb|CAJ84164.1| WOX9B protein [Zea mays]
Length = 65
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P + +I + L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 5 RWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMRLQQYGQVGDANVFYWFQNRKSRSKNK 64
>gi|89330213|emb|CAJ84165.1| WOX9C protein [Zea mays]
Length = 65
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R RW P P Q++ILE +++ P + +I+ + +L ++G + + NV+ WFQNR++R K
Sbjct: 3 RPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGPVGDANVFYWFQNRKSRTK 62
Query: 82 RK 83
K
Sbjct: 63 HK 64
>gi|12321880|gb|AAG50976.1|AC073395_18 hypothetical protein; 64772-65429 [Arabidopsis thaliana]
Length = 165
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT QL+IL ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 84 Q 84
+
Sbjct: 84 R 84
>gi|229359291|emb|CAT02904.1| putative wuschel homeobox protein WOX3B [Ginkgo biloba]
Length = 178
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW TP QL ILE +Y +IQ +TA L+ +G+I NV+ WFQN +AR
Sbjct: 31 TGTARWNSTPEQLMILEDIYRGGIQNLTAVQIQQITAHLSLYGKIEGKNVFYWFQNHKAR 90
Query: 80 LKRKQSGVVPNNAESE 95
++K + +N + E
Sbjct: 91 DRQKLRRINMDNTKQE 106
>gi|356540807|ref|XP_003538876.1| PREDICTED: protein WUSCHEL-like [Glycine max]
Length = 324
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 13 ASGSQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETN 68
SG +RQ RWTPT Q++IL+ +Y + +P ++IQ ++A L ++G+I N
Sbjct: 56 GSGKGGFLSRQSSTRWTPTNDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKN 115
Query: 69 VYNWFQNRRARLKRKQ 84
V+ WFQN +AR ++K+
Sbjct: 116 VFYWFQNHKARERQKK 131
>gi|116831083|gb|ABK28496.1| unknown [Arabidopsis thaliana]
Length = 293
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 20 TARQ---RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
T RQ RWTPT Q++IL E Y+ +P +IQ +TA L + G+I NV+ WFQN
Sbjct: 31 TCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQN 90
Query: 76 RRARLKRKQ 84
+AR ++K+
Sbjct: 91 HKARERQKK 99
>gi|18398572|ref|NP_565429.1| protein WUSCHEL [Arabidopsis thaliana]
gi|61217041|sp|Q9SB92.2|WUS_ARATH RecName: Full=Protein WUSCHEL; Short=AtWUS; AltName: Full=Plant
growth activator 6
gi|20197596|gb|AAD20131.2| putative homeodomain transcription factor (WUSCHEL, WUS)
[Arabidopsis thaliana]
gi|21592502|gb|AAM64452.1| putative homeodomain transcription factor (WUSCHEL, WUS)
[Arabidopsis thaliana]
gi|91806188|gb|ABE65822.1| homeodomain transcription factor [Arabidopsis thaliana]
gi|114050597|gb|ABI49448.1| At2g17950 [Arabidopsis thaliana]
gi|330251610|gb|AEC06704.1| protein WUSCHEL [Arabidopsis thaliana]
Length = 292
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 20 TARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
T RQ RWTPT Q++IL+ +Y + +P +IQ +TA L + G+I NV+ WFQN
Sbjct: 31 TCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQN 90
Query: 76 RRARLKRKQ 84
+AR ++K+
Sbjct: 91 HKARERQKK 99
>gi|224555005|gb|ACN56438.1| WUSCHEL-like protein 1 [Ocotea catharinensis]
Length = 259
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 19 LTARQ---RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWF 73
L RQ RW PT Q++IL+ +Y KG +P +IQ ++A L K+G+I NV+ WF
Sbjct: 20 LLCRQTSTRWNPTTDQIRILKELY-YIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWF 78
Query: 74 QNRRARLKRKQS 85
QN +AR ++K+S
Sbjct: 79 QNHKARERQKKS 90
>gi|229359357|emb|CAT02938.1| putative wuschel homeobox protein WUS [Pinus sylvestris]
Length = 245
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
ASGS RW PT Q+ +L+ +Y TP ++IQ ++++L ++G+I NV+ W
Sbjct: 7 ASGS-------RWNPTAEQVTLLKELYRSGMRTPTAEQIQQISSQLKRYGKIEGKNVFYW 59
Query: 73 FQNRRARLKRKQ 84
FQN +AR ++K+
Sbjct: 60 FQNHKARERQKR 71
>gi|116811084|emb|CAJ84150.1| WOX2 protein [Populus trichocarpa]
Length = 65
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW+PT Q+ +LE Y + TP + I+ + + L +G I NV+ WFQN +AR ++K
Sbjct: 5 RWSPTKEQISMLESFYSQGIRTPSTEMIEQIASRLKAYGHIEGKNVFYWFQNHKARQRQK 64
Query: 84 Q 84
Q
Sbjct: 65 Q 65
>gi|225431151|ref|XP_002266323.1| PREDICTED: protein WUSCHEL [Vitis vinifera]
gi|297735020|emb|CBI17382.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 14 SGSQK--LTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISET 67
SGS K RQ RWTPT Q++IL+ +Y + +P ++IQ ++A L ++G+I
Sbjct: 22 SGSSKGSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGK 81
Query: 68 NVYNWFQNRRARLKRKQ 84
NV+ WFQN +AR ++K+
Sbjct: 82 NVFYWFQNHKARERQKK 98
>gi|224109366|ref|XP_002315173.1| predicted protein [Populus trichocarpa]
gi|222864213|gb|EEF01344.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA--RLK 81
RW PT Q+++L ++ TP +IQ+++ +L+ +G+I NV+ WFQN +A R K
Sbjct: 27 RWNPTTEQVKLLTDLFRSGLRTPSTDEIQNISTQLSFYGKIESKNVFYWFQNHKARERQK 86
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNPESIQ-----SLEDSAP 120
R++ V +A + H ++ E++Q S +++ P
Sbjct: 87 RRRVSVDEKDAMIHFTEINHVNEPERVIETLQLFPLNSFDEAGP 130
>gi|380848560|emb|CBX45516.1| hypothetical protein, partial [Psilotum nudum]
Length = 40
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
QLQILE ++ GTP KQKI+ +TAEL+ HG ISETNVY
Sbjct: 1 QLQILERIFALGSGTPNKQKIKGITAELSYHGHISETNVY 40
>gi|147857701|emb|CAN80814.1| hypothetical protein VITISV_020465 [Vitis vinifera]
Length = 280
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 14 SGSQK--LTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISET 67
SGS K RQ RWTPT Q++IL+ +Y + +P ++IQ ++A L ++G+I
Sbjct: 22 SGSSKGSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGK 81
Query: 68 NVYNWFQNRRARLKRKQ 84
NV+ WFQN +AR ++K+
Sbjct: 82 NVFYWFQNHKARERQKK 98
>gi|356537978|ref|XP_003537483.1| PREDICTED: WUSCHEL-related homeobox 5-like [Glycine max]
Length = 179
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ +L+ +G+I NV+ WFQN +AR ++K
Sbjct: 30 RWNPTTEQVKVLTELFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQK 89
Query: 84 QSGVVPNNAESE 95
+ V + SE
Sbjct: 90 RRKVDKDVIRSE 101
>gi|380848564|emb|CBX45518.1| hypothetical protein, partial [Ophioglossum lusitanicum]
Length = 40
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
QLQ+LE ++ + GTP KQ I+++TAEL +HG ISETNVY
Sbjct: 1 QLQVLEMMFQQSSGTPNKQNIKEITAELVQHGPISETNVY 40
>gi|380294101|gb|AFD50636.1| WUSCHEL, partial [Brassica napus]
Length = 214
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 14 SGSQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNV 69
SGS RQ RWTPT Q++IL+ +Y + +P +IQ ++A L ++G+I NV
Sbjct: 23 SGSGCYPCRQTSTRWTPTTEQIRILKDLYYNSGVRSPTADQIQKISARLRQYGKIEGKNV 82
Query: 70 YNWFQNRRARLKRKQ 84
+ WFQN +AR ++K+
Sbjct: 83 FYWFQNHKARERQKK 97
>gi|449464944|ref|XP_004150189.1| PREDICTED: WUSCHEL-related homeobox 2-like [Cucumis sativus]
Length = 238
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
RW PT Q+ ILE++Y + TP +IQ +T L +G I NV+ WFQN +A
Sbjct: 24 RWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKA 78
>gi|359486555|ref|XP_002276008.2| PREDICTED: WUSCHEL-related homeobox 5-like [Vitis vinifera]
Length = 176
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 45/71 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++++L+ +G+I NV+ WFQN +AR ++K
Sbjct: 28 RWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQK 87
Query: 84 QSGVVPNNAES 94
+ V + +++
Sbjct: 88 RRRVSVDESDA 98
>gi|361066801|gb|AEW07712.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
gi|383154412|gb|AFG59345.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
gi|383154417|gb|AFG59350.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
Length = 136
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 15/70 (21%)
Query: 60 KHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAE------------SRKQ 107
+HGQISETNVYNWFQNR+AR KRKQ +P+ E+E T E S Q
Sbjct: 1 QHGQISETNVYNWFQNRKARAKRKQ---LPSQRGGESENETDDEYPGEKRFKPQHDSNAQ 57
Query: 108 NPESIQSLED 117
NP+S S D
Sbjct: 58 NPKSGHSEAD 67
>gi|296086089|emb|CBI31530.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 45/71 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++++L+ +G+I NV+ WFQN +AR ++K
Sbjct: 28 RWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQK 87
Query: 84 QSGVVPNNAES 94
+ V + +++
Sbjct: 88 RRRVSVDESDA 98
>gi|160221294|sp|A3BKM2.1|WOX13_ORYSJ RecName: Full=WUSCHEL-related homeobox 13; AltName: Full=OsWOX13;
AltName: Full=Protein WOX9
gi|125600535|gb|EAZ40111.1| hypothetical protein OsJ_24554 [Oryza sativa Japonica Group]
Length = 306
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 9 DPFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
PF + G +++ + R P P Q++ILE +++ P + +I + +L ++GQ+ +
Sbjct: 120 SPFSSVGEERVPDPKPRRNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDA 179
Query: 68 NVYNWFQNRRARLKRK 83
NV+ WFQNR++R K K
Sbjct: 180 NVFYWFQNRKSRSKNK 195
>gi|383154415|gb|AFG59348.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
gi|383154416|gb|AFG59349.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
Length = 136
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 15/70 (21%)
Query: 60 KHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAE------------SRKQ 107
+HGQISETNVYNWFQNR+AR KRKQ +P+ E+E T E S Q
Sbjct: 1 QHGQISETNVYNWFQNRKARAKRKQ---LPSQRGGESENETDDEYPGEKRFKPQHDSNAQ 57
Query: 108 NPESIQSLED 117
NP+S S D
Sbjct: 58 NPKSGHSEAD 67
>gi|350536913|ref|NP_001234015.1| protein WUSCHEL [Solanum lycopersicum]
gi|61217026|sp|Q84VT7.1|WUS_SOLLC RecName: Full=Protein WUSCHEL; AltName: Full=LeWUS
gi|28070968|emb|CAD61961.1| wuschel protein [Solanum lycopersicum]
Length = 272
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 21 ARQRWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I NV+ WFQN +AR
Sbjct: 23 SSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKAR 82
Query: 80 LKRKQ-----SGVVPNNAESEAETVTH 101
++K+ + NN S + + H
Sbjct: 83 ERQKKRLIAAASATDNNNISSMQMIPH 109
>gi|229359361|emb|CAT03216.1| putative wuschel-related homeobox 5 protein [Nymphaea
jamesoniana]
Length = 198
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 42/64 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP ++IQ ++++L+ +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKVLTDLFKAGLRTPSAEQIQRISSQLSCYGKIESKNVFYWFQNHKARERQK 88
Query: 84 QSGV 87
+ +
Sbjct: 89 RRKI 92
>gi|300174954|dbj|BAJ10712.1| WUSCHEL ortholog [Polypleurum stylosum]
Length = 224
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 12 VASGSQK--LTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQIS 65
VAS S K RQ RWTPT Q++IL+ +Y + +P +IQ ++A L ++G+I
Sbjct: 9 VASYSTKGAFLCRQSSTRWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIE 68
Query: 66 ETNVYNWFQNRRARLKRKQ 84
NV+ WFQN +AR ++K+
Sbjct: 69 GKNVFYWFQNHKARERQKK 87
>gi|224094963|ref|XP_002310306.1| predicted protein [Populus trichocarpa]
gi|222853209|gb|EEE90756.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RW PT Q++IL+ +Y KG +P +IQ ++A L K+G+I NV+ WFQN +AR +
Sbjct: 28 RWNPTTDQIRILKELY-YIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARER 86
Query: 82 RKQ 84
+K+
Sbjct: 87 QKK 89
>gi|383154413|gb|AFG59346.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
gi|383154414|gb|AFG59347.1| Pinus taeda anonymous locus 0_9488_01 genomic sequence
Length = 136
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 15/70 (21%)
Query: 60 KHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAE------------SRKQ 107
+HGQISETNVYNWFQNR+AR KRKQ +P+ E+E T E S Q
Sbjct: 1 QHGQISETNVYNWFQNRKARAKRKQ---LPSQRGGESENETDDEYPGEKRFKPQHDSNAQ 57
Query: 108 NPESIQSLED 117
NP+S S D
Sbjct: 58 NPKSGHSEAD 67
>gi|325451999|gb|ADZ13564.1| Wuschel [Solanum lycopersicum]
Length = 272
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 21 ARQRWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I NV+ WFQN +AR
Sbjct: 23 SSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKAR 82
Query: 80 LKRKQ-----SGVVPNNAESEAETVTH 101
++K+ + NN S + + H
Sbjct: 83 ERQKKRLIAAASATDNNNISSMQMIPH 109
>gi|154720971|gb|ABS84661.1| WUSCHEL-like protein [Citrus sinensis]
gi|310657307|gb|ADP02393.1| WUSCHEL [Citrus sinensis]
Length = 291
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 24 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA--RL 80
RWTPT Q++IL+ +Y + +P ++IQ ++A L ++G+I NV+ WFQN +A RL
Sbjct: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
Query: 81 KRKQSGVVPNNAES 94
K+K G + A++
Sbjct: 93 KKKIEGSSTSAADN 106
>gi|422898303|dbj|BAM67020.1| hypothetical protein [Silene latifolia]
Length = 317
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 24 RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q+++L E Y+ +P +IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 33 RWTPTTEQIKLLKELYYNNGVRSPTADQIQAICARLRRYGKIEGKNVFYWFQNHKARERQ 92
Query: 83 KQSGVVPNN 91
K+ P N
Sbjct: 93 KKRLTPPTN 101
>gi|224104459|ref|XP_002313442.1| predicted protein [Populus trichocarpa]
gi|222849850|gb|EEE87397.1| predicted protein [Populus trichocarpa]
Length = 60
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE Y + TP + I+ +T+ L +G I NV+ WFQN +AR ++K
Sbjct: 1 RWNPTKEQISMLESFYSQGIRTPSTEMIEQITSRLKAYGHIEGKNVFYWFQNHKARQRQK 60
>gi|188531740|gb|ACD62900.1| wuschel-like protein [Ipomoea nil]
Length = 315
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL E Y+ +P +IQ ++A+L ++G+I NV+ WFQN +AR ++
Sbjct: 46 RWTPTTEQIRILKELYYNNGVRSPTADQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQ 105
Query: 83 KQ 84
K+
Sbjct: 106 KK 107
>gi|61217028|sp|Q8LL11.1|WUS_PETHY RecName: Full=Protein WUSCHEL; AltName: Full=PhWUS; AltName:
Full=Protein TERMINATOR
gi|22087128|gb|AAM90847.1|AF481951_1 wuschel protein [Petunia x hybrida]
Length = 307
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 16 SQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
S RQ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I NV+
Sbjct: 36 SSNFMCRQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFY 95
Query: 72 WFQNRRARLKRKQ 84
WFQN +AR ++K+
Sbjct: 96 WFQNHKARERQKK 108
>gi|116811088|emb|CAJ84152.1| WOX6 protein [Populus trichocarpa]
Length = 65
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T RW PT QL LE Y TP +IQ +T+EL + G+I NV+ WFQN +AR
Sbjct: 1 TRSSRWNPTAEQLLALEEKYSCGVRTPTTNQIQQITSELRRFGKIEGKNVFYWFQNHKAR 60
Query: 80 LKRK 83
++K
Sbjct: 61 ERQK 64
>gi|422898307|dbj|BAM67022.1| protein WUSCHEL-like [Silene diclinis]
Length = 319
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 24 RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q+++L E Y+ +P +IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 32 RWTPTTEQIKLLKELYYNNGVRSPTADQIQAICARLRRYGKIEGKNVFYWFQNHKARERQ 91
Query: 83 KQSGVVPNN 91
K+ P N
Sbjct: 92 KKRLTPPTN 100
>gi|229359341|emb|CAT02929.1| putative wuschel homeobox protein WOX2 [Gnetum gnemon]
Length = 50
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 27 PTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
PT QL+ILE+VY+ +PR ++IQ +TAEL +HG ++ NV+ WFQ
Sbjct: 3 PTKEQLRILENVYNGGNKSPRTEQIQHITAELRRHGNVAGINVFYWFQ 50
>gi|159232350|emb|CAM32348.1| putative wuschel homeobox protein [Zea mays]
Length = 272
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PTP Q+++L ++ TP +IQ ++A L G++ NV+ WFQN +AR
Sbjct: 52 RWNPTPEQVKVLTELFHAGLRTPSADQIQRISAHLGAFGKVESKNVFYWFQNHKAR 107
>gi|116811062|emb|CAJ84139.1| WUS protein [Populus trichocarpa]
Length = 259
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RW PT Q++IL+ +Y KG +P +IQ ++A L K+G+I NV+ WFQN +AR +
Sbjct: 28 RWNPTTDQIRILKELY-YIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARER 86
Query: 82 RKQ 84
+K+
Sbjct: 87 QKK 89
>gi|449434164|ref|XP_004134866.1| PREDICTED: protein WUSCHEL-like [Cucumis sativus]
gi|449491364|ref|XP_004158873.1| PREDICTED: protein WUSCHEL-like [Cucumis sativus]
Length = 304
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL E Y+ +P +IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 39 RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 98
Query: 83 KQ 84
K+
Sbjct: 99 KK 100
>gi|151347432|gb|ABS01330.1| WUSCHEL protein [Streptocarpus rexii]
Length = 273
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 24 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL+ +Y + +P ++IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 31 RWTPTTDQIRILKDLYYNNGLRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 90
Query: 83 KQSGVVPN 90
K+ N
Sbjct: 91 KKRFTCDN 98
>gi|422898311|dbj|BAM67024.1| protein WUSCHEL-like [Silene dioica]
Length = 319
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 24 RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q+++L E Y+ +P +IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 32 RWTPTTEQIKLLKELYYNNGVRSPTADQIQAICARLRRYGKIEGKNVFYWFQNHKARERQ 91
Query: 83 KQSGVVPNN 91
K+ P N
Sbjct: 92 KKRLTPPTN 100
>gi|357483743|ref|XP_003612158.1| WUSCHEL [Medicago truncatula]
gi|218456562|gb|ACK77479.1| WUSCHEL [Medicago truncatula]
gi|355513493|gb|AES95116.1| WUSCHEL [Medicago truncatula]
Length = 302
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL+ +Y + +P ++IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 30 RWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 89
Query: 83 KQ 84
K+
Sbjct: 90 KK 91
>gi|255571841|ref|XP_002526863.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223533762|gb|EEF35494.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 192
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ +L+ +G+I NV+ WFQN +AR ++K
Sbjct: 41 RWNPTSEQVKVLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQK 100
Query: 84 QSGVVPNNAE 93
+ V + E
Sbjct: 101 RRRVSTDEKE 110
>gi|50508276|dbj|BAD32125.1| putative homeodomain transcription factor [Oryza sativa Japonica
Group]
Length = 478
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 10 PFVASGSQKL-TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
PF + G +++ + R P P Q++ILE +++ P + +I + +L ++GQ+ + N
Sbjct: 227 PFSSVGEERVPDPKPRRNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDAN 286
Query: 69 VYNWFQNRRARLKRK 83
V+ WFQNR++R K K
Sbjct: 287 VFYWFQNRKSRSKNK 301
>gi|255579795|ref|XP_002530735.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223529699|gb|EEF31641.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 297
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL+ +Y + +P ++IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 40 RWTPTTDQIRILKDLYYNSGVRSPTGEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 99
Query: 83 KQ 84
K+
Sbjct: 100 KK 101
>gi|229359295|emb|CAT02906.1| putative wuschel homeobox protein WUS [Ginkgo biloba]
Length = 261
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 12 VASGSQKLTARQRWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
V SG + RW PTP QL IL E Y +P +IQ ++ +L+++G+I NV+
Sbjct: 8 VGSGYVYRQSGTRWNPTPEQLSILSELYYRNGIRSPSADQIQRISWKLSRYGKIEGKNVF 67
Query: 71 NWFQNRRARLKRKQ 84
WFQN +AR ++K+
Sbjct: 68 YWFQNHKARERQKK 81
>gi|413951878|gb|AFW84527.1| putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 235
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PTP Q+++L ++ TP +IQ ++A L G++ NV+ WFQN +AR
Sbjct: 16 RWNPTPEQVKVLTELFRAGLRTPSTDQIQRISAHLGAFGKVESKNVFYWFQNHKAR 71
>gi|390124504|emb|CCE89082.1| transcription factor WUS [Helianthus annuus]
Length = 293
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 11 FVASGSQKLTARQ---RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISE 66
F S RQ RWTPT Q++IL E Y+ +P +IQ + A+L ++G+I
Sbjct: 13 FGNKNSNTYACRQSSTRWTPTSDQIRILKELYYNNGIRSPTADQIQRIAAQLRQYGKIEG 72
Query: 67 TNVYNWFQNRRARLKRKQ 84
NV+ WFQN +AR ++K+
Sbjct: 73 KNVFYWFQNHKARERQKK 90
>gi|89330205|emb|CAJ84161.1| WOX5A protein [Zea mays]
Length = 65
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PTP Q+++L ++ TP +IQ ++A L G++ NV+ WFQN +AR
Sbjct: 5 RWNPTPEQVKVLTELFHAGLRTPSADQIQRISAHLGAFGKVESKNVFYWFQNHKAR 60
>gi|229359359|emb|CAT03215.1| putative wuschel homeobox protein [Nymphaea jamesoniana]
Length = 276
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RW PT Q++IL E Y+ +P ++IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 34 RWIPTAEQIRILRELYYNNGVRSPSAEQIQKISARLRQYGKIEGKNVFYWFQNHKARERQ 93
Query: 83 KQ 84
K+
Sbjct: 94 KK 95
>gi|224173355|ref|XP_002339759.1| predicted protein [Populus trichocarpa]
gi|222832180|gb|EEE70657.1| predicted protein [Populus trichocarpa]
Length = 73
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RWTPT Q++IL+ +Y KG +P +IQ ++A L K+G+I NV+ WFQN +AR +
Sbjct: 1 RWTPTTDQIRILKELY-YIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARER 59
Query: 82 RKQ 84
+K+
Sbjct: 60 QKK 62
>gi|356558159|ref|XP_003547375.1| PREDICTED: uncharacterized protein LOC100779632 [Glycine max]
Length = 219
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
++ RW+PT Q+ +LE+ Y + TP ++IQ +T+ L +G I NV+ WFQN +A
Sbjct: 21 SSVSRWSPTKEQIDMLENFYKQGIRTPSTEQIQQITSRLRAYGYIEGKNVFYWFQNHKA 79
>gi|297806591|ref|XP_002871179.1| hypothetical protein ARALYDRAFT_349845 [Arabidopsis lyrata subsp.
lyrata]
gi|297317016|gb|EFH47438.1| hypothetical protein ARALYDRAFT_349845 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 88
Query: 84 QSGV 87
+ +
Sbjct: 89 RRRI 92
>gi|300174966|dbj|BAJ10718.1| WUSCHEL ortholog [Terniopsis minor]
Length = 313
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL+ +Y + +P +IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 36 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 95
Query: 83 KQ 84
K+
Sbjct: 96 KK 97
>gi|357492585|ref|XP_003616581.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355517916|gb|AES99539.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 184
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ +L+ +G+I NV+ WFQN +AR ++K
Sbjct: 33 RWNPTTEQVKLLTELFRAGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQK 92
Query: 84 QSGV 87
+ V
Sbjct: 93 RRKV 96
>gi|300174958|dbj|BAJ10714.1| WUSCHEL ortholog [Weddellina squamulosa]
Length = 260
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL+ +Y + +P +IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 27 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 86
Query: 83 KQ 84
K+
Sbjct: 87 KK 88
>gi|229359349|emb|CAT02933.1| putative wuschel homeobox protein WOX9 [Pinus sylvestris]
Length = 52
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
RW P P Q+QILE +++ + P+++ I+ +T +L + G + E N++ WFQ
Sbjct: 2 RWNPKPEQVQILEEIFNSGQVNPKREGIKKITTQLQEFGDVGEANIFYWFQ 52
>gi|300174942|dbj|BAJ10706.1| WUSCHEL ortholog [Hydrobryum japonicum]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL+ +Y + +P +IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 26 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 85
Query: 83 KQ 84
K+
Sbjct: 86 KK 87
>gi|229359293|emb|CAT02905.1| putative wuschel homeobox protein WOX4 [Ginkgo biloba]
Length = 54
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
W+P P Q+ ILE Y TP ++I+ +TA+L +G+I NV+ WFQN +A
Sbjct: 1 WSPKPEQITILEMFYKGGMRTPNAEQIEHITAQLRHYGKIEGKNVFYWFQNHKA 54
>gi|300174948|dbj|BAJ10709.1| WUSCHEL ortholog [Cladopus doianus]
Length = 222
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL+ +Y + +P +IQ ++A L ++G+I NV+ WFQN +AR ++
Sbjct: 26 RWTPTTDQIRILKDLYYNNGIRSPNADQIQRISASLRQYGKIEGKNVFYWFQNHKARERQ 85
Query: 83 KQ 84
K+
Sbjct: 86 KK 87
>gi|229359339|emb|CAT02928.1| putative wuschel homeobox protein WOX4 [Gnetum gnemon]
Length = 52
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
RW PTP Q++ILE Y TP ++I+ +TA+L ++G+I NV+ WFQ
Sbjct: 2 RWNPTPDQIRILEMFYKGGMRTPNAEQIEHITAQLRQYGKIEGKNVFYWFQ 52
>gi|356499151|ref|XP_003518406.1| PREDICTED: WUSCHEL-related homeobox 5-like [Glycine max]
Length = 177
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ +L+ +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQK 86
>gi|229359353|emb|CAT02935.1| putative wuschel homeobox protein WOX4 [Pinus sylvestris]
Length = 52
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
RW PTP Q++ILE Y TP ++I+ +TA+L ++G+I NV+ WFQ
Sbjct: 2 RWNPTPDQIRILEMFYKGGMRTPNAEQIEHITAQLRQYGKIEGKNVFYWFQ 52
>gi|229359327|emb|CAT02922.1| putative wuschel homeobox protein WOX4 [Amborella trichopoda]
Length = 54
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
RW PT Q+ ILE +Y TP Q+I+ +TA+L ++G+I NV+ WFQ
Sbjct: 4 RWNPTQEQIAILEMLYRGGMRTPNAQQIEHITAQLGRYGKIEGKNVFYWFQ 54
>gi|300681498|emb|CBH32593.1| homeobox domain containing protein, expressed [Triticum aestivum]
Length = 209
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR---- 79
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73
Query: 80 --LKRKQSGVVPNNAESEAET 98
+R+ + P+++ +E E+
Sbjct: 74 HKKRRRVASCSPDSSSNEEES 94
>gi|449517882|ref|XP_004165973.1| PREDICTED: WUSCHEL-related homeobox 5-like [Cucumis sativus]
Length = 196
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ L+ +G+I NV+ WFQN +AR ++K
Sbjct: 36 RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 95
Query: 84 Q 84
+
Sbjct: 96 R 96
>gi|449441600|ref|XP_004138570.1| PREDICTED: WUSCHEL-related homeobox 5-like [Cucumis sativus]
Length = 196
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ L+ +G+I NV+ WFQN +AR ++K
Sbjct: 36 RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 95
Query: 84 Q 84
+
Sbjct: 96 R 96
>gi|89330199|emb|CAJ84158.1| WOX5/7B protein [Populus trichocarpa]
Length = 65
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ+++ +L+ +G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTTEQVKLLTDLFRSGLRTPSTDEIQNISTQLSFYGKIESKNVFYWFQNHKARERQK 64
Query: 84 Q 84
+
Sbjct: 65 R 65
>gi|229359347|emb|CAT02932.1| putative wuschel homeobox protein WUS [Gnetum gnemon]
Length = 220
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RW PTP QL IL+ +Y +G +P ++I ++ +L+ +G+I NV+ WFQN +AR +
Sbjct: 16 RWNPTPEQLSILKELYHG-RGIRSPSAEQIHHISWKLSSYGKIEGKNVFYWFQNHKARQR 74
Query: 82 RKQ 84
+K+
Sbjct: 75 QKE 77
>gi|422898313|dbj|BAM67025.1| protein WUSCHEL-like [Silene vulgaris]
Length = 270
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q+++L E Y+ +P +IQ + + L ++G+I NV+ WFQN +AR ++
Sbjct: 25 RWTPTTEQIKLLKELYYNNGVRSPTADQIQAICSRLRRYGKIEGKNVFYWFQNHKARERQ 84
Query: 83 KQ 84
K+
Sbjct: 85 KK 86
>gi|422898315|dbj|BAM67026.1| protein WUSCHEL-like [Silene vulgaris]
Length = 304
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q+++L E Y +P +IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 33 RWTPTTEQIKLLKELYYTNGVRSPTADQIQAICARLRRYGKIEGKNVFYWFQNHKARERQ 92
Query: 83 KQ 84
K+
Sbjct: 93 KK 94
>gi|15239229|ref|NP_196196.1| WUSCHEL-related homeobox 7 [Arabidopsis thaliana]
gi|61217420|sp|Q9FFK0.1|WOX7_ARATH RecName: Full=WUSCHEL-related homeobox 7
gi|9759102|dbj|BAB09671.1| unnamed protein product [Arabidopsis thaliana]
gi|225898893|dbj|BAH30577.1| hypothetical protein [Arabidopsis thaliana]
gi|332003539|gb|AED90922.1| WUSCHEL-related homeobox 7 [Arabidopsis thaliana]
Length = 122
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQK 88
>gi|229359333|emb|CAT02925.1| putative wuschel homeobox protein WOX9 [Amborella trichopoda]
Length = 52
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
W+P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQN
Sbjct: 1 WSPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQN 51
>gi|229359323|emb|CAT02920.1| putative wuschel homeobox protein WOX3 [Amborella trichopoda]
Length = 54
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
W PT QL ILE +Y TP +IQ +T L+ +G+I NV+ WFQN +A
Sbjct: 1 WNPTVEQLMILEEMYRGGIRTPNALQIQHITTHLSYYGKIEGKNVFYWFQNHKA 54
>gi|242078653|ref|XP_002444095.1| hypothetical protein SORBIDRAFT_07g007600 [Sorghum bicolor]
gi|241940445|gb|EES13590.1| hypothetical protein SORBIDRAFT_07g007600 [Sorghum bicolor]
Length = 282
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G + TAR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQ
Sbjct: 17 GGEPTTARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQ 76
Query: 75 N 75
N
Sbjct: 77 N 77
>gi|372126558|gb|AEX88468.1| homeobox transcription factor WOX5 [Pisum sativum]
gi|372126560|gb|AEX88469.1| homeobox transcription factor WOX5 [Pisum sativum]
Length = 175
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q++ L ++ TP +IQ ++ +L+ +G+I NV+ WFQN +AR ++K
Sbjct: 21 RWNPTTEQVKHLTQLFRAGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQK 80
Query: 84 QSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPR 123
+ V + + + + + H + + +E + P R
Sbjct: 81 RRKV---SFDDDKDVIVHHRDNSMHASKQKFVEMYSEPNR 117
>gi|413951982|gb|AFW84631.1| putative homeobox DNA-binding domain superfamily protein, partial
[Zea mays]
Length = 159
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ----ISETNVYNWFQNRRAR 79
RW PT Q+ +LE +Y+ +P ++IQ + L +HG I +V+ WFQN RAR
Sbjct: 34 RWNPTKEQVAVLEGLYEHGLRSPSAEQIQQIADRLREHGHGHGAIEGKSVFYWFQNHRAR 93
Query: 80 LKRKQ 84
L++++
Sbjct: 94 LRQQR 98
>gi|116811096|emb|CAJ84170.1| WOX2B protein [Zea mays]
Length = 69
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ----ISETNVYNWFQN 75
A RW PT Q+ +LE +Y+ +P ++IQ + L +HG I +V+ WFQN
Sbjct: 1 AAAARWNPTKEQVAVLEGLYEHGLRSPSAEQIQQIADRLREHGHGHGAIEGKSVFYWFQN 60
Query: 76 RRARLKRKQ 84
RARL++++
Sbjct: 61 HRARLRQQR 69
>gi|115441115|ref|NP_001044837.1| Os01g0854500 [Oryza sativa Japonica Group]
gi|61217396|sp|Q8W0F1.1|WOX9_ORYSJ RecName: Full=WUSCHEL-related homeobox 9; AltName: Full=OsWOX9;
AltName: Full=Protein WOX5; AltName:
Full=Quiescent-specific homeobox protein
gi|18461215|dbj|BAB84412.1| putative homeodomain transcription factor [Oryza sativa Japonica
Group]
gi|56784417|dbj|BAD82456.1| putative homeodomain transcription factor [Oryza sativa Japonica
Group]
gi|113534368|dbj|BAF06751.1| Os01g0854500 [Oryza sativa Japonica Group]
gi|125528419|gb|EAY76533.1| hypothetical protein OsI_04476 [Oryza sativa Indica Group]
gi|215717078|dbj|BAG95441.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR---- 79
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73
Query: 80 -LKRKQSGVVPNNAESE 95
KR++ P++ ++
Sbjct: 74 HKKRRRGASSPDSGSND 90
>gi|312861913|gb|ADR10436.1| putative wuschel homeobox protein WOX2 [Pinus contorta]
Length = 187
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
T RW PT Q+ LE +Y + TP +I+++ + L +G I NV+ WFQN +A
Sbjct: 7 TMSTRWNPTKEQIDFLEAMYSQGIRTPSADQIEEIASRLRMYGNIEGKNVFYWFQNHKA 65
>gi|229359433|emb|CAT02937.2| putative wuschel homeobox protein WOX2 [Pinus sylvestris]
Length = 189
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
T RW PT Q+ LE +Y + TP +I+++ + L +G I NV+ WFQN +A
Sbjct: 7 TMSTRWNPTKEQIDFLEAMYSQGIRTPSADQIEEIASRLRMYGNIEGKNVFYWFQNHKA 65
>gi|422898305|dbj|BAM67021.1| protein WUSCHEL-like [Silene diclinis]
Length = 282
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 14 SGSQKLT--ARQRWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNV 69
SG L + RWTPT Q+++L+ +Y G +P +IQ + + L ++G+I NV
Sbjct: 13 SGGNCLCRQSSTRWTPTTEQIKLLKELY-YINGVRSPTADQIQAICSRLRRYGKIEGKNV 71
Query: 70 YNWFQNRRARLKRKQ 84
+ WFQN +AR ++K+
Sbjct: 72 FYWFQNHKARERQKK 86
>gi|229359331|emb|CAT02924.1| putative wuschel homeobox protein WOX1 [Amborella trichopoda]
Length = 53
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
RW PTP QL+ LE +Y TP +IQ +T +L ++G+I NV+ WF
Sbjct: 4 RWNPTPEQLRTLEEMYRRGTRTPTADQIQYITGQLRRYGKIEGKNVFYWF 53
>gi|357162515|ref|XP_003579436.1| PREDICTED: WUSCHEL-related homeobox 1A-like [Brachypodium
distachyon]
Length = 295
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y +P ++IQ + L ++G+I NV+ WFQN +AR +
Sbjct: 20 RWTPTAEQVRILRELYYGLGIRSPNAEQIQRIAGRLRQYGRIEGKNVFYWFQNHKARERH 79
Query: 83 KQ 84
K+
Sbjct: 80 KK 81
>gi|224101109|ref|XP_002312145.1| predicted protein [Populus trichocarpa]
gi|222851965|gb|EEE89512.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ 63
GN Y ASG T RW PT Q ++L ++ TP +IQ+++ L+ +G+
Sbjct: 20 GNNY-----ASG----TKCGRWNPTIEQGKLLTDLFRSGVRTPSTDEIQNISTRLSFYGK 70
Query: 64 ISETNVYNWFQNRRARLKRKQSGV 87
I NV+ WFQN +AR ++K+ V
Sbjct: 71 IESKNVFYWFQNHKARERQKRRRV 94
>gi|159232352|emb|CAM32349.1| putative wuschel homeobox protein [Zea mays]
gi|414879656|tpg|DAA56787.1| TPA: putative homeobox DNA-binding domain superfamily protein
[Zea mays]
Length = 221
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKAR 69
>gi|422898300|dbj|BAM67019.1| hypothetical protein [Silene latifolia]
Length = 282
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 14 SGSQKLT--ARQRWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNV 69
SG L + RWTPT Q+++L+ +Y G +P +IQ + + L ++G+I NV
Sbjct: 13 SGGSCLCRQSSTRWTPTTEQIKLLKELY-YINGVRSPTADQIQAICSRLRRYGKIEGKNV 71
Query: 70 YNWFQNRRARLKRKQ 84
+ WFQN +AR ++K+
Sbjct: 72 FYWFQNHKARERQKK 86
>gi|422898309|dbj|BAM67023.1| protein WUSCHEL-like [Silene dioica]
Length = 282
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RWTPT Q+++L+ +Y G +P +IQ + + L ++G+I NV+ WFQN +AR +
Sbjct: 25 RWTPTTEQIKLLKELY-YINGVRSPTADQIQAICSRLRRYGKIEGKNVFYWFQNHKARER 83
Query: 82 RKQ 84
+K+
Sbjct: 84 QKK 86
>gi|195644734|gb|ACG41835.1| WUSCHEL-related homeobox 5 [Zea mays]
Length = 220
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKAR 69
>gi|242059271|ref|XP_002458781.1| hypothetical protein SORBIDRAFT_03g040210 [Sorghum bicolor]
gi|241930756|gb|EES03901.1| hypothetical protein SORBIDRAFT_03g040210 [Sorghum bicolor]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKAR 69
>gi|326516770|dbj|BAJ96377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G + T R RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQ
Sbjct: 37 GGEPTTTRSRWAPKPEQILILESIFNSGMVNPAKDETARIRLLLERFGAVRDANVFYWFQ 96
Query: 75 N 75
N
Sbjct: 97 N 97
>gi|357131303|ref|XP_003567278.1| PREDICTED: WUSCHEL-related homeobox 9-like [Brachypodium
distachyon]
Length = 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PT Q+++L ++ TP ++IQ ++ L G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLGAFGKVESKNVFYWFQNHKAR 69
