BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031304
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81788|WOX13_ARATH WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2
SV=1
Length = 268
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 109/194 (56%), Gaps = 35/194 (18%)
Query: 2 RMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
RMG Y DP ++S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+D+T EL++H
Sbjct: 77 RMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQH 136
Query: 62 GQISETNVYNWFQNRRARLKRKQ-------SGVVPNNAESEAETVTHAESRKQNPESIQS 114
GQI+E NVYNWFQNRRAR KRKQ + + E+E E + E R PES+
Sbjct: 137 GQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALN--EKRVVRPESLLG 194
Query: 115 LEDS-------------APPPRDEDIYPQSPDLGID-------------QMIGKMEIPGS 148
L D PR ED+ QSP++ D ++GKM + S
Sbjct: 195 LPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDVLSNPRDEHLVGKMGLAES 254
Query: 149 FSFHWQVDRYDMLG 162
++ + V+ Y M G
Sbjct: 255 YNLYDHVEDYGMSG 268
>sp|Q5QMM3|WOX8_ORYSJ WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8
PE=2 SV=1
Length = 267
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAK 60
MR+GN Y DP + G K+TARQRWTPTP QLQILE+++D+ GTP KQKI+D+TAEL++
Sbjct: 69 MRLGNLYCDPLMVPGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQ 128
Query: 61 HGQISETNVYNWFQNRRARLKRKQSGVVPNN 91
HGQISETNVYNWFQNRRAR KRKQ+ +PNN
Sbjct: 129 HGQISETNVYNWFQNRRARSKRKQAA-LPNN 158
>sp|Q9LM84|WOX14_ARATH WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2
SV=1
Length = 211
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 88/144 (61%), Gaps = 11/144 (7%)
Query: 3 MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
M YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ EL++H
Sbjct: 73 MVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEH 132
Query: 62 GQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPP 121
GQI+ETNVYNWFQNRRAR KRKQ N +++ VT E R S DS
Sbjct: 133 GQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGL 184
Query: 122 PRDEDIYPQSPDLGIDQM--IGKM 143
E I SPDLGI+ + IGK
Sbjct: 185 ESYEHILFPSPDLGIEHLLSIGKF 208
>sp|Q9LM83|WOX10_ARATH Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana
GN=WOX10 PE=3 SV=1
Length = 197
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 12/144 (8%)
Query: 3 MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKH 61
M YFDP VAS S ++ R RWTPT QLQILE++Y E GTP ++I+++T EL++H
Sbjct: 57 MRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEH 116
Query: 62 GQISETNVYNWFQNRRARLKRKQ---SGVVPNNAESEAETVTHAESRKQNPESIQSLEDS 118
GQI E NVY+WFQNRRAR KRKQ + + + A+ A T T R +DS
Sbjct: 117 GQIMEKNVYHWFQNRRARSKRKQPPTTTITSSQADDAAVTTTEERGR--------CGDDS 168
Query: 119 APPPRDEDIYPQSPDLGIDQMIGK 142
E I SPDLGI+ ++ +
Sbjct: 169 GGFESYEHILFPSPDLGIEHLLNR 192
>sp|Q9SIB4|WOX3_ARATH WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana GN=WOX3 PE=2
SV=1
Length = 244
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63
Query: 80 LKRK 83
++K
Sbjct: 64 DRQK 67
>sp|Q6X7K0|WOX1_ARATH WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2
SV=2
Length = 350
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 84 Q 84
+
Sbjct: 136 R 136
>sp|Q6X7J5|WOX8_ARATH WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2
SV=1
Length = 325
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
+ RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 82 RK 83
K
Sbjct: 113 HK 114
>sp|Q5W7C3|WOX2_ORYSJ Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp.
