BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031309
(161 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/99 (88%), Positives = 93/99 (93%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGY SNGA QG QS+GDS+NTTIFVGGLDPNVTDEDL+QPFSQYGEI SVKIPVGKGCG
Sbjct: 275 GGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCG 334
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQFANR+NAEEAL KLNGTVIGKQ+VRLSWGRNPANKQ
Sbjct: 335 FVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQ 373
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQF 107
Q Q EG N TI++G L + + L F GEIAS+K+ + +G GFV+F
Sbjct: 82 QKQQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEF 141
Query: 108 ANRENAEEALHKLNGTVI--GKQSVRLSW 134
AE+ L G ++ +Q RL+W
Sbjct: 142 LTHATAEKVLQNYGGILMPNTEQPFRLNW 170
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 107
G + ++ + +IFVG L +VTD L++ F S+Y + + K+ KG GFV+F
Sbjct: 176 GDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRF 235
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 236 GDDSERTQAMTEMNGVYCSSRPMRI 260
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGY SNGA GQ Q++GDS+NTTIFVGGLDPNVTDEDL+QPFSQYGEI SVKIPVGKGCG
Sbjct: 291 GGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCG 350
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPF 148
FVQFA+R NAEEAL KLNGTVIGKQ+VRLSWGRNPANKQ S F
Sbjct: 351 FVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDF 395
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 107
G + ++ + +IFVG L +VTD L + F S+Y + + K+ KG GFV+F
Sbjct: 192 GDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRF 251
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG +++R+
Sbjct: 252 GDDNERTQAMTEMNGVYCSSRAMRI 276
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N T+++G L + + L F+ GEI S+K+ + +G GFV+F AE+ L
Sbjct: 108 NRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVL 167
Query: 118 HKLNGTVI--GKQSVRLSW 134
G ++ +Q RL+W
Sbjct: 168 QNYAGILMPNTEQPFRLNW 186
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 92/99 (92%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGY++NG QG QSEGDS+NTTIFVGGLDPNVTDEDLRQPFSQYGEI SVKIPVGKGCG
Sbjct: 271 GGYSTNGYFSQGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCG 330
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQFANR +AEEAL KLNGTVIGKQ+VRLSWGRNPANKQ
Sbjct: 331 FVQFANRNDAEEALQKLNGTVIGKQTVRLSWGRNPANKQ 369
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEE 115
S N TI+VG L + + L FS GEI+S+K+ + +G GFV+F + AE+
Sbjct: 81 SENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEK 140
Query: 116 ALHKLNGTVI--GKQSVRLSW 134
L +G + +Q+ RL+W
Sbjct: 141 VLQNYSGMFMPSTEQTFRLNW 161
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 107
G + + + +IFVG L +VTD L + FS ++ + + K+ + KG GFV+F
Sbjct: 167 GDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRF 226
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 227 GDDNERSQAMTEMNGIYCSSRPMRI 251
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/99 (85%), Positives = 89/99 (89%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGY SNGA QG QS+GDSSN TIFVGGLDPNVTDEDL+QPFSQYGEI SVKIPV KGCG
Sbjct: 278 GGYGSNGASSQGFQSDGDSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVSKGCG 337
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQFANR NAEEAL KLNGTVIGKQ+VRLSWGRNP +KQ
Sbjct: 338 FVQFANRNNAEEALQKLNGTVIGKQTVRLSWGRNPGHKQ 376
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 107
G + ++ + +IFVG L +VTD L++ F S+Y + S K+ KG GFV+F
Sbjct: 179 GDKRSDNTPDLSIFVGDLAADVTDSLLQETFASKYQSVKSAKVVFDANTGRSKGYGFVRF 238
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 239 GDDTERTQAMTEMNGVYCSSRPMRI 263
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRE 111
S GD N TI +G L + + L F+ GEIAS+K+ + +G GFV+F
Sbjct: 91 SSGD--NKTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHA 148
Query: 112 NAEEALHKLNGTVI--GKQSVRLSW 134
AE+ L G ++ +Q RL+W
Sbjct: 149 TAEKVLQNYGGILMPNTEQPFRLNW 173
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 90/99 (90%), Gaps = 3/99 (3%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGYASNGA QS+GDS NTTIFVGGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCG
Sbjct: 270 GGYASNGA---SVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 326
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQFANR NAE+AL KLNGTVIGKQ+VRLSWGRNPANKQ
Sbjct: 327 FVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQ 365
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAE 114
++ N TI+VG L + + L F+ GE+AS+K+ K G GFV+F + AE
Sbjct: 80 NADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAE 139
Query: 115 EALHKLNGTVI--GKQSVRLSW 134
+ L G ++ Q RL+W
Sbjct: 140 KVLQGYAGVLMPNTDQPFRLNW 161
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 107
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 167 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 226
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 227 GDENERSQAMTEMNGVYCSSRPMRI 251
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/100 (87%), Positives = 91/100 (91%), Gaps = 3/100 (3%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGYASNGA QS+GDS NTTIFVGGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCG
Sbjct: 158 GGYASNGA---SVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 214
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
FVQFANR NAE+AL KLNGTVIGKQ+VRLSWGRNPANKQA
Sbjct: 215 FVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQA 254
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 107
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 55 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 114
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 115 GDENERSQAMTEMNGVYCSSRPMRI 139
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 96/114 (84%)
Query: 29 SSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY 88
