BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031308
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q749B4|RL17_GEOSL 50S ribosomal protein L17 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplQ PE=3 SV=1
Length = 175
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ L HERI TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSLFAHERITTTDAKAKELRSIAEKMITLGKRGDLHAVRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDR-ENELRQS 123
+++R V+ KLF+ +A RYK+R GGYTR+++ IR GD AP++ I+ ++ E ++++S
Sbjct: 68 SYIRDKKVVTKLFSTIAPRYKERDGGYTRIIKLGIRPGDCAPLSVIELVEEQFEKKVKKS 127
Query: 124 KPAVP 128
KP P
Sbjct: 128 KPTAP 132
>sp|A0L5Z9|RL17_MAGSM 50S ribosomal protein L17 OS=Magnetococcus sp. (strain MC-1)
GN=rplQ PE=3 SV=1
Length = 126
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 87/114 (76%), Gaps = 2/114 (1%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L+R T HR +M++ M+ L KHERIETTV +AKE+R +A+ ++ LGK G L A R+A
Sbjct: 8 RRLSRDTSHRQAMIKNMLVSLFKHERIETTVPRAKELRPVAEKVITLGKRGDLHARRQAL 67
Query: 65 AFVRGD-DVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRE 117
+ + GD +V+HKLFT+LA R KDR GGYTR+L++R R GD APM++I+ V+R+
Sbjct: 68 SILNGDKEVVHKLFTDLAERNKDRQGGYTRILKTRFRYGDCAPMSFIE-LVERD 120
>sp|A0LIL8|RL17_SYNFM 50S ribosomal protein L17 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rplQ PE=3 SV=1
Length = 151
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 83/126 (65%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR T HR++M R MV+ L++HERI TT+ KAKE+RR AD M+ LGK G L A R+
Sbjct: 8 RKLNRATSHRLAMFRNMVTSLLQHERIFTTLPKAKELRRWADWMISLGKRGDLHARRQVM 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRENELRQSK 124
A VR + + K+F EL RY+ R GGYTR++++ R GDA+PM I+ + + R+ K
Sbjct: 68 ACVREKETVQKIFAELGPRYQSRPGGYTRIVKAGYRRGDASPMCLIELITEAKQPPRKEK 127
Query: 125 PAVPQP 130
P P
Sbjct: 128 AKKPAP 133
>sp|B3E858|RL17_GEOLS 50S ribosomal protein L17 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=rplQ PE=3 SV=1
Length = 124
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 80/107 (74%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ L+ HERI TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSLLNHERIVTTDAKAKEIRSVAEKMITLGKRGDLHAHRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A++R V+ KLF+ +A RYKDRAGGYTR+++ R+GDAA ++ I+
Sbjct: 68 AYIREKSVVTKLFSTIAPRYKDRAGGYTRIIKLGQRLGDAASLSVIE 114
>sp|A1ALW8|RL17_PELPD 50S ribosomal protein L17 OS=Pelobacter propionicus (strain DSM
2379) GN=rplQ PE=3 SV=1
Length = 127
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 77/107 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR +M R MV+ L HE+I TT AKAKE+R +A+ M+ LGK G L + R AA
Sbjct: 8 RRLGRKTSHREAMFRNMVTSLFAHEKITTTDAKAKEIRSVAEKMITLGKRGDLHSTRIAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
AF+R V+ KLF+ +A RYK+RAGGYTR+++ R GDAAPM+ I+
Sbjct: 68 AFIREKSVVTKLFSTIAPRYKERAGGYTRIIKVGSRNGDAAPMSIIE 114
>sp|Q250K3|RL17_DESHY 50S ribosomal protein L17 OS=Desulfitobacterium hafniense (strain
Y51) GN=rplQ PE=3 SV=1
Length = 112
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 78/108 (72%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R TGHR SMLR + + L+KHERI+TT A+AKEV +A+ M+ LGK+G L A R A
Sbjct: 3 YRKLGRNTGHRGSMLRNLATSLLKHERIQTTEARAKEVNAIAEKMITLGKQGDLAARRNA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
++ +DV+ KLFTE+A +Y DR GGYTR+++ R GDAA M I+
Sbjct: 63 LTYLLEEDVVTKLFTEIAPKYADRQGGYTRVIKVGPRRGDAAEMVLIE 110
>sp|B8G1Z5|RL17_DESHD 50S ribosomal protein L17 OS=Desulfitobacterium hafniense (strain
DCB-2 / DSM 10664) GN=rplQ PE=3 SV=1
Length = 112