>gi|224144863|ref|XP_002325442.1| predicted protein [Populus trichocarpa]
gi|222862317|gb|EEE99823.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 23 VRSRWTPKPEQILILESIFNSGMVNPPKNETVRIRKLLEKFGSVGDANVFYWFQN 77
>gi|229359313|emb|CAT02915.1| putative wuschel homeobox protein WOX4 [Acorus calamus]
Length = 52
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
W PT Q+ ILE +Y TP +I+ +T +L+K+G+I NV+ WFQN
Sbjct: 1 WNPTVEQITILEALYKGGMHTPNATEIERITVDLSKYGRIEGKNVFYWFQN 51
>gi|89330207|emb|CAJ84162.1| WOX5B protein [Zea mays]
gi|116811070|emb|CAJ84143.1| WOX5 protein [Oryza sativa]
Length = 65
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 5 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKAR 60
>gi|89330195|emb|CAJ84156.1| WOX11/12B protein [Populus trichocarpa]
Length = 65
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 2 VRSRWTPKPEQILILESIFNSGMVNPPKNETVRIRKLLEKFGSVGDANVFYWFQN 56
>gi|255569408|ref|XP_002525671.1| Protein WUSCHEL, putative [Ricinus communis]
gi|223534971|gb|EEF36654.1| Protein WUSCHEL, putative [Ricinus communis]
Length = 261
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 24 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQN 78
>gi|356504334|ref|XP_003520951.1| PREDICTED: WUSCHEL-related homeobox 11-like [Glycine max]
Length = 295
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 29 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQN 83
>gi|224123922|ref|XP_002319197.1| predicted protein [Populus trichocarpa]
gi|224123926|ref|XP_002319198.1| predicted protein [Populus trichocarpa]
gi|222857573|gb|EEE95120.1| predicted protein [Populus trichocarpa]
gi|222857574|gb|EEE95121.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 23 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQN 77
>gi|89330193|emb|CAJ84155.1| WOX11/12A protein [Populus trichocarpa]
Length = 65
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 2 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQN 56
>gi|326497121|dbj|BAK02145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSALGKVESKNVFYWFQNHKAR 69
>gi|229359307|emb|CAT02912.1| putative wuschel homeobox protein WOX2 [Acorus calamus]
Length = 54
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
W PT Q+ +LE +Y + TP ++IQ +T L +G I NV+ WFQN +A
Sbjct: 1 WNPTKEQINLLEGLYRQGVRTPTAEQIQQITCRLRSYGPIEGKNVFYWFQNHKA 54
>gi|449437944|ref|XP_004136750.1| PREDICTED: WUSCHEL-related homeobox 11-like [Cucumis sativus]
Length = 257
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 21 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQN 75
>gi|356570353|ref|XP_003553354.1| PREDICTED: WUSCHEL-related homeobox 11-like [Glycine max]
Length = 280
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 26 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRRLLEKFGAVGDANVFYWFQN 80
>gi|116811076|emb|CAJ84146.1| WOX11/12 protein [Oryza sativa]
Length = 65
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
AR RW P P Q+ ILE +++ +P K + + L + G + + NV+ WFQN
Sbjct: 2 ARSRWAPKPEQILILESIFNSGMVSPAKDETARIRRLLERFGAVRDANVFYWFQN 56
>gi|89330197|emb|CAJ84157.1| WOX5/7A protein [Populus trichocarpa]
Length = 65
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q ++L ++ TP +IQ+++ L+ +G+I NV+ WFQN +AR ++K
Sbjct: 5 RWNPTIEQGKLLTDLFRSGVRTPSTDEIQNISTRLSFYGKIESKNVFYWFQNHKARERQK 64
Query: 84 Q 84
+
Sbjct: 65 R 65
>gi|115474147|ref|NP_001060672.1| Os07g0684900 [Oryza sativa Japonica Group]
gi|122166923|sp|Q0D3I7.1|WOX11_ORYSJ RecName: Full=WUSCHEL-related homeobox 11; AltName: Full=OsWOX11
gi|113612208|dbj|BAF22586.1| Os07g0684900 [Oryza sativa Japonica Group]
gi|215693357|dbj|BAG88739.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706892|dbj|BAG93352.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200278|gb|EEC82705.1| hypothetical protein OsI_27375 [Oryza sativa Indica Group]
gi|222637704|gb|EEE67836.1| hypothetical protein OsJ_25623 [Oryza sativa Japonica Group]
Length = 262
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 20 RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 73
>gi|326489655|dbj|BAK01808.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 17 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 71
>gi|115452769|ref|NP_001049985.1| Os03g0325600 [Oryza sativa Japonica Group]
gi|122247076|sp|Q10M29.1|WOX6_ORYSJ RecName: Full=WUSCHEL-related homeobox 6; AltName: Full=OsWOX6
gi|108707914|gb|ABF95709.1| Homeobox domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113548456|dbj|BAF11899.1| Os03g0325600 [Oryza sativa Japonica Group]
Length = 328
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>gi|160221298|sp|A2XG77.1|WOX6_ORYSI RecName: Full=WUSCHEL-related homeobox 6; AltName: Full=OsWOX6
gi|125543698|gb|EAY89837.1| hypothetical protein OsI_11385 [Oryza sativa Indica Group]
Length = 328
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>gi|195608400|gb|ACG26030.1| homeobox domain containing protein [Zea mays]
Length = 315
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 34 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 88
>gi|186509725|ref|NP_001118563.1| WUSCHEL related homeobox 11 [Arabidopsis thaliana]
gi|332640448|gb|AEE73969.1| WUSCHEL related homeobox 11 [Arabidopsis thaliana]
Length = 297
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 69 VYNWFQN 75
V+ WFQN
Sbjct: 78 VFYWFQN 84
>gi|238014208|gb|ACR38139.1| unknown [Zea mays]
Length = 315
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 34 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 88
>gi|242046976|ref|XP_002461234.1| hypothetical protein SORBIDRAFT_02g043300 [Sorghum bicolor]
gi|241924611|gb|EER97755.1| hypothetical protein SORBIDRAFT_02g043300 [Sorghum bicolor]
Length = 283
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 16 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 70
>gi|145338074|ref|NP_187016.2| WUSCHEL related homeobox 11 [Arabidopsis thaliana]
gi|342187324|sp|Q6X7J3.2|WOX11_ARATH RecName: Full=WUSCHEL-related homeobox 11
gi|332640447|gb|AEE73968.1| WUSCHEL related homeobox 11 [Arabidopsis thaliana]
Length = 268
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 69 VYNWFQN 75
V+ WFQN
Sbjct: 78 VFYWFQN 84
>gi|37955223|gb|AAP37140.1| WOX11 protein [Arabidopsis thaliana]
Length = 268
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 69 VYNWFQN 75
V+ WFQN
Sbjct: 78 VFYWFQN 84
>gi|108707915|gb|ABF95710.1| Homeobox domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|215766887|dbj|BAG99115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 356
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>gi|226497890|ref|NP_001147238.1| WUSCHEL-related homeobox 11 [Zea mays]
gi|195608920|gb|ACG26290.1| WUSCHEL-related homeobox 11 [Zea mays]
Length = 294
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 33 AARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 88
>gi|167593895|gb|ABZ85634.1| At3g03660 [Arabidopsis thaliana]
gi|167593899|gb|ABZ85636.1| At3g03660 [Arabidopsis thaliana]
Length = 214
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 9 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 68
Query: 69 VYNWFQN 75
V+ WFQN
Sbjct: 69 VFYWFQN 75
>gi|6091768|gb|AAF03478.1|AC009327_17 hypothetical protein [Arabidopsis thaliana]
Length = 199
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 69 VYNWFQN 75
V+ WFQN
Sbjct: 78 VFYWFQN 84
>gi|413917169|gb|AFW57101.1| putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 294
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 33 AARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 88
>gi|413955852|gb|AFW88501.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 399
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 118 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 172
>gi|167593893|gb|ABZ85633.1| At3g03660 [Arabidopsis thaliana]
gi|167593901|gb|ABZ85637.1| At3g03660 [Arabidopsis thaliana]
gi|167593903|gb|ABZ85638.1| At3g03660 [Arabidopsis thaliana]
gi|167593905|gb|ABZ85639.1| At3g03660 [Arabidopsis thaliana]
gi|167593915|gb|ABZ85644.1| At3g03660 [Arabidopsis thaliana]
gi|167593917|gb|ABZ85645.1| At3g03660 [Arabidopsis thaliana]
gi|167593919|gb|ABZ85646.1| At3g03660 [Arabidopsis thaliana]
Length = 214
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 9 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 68
Query: 69 VYNWFQN 75
V+ WFQN
Sbjct: 69 VFYWFQN 75
>gi|167593907|gb|ABZ85640.1| At3g03660 [Arabidopsis thaliana]
gi|167593909|gb|ABZ85641.1| At3g03660 [Arabidopsis thaliana]
gi|167593911|gb|ABZ85642.1| At3g03660 [Arabidopsis thaliana]
gi|167593913|gb|ABZ85643.1| At3g03660 [Arabidopsis thaliana]
Length = 214
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 9 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 68
Query: 69 VYNWFQN 75
V+ WFQN
Sbjct: 69 VFYWFQN 75
>gi|89330215|emb|CAJ84166.1| WOX11/12A protein [Zea mays]
gi|89330217|emb|CAJ84167.1| WOX11/12B protein [Zea mays]
Length = 65
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 2 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 56
>gi|413955853|gb|AFW88502.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
Length = 419
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 118 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 172
>gi|359481008|ref|XP_002269282.2| PREDICTED: WUSCHEL-related homeobox 11-like [Vitis vinifera]
gi|296085887|emb|CBI31211.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L +G + + NV+ WFQN
Sbjct: 16 VRSRWTPKPEQIIILESIFNSGMVNPPKDETVRIRKLLEPYGSVGDANVFYWFQN 70
>gi|229359299|emb|CAT02908.1| putative wuschel homeobox protein WOX9 [Ginkgo biloba]
Length = 54
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
RW P P Q++ILE +++ P + +I+ + +L + GQ+ + NV+ WFQ
Sbjct: 4 RWNPKPXQIRILEAIFNSGMVNPPRDEIRRIRTQLQEFGQVGDANVFYWFQ 54
>gi|413942155|gb|AFW74804.1| putative homeobox DNA-binding domain superfamily protein [Zea
mays]
Length = 231
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 34 ILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR ++K
Sbjct: 2 ILEDMYRGGLRTPNASQIQQITAHLACYGRIEGKNVFYWFQNHKARDRQK 51
>gi|302795714|ref|XP_002979620.1| hypothetical protein SELMODRAFT_419270 [Selaginella moellendorffii]
gi|300152868|gb|EFJ19509.1| hypothetical protein SELMODRAFT_419270 [Selaginella moellendorffii]
Length = 268
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAEL-AKHGQISETNVYNWFQN 75
+QRW P QL ILE Y KGTP Q+ AEL HG + E+ VY WFQN
Sbjct: 63 QQRWRPNSQQLAILEEFY--AKGTPPSQENVTEIAELIGHHGPVDESKVYYWFQN 115
>gi|380848554|emb|CBX45513.1| hypothetical protein, partial [Equisetum giganteum]
Length = 40
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
QLQILE ++D+ P K+KI++ TA+L +HG ISETNVY
Sbjct: 1 QLQILEELFDKGLVNPSKEKIKETTADLIRHGPISETNVY 40
>gi|229359321|emb|CAT02919.1| putative wuschel homeobox protein WOX2 [Amborella trichopoda]
Length = 54
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
RW PT Q+++LE +Y + TP ++IQ +T L +G I NV+ WFQ
Sbjct: 4 RWNPTKEQIEVLEGLYRQGIRTPTAEQIQQITRRLRVYGHIEGKNVFYWFQ 54
>gi|357140023|ref|XP_003571573.1| PREDICTED: WUSCHEL-related homeobox 10-like [Brachypodium
distachyon]
Length = 242
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 24 AARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 79
>gi|229359329|emb|CAT02923.1| putative wuschel homeobox protein WUS [Amborella trichopoda]
Length = 55
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 25 WTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
WTPT Q++IL E Y +P ++IQ ++A L ++G+I NV+ WFQN +A
Sbjct: 1 WTPTTEQIRILRELYYSNGVRSPTAEQIQRISARLRQYGKIEGKNVFYWFQNHKA 55
>gi|297811943|ref|XP_002873855.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319692|gb|EFH50114.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RW+P P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQN 72
>gi|115475489|ref|NP_001061341.1| Os08g0242400 [Oryza sativa Japonica Group]
gi|75294132|sp|Q6Z3L4.1|WOX10_ORYSJ RecName: Full=WUSCHEL-related homeobox 10; AltName: Full=OsWOX10;
AltName: Full=Protein WOX11/12
gi|40253638|dbj|BAD05582.1| putative homeodomain protein [Oryza sativa Japonica Group]
gi|113623310|dbj|BAF23255.1| Os08g0242400 [Oryza sativa Japonica Group]
gi|125602679|gb|EAZ42004.1| hypothetical protein OsJ_26553 [Oryza sativa Japonica Group]
Length = 284
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 40 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 94
>gi|302791776|ref|XP_002977654.1| hypothetical protein SELMODRAFT_417553 [Selaginella moellendorffii]
gi|300154357|gb|EFJ20992.1| hypothetical protein SELMODRAFT_417553 [Selaginella moellendorffii]
Length = 268
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAEL-AKHGQISETNVYNWFQN 75
+QRW P QL ILE Y KGTP Q+ AEL HG + E+ VY WFQN
Sbjct: 63 QQRWRPNSQQLGILEEFY--AKGTPPSQENVTEIAELIGHHGPVDESKVYYWFQN 115
>gi|160221293|sp|A2YST1.1|WOX10_ORYSI RecName: Full=WUSCHEL-related homeobox 10; AltName: Full=OsWOX10;
AltName: Full=Protein WOX11/12
gi|125560694|gb|EAZ06142.1| hypothetical protein OsI_28376 [Oryza sativa Indica Group]
Length = 284
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 40 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 94
>gi|302757936|ref|XP_002962391.1| hypothetical protein SELMODRAFT_451352 [Selaginella moellendorffii]
gi|300169252|gb|EFJ35854.1| hypothetical protein SELMODRAFT_451352 [Selaginella moellendorffii]
Length = 220
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
RQRW P QLQILE Y TP +I D+ + ++G + +NVY WF N+ +
Sbjct: 70 VRQRWEPNSDQLQILEEFY--ANSTPPSPEITDL---VGRYGAVDHSNVYYWFTNKNS 122
>gi|30686531|ref|NP_197283.2| WUSCHEL-related homeobox 12 [Arabidopsis thaliana]
gi|334187736|ref|NP_001190327.1| WUSCHEL-related homeobox 12 [Arabidopsis thaliana]
gi|61217632|sp|Q8GY25.1|WOX12_ARATH RecName: Full=WUSCHEL-related homeobox 12
gi|26450882|dbj|BAC42548.1| unknown protein [Arabidopsis thaliana]
gi|30017295|gb|AAP12881.1| At5g17810 [Arabidopsis thaliana]
gi|37955225|gb|AAP37141.1| WOX12 protein [Arabidopsis thaliana]
gi|332005089|gb|AED92472.1| WUSCHEL-related homeobox 12 [Arabidopsis thaliana]
gi|332005090|gb|AED92473.1| WUSCHEL-related homeobox 12 [Arabidopsis thaliana]
Length = 268
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RW+P P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQN 72
>gi|359802461|emb|CBX45508.1| hypothetical protein [Ceratopteris richardii]
Length = 591
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 24 RWTPTPAQLQILEHVYDECKG--TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
RW+PT QL+ L ++Y G TP +I +TA L +G+I NV+ WFQ+++AR +
Sbjct: 76 RWSPTTEQLRELLNIY-HIGGIRTPTTAQISSITARLRHYGRIEGRNVFYWFQDQKARER 134
Query: 82 RKQ 84
+++
Sbjct: 135 KRR 137
>gi|229359315|emb|CAT02916.1| putative wuschel homeobox protein WUS [Acorus calamus]
Length = 55
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 25 WTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
WTPT Q++IL +Y + +P ++IQ ++A L ++G+I NV+ WFQN +A
Sbjct: 1 WTPTTEQIRILRDLYYNGGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKA 55
>gi|229359311|emb|CAT02914.1| putative wuschel homeobox protein WOX5 [Acorus calamus]
Length = 50
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
W PT Q++ L ++ TP +IQ +++EL+ +G I NVYNWFQ
Sbjct: 1 WNPTVEQVRFLTDLFRSGLRTPSTDQIQRISSELSFYGHIESKNVYNWFQ 50
>gi|297833040|ref|XP_002884402.1| hypothetical protein ARALYDRAFT_477611 [Arabidopsis lyrata subsp.
lyrata]
gi|297330242|gb|EFH60661.1| hypothetical protein ARALYDRAFT_477611 [Arabidopsis lyrata subsp.
lyrata]
Length = 268
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RW+P P Q+ ILE ++ P K++ + L K G + + NV+ WFQN
Sbjct: 30 VRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQN 84
>gi|124360469|gb|ABN08479.1| Homeodomain-related [Medicago truncatula]
Length = 325
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 15 GSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GS+K R RWTP P Q+ ILE +++ P K++ + L K G + + NV+ WF
Sbjct: 18 GSEKTEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWF 77
>gi|388510020|gb|AFK43076.1| unknown [Medicago truncatula]
Length = 272
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 15 GSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GS+K R RWTP P Q+ ILE +++ P K++ + L K G + + NV+ WF
Sbjct: 18 GSEKTEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWF 77
>gi|357508903|ref|XP_003624740.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|217074296|gb|ACJ85508.1| unknown [Medicago truncatula]
gi|355499755|gb|AES80958.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 272
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 15 GSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
GS+K R RWTP P Q+ ILE +++ P K++ + L K G + + NV+ WF
Sbjct: 18 GSEKTEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWF 77
>gi|255717921|ref|XP_002555241.1| KLTH0G04686p [Lachancea thermotolerans]
gi|238936625|emb|CAR24804.1| KLTH0G04686p [Lachancea thermotolerans CBS 6340]
Length = 375
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ ++ C TP KQK AEL+K +SE + WFQN+R
Sbjct: 161 LARRKRRRTSKHELNILQSEFEIC-PTPDKQK----RAELSKRCCMSEKAIQIWFQNKRQ 215
Query: 79 RLKRKQSGV-----VPNNAESEAETVTHAESRKQNP 109
+KR+Q P+ EA TVT +R P
Sbjct: 216 SVKRQQKATSSDTSAPSTERPEAHTVTPLATRTLRP 251
>gi|449501922|ref|XP_004161495.1| PREDICTED: LOW QUALITY PROTEIN: WUSCHEL-related homeobox 11-like
[Cucumis sativus]
Length = 257
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
R RWTP P Q+ ILE +++ P K + + L K G + + N + WFQNRR
Sbjct: 21 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANXFYWFQNRR 77
>gi|9759058|dbj|BAB09580.1| unnamed protein product [Arabidopsis thaliana]
Length = 219
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RW+P P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQN 72
>gi|358255529|dbj|GAA57221.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
Length = 838
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
+AS ++ AR R T + QL ILE +D C P +D+ + LA +SE+ V
Sbjct: 221 LASENKGKKARHRTTFSVHQLSILEAAFDSCP-YPDAVTREDIASRLA----LSESRVQV 275
Query: 72 WFQNRRARLKRKQSG 86
WFQNRRA+ +++++G
Sbjct: 276 WFQNRRAKWRKQENG 290
>gi|167593897|gb|ABZ85635.1| At3g03660 [Arabidopsis thaliana]
Length = 214
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RW+P P Q+ ILE ++ P K++ + L K G + + NV+ WFQN
Sbjct: 21 VRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQN 75
>gi|167593921|gb|ABZ85647.1| At3g03660-like protein [Arabidopsis lyrata]
Length = 215
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RW+P P Q+ ILE ++ P K++ + L K G + + NV+ WFQN
Sbjct: 21 VRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQN 75
>gi|350410207|ref|XP_003488980.1| PREDICTED: homeobox protein Hox-A3-like [Bombus impatiens]
Length = 324
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 9 DPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
D F+ SG++K T R R T AQL LE ++ + R ++I ELA ++E
Sbjct: 44 DTFLISGAEKKTKRTRTAYTSAQLVELEKEFNRTRYLCRPRRI-----ELAAALSLTERQ 98
Query: 69 VYNWFQNRRARLKRKQ 84
+ WFQNRR + K+ Q
Sbjct: 99 IKIWFQNRRMKYKKDQ 114
>gi|300709018|ref|XP_002996678.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
gi|239605997|gb|EEQ83007.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
Length = 169
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
N Y+DPF + R T AQL++LE ++ C PR M +LA +
Sbjct: 22 NQYYDPFYV--------KHRKRTTKAQLKVLEKTFENC---PRPDST--MRKKLADQLSM 68
Query: 65 SETNVYNWFQNRRARLKRKQSGVV 88
+ +V WFQNRRA++K++Q V
Sbjct: 69 TPRSVQVWFQNRRAKVKKQQQSVC 92
>gi|414866554|tpg|DAA45111.1| TPA: putative homeobox DNA-binding domain superfamily protein
[Zea mays]
Length = 314
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
AR RWTP P Q+ ILE +++ P K + + L + G + + NV+ WF
Sbjct: 34 ARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWF 86
>gi|229359337|emb|CAT02927.1| putative wuschel homeobox protein WOX9B [Gnetum gnemon]
Length = 52
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
W+P P Q++ILE +++ P + +I+ + L +G + + NV+ WFQN
Sbjct: 1 WSPKPEQIRILEDLFNSGMVNPSRDEIKRIKNRLLPYGNVGDANVFYWFQN 51
>gi|302769888|ref|XP_002968363.1| hypothetical protein SELMODRAFT_451353 [Selaginella moellendorffii]
gi|300164007|gb|EFJ30617.1| hypothetical protein SELMODRAFT_451353 [Selaginella moellendorffii]
Length = 253
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 23 QRWTPTPAQLQILEHVYDECKGT-PRKQKIQDMTAELAK-HGQISETNVYNWFQNRRA 78
+RW P QL +LE +Y KGT P ++ I + + + HG +SE+ VY WFQN++A
Sbjct: 64 ERWLPNREQLAVLEDLYS--KGTMPSQENIAEAVSLVGHDHGPVSESKVYFWFQNKKA 119
>gi|229359335|emb|CAT02926.1| putative wuschel homeobox protein WOX9A [Gnetum gnemon]
Length = 52
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
RW P P Q++ILE +++ P + +I+ + L +G + + NV+ WFQ
Sbjct: 2 RWNPRPEQIRILEDLFNSGMVNPSRDEIKRIKNRLLPYGNVGDANVFYWFQ 52
>gi|410926445|ref|XP_003976689.1| PREDICTED: homeobox protein aristaless-like 3-like [Takifugu
rubripes]
Length = 190
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
AR R T AQL+ LE ++D P + + A++AKH +SE V WF+NRRAR
Sbjct: 108 ARVRTVFTDAQLRQLEALFDLTDYPPAEAR-----AQVAKHSGLSEETVRVWFKNRRARR 162
Query: 81 KRKQSGVVPNNA 92
K+++S V +++
Sbjct: 163 KQQRSAKVKSSS 174
>gi|256093000|ref|XP_002582165.1| homeobox protein aristaless-related [Schistosoma mansoni]
gi|353228797|emb|CCD74968.1| homeobox protein aristaless-related [Schistosoma mansoni]
Length = 411
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
AR R T + QL ILE +D C P +D+ ++L+ +SE+ V WFQNRRA+
Sbjct: 65 ARHRTTFSVQQLSILEAAFDNCP-YPDAVTREDIASKLS----LSESRVQVWFQNRRAKW 119
Query: 81 KRKQSGVVPNNAESEAETVT 100
++++ + N + T T
Sbjct: 120 RKQEGSQLLTNGNNSNNTCT 139
>gi|303273110|ref|XP_003055916.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462000|gb|EEH59292.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGT--PRKQKIQDMTAELAKHGQI-SETNV 69
S S+KL ++RW P QL+ LE Y + + R+ + Q + AEL+KHG+ + +
Sbjct: 147 GSNSEKLIKQKRWYPNKEQLRRLEFYYKHSRSSFKDREGRTQ-ILAELSKHGETKGQAKL 205
Query: 70 YNWFQNRRARLKRK 83
+ W NRRA+ KR+
Sbjct: 206 HTWSMNRRAKEKRQ 219
>gi|357520305|ref|XP_003630441.1| WUSCHEL-related homeobox [Medicago truncatula]
gi|355524463|gb|AET04917.1| WUSCHEL-related homeobox [Medicago truncatula]
Length = 165
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 35 LEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
+E +Y TP ++IQ +TA+L K G+I NV+ WFQN +AR ++K+
Sbjct: 93 VEELYRRGTRTPSAEQIQQITAQLRKIGKIEGKNVFYWFQNHKARERQKR 142
>gi|229359303|emb|CAT02910.1| putative wuschel homeobox protein WOX11 [Acorus calamus]
gi|229359305|emb|CAT02911.1| putative wuschel homeobox protein WOX9 [Acorus calamus]
Length = 54
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
W P P Q+ ILE +++ P K + + L K G + + NV+ WFQN +A
Sbjct: 1 WNPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNHKA 54
>gi|302765032|ref|XP_002965937.1| hypothetical protein SELMODRAFT_84885 [Selaginella moellendorffii]
gi|300166751|gb|EFJ33357.1| hypothetical protein SELMODRAFT_84885 [Selaginella moellendorffii]
Length = 192
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 23 QRWTPTPAQLQILEHVYDECKGT-PRKQKIQDMTAEL-AKHGQISETNVYNWFQNRRARL 80
+RW P QL +LE +Y KGT P ++ I ++ + HG +SE+ VY WFQN++AR
Sbjct: 73 ERWLPNREQLAVLEDLYS--KGTMPSQENIAEIVDLVDHDHGPVSESKVYFWFQNKKARE 130
Query: 81 KRKQSGVVPNNAES 94
+R++ + NA S
Sbjct: 131 RRQRRRIEEANAAS 144
>gi|357116012|ref|XP_003559779.1| PREDICTED: WUSCHEL-related homeobox 11-like [Brachypodium
distachyon]
Length = 274
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
G + R RWTP P Q+ ILE +++ P K + + L + G +++ NV+ WF
Sbjct: 18 GGGEAAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLQRFGPVADANVFYWF 76
>gi|357112415|ref|XP_003558004.1| PREDICTED: WUSCHEL-related homeobox 6-like [Brachypodium
distachyon]
Length = 326
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WF
Sbjct: 35 RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWF 86
>gi|242035881|ref|XP_002465335.1| hypothetical protein SORBIDRAFT_01g036670 [Sorghum bicolor]
gi|241919189|gb|EER92333.1| hypothetical protein SORBIDRAFT_01g036670 [Sorghum bicolor]
Length = 323
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WF
Sbjct: 35 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWF 87
>gi|357487803|ref|XP_003614189.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
gi|355515524|gb|AES97147.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
Length = 373
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 21/132 (15%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R TP QL+ LE V+ EC KQK+Q ++ ELA +S + WFQN+R + K
Sbjct: 36 RYRRPHTPNQLERLEEVFKECPKPNEKQKLQ-LSKELA----LSYGQIRFWFQNKRTQTK 90
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNPESI---QSLEDS-----APPPRDEDIYPQSPD 133
K E + AE+ K E+I ++LE+S PP + D Y
Sbjct: 91 AK--------LERNDNRLLRAENDKIRCENISMKEALENSICSSGGCPPINGDCYFDRKR 142
Query: 134 LGIDQMIGKMEI 145
L + ++ K E+
Sbjct: 143 LRFENILLKDEL 154
>gi|324536549|gb|ADY49469.1| Homeobox protein, partial [Ascaris suum]
Length = 162
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
A+G RQR T TP Q LE Y + PR ++I +A+ +SE V W
Sbjct: 49 ANGGTGSRRRQRTTFTPTQADTLEKEYLTDQYMPRTRRIL-----IAESLGLSEGQVKTW 103
Query: 73 FQNRRARLKRKQSGVVPNNAE 93
FQNRRA+ KR V +N +
Sbjct: 104 FQNRRAKEKRNDKNAVASNVQ 124
>gi|308220042|gb|ADO22593.1| ANTP class homeobox transcription factor ANTP03d [Mnemiopsis
leidyi]
Length = 258
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKG-TPRKQKIQDMTAELAKHGQISETNVYN 71
ASG R R TP+QL LE +D C TP +++ EL++ I E +
Sbjct: 183 ASGKTVKNRRSRTKFTPSQLSALETEFDLCSYITPERRR------ELSRSLAIKELAIRV 236
Query: 72 WFQNRRARLKRKQSGV 87
WFQNRR +K+KQ +
Sbjct: 237 WFQNRRTLMKKKQKNL 252
>gi|302791982|ref|XP_002977757.1| hypothetical protein SELMODRAFT_451015 [Selaginella
moellendorffii]
gi|300154460|gb|EFJ21095.1| hypothetical protein SELMODRAFT_451015 [Selaginella
moellendorffii]
Length = 152
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN-VYNWFQN 75
A+ RW P QL ILE Y + GTP Q+ D EL +H +E N VY+WFQN
Sbjct: 35 AQPRWRPNEEQLAILEDFYKQ--GTPTSQENIDTITELLRHRGPAELNKVYSWFQN 88
>gi|14588545|dbj|BAB61733.1| transcription factor ems/emx [Halocynthia roretzi]
Length = 591
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
Q+ R R TPAQL LEH +D+ G RKQ LA +++ET V WF
Sbjct: 413 QRKPKRIRTAFTPAQLLRLEHEFDKNHYVVGAERKQ--------LASSLKLTETQVKVWF 464
Query: 74 QNRRARLKRKQ 84
QNRR + KR++
Sbjct: 465 QNRRTKYKRQK 475
>gi|198419009|ref|XP_002123840.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 458
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQI 64
F +A+ Q+ R R TP QL LEH +D+ G RKQ LA + ++
Sbjct: 324 FGLLMANPFQRKPKRIRTAFTPGQLLRLEHEFDKNHYVVGAERKQ--------LANNLKL 375
Query: 65 SETNVYNWFQNRRARLKRKQ 84
+ET V WFQNRR + KR++
Sbjct: 376 TETQVKVWFQNRRTKFKRQR 395
>gi|70569371|dbj|BAE06399.1| transcription factor protein [Ciona intestinalis]
Length = 227
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQI 64
F +A+ Q+ R R TP QL LEH +D+ G RKQ LA + ++
Sbjct: 93 FGLLMANPFQRKPKRIRTAFTPGQLLRLEHEFDKNHYVVGAERKQ--------LANNLKL 144
Query: 65 SETNVYNWFQNRRARLKRKQ 84
+ET V WFQNRR + KR++
Sbjct: 145 TETQVKVWFQNRRTKFKRQR 164
>gi|148222260|ref|NP_001091390.1| homeobox protein vent1 [Xenopus laevis]
gi|82217567|sp|Q91926.1|VENT1_XENLA RecName: Full=Homeobox protein vent1; Short=Xvent-1
gi|1061303|emb|CAA63437.1| Xvent-1 [Xenopus laevis]
gi|213625103|gb|AAI69830.1| Xvent-1 protein [Xenopus laevis]
Length = 264
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
L R R TP Q+ LE +++ + G P ++K LA Q+SE V WFQNR
Sbjct: 128 LQRRLRTAFTPQQISKLEQAFNKQRYLGAPERKK-------LATSLQLSEIQVKTWFQNR 180
Query: 77 RARLKR----KQSGVVP 89
R +LKR KQ +VP
Sbjct: 181 RMKLKRQIQDKQHSLVP 197
>gi|229359325|emb|CAT02921.1| putative wuschel homeobox protein WOX5 [Amborella trichopoda]
Length = 54
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
RW PT Q+++L ++ TP ++IQ ++ L G++ NV+ WFQ
Sbjct: 4 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLGAFGKVESKNVFYWFQ 54
>gi|414588561|tpg|DAA39132.1| TPA: narrow sheath1 [Zea mays]
Length = 246
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 34 ILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 2 ILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 45
>gi|321459621|gb|EFX70672.1| hypothetical protein DAPPUDRAFT_36992 [Daphnia pulex]
Length = 74
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
+SGS K R R T T AQL LE V++ P +D LAK +SE V W
Sbjct: 7 SSGSSKKPRRNRTTFTSAQLSALEKVFERT-HYPDAFVRED----LAKRVSLSEARVQVW 61
Query: 73 FQNRRARLKRKQ 84
FQNRRA+ +R +
Sbjct: 62 FQNRRAKFRRNE 73
>gi|380848546|emb|CBX45509.1| hypothetical protein [Cyathea australis]
Length = 310
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 21 ARQRWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
A RW+PT QL+ L+ ++ E TP +I + A L HG+I NV+ W QN++A
Sbjct: 60 AGTRWSPTTEQLRELQALFHEGGMRTPTTAQISRIAARLRAHGRIEGRNVFYWSQNQKA 118
>gi|291407213|ref|XP_002720003.1| PREDICTED: divergent-paired related homeobox [Oryctolagus
cuniculus]
Length = 189
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 11 FVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
F+ K + R+R T QL+ L ++ + R D+ E+A I T V
Sbjct: 7 FLQGKYNKTSQRKRTVFTDEQLEDLNILFSKNPYPDR-----DLQVEVASKMNIDPTVVQ 61
Query: 71 NWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQ 130
WF+N RA+LKR +S VP E++ +T P+S Q+ ++ P R D YPQ
Sbjct: 62 VWFKNHRAKLKRAKSTQVPPPQEAQHQTPLEDPV---TPDSFQAPVEA--PARYHDAYPQ 116
Query: 131 S---PDLGI 136
P L I
Sbjct: 117 GLTYPHLSI 125
>gi|8547319|gb|AAF76327.1|AF261146_1 homeoprotein [Branchiostoma floridae]
Length = 289
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R TP QL LEH +++ G RKQ Q +T +SET V WFQNRR
Sbjct: 184 RVRTAFTPTQLLRLEHAFEKNHYVVGQERKQLAQQLT--------LSETQVKVWFQNRRT 235
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 236 KYKRDQ 241
>gi|260812824|ref|XP_002601120.1| empty spiracles homeobox a [Branchiostoma floridae]
gi|229286411|gb|EEN57132.1| empty spiracles homeobox a [Branchiostoma floridae]
Length = 289
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R TP QL LEH +++ G RKQ Q +T +SET V WFQNRR
Sbjct: 184 RVRTAFTPTQLLRLEHAFEKNHYVVGQERKQLAQQLT--------LSETQVKVWFQNRRT 235
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 236 KYKRDQ 241
>gi|170029587|ref|XP_001842673.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863992|gb|EDS27375.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 301
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T R R T QLQ LE + + R ++I E+A +SE + WFQNRR +
Sbjct: 109 TKRSRTAYTGIQLQALEKEFSHNRYLCRPRRI-----EIATKLGLSERQIKIWFQNRRMK 163
Query: 80 LKRKQSGVVPNNAESEAETVTHAE 103
K++ S V NN++S + E
Sbjct: 164 HKKESSAGVNNNSKSTGTNIHRKE 187
>gi|260831862|ref|XP_002610877.1| hypothetical protein BRAFLDRAFT_94870 [Branchiostoma floridae]
gi|229296246|gb|EEN66887.1| hypothetical protein BRAFLDRAFT_94870 [Branchiostoma floridae]
Length = 226
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAEL 58
RM +P P + + + R R TP+QL LEH +++ G RK Q ++
Sbjct: 100 RMQDPGNGPLLLANPFRKPKRIRTAFTPSQLLRLEHAFEKNHYVVGQERKHLAQSLS--- 156
Query: 59 AKHGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 157 -----LTETQVKVWFQNRRTKYKRDQ 177
>gi|291388523|ref|XP_002710658.1| PREDICTED: divergent-paired related homeobox [Oryctolagus
cuniculus]
gi|291414282|ref|XP_002723387.1| PREDICTED: divergent-paired related homeobox [Oryctolagus
cuniculus]
Length = 190
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 11 FVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
F+ K + R+R T QL+ L ++ + R D+ E+A I T V
Sbjct: 7 FLQGKYNKTSQRKRTVFTDEQLEDLNILFSKNPYPDR-----DLQVEVASKMNIDPTVVQ 61
Query: 71 NWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQ 130
WF+N RA+LKR +S VP E++ +T P+S Q+ + AP ED YPQ
Sbjct: 62 VWFKNHRAKLKRAKSTQVPPPQEAQHQTPLEDPV---TPDSFQAPVE-APARYPEDAYPQ 117
Query: 131 S---PDLGI 136
P L I
Sbjct: 118 GLTYPHLSI 126
>gi|222630003|gb|EEE62135.1| hypothetical protein OsJ_16922 [Oryza sativa Japonica Group]
Length = 246
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 45 TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K
Sbjct: 8 TPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 46
>gi|270008516|gb|EFA04964.1| hypothetical protein TcasGA2_TC015038 [Tribolium castaneum]
Length = 151
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 19 LTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
LT ++R TP Q+ +LE + E G RK ELAK +SE V WFQN
Sbjct: 21 LTPKKRLKYTPEQISLLESAFAENAYILGNRRK--------ELAKSTALSERQVTFWFQN 72
Query: 76 RRARLKRK 83
RR++++R+
Sbjct: 73 RRSKMRRE 80
>gi|405122863|gb|AFR97629.1| LIM-homeobox protein [Cryptococcus neoformans var. grubii H99]
Length = 813
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G + L + R TP QL++LE YD P Q + + A+L +++ NV WFQ
Sbjct: 153 GLEGLQVKHRRRTTPEQLKVLEFWYD-INPKPDNQLREQLAAQLG----MTKRNVQVWFQ 207
Query: 75 NRRARLK 81
NRRA++K
Sbjct: 208 NRRAKMK 214
>gi|391325160|ref|XP_003737107.1| PREDICTED: homeobox protein Hox-C10-like [Metaseiulus occidentalis]
Length = 334
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
++R T +QL+ILE + + R ++ E+A+ Q+SE V WFQNRR + K
Sbjct: 252 KERTAFTKSQLRILEEEFSKHNYLTRLRRF-----EIAQSLQLSERQVKVWFQNRRMKWK 306
Query: 82 RKQSGVVP 89
R ++ ++P
Sbjct: 307 RNKTCIIP 314
>gi|334322111|ref|XP_001376930.2| PREDICTED: hypothetical protein LOC100026252 [Monodelphis
domestica]
Length = 353
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 12/74 (16%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAE--LAKHGQISETNVY 70