S+Y Q LVL GG+ASNGA QG QS+GDS+NTTIFVGG+D +VTDEDLRQPFSQ+
Sbjct: 240 SAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQF 299
Query: 89 GEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
GE+ SVKIPVGKGC FVQFANR+NAE+AL LNGT IGKQ+VRLSWGR PANKQ
Sbjct: 300 GEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQ 353
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
TI+VG L + + L FS GE++SVKI K G GFV+F +R AE+ L
Sbjct: 66 TIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAAEKVLQS 125
Query: 120 LNGTVI--GKQSVRLSW----GRNPANKQASLSPFT 149
+G+++ +Q RL+W G A+ + LS F
Sbjct: 126 YSGSMMPNTEQPFRLNWASFAGERRADPGSDLSIFV 161
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD L++ F+ +Y + K+ + KG GFV+F +
Sbjct: 155 SDLSIFVGDLAADVTDSMLQETFAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTR 214
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 215 AMMEMNGAFCSSRPMRI 231
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 90/99 (90%), Gaps = 3/99 (3%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGYASNGA QS+GDS NTTIFVGGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCG
Sbjct: 176 GGYASNGA---SVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 232
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQFANR NAE+AL KLNGTVIGKQ+VRLSWGRNPANKQ
Sbjct: 233 FVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQ 271
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 107
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 73 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 132
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 133 GDENERSQAMTEMNGVYCSSRPMRI 157
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/114 (71%), Positives = 94/114 (82%)
Query: 29 SSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY 88
S+Y Q LVL GG+ASNG QG QS+GDS+NTTIFVGG+D +VTDEDLRQPFSQ+
Sbjct: 255 SAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQF 314
Query: 89 GEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
GE+ SVK+P GKGC FVQFANR+NAE+AL LNGT IGKQ+VRLSWGR PANKQ
Sbjct: 315 GEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQ 368
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS GE++SVKI K G GFV+F + AE+ L
Sbjct: 81 TVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAAAEKVLQS 140
Query: 120 LNGTVI--GKQSVRLSW----GRNPANKQASLSPF 148
+G+++ Q RL+W G A+ + LS F
Sbjct: 141 YSGSMMPNTDQPFRLNWASFAGERRADAGSDLSIF 175
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 170 SDLSIFVGDLAADVTDAMLQETFATKYASVKGAKVVADSNTGRSKGYGFVRFGDENEKTR 229
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 230 AITEMNGAYCSSRPMRI 246
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 91/103 (88%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
LVL GG ASNGA QG Q+ GDS+NTTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVG
Sbjct: 270 LVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVG 329
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFANR +AE+AL +LNGTVIGKQ+VRLSWGRNPA+KQ
Sbjct: 330 KGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQ 372
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEI--ASVKIPVGK------GCGFVQFANRENAEEAL 117
T++VG L + D LR F GE+ +S+KI K G GFV+F +R AE+ L
Sbjct: 82 TLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKIL 141
Query: 118 HKLNGTVI--GKQSVRLSW 134
H NGT++ +Q RL+W
Sbjct: 142 HSYNGTLMPNTEQPFRLNW 160
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 174 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 233
Query: 116 ALHKLNGTVIGKQSVRL 132
A++++NG + +R+
Sbjct: 234 AMNEMNGIYCSSRPMRI 250
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 91/103 (88%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
LVL GG ASNGA QG Q+ GDS+NTTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVG
Sbjct: 196 LVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVG 255
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFANR +AE+AL +LNGTVIGKQ+VRLSWGRNPA+KQ
Sbjct: 256 KGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQ 298
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + D LR F GE++S+KI K G GFV+F +R AE+ LH
Sbjct: 10 TLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKILHS 69
Query: 120 LNGTVI--GKQSVRLSW 134
NGT++ +Q RL+W
Sbjct: 70 YNGTLMPNTEQPFRLNW 86
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 100 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 159
Query: 116 ALHKLNGTVIGKQSVRL 132
A++++NG + +R+
Sbjct: 160 AMNEMNGIYCSSRPMRI 176
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 91/103 (88%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
LVL GG ASNGA QG Q+ GDS+NTTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVG
Sbjct: 288 LVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVG 347
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFANR +AE+AL +LNGTVIGKQ+VRLSWGRNPA+KQ
Sbjct: 348 KGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQ 390
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 192 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 251
Query: 116 ALHKLNGTVIGKQSVRL 132
A++++NG + +R+
Sbjct: 252 AMNEMNGIYCSSRPMRI 268
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 89/98 (90%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 104
GYASNG+ G QS+GD +NTTIF+GGLDPNVTDEDL+Q FSQ+GEI SVKIPVGKGCGF
Sbjct: 278 GYASNGSFSHGHQSDGDFTNTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGF 337
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
+QFANR+NAEEAL KLNGTVIGKQ+VRLSWGR+P NKQ
Sbjct: 338 IQFANRKNAEEALQKLNGTVIGKQTVRLSWGRSPTNKQ 375
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEE 115
S N TI+VG L + + L F+ GEI+S+K+ + +G GFV+F + AE+
Sbjct: 89 SENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEFFSHTTAEK 148
Query: 116 ALHKLNGTVI--GKQSVRLSWG 135
L + ++ +Q+ RL+W
Sbjct: 149 VLQNYSSILMPNTEQAFRLNWA 170