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 78/108 (72%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R TGHR SMLR + + L+KHERI+TT A+AKEV +A+ M+ LGK+G L A R A
Sbjct: 3 YRKLGRNTGHRGSMLRNLATSLLKHERIQTTEARAKEVNAIAEKMITLGKQGDLAARRNA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
++ +DV+ KLFTE+A +Y DR GGYTR+++ R GDAA M I+
Sbjct: 63 LTYLLEEDVVTKLFTEIAPKYADRQGGYTRVIKVGPRRGDAAEMVLIE 110
>sp|Q39XX8|RL17_GEOMG 50S ribosomal protein L17 OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=rplQ PE=3 SV=1
Length = 178
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 82/114 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ ++HERI TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSFLEHERITTTDAKAKELRSIAEKMITLGKRGDLHAQRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDREN 118
+++R V+ KLF+ +A RYK+R GGYTR+++ IR GD AP++ I+ ++ N
Sbjct: 68 SYIRDKKVVTKLFSTIAPRYKERDGGYTRIIKLGIRPGDNAPLSVIELVEEQVN 121
>sp|C6E4M9|RL17_GEOSM 50S ribosomal protein L17 OS=Geobacter sp. (strain M21) GN=rplQ
PE=3 SV=1
Length = 168
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 79/107 (73%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ ++HE+I TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSFLQHEKITTTDAKAKELRSIAEKMITLGKRGDLHATRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A++R V+ KLFTE+A RY +R GGYTR+++ IR GD AP++ ++
Sbjct: 68 AYIRDKKVVTKLFTEIAPRYTERPGGYTRIIKLGIRPGDNAPVSVLE 114
>sp|B6IRT1|RL17_RHOCS 50S ribosomal protein L17 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplQ PE=3 SV=1
Length = 139
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RK NR T HR++M M + L+KHE+I+TT+ KAK++R + + ++ LGK+G L R A
Sbjct: 8 RKFNRTTSHRLAMFSNMANALIKHEQIKTTLPKAKDLRPIVERLITLGKKGGLANKRLAY 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRENE 119
A +R D++ KLFT LA RYK R GGYTR+L++ R GDAAPM I+ VDR+ E
Sbjct: 68 AELRDHDMVEKLFTTLAERYKGRPGGYTRVLKAGFRYGDAAPMGVIE-LVDRDPE 121
>sp|B9M6F1|RL17_GEOSF 50S ribosomal protein L17 OS=Geobacter sp. (strain FRC-32) GN=rplQ
PE=3 SV=1
Length = 181
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 78/107 (72%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
++L R T HR++M R MV+ + HERI TT AKAK +R +A+ M+ LGK+G L A R+AA
Sbjct: 8 KRLGRTTSHRIAMYRNMVTSFLNHERITTTDAKAKGLRSIAEKMITLGKKGDLNAMRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
+F+R V+ KLFT +A RY +RAGGYTR+++ IR GD AP++ I+
Sbjct: 68 SFIRDKKVVTKLFTTIAPRYAERAGGYTRIIKLGIRPGDNAPLSVIE 114
>sp|A5GAU7|RL17_GEOUR 50S ribosomal protein L17 OS=Geobacter uraniireducens (strain Rf4)
GN=rplQ PE=3 SV=1
Length = 184
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
++L R T HR++M R MV+ + HERI TT KAKE+R +A+ M+ LGK+G L A R+AA
Sbjct: 8 KRLGRTTSHRIAMYRNMVTSFLNHERITTTDVKAKELRSIAEKMITLGKKGDLHAMRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRE 117
+++R V+ KLFT +A RY +RAGGYTR+++ IR GD AP++ I+ V+ E
Sbjct: 68 SYIRDKKVVTKLFTAIAPRYAERAGGYTRIIKLGIRPGDNAPLSVIE-LVEEE 119
>sp|B0TC86|RL17_HELMI 50S ribosomal protein L17 OS=Heliobacterium modesticaldum (strain
ATCC 51547 / Ice1) GN=rplQ PE=3 SV=1
Length = 112
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 78/108 (72%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RK +RPT HR ++LR + + L+KH +I TT KAKE+RR+AD M+ LGK+G L A R+A
Sbjct: 3 YRKFSRPTNHRRALLRNITTSLLKHGKIVTTEPKAKELRRIADKMITLGKQGDLHARRQA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
AF++ + V+ LF E+A +Y R GGYTR+L++ R GDAAPM ++
Sbjct: 63 LAFIQEESVVTHLFKEIAPKYATRQGGYTRVLKAGFRRGDAAPMCIVE 110
>sp|Q2RQY5|RL17_RHORT 50S ribosomal protein L17 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rplQ PE=3 SV=1