japonica GN=WOX2 PE=3 SV=1
Length = 286
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
>sp|A2XZR3|WOX2_ORYSI Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica
GN=WOX2 PE=3 SV=1
Length = 286
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
>sp|Q6X7J4|WOX9_ARATH WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2
SV=1
Length = 378
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 55 RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
>sp|Q6X7J9|WOX4_ARATH WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2
SV=1
Length = 251
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 149
Query: 84 Q 84
Q
Sbjct: 150 Q 150
>sp|Q6X7K1|WOX2_ARATH WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana GN=WOX2 PE=2
SV=1
Length = 260
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+ +LE++Y E TP +IQ +T L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 84 Q 84
Q
Sbjct: 74 Q 74
>sp|Q6S3I3|WOX3B_MAIZE WUSCHEL-related homeobox 3B OS=Zea mays GN=WOX3B PE=2 SV=1
Length = 265
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q70UV1|WOX3A_MAIZE WUSCHEL-related homeobox 3A OS=Zea mays GN=WOX3A PE=2 SV=1
Length = 262
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q0JKK6|WOX7_ORYSJ WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7
PE=2 SV=2
Length = 533
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 9 DPFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
PF + G +++ + RW P P Q++ILE +++ P + +I + +L ++GQ+ +
Sbjct: 53 SPFSSVGEERVPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDA 112
Query: 68 NVYNWFQNRRARLKRK 83
NV+ WFQNR++R K K
Sbjct: 113 NVFYWFQNRKSRSKNK 128
>sp|Q8LR86|WOX5_ORYSJ WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica
GN=WOX5 PE=2 SV=1
Length = 313
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +A
Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>sp|A2WWU7|WOX5_ORYSI WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5
PE=3 SV=1
Length = 313
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +A
Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>sp|Q33DK1|WOX3_ORYSJ WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. japonica
GN=WOX3 PE=1 SV=1
Length = 203
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|A2ZH47|WOX3_ORYSI WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. indica GN=WOX3
PE=3 SV=1
Length = 203
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 77
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|A3B6V0|WOX12_ORYSJ WUSCHEL-related homeobox 12 OS=Oryza sativa subsp. japonica
GN=WOX12 PE=2 SV=2
Length = 515
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 74
G++ + RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+ WFQ
Sbjct: 63 GTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQ 122
Query: 75 NRRARLKRK 83
NR++R K K
Sbjct: 123 NRKSRTKNK 131
>sp|Q7XTV3|WOX4_ORYSJ WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica GN=WOX4
PE=2 SV=2
Length = 236
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+ Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 84 Q 84
Q
Sbjct: 152 Q 152
>sp|Q25AM2|WOX4_ORYSI WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica GN=WOX4
PE=3 SV=1
Length = 236
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW P+ Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 84 Q 84
Q
Sbjct: 152 Q 152
>sp|Q6YBV1|WUS_ANTMA Protein WUSCHEL OS=Antirrhinum majus GN=WUS PE=2 SV=1
Length = 281
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 13 ASGSQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETN 68
SG RQ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I N
Sbjct: 26 GSGGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKN 85
Query: 69 VYNWFQNRRARLKRKQ 84
V+ WFQN +AR ++K+
Sbjct: 86 VFYWFQNHKARERQKK 101
>sp|Q7XM13|WOX1A_ORYSJ WUSCHEL-related homeobox 1A OS=Oryza sativa subsp. japonica
GN=WOX1A PE=2 SV=2
Length = 289
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 83 KQ 84
K+
Sbjct: 95 KK 96
>sp|Q33DK0|WOX1B_ORYSJ WUSCHEL-related homeobox 1B OS=Oryza sativa subsp. japonica
GN=WOX1B PE=1 SV=2
Length = 289
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 24 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 82
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 83 KQ 84
K+
Sbjct: 95 KK 96