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD L + F S+Y + + K+ KG GFV+F + +
Sbjct: 183 SDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQ 242
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 243 AMTEMNGIYCSSRPMRI 259
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 88/102 (86%), Gaps = 3/102 (2%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
G QSE DS+NTTIFVGGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR N
Sbjct: 259 GTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNN 318
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQASL---SPFTSS 151
AEEAL KLNGT IGKQ+VRLSWGRNPANKQ + SP+T +
Sbjct: 319 AEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGA 360
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N TI++G L + + L + F+ GEI+S+K+ + +G GFV+F + AE+ L
Sbjct: 72 NKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVL 131
Query: 118 HKLNGTVI--GKQSVRLSW 134
G ++ +Q RL+W
Sbjct: 132 QNYAGILMPNAEQPFRLNW 150
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L +VTD L + F S Y + + K+ KG GFV+F + +A
Sbjct: 165 DLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQA 224
Query: 117 LHKLNGTVIGKQSVRL 132
+ ++NG + +R+
Sbjct: 225 MTQMNGVYCSSRPMRI 240
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 92/103 (89%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
LVL GG+A NG+ QG QS+GDS+NTTIFVGG+D +++DEDLRQPFSQ+GE+ SVKIP G
Sbjct: 292 LVLAGGHAPNGSMAQGSQSDGDSNNTTIFVGGIDSDISDEDLRQPFSQFGEVVSVKIPAG 351
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFA+R++AE+AL LNGT IGKQ+VRLSWGR+PANKQ
Sbjct: 352 KGCGFVQFADRKSAEDALQSLNGTTIGKQTVRLSWGRSPANKQ 394
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
TI+VG L + + L FS GE+ SVK+ K G GF++F + AE+ L
Sbjct: 107 TIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQN 166
Query: 120 LNGTVI--GKQSVRLSW 134
NG+++ Q RL+W
Sbjct: 167 YNGSMMPNADQPFRLNW 183
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD L++ F S+Y + K+ KG GFV+F +
Sbjct: 196 SDLSIFVGDLAADVTDAMLQETFSSKYLSVKGAKVVTDLNTGRSKGYGFVRFGDENERSR 255
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 256 AMMEMNGVYCSSRPMRI 272
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 78/86 (90%), Positives = 82/86 (95%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
QS+GDS NTTIFVGGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+A
Sbjct: 271 QSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDA 330
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQ 142
L KLNGTVIGKQ+VRLSWGRNPANKQ
Sbjct: 331 LQKLNGTVIGKQTVRLSWGRNPANKQ 356
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAE 114
++ N TI+VG L + + L F+ GE+AS+K+ K G GFV+F + AE
Sbjct: 80 NADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAE 139
Query: 115 EALHKLNGTVI--GKQSVRLSW 134
+ L G ++ Q RL+W
Sbjct: 140 KVLQGYAGVLMPNTDQPFRLNW 161
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 107
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 167 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 226
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 227 GDENERSQAMTEMNGVYCSSRPMRI 251
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 90/103 (87%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GG+A+NGA QG SEGD +NTTIFVGGLD + +DEDLRQPF Q+GE+ SVKIPVG
Sbjct: 289 VLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVG 348
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFA+R+NAEEA+H LNGTVIGKQ+VRLSWGR+P NK
Sbjct: 349 KGCGFVQFADRKNAEEAIHALNGTVIGKQTVRLSWGRSPGNKH 391
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L F+ GE+ S K+ K G GFV+F +R AE+ L
Sbjct: 102 TVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKVLQN 161
Query: 120 LNGTVI--GKQSVRLSWG------RNPANKQASLSPFT 149
NGT++ Q+ RL+W R ++ + LS F
Sbjct: 162 YNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFV 199
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 109
+S +S+ +IFVG L +VTD L++ F+ +Y I K+ + KG GFV+F +
Sbjct: 187 RSSDATSDLSIFVGDLAIDVTDAMLQETFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGD 246
Query: 110 RENAEEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 247 ENERTRAMTEMNGVYCSSRPMRI 269
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/90 (87%), Positives = 82/90 (91%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
G QSE DS+NTTIFVGGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR N
Sbjct: 283 GTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNN 342
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
AEEAL KLNGT IGKQ+VRLSWGRNPANKQ
Sbjct: 343 AEEALQKLNGTSIGKQTVRLSWGRNPANKQ 372
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N TI++G L + + L + F+ GEI+S+K+ + +G GFV+F + AE+ L
Sbjct: 96 NKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVL 155
Query: 118 HKLNGTVI--GKQSVRLSW 134
G ++ +Q RL+W
Sbjct: 156 QNYAGILMPNTEQPFRLNW 174
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L +VTD L + F S Y + + K+ KG GFV+F + +A
Sbjct: 189 DLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQA 248
Query: 117 LHKLNGTVIGKQSVRL 132
+ ++NG + +R+
Sbjct: 249 MTQMNGVYCSSRPMRI 264
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 89/103 (86%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
+VL GG+++NGA QG SEGD +NTTIFVGGLD + +DEDLRQPF Q+GE+ SVKIPVG
Sbjct: 288 VVLAGGHSANGAVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVG 347
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFA+R+NAEEA+ LNGTVIGKQ+VRLSWGR+P NK
Sbjct: 348 KGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 390
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L F+ GE+ S K+ K G GFV+F +R AE+ L
Sbjct: 101 TVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKVLQN 160
Query: 120 LNGTVI--GKQSVRLSWG------RNPANKQASLSPFT 149
NGT++ Q+ RL+W R ++ + LS F
Sbjct: 161 YNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFV 198
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 109