SGSQ+ R+R + +P QLQ+LE V+ R+ D+T LA ++ E+ +
Sbjct: 203 GSGSQR---RKRTSFSPEQLQLLELVF-------RRTMYPDITLRERLATLTRLPESRIQ 252
Query: 71 NWFQNRRARLKRKQ 84
WFQNRRA+ +R++
Sbjct: 253 VWFQNRRAKSRRQR 266
>gi|197311337|gb|ACH61901.1| zerknuellt 7 [Episyrphus balteatus]
Length = 386
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T QL LE +++C R ++I +++K ++ET+V WFQNRR ++K
Sbjct: 23 RTRTAFTNVQLMELEKEFEKCIYLHRSRRI-----DISKRLSLNETHVKVWFQNRRMKIK 77
Query: 82 RKQSGVVPNNAESEAETVT 100
R + ++ N +S ++T
Sbjct: 78 R--APIIANGNKSNTSSLT 94
>gi|355713906|gb|AES04825.1| Paired mesoderm homeobox protein 2 [Mustela putorius furo]
Length = 147
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T +QLQ LE V++ + ELA+ +SE V WFQNRRA+ +
Sbjct: 1 RNRTTFNSSQLQALERVFERTHYPD-----AFVREELARRVNLSEARVQVWFQNRRAKFR 55
Query: 82 RKQSGVVPNNAES 94
R + ++ N + S
Sbjct: 56 RNERAMLANRSAS 68
>gi|58259745|ref|XP_567285.1| LIM-homeobox protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|58259747|ref|XP_567286.1| LIM-homeobox protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116748|ref|XP_773046.1| hypothetical protein CNBJ3220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255666|gb|EAL18399.1| hypothetical protein CNBJ3220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229335|gb|AAW45768.1| LIM-homeobox protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229336|gb|AAW45769.1| LIM-homeobox protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 810
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
+ L + R TP QL++LE YD P Q + + A+L +++ NV WFQNR
Sbjct: 158 EGLQVKHRRRTTPEQLKVLEFWYD-INPKPDNQLREQLAAQLG----MTKRNVQVWFQNR 212
Query: 77 RARLKRKQSGVVPNNAESEAETVTHAESRK--QNPESIQSLEDSAPPPRDEDI 127
RA++K G+ AE + ES+K +N E S +PP D +
Sbjct: 213 RAKMK----GLAKKEAEGQ-------ESKKSPENQEGTSSAIGPSPPLTDSAV 254
>gi|374108395|gb|AEY97302.1| FAER314Wp [Ashbya gossypii FDAG1]
Length = 431
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ +D+C+ TP K+K ELA ++E V WFQN+R
Sbjct: 196 LARRKRRRTSKHELTILQQEFDQCR-TPSKEK----RIELATRCNMTEKAVQIWFQNKRQ 250
Query: 79 RLKRKQ 84
+K+K+
Sbjct: 251 SMKKKR 256
>gi|26452030|dbj|BAC43105.1| putative homeodomain transcription factor [Arabidopsis thaliana]
gi|28950873|gb|AAO63360.1| At2g33880 [Arabidopsis thaliana]
Length = 305
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 46 PRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 4 PPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 41
>gi|45190916|ref|NP_985170.1| AER314Wp [Ashbya gossypii ATCC 10895]
gi|44983984|gb|AAS52994.1| AER314Wp [Ashbya gossypii ATCC 10895]
Length = 431
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ +D+C+ TP K+K ELA ++E V WFQN+R
Sbjct: 196 LARRKRRRTSKHELTILQQEFDQCR-TPSKEK----RIELATRCNMTEKAVQIWFQNKRQ 250
Query: 79 RLKRKQ 84
+K+K+
Sbjct: 251 SMKKKR 256
>gi|242020400|ref|XP_002430643.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212515815|gb|EEB17905.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 270
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNW 72
G K R R T T QL LE V++ K D + ELAK +SE V W
Sbjct: 81 GKMKKPRRNRTTFTTIQLSALERVFE-------KTHYPDAFVREELAKRVGLSEARVQVW 133
Query: 73 FQNRRARLKRKQSGVV 88
FQNRRA+ +R + ++
Sbjct: 134 FQNRRAKFRRNERSLI 149
>gi|347966251|ref|XP_321481.5| AGAP001618-PA [Anopheles gambiae str. PEST]
gi|333470145|gb|EAA01308.5| AGAP001618-PA [Anopheles gambiae str. PEST]
Length = 425
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN Y PF + + R R +P+QL LEH ++ G RKQ Q++
Sbjct: 311 GN-YLIPF------RKSKRVRTAFSPSQLLKLEHAFESNHYVVGAERKQLAQNLN----- 358
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
+SET V WFQNRR + KR Q
Sbjct: 359 ---LSETQVKVWFQNRRTKHKRMQ 379
>gi|326517046|dbj|BAJ96515.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 845
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQSG 86
TP Q++ LE +Y EC P + Q + E A + + WFQNRR R K RK+SG
Sbjct: 24 TPEQVEALERLYYECP-KPSSLRRQQLVRECAVLASVDPKQIKVWFQNRRCREKQRKESG 82
>gi|449267690|gb|EMC78603.1| Homeobox protein Nkx-3.1, partial [Columba livia]
Length = 211
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAE 103
A LAKH Q++ET V WFQNRR + KRKQ +++A AE
Sbjct: 134 ARLAKHLQLTETQVKIWFQNRRYKTKRKQIASESGGTDTDAAGHKAAE 181
>gi|123307|sp|P15142.1|HM7X_CHICK RecName: Full=Homeobox protein CHOX-7
gi|930023|emb|CAA34285.1| CHox7 protein [Gallus gallus]
Length = 124
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 13/113 (11%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMT--AELAKHGQISETNVYN 71
SG+ K + R+R T QL LE + CK K +T +++A ++SE V
Sbjct: 19 SGAGK-SRRRRTAFTSEQLLELEKEFH-CK------KYLSLTERSQIAHALKLSEVQVKI 70
Query: 72 WFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRD 124
WFQNRRA+ KR ++G V N + E V + + + +P + QSL + P P D
Sbjct: 71 WFQNRRAKWKRIKAGNVSNRS---GEPVRNPKIVRAHPGARQSLRRAQPAPAD 120
>gi|443729070|gb|ELU15122.1| hypothetical protein CAPTEDRAFT_183448 [Capitella teleta]
Length = 267
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 3 MGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELA 59
G+ + DP + + R R +P+QL LEH +++ G RK ELA
Sbjct: 159 FGHRFPDPSMLLQPFRKPKRIRTAFSPSQLLRLEHAFEKNHYVVGQERK--------ELA 210
Query: 60 KHGQISETNVYNWFQNRRARLKRKQSGVV 88
++ ++ET V WFQNRR + KR+ S V
Sbjct: 211 QNLSLTETQVKVWFQNRRTKFKRRDSSHV 239
>gi|148238046|ref|NP_001081094.1| homeobox protein Mix.2 [Xenopus laevis]
gi|3024147|sp|Q91685.1|MIX2_XENLA RecName: Full=Homeobox protein Mix.2
gi|1256257|gb|AAC60020.1| homeobox protein Mix.2 [Xenopus laevis]
Length = 369
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
NP D + S SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 82 NPEPDSSLVSASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 133
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 134 PESRIQVWFQNRRAKVRRQ 152
>gi|157109067|ref|XP_001650511.1| homeobox protein [Aedes aegypti]
gi|108879163|gb|EAT43388.1| AAEL005195-PA [Aedes aegypti]
Length = 159
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 6 PYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQIS 65
P+ F+ SG T+ R T QL LE + K R ++I E+A ++
Sbjct: 47 PHQPSFLISG----TSTGRTNFTNKQLTELEKEFHFNKYLTRARRI-----EIANSLHLN 97
Query: 66 ETNVYNWFQNRRARLKRK-QSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRD 124
ET V WFQNRR + K++ + G+VP+ E++ + H S + S++S DS R+
Sbjct: 98 ETQVKIWFQNRRMKQKKRIKEGLVPH--ETQCSSPKHVTSASMDGNSMKSTGDSNDNSRE 155
>gi|157136640|ref|XP_001663803.1| emx homeobox protein [Aedes aegypti]
gi|108880989|gb|EAT45214.1| AAEL003506-PA [Aedes aegypti]
Length = 353
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 18/84 (21%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN Y PF + + R R +P+QL LEH ++ G RKQ LA+
Sbjct: 235 GN-YLIPF------RKSKRVRTAFSPSQLLKLEHAFESNHYVVGAERKQ--------LAQ 279
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
+ +SET V WFQNRR + KR Q
Sbjct: 280 NLNLSETQVKVWFQNRRTKHKRMQ 303
>gi|229359297|emb|CAT02907.1| putative wuschel homeobox protein WOX11 [Ginkgo biloba]
Length = 50
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
W+P P Q+ ILE +++ P K + + L K G + + NV+ WFQ
Sbjct: 1 WSPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQ 50
>gi|291414337|ref|XP_002723417.1| PREDICTED: paired related homeobox 2, partial [Oryctolagus
cuniculus]
Length = 223
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T +QLQ LE V++ + D + ELA+ +SE V WFQNRRA+
Sbjct: 76 RNRTTFNSSQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 128
Query: 80 LKRKQSGVVPNNAES 94
+R + ++ N + S
Sbjct: 129 FRRNERAMLANRSAS 143
>gi|344283919|ref|XP_003413718.1| PREDICTED: ventral anterior homeobox 2-like [Loxodonta africana]
Length = 290
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 106 RTRTSFTAEQLYRLEMEFQHCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 160
Query: 82 RKQSGVVPNNAESEAE 97
+ QS + A S +E
Sbjct: 161 KDQSRDLEKRASSTSE 176
>gi|17864460|ref|NP_524825.1| E5 [Drosophila melanogaster]
gi|7299819|gb|AAF54997.1| E5 [Drosophila melanogaster]
gi|211938471|gb|ACJ13132.1| FI01131p [Drosophila melanogaster]
Length = 524
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 293 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 341
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 342 ---LTETQVKVWFQNRRTKHKRMQ 362
>gi|195500936|ref|XP_002097587.1| GE24407 [Drosophila yakuba]
gi|194183688|gb|EDW97299.1| GE24407 [Drosophila yakuba]
Length = 527
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 293 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 341
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 342 ---LTETQVKVWFQNRRTKHKRMQ 362
>gi|195449565|ref|XP_002072127.1| GK22485 [Drosophila willistoni]
gi|194168212|gb|EDW83113.1| GK22485 [Drosophila willistoni]
Length = 472
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 307 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 355
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 356 ---LTETQVKVWFQNRRTKHKRMQ 376
>gi|303290320|ref|XP_003064447.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454045|gb|EEH51352.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 599
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
RW TP Q L+ +++ P++++ ++T EL G I E NV+ WF N
Sbjct: 511 RWRATPEQRARLDELFETDDAVPKEERKSEITRELRAFGPIEERNVHFWFAN 562
>gi|170046121|ref|XP_001850627.1| emx homeobox protein [Culex quinquefasciatus]
gi|167869000|gb|EDS32383.1| emx homeobox protein [Culex quinquefasciatus]
Length = 357
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN Y PF + + R R +P+QL LEH ++ G RKQ Q++
Sbjct: 238 GN-YLIPF------RKSKRVRTAFSPSQLLKLEHAFESNHYVVGAERKQLAQNLN----- 285
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
+SET V WFQNRR + KR Q
Sbjct: 286 ---LSETQVKVWFQNRRTKHKRMQ 306
>gi|12018336|ref|NP_072159.1| ventral anterior homeobox 2 [Rattus norvegicus]
gi|62901116|sp|Q9JLZ9.1|VAX2_RAT RecName: Full=Ventral anterior homeobox 2
gi|6707842|gb|AAF25691.1| ventral anterior homeobox 2 [Rattus norvegicus]
Length = 292
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQSGVVPNNAESEA 96
+ QS + A S A
Sbjct: 159 KDQSRDLEKRASSSA 173
>gi|321258478|ref|XP_003193960.1| LIM-homeobox protein [Cryptococcus gattii WM276]
gi|317460430|gb|ADV22173.1| LIM-homeobox protein, putative [Cryptococcus gattii WM276]
Length = 811
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
+ L + R TP QL++LE YD P Q + + A+L +++ NV WFQNR
Sbjct: 158 EGLQVKHRRRTTPDQLKVLEFWYD-INPKPDNQLREQLAAQLG----MTKRNVQVWFQNR 212
Query: 77 RARLKRKQSGVVPNNAESEAETVTHAESRKQNPE----SIQSLEDSAPP 121
RA++K G+ AE E E E+ + N S+ L DSA P
Sbjct: 213 RAKMK----GLAKKEAE-EKENRKSPENTEGNSSATEPSLTPLTDSAVP 256
>gi|194901332|ref|XP_001980206.1| GG17017 [Drosophila erecta]
gi|190651909|gb|EDV49164.1| GG17017 [Drosophila erecta]
Length = 523
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 293 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 341
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 342 ---LTETQVKVWFQNRRTKHKRMQ 362
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 9 DPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISE 66
D + S K R R T T AQL LE V++ + D + ELAK ++E
Sbjct: 155 DNGIISAKSKRQRRNRTTFTTAQLDALEKVFE-------RTHYPDAFLREELAKKVDLTE 207
Query: 67 TNVYNWFQNRRARLKRKQ 84
V WFQNRRA+ +R +
Sbjct: 208 ARVQVWFQNRRAKFRRNE 225
>gi|195329140|ref|XP_002031269.1| GM25901 [Drosophila sechellia]
gi|194120212|gb|EDW42255.1| GM25901 [Drosophila sechellia]
Length = 523
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 293 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 341
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 342 ---LTETQVKVWFQNRRTKHKRMQ 362
>gi|293631903|gb|ADE59458.1| orthodenticle [Metacrinus rotundus]
Length = 271
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 3 MGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAK 60
MG P + G+Q+ R+R T T AQL +LE ++ K + D M E+A
Sbjct: 35 MGYPSMNGSFHPGTQRKQRRERTTFTRAQLDVLETLFA-------KTRYPDIFMREEVAL 87
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPES 111
+ E+ V WF+NRRA+ R+Q N +++ TV +++P S
Sbjct: 88 KISLPESRVQVWFKNRRAKC-RQQQQQQQNGGQTKTRTVKKKSPPRESPTS 137
>gi|260831860|ref|XP_002610876.1| empty spiracles homeobox B [Branchiostoma floridae]
gi|229296245|gb|EEN66886.1| empty spiracles homeobox B [Branchiostoma floridae]
Length = 275
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 11/68 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R TP+QL LEH +++ G RK Q ++ ++ET V WFQNRR
Sbjct: 162 RIRTAFTPSQLLRLEHAFEKNHYVVGQERKHLAQSLS--------LTETQVKVWFQNRRT 213
Query: 79 RLKRKQSG 86
+ KR+Q G
Sbjct: 214 KHKREQQG 221
>gi|195571045|ref|XP_002103514.1| GD20470 [Drosophila simulans]
gi|194199441|gb|EDX13017.1| GD20470 [Drosophila simulans]
Length = 526
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 294 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 342
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 343 ---LTETQVKVWFQNRRTKHKRMQ 363
>gi|308220088|gb|ADO22616.1| homeobox transcription factor HD07b [Mnemiopsis leidyi]
gi|308220176|gb|ADO22660.1| homeobox transcription factor HD07a [Mnemiopsis leidyi]
Length = 342
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
R + T QL+ LE D + P+ + + M EL+ +SET + WFQNRRAR +R
Sbjct: 182 RTSFTATQLEFLE---DRFRQNPKIDRDERM--ELSLQIGVSETAIRTWFQNRRARQRRT 236
Query: 84 QSGVVPNNAESEAETVTHAESRK 106
++ + AE AET T E K
Sbjct: 237 ET--LKKQAEQAAETGTVDEVLK 257
>gi|380848562|emb|CBX45517.1| hypothetical protein, partial [Ophioglossum lusitanicum]
Length = 40
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
QLQIL+ ++ P KQ+++ + AEL+++GQISE NVY
Sbjct: 1 QLQILDDLFARRNCFPNKQEVKHIAAELSQYGQISEANVY 40
>gi|177667009|gb|ACB73218.1| homeodomain protein GL2-like 1 [Gossypium hirsutum]
Length = 772
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 9 DPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
DP A+G + ++ TP Q+Q LE ++ EC KQ++ EL+K +
Sbjct: 79 DPTTAAGDKPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRL-----ELSKRLCLETRQ 133
Query: 69 VYNWFQNRRARLK 81
V WFQNRR ++K
Sbjct: 134 VKFWFQNRRTQMK 146
>gi|82621557|gb|ABB86450.1| EMXb-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|110339069|gb|ABG67798.1| EMXA, partial [Nematostella vectensis]
Length = 60
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R TP QL LE +D+ GT RKQ LA + ++SET V WFQNRR
Sbjct: 3 RVRTAFTPFQLLCLETSFDKNHYVVGTERKQ--------LASYLKLSETQVKVWFQNRRT 54
Query: 79 RLKRK 83
+ KR+
Sbjct: 55 KWKRQ 59
>gi|9759254|dbj|BAB09778.1| unnamed protein product [Arabidopsis thaliana]
Length = 215
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE++Y E TP +IQ +T L +G I V ++ + +
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEVGCVSPYYLQQASDHHMN 73
Query: 84 QSGVVPNN 91
Q G V N
Sbjct: 74 QHGSVYTN 81
>gi|1322001|emb|CAA66399.1| ZEN Tc [Tribolium castaneum]
Length = 251
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T AQL LE + K R ++IQ +A++ +SE + WFQNRR + K
Sbjct: 90 RARTAYTSAQLVELEREFHHGKYLSRPRRIQ-----IAENLNLSERQIKIWFQNRRMKHK 144
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSA 119
++Q V S AET + +P+S+ S SA
Sbjct: 145 KEQMNKVSTPRSSPAETASSL-----SPQSVASTASSA 177
>gi|384493559|gb|EIE84050.1| hypothetical protein RO3G_08755 [Rhizopus delemar RA 99-880]
Length = 342
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 3 MGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHG 62
M N P + + ++R TP QL ILE + TP + + +LA+
Sbjct: 1 MYNSASPPLFTTNNSADDTKKRTRVTPGQLAILEETF-SMTATPDSK----LRKQLAERL 55
Query: 63 QISETNVYNWFQNRRARLKRKQSGVVPNNAESEA 96
++ E ++ WFQNRRA++K Q V+ + EA
Sbjct: 56 KMPERSIQIWFQNRRAKVKMLQKRVLLRQEQEEA 89
>gi|345777057|ref|XP_855505.2| PREDICTED: ventral anterior homeobox 2 [Canis lupus familiaris]
Length = 212
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 26 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 80
Query: 82 RKQSGVVPNNAESEA 96
+ QS + SEA
Sbjct: 81 KDQSRDLEKRTSSEA 95
>gi|328705901|ref|XP_003242937.1| PREDICTED: hypothetical protein LOC100570786 [Acyrthosiphon pisum]
Length = 400
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTA--ELAKHGQISETNVYNWFQNRRAR 79
R R T T AQL+ LE + E D+ E+AKH +++E V WFQNRRA+
Sbjct: 150 RIRTTFTSAQLKELERAFQETH-------YPDIYTREEIAKHIELTEARVQVWFQNRRAK 202
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
++++ +++S + + A S K P+ +D P
Sbjct: 203 FRKQERLAQQKSSQSSSSSTVDATSIKTEPKQCGQSKDGKP 243
>gi|193669354|ref|XP_001948495.1| PREDICTED: homeobox protein EMX1-like [Acyrthosiphon pisum]
Length = 356
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 227 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQSLS--------LTETQVKVWFQNRRT 278
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 279 KHKRMQ 284
>gi|219560132|gb|ACL27274.1| homeodomain leucine-zipper 1 [Nicotiana benthamiana]
Length = 263
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
AR+++ T AQ +LE + + KQK ELA++ + V WFQNRRAR
Sbjct: 118 ARKKFRLTKAQSALLEESFKQHTTLNPKQK-----QELARNLNLRPRQVEVWFQNRRART 172
Query: 81 KRKQSGVVPNNAESEAETVTHAESRKQNPE 110
K KQ+ V + ET+T E+R+ + E
Sbjct: 173 KLKQTEVDCEILKKCCETLTE-ENRRLHKE 201
>gi|224105959|ref|XP_002313994.1| predicted protein [Populus trichocarpa]
gi|222850402|gb|EEE87949.1| predicted protein [Populus trichocarpa]
Length = 471
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 23 QRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
+R TPAQ+ LE+ Y+E K ++M +ELA ++E + +WF +RR + KR
Sbjct: 21 KRTVKTPAQVVALENFYNE-----HKYPTEEMKSELADQIGLTEKQISSWFCHRRLKDKR 75
Query: 83 KQSGVVPNNAESEAETV 99
+ V N + + +
Sbjct: 76 LRDEVCTNGRQDRSSGI 92
>gi|194746494|ref|XP_001955715.1| GF18902 [Drosophila ananassae]
gi|190628752|gb|EDV44276.1| GF18902 [Drosophila ananassae]
Length = 526
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 294 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 342
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 343 ---LTETQVKVWFQNRRTKHKRMQ 363
>gi|156367335|ref|XP_001627373.1| predicted protein [Nematostella vectensis]
gi|156214281|gb|EDO35273.1| predicted protein [Nematostella vectensis]
Length = 73
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R TP QL LE +D+ GT RKQ LA + ++SET V WFQNRR
Sbjct: 2 RVRTAFTPFQLLCLETSFDKNHYVVGTERKQ--------LASYLKLSETQVKVWFQNRRT 53
Query: 79 RLKRK 83
+ KR+
Sbjct: 54 KWKRQ 58
>gi|449488195|ref|XP_004175811.1| PREDICTED: homeobox protein Nkx-3.1-like [Taeniopygia guttata]
Length = 127
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQS 85
A LA+H Q++ET V WFQNRR + KRKQ+
Sbjct: 54 AHLARHLQLTETQVKIWFQNRRYKTKRKQA 83
>gi|302764372|ref|XP_002965607.1| hypothetical protein SELMODRAFT_407131 [Selaginella moellendorffii]
gi|300166421|gb|EFJ33027.1| hypothetical protein SELMODRAFT_407131 [Selaginella moellendorffii]
Length = 248
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
+QRW P QLQILE Y K TP + AEL GQ+ + VY WF N
Sbjct: 57 VQQRWEPNSYQLQILEEFY--AKATPPSPENIANIAELV--GQVDHSKVYYWFSN 107
>gi|357126818|ref|XP_003565084.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 1
[Brachypodium distachyon]
Length = 839
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQSG 86
TP Q++ LE +Y EC P + Q + E A + + WFQNRR R K R++SG
Sbjct: 20 TPEQVEALERLYYECP-KPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCREKQRRESG 78
>gi|242009481|ref|XP_002425514.1| Homeobox protein Nkx-6.1, putative [Pediculus humanus corporis]
gi|212509369|gb|EEB12776.1| Homeobox protein Nkx-6.1, putative [Pediculus humanus corporis]
Length = 447
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 330 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQSLS--------LTETQVKVWFQNRRT 381
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 382 KHKRMQ 387
>gi|112818582|ref|NP_001036813.1| zerknullt [Tribolium castaneum]
gi|13241683|gb|AAK16424.1|AF321227_4 Zen [Tribolium castaneum]
gi|270002807|gb|EEZ99254.1| zerknull [Tribolium castaneum]
Length = 246
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T AQL LE + K R ++IQ +A++ +SE + WFQNRR + K
Sbjct: 81 RARTAYTSAQLVELEREFHHGKYLSRPRRIQ-----IAENLNLSERQIKIWFQNRRMKHK 135
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSA 119
++Q V S AET + +P+S+ S SA
Sbjct: 136 KEQMNKVSTPRSSPAETASSL-----SPQSVASTASSA 168
>gi|357126820|ref|XP_003565085.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 2
[Brachypodium distachyon]
Length = 872
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQSG 86
TP Q++ LE +Y EC P + Q + E A + + WFQNRR R K R++SG
Sbjct: 20 TPEQVEALERLYYECP-KPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCREKQRRESG 78
>gi|156405507|ref|XP_001640773.1| predicted protein [Nematostella vectensis]
gi|156227909|gb|EDO48710.1| predicted protein [Nematostella vectensis]
Length = 64
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 11/61 (18%)
Query: 28 TPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP QL LE+ +++ GT RKQ LA + +SET + WFQNRR + KR+Q
Sbjct: 9 TPTQLLHLENAFEKNHYIVGTERKQ--------LASYLNLSETQIKVWFQNRRTKWKRQQ 60
Query: 85 S 85
+
Sbjct: 61 A 61
>gi|195145208|ref|XP_002013588.1| GL23326 [Drosophila persimilis]
gi|194102531|gb|EDW24574.1| GL23326 [Drosophila persimilis]
Length = 537
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 311 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQVLS----- 359
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 360 ---LTETQVKVWFQNRRTKHKRMQ 380
>gi|302757932|ref|XP_002962389.1| hypothetical protein SELMODRAFT_404134 [Selaginella moellendorffii]
gi|300169250|gb|EFJ35852.1| hypothetical protein SELMODRAFT_404134 [Selaginella moellendorffii]
Length = 312
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
+QRW P QLQILE Y K TP + AEL GQ+ + VY WF N
Sbjct: 127 VQQRWEPNSYQLQILEEFY--AKATPPSPENIANIAELV--GQVDHSKVYYWFSN 177
>gi|390178077|ref|XP_002137452.2| GA30153 [Drosophila pseudoobscura pseudoobscura]
gi|388859314|gb|EDY68010.2| GA30153 [Drosophila pseudoobscura pseudoobscura]
Length = 512
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN F PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 288 GNFLFQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQVLS----- 336
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 337 ---LTETQVKVWFQNRRTKHKRMQ 357
>gi|357159535|ref|XP_003578477.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 3
[Brachypodium distachyon]
Length = 858
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K+ Q
Sbjct: 127 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQ 178
>gi|449488199|ref|XP_004175812.1| PREDICTED: homeobox protein Nkx-3.1-like [Taeniopygia guttata]
Length = 133
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQS 85
A LA+H Q++ET V WFQNRR + KRKQ+
Sbjct: 60 AHLARHLQLTETQVKIWFQNRRYKTKRKQA 89
>gi|392597704|gb|EIW87026.1| hypothetical protein CONPUDRAFT_161643 [Coniophora puteana
RWD-64-598 SS2]
Length = 299
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+PAQL L+H++ E K P +Q+ + +E+ + V WFQNRR+ +KR+
Sbjct: 37 SPAQLNALQHLF-EIKSHPTRQERNMLASEIG----MDIKAVTTWFQNRRSAVKRRSHAW 91
Query: 88 VPNNAESEAETVTHA 102
N ++A + HA
Sbjct: 92 KENVPFTDARSQKHA 106
>gi|340727698|ref|XP_003402175.1| PREDICTED: hypothetical protein LOC100650346 [Bombus terrestris]
Length = 495
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 18 KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
K T R R T AQL +LE ++ R ++I E+A ++E + WFQNRR
Sbjct: 222 KTTKRSRTAYTSAQLVVLEKEFNGMHYLCRPRRI-----EMAASLSLTERQIKIWFQNRR 276
Query: 78 ARLKRKQSGVVPNNAESEAETV 99
+ K+ Q +N ES T
Sbjct: 277 MKHKKDQVSKAESNVESAISTA 298
>gi|195380555|ref|XP_002049036.1| GJ20984 [Drosophila virilis]
gi|194143833|gb|EDW60229.1| GJ20984 [Drosophila virilis]
Length = 288
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
++SG + R R T + AQL LE V++ + D + ELA +SE V
Sbjct: 126 LSSGHSRKPRRNRTTFSSAQLTALEKVFE-------RTHYPDAFVREELATKVHLSEARV 178
Query: 70 YNWFQNRRARLKRKQSGV 87
WFQNRRA+ +R + V
Sbjct: 179 QVWFQNRRAKFRRNERSV 196
>gi|194756178|ref|XP_001960356.1| GF13323 [Drosophila ananassae]
gi|190621654|gb|EDV37178.1| GF13323 [Drosophila ananassae]
Length = 279
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
+++G + R R T + AQL LE V++ + D + ELA +SE V
Sbjct: 113 ISAGHSRKPRRNRTTFSSAQLTALEKVFE-------RTHYPDAFVREELATKVHLSEARV 165
Query: 70 YNWFQNRRARLKRKQSGV 87
WFQNRRA+ +R + V
Sbjct: 166 QVWFQNRRAKFRRNERSV 183
>gi|444708491|gb|ELW49554.1| Homeobox protein MIXL1 [Tupaia chinensis]
Length = 253
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQS 85
TP QLQ+LE V+ R+ K D + LA + E+ + WFQNRRA+ +R+
Sbjct: 115 TPEQLQLLELVF-------RRTKYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 167
Query: 86 GVVPNNAESEAETVTHAES 104
P A E VTH+ S
Sbjct: 168 RPFPPAARPEL-FVTHSAS 185
>gi|350579710|ref|XP_003122277.3| PREDICTED: paired mesoderm homeobox protein 2-like [Sus scrofa]
Length = 381
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 212 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 264
Query: 88 VPNNAESEAETVTHAESRKQ----NPESIQ----SLEDSAP----PPRD-EDIYPQSPDL 134
+ N + S ++ + + +Q P ++ S SAP PP P +P +
Sbjct: 265 LANRSASLLKSYSQEAAIEQPVAPRPTTLSPDYLSWTASAPYSTVPPYSPGGSGPATPGV 324
Query: 135 GIDQMIGKMEIPGS-FSFHWQVDR 157
+ I + + FS H DR
Sbjct: 325 NMANSIASLRLKAKEFSLHHSQDR 348
>gi|187611422|sp|Q7Y0V7.2|ROC6_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC6; AltName:
Full=GLABRA 2-like homeobox protein 6; AltName:
Full=HD-ZIP protein ROC6; AltName: Full=Homeodomain
transcription factor ROC6; AltName: Full=Protein RICE
OUTERMOST CELL-SPECIFIC 6
Length = 872
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K+ Q
Sbjct: 130 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQ 181
>gi|313226263|emb|CBY21407.1| unnamed protein product [Oikopleura dioica]
Length = 390
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQI 64
+PF+ + + R R TPAQL LE + + G RK LAK+ +
Sbjct: 294 LNPFMNNPFLRKPKRIRTAFTPAQLMRLEQEFKKNQYVVGAERKT--------LAKNLGL 345
Query: 65 SETNVYNWFQNRRARLKRKQ 84
+ET V WFQNRR + KR++
Sbjct: 346 TETQVKVWFQNRRTKYKREK 365
>gi|403214287|emb|CCK68788.1| hypothetical protein KNAG_0B03460 [Kazachstania naganishii CBS
8797]
Length = 449
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ ++ C R+Q+ AELA+ +SE V WFQN+R
Sbjct: 198 LARRKRRRTSTQELNILQAGFEICPTPNRQQR-----AELAERCDMSEKAVQIWFQNKRQ 252
Query: 79 RLKRKQSGVVPNNAESEA 96
+KR++ NNA ++A
Sbjct: 253 SIKRQR-----NNAANKA 265
>gi|383212093|dbj|BAM08933.1| class III homeobox-leucine zipper protein [Asparagus
asparagoides]
Length = 849
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
S Q++ A + TP Q++ LE VY EC P + Q + E I + WF
Sbjct: 14 SSQQQIDAGKYVRYTPEQVEALERVYSECP-KPSSMRRQQLIRECPILSNIEPKQIKVWF 72
Query: 74 QNRRARLKRKQ 84
QNRR R K+++
Sbjct: 73 QNRRCREKQRK 83
>gi|195057533|ref|XP_001995277.1| GH23067 [Drosophila grimshawi]
gi|193899483|gb|EDV98349.1| GH23067 [Drosophila grimshawi]
Length = 285
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVY 70
+G + R R T + AQL LE V++ + D + ELA +SE V
Sbjct: 130 GTGHSRKPRRNRTTFSSAQLTALEKVFE-------RTHYPDAFVREELATKVHLSEARVQ 182
Query: 71 NWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
WFQNRRA+ +R + V E T A N +L APP
Sbjct: 183 VWFQNRRAKFRRNERSVSIGRPILETATQLVAAPIPNNMHKYPNLTHGAPP 233
>gi|56714075|gb|AAW24008.1| homeodomain protein Emx [Oikopleura dioica]
Length = 390
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQI 64
+PF+ + + R R TPAQL LE + + G RK LAK+ +
Sbjct: 294 LNPFMNNPFLRKPKRIRTAFTPAQLMRLEQEFKKNQYVVGAERKT--------LAKNLGL 345
Query: 65 SETNVYNWFQNRRARLKRKQ 84
+ET V WFQNRR + KR++
Sbjct: 346 TETQVKVWFQNRRTKYKREK 365
>gi|313245977|emb|CBY34950.1| unnamed protein product [Oikopleura dioica]
Length = 390
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 8 FDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQI 64
+PF+ + + R R TPAQL LE + + G RK LAK+ +
Sbjct: 294 LNPFMNNPFLRKPKRIRTAFTPAQLMRLEQEFKKNQYVVGAERKT--------LAKNLGL 345
Query: 65 SETNVYNWFQNRRARLKRKQ 84
+ET V WFQNRR + KR++
Sbjct: 346 TETQVKVWFQNRRTKYKREK 365
>gi|195124191|ref|XP_002006577.1| GI21136 [Drosophila mojavensis]
gi|193911645|gb|EDW10512.1| GI21136 [Drosophila mojavensis]
Length = 277
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVY 70
SG + R R T + AQL LE V++ + D + ELA +SE V
Sbjct: 118 CSGHSRKPRRNRTTFSSAQLTALEKVFE-------RTHYPDAFVREELATKVHLSEARVQ 170
Query: 71 NWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
WFQNRRA+ +R + V + T N +L SAPP
Sbjct: 171 VWFQNRRAKFRRNERSVSLGRPLLDTSTQLVPAPVPNNMHKYPNLTHSAPP 221
>gi|21902138|gb|AAM78421.1| Emx2 [Scyliorhinus canicula]
Length = 246
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 150 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 201
Query: 79 RLKRKQSGVVPNNAESEAETVTHAE-----SRKQNPESIQSLED 117
+ KR++ +A+ + + H +++ +PE I D
Sbjct: 202 KFKRQKLEEEGTDAQQKKKGTHHVNRWRLATKQSSPEEIDVTSD 245
>gi|307203496|gb|EFN82547.1| Homeotic protein empty spiracles [Harpegnathos saltator]
Length = 471
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAEL 58
R G P F+ +K R R +P+QL LEH +++ G RKQ Q ++
Sbjct: 317 RFGGPDISGFLLQPFRK-PKRIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQALS--- 372
Query: 59 AKHGQISETNVYNWFQNRRARLKR 82
++ET V WFQNRR + KR
Sbjct: 373 -----LTETQVKVWFQNRRTKHKR 391
>gi|301622984|ref|XP_002940803.1| PREDICTED: paired mesoderm homeobox protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 248
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T +QLQ LE V++ P +D LA+ +SE V WFQNRRA+ +
Sbjct: 96 RNRTTFNSSQLQALERVFERTH-YPDAFVRED----LARRVSLSEARVQVWFQNRRAKFR 150
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQ 130
R + ++ + + TH +S Q+ + Q + PR + P+
Sbjct: 151 RNERAMLA------SRSATHLKSYSQDTGAEQQVS-----PRASTLTPE 188
>gi|197311340|gb|ACH61903.1| zerknuellt 7 [Episyrphus balteatus]
Length = 387
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T QL LE +++C R ++I +++K ++ET+V WFQNRR ++K
Sbjct: 44 RTRTAFTNVQLMELEKEFEKCIYLHRSRRI-----DISKRLSLNETHVKVWFQNRRMKIK 98
Query: 82 R 82
R
Sbjct: 99 R 99
>gi|326491889|dbj|BAJ98169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514782|dbj|BAJ99752.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPN 90
Q +LE + E KQK A LA+ ++ V WFQNRRAR K KQ+ V
Sbjct: 169 QSAVLEESFKEHSTLNPKQK-----AALARQLRLRPRQVEVWFQNRRARTKLKQTEVDCE 223
Query: 91 NAESEAETVTHAESRKQNP-ESIQSLEDSAPP 121
+ + ET+T R Q + +++L+ APP
Sbjct: 224 SLKRCCETLTEENRRLQREVQELRALKLLAPP 255
>gi|308220044|gb|ADO22594.1| ANTP class homeobox transcription factor ANTP19 [Mnemiopsis leidyi]
gi|308220056|gb|ADO22600.1| ANTP class homeobox transcription factor ANTP47 [Mnemiopsis leidyi]
Length = 1583
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 40 DECKGTPRKQKIQDMTA-----ELAKHGQISETNVYNWFQNRRARLKRKQSGVV----PN 90
D+ +G RK KIQ + ELA +SET V WFQNRR + K++ G + P+
Sbjct: 844 DQLQGLERKFKIQKYLSVPERMELAGMLSLSETQVKTWFQNRRMKWKKQGLGAISSTSPH 903
Query: 91 NAESEA 96
N+ +
Sbjct: 904 NSNKNS 909
>gi|35903060|ref|NP_919390.1| ventral anterior homeobox 2 [Danio rerio]
gi|82241753|sp|Q801E1.1|VAX2_DANRE RecName: Full=Ventral anterior homeobox 2
gi|28849857|gb|AAO32142.1| homeodomain protein Vax2 [Danio rerio]
gi|190339540|gb|AAI63223.1| Ventral anterior homeobox 2 [Danio rerio]
gi|190340233|gb|AAI63225.1| Ventral anterior homeobox 2 [Danio rerio]
Length = 307
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 105 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 159
Query: 82 RKQSGVVPNNAESEAETV 99
+ Q+ + S +E++
Sbjct: 160 KDQTKDTDKRSSSTSESL 177
>gi|167004254|ref|NP_001107793.1| empty spiracles [Tribolium castaneum]
gi|162793850|emb|CAP58696.1| empty spiracles [Tribolium castaneum]
gi|270014246|gb|EFA10694.1| empty spiracles [Tribolium castaneum]
Length = 294
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 178 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQSLS--------LTETQVKVWFQNRRT 229
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 230 KHKRMQ 235
>gi|332018457|gb|EGI59047.1| Homeotic protein empty spiracle [Acromyrmex echinatior]
Length = 668
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 537 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQALS--------LTETQVKVWFQNRRT 588
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 589 KHKRMQ 594
>gi|75150173|sp|Q8GRL4.1|HOX19_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX19; AltName:
Full=HD-ZIP protein HOX19; AltName: Full=Homeodomain
transcription factor HOX19; AltName: Full=OsHox19
gi|187609449|sp|A2XE76.1|HOX19_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX19; AltName:
Full=HD-ZIP protein HOX19; AltName: Full=Homeodomain
transcription factor HOX19; AltName: Full=OsHox19
gi|27311238|gb|AAO00684.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|27356671|gb|AAO06960.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706987|gb|ABF94782.1| Homeobox associated leucine zipper family protein, expressed [Oryza
sativa Japonica Group]
gi|125542997|gb|EAY89136.1| hypothetical protein OsI_10627 [Oryza sativa Indica Group]
Length = 292
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ R++ T Q +LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 124 STRKKLRLTKEQSALLEDRFREHSTLNPKQKVA-----LAKQLNLRPRQVEVWFQNRRAR 178
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAPPP 122
K KQ+ V + ET+T R Q + +++L+ + PPP
Sbjct: 179 TKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPP 222
>gi|119904196|ref|XP_613967.3| PREDICTED: paired mesoderm homeobox protein 2 [Bos taurus]
Length = 253
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 114 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 166