>sp|Q9ZVF5|WOX6_ARATH WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana GN=WOX6 PE=2
SV=2
Length = 271
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 78
A RW PTP Q+ LE +Y TP ++IQ + ++L K+G+I NV+ WFQN +A
Sbjct: 58 ATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKA 115
>sp|Q8H1D2|WOX5_ARATH WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana GN=WOX5 PE=2
SV=1
Length = 182
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT QL+IL ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 84 QSGV 87
+ +
Sbjct: 84 RRKI 87
>sp|Q9SB92|WUS_ARATH Protein WUSCHEL OS=Arabidopsis thaliana GN=WUS PE=1 SV=2
Length = 292
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 20 TARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
T RQ RWTPT Q++IL+ +Y + +P +IQ +TA L + G+I NV+ WFQN
Sbjct: 31 TCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQN 90
Query: 76 RRARLKRKQ 84
+AR ++K+
Sbjct: 91 HKARERQKK 99
>sp|A3BKM2|WOX13_ORYSJ WUSCHEL-related homeobox 13 OS=Oryza sativa subsp. japonica
GN=WOX13 PE=2 SV=1
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 9 DPFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 67
PF + G +++ + R P P Q++ILE +++ P + +I + +L ++GQ+ +
Sbjct: 120 SPFSSVGEERVPDPKPRRNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDA 179
Query: 68 NVYNWFQNRRARLKRK 83
NV+ WFQNR++R K K
Sbjct: 180 NVFYWFQNRKSRSKNK 195
>sp|Q84VT7|WUS_SOLLC Protein WUSCHEL OS=Solanum lycopersicum GN=WUS PE=2 SV=1
Length = 272
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 21 ARQRWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I NV+ WFQN +AR
Sbjct: 23 SSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKAR 82
Query: 80 LKRKQ-----SGVVPNNAESEAETVTH 101
++K+ + NN S + + H
Sbjct: 83 ERQKKRLIAAASATDNNNISSMQMIPH 109
>sp|Q8LL11|WUS_PETHY Protein WUSCHEL OS=Petunia hybrida GN=WUS PE=2 SV=1
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 16 SQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYN 71
S RQ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I NV+
Sbjct: 36 SSNFMCRQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFY 95
Query: 72 WFQNRRARLKRKQ 84
WFQN +AR ++K+
Sbjct: 96 WFQNHKARERQKK 108
>sp|Q9FFK0|WOX7_ARATH WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana GN=WOX7 PE=2
SV=1
Length = 122
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 83
RW PT Q+++L ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQK 88
>sp|Q8W0F1|WOX9_ORYSJ WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica
GN=WOX9 PE=2 SV=1
Length = 200
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 24 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR---- 79
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73
Query: 80 -LKRKQSGVVPNNAESE 95
KR++ P++ ++
Sbjct: 74 HKKRRRGASSPDSGSND 90
>sp|Q0D3I7|WOX11_ORYSJ WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica
GN=WOX11 PE=2 SV=1
Length = 262
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 20 RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 73
>sp|Q10M29|WOX6_ORYSJ WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. japonica
GN=WOX6 PE=2 SV=1
Length = 328
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>sp|A2XG77|WOX6_ORYSI WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. indica GN=WOX6
PE=2 SV=1
Length = 328
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>sp|Q6X7J3|WOX11_ARATH WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana GN=WOX11 PE=2
SV=2
Length = 268
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 68
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 69 VYNWFQN 75
V+ WFQN
Sbjct: 78 VFYWFQN 84
>sp|Q6Z3L4|WOX10_ORYSJ WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. japonica
GN=WOX10 PE=2 SV=1
Length = 284
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 40 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 94
>sp|A2YST1|WOX10_ORYSI WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. indica
GN=WOX10 PE=2 SV=1
Length = 284
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 40 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 94
>sp|Q8GY25|WOX12_ARATH WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana GN=WOX12 PE=2
SV=1
Length = 268
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 75
R RW+P P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQN 72