Length = 140
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR + HR +M M + L+KHE+I+TT+ KAK++R +A+ ++ LGK G+L R+A
Sbjct: 8 RKLNRTSSHRKAMFANMAASLLKHEQIKTTLPKAKDLRPIAEKLITLGKGGTLHDRRQAH 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRE 117
A +R D V+ KLF L RYKDR GGY+R+L++ R GDAAPMA I+ VDR+
Sbjct: 68 AILRDDAVVAKLFAVLGPRYKDRQGGYSRILKAGFRYGDAAPMAVIE-LVDRD 119
>sp|A1REE0|RL17_SHESW 50S ribosomal protein L17 OS=Shewanella sp. (strain W3-18-1)
GN=rplQ PE=3 SV=1
Length = 131
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 76/107 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|A4YBV7|RL17_SHEPC 50S ribosomal protein L17 OS=Shewanella putrefaciens (strain CN-32
/ ATCC BAA-453) GN=rplQ PE=3 SV=1
Length = 131
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 76/107 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|Q8EK46|RL17_SHEON 50S ribosomal protein L17 OS=Shewanella oneidensis (strain MR-1)
GN=rplQ PE=3 SV=1
Length = 131
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 76/107 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|Q0I079|RL17_SHESR 50S ribosomal protein L17 OS=Shewanella sp. (strain MR-7) GN=rplQ
PE=3 SV=1
Length = 131
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 76/107 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|Q0HNR1|RL17_SHESM 50S ribosomal protein L17 OS=Shewanella sp. (strain MR-4) GN=rplQ
PE=3 SV=1
Length = 131
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 76/107 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|A0KRQ0|RL17_SHESA 50S ribosomal protein L17 OS=Shewanella sp. (strain ANA-3) GN=rplQ
PE=3 SV=1
Length = 131
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 76/107 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|B6JEX2|RL17_OLICO 50S ribosomal protein L17 OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=rplQ PE=3 SV=1
Length = 139
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMAASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRE 117
+ +R D + KLF LA RYKDR GGYTR++++ R GD APMA I+ FVDR+
Sbjct: 68 SELRDHDQVKKLFDALAARYKDRQGGYTRIIKAGFRYGDNAPMAVIE-FVDRD 119
>sp|C0Q9U6|RL17_DESAH 50S ribosomal protein L17 OS=Desulfobacterium autotrophicum (strain
ATCC 43914 / DSM 3382 / HRM2) GN=rplQ PE=3 SV=1
Length = 120
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%)
Query: 6 KLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAA 65
KLNR + HR +M R MV+ L KH I+TT AKAKE+R+LAD MV L K G L A R+A +
Sbjct: 9 KLNRTSSHRKAMFRNMVTSLFKHSSIKTTEAKAKELRKLADKMVTLAKRGDLHARRQAFS 68
Query: 66 FVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVD 115
+R DV+H+LF + ++ R GGYTR+ + +R GDAAPM I+ D
Sbjct: 69 IIREKDVVHQLFNDAPSKFASRQGGYTRITKLGLRSGDAAPMTTIELICD 118
>sp|B1KM34|RL17_SHEWM 50S ribosomal protein L17 OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=rplQ PE=3 SV=1
Length = 132
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLF EL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFNELGPRYQERPGGYTRILKCGLRTGDKAPMAYIE 114
>sp|Q8RE45|RL17_FUSNN 50S ribosomal protein L17 OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=rplQ PE=3 SV=1
Length = 116
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 78/108 (72%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R HR +ML+ M L+K ERIETTV +AKE+R+ A+ M+ GK+ +L + R A
Sbjct: 7 YRKLGRRADHRKAMLKNMTISLIKAERIETTVTRAKELRKFAERMITFGKKNTLASRRNA 66
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
AF+R ++V+ K+F E+A +Y +R GGYTR++++ +R GD+A MA I+
Sbjct: 67 FAFLRDEEVVAKIFNEIAPKYAERNGGYTRIIKTSVRKGDSAEMAIIE 114