Query: 88 VPNNAES 94
+ N + S
Sbjct: 167 LANRSAS 173
>gi|395540878|ref|XP_003772377.1| PREDICTED: homeobox protein Hox-A1-like [Sarcophilus harrisii]
Length = 116
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ-----S 85
QL LE + PR ++ AE+A QISET V WFQNRR + K+++
Sbjct: 39 QLTELEKEFHLQHYLPRARR-----AEMASALQISETQVKIWFQNRRMKQKKREKEGLGG 93
Query: 86 GVVPNNAES 94
G +P+NA S
Sbjct: 94 GWIPSNASS 102
>gi|365984313|ref|XP_003668989.1| hypothetical protein NDAI_0C00850 [Naumovozyma dairenensis CBS 421]
gi|343767757|emb|CCD23746.1| hypothetical protein NDAI_0C00850 [Naumovozyma dairenensis CBS 421]
Length = 457
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ ++ C TP K+K ELA+ ++S+ +V WFQN+R
Sbjct: 208 LARRKRRRTSSQELLILQTEFERC-PTPNKKK----RLELAEICKMSDKSVQIWFQNKRQ 262
Query: 79 RLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQS 114
+K+++ + +N+ + + T T +ES K + S+ S
Sbjct: 263 SVKKQKLAIAGSNS-TPSITSTASESLKLSDTSVNS 297
>gi|345489555|ref|XP_001603758.2| PREDICTED: hypothetical protein LOC100120081 [Nasonia vitripennis]
Length = 523
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + QL LE ++ + R Q+IQ +A++ ++SE + WFQNRR + K
Sbjct: 200 RSRTAYSSVQLVELEKQFNHNRYLCRPQRIQ-----MAENLKLSERQIKIWFQNRRMKFK 254
Query: 82 RKQSG 86
++QSG
Sbjct: 255 KEQSG 259
>gi|187609447|sp|A2Z0Q0.1|HOX25_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX25; AltName:
Full=HD-ZIP protein HOX25; AltName: Full=Homeodomain
transcription factor HOX25; AltName: Full=OsHox25
gi|125563531|gb|EAZ08911.1| hypothetical protein OsI_31176 [Oryza sativa Indica Group]
Length = 260
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQ-DMTAELAKHGQISETNVYNWF 73
GS AR+R T Q++ LE ++E K+K++ + +ELA+ I+ V WF
Sbjct: 15 GSSSAAARKR-RLTAEQVRALERSFEE-----EKRKLEPERKSELARRLGIAPRQVAVWF 68
Query: 74 QNRRARLKRKQ 84
QNRRAR K KQ
Sbjct: 69 QNRRARWKTKQ 79
>gi|82621589|gb|ABB86466.1| EMXa-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|110339071|gb|ABG67799.1| EMXB, partial [Nematostella vectensis]
Length = 60
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Query: 28 TPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP QL LE+ +++ GT RKQ LA + +SET + WFQNRR + KR+Q
Sbjct: 9 TPTQLLHLENAFEKNHYIVGTERKQ--------LASYLNLSETQIKVWFQNRRTKWKRQQ 60
>gi|110763992|ref|XP_001120101.1| PREDICTED: homeobox protein OTX-like [Apis mellifera]
Length = 369
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G+QK T R R T QL LE + K R ++I ELA ++E + WFQ
Sbjct: 94 GNQKKTKRSRTAYTSVQLVELEKEFTVTKYLCRPRRI-----ELAIALSLTERQIKIWFQ 148
Query: 75 NRRARLKRKQSGVVPNNA 92
NRR + K++Q NN+
Sbjct: 149 NRRMKYKKEQQQTRQNNS 166
>gi|18858805|ref|NP_571424.1| hesx homeobox 1 [Danio rerio]
gi|1762767|gb|AAB88392.1| homeodomain-containing protein [Danio rerio]
Length = 161
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + Q++ILE V+ + P D+ ELAK Q+ E + WFQNRRA+LK
Sbjct: 82 RPRTAFSSVQIKILESVF-QVNSYPGI----DIREELAKKLQLDEDRIQIWFQNRRAKLK 136
Query: 82 R 82
R
Sbjct: 137 R 137
>gi|330844803|ref|XP_003294302.1| hypothetical protein DICPUDRAFT_159280 [Dictyostelium purpureum]
gi|325075256|gb|EGC29167.1| hypothetical protein DICPUDRAFT_159280 [Dictyostelium purpureum]
Length = 486
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
+GS ++R +P QL ILE ++ E P +Q + LA +S V WF
Sbjct: 199 AGSLSSNKKKRQRTSPEQLAILEQIF-ETDKMPSQQ----IRVRLANQLGMSSRRVQIWF 253
Query: 74 QNRRARLKR 82
QN+RA++KR
Sbjct: 254 QNKRAKVKR 262
>gi|356554131|ref|XP_003545402.1| PREDICTED: uncharacterized protein LOC100803515 [Glycine max]
Length = 527
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
++R TPAQL+ LE+ Y+E K ++M LA+ ++E + WF +RR + K
Sbjct: 20 KKRKLKTPAQLKALENFYNE-----HKYPTEEMKLVLAEELGLTEKQISGWFCHRRLKDK 74
Query: 82 R-------------KQSGVVPNN----AESEAETVTHAESRKQNPESIQS 114
R + SGV+ + + + HA+ R +P+ ++S
Sbjct: 75 RLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVES 124
>gi|431898898|gb|ELK07268.1| Paired mesoderm homeobox protein 2 [Pteropus alecto]
Length = 207
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 23/139 (16%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 68 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 120
Query: 88 VPNNAESEAETVTHAESRKQ---------NPE----SIQSLEDSAPPPRDEDIYPQSPDL 134
+ N + S ++ + + +Q +P+ + S + PP P +P +
Sbjct: 121 LANRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTTSSPYSTVPPYSPGGSSPATPGV 180
Query: 135 GIDQMIGKMEIPGS-FSFH 152
+ I + + FS H
Sbjct: 181 NMANSIASLRLKAKEFSLH 199
>gi|391334688|ref|XP_003741733.1| PREDICTED: retinal homeobox protein Rx2-like [Metaseiulus
occidentalis]
Length = 229
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 39 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQSLS--------LTETQVKVWFQNRRT 90
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 91 KHKRQK 96
>gi|259013329|ref|NP_001158363.1| ventral anterior homeobox [Saccoglossus kowalevskii]
gi|32307767|gb|AAP79280.1| ventral anterior homeobox [Saccoglossus kowalevskii]
Length = 240
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 16/82 (19%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMT----AELAKHGQISETNVYNWFQNRR 77
R R + +P QL LE + Q+ Q M AELA +SET V WFQNRR
Sbjct: 149 RARTSFSPQQLYRLEREF---------QRNQYMVGRDRAELATCLHLSETQVKVWFQNRR 199
Query: 78 ARLKRKQSGVVPN---NAESEA 96
+ KR++ V + NAES A
Sbjct: 200 TKFKREKCKEVESQQRNAESMA 221
>gi|395508637|ref|XP_003758616.1| PREDICTED: ventral anterior homeobox 2a-like [Sarcophilus harrisii]
Length = 310
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|226495373|ref|NP_001151083.1| homeobox-leucine zipper protein HAT14 [Zea mays]
gi|195644164|gb|ACG41550.1| homeobox-leucine zipper protein HAT14 [Zea mays]
Length = 311
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPR-KQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
+AR++ + Q LE + E + TP KQK+ LA+ + V WFQNRRA
Sbjct: 154 SARKKLRLSKEQSAFLEESFKE-RATPNPKQKLA-----LARQLNLRARQVEVWFQNRRA 207
Query: 79 RLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPP 122
R K KQ+ V + + ET+T E+R+ + E + A PP
Sbjct: 208 RTKLKQTEVDCEHLKRCRETLT-GENRRLHKELAELRALKAVPP 250
>gi|154090886|tpe|CAL48382.1| TPA: putative DUX4 protein [Loxodonta africana]
Length = 431
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 18 KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
K R+R T +Q +L ++E + + K ELA+ + + ++ WFQNRR
Sbjct: 103 KAARRKRTAITTSQTSLLVEAFEENRYPGNEAK-----EELAQRTGLPRSRIHVWFQNRR 157
Query: 78 ARLKRKQSGVVPNNAESEAETVTHAESR---KQNPESIQSLEDSAPP 121
AR K QS P +S AE+ THA + + +P S+QS PP
Sbjct: 158 AR-KPVQSASAP--PKSLAESSTHAATLPLDQSDPSSVQSTYPLGPP 201
>gi|148223283|ref|NP_001081712.1| ventral anterior homeobox 2a [Xenopus laevis]
gi|82248156|sp|Q9PU20.1|VAX2A_XENLA RecName: Full=Ventral anterior homeobox 2a; AltName: Full=Xvax2
gi|6066778|emb|CAB58181.1| Vax2 protein [Xenopus laevis]
gi|213623667|gb|AAI70057.1| Vax2 protein [Xenopus laevis]
gi|213623673|gb|AAI70063.1| Vax2 protein [Xenopus laevis]
Length = 302
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 107 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 161
Query: 82 RKQS 85
+ QS
Sbjct: 162 KDQS 165
>gi|440894374|gb|ELR46843.1| Paired mesoderm homeobox protein 2, partial [Bos grunniens mutus]
Length = 170
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 31 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 83
Query: 88 VPNNAES 94
+ N + S
Sbjct: 84 LANRSAS 90
>gi|328779292|ref|XP_624481.3| PREDICTED: hypothetical protein LOC552099 [Apis mellifera]
Length = 449
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 318 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQALS--------LTETQVKVWFQNRRT 369
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 370 KHKRMQ 375
>gi|198456647|ref|XP_001360401.2| GA22090 [Drosophila pseudoobscura pseudoobscura]
gi|198135692|gb|EAL24976.2| GA22090 [Drosophila pseudoobscura pseudoobscura]
Length = 269
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
+++G + R R T + AQL LE V++ + D + ELA +SE V
Sbjct: 105 LSTGHSRKPRRNRTTFSSAQLTALEKVFE-------RTHYPDAFVREELATKVHLSEARV 157
Query: 70 YNWFQNRRARLKRKQSGV 87
WFQNRRA+ +R + V
Sbjct: 158 QVWFQNRRAKFRRNERSV 175
>gi|20530834|gb|AAK93792.1| homeodomain protein EmxB [Branchiostoma floridae]
Length = 275
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R TP+QL LEH +++ G RK LA ++ET V WFQNRR
Sbjct: 162 RIRTAFTPSQLLRLEHAFEKNHYVVGQERKH--------LAHSLSLTETQVKVWFQNRRT 213
Query: 79 RLKRKQSG 86
+ KR+Q G
Sbjct: 214 KHKREQQG 221
>gi|391326879|ref|XP_003737937.1| PREDICTED: homeobox protein Nkx-2.6-like [Metaseiulus occidentalis]
Length = 185
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAE 97
AELA+ ++ET V WFQNRR + KR+Q VP++ S E
Sbjct: 76 AELARSLGLTETQVKIWFQNRRYKTKRRQQTSVPDSPISPVE 117
>gi|187609463|sp|A3BYC1.2|HOX25_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX25; AltName:
Full=HD-ZIP protein HOX25; AltName: Full=Homeodomain
transcription factor HOX25; AltName: Full=OsHox25
Length = 320
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQ-DMTAELAKHGQISETNVYNWF 73
GS AR+R T Q++ LE ++E K+K++ + +ELA+ I+ V WF
Sbjct: 75 GSSSAAARKR-RLTAEQVRALERSFEE-----EKRKLEPERKSELARRLGIAPRQVAVWF 128
Query: 74 QNRRARLKRKQ 84
QNRRAR K KQ
Sbjct: 129 QNRRARWKTKQ 139
>gi|33391193|gb|AAQ17211.1| paired and homeobox transcription factor [Tripedalia cystophora]
Length = 527
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTA--ELAKHGQISETNVYNWFQNRRAR 79
+ R+ TP Q +LE +++ K D T E+AK +SE V WF NRRA+
Sbjct: 246 KNRYNFTPEQTDLLEQLFE-------KTPYPDATTREEIAKKTNLSEARVQVWFSNRRAK 298
Query: 80 LKRKQSG 86
++++ G
Sbjct: 299 MRKQDGG 305
>gi|157427974|ref|NP_001098894.1| hematopoietically-expressed homeobox protein HHEX [Bos taurus]
gi|157278997|gb|AAI34633.1| HHEX protein [Bos taurus]
gi|296472709|tpg|DAA14824.1| TPA: hematopoietically expressed homeobox [Bos taurus]
Length = 271
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRK------QNPES 111
LAK Q+SE V WFQNRRA+ +R + NN + E E++ ++ ++ QN +
Sbjct: 172 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPQNNKKEELESLDNSCDQRQDLPSDQNTGA 231
Query: 112 IQSLEDSAPPPRDEDI 127
++S + S P ED+
Sbjct: 232 LESSQCSPSPVSQEDL 247
>gi|363740620|ref|XP_415476.3| PREDICTED: paired mesoderm homeobox protein 2 [Gallus gallus]
Length = 247
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVP 89
+QLQ LE V++ + ELA+ +SE V WFQNRRA+ +R + ++
Sbjct: 108 SQLQALERVFERTH-----YPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 162
Query: 90 NNAES 94
N + S
Sbjct: 163 NRSAS 167
>gi|332211901|ref|XP_003255057.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein EMX2 [Nomascus
leucogenys]
Length = 252
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 156 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 207
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 208 KFKRQK 213
>gi|326930336|ref|XP_003211303.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2-like [Meleagris gallopavo]
Length = 247
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 108 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 160
Query: 88 VPNNAES 94
+ N + S
Sbjct: 161 LANRSAS 167
>gi|164665012|gb|ABY65934.1| homeodomain-containing protein HEX [Bos taurus]
Length = 103
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQ---S 114
LAK Q+SE V WFQNRRA+ +R + NN + E E++ ++ ++Q+ S Q +
Sbjct: 31 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPQNNKKEELESLDNSCDQRQDLPSDQNTGA 90
Query: 115 LEDSAPPP 122
LE S P
Sbjct: 91 LESSQCSP 98
>gi|426223883|ref|XP_004006103.1| PREDICTED: LOW QUALITY PROTEIN: ventral anterior homeobox 2 [Ovis
aries]
Length = 259
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 101 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 155
Query: 82 RKQS 85
+ QS
Sbjct: 156 KDQS 159
>gi|301764333|ref|XP_002917588.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein EMX2-like
[Ailuropoda melanoleuca]
Length = 307
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 211 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 262
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 263 KFKRQK 268
>gi|165979109|gb|ABY77000.1| Bapx1 [Petromyzon marinus]
Length = 241
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNA 92
A+LA +++ET V WFQNRR + KR+Q G+ P A
Sbjct: 172 ADLAAALKLTETQVKIWFQNRRYKAKRRQLGLGPAGA 208
>gi|345329605|ref|XP_001512907.2| PREDICTED: hypothetical protein LOC100082215 [Ornithorhynchus
anatinus]
Length = 419
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAE--LAKHGQISETNVY 70
A+ SQ+ R+R + +P QLQ+LE V+ R+ D+ LA Q+ E+ +
Sbjct: 268 AASSQR---RKRTSFSPEQLQLLELVF-------RRTMYPDINLRDRLAALTQLPESRIQ 317
Query: 71 NWFQNRRARLKRKQ 84
WFQNRRA+ +R++
Sbjct: 318 VWFQNRRAKSRRQK 331
>gi|89266847|emb|CAJ82557.1| homeodomain containing protein mix [Xenopus (Silurana) tropicalis]
Length = 357
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
NP D + SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 75 NPVPDASLLPASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 126
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 127 PESRIQVWFQNRRAKVRRQ 145
>gi|340725585|ref|XP_003401149.1| PREDICTED: hypothetical protein LOC100642539 [Bombus terrestris]
Length = 447
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 315 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQALS--------LTETQVKVWFQNRRT 366
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 367 KHKRMQ 372
>gi|45360969|ref|NP_988848.1| Mix paired-like homeobox [Xenopus (Silurana) tropicalis]
gi|26224746|gb|AAN76332.1| paired-like homeodomain transcription factor Mix [Xenopus
(Silurana) tropicalis]
Length = 357
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
NP D + SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 75 NPVPDASLLPASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 126
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 127 PESRIQVWFQNRRAKVRRQ 145
>gi|388452312|dbj|BAM15951.1| empty spiracles, partial [Bombyx mori]
Length = 103
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 24 RWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
R +P+QL LEH +++ G RKQ LA+ ++ET V WFQNRR +
Sbjct: 1 RTAFSPSQLLKLEHAFEKNHYVVGAERKQ--------LAQALSLTETQVKVWFQNRRTKH 52
Query: 81 KRKQ 84
KR Q
Sbjct: 53 KRMQ 56
>gi|301618062|ref|XP_002938442.1| PREDICTED: ventral anterior homeobox 2a-like [Xenopus (Silurana)
tropicalis]
Length = 299
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|307187352|gb|EFN72480.1| Homeotic protein empty spiracles [Camponotus floridanus]
Length = 481
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 352 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQTLS--------LTETQVKVWFQNRRT 403
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 404 KHKRMQ 409
>gi|195429318|ref|XP_002062710.1| GK19597 [Drosophila willistoni]
gi|194158795|gb|EDW73696.1| GK19597 [Drosophila willistoni]
Length = 288
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
+++G + R R T + AQL LE V++ + D + ELA +SE V
Sbjct: 105 LSTGHSRKPRRNRTTFSSAQLTALEKVFE-------RTHYPDAFVREELATKVHLSEARV 157
Query: 70 YNWFQNRRARLKRKQSGV 87
WFQNRRA+ +R + V
Sbjct: 158 QVWFQNRRAKFRRNERSV 175
>gi|195149884|ref|XP_002015885.1| GL11298 [Drosophila persimilis]
gi|194109732|gb|EDW31775.1| GL11298 [Drosophila persimilis]
Length = 269
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
+++G + R R T + AQL LE V++ + D + ELA +SE V
Sbjct: 105 LSTGHSRKPRRNRTTFSSAQLTALEKVFE-------RTHYPDAFVREELATKVHLSEARV 157
Query: 70 YNWFQNRRARLKRKQSGV 87
WFQNRRA+ +R + V
Sbjct: 158 QVWFQNRRAKFRRNERSV 175
>gi|16549686|dbj|BAB70842.1| unnamed protein product [Homo sapiens]
Length = 252
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 156 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 207
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 208 KFKRQK 213
>gi|327277572|ref|XP_003223538.1| PREDICTED: homeobox protein EMX2-like [Anolis carolinensis]
Length = 374
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ ++ ++ET V WFQNRR
Sbjct: 278 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLS--------LTETQVKVWFQNRRT 329
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 330 KFKRQK 335
>gi|213627342|gb|AAI71150.1| mix1 homeobox [Xenopus (Silurana) tropicalis]
Length = 357
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
NP D + SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 75 NPVPDASLLPASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 126
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 127 PESRIQVWFQNRRAKVRRQ 145
>gi|125585491|gb|EAZ26155.1| hypothetical protein OsJ_10021 [Oryza sativa Japonica Group]
Length = 502
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 20 TARQRWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
+ R++ T Q +LE + D K P KQK+ LAK + V WFQNRRA
Sbjct: 334 STRKKLRLTKEQSALLEDRFPDHSKLNP-KQKVA-----LAKQLNLRPRQVEVWFQNRRA 387
Query: 79 RLKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAPPP 122
R K KQ+ V + ET+T R Q + +++L+ + PPP
Sbjct: 388 RTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPP 432
>gi|14010241|gb|AAK51913.1|AF361329_1 deformed [Folsomia candida]
Length = 163
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 11 FVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVY 70
FV SGS T RQR T Q+ LE + + R+++I E+A +SE +
Sbjct: 23 FVISGSSLDTKRQRTAYTRHQILELEKEFHYNRYLTRRRRI-----EIAHSLVLSERQIK 77
Query: 71 NWFQNRRARLKRKQSGVVPN 90
WFQNRR +K K+ +PN
Sbjct: 78 IWFQNRR--MKYKKDNKLPN 95
>gi|288557300|ref|NP_001165675.1| ventral anterior homeobox 2b [Xenopus laevis]
gi|82247682|sp|Q9IAX9.1|VAX2B_XENLA RecName: Full=Ventral anterior homeobox 2b; AltName: Full=Ventral
anterior homeobox 3
gi|6707844|gb|AAF25692.1| ventral anterior homeobox 3 [Xenopus laevis]
Length = 294
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 100 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 154
Query: 82 RKQS 85
+ QS
Sbjct: 155 KDQS 158
>gi|359070691|ref|XP_002691720.2| PREDICTED: paired mesoderm homeobox protein 2 [Bos taurus]
Length = 252
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 113 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 165
Query: 88 VPNNAES 94
+ N + S
Sbjct: 166 LANRSAS 172
>gi|242049914|ref|XP_002462701.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
gi|241926078|gb|EER99222.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
Length = 872
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 131 TPQQIQELEAVFKECPHPDEKQRM-----ELSKRLNLESRQVKFWFQNRRTQMK 179
>gi|166796114|gb|AAI58894.1| mix1 homeobox [Xenopus (Silurana) tropicalis]
Length = 357
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
NP D + SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 75 NPVPDASLLPASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 126
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 127 PESRIQVWFQNRRAKVRRQ 145
>gi|359483940|ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 1
[Vitis vinifera]
gi|147820218|emb|CAN73584.1| hypothetical protein VITISV_033098 [Vitis vinifera]
gi|297740817|emb|CBI30999.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 22 TPEQVEALERVYSECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
>gi|395844588|ref|XP_003795040.1| PREDICTED: paired mesoderm homeobox protein 2 [Otolemur garnettii]
Length = 265
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 126 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 178
Query: 88 VPNNAES 94
+ N + S
Sbjct: 179 LANRSAS 185
>gi|198282059|ref|NP_001128284.1| empty spiracles homeobox 2 [Xenopus (Silurana) tropicalis]
gi|197246291|gb|AAI69182.1| emx2 protein [Xenopus (Silurana) tropicalis]
Length = 247
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|118093051|ref|XP_421783.2| PREDICTED: homeobox protein EMX2 [Gallus gallus]
Length = 247
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|297726893|ref|NP_001175810.1| Os09g0379600 [Oryza sativa Japonica Group]
gi|255678854|dbj|BAH94538.1| Os09g0379600 [Oryza sativa Japonica Group]
Length = 286
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQ-DMTAELAKHGQISETNVYNWF 73
GS AR+R T Q++ LE ++E K+K++ + +ELA+ I+ V WF
Sbjct: 41 GSSSAAARKR-RLTAEQVRALERSFEE-----EKRKLEPERKSELARRLGIAPRQVAVWF 94
Query: 74 QNRRARLKRKQ 84
QNRRAR K KQ
Sbjct: 95 QNRRARWKTKQ 105
>gi|383851796|ref|XP_003701417.1| PREDICTED: uncharacterized protein LOC100876009 [Megachile
rotundata]
Length = 377
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 243 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQALS--------LTETQVKVWFQNRRT 294
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 295 KHKRMQ 300
>gi|10121091|dbj|BAB13506.1| homeoprotein LjEMX [Lethenteron camtschaticum]
Length = 276
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA +SET V WFQNRR
Sbjct: 180 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LASSLSLSETQVKVWFQNRRT 231
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 232 KYKRQK 237
>gi|449276188|gb|EMC84839.1| Homeobox protein EMX2 [Columba livia]
Length = 247
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|281349486|gb|EFB25070.1| hypothetical protein PANDA_003237 [Ailuropoda melanoleuca]
Length = 170
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 31 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 83
Query: 88 VPNNAES 94
+ N + S
Sbjct: 84 LANRSAS 90
>gi|70608219|gb|AAZ04405.1| mix [Xenopus (Silurana) tropicalis]
Length = 357
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
NP D + SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 75 NPVPDASLLPASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 126
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 127 PESRIQVWFQNRRAKVRRQ 145
>gi|195055682|ref|XP_001994742.1| GH17404 [Drosophila grimshawi]
gi|193892505|gb|EDV91371.1| GH17404 [Drosophila grimshawi]
Length = 540
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 315 GNFLLQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 363
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 364 ---LTETQVKVWFQNRRTKHKRMQ 384
>gi|115496181|ref|NP_001069313.1| homeobox protein EMX2 [Bos taurus]
gi|122144673|sp|Q17R00.1|EMX2_BOVIN RecName: Full=Homeobox protein EMX2; AltName: Full=Empty spiracles
homolog 2; AltName: Full=Empty spiracles-like protein 2
gi|109658176|gb|AAI18095.1| Empty spiracles homeobox 2 [Bos taurus]
gi|296472614|tpg|DAA14729.1| TPA: homeobox protein EMX2 [Bos taurus]
Length = 253
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 157 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 208
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 209 KFKRQK 214
>gi|395506283|ref|XP_003757464.1| PREDICTED: paired mesoderm homeobox protein 2 [Sarcophilus
harrisii]
Length = 243
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 104 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 156
Query: 88 VPNNAES 94
+ N + S
Sbjct: 157 LANRSAS 163
>gi|366996342|ref|XP_003677934.1| hypothetical protein NCAS_0H02770 [Naumovozyma castellii CBS 4309]
gi|342303804|emb|CCC71587.1| hypothetical protein NCAS_0H02770 [Naumovozyma castellii CBS 4309]
Length = 413
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ +++C TP KQ + ELAK +++ V WFQN+R
Sbjct: 182 LARRKRRRTSSHELSILQAEFEKC-STPSKQ----VRLELAKRCSMTDKAVQIWFQNKRQ 236
Query: 79 RLKR 82
+KR
Sbjct: 237 SMKR 240
>gi|301758840|ref|XP_002915282.1| PREDICTED: paired mesoderm homeobox protein 2-like [Ailuropoda
melanoleuca]
Length = 202
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 63 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 115
Query: 88 VPNNAES 94
+ N + S
Sbjct: 116 LANRSAS 122
>gi|126297823|ref|XP_001369196.1| PREDICTED: paired mesoderm homeobox protein 2-like [Monodelphis
domestica]
Length = 262
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 123 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 175
Query: 88 VPNNAES 94
+ N + S
Sbjct: 176 LANRSAS 182
>gi|410979364|ref|XP_003996055.1| PREDICTED: paired mesoderm homeobox protein 2 [Felis catus]
Length = 204
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 65 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 117
Query: 88 VPNNAES 94
+ N + S
Sbjct: 118 LANRSAS 124
>gi|359483942|ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 2
[Vitis vinifera]
Length = 859
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 22 TPEQVEALERVYSECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
>gi|431895405|gb|ELK04921.1| Homeobox protein EMX2 [Pteropus alecto]
Length = 253
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 157 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 208
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 209 KFKRQK 214
>gi|395827999|ref|XP_003787174.1| PREDICTED: homeobox protein EMX2 [Otolemur garnettii]
Length = 252
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 156 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 207
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 208 KFKRQK 213
>gi|345498467|ref|XP_001601482.2| PREDICTED: hypothetical protein LOC100117163 [Nasonia vitripennis]
Length = 531
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
S S K + R + AQ+ LE +D + ++ A+LA+ +++ET V WF
Sbjct: 353 SNSMKRKKKTRTVFSRAQVFQLESTFDIKRYLSSSER-----AQLAQSLRLTETQVKIWF 407
Query: 74 QNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPR-DEDIYPQSP 132
QNRR + KR+ + AE E ++ HA+ + P I E S PP + PQ+P
Sbjct: 408 QNRRNKWKRQLA------AELETNSIVHAQRLVRVP--ILYHEASVPPSSIGSSVGPQAP 459
>gi|345193173|tpg|DAA34952.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
gi|414886368|tpg|DAA62382.1| TPA: outer cell layer3 [Zea mays]
Length = 863
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 128 TPQQIQELEAVFKECPHPDEKQRM-----ELSKRLNLESRQVKFWFQNRRTQMK 176
>gi|119964700|ref|NP_034262.2| homeobox protein EMX2 [Mus musculus]
gi|157821339|ref|NP_001102639.1| homeobox protein EMX2 [Rattus norvegicus]
gi|73998900|ref|XP_853333.1| PREDICTED: homeobox protein EMX2 isoform 2 [Canis lupus familiaris]
gi|291404887|ref|XP_002718727.1| PREDICTED: empty spiracles homeobox 2 [Oryctolagus cuniculus]
gi|408360285|sp|Q04744.3|EMX2_MOUSE RecName: Full=Homeobox protein EMX2; AltName: Full=Empty spiracles
homolog 2; AltName: Full=Empty spiracles-like protein 2
gi|146327286|gb|AAI41563.1| Empty spiracles homolog 2 (Drosophila) [synthetic construct]
gi|148669879|gb|EDL01826.1| empty spiracles homolog 2 (Drosophila) [Mus musculus]
gi|149040522|gb|EDL94560.1| similar to empty spiracles-like protein 2 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 253
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 157 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 208
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 209 KFKRQK 214
>gi|348520142|ref|XP_003447588.1| PREDICTED: ventral anterior homeobox 2-like [Oreochromis niloticus]
Length = 307
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 100 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 154
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQS 131
+ + + S +E++ + E + L APPP + + P S
Sbjct: 155 KDTTKDSDKRSSSTSESLATCNILRLL-EQGRLLSGPAPPPPNSLLGPPS 203
>gi|344274701|ref|XP_003409153.1| PREDICTED: homeobox protein EMX2-like [Loxodonta africana]
Length = 254
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 158 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 209
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 210 KFKRQK 215
>gi|14149611|ref|NP_004089.1| homeobox protein EMX2 isoform 1 [Homo sapiens]
gi|388453993|ref|NP_001253068.1| homeobox protein EMX2 [Macaca mulatta]
gi|114632972|ref|XP_001152098.1| PREDICTED: homeobox protein EMX2 isoform 1 [Pan troglodytes]
gi|296221316|ref|XP_002756676.1| PREDICTED: homeobox protein EMX2 [Callithrix jacchus]
gi|397510598|ref|XP_003825681.1| PREDICTED: homeobox protein EMX2 [Pan paniscus]
gi|402881606|ref|XP_003904358.1| PREDICTED: homeobox protein EMX2 [Papio anubis]
gi|426366329|ref|XP_004050212.1| PREDICTED: homeobox protein EMX2 isoform 1 [Gorilla gorilla
gorilla]
gi|19862512|sp|Q04743.2|EMX2_HUMAN RecName: Full=Homeobox protein EMX2; AltName: Full=Empty spiracles
homolog 2; AltName: Full=Empty spiracles-like protein 2
gi|15321590|gb|AAK95496.1|AF301598_1 empty spiracles-like protein [Homo sapiens]
gi|13276773|emb|CAB82104.1| hypothetical protein [Homo sapiens]
gi|119569810|gb|EAW49425.1| empty spiracles homolog 2 (Drosophila) [Homo sapiens]
gi|157169614|gb|AAI52826.1| Empty spiracles homeobox 2 [synthetic construct]
gi|208966208|dbj|BAG73118.1| empty spiracles homeobox 2 [synthetic construct]
gi|387539940|gb|AFJ70597.1| homeobox protein EMX2 isoform 1 [Macaca mulatta]
gi|410223350|gb|JAA08894.1| empty spiracles homeobox 2 [Pan troglodytes]
gi|410223352|gb|JAA08895.1| empty spiracles homeobox 2 [Pan troglodytes]
gi|410304792|gb|JAA30996.1| empty spiracles homeobox 2 [Pan troglodytes]
gi|410304796|gb|JAA30998.1| empty spiracles homeobox 2 [Pan troglodytes]
gi|410337751|gb|JAA37822.1| empty spiracles homeobox 2 [Pan troglodytes]
gi|410337753|gb|JAA37823.1| empty spiracles homeobox 2 [Pan troglodytes]
Length = 252
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 156 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 207
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 208 KFKRQK 213
>gi|47210507|emb|CAF90146.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|260829651|ref|XP_002609775.1| retinal homeobox protein-like protein [Branchiostoma floridae]
gi|229295137|gb|EEN65785.1| retinal homeobox protein-like protein [Branchiostoma floridae]
Length = 320
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
V+SG R R T T Q+ LE YD TP M ELA +++E +
Sbjct: 138 VSSGKMCRPRRNRTTFTTFQIHELELAYDR---TPYPD--LSMREELANKLELTEARIQV 192
Query: 72 WFQNRRARLKRKQ 84
WFQNRRA+ +R++
Sbjct: 193 WFQNRRAKTRRQE 205
>gi|194205849|ref|XP_001917247.1| PREDICTED: LOW QUALITY PROTEIN: hematopoietically-expressed
homeobox protein HHEX-like [Equus caballus]
Length = 286
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQ---S 114
LAK Q+SE V WFQNRRA+ +R + +N + E E++ +A ++Q+ S Q +
Sbjct: 187 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSNKKEELESLDNACDQRQDLPSEQNEGA 246
Query: 115 LEDSAPPP 122
L+ S PP
Sbjct: 247 LDSSQCPP 254
>gi|147904461|ref|NP_001086052.1| empty spiracles homeobox 2 [Xenopus laevis]
gi|49257830|gb|AAH74130.1| MGC81839 protein [Xenopus laevis]
Length = 245
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 149 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLNLTETQVKVWFQNRRT 200
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 201 KFKRQK 206
>gi|449510396|ref|XP_004163652.1| PREDICTED: WUSCHEL-related homeobox 5-like [Cucumis sativus]
Length = 178
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI-----------SETNVYNW 72
RW PT Q+ ILE++Y + TP +IQ +T L +G I ++ +Y
Sbjct: 22 RWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEVVCSPYYVHQNDVGLYPQ 81
Query: 73 FQNRRARLKRKQSGVVPNNAESE 95
+QN + + G+V ++SE
Sbjct: 82 YQNNSMVI--QSGGIVKKRSKSE 102
>gi|432906511|ref|XP_004077566.1| PREDICTED: homeobox protein EMX2 [Oryzias latipes]
Length = 247
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|426253162|ref|XP_004020269.1| PREDICTED: homeobox protein EMX2 isoform 1 [Ovis aries]
Length = 252
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 156 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 207
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 208 KFKRQK 213
>gi|435419|gb|AAA03627.1| PAX-3-FKHR gene fusion, partial [Homo sapiens]
Length = 689
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T T QL+ LEHV E P + ELA+ +++E V WF NRRAR
Sbjct: 73 RSRTTFTAEQLEELEHVAFERTHYPDIYTRE----ELAQRAKLTEARVQVWFSNRRARW- 127
Query: 82 RKQSGV 87
RKQ+G
Sbjct: 128 RKQAGA 133
>gi|242276438|gb|ACS91460.1| EmxA [Petromyzon marinus]
Length = 274
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA +SET V WFQNRR
Sbjct: 178 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LASSLSLSETQVKVWFQNRRT 229
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 230 KYKRQK 235
>gi|126273061|ref|XP_001368074.1| PREDICTED: homeobox protein EMX2 [Monodelphis domestica]
Length = 248
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 152 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 203
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 204 KFKRQK 209
>gi|312371612|gb|EFR19750.1| hypothetical protein AND_21856 [Anopheles darlingi]
Length = 234
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
SGS K R R + T Q+ LE +++ + ELAK +SE V WF
Sbjct: 43 SGSSKKPRRTRTSFTSQQILALEKIFERTH-----YPDAFVREELAKENSLSEARVQVWF 97
Query: 74 QNRRARLKRKQ 84
QNRRA+ +R +
Sbjct: 98 QNRRAKFRRNE 108
>gi|109103296|ref|XP_001100565.1| PREDICTED: ventral anterior homeobox 2 [Macaca mulatta]
Length = 290
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|28202243|gb|AAM94018.1| empty spiracles-like protein 2 [Mus musculus]
Length = 253
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 157 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 208
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 209 KFKRQK 214
>gi|444721230|gb|ELW61974.1| Paired mesoderm homeobox protein 2 [Tupaia chinensis]
Length = 195
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 56 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 108
Query: 88 VPNNAES 94
+ N + S
Sbjct: 109 LANRSAS 115
>gi|348587216|ref|XP_003479364.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein EMX2-like [Cavia