+S +S+ +IFVG L +VTD L+ F+ +Y I K+ + KG GFV+F +
Sbjct: 186 RSSDATSDLSIFVGDLAIDVTDAMLQDTFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGD 245
Query: 110 RENAEEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 246 ENERTRAMTEMNGVYCSSRPMRI 268
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 91/103 (88%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GGYASNG+ G QS+GDSSNTTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP G
Sbjct: 219 VILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAG 278
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQF++R +A+EA+ KL+G +IGKQ+VRLSWGR+PANKQ
Sbjct: 279 KGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 321
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 117
N TI++G L + + L FS GE+ SVKI K GFV+F AE+ L
Sbjct: 32 NKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 91
Query: 118 HKLNGTVI--GKQSVRLSW 134
NGT++ +Q RL+W
Sbjct: 92 QSYNGTMMPNAEQPFRLNW 110
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD LR F S++ + K+ V KG GFV+F +
Sbjct: 124 SDFSIFVGDLASDVTDTMLRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSR 183
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 184 AMTEMNGIYCSSRPMRV 200
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 90/103 (87%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GGYASNGA G QS+GDSSNTTIFVGGLD VTDE+LRQ F+Q+GE+ SVKIP G
Sbjct: 270 VILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAG 329
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQF++R +A+EA+ KL+G +IGKQ+VRLSWGR+PANKQ
Sbjct: 330 KGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 372
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 117
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 83 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 142
Query: 118 HKLNGTVI--GKQSVRLSW 134
NGT++ +Q RL+W
Sbjct: 143 QSYNGTMMPNTEQPFRLNW 161
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 175 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 234
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG +++R+
Sbjct: 235 AMTEMNGVYCSSRAMRI 251
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 91/103 (88%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GGYASNGA G QS+GD+SNTTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP G
Sbjct: 324 VILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAG 383
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQF++R +A+EA+ KL+G +IGKQ+VRLSWGR+PANKQ
Sbjct: 384 KGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 426
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 117
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 137 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 196
Query: 118 HKLNGTVI--GKQSVRLSW 134
NGT++ +Q RL+W
Sbjct: 197 QSYNGTMMPNAEQPFRLNW 215
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 229 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 288
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG +++R+
Sbjct: 289 AMTEMNGVYCSSRAMRI 305
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 104
G SNG P Q S+ DS+NTTIFVGGLDP+ T EDLRQPFSQYGEI SVKIPVGKGCGF
Sbjct: 275 GGQSNGTPSQ---SDTDSTNTTIFVGGLDPSATAEDLRQPFSQYGEIVSVKIPVGKGCGF 331
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
VQFANR NAEEAL KLNGT +GKQ+VRLSWGRNPANKQ
Sbjct: 332 VQFANRNNAEEALQKLNGTTVGKQTVRLSWGRNPANKQ 369
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L +VTD L + FS +Y + + K+ KG GFV+F + +A
Sbjct: 186 DLSIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKA 245
Query: 117 LHKLNGTVIGKQSVRL 132
L+++NG +++R+
Sbjct: 246 LNEMNGVFCSSRAMRI 261
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEE 115
+ N T++VG L + + L + F+ GEI S+K+ K G GFV+F + AE+
Sbjct: 90 ADNKTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEK 149
Query: 116 ALHKLNGTVI--GKQSVRLSW 134
L G ++ +Q RL+W
Sbjct: 150 VLQTYAGMLMPNTEQPFRLNW 170
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 80/90 (88%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
G QSE DS+NTTIFVGGLDPNVT EDL+QPFSQYGEI SVKIPVGKGCGFVQFANR N
Sbjct: 266 GTSSQSEADSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRNN 325
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
AEEAL KLNGT IGKQ VRLSWGR+PANKQ
Sbjct: 326 AEEALQKLNGTTIGKQMVRLSWGRSPANKQ 355
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEE 115
+ N T++VG L + + L + F+ GEI+S+K+ + +G GFV+F + A++
Sbjct: 77 AENKTVWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADK 136
Query: 116 ALHKLNGTVI--GKQSVRLSW 134
L G ++ +Q RL+W
Sbjct: 137 VLQNYAGILMPNTEQPFRLNW 157
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L +VTD L + F+ +Y + + K+ KG GFV+F + +A
Sbjct: 172 DLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQA 231
Query: 117 LHKLNGTVIGKQSVRL 132
+ ++NG + +R+
Sbjct: 232 MTEMNGVYCSSRPMRI 247
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/93 (83%), Positives = 82/93 (88%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
G QSE DS+NTTIFVGGLD NVTDEDL+Q FSQYGEIASVKIPVGKGCGFVQFANR N
Sbjct: 283 GTSSQSEADSTNTTIFVGGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCGFVQFANRNN 342
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
AEEAL KLNGT+IGKQ+VRLSWGRNPA KQ L
Sbjct: 343 AEEALQKLNGTMIGKQTVRLSWGRNPAYKQFRL 375
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N T+++G L + + L + F+ GEI SVK+ + +G GF +F + AE+ L
Sbjct: 96 NKTLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVL 155
Query: 118 HKLNGTVI--GKQSVRLSW 134
G ++ Q+ RL+W
Sbjct: 156 QNYAGILMPNADQAFRLNW 174
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQF 107
G + + ++ +IFVG L +VTD L + FS Y + + K+ KG GFV+F
Sbjct: 180 GDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRF 239
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 240 GDESERSQAMTQMNGVYCSSRPMRI 264
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 92/110 (83%)