>sp|Q9S0Q7|RL17_SHEVD 50S ribosomal protein L17 OS=Shewanella violacea (strain JCM 10179
/ CIP 106290 / LMG 19151 / DSS12) GN=rplQ PE=3 SV=1
Length = 131
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLF EL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFNELGPRYQERPGGYTRILKCGLRTGDKAPMAYIE 114
>sp|A3Q9A8|RL17_SHELP 50S ribosomal protein L17 OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=rplQ PE=3 SV=1
Length = 130
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLF EL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFNELGPRYQERPGGYTRILKCGLRTGDKAPMAYIE 114
>sp|A9KWC7|RL17_SHEB9 50S ribosomal protein L17 OS=Shewanella baltica (strain OS195)
GN=rplQ PE=3 SV=1
Length = 131
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|A6WHV4|RL17_SHEB8 50S ribosomal protein L17 OS=Shewanella baltica (strain OS185)
GN=rplQ PE=3 SV=1
Length = 131
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|A3DA46|RL17_SHEB5 50S ribosomal protein L17 OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=rplQ PE=3 SV=1
Length = 131
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|B8EBH9|RL17_SHEB2 50S ribosomal protein L17 OS=Shewanella baltica (strain OS223)
GN=rplQ PE=3 SV=1
Length = 131
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIE 114
>sp|B0TLY7|RL17_SHEHH 50S ribosomal protein L17 OS=Shewanella halifaxensis (strain
HAW-EB4) GN=rplQ PE=3 SV=1
Length = 130
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMACSIVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL R++DR GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRFQDRPGGYTRILKCGLRTGDKAPMAYIE 114
>sp|Q8ETV8|RL17_OCEIH 50S ribosomal protein L17 OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=rplQ PE=3
SV=1
Length = 117
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKL R T RM++LR + S L+ HERIETT AKAKE+R + + M+ LGK G L A R+AA
Sbjct: 3 RKLGRKTDSRMALLRNLASDLIIHERIETTEAKAKELRSIVEKMITLGKRGDLHARRQAA 62
Query: 65 AFV------RGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
AF+ ++VI KLF ++A RY+DR GGYTR+L+ R GD A MA I+
Sbjct: 63 AFLYNKETDEDNNVIQKLFDDVAARYEDRQGGYTRVLKLNERQGDGAKMAIIE 115
>sp|Q2RFS7|RL17_MOOTA 50S ribosomal protein L17 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplQ PE=3 SV=1
Length = 112
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 76/108 (70%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R GHR MLR +V+ L+KH +IETT +AKE++ LA+ M+ LGK G L + R+A
Sbjct: 3 YRKLGRLAGHRKMMLRNIVTSLLKHGKIETTELRAKELKSLAEKMITLGKRGDLHSRRQA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A++ +DV+ KLF E+ RY D+ GGYTR++++ R GD APM I+
Sbjct: 63 LAYLLDEDVVTKLFKEIGPRYADKNGGYTRIVKTGFRQGDGAPMVLIE 110
>sp|Q0AUL0|RL17_SYNWW 50S ribosomal protein L17 OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=rplQ PE=3 SV=1
Length = 113
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 78/108 (72%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+R+L + HR S+LR V+ L+K E+I TT +AKE++RL + M+ LGK G L A R+A
Sbjct: 3 YRRLGLRSDHRRSVLRNSVTSLLKEEKISTTETRAKEIKRLTEKMITLGKRGDLHARRQA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
AA++ D+V+ KLF+++A RY++R GGYTRL+++ R GD APM I+
Sbjct: 63 AAYIMSDEVVQKLFSDIAARYEERNGGYTRLVKTGYRKGDGAPMVMIE 110
>sp|Q3SSU1|RL17_NITWN 50S ribosomal protein L17 OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=rplQ PE=3 SV=1
Length = 138
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMSASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLAKRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRENE 119
+ +R D + KLF LA RYKDR GGYTR++++ R GD APMA I+ FVDR+ E
Sbjct: 68 SEMRDIDQVKKLFDVLAPRYKDRHGGYTRIIKAGFRYGDNAPMAVIE-FVDRDVE 121