porcellus]
Length = 253
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 157 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 208
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 209 KFKRQK 214
>gi|1089816|dbj|BAA06913.1| emx2 homeoprotein [Danio rerio]
Length = 247
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|344255035|gb|EGW11139.1| Ventral anterior homeobox 2 [Cricetulus griseus]
Length = 210
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 26 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 80
Query: 82 RKQS 85
+ QS
Sbjct: 81 KDQS 84
>gi|149634640|ref|XP_001514550.1| PREDICTED: homeobox protein EMX2 [Ornithorhynchus anatinus]
Length = 249
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 153 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 204
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 205 KFKRQK 210
>gi|162462506|ref|NP_001105125.1| outer cell layer3 [Zea mays]
gi|8920423|emb|CAB96423.1| OCL3 protein [Zea mays]
Length = 863
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 128 TPQQIQELEAVFKECPHPDEKQRM-----ELSKRLNLESRQVKFWFQNRRTQMK 176
>gi|449266756|gb|EMC77772.1| Paired mesoderm homeobox protein 2, partial [Columba livia]
Length = 165
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 26 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 78
Query: 88 VPNNAES 94
+ N + S
Sbjct: 79 LANRSAS 85
>gi|312071081|ref|XP_003138443.1| hypothetical protein LOAG_02858 [Loa loa]
gi|307766387|gb|EFO25621.1| hypothetical protein LOAG_02858 [Loa loa]
Length = 151
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R+R T QL +LE+ + +C+ P+ D ELA Q+ E + WF+NRRA+ +
Sbjct: 43 RRRTAFTDEQLTLLENAFQKCQY-PK----MDTRMELASETQLPEMRIQIWFKNRRAKYR 97
Query: 82 RKQSGVVPNNAESEAETVTHA 102
+K + N A E + T+
Sbjct: 98 KK----LRNTANPEITSSTYV 114
>gi|296479308|tpg|DAA21423.1| TPA: Mix-like homeobox protein 1-like [Bos taurus]
Length = 267
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
V+S SQ+ R+R + P QLQ+LE V+ R+ D + LA + E+ +
Sbjct: 86 VSSASQR---RKRTSFRPEQLQLLELVF-------RRTMYPDIHLRERLAALTLLPESRI 135
Query: 70 YNWFQNRRARLKRKQSG 86
WFQNRRA+ R+QSG
Sbjct: 136 QVWFQNRRAK-SRRQSG 151
>gi|76563880|gb|ABA46370.1| goosecoid-like protein [Nematostella vectensis]
Length = 210
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL++LE + +K D + ELA + E V WF+NRRA+
Sbjct: 75 RHRTIFTEEQLELLETTF-------QKTHYPDVLLREELAMKVDLKEERVEVWFKNRRAK 127
Query: 80 LKRKQSGVVPNNAESEAETVTHAES--RKQNPESIQSLEDSAPP 121
++++ V + +E + + A+S ++NPE +S+E + P
Sbjct: 128 WRKQKREAVDSKKANEEDLLQQADSPLTEENPEMCESIEKPSSP 171
>gi|359483944|ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 3
[Vitis vinifera]
Length = 862
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 22 TPEQVEALERVYSECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
>gi|65301426|ref|NP_571355.2| homeobox protein EMX2 [Danio rerio]
gi|62202080|gb|AAH92713.1| Empty spiracles homeobox 2 [Danio rerio]
gi|182891742|gb|AAI65103.1| Emx2 protein [Danio rerio]
Length = 247
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|410900488|ref|XP_003963728.1| PREDICTED: homeobox protein EMX2-like [Takifugu rubripes]
Length = 247
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|15237356|ref|NP_199413.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis thaliana]
gi|9757721|dbj|BAB08246.1| unnamed protein product [Arabidopsis thaliana]
gi|332007943|gb|AED95326.1| homeobox-leucine zipper transcription factor family protein
[Arabidopsis thaliana]
Length = 122
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 25 WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHG-QISETNVYNWFQNRRARLKRK 83
W P Q QILE ++ P I+ +T +L +G ++ + +VY WF NR+ K K
Sbjct: 55 WKPNQHQAQILEELFIGGTVNPSLTSIKQITIKLQSYGEEVDDADVYKWFHNRKYSRKPK 114
>gi|354500717|ref|XP_003512444.1| PREDICTED: ventral anterior homeobox 2-like [Cricetulus griseus]
Length = 231
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 47 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 101
Query: 82 RKQS 85
+ QS
Sbjct: 102 KDQS 105
>gi|449506009|ref|XP_002187478.2| PREDICTED: homeobox protein EMX2, partial [Taeniopygia guttata]
Length = 239
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|402891198|ref|XP_003908840.1| PREDICTED: ventral anterior homeobox 2 [Papio anubis]
Length = 290
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|348566365|ref|XP_003468972.1| PREDICTED: ventral anterior homeobox 2-like [Cavia porcellus]
Length = 291
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|308197324|gb|ADO17770.1| Pax3/7-1 protein [Parhyale hawaiensis]
Length = 486
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTA--ELAKHGQISETNVYNWFQNRRAR 79
R R T T QL+ILE ++ K + D+ ELA+ +++E V WF NRRAR
Sbjct: 193 RSRTTFTAEQLEILERSFE-------KTQYPDVYTREELAQKARLTEARVQVWFSNRRAR 245
Query: 80 LKR 82
L++
Sbjct: 246 LRK 248
>gi|224073502|ref|XP_002195150.1| PREDICTED: paired mesoderm homeobox protein 2 [Taeniopygia guttata]
Length = 209
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 70 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 122
Query: 88 VPNNAES 94
+ N + S
Sbjct: 123 LANRSAS 129
>gi|348507135|ref|XP_003441112.1| PREDICTED: homeobox protein EMX2-like [Oreochromis niloticus]
Length = 247
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 151 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 202
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 203 KFKRQK 208
>gi|296482154|tpg|DAA24269.1| TPA: paired related homeobox 2-like [Bos taurus]
Length = 263
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 124 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 176
Query: 88 VPNNAES 94
+ N + S
Sbjct: 177 LANRSAS 183
>gi|162463494|ref|NP_001105493.1| outer cell layer1 [Zea mays]
gi|5531484|emb|CAB51059.1| OCL1 homeobox protein [Zea mays]
Length = 784
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ EL+K + V WFQNRR R+K
Sbjct: 91 TPQQIQELEALFKECPHPDEKQR-----GELSKRLGLDPRQVKFWFQNRRTRMK 139
>gi|156389454|ref|XP_001635006.1| predicted protein [Nematostella vectensis]
gi|156222095|gb|EDO42943.1| predicted protein [Nematostella vectensis]
Length = 211
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL++LE + +K D + ELA + E V WF+NRRA+
Sbjct: 76 RHRTIFTEEQLELLETTF-------QKTHYPDVLLREELAMKVDLKEERVEVWFKNRRAK 128
Query: 80 LKRKQSGVVPNNAESEAETVTHAES--RKQNPESIQSLEDSAPP 121
++++ V + +E + + A+S ++NPE +S+E + P
Sbjct: 129 WRKQKREAVDSKKANEEDLLQQADSPLTEENPEMCESIEKPSSP 172
>gi|294854649|gb|ADF44266.1| mix homeobox [Ambystoma mexicanum]
Length = 367
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R+R + +PAQLQ LE V+ G P + ELA + E+ + WFQNRRA+ +
Sbjct: 112 RKRTSFSPAQLQALELVFSS-NGYPDIH----LREELAALTLLPESRIQVWFQNRRAKSR 166
Query: 82 RKQS 85
R +S
Sbjct: 167 RYKS 170
>gi|114578030|ref|XP_525781.2| PREDICTED: ventral anterior homeobox 2 [Pan troglodytes]
gi|397521854|ref|XP_003831000.1| PREDICTED: ventral anterior homeobox 2 [Pan paniscus]
gi|426335877|ref|XP_004029432.1| PREDICTED: ventral anterior homeobox 2 [Gorilla gorilla gorilla]
gi|410222776|gb|JAA08607.1| ventral anterior homeobox 2 [Pan troglodytes]
gi|410261428|gb|JAA18680.1| ventral anterior homeobox 2 [Pan troglodytes]
gi|410288440|gb|JAA22820.1| ventral anterior homeobox 2 [Pan troglodytes]
gi|410341141|gb|JAA39517.1| ventral anterior homeobox 2 [Pan troglodytes]
Length = 290
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|435421|gb|AAA03628.1| PAX-3, partial [Homo sapiens]
Length = 332
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T T QL+ LEHV E P + ELA+ +++E V WF NRRAR
Sbjct: 73 RSRTTFTAEQLEELEHVAFERTHYPDIYTRE----ELAQRAKLTEARVQVWFSNRRARW- 127
Query: 82 RKQSGV 87
RKQ+G
Sbjct: 128 RKQAGA 133
>gi|332226793|ref|XP_003262575.1| PREDICTED: ventral anterior homeobox 2 [Nomascus leucogenys]
Length = 290
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|30584433|gb|AAP36469.1| Homo sapiens ventral anterior homeobox 2 [synthetic construct]
gi|60653235|gb|AAX29312.1| ventral anterior homeobox 2 [synthetic construct]
gi|60653237|gb|AAX29313.1| ventral anterior homeobox 2 [synthetic construct]
Length = 291
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|406697718|gb|EKD00973.1| LIM-homeobox protein [Trichosporon asahii var. asahii CBS 8904]
Length = 750
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 18 KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
L + R TP QL++LEH ++ P Q + + +L I++ NV WFQNRR
Sbjct: 140 NLEVKHRRRTTPEQLRVLEHWFN-INPRPDNQVREWLAGQLG----ITKRNVQVWFQNRR 194
Query: 78 ARLKRK 83
A++K +
Sbjct: 195 AKIKNQ 200
>gi|297667380|ref|XP_002811954.1| PREDICTED: ventral anterior homeobox 2 [Pongo abelii]
Length = 290
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|7110735|ref|NP_036608.1| ventral anterior homeobox 2 [Homo sapiens]
gi|20532295|sp|Q9UIW0.1|VAX2_HUMAN RecName: Full=Ventral anterior homeobox 2
gi|5912491|emb|CAB56166.1| VAX2 protein [Homo sapiens]
gi|13623467|gb|AAH06336.1| Ventral anterior homeobox 2 [Homo sapiens]
gi|30582909|gb|AAP35683.1| ventral anterior homeobox 2 [Homo sapiens]
gi|60656287|gb|AAX32707.1| ventral anterior homeobox 2 [synthetic construct]
gi|119620198|gb|EAW99792.1| ventral anterior homeobox 2 [Homo sapiens]
gi|261859188|dbj|BAI46116.1| ventral anterior homeobox 2 [synthetic construct]
gi|326205407|dbj|BAJ84079.1| ventral anterior homeobox 2 [Homo sapiens]
Length = 290
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|402575788|gb|AFQ69084.1| HB8, partial [Pisum sativum]
Length = 550
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQSG 86
TP Q++ LE +Y EC P + Q + E I + WFQNRR R K RK++G
Sbjct: 24 TPEQVEALERLYHECP-KPTSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEAG 82
>gi|242033571|ref|XP_002464180.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
gi|241918034|gb|EER91178.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
Length = 854
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 32 TPEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 87
>gi|149036540|gb|EDL91158.1| ventral anterior homeobox 2 [Rattus norvegicus]
Length = 292
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|440910265|gb|ELR60075.1| Hematopoietically-expressed homeobox protein HHEX, partial [Bos
grunniens mutus]
Length = 246
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQS 114
LAK Q+SE V WFQNRRA+ +R + NN + E E++ ++ ++Q+ S Q+
Sbjct: 147 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPQNNKKEELESLDNSCDQRQDLPSDQN 203
>gi|345649208|gb|AEO14135.1| RHOXF2 protein [Macaca nemestrina]
Length = 285
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
TP QLQ LE ++ +K + + LA+ ++E V WF+NRRA+ +R Q +
Sbjct: 139 TPLQLQELERIFQR-----KKYPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRAL 193
Query: 88 VPNN 91
+ N
Sbjct: 194 MARN 197
>gi|355757667|gb|EHH61192.1| Paired-like homeobox protein PEPP-2 [Macaca fascicularis]
Length = 285
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
TP QLQ LE ++ +K + + LA+ ++E V WF+NRRA+ +R Q +
Sbjct: 139 TPLQLQELERIFQR-----KKYPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRAL 193
Query: 88 VPNN 91
+ N
Sbjct: 194 MARN 197
>gi|355565772|gb|EHH22201.1| hypothetical protein EGK_05425, partial [Macaca mulatta]
Length = 242
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 56 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 110
Query: 82 RKQS 85
+ QS
Sbjct: 111 KDQS 114
>gi|15722331|emb|CAC79215.1| hematopoietically expressed homeobox protein [Sus scrofa]
Length = 221
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRK------QNPES 111
LAK Q+SE V WFQNRRA+ +R + NN + E E++ ++ ++ QN +
Sbjct: 137 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPQNNKKEELESLDNSCDQRQDLPSEQNKGA 196
Query: 112 IQSLEDSAPPPRDEDI 127
+ S + S P ED+
Sbjct: 197 LDSSQCSPSPVSQEDL 212
>gi|147771542|emb|CAN73658.1| hypothetical protein VITISV_036092 [Vitis vinifera]
Length = 284
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T R++ + Q ILE + E KQK+ LAK + V WFQNRRAR
Sbjct: 134 TVRKKLRLSKEQSAILEETFKEHNTLNPKQKLA-----LAKQLNLRPRQVEVWFQNRRAR 188
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQ 107
K KQ+ V + E +T R Q
Sbjct: 189 TKLKQTEVDCEYLKRCCENLTEENRRLQ 216
>gi|308220164|gb|ADO22654.1| homeobox transcription factor HD11a [Mnemiopsis leidyi]
Length = 165
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTA-ELAKHGQISETNVYNWFQNRRARLK--RKQ 84
TP+ LQ+LE + + Q ++ M ELA+ +++ +V WFQNRRARL+ +Q
Sbjct: 90 TPSHLQVLEETFS------KSQYMRGMERDELARRLKVTPKSVTIWFQNRRARLRAESRQ 143
Query: 85 SGVVPNNAESEAETV 99
+ AE+ + V
Sbjct: 144 DKYIKQAAETGSSEV 158
>gi|50835|emb|CAA48753.1| Emx2 [Mus musculus]
Length = 66
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 3 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 54
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 55 KFKRQK 60
>gi|213626795|gb|AAI70131.1| Homeodomain transcription factor Xvex-1 [Xenopus laevis]
Length = 285
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 21 ARQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
AR R +P QL+ LE + E + G+ K++ L+K ++SET + WFQNRR
Sbjct: 132 ARARTKFSPEQLEELERSFKENRYIGSSEKRR-------LSKVLKLSETQIKTWFQNRRM 184
Query: 79 RLKRK 83
+ KR+
Sbjct: 185 KFKRQ 189
>gi|115489546|ref|NP_001067260.1| Os12g0612700 [Oryza sativa Japonica Group]
gi|122248513|sp|Q2QM96.1|HOX33_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
transcription factor HOX33; AltName: Full=OsHox33
gi|187609460|sp|A2ZMN9.2|HOX33_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
transcription factor HOX33; AltName: Full=OsHox33
gi|77556590|gb|ABA99386.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113649767|dbj|BAF30279.1| Os12g0612700 [Oryza sativa Japonica Group]
gi|218187239|gb|EEC69666.1| hypothetical protein OsI_39093 [Oryza sativa Indica Group]
gi|222617467|gb|EEE53599.1| hypothetical protein OsJ_36852 [Oryza sativa Japonica Group]
Length = 855
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 34 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
>gi|6755957|ref|NP_036042.1| ventral anterior homeobox 2 [Mus musculus]
gi|62901394|sp|Q9WTP9.1|VAX2_MOUSE RecName: Full=Ventral anterior homeobox 2; AltName: Full=Ventral
retina homeodomain protein
gi|6649918|gb|AAF21632.1|AF028715_1 ventral retina homeodomain protein [Mus musculus]
gi|4589696|dbj|BAA76867.1| homeobox protein [Mus musculus]
gi|5912493|emb|CAB56169.1| Vax2 protein [Mus musculus]
gi|109732632|gb|AAI16390.1| Ventral anterior homeobox containing gene 2 [Mus musculus]
gi|109732875|gb|AAI16391.1| Ventral anterior homeobox containing gene 2 [Mus musculus]
gi|146141241|gb|AAH90635.1| Ventral anterior homeobox containing gene 2 [Mus musculus]
gi|148666682|gb|EDK99098.1| ventral anterior homeobox containing gene 2 [Mus musculus]
Length = 292
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|2980868|emb|CAA72534.1| Cn-ems protein [Hydractinia symbiolongicarpus]
Length = 251
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 12 VASGSQKLTA-----RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISE 66
+ S KLT+ R R TP QL LE+ ++ + D +LA+ +++E
Sbjct: 160 IKSKHHKLTSSKKRKRHRTAFTPTQLLGLENSFERGHYL-----VGDERRQLAQFLRLTE 214
Query: 67 TNVYNWFQNRRARLKRKQSGVVPN 90
T + WFQNRR + KR+++ + N
Sbjct: 215 TQIKVWFQNRRTKWKRQRNALYEN 238
>gi|431912594|gb|ELK14612.1| Ventral anterior homeobox 2 [Pteropus alecto]
Length = 291
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 101 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 155
Query: 82 RKQS 85
+ QS
Sbjct: 156 KDQS 159
>gi|345649212|gb|AEO14137.1| RHOXF2 protein [Macaca mulatta]
Length = 283
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
TP QLQ LE ++ +K + + LA+ ++E V WF+NRRA+ +R Q +
Sbjct: 137 TPLQLQELERIFQR-----KKYPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRAL 191
Query: 88 VPNN 91
+ N
Sbjct: 192 MARN 195
>gi|345649200|gb|AEO14131.1| RHOXF2 protein [Macaca arctoides]
gi|345649202|gb|AEO14132.1| RHOXF2 protein [Macaca thibetana]
gi|345649204|gb|AEO14133.1| RHOXF2 protein [Macaca assamensis]
Length = 285
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
TP QLQ LE ++ +K + + LA+ ++E V WF+NRRA+ +R Q +
Sbjct: 139 TPLQLQELERIFQR-----KKYPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRAL 193
Query: 88 VPNN 91
+ N
Sbjct: 194 MARN 197
>gi|345649210|gb|AEO14136.1| RHOXF2 protein [Macaca mulatta]
gi|355705117|gb|EHH31042.1| Paired-like homeobox protein PEPP-2 [Macaca mulatta]
gi|387542252|gb|AFJ71753.1| rhox homeobox family member 2 [Macaca mulatta]
Length = 283
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
TP QLQ LE ++ +K + + LA+ ++E V WF+NRRA+ +R Q +
Sbjct: 137 TPLQLQELERIFQR-----KKYPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRAL 191
Query: 88 VPNN 91
+ N
Sbjct: 192 MARN 195
>gi|6093750|sp|Q90963.1|PRRX2_CHICK RecName: Full=Paired mesoderm homeobox protein 2; Short=PRX-2
gi|558377|emb|CAA56136.1| Prx-2 (S8) [Gallus gallus]
Length = 165
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVP 89
+QLQ LE V++ + ELA+ +SE V WFQNRRA+ +R + ++
Sbjct: 26 SQLQALERVFERTHYPD-----AFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 80
Query: 90 NNAES 94
N + S
Sbjct: 81 NRSAS 85
>gi|300796717|ref|NP_001179242.1| ventral anterior homeobox 2 [Bos taurus]
gi|296482707|tpg|DAA24822.1| TPA: ventral anterior homeobox 2-like [Bos taurus]
Length = 286
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 101 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 155
Query: 82 RKQS 85
+ QS
Sbjct: 156 KDQS 159
>gi|345649206|gb|AEO14134.1| RHOXF2 protein [Macaca nemestrina]
Length = 285
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
TP QLQ LE ++ +K + + LA+ ++E V WF+NRRA+ +R Q +
Sbjct: 139 TPLQLQELERIFQR-----KKYPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRAL 193
Query: 88 VPNN 91
+ N
Sbjct: 194 MARN 197
>gi|440909332|gb|ELR59250.1| Ventral anterior homeobox 2, partial [Bos grunniens mutus]
Length = 257
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 72 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 126
Query: 82 RKQS 85
+ QS
Sbjct: 127 KDQS 130
>gi|432115342|gb|ELK36759.1| Homeobox protein EMX2 [Myotis davidii]
Length = 167
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 71 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 122
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 123 KFKRQK 128
>gi|148227002|ref|NP_001081954.1| homeobox protein vex1 [Xenopus laevis]
gi|82224827|sp|Q9W769.1|VEX1_XENLA RecName: Full=Homeobox protein vex1; AltName: Full=Homeodomain
transcription factor vex-1; AltName: Full=Ventral
homeobox protein; AltName: Full=Xvex-1
gi|5326874|gb|AAD42079.1|AF149307_1 homeodomain transcription factor Xvex-1 [Xenopus laevis]
Length = 285
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 21 ARQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
AR R +P QL+ LE + E + G+ K++ L+K ++SET + WFQNRR
Sbjct: 132 ARARTKFSPEQLEELERSFKENRYIGSSEKRR-------LSKVLKLSETQIKTWFQNRRM 184
Query: 79 RLKRK 83
+ KR+
Sbjct: 185 KFKRQ 189
>gi|169730542|gb|ACA64837.1| SKIP interacting protein 22 [Oryza sativa]
Length = 855
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 34 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
>gi|402911275|ref|XP_003918262.1| PREDICTED: rhox homeobox family member 2B-like [Papio anubis]
Length = 285
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
TP QLQ LE ++ +K + + LA+ ++E V WF+NRRA+ +R Q +
Sbjct: 139 TPLQLQELERIFQR-----KKYPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRAL 193
Query: 88 VPNN 91
+ N
Sbjct: 194 MARN 197
>gi|395841294|ref|XP_003793480.1| PREDICTED: ventral anterior homeobox 2 [Otolemur garnettii]
Length = 290
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQS 85
+ QS
Sbjct: 159 KDQS 162
>gi|380024040|ref|XP_003695815.1| PREDICTED: uncharacterized protein LOC100869792 [Apis florea]
Length = 310
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 179 RIRTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQALS--------LTETQVKVWFQNRRT 230
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 231 KHKRMQ 236
>gi|335307553|ref|XP_003360879.1| PREDICTED: hypothetical protein LOC100621279 [Sus scrofa]
Length = 460
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 364 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 415
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 416 KFKRQK 421
>gi|321463180|gb|EFX74198.1| hypothetical protein DAPPUDRAFT_38036 [Daphnia pulex]
Length = 66
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA++ ++ET V WFQNRR
Sbjct: 3 RVRTAFSPSQLLKLEHAFEKNHYVVGAERKQ--------LAQNLNLTETQVKVWFQNRRT 54
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 55 KHKRVQ 60
>gi|254582074|ref|XP_002497022.1| ZYRO0D13596p [Zygosaccharomyces rouxii]
gi|238939914|emb|CAR28089.1| ZYRO0D13596p [Zygosaccharomyces rouxii]
Length = 449
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ ++ C P K+K Q ELA+ +SE V WFQNRR
Sbjct: 168 LARRKRRRTSTQELNILQAEFELCSA-PDKKKRQ----ELAERCNMSEKAVQIWFQNRRQ 222
Query: 79 RLKRKQSGVV 88
+K++++
Sbjct: 223 AIKKQKNAAA 232
>gi|213512404|ref|NP_001135198.1| homeobox protein EMX2 [Salmo salar]
gi|209153741|gb|ACI33177.1| Homeobox protein EMX2 [Salmo salar]
gi|223648536|gb|ACN11026.1| Homeobox protein EMX2 [Salmo salar]
Length = 248
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 150 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHTLSLTETQVKVWFQNRRT 201
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 202 KFKRQK 207
>gi|110349560|gb|ABG73255.1| class III HD-Zip protein HDZ31 [Austrobaileya scandens]
Length = 181
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSG 86
T Q++ LE VY EC P + Q + E + I + WFQNRR R+K+++
Sbjct: 7 TAEQVEALERVYTECP-KPSSMRRQQLVRECSILANIEPKQIKVWFQNRRCRVKQRKEA 64
>gi|345649172|gb|AEO14117.1| RHOXF2 protein [Pan troglodytes]
Length = 281
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSG- 86
TP QLQ LE ++ +C+ P + + LA+ ++E V WF+NRRA+ +R Q
Sbjct: 135 TPLQLQELERIF-QCEQFPS----EFLRGWLARSMNVTELAVQIWFENRRAKWERHQRAS 189
Query: 87 ----VVPNNAESEAETVTHAES 104
++P A + VT AE+
Sbjct: 190 MARNMLPFMAVGQPVMVTAAEA 211
>gi|356528394|ref|XP_003532788.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine
max]
Length = 849
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 13 ASGSQKLTARQRWTP-TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
AS Q+L ++ TP Q++ LE VY EC P + Q + E I +
Sbjct: 10 ASNKQQLMDCGKYVRYTPEQVEALERVYIECP-KPSSSRRQQIIRECPLLANIETKQIKV 68
Query: 72 WFQNRRARLKRKQ 84
WFQNRR R K+++
Sbjct: 69 WFQNRRCREKQRK 81
>gi|114690015|ref|XP_529136.2| PREDICTED: rhox homeobox family member 2 [Pan troglodytes]
Length = 281
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSG- 86
TP QLQ LE ++ +C+ P + + LA+ ++E V WF+NRRA+ +R Q
Sbjct: 135 TPLQLQELERIF-QCEQFPS----EFLRGWLARSMNVTELAVQIWFENRRAKWERHQRAS 189
Query: 87 ----VVPNNAESEAETVTHAES 104
++P A + VT AE+
Sbjct: 190 MARNMLPFMAVGQPVMVTAAEA 211
>gi|359073912|ref|XP_002694024.2| PREDICTED: homeobox protein MIXL1 [Bos taurus]
Length = 237
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
V+S SQ+ R+R + P QLQ+LE V+ R+ D + LA + E+ +
Sbjct: 86 VSSASQR---RKRTSFRPEQLQLLELVF-------RRTMYPDIHLRERLAALTLLPESRI 135
Query: 70 YNWFQNRRARLKRKQSG 86
WFQNRRA+ R+QSG
Sbjct: 136 QVWFQNRRAK-SRRQSG 151
>gi|297734590|emb|CBI16641.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
+G T R++ + Q ILE + E KQK+ LAK + V WF
Sbjct: 111 AGGTGDTVRKKLRLSKEQSAILEETFKEHNTLNPKQKLA-----LAKQLNLRPRQVEVWF 165
Query: 74 QNRRARLKRKQSGVVPNNAESEAETVTHAESRKQ 107
QNRRAR K KQ+ V + E +T R Q
Sbjct: 166 QNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQ 199
>gi|347360919|ref|NP_001231508.1| hematopoietically-expressed homeobox protein HHEX [Sus scrofa]
Length = 269
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN 108
LAK Q+SE V WFQNRRA+ +R + NN + E E++ ++ ++Q+
Sbjct: 170 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPQNNKKEELESLDNSCDQRQD 220
>gi|444524317|gb|ELV13792.1| Homeobox protein EMX2 [Tupaia chinensis]
Length = 253
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 157 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 208
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 209 KFKRQK 214
>gi|345806252|ref|XP_548419.3| PREDICTED: paired mesoderm homeobox protein 2 [Canis lupus
familiaris]
Length = 214
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 75 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 127
Query: 88 VPNNAES 94
+ N + +
Sbjct: 128 LANRSAT 134
>gi|341887986|gb|EGT43921.1| hypothetical protein CAEBREN_29205 [Caenorhabditis brenneri]
Length = 192
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 28 TPAQLQILEHVYDECKG-TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSG 86
T Q LEH +D K +P+++K +LAK +SE V WFQNRRA+ +R
Sbjct: 106 TNEQTDALEHKFDSNKYLSPQERK------KLAKSLSLSERQVKTWFQNRRAKWRR---- 155
Query: 87 VVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
V + E E E A +R S+ LE S P
Sbjct: 156 -VRKDGEDEDEMPNGASAR-----SLGQLEMSNP 183
>gi|195111020|ref|XP_002000077.1| GI22735 [Drosophila mojavensis]
gi|193916671|gb|EDW15538.1| GI22735 [Drosophila mojavensis]
Length = 541
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 17/84 (20%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
GN PF + R R +P QL LEH ++ G RKQ Q ++
Sbjct: 310 GNFLLQPF------RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS----- 358
Query: 61 HGQISETNVYNWFQNRRARLKRKQ 84
++ET V WFQNRR + KR Q
Sbjct: 359 ---LTETQVKVWFQNRRTKHKRMQ 379
>gi|259013305|ref|NP_001158361.1| empty spiracles homeobox [Saccoglossus kowalevskii]
gi|32307775|gb|AAP79284.1| emx [Saccoglossus kowalevskii]
Length = 222
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAK 60
G+P + + R R +P+QL LEH +++ G RKQ LA
Sbjct: 69 GDPMHGGLMLQNPFRKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAS 120
Query: 61 HGQISETNVYNWFQNRRARLKR 82
++ET V WFQNRR + KR
Sbjct: 121 SLNLTETQVKVWFQNRRTKYKR 142
>gi|18252583|gb|AAL66343.1|AF461039_1 paired-type homeobox Atx [Mus musculus]
Length = 282
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 73 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 125
Query: 80 LKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H E + + P S LE PP
Sbjct: 126 FRKKQRSLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPP 168
>gi|440896846|gb|ELR48664.1| Homeobox protein MIXL1 [Bos grunniens mutus]
Length = 237
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
V+S SQ+ R+R + P QLQ+LE V+ R+ D + LA + E+ +
Sbjct: 86 VSSASQR---RKRTSFRPEQLQLLELVF-------RRTMYPDIHLRERLAALTLLPESRI 135
Query: 70 YNWFQNRRARLKRKQSG 86
WFQNRRA+ R+QSG
Sbjct: 136 QVWFQNRRAK-SRRQSG 151
>gi|115454289|ref|NP_001050745.1| Os03g0640800 [Oryza sativa Japonica Group]
gi|75119691|sp|Q6AST1.1|HOX32_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
transcription factor HOX32; AltName: Full=OsHox32
gi|50881435|gb|AAT85280.1| homeobox leucine-zipper protein, putative [Oryza sativa Japonica
Group]
gi|108710033|gb|ABF97828.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113549216|dbj|BAF12659.1| Os03g0640800 [Oryza sativa Japonica Group]
gi|215737063|dbj|BAG95992.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 859
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 37 TPEQVEALERVYGECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 92
>gi|410955159|ref|XP_003984225.1| PREDICTED: ventral anterior homeobox 2 [Felis catus]
Length = 305
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 116 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 170
Query: 82 RKQS 85
+ QS
Sbjct: 171 KDQS 174
>gi|302755606|ref|XP_002961227.1| hypothetical protein SELMODRAFT_270225 [Selaginella
moellendorffii]
gi|300172166|gb|EFJ38766.1| hypothetical protein SELMODRAFT_270225 [Selaginella
moellendorffii]
Length = 855
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY+EC P + Q + E I + WFQNRR R K+++
Sbjct: 23 TPEQVEALERVYNECP-KPSSIRRQQLLREYPVLANIEPRQIKVWFQNRRCREKQRK 78
>gi|242086246|ref|XP_002443548.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
gi|241944241|gb|EES17386.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
Length = 857
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
A G+ ++ A + TP Q++ LE VY EC P + Q + + I + W
Sbjct: 18 AQGAPQVDAGKYVRYTPEQVEALERVYSECP-KPSSLRRQQLIRDCPILSNIEPKQIKVW 76
Query: 73 FQNRRARLK-RKQS 85
FQNRR R K RK+S
Sbjct: 77 FQNRRCREKQRKES 90
>gi|410078209|ref|XP_003956686.1| hypothetical protein KAFR_0C05600 [Kazachstania africana CBS 2517]
gi|372463270|emb|CCF57551.1| hypothetical protein KAFR_0C05600 [Kazachstania africana CBS 2517]
Length = 384
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ +D+C +K+++ ELA ++E V WFQN+R
Sbjct: 153 LARRKRRRTSTQELNILQASFDKCPTPDKKERL-----ELADRCNMTEKAVQIWFQNKRQ 207
Query: 79 RLKRKQ 84
+KR +
Sbjct: 208 AVKRAK 213
>gi|187609448|sp|A2XK30.1|HOX32_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
transcription factor HOX32; AltName: Full=OsHox32
gi|125545051|gb|EAY91190.1| hypothetical protein OsI_12798 [Oryza sativa Indica Group]
Length = 859
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 37 TPEQVEALERVYGECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 92
>gi|18042103|gb|AAL57830.1|AF452568_1 homeodomain transcription factor Zen2 [Tribolium castaneum]
Length = 243
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 19/126 (15%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T +QL LE + K R ++IQ +A++ ++E + WFQNRR + K
Sbjct: 87 RARTAYTSSQLVELEREFHRSKYLCRPRRIQ-----MAQNLNLTERQIKIWFQNRRMKFK 141
Query: 82 RKQSG--VVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLGIDQM 139
+++ V P + +EA +P+S S +SA P + +Y Q P G Q+
Sbjct: 142 KEEKNKVVTPKTSPNEASM---------SPQSTSS-NNSASPKACQFLYNQFP--GSSQV 189
Query: 140 IGKMEI 145
+ K E
Sbjct: 190 VVKDET 195
>gi|58372170|ref|NP_001007473.1| homeobox protein notochord [Mus musculus]
gi|81889615|sp|Q5TIS6.1|NOTO_MOUSE RecName: Full=Homeobox protein notochord
gi|55771003|emb|CAI05851.1| Not homeodomain protein [Mus musculus]
gi|55771005|emb|CAI05852.1| Not homeodomain protein [Mus musculus]
gi|55771007|emb|CAI05853.1| Not homeodomain protein [Mus musculus]
gi|74189379|dbj|BAE22716.1| unnamed protein product [Mus musculus]
gi|187954221|gb|AAI39155.1| Notochord homolog (Xenopus laevis) [Mus musculus]
gi|187954223|gb|AAI39156.1| Notochord homolog (Xenopus laevis) [Mus musculus]
Length = 240
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G+++ T R R T QLQ LE V+ + K++ A+LA ++E V WFQ
Sbjct: 144 GTERHTKRVRTTFNLQQLQELEKVFAKQHNLVGKER-----AQLAARLHLTENQVRIWFQ 198
Query: 75 NRRARLKRKQSGVVPNNAESE 95
NRR + +++Q +P+++ E
Sbjct: 199 NRRVKYQKQQKLKLPSSSVME 219
>gi|356512574|ref|XP_003524993.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine
max]
Length = 853
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 28 TPEQVEALERVYVECP-KPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCREKQRK 83
>gi|350539483|ref|NP_001234657.1| cutin deficient 2 [Solanum lycopersicum]
gi|255529749|gb|ACU12849.1| cutin deficient 2 [Solanum lycopersicum]
Length = 821
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 133 TPQQIQELESLFKECPHPDEKQRL-----ELSKRLSLETRQVKFWFQNRRTQMK 181
>gi|15226808|ref|NP_181018.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
gi|75096986|sp|O04291.1|ATB14_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-14; AltName:
Full=HD-ZIP protein ATHB-14; AltName: Full=Homeodomain
transcription factor ATHB-14; AltName: Full=Protein
PHABULOSA
gi|2145356|emb|CAA72007.1| HD-Zip protein [Arabidopsis thaliana]
gi|3132474|gb|AAC16263.1| homeodomain transcription factor (ATHB-14) [Arabidopsis thaliana]
gi|20152534|emb|CAD29659.1| homeodomain-leucine zipper protein 14 [Arabidopsis thaliana]
gi|20466650|gb|AAM20642.1| homeodomain transcription factor [Arabidopsis thaliana]
gi|23198254|gb|AAN15654.1| homeodomain transcription factor [Arabidopsis thaliana]
gi|330253918|gb|AEC09012.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
Length = 852
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 30 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 85
>gi|195571043|ref|XP_002103513.1| GD18937 [Drosophila simulans]
gi|194199440|gb|EDX13016.1| GD18937 [Drosophila simulans]
Length = 496
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK Q++ +SET V WFQNRR
Sbjct: 392 RIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLN--------LSETQVKVWFQNRRT 443
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 444 KHKRMQ 449
>gi|167233978|ref|NP_001038090.1| zerknullt-related [Tribolium castaneum]
gi|13241684|gb|AAK16425.1|AF321227_5 Zen2 [Tribolium castaneum]
gi|270002808|gb|EEZ99255.1| zerknullt-2 [Tribolium castaneum]
Length = 292
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 19/125 (15%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T +QL LE + K R ++IQ +A++ ++E + WFQNRR + K
Sbjct: 107 RARTAYTSSQLVELEREFHRSKYLCRPRRIQ-----MAQNLNLTERQIKIWFQNRRMKFK 161
Query: 82 RKQSG--VVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLGIDQM 139
+++ V P + +EA +P+S S +SA P + +Y Q P G Q+
Sbjct: 162 KEEKNKVVTPKTSPNEASM---------SPQSTSS-NNSASPKACQFLYNQFP--GSSQV 209
Query: 140 IGKME 144
+ K E
Sbjct: 210 VVKDE 214
>gi|302770879|ref|XP_002968858.1| hypothetical protein SELMODRAFT_6792 [Selaginella moellendorffii]
gi|302784682|ref|XP_002974113.1| hypothetical protein SELMODRAFT_6791 [Selaginella moellendorffii]