Query: 33 QFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA 92
Q++ +++ GG SNGA QG QSEGDS+NTTIFVGGLD +++DEDLRQPF Q+G++
Sbjct: 302 QYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVI 361
Query: 93 SVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
SVKIPVGKGCGFVQ A+R+NAEEA+ LNGTVIGKQ+VRLSWGR+P NK
Sbjct: 362 SVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 411
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
TI++G L + + L F+ GE+AS K+ K G GFV+F R AE+ L
Sbjct: 117 TIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQN 176
Query: 120 LNGTVI--GKQSVRLSW 134
NGT++ Q+ RL+W
Sbjct: 177 FNGTMMPNTDQAFRLNW 193
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 98
+++ G G+ SE +S+ ++FVG L +VTD L++ F S++ I K+ +
Sbjct: 196 FSAAGGGGERRSSEA-TSDLSVFVGDLAIDVTDAMLQETFASKFSSIKGAKVVIDSNTGR 254
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132
KG GFV+F + A+ ++NG + +R+
Sbjct: 255 SKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRV 288
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 92/110 (83%)
Query: 33 QFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA 92
Q++ +++ GG SNGA QG QSEGDS+NTTIFVGGLD +++DEDLRQPF Q+G++
Sbjct: 302 QYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVI 361
Query: 93 SVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
SVKIPVGKGCGFVQ A+R+NAEEA+ LNGTVIGKQ+VRLSWGR+P NK
Sbjct: 362 SVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 411
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
TI++G L + + L F+ GE+AS K+ K G GFV+F R AE+ L
Sbjct: 117 TIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQN 176
Query: 120 LNGTVI--GKQSVRLSW 134
NGT++ Q+ RL+W
Sbjct: 177 FNGTMMPNTDQAFRLNW 193
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 98
+++ G G+ SE +S+ ++FVG L +VTD L++ F S++ I K+ +
Sbjct: 196 FSAAGGGGERRSSEA-TSDLSVFVGDLAIDVTDAMLQETFASKFSSIKGAKVVIDSNTGR 254
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132
KG GFV+F + A+ ++NG + +R+
Sbjct: 255 SKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRV 288
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GG+ SNG+ G G QS+G+S+N TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVG
Sbjct: 296 VILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVG 355
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFA+R++AE+A+ LNGTVIGK +VRLSWGR+P NKQ
Sbjct: 356 KGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQ 397
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 117 LHKLNGTVIGKQSVRLSWG---RNPANKQ 142
L ++NG + +R+ R AN+Q
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQ 289
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 168
Query: 120 LNGTVI--GKQSVRLSWG 135
+G+V+ Q R++W
Sbjct: 169 YSGSVMPNSDQPFRINWA 186
>gi|165935740|gb|ABY75165.1| RNA binding protein [Arachis diogoi]
Length = 142
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/86 (89%), Positives = 80/86 (93%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
QSE DS+NTTIFVGGLDPNVTDEDLRQ FSQYGEI SVK+PVGKGCGFVQFA R NAEEA
Sbjct: 3 QSEADSTNTTIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGKGCGFVQFAIRNNAEEA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQ 142
L KLNGTVIGKQ+VRLSWGRNPANKQ
Sbjct: 63 LQKLNGTVIGKQTVRLSWGRNPANKQ 88
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GG+ SNG+ G G QS+G+S+N TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVG
Sbjct: 296 VILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVG 355
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFA+R++AE+A+ LNGTVIGK +VRLSWGR+P NKQ
Sbjct: 356 KGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQ 397
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 117 LHKLNGTVIGKQSVRL 132
L ++NG + +R+
Sbjct: 261 LTEMNGAYCSNRQMRV 276
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 168
Query: 120 LNGTVI--GKQSVRLSW 134
+G+V+ Q R++W
Sbjct: 169 YSGSVMPNSDQPFRINW 185
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GG+ SNG+ G G QS+G+S+N TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVG
Sbjct: 253 VILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVG 312
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFA+R++AE+A+ LNGTVIGK +VRLSWGR+P NKQ
Sbjct: 313 KGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQ 354
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 158 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 217
Query: 117 LHKLNGTVIGKQSVRL 132
L ++NG + +R+
Sbjct: 218 LTEMNGAYCSNRQMRV 233
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 66 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 125
Query: 120 LNGTVI--GKQSVRLSW 134
+G+V+ Q R++W
Sbjct: 126 YSGSVMPNSDQPFRINW 142
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 86/99 (86%), Gaps = 3/99 (3%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGY +GA +SEGD+ NTTIFVGGLD +VTDEDL+QPFS++GEI SVKIPVGKGCG
Sbjct: 288 GGYMPSGA---FTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCG 344
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQF NR NAEEAL KLNGTVIGKQ+VRLSWGRNPANKQ
Sbjct: 345 FVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQ 383
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 111
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 193 ENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 252
Query: 112 NAEEALHKLNGTVIGKQSVRL 132
+A+ ++NG +++R+
Sbjct: 253 ERTKAMTEMNGVKCSSRAMRI 273
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS--QYGEIASVKIPVGK------GCGF 104
G Q+ + N TI+VG L + + L F+ + EI S+K+ K G GF
Sbjct: 91 GNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGF 150
Query: 105 VQFANRENAEEALHKLNGTVI--GKQSVRLSW 134
V+F + + A++ L + NG + Q RL+W
Sbjct: 151 VEFESHDVADKVLQEFNGAPMPNTDQPFRLNW 182
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
L+L GG+ +NG+ G QS+G+S+N TIFVGG+D +VTDEDLRQPFSQ+GE+ SVKIPVG
Sbjct: 296 LILAGGHGANGSMAHGSQSDGESTNATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPVG 355