>sp|A8G1C4|RL17_SHESH 50S ribosomal protein L17 OS=Shewanella sediminis (strain HAW-EB3)
GN=rplQ PE=3 SV=1
Length = 132
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLF EL RY++R GGYTR+L+ +R GD APMA+I+
Sbjct: 68 ARTRDAEVVGKLFNELGPRYQERPGGYTRILKCGLRTGDKAPMAFIE 114
>sp|Q1H4L1|RL17_METFK 50S ribosomal protein L17 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rplQ PE=3 SV=1
Length = 131
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR + HR +MLR M + L++HE I+TT+ KAKE+RR+A+ ++ LGK+ +L R A
Sbjct: 8 RKLNRTSSHRQAMLRNMANSLLRHEIIKTTLPKAKELRRVAEPLITLGKDATLANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDR 116
+ +R D++ KLF EL RY+ R GGY R+L+ RVGD APMA ++ VDR
Sbjct: 68 SRLRDRDIVGKLFNELGPRYQTRNGGYLRILKCGFRVGDNAPMALVE-LVDR 118
>sp|Q6AP42|RL17_DESPS 50S ribosomal protein L17 OS=Desulfotalea psychrophila (strain
LSv54 / DSM 12343) GN=rplQ PE=3 SV=1
Length = 129
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 76/107 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKL R + HR +M R MV+ L +HERI TT KAKE+R +A+ M+ LGK G L A R+A
Sbjct: 8 RKLGRTSSHRDAMFRNMVTSLFEHERIVTTKEKAKELRPIAEKMITLGKRGDLHARRQAL 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
++VR V+HKLF E+A ++ DR GGYTR++++ +R GD A MA I+
Sbjct: 68 SYVRCAGVVHKLFGEIAEQFADRKGGYTRIIQTGVRRGDNASMAIIE 114
>sp|A1W334|RL17_ACISJ 50S ribosomal protein L17 OS=Acidovorax sp. (strain JS42) GN=rplQ
PE=3 SV=1
Length = 129
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
RKLNR + HR++ML+ M++ L++HE I+TT+ KAKE+RR+ + M+ L KE S+ R A
Sbjct: 7 LRKLNRTSSHRLAMLQNMMNSLIEHEAIKTTLPKAKELRRVIEPMITLAKEDSVANRRLA 66
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDR 116
+R D + KLF +L R+K R GGYTR+L+ RVGD APMAY++ VDR
Sbjct: 67 FNRLRDRDSVTKLFNDLGPRFKTRPGGYTRILKMGFRVGDNAPMAYVE-LVDR 118
>sp|B9MBW3|RL17_ACIET 50S ribosomal protein L17 OS=Acidovorax ebreus (strain TPSY)
GN=rplQ PE=3 SV=1
Length = 129
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
RKLNR + HR++ML+ M++ L++HE I+TT+ KAKE+RR+ + M+ L KE S+ R A
Sbjct: 7 LRKLNRTSSHRLAMLQNMMNSLIEHEAIKTTLPKAKELRRVIEPMITLAKEDSVANRRLA 66
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDR 116
+R D + KLF +L R+K R GGYTR+L+ RVGD APMAY++ VDR
Sbjct: 67 FNRLRDRDSVTKLFNDLGPRFKTRPGGYTRILKMGFRVGDNAPMAYVE-LVDR 118
>sp|Q18CI8|RL17_CLOD6 50S ribosomal protein L17 OS=Clostridium difficile (strain 630)
GN=rplQ PE=3 SV=1
Length = 113
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 78/111 (70%)
Query: 1 MTKFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAA 60
M K+RKL R T HR MLR +V+ L++ RIETTV +AKE RR+A+ M+ L K G L A
Sbjct: 1 MAKYRKLGRETAHRNLMLRNLVTCLLRSGRIETTVTRAKETRRMAEKMITLAKRGDLHAR 60
Query: 61 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
R+ A+V + V++ LFT+LA +Y +R GGYTR+++ R GDAA MA+I+
Sbjct: 61 RQVLAYVMDETVVNNLFTDLAPKYAERNGGYTRIIKIGPRKGDAAEMAFIE 111
>sp|B8CNF9|RL17_SHEPW 50S ribosomal protein L17 OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=rplQ PE=3 SV=1
Length = 130
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMACSIVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL R+++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRFQERPGGYTRILKCGLRTGDKAPMAYIE 114
>sp|A8GZ01|RL17_SHEPA 50S ribosomal protein L17 OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=rplQ PE=3 SV=1
Length = 130
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 75/107 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMACSIVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
A R +V+ KLFTEL R+++R GGYTR+L+ +R GD APMAYI+
Sbjct: 68 ARTRDAEVVGKLFTELGPRFQERPGGYTRILKCGLRTGDKAPMAYIE 114