gi|300158445|gb|EFJ25068.1| hypothetical protein SELMODRAFT_6791 [Selaginella moellendorffii]
gi|300163363|gb|EFJ29974.1| hypothetical protein SELMODRAFT_6792 [Selaginella moellendorffii]
Length = 140
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLED 117
LAKH + V WFQNRRAR K KQ+ + + ET+T R Q + +Q L
Sbjct: 45 LAKHLNLRPRQVEVWFQNRRARTKLKQTEIDCELLKRCCETLTEENRRLQ--KELQELRA 102
Query: 118 -SAPPP 122
PPP
Sbjct: 103 IKVPPP 108
>gi|194901328|ref|XP_001980204.1| GG19873 [Drosophila erecta]
gi|190651907|gb|EDV49162.1| GG19873 [Drosophila erecta]
Length = 503
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK Q++ +SET V WFQNRR
Sbjct: 399 RIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLN--------LSETQVKVWFQNRRT 450
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 451 KHKRMQ 456
>gi|302772080|ref|XP_002969458.1| hypothetical protein SELMODRAFT_146209 [Selaginella
moellendorffii]
gi|110349516|gb|ABG73233.1| class III HD-Zip protein HDZ31 [Selaginella moellendorffii]
gi|300162934|gb|EFJ29546.1| hypothetical protein SELMODRAFT_146209 [Selaginella
moellendorffii]
Length = 855
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY+EC P + Q + E I + WFQNRR R K+++
Sbjct: 23 TPEQVEALERVYNECP-KPSSIRRQQLLREYPVLANIEPRQIKVWFQNRRCREKQRK 78
>gi|395531478|ref|XP_003767805.1| PREDICTED: homeobox protein MIXL1 [Sarcophilus harrisii]
Length = 265
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAE--LAKHGQISETNVYNWFQNRRAR 79
R+R + +P QLQ+LE V+ R+ D+T LA ++ E+ + WFQNRRA+
Sbjct: 121 RKRTSFSPEQLQLLELVF-------RRTMYPDITLRERLATLTRLPESRIQVWFQNRRAK 173
Query: 80 LKRKQ 84
+R++
Sbjct: 174 SRRQR 178
>gi|219560134|gb|ACL27275.1| homeodomain leucine-zipper 1 [Capsicum annuum]
Length = 272
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
AR++ T AQ +LE + KQK QD+ EL+ + V WFQNRRAR
Sbjct: 126 ARKKLRLTKAQSALLEESFKLHSTLNPKQK-QDLAMELS----LRPRQVEVWFQNRRART 180
Query: 81 KRKQSGVVPNNAESEAETVTHAESR 105
K KQ+ V + ET+T R
Sbjct: 181 KLKQTEVDCEFLKKCCETLTEENRR 205
>gi|383212095|dbj|BAM08934.1| class III homeobox-leucine zipper protein [Asparagus officinalis]
Length = 849
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 17 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
Q++ A + TP Q++ LE VY EC P + Q + E I + WFQNR
Sbjct: 17 QQIDAGKYVRYTPEQVEALERVYSECP-KPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 75
Query: 77 RARLKRKQ 84
R R K+++
Sbjct: 76 RCREKQRK 83
>gi|348535107|ref|XP_003455043.1| PREDICTED: ventral anterior homeobox 1-like [Oreochromis niloticus]
Length = 314
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 93 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 147
Query: 82 RKQ 84
+ Q
Sbjct: 148 KDQ 150
>gi|292621532|ref|XP_002664678.1| PREDICTED: hypothetical protein LOC100330956 [Danio rerio]
Length = 327
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 22 RQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
R+R T Q+ +LE VY + K ++K++ +T + E+ + WFQNRRA+
Sbjct: 60 RKRTNFTQQQIDVLEKVYLDTKYPDIYLREKLEALTG-------LPESRIQVWFQNRRAK 112
Query: 80 LKRKQSGVVPNNAESEAET----VTHAESRKQNPESIQSLEDSA 119
+R+ +PN T + H + QN +++L+ ++
Sbjct: 113 SRRQVGISIPNKTSGNILTPNNLLMHQFTTHQNHSGLENLQRTS 156
>gi|157818253|ref|NP_001101431.1| diencephalon/mesencephalon homeobox 1 [Rattus norvegicus]
gi|149035616|gb|EDL90297.1| diencephalon/mesencephalon homeobox 1 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149035617|gb|EDL90298.1| diencephalon/mesencephalon homeobox 1 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 376
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 68 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 120
Query: 80 LKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H E + + P S LE PP
Sbjct: 121 FRKKQRSLQKEQLQKQKEAEGSHGEGKMETPASNTQLEAEQPP 163
>gi|302805045|ref|XP_002984274.1| hypothetical protein SELMODRAFT_180804 [Selaginella
moellendorffii]
gi|300148123|gb|EFJ14784.1| hypothetical protein SELMODRAFT_180804 [Selaginella
moellendorffii]
Length = 836
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + + G I + WFQNRR R K+++
Sbjct: 18 TPEQVEALERVYHECP-KPSSIRRQQIVRDYPVLGNIEPRQIKVWFQNRRCREKQRK 73
>gi|160421815|gb|ABX39492.1| AmphiHox8 [Branchiostoma floridae]
Length = 212
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 6 PYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQIS 65
P++ +G ++ RQ T + Q LE + K R+++I E+A ++
Sbjct: 115 PFYPWMRTAGPERRRGRQ--TYSRYQTLELEKEFHFNKYLTRRRRI-----EIAHALGLT 167
Query: 66 ETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRK 106
E + WFQNRR +LK++ + + P AE+E E + +S K
Sbjct: 168 ERQIKIWFQNRRMKLKKEAAMLCPPKAETETEKSSDGQSEK 208
>gi|357466691|ref|XP_003603630.1| Class III HD-Zip protein [Medicago truncatula]
gi|355492678|gb|AES73881.1| Class III HD-Zip protein [Medicago truncatula]
Length = 834
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQSG 86
TP Q++ LE +Y EC P + Q + E I + WFQNRR R K RK++G
Sbjct: 24 TPEQVEALERLYHECP-KPTSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEAG 82
>gi|291386603|ref|XP_002709688.1| PREDICTED: ventral anterior homeobox 2-like [Oryctolagus cuniculus]
Length = 228
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 42 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 96
Query: 82 RKQS 85
+ QS
Sbjct: 97 KDQS 100
>gi|195500938|ref|XP_002097588.1| GE26304 [Drosophila yakuba]
gi|194183689|gb|EDW97300.1| GE26304 [Drosophila yakuba]
Length = 499
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK Q++ +SET V WFQNRR
Sbjct: 395 RIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLN--------LSETQVKVWFQNRRT 446
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 447 KHKRMQ 452
>gi|391338734|ref|XP_003743710.1| PREDICTED: uncharacterized protein LOC100900686 [Metaseiulus
occidentalis]
Length = 854
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T T QL +LE V+ + K++ Q LA+ +SE + WFQNRR + K
Sbjct: 722 RLRTTFTKEQLDMLESVFKIKQYVVGKERTQ-----LAQQLNLSENQIKVWFQNRRTKHK 776
Query: 82 RKQSG 86
+++ G
Sbjct: 777 KEEEG 781
>gi|302781336|ref|XP_002972442.1| hypothetical protein SELMODRAFT_270954 [Selaginella
moellendorffii]
gi|110349518|gb|ABG73234.1| class III HD-Zip protein HDZ32 [Selaginella moellendorffii]
gi|300159909|gb|EFJ26528.1| hypothetical protein SELMODRAFT_270954 [Selaginella
moellendorffii]
Length = 840
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + + G I + WFQNRR R K+++
Sbjct: 18 TPEQVEALERVYHECP-KPSSIRRQQIVRDYPVLGNIEPRQIKVWFQNRRCREKQRK 73
>gi|356524168|ref|XP_003530704.1| PREDICTED: uncharacterized protein LOC100811885 [Glycine max]
Length = 400
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
++R TPAQL+ LE Y++ K ++M +ELA +++E + WF +RR + K
Sbjct: 20 KKRRLKTPAQLKALEDFYND-----NKYPTEEMKSELADELELTEKQISGWFCHRRLKDK 74
Query: 82 R-------------KQSGVVPNNA----ESEAETVTHAESRKQNPESIQS 114
+ + SGV+ + + + H R +P+ ++S
Sbjct: 75 KMLNDEVCANGRQDRSSGVIQDRGSGLVQDSCGSTKHVHYRYLDPKEVES 124
>gi|68226720|ref|NP_919391.2| ventral anterior homeobox 1 [Danio rerio]
gi|68085509|gb|AAH65951.2| Ventral anterior homeobox 1 [Danio rerio]
Length = 317
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 94 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 148
Query: 82 RKQ 84
+ Q
Sbjct: 149 KDQ 151
>gi|195392409|ref|XP_002054850.1| GJ24670 [Drosophila virilis]
gi|194152936|gb|EDW68370.1| GJ24670 [Drosophila virilis]
Length = 537
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P QL LEH ++ G RKQ Q ++ ++ET V WFQNRR
Sbjct: 312 RVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLS--------LTETQVKVWFQNRRT 363
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 364 KHKRMQ 369
>gi|11231065|dbj|BAB18171.1| homeobox-leucine zipper protein [Zinnia elegans]
Length = 247
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 29/134 (21%)
Query: 19 LTARQRWTPTPAQLQILEHVYD-ECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
L + ++ T Q++ LE ++ E K P ++ +LAK + V WFQNRR
Sbjct: 49 LISEKKRRLTAVQVKALEKNFEMENKLEPERK------VKLAKELALQPRQVAIWFQNRR 102
Query: 78 ARLKRKQ----SGVVPNNAESEAETVTHA-ESRKQNPES----IQSLE---------DSA 119
AR K KQ GV+ +N +S + H ES KQ+ ES I+ L+ D+
Sbjct: 103 ARWKTKQLERDYGVLKSNFDS----LKHKYESLKQDNESMVKQIKELKSKLYEEDEPDNI 158
Query: 120 PPPRDEDIYPQSPD 133
P P D P+SP+
Sbjct: 159 PMPEQSDDKPKSPE 172
>gi|357476775|ref|XP_003608673.1| Homeobox-leucine zipper protein [Medicago truncatula]
gi|355509728|gb|AES90870.1| Homeobox-leucine zipper protein [Medicago truncatula]
Length = 278
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
TAR++ + Q ILE + E KQK+ LAK + V WFQNRRAR
Sbjct: 115 TARKKLRLSKDQSAILEETFKEHNTLNPKQKLA-----LAKQLGLRPRQVEVWFQNRRAR 169
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQ 107
K KQ+ V + E +T R Q
Sbjct: 170 TKLKQTEVDCEVLKRCCENLTEENRRLQ 197
>gi|297826941|ref|XP_002881353.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
lyrata]
gi|297327192|gb|EFH57612.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
lyrata]
Length = 859
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 37 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 92
>gi|334313181|ref|XP_001366111.2| PREDICTED: ventral anterior homeobox 2-like [Monodelphis domestica]
Length = 479
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 273 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 327
Query: 82 RKQS 85
+ QS
Sbjct: 328 KDQS 331
>gi|86355077|dbj|BAE78773.1| homeobox protein Emx2 [Pelodiscus sinensis]
Length = 180
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 84 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 135
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 136 KFKRQK 141
>gi|357146669|ref|XP_003574071.1| PREDICTED: homeobox-leucine zipper protein HOX9-like
[Brachypodium distachyon]
Length = 841
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQS 85
TP Q++ LE VY EC P + Q + E I + WFQNRR R K RK+S
Sbjct: 36 TPEQVEALERVYAECP-KPTSTRRQQLLRECPILSNIEARQIKVWFQNRRCRDKQRKES 93
>gi|356501401|ref|XP_003519513.1| PREDICTED: uncharacterized protein LOC100805913 [Glycine max]
Length = 526
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
++R TPAQL+ LE Y+E K ++M LA+ ++E + WF +RR + K
Sbjct: 20 KKRKLKTPAQLKALEDFYNE-----HKYPTEEMKLVLAEELGLTEKQISGWFCHRRLKDK 74
Query: 82 R-------------KQSGVVPNN----AESEAETVTHAESRKQNPESIQS 114
R + SGV+ + + + HA+ R +P+ ++S
Sbjct: 75 RLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVES 124
>gi|149040516|gb|EDL94554.1| ventral anterior homeobox 1 [Rattus norvegicus]
Length = 336
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|187471150|sp|A2Z1U1.1|HOX11_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX11; AltName:
Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain
transcription factor HOX11; AltName: Full=OsHox11
gi|125563922|gb|EAZ09302.1| hypothetical protein OsI_31575 [Oryza sativa Indica Group]
Length = 276
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+AR++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 87 SARKKLRLSKEQSAFLEESFKEHSTLNPKQKLA-----LAKQLNLRPRQVEVWFQNRRAR 141
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQ 107
K KQ+ V + ET+T R Q
Sbjct: 142 TKLKQTEVDCEYLKRCCETLTEENRRLQ 169
>gi|399911|sp|P18488.2|EMS_DROME RecName: Full=Homeotic protein empty spiracles
gi|8820|emb|CAA46985.1| ems W13 [Drosophila melanogaster]
Length = 497
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK Q++ +SET V WFQNRR
Sbjct: 393 RIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLN--------LSETQVKVWFQNRRT 444
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 445 KHKRMQ 450
>gi|356569985|ref|XP_003553173.1| PREDICTED: uncharacterized protein LOC100812697 [Glycine max]
Length = 381
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
++R TPAQL+ LE Y++ K ++M +ELA +++E + WF +RR + K
Sbjct: 20 KKRRLKTPAQLKGLEDFYND-----NKYPTEEMKSELADELELTEKQISGWFCHRRLKDK 74
Query: 82 R-------------KQSGVVPNNA----ESEAETVTHAESRKQNPESIQS 114
+ + SGV+ + + + H + R +P+ ++S
Sbjct: 75 KMLNDEVCANGRHDRSSGVIQDRGSGLVQDSCGSTKHVDYRYLDPKEVES 124
>gi|118487078|gb|ABK95369.1| unknown [Populus trichocarpa]
Length = 374
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+AR++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 191 SARKKLRLSKDQSAFLEESFKEHNTLTPKQKLA-----LAKELNLRPRQVEVWFQNRRAR 245
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPE--SIQSLEDSAP 120
K KQ+ V + ET+T E+R+ + E +++L+ S P
Sbjct: 246 TKLKQTEVDCEYLKRCCETLTE-ENRRLHKELQELRALKTSNP 287
>gi|449505949|ref|XP_004175678.1| PREDICTED: LOW QUALITY PROTEIN: ventral anterior homeobox 1
[Taeniopygia guttata]
Length = 320
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 101 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 155
Query: 82 RKQ 84
+ Q
Sbjct: 156 KDQ 158
>gi|345649174|gb|AEO14118.1| RHOXF2 protein [Pan troglodytes]
Length = 274
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSG- 86
TP QLQ LE ++ +C+ P + + LA+ ++E V WF+NRRA+ +R Q
Sbjct: 128 TPLQLQELERIF-QCEQFPS----EFLRGWLARSMNVTELAVQIWFENRRAKWERHQRAS 182
Query: 87 ----VVPNNAESEAETVTHAES 104
++P A + VT AE+
Sbjct: 183 MARNMLPFMAVGQPVMVTAAEA 204
>gi|357136990|ref|XP_003570085.1| PREDICTED: homeobox-leucine zipper protein ROC5-like [Brachypodium
distachyon]
Length = 791
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ AEL++ + V WFQNRR ++K
Sbjct: 95 TPQQIQELEALFKECPHPDEKQR-----AELSRRLSLDARQVKFWFQNRRTQMK 143
>gi|332861547|ref|XP_003317705.1| PREDICTED: rhox homeobox family member 2-like [Pan troglodytes]
Length = 274
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSG- 86
TP QLQ LE ++ +C+ P + + LA+ ++E V WF+NRRA+ +R Q
Sbjct: 128 TPLQLQELERIF-QCEQFPS----EFLRGWLARSMNVTELAVQIWFENRRAKWERHQRAS 182
Query: 87 ----VVPNNAESEAETVTHAES 104
++P A + VT AE+
Sbjct: 183 MARNMLPFMAVGQPVMVTAAEA 204
>gi|194220634|ref|XP_001492575.2| PREDICTED: ventral anterior homeobox 2-like [Equus caballus]
Length = 310
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 124 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 178
Query: 82 RKQS 85
+ QS
Sbjct: 179 KDQS 182
>gi|15232311|ref|NP_191598.1| homeobox-leucine zipper protein HAT3 [Arabidopsis thaliana]
gi|12644275|sp|P46602.2|HAT3_ARATH RecName: Full=Homeobox-leucine zipper protein HAT3; AltName:
Full=Homeodomain-leucine zipper protein HAT3;
Short=HD-ZIP protein 3
gi|7287987|emb|CAB81825.1| homeobox-leucine zipper protein HAT3 [Arabidopsis thaliana]
gi|20067965|emb|CAD29465.1| homeodomain-leucine zipper protein HAT3 [Arabidopsis thaliana]
gi|20466199|gb|AAM20417.1| homeobox-leucine zipper protein HAT3 [Arabidopsis thaliana]
gi|30984526|gb|AAP42726.1| At3g60390 [Arabidopsis thaliana]
gi|332646533|gb|AEE80054.1| homeobox-leucine zipper protein HAT3 [Arabidopsis thaliana]
Length = 315
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 72
SG+ ++R++ + Q +LE + E KQK+ LAK + V W
Sbjct: 152 GSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMA-----LAKQLNLRTRQVEVW 206
Query: 73 FQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQ 107
FQNRRAR K KQ+ V + E +T R Q
Sbjct: 207 FQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQ 241
>gi|410926187|ref|XP_003976560.1| PREDICTED: LOW QUALITY PROTEIN: ventral anterior homeobox 1-like
[Takifugu rubripes]
Length = 289
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 89 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLSLSETQVKVWFQNRRTKQK 143
Query: 82 RKQ 84
+ Q
Sbjct: 144 KDQ 146
>gi|195012802|ref|XP_001983750.1| GH16065 [Drosophila grimshawi]
gi|193897232|gb|EDV96098.1| GH16065 [Drosophila grimshawi]
Length = 605
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Query: 22 RQRWTPTPAQLQILEHVYDE----CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
R R T +P QL LE +D+ C GT K LA +SE V WF NRR
Sbjct: 394 RNRTTFSPEQLDELEKEFDKSHYPCVGTREK---------LASRTMLSEARVQVWFSNRR 444
Query: 78 ARLKRKQ 84
A+ +R Q
Sbjct: 445 AKWRRHQ 451
>gi|25990914|gb|AAN76724.1| Mbx [Mus musculus]
Length = 381
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 73 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 125
Query: 80 LKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H E + + P S LE PP
Sbjct: 126 FRKKQRSLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPP 168
>gi|402910991|ref|XP_003918127.1| PREDICTED: homeobox protein ESX1 [Papio anubis]
Length = 359
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAE--LAKHGQISETNVYNWFQNRRAR 79
R+R T QLQ LE+ +DE + D+ A LA ++E V WFQNRRA+
Sbjct: 139 RRRTAFTQFQLQELENFFDEAQ-------YPDVVARERLAARLNLTEDRVQVWFQNRRAK 191
Query: 80 LKRKQSGVVPNNAESEA 96
KR Q ++ N + A
Sbjct: 192 WKRNQRVLMLRNIAAAA 208
>gi|354476023|ref|XP_003500224.1| PREDICTED: hypothetical protein LOC100750961 [Cricetulus griseus]
Length = 322
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA + ET V WFQNRR
Sbjct: 226 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLQETEVKVWFQNRRT 277
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 278 KFKRQK 283
>gi|125571186|gb|EAZ12701.1| hypothetical protein OsJ_02619 [Oryza sativa Japonica Group]
Length = 840
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K
Sbjct: 130 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMK 178
>gi|344258469|gb|EGW14573.1| Paired mesoderm homeobox protein 2 [Cricetulus griseus]
Length = 185
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 46 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 98
Query: 88 VPNNAESEAETVTHAESRKQ---------NPESI----QSLEDSAPPPRDEDIYPQSPDL 134
+ + S ++ + +Q +PE + S S PP P +P +
Sbjct: 99 LATRSASLLKSYGQEAAIEQPVAPRPTALSPEYLSWPASSPYSSVPPYSPGGSSPTTPGV 158
Query: 135 GIDQMIGKMEIPGS-FSFH 152
+ I + + FS H
Sbjct: 159 NMANSIASLRLKAKEFSLH 177
>gi|332226021|ref|XP_003262187.1| PREDICTED: homeobox protein ESX1 [Nomascus leucogenys]
Length = 412
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAE--LAKHGQISETNVYNWFQNRRAR 79
R+R T QLQ LE+ +DE + D+ A LA ++E V WFQNRRA+
Sbjct: 153 RRRTAFTQFQLQELENFFDEAQ-------YPDLVARERLAARLNLTEDRVQVWFQNRRAK 205
Query: 80 LKRKQSGVVPNNAESEAETVTHAE 103
KR Q ++ N + A + H E
Sbjct: 206 WKRNQRVLMLRNIAAAA--LAHPE 227
>gi|296086017|emb|CBI31458.3| unnamed protein product [Vitis vinifera]
Length = 840
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
T Q++ LE VY EC P + Q + E I + WFQNRR R K+K+ V
Sbjct: 32 TAEQVEALERVYAECP-KPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQKKEAV 90
>gi|82241752|sp|Q801E0.1|VAX1_DANRE RecName: Full=Ventral anterior homeobox 1
gi|28849859|gb|AAO32143.1| homeodomain protein Vax1 [Danio rerio]
Length = 317
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 94 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 148
Query: 82 RKQ 84
+ Q
Sbjct: 149 KDQ 151
>gi|224056521|ref|XP_002298892.1| predicted protein [Populus trichocarpa]
gi|60327627|gb|AAX19053.1| class III HD-Zip protein 4 [Populus trichocarpa]
gi|222846150|gb|EEE83697.1| predicted protein [Populus trichocarpa]
Length = 844
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 21 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 76
>gi|357159529|ref|XP_003578475.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 1
[Brachypodium distachyon]
Length = 864
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K
Sbjct: 134 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMK 182
>gi|357159532|ref|XP_003578476.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 2
[Brachypodium distachyon]
Length = 777
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K
Sbjct: 47 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMK 95
>gi|355562813|gb|EHH19407.1| hypothetical protein EGK_20105, partial [Macaca mulatta]
Length = 170
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 74 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 125
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 126 KFKRQK 131
>gi|348541115|ref|XP_003458032.1| PREDICTED: homeobox protein vent1-like [Oreochromis niloticus]
Length = 196
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 22 RQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
R R T Q+ LEH + + K G +++KI A+ +SET V WFQNRR +
Sbjct: 77 RLRTKFTSEQVSKLEHTFSKQKYLGATQRRKI-------AEELNLSETQVKTWFQNRRMK 129
Query: 80 LKRK 83
LKR+
Sbjct: 130 LKRE 133
>gi|242011842|ref|XP_002426653.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510817|gb|EEB13915.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 398
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
V S SQ R R T +QL LE + + R ++I ELA ++E +
Sbjct: 184 VTSASQGHQKRARTAYTSSQLVELEKEFHYNRYLCRPRRI-----ELANQLNLTERQIKI 238
Query: 72 WFQNRRARLKRKQSGVVPNNAESEAETVTHAE--SRKQNPESIQSLED 117
WFQNRR + K++Q P + + +VT++E S K +P + ED
Sbjct: 239 WFQNRRMKYKKEQK---PGDKPASPSSVTNSEKQSPKMSPNVVDYQED 283
>gi|358416009|ref|XP_871589.4| PREDICTED: homeobox protein MIXL1 [Bos taurus]
Length = 236
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
V+S SQ+ R+R + P QLQ+LE V+ R+ D + LA + E+ +
Sbjct: 85 VSSASQR---RKRTSFRPEQLQLLELVF-------RRTMYPDIHLRERLAALTLLPESRI 134
Query: 70 YNWFQNRRARLKRKQSG 86
WFQNRRA+ R+QSG
Sbjct: 135 QVWFQNRRAK-SRRQSG 150
>gi|21623544|dbj|BAC00919.1| PaxB [Mus musculus]
Length = 387
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 79 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 131
Query: 80 LKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H E + + P S LE PP
Sbjct: 132 FRKKQRSLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPP 174
>gi|24646714|ref|NP_731868.1| empty spiracles [Drosophila melanogaster]
gi|7299821|gb|AAF54999.1| empty spiracles [Drosophila melanogaster]
gi|60677903|gb|AAX33458.1| RE15812p [Drosophila melanogaster]
gi|220943454|gb|ACL84270.1| ems-PA [synthetic construct]
gi|220953482|gb|ACL89284.1| ems-PA [synthetic construct]
Length = 494
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK Q++ +SET V WFQNRR
Sbjct: 390 RIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLN--------LSETQVKVWFQNRRT 441
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 442 KHKRMQ 447
>gi|307715376|gb|ADN88095.1| homeodomain-leucine zipper protein HD4 [Gossypium hirsutum]
Length = 281
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
+ AR++ T Q +LE + + KQK LAK ++ V WFQNRRA
Sbjct: 133 VNARKKLRLTKEQSALLEESFKQHSTLNPKQK-----QALAKQLNLTPRQVEVWFQNRRA 187
Query: 79 RLKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAPP 121
R K KQ+ V + ET+T R Q + +++L+ +A P
Sbjct: 188 RTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLAAQP 231
>gi|225441481|ref|XP_002275747.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Vitis
vinifera]
Length = 331
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ R++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 172 STRKKLRLSKEQSAFLEESFKEHNTLNPKQKL-----ALAKQLNLRPRQVEVWFQNRRAR 226
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAP 120
K KQ+ V + ET+T R Q + +++L+ S P
Sbjct: 227 TKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQP 268
>gi|12018334|ref|NP_072158.1| ventral anterior homeobox 1 [Rattus norvegicus]
gi|81868794|sp|Q9JM00.1|VAX1_RAT RecName: Full=Ventral anterior homeobox 1
gi|6707840|gb|AAF25690.1| ventral anterior homeobox 1 [Rattus norvegicus]
Length = 336
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|75115970|sp|Q67UE2.1|HOX11_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX11; AltName:
Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain
transcription factor HOX11; AltName: Full=OsHox11
gi|51536105|dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa
Japonica Group]
Length = 362
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+AR++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 174 SARKKLRLSKEQSAFLEESFKEHSTLNPKQKLA-----LAKQLNLRPRQVEVWFQNRRAR 228
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQ 107
K KQ+ V + ET+T R Q
Sbjct: 229 TKLKQTEVDCEYLKRCCETLTEENRRLQ 256
>gi|6678557|ref|NP_033527.1| ventral anterior homeobox 1 [Mus musculus]
gi|109896156|sp|Q2NKI2.2|VAX1_MOUSE RecName: Full=Ventral anterior homeobox 1
gi|3641258|gb|AAC36319.1| ventral anterior homeobox-containing protein 1 [Mus musculus]
gi|4589691|dbj|BAA76866.1| homeobox protein [Mus musculus]
Length = 338
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|414871037|tpg|DAA49594.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
mays]
Length = 648
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
TP Q++ LE VY EC P + Q + E I + WFQNRR R K++
Sbjct: 26 TPEQVEALERVYAECP-KPSSARRQQLLRECPILSNIEAKQIKVWFQNRRCRDKQR 80
>gi|326523973|dbj|BAJ96997.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 774
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K
Sbjct: 52 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMK 100
>gi|225449048|ref|XP_002274194.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Vitis
vinifera]
Length = 841
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
T Q++ LE VY EC P + Q + E I + WFQNRR R K+K+ V
Sbjct: 33 TAEQVEALERVYAECP-KPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQKKEAV 91
>gi|194884904|ref|XP_001976349.1| GG20068 [Drosophila erecta]
gi|190659536|gb|EDV56749.1| GG20068 [Drosophila erecta]
Length = 281
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T + AQL LE V++ + D + ELA +SE V WFQNRRA+
Sbjct: 121 RNRTTFSSAQLTALEKVFE-------RTHYPDAFVREELATKVHLSEARVQVWFQNRRAK 173
Query: 80 LKRKQSGV 87
+R + V
Sbjct: 174 FRRNERSV 181
>gi|125605887|gb|EAZ44923.1| hypothetical protein OsJ_29564 [Oryza sativa Japonica Group]
Length = 362
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+AR++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 174 SARKKLRLSKEQSAFLEESFKEHSTLNPKQKLA-----LAKQLNLRPRQVEVWFQNRRAR 228
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQ 107
K KQ+ V + ET+T R Q
Sbjct: 229 TKLKQTEVDCEYLKRCCETLTEENRRLQ 256
>gi|125564438|gb|EAZ09818.1| hypothetical protein OsI_32106 [Oryza sativa Indica Group]
Length = 815
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K
Sbjct: 129 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMK 177
>gi|89514853|gb|ABD75301.1| class III homeodomain-leucine zipper protein C3HDZ2 [Selaginella
kraussiana]
Length = 840
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY+EC P + Q + E I + WFQNRR R K+++
Sbjct: 22 TPEQVEALERVYNECP-KPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREKQRK 77
>gi|357617813|gb|EHJ71010.1| zerknullt [Danaus plexippus]
Length = 548
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
T R R T +QL LE+ + + + R ++I ELA + Q+SE + WFQNRR
Sbjct: 251 FTKRARTAYTSSQLVELENEFHQNRYLCRPRRI-----ELANYLQLSERQIKIWFQNRRM 305
Query: 79 RLKR 82
+ K+
Sbjct: 306 KYKK 309
>gi|332835117|ref|XP_003312832.1| PREDICTED: ventral anterior homeobox 1 isoform 2 [Pan troglodytes]
Length = 334
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|307172025|gb|EFN63619.1| BarH-like 1 homeobox protein [Camponotus floridanus]
Length = 341
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T AQ++ LE ++ K +++Q L+K+ +++ET + WFQNRR + K
Sbjct: 183 RPRTAFTAAQIKSLEAEFERNKYLSVAKRLQ-----LSKNLKLTETQIKIWFQNRRTKWK 237
Query: 82 RKQSGVV 88
RK + V
Sbjct: 238 RKYTNDV 244
>gi|70909343|ref|NP_570935.3| diencephalon/mesencephalon homeobox protein 1 isoform a [Mus
musculus]
gi|81916299|sp|Q91ZK4.1|DMBX1_MOUSE RecName: Full=Diencephalon/mesencephalon homeobox protein 1;
AltName: Full=Diencephalon/mesencephalon-expressed brain
homeobox gene 1 protein; AltName: Full=Orthodenticle
homolog 3; AltName: Full=Paired-like homeobox protein
DMBX1; AltName: Full=Paired-type homeobox Atx
gi|16903551|gb|AAL30508.1|AF421857_1 paired-like homeobox protein DMBX1 [Mus musculus]
gi|18390053|gb|AAL68836.1|AF463513_1 cerebellar-diencephalic-mesencephalic homeobox protein [Mus
musculus]
Length = 381
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 73 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 125
Query: 80 LKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H E + + P S LE PP
Sbjct: 126 FRKKQRSLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPP 168
>gi|2495273|sp|P55813.1|HBX4_ECHGR RecName: Full=Homeobox protein EgHBX4
Length = 60
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R+R TP QL+ +E V+ G R + M ELA I+E+ + WF+NRRA+L+
Sbjct: 3 RERTIYTPEQLEAMEEVF----GVNRYPDV-SMREELASRLGINESKIQVWFKNRRAKLR 57
>gi|410967187|ref|XP_003990103.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Felis catus]
Length = 379
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 73 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 125
Query: 80 LKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H ES+ + P LE PP
Sbjct: 126 FRKKQRSLQKEQLQKQKEAEGSHGESKAEAPTPDTQLETDQPP 168
>gi|395828009|ref|XP_003787179.1| PREDICTED: ventral anterior homeobox 1 [Otolemur garnettii]
Length = 333
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|359489287|ref|XP_002272752.2| PREDICTED: homeobox-leucine zipper protein HAT3-like [Vitis
vinifera]
Length = 390
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 73
+G T R++ + Q ILE + E KQK+ LAK + V WF
Sbjct: 209 AGGTGDTVRKKLRLSKEQSAILEETFKEHNTLNPKQKL-----ALAKQLNLRPRQVEVWF 263
Query: 74 QNRRARLKRKQSGVVPNNAESEAETVTHAESRKQ 107
QNRRAR K KQ+ V + E +T R Q
Sbjct: 264 QNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQ 297
>gi|110430672|gb|ABG73462.1| homeodomain transcription factor [Oryza brachyantha]
Length = 844
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K
Sbjct: 134 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMK 182
>gi|440903087|gb|ELR53792.1| Ventral anterior homeobox 1 [Bos grunniens mutus]
Length = 248
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|194042096|ref|XP_001927274.1| PREDICTED: ventral anterior homeobox 1-like [Sus scrofa]
Length = 333
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|162951873|ref|NP_001106175.1| ventral anterior homeobox 1 isoform a [Homo sapiens]
gi|332211895|ref|XP_003255053.1| PREDICTED: ventral anterior homeobox 1 isoform 2 [Nomascus
leucogenys]
gi|74743553|sp|Q5SQQ9.1|VAX1_HUMAN RecName: Full=Ventral anterior homeobox 1
gi|119569817|gb|EAW49432.1| ventral anterior homeobox 1, isoform CRA_a [Homo sapiens]
Length = 334
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|52631648|gb|AAU85249.1| empty spiracles protein, partial [Tegenaria saeva]
Length = 129
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Query: 28 TPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
+P+QL LEH ++ G RKQ Q ++ ++ET V WFQNRR + KR++
Sbjct: 3 SPSQLLKLEHAFENDHYVVGAERKQLAQSLS--------LTETQVKVWFQNRRTKHKRQK 54
>gi|195145212|ref|XP_002013590.1| GL24224 [Drosophila persimilis]
gi|194102533|gb|EDW24576.1| GL24224 [Drosophila persimilis]
Length = 491
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK LA+ +SET V WFQNRR
Sbjct: 387 RIRTAFSPSQLLKLEHAFESNQYVVGAERK--------ALAQSLNLSETQVKVWFQNRRT 438
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 439 KHKRMQ 444
>gi|113120207|gb|ABI30251.1| Rx1 [Nematostella vectensis]
Length = 243
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTA--ELAKHGQISETNVYNWFQNRRAR 79
R R T T QLQ LE V++ K+ D+ ELA ISE + WFQNRRA+
Sbjct: 70 RNRTTFTKQQLQELEKVFE-------KKHYPDIALREELAAKINISEARIQVWFQNRRAK 122
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP 109
++ Q+ PN++ + + H + + Q P
Sbjct: 123 WRKLQN---PNHSLLKKNRLHHEKLQGQLP 149
>gi|31142|emb|CAA48751.1| EMX2 [Homo sapiens]
Length = 158
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 62 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 113
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 114 KFKRQK 119
>gi|73998643|ref|XP_865035.1| PREDICTED: ventral anterior homeobox 1 isoform 3 [Canis lupus
familiaris]
Length = 334
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|403260930|ref|XP_003922902.1| PREDICTED: uncharacterized protein LOC101028463 [Saimiri
boliviensis boliviensis]
Length = 680
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 494 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 548
Query: 82 RKQS 85
+ QS
Sbjct: 549 KDQS 552
>gi|403260120|ref|XP_003922534.1| PREDICTED: uncharacterized protein LOC101034476 [Saimiri
boliviensis boliviensis]
Length = 413
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ ++ ++ET V WFQNRR
Sbjct: 317 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLS--------LTETQVKVWFQNRRT 368
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 369 KFKRQK 374
>gi|350593105|ref|XP_003483611.1| PREDICTED: ventral anterior homeobox 1-like [Sus scrofa]
Length = 265
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 34 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 88
Query: 82 RKQ 84
+ Q
Sbjct: 89 KDQ 91
>gi|110349512|gb|ABG73231.1| class III HD-Zip protein HDZ31 [Selaginella kraussiana]
Length = 825
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY+EC P + Q + E I + WFQNRR R K+++
Sbjct: 7 TPEQVEALERVYNECP-KPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREKQRK 62
>gi|82223371|sp|Q9PVN2.1|VAX1_CHICK RecName: Full=Ventral anterior homeobox 1
gi|5881591|dbj|BAA84282.1| homeodomain protein [Gallus gallus]
Length = 327
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 101 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 155
Query: 82 RKQ 84
+ Q
Sbjct: 156 KDQ 158
>gi|19173075|ref|NP_597626.1| similarity to LIM-HOMEOBOX PROTEIN LMX1_MESAU [Encephalitozoon
cuniculi GB-M1]
gi|51701602|sp|Q8SW18.1|HD10_ENCCU RecName: Full=Homeobox protein HD-10; AltName: Full=EcHD-10
gi|19168742|emb|CAD26261.1| similarity to LIM-HOMEOBOX PROTEIN LMX1_MESAU [Encephalitozoon