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQFA R++AE+A+ LNGTVIGK +VRLSWGR+P NKQ
Sbjct: 356 KGCGFVQFAERKSAEDAIETLNGTVIGKNTVRLSWGRSP-NKQ 397
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L P+VTD L + F +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSIFVGDLSPDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 117 LHKLNGTVIGKQSVRL 132
L ++NG + +R+
Sbjct: 261 LTEMNGAYCSNRQMRV 276
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS GE++SVK+ K G GF++F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQN 168
Query: 120 LNGTVI--GKQSVRLSW 134
+G+++ Q R++W
Sbjct: 169 YSGSLMPNSDQPFRINW 185
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GGYASNGA G QS+GD+SNTTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP G
Sbjct: 270 VILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAG 329
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQF++R +A+EA+ KL+G +IGKQ+VRLSWGR ANKQ
Sbjct: 330 KGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRT-ANKQ 371
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 117
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 83 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 142
Query: 118 HKLNGTVI--GKQSVRLSW 134
NGT++ +Q RL+W
Sbjct: 143 QSYNGTMMPNAEQPFRLNW 161
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 175 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 234
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG +++R+
Sbjct: 235 AMTEMNGVYCSSRAMRI 251
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 85/103 (82%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
++L GG+ASNGA Q Q++ D SNTT+FVGGLD VTDE+LRQ FSQ+G + SVKIP G
Sbjct: 271 VILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAG 330
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
KGCGFVQF+ R AE+A+ KLNGTVIG Q+VRLSWGRNPANKQ
Sbjct: 331 KGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPANKQ 373
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 117
N TI++G L + + L F+Q GE+ SVK+ K GF++F E AE+ L
Sbjct: 78 NRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVL 137
Query: 118 HKLNGTVI--GKQSVRLSW 134
NGT++ +Q RL+W
Sbjct: 138 QSYNGTMMPNAEQPFRLNW 156
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANREN 112
G S+ +IFVG L +VTD LR F S+Y + K+ + KG GFV+F +
Sbjct: 173 GSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESE 232
Query: 113 AEEALHKLNGTVIGKQSVRL 132
A+ ++NG +++R+
Sbjct: 233 RSRAMTEMNGIYCSSRAMRI 252
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/99 (76%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGY NG + EGD NTTIFVGGLD +VTDEDL+QPF+++GEI SVKIPVGKGCG
Sbjct: 286 GGYMPNGTLTR---PEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCG 342
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQF NR NAEEAL KLNGTVIGKQ+VRLSWGRNPANKQ
Sbjct: 343 FVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQ 381
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 111
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 191 ENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 250
Query: 112 NAEEALHKLNGTVIGKQSVRL 132
+A+ ++NG +++R+
Sbjct: 251 ERTKAMTEMNGVKCSSRAMRI 271
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKI------PVGKGCGFVQFA 108
Q+ + N TI+VG L + + L F+ E I SVK+ + +G GFV+F
Sbjct: 93 QNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFE 152
Query: 109 NRENAEEALHKLNGTVI--GKQSVRLSWG 135
+ + A++ L + NGT + Q RL+W
Sbjct: 153 SHDVADKVLREFNGTTMPNTDQPFRLNWA 181
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/99 (76%), Positives = 84/99 (84%), Gaps = 3/99 (3%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGY NGA + EGD+ NTTIFVGGLD +VTD+DLRQPFS++GEI SVKIPVGKGCG
Sbjct: 294 GGYMPNGALTR---PEGDTLNTTIFVGGLDSSVTDDDLRQPFSEFGEIVSVKIPVGKGCG 350
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQF NR +AEEAL KLNGTVIGKQ+VRLSWGRN ANKQ
Sbjct: 351 FVQFVNRPSAEEALEKLNGTVIGKQTVRLSWGRNQANKQ 389
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 111
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 199 ENNGPDLSIFVGDLAPDVSDTLLHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDEN 258
Query: 112 NAEEALHKLNGTVIGKQSVRL 132
+A+ ++NG +++R+
Sbjct: 259 ERTKAMTEMNGVKCSSRAMRI 279
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV--------GKGCGFVQF 107
Q+ + N TI+VG L + + L F S GEI V + V +G GFV+F
Sbjct: 100 QNASNGENKTIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEF 159
Query: 108 ANRENAEEALHKLNGTVI--GKQSVRLSWG 135
+ + A++ L + NGT + +Q RL+W
Sbjct: 160 DSHDVADKVLQEFNGTTMPDTEQPFRLNWA 189
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 83/99 (83%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GG+ASNGA Q Q++ D SNTT+FVGGLD +VTDE+LRQ FSQ+G + SVKIP GKGCG
Sbjct: 270 GGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCG 329
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
FVQF+ R AE+A+ KLNGTVIG Q+VRLSWGRNPANKQ
Sbjct: 330 FVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANKQ 368
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENA 113
G N TI++G L + + L F+Q GE+ SVK+ K GF++F E A
Sbjct: 74 GSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAA 133
Query: 114 EEALHKLNGTVI--GKQSVRLSW 134
E+ L NGT++ +Q RL+W
Sbjct: 134 EKVLQSYNGTMMPNAEQPFRLNW 156
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANREN 112
G S+ +IFVG L +VTD LR F S+Y + K+ + KG GFV+F +
Sbjct: 173 GSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESE 232
Query: 113 AEEALHKLNGTVIGKQSVRL 132
A+ ++NG +++R+
Sbjct: 233 RSRAMTEMNGIYCSSRAMRI 252
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
GGY SNG P QG Q + DS+NTTIFVGGLDPNV+DEDLRQPF QYGEI SVKIPV +
Sbjct: 303 GGY-SNGGPAQGSQPDADSTNTTIFVGGLDPNVSDEDLRQPFVQYGEIVSVKIPVEERVW 361
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
QFANR +AEEAL KLNGT IGKQ+VRL WGRNPANKQ+