>sp|A8ZV83|RL17_DESOH 50S ribosomal protein L17 OS=Desulfococcus oleovorans (strain DSM
6200 / Hxd3) GN=rplQ PE=3 SV=1
Length = 208
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 72/106 (67%)
Query: 6 KLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAA 65
KL R HR +M R MV+ L+KHE+I+TT AKAKE+RR AD+++ L K G L A R+ A
Sbjct: 9 KLGRTGSHRNAMFRNMVTSLLKHEKIQTTDAKAKELRRWADHVITLAKRGDLHARRQVMA 68
Query: 66 FVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
VR +V+HKLF E A R+ R GGYTRL + R GDAAP+ I+
Sbjct: 69 IVREKNVVHKLFAEAAERFGSREGGYTRLTKIGARPGDAAPVTLIE 114
>sp|Q1QN05|RL17_NITHX 50S ribosomal protein L17 OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=rplQ PE=3 SV=1
Length = 138
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMAASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLDKRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRE 117
+ +R D + KLF LA RYKDR GGYTR++++ R GD APMA I+ FVDR+
Sbjct: 68 SEMRDIDQVKKLFAVLAPRYKDRQGGYTRIIKAGFRYGDNAPMAVIE-FVDRD 119
>sp|Q2S938|RL17_HAHCH 50S ribosomal protein L17 OS=Hahella chejuensis (strain KCTC 2396)
GN=rplQ PE=3 SV=1
Length = 129
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RK NR + HR SM R M + LV+HE I+TTV KAKE+RR+A+ ++ L K S+ R A
Sbjct: 8 RKFNRTSAHRKSMFRNMAASLVEHELIKTTVPKAKELRRVAEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDR 116
+ +R D + KLF E+ RYKDR GGY R+L+ +R GD+APMA+++ VDR
Sbjct: 68 SRLRSRDAVTKLFEEIGPRYKDRPGGYLRILKCGLRPGDSAPMAFVE-LVDR 118
>sp|C6DFS2|RL17_PECCP 50S ribosomal protein L17 OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=rplQ PE=3 SV=1
Length = 130
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDR 116
A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYI+ VDR
Sbjct: 68 ARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIE-LVDR 118
>sp|Q6CZZ6|RL17_ERWCT 50S ribosomal protein L17 OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=rplQ PE=3 SV=1
Length = 130
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDR 116
A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYI+ VDR
Sbjct: 68 ARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIE-LVDR 118
>sp|B7GJ95|RL17_ANOFW 50S ribosomal protein L17 OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=rplQ PE=3 SV=1
Length = 120
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 79/116 (68%), Gaps = 8/116 (6%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R + R ++LR +V+ L+ +ERIETT A+AKE+R + + M+ LGK G L A R+A
Sbjct: 3 YRKLGRTSSQRKALLRDLVTDLIINERIETTEARAKELRSVVEKMITLGKRGDLHARRQA 62
Query: 64 AAFVR--------GDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYID 111
AAFVR G D I KLF+++A RY+DR GGYTR+++ R GD APM I+
Sbjct: 63 AAFVRKEVANTETGQDAIQKLFSDIAPRYQDRQGGYTRIMKLGPRRGDGAPMVIIE 118
>sp|Q134V4|RL17_RHOPS 50S ribosomal protein L17 OS=Rhodopseudomonas palustris (strain
BisB5) GN=rplQ PE=3 SV=1
Length = 136
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMCAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLDKRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIDRFVDRENELRQSK 124
+ +R D + KLF LA RYKDR GGYTR++++ R GD APMA I+ FVDR+ + + K
Sbjct: 68 SEMRDLDQVRKLFGVLAPRYKDRNGGYTRIIKAGFRYGDNAPMAVIE-FVDRDEDAK-GK 125
Query: 125 PAVPQPPPRAA 135
+ P AA
Sbjct: 126 DSGPTQESEAA 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,258,314
Number of Sequences: 539616
Number of extensions: 2117023
Number of successful extensions: 8172
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 7164
Number of HSP's gapped (non-prelim): 824
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)