cuniculi GB-M1]
gi|30793778|tpg|DAA01304.1| TPA_exp: homeodomain protein EcHD-10 [Encephalitozoon cuniculi]
gi|449329692|gb|AGE95962.1| lim-homeobox protein [Encephalitozoon cuniculi]
Length = 227
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ 63
GN YFDP+ + R T AQL++LE + E P +M +L +
Sbjct: 22 GNQYFDPYFV--------KHRKRTTKAQLKVLEETF-ETNIRPDA----NMRKKLGEQLG 68
Query: 64 ISETNVYNWFQNRRARLKR 82
++ +V WFQNRRA++K+
Sbjct: 69 MTPRSVQVWFQNRRAKIKK 87
>gi|47211599|emb|CAF94535.1| unnamed protein product [Tetraodon nigroviridis]
Length = 276
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 72 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 126
Query: 82 RKQ 84
+ Q
Sbjct: 127 KDQ 129
>gi|31339103|dbj|BAC77158.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
Length = 790
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 2 RMGNPYFDPFVASGSQKL------TARQRWTP----TPAQLQILEHVYDECKGTPRKQKI 51
R G+ + D A+G + +R+R TP Q+Q LE ++ EC KQ+
Sbjct: 56 RSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQR- 114
Query: 52 QDMTAELAKHGQISETNVYNWFQNRRARLK 81
AEL++ + V WFQNRR ++K
Sbjct: 115 ----AELSRRLSLDARQVKFWFQNRRTQMK 140
>gi|354470038|ref|XP_003497403.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cricetulus griseus]
Length = 383
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 73 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 125
Query: 80 LKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H E + + P S LE PP
Sbjct: 126 FRKKQRSLQKEQLQKQKEAEGSHGEGKMEAPASDTQLEADQPP 168
>gi|255559376|ref|XP_002520708.1| conserved hypothetical protein [Ricinus communis]
gi|223540093|gb|EEF41670.1| conserved hypothetical protein [Ricinus communis]
Length = 957
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 22 RQRWTPTPAQLQILEH-VYDECKGTPRKQKIQDMTAELAKHG-QISETNVYNWFQNRRAR 79
R+R Q+ ++E + DE +Q +L+ HG +++ + + NW NR+AR
Sbjct: 729 RKRTIMNEYQMSLIEEALVDEPDMHRNAASLQSWADKLSLHGSEVTSSQLKNWLNNRKAR 788
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSA 119
L R +G + + E V HA S KQ+ +++ DS+
Sbjct: 789 LARAGAG---KDVRTPME-VDHALSEKQSVPALRHSHDSS 824
>gi|195114566|ref|XP_002001838.1| GI14821 [Drosophila mojavensis]
gi|193912413|gb|EDW11280.1| GI14821 [Drosophila mojavensis]
Length = 617
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMT-AELAKHGQISETNVYNWFQNRRARL 80
R R T + AQL+ LE ++ R Q T ELA+ ++E + WF NRRARL
Sbjct: 205 RCRTTFSAAQLEELERAFE------RTQYPDIFTREELAQRTNLTEARIQVWFSNRRARL 258
Query: 81 KRKQSGVVPNNAESEAETV 99
+++ + V +++ + T
Sbjct: 259 RKQHNSVTGSSSSTATPTA 277
>gi|125605524|gb|EAZ44560.1| hypothetical protein OsJ_29180 [Oryza sativa Japonica Group]
Length = 183
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQ-DMTAELAKHGQISETNVYNWF 73
GS AR+R T Q++ LE ++E K+K++ + +ELA+ I+ V WF
Sbjct: 75 GSSSAAARKR-RLTAEQVRALERSFEE-----EKRKLEPERKSELARRLGIAPRQVAVWF 128
Query: 74 QNRRARLKRKQ 84
QNRRAR K KQ
Sbjct: 129 QNRRARWKTKQ 139
>gi|123907341|sp|Q28ET4.1|VENT1_XENTR RecName: Full=Homeobox protein vent1; Short=Vent-1
gi|89269893|emb|CAJ83433.1| vent-1 [Xenopus (Silurana) tropicalis]
gi|197246643|gb|AAI68413.1| VENT homeobox 1, gene 2 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 13/77 (16%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
L R R TP Q+ LE +++ + G ++K LA Q+SE V WFQNR
Sbjct: 126 LQRRLRTAFTPQQITRLEQAFNKQRYLGASERKK-------LATSLQLSEIQVKTWFQNR 178
Query: 77 RARLKR----KQSGVVP 89
R +LKR +Q +VP
Sbjct: 179 RMKLKRQIQDQQHSMVP 195
>gi|115447877|ref|NP_001047718.1| Os02g0674800 [Oryza sativa Japonica Group]
gi|75121322|sp|Q6EPF0.1|ROC5_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC5; AltName:
Full=GLABRA 2-like homeobox protein 5; AltName:
Full=HD-ZIP protein ROC5; AltName: Full=Homeodomain
transcription factor ROC5; AltName: Full=Protein RICE
OUTERMOST CELL-SPECIFIC 5
gi|50253214|dbj|BAD29470.1| GL2-type homeobox genes [Oryza sativa Japonica Group]
gi|113537249|dbj|BAF09632.1| Os02g0674800 [Oryza sativa Japonica Group]
gi|222623431|gb|EEE57563.1| hypothetical protein OsJ_07908 [Oryza sativa Japonica Group]
Length = 804
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 2 RMGNPYFDPFVASGSQKL------TARQRWTP----TPAQLQILEHVYDECKGTPRKQKI 51
R G+ + D A+G + +R+R TP Q+Q LE ++ EC KQ+
Sbjct: 70 RSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQR- 128
Query: 52 QDMTAELAKHGQISETNVYNWFQNRRARLK 81
AEL++ + V WFQNRR ++K
Sbjct: 129 ----AELSRRLSLDARQVKFWFQNRRTQMK 154
>gi|403260122|ref|XP_003922535.1| PREDICTED: ventral anterior homeobox 1 [Saimiri boliviensis
boliviensis]
Length = 315
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|348587224|ref|XP_003479368.1| PREDICTED: LOW QUALITY PROTEIN: ventral anterior homeobox 1-like
[Cavia porcellus]
Length = 346
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 114 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 168
Query: 82 RKQ 84
+ Q
Sbjct: 169 KDQ 171
>gi|218191344|gb|EEC73771.1| hypothetical protein OsI_08446 [Oryza sativa Indica Group]
Length = 804
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 2 RMGNPYFDPFVASGSQKL------TARQRWTP----TPAQLQILEHVYDECKGTPRKQKI 51
R G+ + D A+G + +R+R TP Q+Q LE ++ EC KQ+
Sbjct: 70 RSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQR- 128
Query: 52 QDMTAELAKHGQISETNVYNWFQNRRARLK 81
AEL++ + V WFQNRR ++K
Sbjct: 129 ----AELSRRLSLDARQVKFWFQNRRTQMK 154
>gi|125774911|ref|XP_001358707.1| GA15560 [Drosophila pseudoobscura pseudoobscura]
gi|54638448|gb|EAL27850.1| GA15560 [Drosophila pseudoobscura pseudoobscura]
Length = 493
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK LA+ +SET V WFQNRR
Sbjct: 389 RIRTAFSPSQLLKLEHAFESNQYVVGAERK--------ALAQSLNLSETQVKVWFQNRRT 440
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 441 KHKRMQ 446
>gi|31339105|dbj|BAC77159.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
Length = 131
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K+ Q
Sbjct: 9 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQ 60
>gi|359479221|ref|XP_002279963.2| PREDICTED: uncharacterized protein LOC100265339 [Vitis vinifera]
Length = 528
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
++R TP+Q+Q LE Y+E K + M +ELA+ ++E + WF +RR + K
Sbjct: 20 KKRRLKTPSQVQALEKFYNE-----HKYPTESMKSELAEEIGLTEKQISGWFCHRRLKDK 74
Query: 82 R-------------KQSGVVPNNA----ESEAETVTHAESRKQNPESIQS 114
+ + SGV+ + + + H + R +P ++S
Sbjct: 75 KLLEDEAGANGRQDRSSGVIQDRGSGYRQDSCGSTKHGDYRHIDPREVES 124
>gi|296221307|ref|XP_002756674.1| PREDICTED: ventral anterior homeobox 1 [Callithrix jacchus]
Length = 335
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|50253605|gb|AAT72005.1| vent1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 13/77 (16%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
L R R TP Q+ LE +++ + G ++K LA Q+SE V WFQNR
Sbjct: 126 LQRRLRTAFTPQQITRLEQAFNKQRYLGASERKK-------LATSLQLSEIQVKTWFQNR 178
Query: 77 RARLKR----KQSGVVP 89
R +LKR +Q +VP
Sbjct: 179 RMKLKRQIQDQQHSMVP 195
>gi|414871782|tpg|DAA50339.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
mays]
Length = 174
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 34 TPEQVEALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
>gi|355783135|gb|EHH65056.1| hypothetical protein EGM_18399, partial [Macaca fascicularis]
Length = 157
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 61 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 112
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 113 KFKRQK 118
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 44/154 (28%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVY 70
A+G +K R R T T QL+ +E V+ +K D M +LA ++E V
Sbjct: 105 AAGDKKKKRRNRTTFTSFQLEEMERVF-------QKTHYPDVYMREQLALRADLTEARVQ 157
Query: 71 NWFQNRRARLKRKQS------------GVVP--------NNAESEAE-----TVTHAESR 105
WFQNRRA+ ++K+ G P N ++A+ T T+A
Sbjct: 158 VWFQNRRAKWRKKERFQQMAGIRQVALGADPYDISMGQRQNGYTQAQPTQWTTTTNASCM 217
Query: 106 --KQNPES--------IQSLEDSAPPPRDEDIYP 129
+ NP S + L ++PP +ED YP
Sbjct: 218 APQSNPASFMGVATQALSYLTSASPPTTNEDTYP 251
>gi|300798700|ref|NP_001178071.1| ventral anterior homeobox 1 [Bos taurus]
gi|296472631|tpg|DAA14746.1| TPA: ventral anterior homeobox 1-like [Bos taurus]
Length = 334
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|224113651|ref|XP_002332526.1| predicted protein [Populus trichocarpa]
gi|60327625|gb|AAX19052.1| class III HD-Zip protein 3 [Populus trichocarpa]
gi|222832638|gb|EEE71115.1| predicted protein [Populus trichocarpa]
Length = 843
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQS 85
TP Q++ LE VY EC P + Q + E I + WFQNRR R K RK+S
Sbjct: 21 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILCNIEPKQIKVWFQNRRCREKQRKES 78
>gi|109090667|ref|XP_001095268.1| PREDICTED: ventral anterior homeobox 1 isoform 1 [Macaca mulatta]
gi|402881599|ref|XP_003904355.1| PREDICTED: ventral anterior homeobox 1 [Papio anubis]
Length = 333
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|380799409|gb|AFE71580.1| homeobox protein EMX2 isoform 1, partial [Macaca mulatta]
Length = 153
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G RKQ LA ++ET V WFQNRR
Sbjct: 57 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRT 108
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 109 KFKRQK 114
>gi|354503916|ref|XP_003514026.1| PREDICTED: paired mesoderm homeobox protein 2-like [Cricetulus
griseus]
Length = 281
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 142 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 194
Query: 88 VPNNAESEAETVTHAESRKQ---------NPESI----QSLEDSAPPPRDEDIYPQSPDL 134
+ + S ++ + +Q +PE + S S PP P +P +
Sbjct: 195 LATRSASLLKSYGQEAAIEQPVAPRPTALSPEYLSWPASSPYSSVPPYSPGGSSPTTPGV 254
Query: 135 GIDQMIGKMEIPGS-FSFH 152
+ I + + FS H
Sbjct: 255 NMANSIASLRLKAKEFSLH 273
>gi|671861|emb|CAA35965.1| empty spiracles homeotic protein [Drosophila melanogaster]
gi|226721|prf||1604244A empty spiracles gene
Length = 494
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK Q++ +SET V WFQNRR
Sbjct: 390 RIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLN--------LSETQVKVWFQNRRT 441
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 442 KHKRMQ 447
>gi|289629212|ref|NP_001166190.1| zerknullt [Bombyx mori]
gi|289063230|dbj|BAI77431.1| zerknullt [Bombyx mori]
Length = 549
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
T R R T +QL LE+ + + + R ++I ELA + Q+SE + WFQNRR
Sbjct: 251 FTKRARTAYTSSQLVELENEFHQNRYLCRPRRI-----ELANYLQLSERQIKIWFQNRRM 305
Query: 79 RLKR 82
+ K+
Sbjct: 306 KYKK 309
>gi|296083843|emb|CBI24231.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 22/110 (20%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
++R TP+Q+Q LE Y+E K + M +ELA+ ++E + WF +RR + K
Sbjct: 20 KKRRLKTPSQVQALEKFYNE-----HKYPTESMKSELAEEIGLTEKQISGWFCHRRLKDK 74
Query: 82 R-------------KQSGVVPNNA----ESEAETVTHAESRKQNPESIQS 114
+ + SGV+ + + + H + R +P ++S
Sbjct: 75 KLLEDEAGANGRQDRSSGVIQDRGSGYRQDSCGSTKHGDYRHIDPREVES 124
>gi|170035845|ref|XP_001845777.1| nk homeobox protein [Culex quinquefasciatus]
gi|167878301|gb|EDS41684.1| nk homeobox protein [Culex quinquefasciatus]
Length = 327
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQ 84
AELAK +++ET V WFQNRR + KRKQ
Sbjct: 242 AELAKSLRLTETQVKIWFQNRRYKTKRKQ 270
>gi|66809961|ref|XP_638704.1| hypothetical protein DDB_G0284293 [Dictyostelium discoideum AX4]
gi|74996893|sp|Q54PU1.1|HBX10_DICDI RecName: Full=Homeobox protein 10; Short=DdHbx-10
gi|60467302|gb|EAL65335.1| hypothetical protein DDB_G0284293 [Dictyostelium discoideum AX4]
Length = 638
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
++R +P QL ILE ++ E P +Q + LA +S V WFQN+RA++K
Sbjct: 303 KKRQRTSPEQLAILEQIF-ETDKMPSQQ----IRVRLANQLGMSSRRVQIWFQNKRAKVK 357
Query: 82 R 82
R
Sbjct: 358 R 358
>gi|410967185|ref|XP_003990102.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Felis catus]
Length = 374
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 68 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 120
Query: 80 LKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H ES+ + P LE PP
Sbjct: 121 FRKKQRSLQKEQLQKQKEAEGSHGESKAEAPTPDTQLETDQPP 163
>gi|326505494|dbj|BAJ95418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 867
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q+ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 46 TPEQVDALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 101
>gi|54402405|gb|AAV34757.1| PHA-2, partial [Caenorhabditis elegans]
Length = 170
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 20/116 (17%)
Query: 7 YFDPFVASGSQKLTARQ-RWTPTPAQLQILEHVYDECKG-TPRKQKIQDMTAELAKHGQI 64
+ P+++ QK Q R+T Q LEH +D K +P+++K +LAK +
Sbjct: 68 WLYPYMSKSPQKRKGGQIRFTN--EQTDALEHKFDSHKYLSPQERK------KLAKSLSL 119
Query: 65 SETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
SE V WFQNRRA+ +R V + E E E A +R S+ L+ S P
Sbjct: 120 SERQVKTWFQNRRAKWRR-----VRKDGEDEDEMPNGASAR-----SLGQLQSSNP 165
>gi|431895409|gb|ELK04925.1| Ventral anterior homeobox 1 [Pteropus alecto]
Length = 227
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 93 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 147
Query: 82 RKQ 84
+ Q
Sbjct: 148 KDQ 150
>gi|70909349|ref|NP_001020738.1| diencephalon/mesencephalon homeobox protein 1 isoform b [Mus
musculus]
gi|16903553|gb|AAL30509.1|AF421858_1 paired-like homeobox protein DMBX1 [Mus musculus]
gi|21902328|gb|AAM78514.1|AF499446_1 PRD class homeobox protein [Mus musculus]
gi|30047398|gb|AAH50912.1| Diencephalon/mesencephalon homeobox 1 [Mus musculus]
gi|148698681|gb|EDL30628.1| diencephalon/mesencephalon homeobox 1, isoform CRA_a [Mus musculus]
gi|148698682|gb|EDL30629.1| diencephalon/mesencephalon homeobox 1, isoform CRA_a [Mus musculus]
Length = 376
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 68 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 120
Query: 80 LKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H E + + P S LE PP
Sbjct: 121 FRKKQRSLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPP 163
>gi|402586593|gb|EJW80530.1| hypothetical protein WUBG_08564, partial [Wuchereria bancrofti]
Length = 134
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
+R+R T QL +LE+ + +C+ P+ D+ +LA Q+ E + WF+NRRA+
Sbjct: 55 SRRRTAFTDEQLSLLENAFQKCQ-YPK----MDVRMKLASEVQLPEKRIQVWFKNRRAKY 109
Query: 81 KRKQSGV 87
+++ +
Sbjct: 110 RKRLRNI 116
>gi|195111022|ref|XP_002000078.1| GI10044 [Drosophila mojavensis]
gi|193916672|gb|EDW15539.1| GI10044 [Drosophila mojavensis]
Length = 514
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK LA+ +SET V WFQNRR
Sbjct: 408 RIRTAFSPSQLLKLEHAFESNQYVVGAERK--------ALAQSLNLSETQVKVWFQNRRT 459
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 460 KHKRMQ 465
>gi|45360949|ref|NP_988861.1| homeobox protein vent1 [Xenopus (Silurana) tropicalis]
gi|28200479|gb|AAO31758.1| vent-1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 13/77 (16%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
L R R TP Q+ LE +++ + G ++K LA Q+SE V WFQNR
Sbjct: 126 LQRRLRTAFTPQQITRLEQAFNKQRYLGASERKK-------LATSLQLSEIQVKTWFQNR 178
Query: 77 RARLKR----KQSGVVP 89
R +LKR +Q +VP
Sbjct: 179 RMKLKRQIQDQQPSMVP 195
>gi|45479746|gb|AAS66760.1| PHAVOLUTA-like HD-ZIPIII protein [Nicotiana sylvestris]
Length = 843
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 21 TPEQVEALERVYAECP-KPTSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 76
>gi|414871038|tpg|DAA49595.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
mays]
Length = 835
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
TP Q++ LE VY EC P + Q + E I + WFQNRR R K++
Sbjct: 26 TPEQVEALERVYAECP-KPSSARRQQLLRECPILSNIEAKQIKVWFQNRRCRDKQR 80
>gi|345649198|gb|AEO14130.1| RHOXF2 protein [Erythrocebus patas]
Length = 283
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
TP QLQ LE ++ +K + + LA+ ++E +V WF+NRRA+ +R Q +
Sbjct: 137 TPLQLQELERIFQR-----KKFPSEFLRRRLARSMNMTELSVQIWFENRRAKWRRHQRAL 191
Query: 88 VPNN 91
+ N
Sbjct: 192 MARN 195
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVY 70
A+G +K R R T T QL+ +E V+ +K D M +LA ++E V
Sbjct: 105 AAGDKKKKRRNRTTFTSFQLEEMERVF-------QKTHYPDVYMREQLALRADLTEARVQ 157
Query: 71 NWFQNRRARLKRKQ 84
WFQNRRA+ ++K+
Sbjct: 158 VWFQNRRAKWRKKE 171
>gi|218195394|gb|EEC77821.1| hypothetical protein OsI_17027 [Oryza sativa Indica Group]
Length = 849
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ AEL+K + V WFQNRR ++K
Sbjct: 128 TPQQIQELEAMFKECPHPDEKQR-----AELSKRLGLEPRQVKFWFQNRRTQMK 176
>gi|149061280|gb|EDM11703.1| similar to Hmx2 protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 104
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAES 104
A LA Q++ET V WFQNRR + KR+ S AE EA + HA +
Sbjct: 11 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASA 53
>gi|357120582|ref|XP_003562005.1| PREDICTED: homeobox-leucine zipper protein HOX32-like
[Brachypodium distachyon]
Length = 861
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q+ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 40 TPEQVDALERVYSECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 95
>gi|222629392|gb|EEE61524.1| hypothetical protein OsJ_15826 [Oryza sativa Japonica Group]
Length = 833
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ AEL+K + V WFQNRR ++K
Sbjct: 112 TPQQIQELEAMFKECPHPDEKQR-----AELSKRLGLEPRQVKFWFQNRRTQMK 160
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 44/154 (28%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVY 70
A+G +K R R T T QL+ +E V+ +K D M +LA ++E V
Sbjct: 105 AAGDKKKKRRNRTTFTSFQLEEMERVF-------QKTHYPDVYMREQLALRADLTEARVQ 157
Query: 71 NWFQNRRARLKRKQS------------GVVP--------NNAESEAE-----TVTHAESR 105
WFQNRRA+ ++K+ G P N ++A+ T T+A
Sbjct: 158 VWFQNRRAKWRKKERFQQMAGIRQVALGADPYDISMGQRQNGYTQAQPTQWTTTTNASCM 217
Query: 106 --KQNPESIQS--------LEDSAPPPRDEDIYP 129
+ NP S L ++PP +ED YP
Sbjct: 218 APQSNPASFMGVATQAHSYLTSASPPTTNEDTYP 251
>gi|195392407|ref|XP_002054849.1| GJ22569 [Drosophila virilis]
gi|194152935|gb|EDW68369.1| GJ22569 [Drosophila virilis]
Length = 496
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK Q + +SET V WFQNRR
Sbjct: 392 RIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQSLN--------LSETQVKVWFQNRRT 443
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 444 KHKRMQ 449
>gi|115480263|ref|NP_001063725.1| Os09g0526300 [Oryza sativa Japonica Group]
gi|113631958|dbj|BAF25639.1| Os09g0526300, partial [Oryza sativa Japonica Group]
Length = 131
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K+ Q
Sbjct: 9 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQ 60
>gi|426240289|ref|XP_004023328.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein MIXL1, partial
[Ovis aries]
Length = 163
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
V+S SQ+ R+R + P QLQ+LE V+ R+ D + LA + E+ +
Sbjct: 12 VSSASQR---RKRTSFRPEQLQLLELVF-------RRTMYPDIHLRERLAALTLLPESRI 61
Query: 70 YNWFQNRRARLKRKQSG 86
WFQNRRA+ R+QSG
Sbjct: 62 QVWFQNRRAK-SRRQSG 77
>gi|354470034|ref|XP_003497402.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cricetulus griseus]
gi|344238464|gb|EGV94567.1| Diencephalon/mesencephalon homeobox protein 1 [Cricetulus griseus]
Length = 378
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 68 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 120
Query: 80 LKRKQSGVVPNNAESEAET-VTHAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H E + + P S LE PP
Sbjct: 121 FRKKQRSLQKEQLQKQKEAEGSHGEGKMEAPASDTQLEADQPP 163
>gi|302694779|ref|XP_003037068.1| hypothetical protein SCHCODRAFT_269958 [Schizophyllum commune H4-8]
gi|300110765|gb|EFJ02166.1| hypothetical protein SCHCODRAFT_269958 [Schizophyllum commune H4-8]
Length = 671
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 23 QRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
QR PTP QL L +++ + +Q+ Q LA+ + + NWFQN+R+ K
Sbjct: 130 QRNRPTPEQLDELRKLFETTQHPSTEQRTQ-----LAERIGMKYQTITNWFQNQRSVYKN 184
Query: 83 KQSGVVPN------NAESEAETVTHAESRKQNPESIQSLEDSAPPPRDE-DIYPQSPDLG 135
K++ PN + + A V+ P + SL S PPP +P+ P L
Sbjct: 185 KRAPGNPNLLWGSSSLSTTAPAVSAPAQPLPPPSTHPSLGLSGPPPLSSISAHPRLPSLP 244
Query: 136 I 136
I
Sbjct: 245 I 245
>gi|242276440|gb|ACS91461.1| EmxB [Petromyzon marinus]
Length = 285
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH +++ G+ RKQ LA +SET V WFQNRR
Sbjct: 189 RIRTAFSPSQLLRLEHAFEKNHYVVGSERKQ--------LASSLSLSETQVKVWFQNRRT 240
Query: 79 RLKRKQ 84
+ KR++
Sbjct: 241 KHKRQK 246
>gi|147903547|ref|NP_001081294.1| homeobox protein Mix.1 [Xenopus laevis]
gi|1170320|sp|P21711.2|MIX1_XENLA RecName: Full=Homeobox protein Mix.1
gi|532661|gb|AAA49903.1| homeobox protein [Xenopus laevis]
Length = 377
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
+P D + SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 84 SPTADASLVPASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 135
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 136 PESRIQVWFQNRRAKVRRQ 154
>gi|449454480|ref|XP_004144982.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
[Cucumis sativus]
gi|449473159|ref|XP_004153804.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
[Cucumis sativus]
gi|449522284|ref|XP_004168157.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
[Cucumis sativus]
Length = 841
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K
Sbjct: 142 TPQQIQELEAVFKECPHPDEKQRL-----ELSRRLCLETRQVKFWFQNRRTQMK 190
>gi|356555875|ref|XP_003546255.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
max]
Length = 846
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 23 TPEQVEALERVYAECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 78
>gi|355562809|gb|EHH19403.1| hypothetical protein EGK_20101 [Macaca mulatta]
Length = 210
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|269784949|ref|NP_001161626.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
gi|268054257|gb|ACY92615.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
Length = 242
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 12 VASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNV 69
+ S K R R T T QL LE V++ + D + ELAK +SE V
Sbjct: 91 IQSKKAKKQRRSRTTFTTNQLGALEKVFE-------RTHYPDAFVREELAKKVDLSEARV 143
Query: 70 YNWFQNRRARLKRKQSGVV 88
WFQNRRA+ +R + V+
Sbjct: 144 QVWFQNRRAKYRRNERNVL 162
>gi|73998968|ref|XP_544055.2| PREDICTED: homeobox protein HMX2 [Canis lupus familiaris]
Length = 273
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAES 104
A LA Q++ET V WFQNRR + KR+ S AE EA + HA +
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASA 222
>gi|45382187|ref|NP_990130.1| ventral anterior homeobox 1 [Gallus gallus]
gi|6635939|gb|AAF20017.1|AF117299_1 Vax [Gallus gallus]
Length = 326
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 101 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 155
Query: 82 RKQ 84
+ Q
Sbjct: 156 KDQ 158
>gi|260791956|ref|XP_002590993.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276193|gb|EEN47004.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 320
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 13 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVY 70
A+G +K R R T T QL+ +E V+ +K D M +LA ++E V
Sbjct: 112 AAGDKKKKRRNRTTFTSFQLEEMERVF-------QKTHYPDVYMREQLALRADLTEARVQ 164
Query: 71 NWFQNRRARLKRKQ 84
WFQNRRA+ ++K+
Sbjct: 165 VWFQNRRAKWRKKE 178
>gi|363583670|gb|AEW27302.1| ventral anterior homeobox 1 [Columba livia]
Length = 276
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 83 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 137
Query: 82 RKQ 84
+ Q
Sbjct: 138 KDQ 140
>gi|355713903|gb|AES04824.1| paired related homeobox 1 [Mustela putorius furo]
Length = 109
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T +QLQ LE V++ + +LA+ ++E V WFQNRRA+ +
Sbjct: 6 RNRTTFNSSQLQALERVFERTHYPD-----AFVREDLARRVNLTEARVQVWFQNRRAKFR 60
Query: 82 RKQSGVVPNNAES 94
R + ++ N S
Sbjct: 61 RNERAMLANKNAS 73
>gi|308489528|ref|XP_003106957.1| CRE-PHA-2 protein [Caenorhabditis remanei]
gi|308252845|gb|EFO96797.1| CRE-PHA-2 protein [Caenorhabditis remanei]
Length = 215
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 3 MGNPYFDP------FVASGSQKLTARQ-RWTPTPAQLQILEHVYDECKG-TPRKQKIQDM 54
MGN FDP +++ QK Q R+T Q LEH +D K +P+++K
Sbjct: 105 MGN-VFDPRAWLYPYLSKSPQKRKGGQIRFTNE--QTDALEHKFDSHKYLSPQERK---- 157
Query: 55 TAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
+LAK +SE V WFQNRRA+ +R V + E E E A +R
Sbjct: 158 --KLAKSLSLSERQVKTWFQNRRAKWRR-----VRKDGEDEDEMPNGASAR 201
>gi|11225250|gb|AAG33015.1|AF308821_1 Mnx homeodomain protein [Branchiostoma floridae]
Length = 296
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T R R T QL LE + E K R ++ + TA + ++ET V WFQNRR +
Sbjct: 155 TRRPRTAFTSQQLLELEKYFKENKYLSRPKRFEVATALM-----LTETQVKIWFQNRRMK 209
Query: 80 LKRKQSG---VVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDI 127
KR + V + + + + VT + S+ +P+ ++ D + P DED
Sbjct: 210 WKRSKKAKDEVTQDKSTNGSSKVTES-SKMDDPKDTYNMADLSDP--DEDC 257
>gi|31339101|dbj|BAC77157.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
Length = 813
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ AEL+K + V WFQNRR ++K
Sbjct: 112 TPQQIQELEAMFKECPHPDEKQR-----AELSKRLGLEPRQVKFWFQNRRTQMK 160
>gi|357614147|gb|EHJ68936.1| putative Homeobox protein bagpipe [Danaus plexippus]
Length = 385
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQ-----SGVVPNNAESEAETV 99
A+LA +++ET V WFQNRR + KRKQ SG++ N+A A V
Sbjct: 193 ADLAVSLKLTETQVKIWFQNRRYKTKRKQMQLQESGLLANHARKVAVKV 241
>gi|353244551|emb|CCA75920.1| hypothetical protein PIIN_09916, partial [Piriformospora indica DSM
11827]
Length = 802
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 32 LQILEHVYDECKGTP---RKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQS-GV 87
+ +LE+V++ G P K++IQ T ++ V WFQNRRAR K+K++ G
Sbjct: 213 IALLEYVFNRQNGYPSVGEKKRIQQETG-------LTYRQVAVWFQNRRAREKKKKAEGR 265
Query: 88 VPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
VP ++EA + E + + E++ S D P
Sbjct: 266 VPVPVDAEA-AIAQIEDEQAH-EAVVSAPDPTP 296
>gi|242039345|ref|XP_002467067.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
gi|241920921|gb|EER94065.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
Length = 838
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQS 85
TP Q++ LE VY EC P + Q + E I + WFQNRR R K RK+S
Sbjct: 32 TPEQVETLERVYAECP-KPSSARRQQLLRECPILSNIEPKQIKVWFQNRRCRDKQRKES 89
>gi|255564395|ref|XP_002523194.1| conserved hypothetical protein [Ricinus communis]
gi|223537601|gb|EEF39225.1| conserved hypothetical protein [Ricinus communis]
Length = 771
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 28 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 83
>gi|224106608|ref|XP_002314223.1| predicted protein [Populus trichocarpa]
gi|222850631|gb|EEE88178.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+AR++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 36 SARKKLRLSKEQSSFLEESFKEHNTLTPKQKLA-----LAKELNLRPRQVEVWFQNRRAR 90
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPE--SIQSLEDSAP 120
K KQ+ V + ET+T E+R+ + E +++L+ S P
Sbjct: 91 TKLKQTEVDCEYLKRCCETLTE-ENRRLHKELQELRALKTSNP 132
>gi|545159|gb|AAB29806.1| homeobox gene NvHBox-6 product {type 1 homeodomain}
[Notophthalmus viridescens=newts, tail, Peptide
Partial, 56 aa]
Length = 56
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Query: 28 TPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
+P+QL LEH +++ G RKQ LA ++ET V WFQNRR + KR++
Sbjct: 5 SPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRTKFKRQK 56
>gi|395502019|ref|XP_003755384.1| PREDICTED: ventral anterior homeobox 1 [Sarcophilus harrisii]
Length = 327
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 101 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 155
Query: 82 RKQ 84
+ Q
Sbjct: 156 KDQ 158
>gi|356533043|ref|XP_003535078.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
max]
Length = 846
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 23 TPEQVEALERVYAECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 78
>gi|213625179|gb|AAI69989.1| Mix.1 protein [Xenopus laevis]
gi|213626225|gb|AAI69993.1| Mix.1 protein [Xenopus laevis]
Length = 377
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
+P D + SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 84 SPTADASLVPASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 135
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 136 PESRIQVWFQNRRAKVRRQ 154
>gi|187611423|sp|Q7Y0V9.2|ROC4_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC4; AltName:
Full=GLABRA 2-like homeobox protein 4; AltName:
Full=HD-ZIP protein ROC4; AltName: Full=Homeodomain
transcription factor ROC4; AltName: Full=Protein RICE
OUTERMOST CELL-SPECIFIC 4
Length = 813
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ AEL+K + V WFQNRR ++K
Sbjct: 112 TPQQIQELEAMFKECPHPDEKQR-----AELSKRLGLEPRQVKFWFQNRRTQMK 160
>gi|116310008|emb|CAH67034.1| OSIGBa0139P06.7 [Oryza sativa Indica Group]
Length = 805
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ AEL+K + V WFQNRR ++K
Sbjct: 111 TPQQIQELEAMFKECPHPDEKQR-----AELSKRLGLEPRQVKFWFQNRRTQMK 159
>gi|115459990|ref|NP_001053595.1| Os04g0569100 [Oryza sativa Japonica Group]
gi|38344373|emb|CAD41424.2| OSJNBb0032E06.7 [Oryza sativa Japonica Group]
gi|113565166|dbj|BAF15509.1| Os04g0569100 [Oryza sativa Japonica Group]
Length = 806
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ AEL+K + V WFQNRR ++K
Sbjct: 112 TPQQIQELEAMFKECPHPDEKQR-----AELSKRLGLEPRQVKFWFQNRRTQMK 160
>gi|449505665|ref|XP_002189984.2| PREDICTED: hematopoietically-expressed homeobox protein HHEX
[Taeniopygia guttata]
Length = 337
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRK-QNPESIQSLE 116
LAK Q+SE V WFQNRRA+ +R + N ++ E V A+S Q PES QS E
Sbjct: 233 LAKMLQLSERQVKTWFQNRRAKWRRLKQ---ENPQATKKEEVEGADSHSDQRPESCQSPE 289
>gi|449433543|ref|XP_004134557.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
ATHB-9-like [Cucumis sativus]
Length = 847
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQS 85
TP Q++ LE VY EC P + Q + E I + WFQNRR R K RK+S
Sbjct: 23 TPEQVEALERVYAECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKES 80
>gi|133958048|ref|NP_508131.3| Protein PHA-2 [Caenorhabditis elegans]
gi|351061590|emb|CCD69443.1| Protein PHA-2 [Caenorhabditis elegans]
Length = 166
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 20/116 (17%)
Query: 7 YFDPFVASGSQKLTARQ-RWTPTPAQLQILEHVYDECKG-TPRKQKIQDMTAELAKHGQI 64
+ P+++ QK Q R+T Q LEH +D K +P+++K +LAK +
Sbjct: 64 WLYPYMSKSPQKRKGGQIRFTN--EQTDALEHKFDSHKYLSPQERK------KLAKSLSL 115
Query: 65 SETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
SE V WFQNRRA+ +R V + E E E A +R S+ L+ S P
Sbjct: 116 SERQVKTWFQNRRAKWRR-----VRKDGEDEDEMPNGASAR-----SLGQLQSSNP 161
>gi|72000974|ref|NP_001024212.1| Protein TTX-1, isoform a [Caenorhabditis elegans]
gi|21615502|emb|CAB60478.2| Protein TTX-1, isoform a [Caenorhabditis elegans]
Length = 391
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R+R T T QL+ILE + K + D M ++A Q+ E+ V WF+NRRA+
Sbjct: 201 RERTTFTRNQLEILESYF-------VKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 253
Query: 80 LKRKQSGVVPNNA 92
++++ + P+N+
Sbjct: 254 ARQQKKTLAPSNS 266
>gi|402881727|ref|XP_003904416.1| PREDICTED: homeobox protein HMX2 [Papio anubis]
Length = 273
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|148669873|gb|EDL01820.1| ventral anterior homeobox containing gene 1 [Mus musculus]
Length = 222
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 102 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 156
Query: 82 RKQ 84
+ Q
Sbjct: 157 KDQ 159
>gi|426366471|ref|XP_004050281.1| PREDICTED: homeobox protein HMX2 [Gorilla gorilla gorilla]
Length = 273
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|395842653|ref|XP_003794129.1| PREDICTED: homeobox protein HMX2 [Otolemur garnettii]
Length = 273
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|347970367|ref|XP_313453.5| AGAP003671-PA [Anopheles gambiae str. PEST]
gi|333468900|gb|EAA08821.5| AGAP003671-PA [Anopheles gambiae str. PEST]
Length = 485
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQ 84
+ELAK+ +++ET V WFQNRR + KRKQ
Sbjct: 269 SELAKNLRLTETQVKIWFQNRRYKTKRKQ 297
>gi|194746492|ref|XP_001955714.1| GF16103 [Drosophila ananassae]
gi|190628751|gb|EDV44275.1| GF16103 [Drosophila ananassae]
Length = 489
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK LA+ +SET V WFQNRR
Sbjct: 385 RIRTAFSPSQLLKLEHAFESNQYVVGAERK--------ALAQSLNLSETQVKVWFQNRRT 436
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 437 KHKRMQ 442
>gi|432920225|ref|XP_004079898.1| PREDICTED: ventral anterior homeobox 2-like [Oryzias latipes]
Length = 306
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 100 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 154
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPP 122
+ + + S +E++ + E + L APPP
Sbjct: 155 KDTTKDSDKRSSSTSESLATCNILRLL-EQGRLLSGPAPPP 194
>gi|351694611|gb|EHA97529.1| Homeobox protein HMX2 [Heterocephalus glaber]
Length = 273
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|70608170|ref|NP_005510.1| homeobox protein HMX2 [Homo sapiens]
gi|152032526|sp|A2RU54.1|HMX2_HUMAN RecName: Full=Homeobox protein HMX2; AltName: Full=Homeobox protein
H6 family member 2
gi|119569673|gb|EAW49288.1| homeobox (H6 family) 2 [Homo sapiens]
gi|124376338|gb|AAI32759.1| H6 family homeobox 2 [Homo sapiens]
gi|187952521|gb|AAI37140.1| H6 family homeobox 2 [Homo sapiens]
Length = 273
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|126273067|ref|XP_001368153.1| PREDICTED: ventral anterior homeobox 1-like [Monodelphis domestica]