Sbjct: 362 VWQFANRNDAEEALQKLNGTFIGKQTVRLFWGRNPANKQS 401
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 107
G + + S+ +IFVG L +VTD L + F ++Y + + K+ KG GFV+F
Sbjct: 200 GDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPSVKAAKVVFDANTGRSKGYGFVRF 259
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 260 GDDNERSQAMTEMNGVYCSSRPMRI 284
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 66 TIFVGGLDPNVTDED-LRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALH 118
TI+VG L N DED LR F+ E+AS+K+ K G GFV+F AE+ L
Sbjct: 118 TIWVGDL-LNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 119 KLNGTVIG--KQSVRLSW-----GRNPANKQASLSPFT 149
+ + Q RL+W G AN + LS F
Sbjct: 177 TYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFV 214
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
Query: 27 RNSSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS 86
+ S Y Q LVL GG+ NG QG QS+ +S+NTTIFVGGLD +V+DEDL+Q FS
Sbjct: 274 KASGYQQGYASQALVLAGGHP-NGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFS 332
Query: 87 QYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
++G++ SVKIP+GKGCGFVQFANR+NAE+A+ LNGTVIGKQ+VRLSWGR+ NKQ
Sbjct: 333 KFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQ 388
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 56 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 108
P+ +G + T+++G L P + + L F+ GE++SVK+ K G GFV+F
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 109 NRENAEEALHKLNGTVIGKQSV--RLSWGRNPANKQ 142
+ AE+ L NGT++ + RL+W AN +
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDR 185
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTD L++ FS +Y + K+ + KG GFV+F +
Sbjct: 191 SDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTR 250
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 251 AMTEMNGIYCSSRPMRI 267
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
Query: 27 RNSSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS 86
+ S Y Q LVL GG+ NG QG QS+ +S+NTTIFVGGLD +V+DEDL+Q FS
Sbjct: 273 KASGYQQGYASQALVLAGGHP-NGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFS 331
Query: 87 QYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
++G++ SVKIP+GKGCGFVQFANR+NAE+A+ LNGTVIGKQ+VRLSWGR+ NKQ
Sbjct: 332 KFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQ 387
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 56 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 108
P+ +G + T+++G L P + + L F+ GE++SVK+ K G GFV+F
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 109 NRENAEEALHKLNGTVIGKQSV--RLSWGRNPANKQ 142
+ AE+ L NGT++ + RL+W AN +
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDR 185
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 82/95 (86%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 107
++G G +S+GD +NTT+FVGGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF
Sbjct: 162 TSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQF 221
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
R+NAE+AL LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 222 VQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQ 256
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 74 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 133
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 134 HAMTEMNGVYCSTRPMRI 151
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 92/139 (66%), Gaps = 7/139 (5%)
Query: 6 HCCERKGEREERTLLYKLCFHRNSSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNT 65
+CC R E T L + SY + G A GQG QS+ D +NT
Sbjct: 211 YCCSRPMRINEATPKKSLGLQQ--SYSMKGNYYTQAYGGAVA-----GQGFQSDNDPNNT 263
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 125
TIFVGGLDPN TDEDLRQ F +GEI VKIPVGKGCGFVQF NR +AEEAL KL+GT+I
Sbjct: 264 TIFVGGLDPNATDEDLRQVFGPFGEIVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGTII 323
Query: 126 GKQSVRLSWGRNPANKQAS 144
G+QS+RLSWGR+PANKQ +
Sbjct: 324 GQQSIRLSWGRSPANKQTA 342
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 118
+IFVG L P V D L++ F S+Y + S K+ + KG GFV+F + A+
Sbjct: 146 SIFVGDLGPEVIDILLQETFQSRYSSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMT 205
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R++
Sbjct: 206 EMNGVYCCSRPMRIN 220
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIA-SVKIPVGK------GCGFVQFANRENAEEALH 118
T++VG L + + L+ FS GE+ SVKI K G GFV+ +R +AE L
Sbjct: 52 TLWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGFVELDSRASAERILQ 111
Query: 119 KLNGTVI--GKQSVRLSW 134
L+GT + RL+W
Sbjct: 112 TLHGTPMPNSPHPFRLNW 129
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 82/95 (86%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 107
++G G +S+GD +NTT+FVGGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF
Sbjct: 168 TSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQF 227
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
R+NAE+AL LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 228 VQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQ 262
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 80 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 139
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 140 HAMTEMNGVYCSTRPMRI 157
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 82/95 (86%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 107
++G G +S+GD +NTT+FVGGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF
Sbjct: 197 TSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQF 256
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
R+NAE+AL LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 257 VQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQ 291
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 109 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 168
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 169 HAMTEMNGVYCSTRPMRI 186