>sp|Q91926|VENT1_XENLA Homeobox protein vent1 OS=Xenopus laevis GN=vent1 PE=1 SV=1
Length = 264
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 19 LTARQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 76
L R R TP Q+ LE +++ + G P ++K LA Q+SE V WFQNR
Sbjct: 128 LQRRLRTAFTPQQISKLEQAFNKQRYLGAPERKK-------LATSLQLSEIQVKTWFQNR 180
Query: 77 RARLKR----KQSGVVP 89
R +LKR KQ +VP
Sbjct: 181 RMKLKRQIQDKQHSLVP 197
>sp|P15142|HM7X_CHICK Homeobox protein CHOX-7 (Fragment) OS=Gallus gallus GN=CHOX-7 PE=4
SV=1
Length = 124
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 13/113 (11%)
Query: 14 SGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMT--AELAKHGQISETNVYN 71
SG+ K + R+R T QL LE + CK K +T +++A ++SE V
Sbjct: 19 SGAGK-SRRRRTAFTSEQLLELEKEFH-CK------KYLSLTERSQIAHALKLSEVQVKI 70
Query: 72 WFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRD 124
WFQNRRA+ KR ++G V N + E V + + + +P + QSL + P P D
Sbjct: 71 WFQNRRAKWKRIKAGNVSNRS---GEPVRNPKIVRAHPGARQSLRRAQPAPAD 120
>sp|Q91685|MIX2_XENLA Homeobox protein Mix.2 OS=Xenopus laevis GN=mix-b PE=2 SV=1
Length = 369
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 5 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 64
NP D + S SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 82 NPEPDSSLVSASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 133
Query: 65 SETNVYNWFQNRRARLKRK 83
E+ + WFQNRRA+++R+
Sbjct: 134 PESRIQVWFQNRRAKVRRQ 152
>sp|Q9JLZ9|VAX2_RAT Ventral anterior homeobox 2 OS=Rattus norvegicus GN=Vax2 PE=2 SV=1
Length = 292
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 82 RKQSGVVPNNAESEA 96
+ QS + A S A
Sbjct: 159 KDQSRDLEKRASSSA 173
>sp|Q7Y0V7|ROC6_ORYSJ Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp.
japonica GN=ROC6 PE=2 SV=2
Length = 872
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K+ Q
Sbjct: 130 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQ 181
>sp|Q801E1|VAX2_DANRE Ventral anterior homeobox 2 OS=Danio rerio GN=vax2 PE=2 SV=1
Length = 307
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 105 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 159
Query: 82 RKQSGVVPNNAESEAETV 99
+ Q+ + S +E++
Sbjct: 160 KDQTKDTDKRSSSTSESL 177
>sp|Q8GRL4|HOX19_ORYSJ Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp.
japonica GN=HOX19 PE=2 SV=1
Length = 292
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ R++ T Q +LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 124 STRKKLRLTKEQSALLEDRFREHSTLNPKQKVA-----LAKQLNLRPRQVEVWFQNRRAR 178
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAPPP 122
K KQ+ V + ET+T R Q + +++L+ + PPP
Sbjct: 179 TKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPP 222
>sp|A2XE76|HOX19_ORYSI Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica
GN=HOX19 PE=2 SV=1
Length = 292
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 20 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 79
+ R++ T Q +LE + E KQK+ LAK + V WFQNRRAR
Sbjct: 124 STRKKLRLTKEQSALLEDRFREHSTLNPKQKVA-----LAKQLNLRPRQVEVWFQNRRAR 178
Query: 80 LKRKQSGVVPNNAESEAETVTHAESRKQNP-ESIQSLEDSAPPP 122
K KQ+ V + ET+T R Q + +++L+ + PPP
Sbjct: 179 TKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPP 222
>sp|A2Z0Q0|HOX25_ORYSI Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp.
indica GN=HOX25 PE=2 SV=1
Length = 260
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 15 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQ-DMTAELAKHGQISETNVYNWF 73
GS AR+R T Q++ LE ++E K+K++ + +ELA+ I+ V WF
Sbjct: 15 GSSSAAARKR-RLTAEQVRALERSFEE-----EKRKLEPERKSELARRLGIAPRQVAVWF 68
Query: 74 QNRRARLKRKQ 84
QNRRAR K KQ
Sbjct: 69 QNRRARWKTKQ 79
>sp|Q9PU20|VAX2A_XENLA Ventral anterior homeobox 2a OS=Xenopus laevis GN=vax2-a PE=2 SV=1
Length = 302
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 81
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 107 RTRTSFTAEQLYRLELEFQRCQYVVGRER-----TELARQLNLSETQVKVWFQNRRTKQK 161
Query: 82 RKQS 85
+ QS
Sbjct: 162 KDQS 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,062,420
Number of Sequences: 539616
Number of extensions: 2490431
Number of successful extensions: 7740
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 378
Number of HSP's that attempted gapping in prelim test: 7210
Number of HSP's gapped (non-prelim): 851
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)