Length = 326
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 101 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 155
Query: 82 RKQ 84
+ Q
Sbjct: 156 KDQ 158
>gi|109729930|tpg|DAA05779.1| TPA_inf: class III HD-Zip protein HDZ33 [Selaginella
moellendorffii]
Length = 812
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
T QL+ILE VY+EC P + Q + E I+ + WFQNRR R K+++
Sbjct: 11 TNEQLEILELVYNECP-KPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQRK 66
>gi|157106093|ref|XP_001649162.1| engrailed [Aedes aegypti]
gi|108868882|gb|EAT33107.1| AAEL014635-PA [Aedes aegypti]
Length = 507
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T AQLQ L++ ++E + K++ Q ++AEL ++E+ + WFQN+RA++K
Sbjct: 411 RPRTAFTTAQLQRLKNEFNENRYLTEKRR-QALSAEL----NLNESQIKIWFQNKRAKIK 465
Query: 82 RKQS 85
+ S
Sbjct: 466 KTSS 469
>gi|441599791|ref|XP_003255110.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein HMX2 [Nomascus
leucogenys]
Length = 273
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|326454548|gb|ADZ74209.1| homeodomain protein HoxA1a [Luciobrama macrocephalus]
Length = 287
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G Q T R +T QL LE + K R ++++ + A L Q++ET V WFQ
Sbjct: 203 GGQPNTVRTNFTT--KQLTELEKEFHFNKYLTRARRVEHIAAAL----QLNETQVKIWFQ 256
Query: 75 NRRAR-LKRKQSGVVP 89
NRR + KR++ G++P
Sbjct: 257 NRRMKQKKREKEGILP 272
>gi|324533481|gb|ADY49311.1| Paired mesoderm homeobox protein 2B [Ascaris suum]
Length = 146
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T TP QL+ LE + E P +D+ + ++E V WFQNRRA+ +
Sbjct: 35 RIRTTFTPGQLKELERAFLETH-YPDIYTREDIAMRI----DLTEARVQVWFQNRRAKFR 89
Query: 82 R-------KQSGVVPNNAESEAETVTHAESRKQN--PESIQSLEDSAP 120
+ K+ G V +ES T T A + +N +SI S+ D+ P
Sbjct: 90 KHEKLRKLKEEGSV-EGSESCNGTETTANPKHENDDGDSIGSMADTGP 136
>gi|212722080|ref|NP_001132562.1| uncharacterized protein LOC100194027 [Zea mays]
gi|195644626|gb|ACG41781.1| homeobox-leucine zipper protein HAT14 [Zea mays]
Length = 333
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+AR++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 162 SARKKLRLSKEQSAFLEDSFKEHATLNPKQKLA-----LAKQLNLRPRQVEVWFQNRRAR 216
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPES-IQSLEDSAP 120
K KQ+ V + ET+T R Q S ++SL+ P
Sbjct: 217 TKLKQTEVDCEYLKRCCETLTEENRRLQKELSELRSLKTVHP 258
>gi|57527993|ref|NP_001009577.1| homeobox transcription factor Nk1 [Strongylocentrotus purpuratus]
gi|42795449|gb|AAS46234.1| homeobox transcription factor Nk1 [Strongylocentrotus purpuratus]
Length = 432
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTH 101
LA ++ET V WFQNRR + K++ G+ PN + + T TH
Sbjct: 327 LALSLSLTETQVKIWFQNRRTKWKKQNPGMDPNAPTTTSVTATH 370
>gi|410976233|ref|XP_003994527.1| PREDICTED: homeobox protein HMX2 [Felis catus]
Length = 304
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAES 104
A LA Q++ET V WFQNRR + KR+ S AE EA + HA +
Sbjct: 211 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASA 253
>gi|302757763|ref|XP_002962305.1| hypothetical protein SELMODRAFT_77000 [Selaginella
moellendorffii]
gi|300170964|gb|EFJ37565.1| hypothetical protein SELMODRAFT_77000 [Selaginella
moellendorffii]
Length = 821
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
T QL+ILE VY+EC P + Q + E I+ + WFQNRR R K+++
Sbjct: 11 TNEQLEILELVYNECP-KPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQRK 66
>gi|357482123|ref|XP_003611347.1| Homeobox-leucine zipper protein HOX17 [Medicago truncatula]
gi|217072862|gb|ACJ84791.1| unknown [Medicago truncatula]
gi|355512682|gb|AES94305.1| Homeobox-leucine zipper protein HOX17 [Medicago truncatula]
Length = 296
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
T+R++ T Q ILE + E KQK+ LAK + V WFQNRRAR
Sbjct: 133 TSRKKLRLTKDQSIILEESFKEHNTLNPKQKLA-----LAKQLGLRARQVEVWFQNRRAR 187
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQ 107
K KQ+ V + E +T R Q
Sbjct: 188 TKLKQTEVDCEFLKRCCENLTDENRRLQ 215
>gi|195449567|ref|XP_002072128.1| GK22678 [Drosophila willistoni]
gi|194168213|gb|EDW83114.1| GK22678 [Drosophila willistoni]
Length = 476
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK LA+ +SET V WFQNRR
Sbjct: 373 RIRTAFSPSQLLKLEHAFESNQYVVGAERK--------ALAQSLNLSETQVKVWFQNRRT 424
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 425 KHKRMQ 430
>gi|33641772|gb|AAQ24371.1| BarX/Bsh [Halichondria bowerbanki]
Length = 253
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 9 DPFVASGSQKLTARQR-----WTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ 63
D F ASG L+ R+R T QL LE + + K ++ ELA +
Sbjct: 131 DHFDASGPHLLSHRRRKRKLRTVFTEKQLDGLESKFADKKYLSVPDRM-----ELANRLE 185
Query: 64 ISETNVYNWFQNRRARLKRKQ 84
+SET V WFQNRR + K++Q
Sbjct: 186 LSETQVKTWFQNRRMKCKKQQ 206
>gi|5502|emb|CAA44264.1| YOX 1 [Saccharomyces cerevisiae]
Length = 296
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
L R+R + +L IL+ +++C ++++I ELA+ ++E V WFQN+R
Sbjct: 175 LARRKRRRTSSQELSILQAEFEKCPAPSKEKRI-----ELAESCHMTEKAVQIWFQNKRQ 229
Query: 79 RLKRKQ 84
+KR++
Sbjct: 230 AVKRQR 235
>gi|70608207|ref|NP_666110.1| homeobox protein HMX2 [Mus musculus]
gi|27735196|sp|P43687.3|HMX2_MOUSE RecName: Full=Homeobox protein HMX2; AltName: Full=Homeobox protein
Nkx-5.2
gi|19483944|gb|AAH23402.1| Hmx2 protein [Mus musculus]
gi|74209721|dbj|BAE23589.1| unnamed protein product [Mus musculus]
gi|148685771|gb|EDL17718.1| H6 homeobox 2 [Mus musculus]
Length = 273
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|410901026|ref|XP_003963997.1| PREDICTED: homeobox protein HMX2-like [Takifugu rubripes]
gi|410930960|ref|XP_003978865.1| PREDICTED: homeobox protein HMX2-like [Takifugu rubripes]
Length = 273
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|212646604|ref|NP_001129914.1| Protein TTX-1, isoform c [Caenorhabditis elegans]
gi|198446798|emb|CAR64688.1| Protein TTX-1, isoform c [Caenorhabditis elegans]
Length = 354
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R+R T T QL+ILE + K + D M ++A Q+ E+ V WF+NRRA+
Sbjct: 164 RERTTFTRNQLEILESYF-------VKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 216
Query: 80 LKRKQSGVVPNNA 92
++++ + P+N+
Sbjct: 217 ARQQKKTLAPSNS 229
>gi|195055678|ref|XP_001994740.1| GH14408 [Drosophila grimshawi]
gi|193892503|gb|EDV91369.1| GH14408 [Drosophila grimshawi]
Length = 506
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK Q + +SET V WFQNRR
Sbjct: 402 RIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQSLN--------LSETQVKVWFQNRRT 453
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 454 KHKRMQ 459
>gi|121495687|emb|CAM12259.1| engrailed protein [Loligo vulgaris]
Length = 62
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
T QLQ L+ +D+C+ +++ +LA+ +SE + WFQN+RA++K K SGV
Sbjct: 1 TSDQLQRLKQEFDDCRYLTEERR-----KKLARELCLSEAQIKIWFQNKRAKIK-KSSGV 54
>gi|255541474|ref|XP_002511801.1| homeobox protein, putative [Ricinus communis]
gi|223548981|gb|EEF50470.1| homeobox protein, putative [Ricinus communis]
Length = 825
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 130 TPQQIQELEALFKECPHPDEKQRL-----ELSKRLCLETRQVKFWFQNRRTQMK 178
>gi|151942416|gb|EDN60772.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190404624|gb|EDV07891.1| homeobox protein YHP1 [Saccharomyces cerevisiae RM11-1a]
gi|207346260|gb|EDZ72808.1| YDR451Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273650|gb|EEU08577.1| Yhp1p [Saccharomyces cerevisiae JAY291]
Length = 353
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR-ARLKRKQSG 86
+L IL+ +DEC TP K K EL++ +SE +V WFQN+R A K K SG
Sbjct: 184 ELGILQTAFDEC-PTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHKNSG 235
>gi|323305360|gb|EGA59105.1| Yhp1p [Saccharomyces cerevisiae FostersB]
gi|323309566|gb|EGA62775.1| Yhp1p [Saccharomyces cerevisiae FostersO]
Length = 353
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR-ARLKRKQSG 86
+L IL+ +DEC TP K K EL++ +SE +V WFQN+R A K K SG
Sbjct: 184 ELGILQTAFDEC-PTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHKNSG 235
>gi|312379199|gb|EFR25555.1| hypothetical protein AND_09022 [Anopheles darlingi]
Length = 503
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQ 84
+ELAK+ +++ET V WFQNRR + KRKQ
Sbjct: 275 SELAKNLRLTETQVKIWFQNRRYKTKRKQ 303
>gi|297817426|ref|XP_002876596.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
lyrata]
gi|297322434|gb|EFH52855.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
lyrata]
Length = 811
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ +L++ + V WFQNRR ++K
Sbjct: 121 TPKQIQDLESVFKECAHPDEKQRL-----DLSRRLNLDPRQVKFWFQNRRTQMK 169
>gi|195329134|ref|XP_002031266.1| GM24141 [Drosophila sechellia]
gi|194120209|gb|EDW42252.1| GM24141 [Drosophila sechellia]
Length = 513
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 22 RQRWTPTPAQLQILEHVYDECK---GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
R R +P+QL LEH ++ + G RK LA++ +SET V WFQNRR
Sbjct: 409 RIRTAFSPSQLLKLEHAFESNQYVVGAERK--------ALAQNLNLSETQVKVWFQNRRT 460
Query: 79 RLKRKQ 84
+ KR Q
Sbjct: 461 KHKRMQ 466
>gi|431908251|gb|ELK11851.1| Mitotic checkpoint protein BUB3 [Pteropus alecto]
Length = 626
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|841336|gb|AAA91309.1| engrailed homolog, similar to Drosophila engrailed homeotic
protein, Swiss_Prot Accession Number P02836; Method:
conceptual translation supplied by author, partial
[Nautilus pompilius]
Length = 76
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
T QLQ L+ ++EC+ +D +LA+ +SE + WFQN+RA++K+
Sbjct: 8 TSDQLQYLKKEFEECRYLT-----EDRRRKLARELSLSEAQIKIWFQNKRAKMKK 57
>gi|410976177|ref|XP_003994500.1| PREDICTED: ventral anterior homeobox 1 [Felis catus]
Length = 327
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 79 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 133
Query: 82 RKQ 84
+ Q
Sbjct: 134 KDQ 136
>gi|148234358|ref|NP_001079317.1| ventral anterior homeobox 1b [Xenopus laevis]
gi|82246968|sp|Q9DDB0.1|VAX1B_XENLA RecName: Full=Ventral anterior homeobox 1b
gi|11990263|emb|CAC19632.1| Vax1b protein [Xenopus laevis]
Length = 287
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 91 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 145
Query: 82 RKQ 84
+ Q
Sbjct: 146 KDQ 148
>gi|398366607|ref|NP_010739.3| Yhp1p [Saccharomyces cerevisiae S288c]
gi|73921276|sp|Q04116.1|YHP1_YEAST RecName: Full=Homeobox protein YHP1
gi|927707|gb|AAB64873.1| Ydr451cp [Saccharomyces cerevisiae]
gi|285811462|tpg|DAA12286.1| TPA: Yhp1p [Saccharomyces cerevisiae S288c]
gi|392300568|gb|EIW11659.1| Yhp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 353
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR-ARLKRKQSG 86
+L IL+ +DEC TP K K EL++ +SE +V WFQN+R A K K SG
Sbjct: 184 ELGILQTAFDEC-PTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHKNSG 235
>gi|224092274|ref|XP_002309538.1| predicted protein [Populus trichocarpa]
gi|60327635|gb|AAX19057.1| class III HD-Zip protein 8 [Populus trichocarpa]
gi|222855514|gb|EEE93061.1| predicted protein [Populus trichocarpa]
Length = 828
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE +Y EC P + Q + E I + WFQNRR R K+++
Sbjct: 10 TPEQVEALERLYHECP-KPSSMRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRK 65
>gi|410976183|ref|XP_003994502.1| PREDICTED: homeobox protein EMX2 [Felis catus]
Length = 183
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Query: 28 TPAQLQILEHVYDE---CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
+P+QL LEH +++ G RKQ LA ++ET V WFQNRR + KR++
Sbjct: 93 SPSQLLRLEHAFEKNHYVVGAERKQ--------LAHSLSLTETQVKVWFQNRRTKFKRQK 144
>gi|351701432|gb|EHB04351.1| Ventral anterior homeobox 2 [Heterocephalus glaber]
Length = 214
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ ++ ELA+ +SET V WFQNRR + K
Sbjct: 26 RTRTSFTAEQLYRLEMEFQHCQYVVGHER-----TELARQLNLSETQVKVWFQNRRTKQK 80
Query: 82 RKQS 85
+ QS
Sbjct: 81 KDQS 84
>gi|349577495|dbj|GAA22664.1| K7_Yhp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 353
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR-ARLKRKQSG 86
+L IL+ +DEC TP K K EL++ +SE +V WFQN+R A K K SG
Sbjct: 184 ELGILQTAFDEC-PTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHKNSG 235
>gi|323355461|gb|EGA87283.1| Yhp1p [Saccharomyces cerevisiae VL3]
Length = 353
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 31 QLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR-ARLKRKQSG 86
+L IL+ +DEC TP K K EL++ +SE +V WFQN+R A K K SG
Sbjct: 184 ELGILQTAFDEC-PTPNKAK----RIELSEQCNMSEKSVQIWFQNKRQAAKKHKNSG 235
>gi|168015694|ref|XP_001760385.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015850|ref|XP_001760463.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688399|gb|EDQ74776.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688477|gb|EDQ74854.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
TAR++ + Q +LE + E KQK LAK + V WFQNRRAR
Sbjct: 14 TARKKLRLSKEQSALLEESFKEHSTLNPKQK-----NALAKQLGLRPRQVEVWFQNRRAR 68
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAPPPRDEDIY 128
K KQ+ V + ET+T R Q + +++++ + P D Y
Sbjct: 69 TKLKQTEVDCELLKRCVETLTEENRRLQKELQELRAIKVAPPCVISHDFY 118
>gi|115647030|ref|XP_781057.2| PREDICTED: uncharacterized protein LOC575572 [Strongylocentrotus
purpuratus]
Length = 446
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
GS + R R T T QL LE +D + M ELA +SE+ V WFQ
Sbjct: 193 GSCRKLRRSRTTFTTFQLHQLERAFDMTQ-----YPDVFMREELALRLDLSESRVQVWFQ 247
Query: 75 NRRARLKRKQ 84
NRRA+ ++K+
Sbjct: 248 NRRAKWRKKE 257
>gi|449437902|ref|XP_004136729.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Cucumis
sativus]
Length = 384
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R++ + Q LE + E KQK+ LAK + V WFQNRRAR K
Sbjct: 233 RKKLRLSKLQSAFLEESFKEHTTLNPKQKLA-----LAKQLNLRPRQVEVWFQNRRARTK 287
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAP 120
KQ+ V ET+T R Q + +++L+ S P
Sbjct: 288 LKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQP 327
>gi|109131769|ref|XP_001092145.1| PREDICTED: homeobox protein ESX1 [Macaca mulatta]
gi|355705037|gb|EHH30962.1| hypothetical protein EGK_20785 [Macaca mulatta]
Length = 361
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAE--LAKHGQISETNVYNWFQNRRAR 79
R+R T QLQ LE+ +DE + D+ A LA ++E V WFQNRRA+
Sbjct: 141 RRRTAFTQFQLQELENFFDEAQ-------YPDVVARERLAARLNLTEDRVQVWFQNRRAK 193
Query: 80 LKRKQSGVVPNN 91
KR Q ++ N
Sbjct: 194 WKRNQRVLMLRN 205
>gi|15987509|gb|AAL12001.1| homeodomain protein TTX-1 [Caenorhabditis elegans]
Length = 372
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R+R T T QL+ILE + K + D M ++A Q+ E+ V WF+NRRA+
Sbjct: 182 RERTTFTRNQLEILESYF-------VKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 234
Query: 80 LKRKQSGVVPNNA 92
++++ + P+N+
Sbjct: 235 ARQQKKTLAPSNS 247
>gi|444730628|gb|ELW71005.1| Shootin-1 [Tupaia chinensis]
Length = 898
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 65 RTRTSFTAEQLYRLEMEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 119
Query: 82 RKQ 84
+ Q
Sbjct: 120 KDQ 122
>gi|403259332|ref|XP_003922171.1| PREDICTED: homeobox protein HMX2 [Saimiri boliviensis boliviensis]
Length = 273
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|302763605|ref|XP_002965224.1| hypothetical protein SELMODRAFT_167294 [Selaginella
moellendorffii]
gi|300167457|gb|EFJ34062.1| hypothetical protein SELMODRAFT_167294 [Selaginella
moellendorffii]
Length = 778
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
T QL+ILE VY+EC P + Q + E I+ + WFQNRR R K+++
Sbjct: 11 TNEQLEILELVYNECP-KPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQRK 66
>gi|297739823|emb|CBI30005.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ R++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 91 STRKKLRLSKEQSAFLEESFKEHNTLNPKQKL-----ALAKQLNLRPRQVEVWFQNRRAR 145
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAP 120
K KQ+ V + ET+T R Q + +++L+ S P
Sbjct: 146 TKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQP 187
>gi|391335219|ref|XP_003741993.1| PREDICTED: homeobox protein DLX-1-like [Metaseiulus occidentalis]
Length = 248
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 4 GNPYFDPFVASGSQK-LTARQRWTP-TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
GNP+ + + ++ T R+ TP T QL LE + +I E+AK
Sbjct: 147 GNPFTETSIRPNLRRQRTDRKPRTPFTTVQLATLERRFHSKHYLSNSDRI-----EIAKD 201
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVPN 90
++ET V WFQNRRA+ KR Q PN
Sbjct: 202 LGLTETQVKIWFQNRRAKEKRIQEANSPN 230
>gi|327291322|ref|XP_003230370.1| PREDICTED: ventral anterior homeobox 2a-like, partial [Anolis
carolinensis]
Length = 213
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 21 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 75
Query: 82 RKQS 85
+ QS
Sbjct: 76 KDQS 79
>gi|327267724|ref|XP_003218649.1| PREDICTED: homeobox protein HMX2-like [Anolis carolinensis]
Length = 293
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAES 104
A LA Q++ET V WFQNRR + KR+ S AE EA + HA +
Sbjct: 198 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASA 240
>gi|326490099|dbj|BAJ94123.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ+ EL+K + V WFQNRR ++K
Sbjct: 102 TPQQIQELEALFKECPHPDEKQR-----GELSKRLSLDARQVKFWFQNRRTQMK 150
>gi|15233048|ref|NP_191674.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
gi|75335834|sp|Q9M2E8.1|HDG1_ARATH RecName: Full=Homeobox-leucine zipper protein HDG1; AltName:
Full=HD-ZIP protein HDG1; AltName: Full=Homeodomain
GLABRA 2-like protein 1; AltName: Full=Homeodomain
transcription factor HDG1; AltName: Full=Protein
HOMEODOMAIN GLABROUS 1
gi|6850882|emb|CAB71045.1| homeobox protein [Arabidopsis thaliana]
gi|15292865|gb|AAK92803.1| putative homeobox protein [Arabidopsis thaliana]
gi|20465805|gb|AAM20391.1| putative homeobox protein [Arabidopsis thaliana]
gi|332646640|gb|AEE80161.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
Length = 808
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ +L++ + V WFQNRR ++K
Sbjct: 118 TPKQIQDLESVFKECAHPDEKQRL-----DLSRRLNLDPRQVKFWFQNRRTQMK 166
>gi|296223598|ref|XP_002807578.1| PREDICTED: LOW QUALITY PROTEIN: ventral anterior homeobox 2
[Callithrix jacchus]
Length = 286
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 100 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 154
Query: 82 RKQS 85
QS
Sbjct: 155 XDQS 158
>gi|5050910|emb|CAB45018.1| homeodomain GLABRA2 like 1 protein [Arabidopsis thaliana]
Length = 808
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE V+ EC KQ++ +L++ + V WFQNRR ++K
Sbjct: 118 TPKQIQDLESVFKECAHPDEKQRL-----DLSRRLNLDPRQVKFWFQNRRTQMK 166
>gi|1814424|gb|AAB41901.1| homeodomain protein AHDP [Arabidopsis thaliana]
Length = 745
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 102 TPQQIQELESMFKECPHPDEKQRL-----ELSKRLCLETRQVKFWFQNRRTQMK 150
>gi|350403347|ref|XP_003486774.1| PREDICTED: homeobox protein MSX-1-like [Bombus impatiens]
Length = 331
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T AQ++ LE ++ K +++Q L+K +++ET + WFQNRR + K
Sbjct: 174 RPRTAFTAAQIKSLEAEFERNKYLSVAKRLQ-----LSKSLKLTETQIKIWFQNRRTKWK 228
Query: 82 RKQSGVV 88
RK + V
Sbjct: 229 RKYTNDV 235
>gi|193209621|ref|NP_508524.2| Protein CEH-30 [Caenorhabditis elegans]
gi|218512072|sp|Q22909.2|HM30_CAEEL RecName: Full=Homeobox protein ceh-30
gi|373254122|emb|CCD66474.1| Protein CEH-30 [Caenorhabditis elegans]
Length = 237
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
RMG+P GS K + + R T QLQ LE+ +++ K +QD +LA
Sbjct: 85 RMGSP--------GSCKKSRKARTIFTDKQLQELENTFEKQKYL----SVQD-RMDLAHR 131
Query: 62 GQISETNVYNWFQNRRARLKRKQSG 86
+++T V W+QNRR + KR+ +
Sbjct: 132 MGLTDTQVKTWYQNRRTKWKRQATS 156
>gi|190338659|gb|AAI62601.1| Hematopoietically expressed homeobox [Danio rerio]
Length = 228
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAE 97
LAK Q+SE V WFQNRRA+ +R + P+ + EAE
Sbjct: 150 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPPSTGKREAE 189
>gi|356498410|ref|XP_003518045.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
Length = 329
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ R++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 167 STRKKLRLSKEQSAFLEESFKEHTTLNPKQKL-----ALAKQLNLRPRQVEVWFQNRRAR 221
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAP 120
K KQ+ V + ET+T R Q + +++L+ S P
Sbjct: 222 TKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQP 263
>gi|302190096|dbj|BAJ14107.1| PHABULOSA [Juncus prismatocarpus subsp. leschenaultii]
Length = 857
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE VY+EC P K Q + E I + WFQNRR R K+++
Sbjct: 17 TPEQVEALERVYNECP-KPSSLKRQQLIRENPLLVNIEPKQIKVWFQNRRCREKQRK 72
>gi|357507075|ref|XP_003623826.1| Homeodomain protein (HB2) [Medicago truncatula]
gi|355498841|gb|AES80044.1| Homeodomain protein (HB2) [Medicago truncatula]
Length = 778
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 99 TPQQIQELESMFKECPHPDEKQRL-----ELSKRLCLETRQVKFWFQNRRTQMK 147
>gi|3171739|emb|CAA06728.1| homeodomain leucine zipper protein [Craterostigma plantagineum]
Length = 292
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
R++ T AQ +LE + KQK QD+ EL ++ V WFQNRRAR
Sbjct: 146 GRKKLRLTKAQSALLEESFKHHSTLNPKQK-QDLAREL----KLRPRQVEVWFQNRRART 200
Query: 81 KRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLE 116
K KQ+ V + ET+T E+RK E +Q L+
Sbjct: 201 KLKQTEVDYALLKKCCETLTE-ENRKLQKE-VQELK 234
>gi|443726371|gb|ELU13551.1| hypothetical protein CAPTEDRAFT_165954 [Capitella teleta]
Length = 329
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R+R T + AQL +LE ++ G R I M E+A + E+ V WF+NRRA+ +
Sbjct: 71 RERTTFSRAQLDVLESLF----GKTRYPDI-FMREEVALKINLPESRVQVWFKNRRAKCR 125
Query: 82 RKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSP 132
++Q N +S T + A+ +P + +P D P +P
Sbjct: 126 QQQKAAEQAN-KSGGSTGSSAKDSAASPGGATVKKSKSPGLSDGSASPPAP 175
>gi|357509981|ref|XP_003625279.1| Homeobox-leucine zipper protein HOX27 [Medicago truncatula]
gi|355500294|gb|AES81497.1| Homeobox-leucine zipper protein HOX27 [Medicago truncatula]
Length = 296
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ R++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 157 STRKKLRLSKEQSAFLEDSFKEHTTLNPKQKLA-----LAKQLNLRPRQVEVWFQNRRAR 211
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAP 120
K KQ+ V + ET+T R Q + +++L+ S P
Sbjct: 212 TKSKQTEVDCEYLKRCCETLTEENKRLQKELQELRALKTSQP 253
>gi|326526073|dbj|BAJ93213.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 840
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQS 85
TP Q++ LE VY EC P + Q + E I + WFQNRR R K RK+S
Sbjct: 37 TPEQVEALERVYAECP-KPTSTRRQQLLRECPILSNIEPRQIKVWFQNRRCRDKQRKES 94
>gi|148236105|ref|NP_001079169.1| homeobox protein koza [Xenopus laevis]
gi|82248853|sp|Q9W7E8.1|KOZA_XENLA RecName: Full=Homeobox protein koza; AltName: Full=Homeodomain
transcription factor koza
gi|5059067|gb|AAD38901.1|AF127225_1 homeodomain transcription factor koza [Xenopus laevis]
Length = 213
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN 108
A+LAK +++ET V WFQNRR + KRKQ + + E E + A+ R N
Sbjct: 133 AQLAKSLKLTETQVKIWFQNRRYKTKRKQ--LATDMEEVEKSSAHPAQCRDTN 183
>gi|302142141|emb|CBI19344.3| unnamed protein product [Vitis vinifera]
Length = 298
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 21 ARQRWTPTPAQLQILEHVYDE-CKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+R++ T Q ILE + + PR++++ LAK + V WFQNRRAR
Sbjct: 125 SRKKLRLTKEQAVILEDSFKQHSTLNPRQKQV------LAKQLNLRPRQVEVWFQNRRAR 178
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAPPPRDEDIYPQSP 132
K KQ+ V ET+T R Q + +++L+ + P +Y Q P
Sbjct: 179 TKLKQTEVDCELLRKRCETLTDENQRLQKELQELKALKLATP------LYMQLP 226
>gi|312282957|dbj|BAJ34344.1| unnamed protein product [Thellungiella halophila]
Length = 844
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQSG 86
TP Q++ LE VY EC P + Q + E I + WFQNRR R K RK+S
Sbjct: 29 TPEQVEALERVYAECP-KPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESA 87
>gi|303388753|ref|XP_003072610.1| Homeodomain-containing transcription factor-like protein
[Encephalitozoon intestinalis ATCC 50506]
gi|303301751|gb|ADM11250.1| Homeodomain-containing transcription factor-like protein
[Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 25/145 (17%)
Query: 4 GNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ 63
G+ YFDP+ + R T AQL++LE + E P + + EL
Sbjct: 22 GSQYFDPYFV--------KHRKRTTKAQLKVLEETF-ETNIRPDANMRKKLGEELG---- 68
Query: 64 ISETNVYNWFQNRRARLKR-------KQSGVVPNNAESEAETVTHAESRKQNPES----I 112
++ +V WFQNRRA++K+ +Q + A T + ++ K N I
Sbjct: 69 MTPRSVQVWFQNRRAKIKKLTQKKMMQQENTDNTKGQETAHTPSPSKESKYNGYHPYMPI 128
Query: 113 QS-LEDSAPPPRDEDIYPQSPDLGI 136
Q LE+ PRD IY + G+
Sbjct: 129 QGPLEEFNVYPRDNSIYKHAIPQGM 153
>gi|338720332|ref|XP_001499709.3| PREDICTED: paired mesoderm homeobox protein 2-like [Equus caballus]
Length = 297
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 30 AQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRARLKRKQSGV 87
+QLQ LE V++ + D + ELA+ +SE V WFQNRRA+ +R + +
Sbjct: 158 SQLQALERVFE-------RTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 210
Query: 88 VPNNAES 94
+ + + S
Sbjct: 211 LASRSAS 217
>gi|5702094|gb|AAD47139.1|AF077335_1 Anthocyaninless2 [Arabidopsis thaliana]
Length = 801
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 142 TPQQIQELESMFKECPHPDEKQRL-----ELSKRLCLETRQVKFWFQNRRTQMK 190
>gi|18858811|ref|NP_571009.1| hematopoietically-expressed homeobox protein hhex [Danio rerio]
gi|82247679|sp|Q9IAV3.1|HHEX_DANRE RecName: Full=Hematopoietically-expressed homeobox protein hhex;
Short=Homeobox protein hex
gi|6782423|gb|AAF28383.1| hematopoietically expressed homeobox protein Hhex [Danio rerio]
Length = 228
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 58 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAE 97
LAK Q+SE V WFQNRRA+ +R + P+ + EAE
Sbjct: 150 LAKMLQLSERQVKTWFQNRRAKWRRLKQENPPSTGKREAE 189
>gi|383930759|gb|AFH56718.1| class III HD-Zip protein 8 [Prunus persica]
Length = 840
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE +Y EC P + Q + E I + WFQNRR R K+++
Sbjct: 26 TPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 81
>gi|363735608|ref|XP_001231298.2| PREDICTED: homeobox protein HMX2 [Gallus gallus]
Length = 273
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 56 AELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 105
A LA Q++ET V WFQNRR + KR+ S AE EA + HA ++
Sbjct: 180 ACLASSLQLTETQVKTWFQNRRNKWKRQLS------AELEAANMAHASAQ 223
>gi|356530687|ref|XP_003533912.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
Length = 327
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ R++ + Q LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 162 STRKKLRLSKEQSAFLEESFKEHTTLNPKQKL-----ALAKQLNLRPRQVEVWFQNRRAR 216
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAP 120
K KQ+ V + ET+T R Q + +++L+ S P
Sbjct: 217 TKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSSQP 258
>gi|302398629|gb|ADL36609.1| BZIP domain class transcription factor [Malus x domestica]
Length = 841
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q++ LE +Y EC P + Q + E I + WFQNRR R K+++
Sbjct: 25 TPEQVEALERLYHECP-KPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 80
>gi|197311332|gb|ACH61897.1| zerknuellt 3 [Episyrphus balteatus]
Length = 349
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T QL+ LE + C R ++ +E+A+H ++E V WFQNRR +K
Sbjct: 52 RMRTAFTNTQLEELEREFQHCFFLHRTRR-----SEIAQHLGLNEAQVKVWFQNRR--MK 104
Query: 82 RKQSGVVPNNAE 93
K+S + N E
Sbjct: 105 MKKSSITGNGNE 116
>gi|72000976|ref|NP_001024213.1| Protein TTX-1, isoform b [Caenorhabditis elegans]
gi|21615503|emb|CAB60479.2| Protein TTX-1, isoform b [Caenorhabditis elegans]
Length = 338
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R+R T T QL+ILE + K + D M ++A Q+ E+ V WF+NRRA+
Sbjct: 148 RERTTFTRNQLEILESYF-------VKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 200
Query: 80 LKRKQSGVVPNNA 92
++++ + P+N+
Sbjct: 201 ARQQKKTLAPSNS 213
>gi|15987507|gb|AAL12000.1| homeodomain protein TTX-1 [Caenorhabditis elegans]
Length = 332
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R+R T T QL+ILE + K + D M ++A Q+ E+ V WF+NRRA+
Sbjct: 142 RERTTFTRNQLEILESYF-------VKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 194
Query: 80 LKRKQSGVVPNNA 92
++++ + P+N+
Sbjct: 195 ARQQKKTLAPSNS 207
>gi|1764092|gb|AAB39864.1| paired-like homeodomain protein PRX2 [Homo sapiens]
Length = 164
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
R T +QLQ LE V++ + ELA+ +SE V WFQNRRA+ +R
Sbjct: 19 RTTFNSSQLQALERVFERTH-----YPDAFVREELARRVNLSEARVQVWFQNRRAKFRRN 73
Query: 84 QSGVVPNNAES 94
+ ++ + + S
Sbjct: 74 ERAMLASRSAS 84
>gi|6634772|gb|AAF19752.1|AC009917_11 Strong similarity to gb|Y10922 HD-Zip protein from Arabidopsis
thaliana, containing START PF|01852, bZIP transcription
factor PF|00170, and homeobox PF|00046 domains. ESTs
gb|F20019, gb|Z46707, gb|Z46706, gb|F20018 come from
this gene [Arabidopsis thaliana]
Length = 840
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQSG 86
TP Q++ LE VY EC P + Q + E I + WFQNRR R K RK+S
Sbjct: 25 TPEQVEALERVYAECP-KPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESA 83
>gi|30678721|ref|NP_567183.2| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
thaliana]
gi|122223902|sp|Q0WV12.1|ANL2_ARATH RecName: Full=Homeobox-leucine zipper protein ANTHOCYANINLESS 2;
AltName: Full=HD-ZIP protein ANL2; AltName:
Full=Homeodomain protein AHDP; AltName: Full=Homeodomain
transcription factor ANL2
gi|110742219|dbj|BAE99036.1| homeodomain protein AHDP [Arabidopsis thaliana]
gi|332656526|gb|AEE81926.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
thaliana]
Length = 802
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ++ EL+K + V WFQNRR ++K
Sbjct: 142 TPQQIQELESMFKECPHPDEKQRL-----ELSKRLCLETRQVKFWFQNRRTQMK 190
>gi|268576573|ref|XP_002643266.1| C. briggsae CBR-PHA-2 protein [Caenorhabditis briggsae]
Length = 220
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 28 TPAQLQILEHVYDECKG-TPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSG 86
T Q LEH +D K +P+++K +LAK +SE V WFQNRRA+ +R
Sbjct: 139 TNEQTDALEHKFDSHKYLSPQERK------KLAKSLSLSERQVKTWFQNRRAKWRR---- 188
Query: 87 VVPNNAESEAETVTHAESRKQNPESIQSLEDSAP 120
V + E E E A +R S+ L+ S P
Sbjct: 189 -VRKDGEDEDEMPNGASAR-----SLGQLQSSNP 216
>gi|414869821|tpg|DAA48378.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
protein [Zea mays]
Length = 293
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+AR++ + Q LE + E KQK A LAK + V WFQNRRAR
Sbjct: 107 SARKKLRLSKEQSAFLEESFKEHSTLNPKQK-----AALAKQLNLRPRQVEVWFQNRRAR 161
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNPE--SIQSLEDSAPP 121
K KQ+ V + ET+T E+R+ + E +++L+ +APP
Sbjct: 162 TKLKQTEVDCEYLKRCCETLTE-ENRRLHKELAELRALK-TAPP 203
>gi|356568318|ref|XP_003552359.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
[Glycine max]
Length = 822
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
TP Q+Q LE ++ EC KQ++ EL++ + V WFQNRR ++K
Sbjct: 132 TPQQIQELESLFKECPHPDEKQRL-----ELSRRLNLETRQVKFWFQNRRTQMK 180
>gi|84619805|gb|ABC59249.1| engrailed [Harmonia axyridis]
Length = 95
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + AQLQ L+H ++E + +++ Q ++AEL ++E + WFQN+RA++K
Sbjct: 28 RPRTAFSSAQLQRLKHEFNENRYLTERRR-QQLSAELG----LNEAQIKIWFQNKRAKIK 82
Query: 82 RKQSGVVP 89
+ S P
Sbjct: 83 KSSSEKNP 90
>gi|345780839|ref|XP_003432043.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Canis lupus familiaris]
Length = 378
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQD--MTAELAKHGQISETNVYNWFQNRRAR 79
R R T QL+ LE + +K D M LA + E V WF+NRRA+
Sbjct: 73 RSRTAFTAQQLEALEKTF-------QKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 125
Query: 80 LKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPP 121
++KQ + + + E +H ES+ + P LE PP
Sbjct: 126 FRKKQRSLQKEQLQKQKEAEGSHGESKPEAPTPDTQLETEQPP 168
>gi|358253845|dbj|GAA53847.1| homeobox protein SMOX-5 [Clonorchis sinensis]
Length = 537
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 22 RQRWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 80
+ R T + +QL LEH ++ K TP + +AK +S T V WFQNRRA+L
Sbjct: 337 KTRTTFSNSQLTELEHNFNRQKYLTPTDRD------RIAKTLGLSNTQVITWFQNRRAKL 390
Query: 81 KRK 83
KR+
Sbjct: 391 KRE 393
>gi|297851492|ref|XP_002893627.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
lyrata]
gi|297339469|gb|EFH69886.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
lyrata]
Length = 840
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK-RKQSG 86
TP Q++ LE VY EC P + Q + E I + WFQNRR R K RK+S
Sbjct: 25 TPEQVEALERVYAECP-KPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESA 83
>gi|391332001|ref|XP_003740427.1| PREDICTED: uncharacterized protein LOC100907929 [Metaseiulus
occidentalis]
Length = 513
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R T +P QL++LE +++ D LA +SE V WF NRRA+ +
Sbjct: 355 RNRTTFSPEQLEVLEEEFEKTH-----YPCVDTRERLASKTGLSEARVQVWFSNRRAKWR 409
Query: 82 RKQ 84
R Q
Sbjct: 410 RHQ 412
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,723,338,253
Number of Sequences: 23463169
Number of extensions: 105644004
Number of successful extensions: 288022
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 2967
Number of HSP's that attempted gapping in prelim test: 286389
Number of HSP's gapped (non-prelim): 3887
length of query: 162
length of database: 8,064,228,071
effective HSP length: 123
effective length of query: 39
effective length of database: 9,473,225,580
effective search space: 369455797620
effective search space used: 369455797620
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)