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 117
N TI+VG L + + L F GE+ ++K+ K G GFV+F + AE+ L
Sbjct: 18 NKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVL 77
Query: 118 HKLNGTVI--GKQSVRLSW 134
G ++ Q R++W
Sbjct: 78 EGFAGHIMPNTDQPFRINW 96
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 82/95 (86%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 107
++G G +S+GD +NTT+FVGGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF
Sbjct: 229 TSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQF 288
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
R+NAE+AL LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 289 VQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQ 323
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 141 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 200
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 201 HAMTEMNGVYCSTRPMRI 218
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 82/95 (86%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 107
++G G +S+GD +NTT+FVGGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF
Sbjct: 293 TSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQF 352
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
R+NAE+AL LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 353 VQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQ 387
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 205 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 264
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 265 HAMTEMNGVYCSTRPMRI 282
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
P+ G N TI+VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 106 PRGGGQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 165
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
AE+ L G ++ Q R++W
Sbjct: 166 HAAAEKVLEGFAGHIMPNTDQPFRINW 192
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 92/116 (79%), Gaps = 6/116 (5%)
Query: 27 RNSSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS 86
R ++Y Q N L L GG+ NG+ S+G+S+N+TIFVGGLD +VT+EDL QPFS
Sbjct: 299 RAAAYGQQNGSQALTLAGGHGGNGS-----LSDGESNNSTIFVGGLDADVTEEDLMQPFS 353
Query: 87 QYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
Q+GE+ SVKIPVGKGCGFVQFANR++AEEA+ LNGTVIGK +VRLSWGR+P NKQ
Sbjct: 354 QFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQ 408
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 125 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 184
Query: 120 LNGTVI--GKQSVRLSW 134
+G + +Q RL+W
Sbjct: 185 FSGVTMPNAEQPFRLNW 201
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A+
Sbjct: 219 SIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMT 278
Query: 119 KLNGTVIGKQSVRL 132
++NG + +R+
Sbjct: 279 EMNGAFCSSRQMRV 292
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 91/116 (78%), Gaps = 6/116 (5%)
Query: 27 RNSSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS 86
R ++Y Q N L L GG+ NG+ S+G+S+N+TIFVGGLD +VT+EDL QPFS
Sbjct: 294 RAAAYGQQNGSQALTLAGGHGGNGS-----MSDGESNNSTIFVGGLDADVTEEDLMQPFS 348
Query: 87 QYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
+GE+ SVKIPVGKGCGFVQFANR++AEEA+ LNGTVIGK +VRLSWGR+P NKQ
Sbjct: 349 DFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQ 403
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 120 LNGTVI--GKQSVRLSW 134
+G + +Q RL+W
Sbjct: 180 FSGVTMPNAEQPFRLNW 196
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A+
Sbjct: 214 SIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMT 273
Query: 119 KLNGTVIGKQSVRL 132
++NG + +R+
Sbjct: 274 EMNGAFCSSRQMRV 287
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 76/83 (91%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
GD +NTT+FVGGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL
Sbjct: 283 GDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQG 342
Query: 120 LNGTVIGKQSVRLSWGRNPANKQ 142
LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 343 LNGSTIGKQAVRLSWGRNPANKQ 365
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCG 103
G+P P G N TI+VG L + + L F GE+ ++K+ K G G
Sbjct: 79 GSPA--PHQAGQEENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYG 136
Query: 104 FVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 135
FV+F + AE L +G ++ Q RL+W
Sbjct: 137 FVEFYSHAAAERVLEGFSGHIMPNTDQPFRLNWA 170
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 182 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 241
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 242 HAMTEMNGVYCSSRPMRI 259
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 78/86 (90%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+S+GD +NTT+FVGGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+A
Sbjct: 291 RSDGDLTNTTVFVGGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDA 350
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQ 142
L LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 351 LQGLNGSTIGKQTVRLSWGRNPANKQ 376
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 194 ASDHSIFVGDLASDVNDATLLEIFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 253
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 254 HAMTEMNGVYCSTRPMRI 271
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 113
G N TI+VG L + + L F GE+ ++K+ K G GFV+F + A
Sbjct: 99 GQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAA 158
Query: 114 EEALHKLNGTVI--GKQSVRLSW 134
E+ L G ++ Q R++W
Sbjct: 159 EKVLDGFAGHIMPNTDQPFRINW 181
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 87/111 (78%), Gaps = 6/111 (5%)
Query: 32 CQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 91
C I L L GG+ NG+ S+G+S+N+TIFVGGLD +VT+EDL QPFS +GE+
Sbjct: 322 CNVFIGLALTLAGGHGGNGS-----MSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEV 376
Query: 92 ASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
SVKIPVGKGCGFVQFANR++AEEA+ LNGTVIGK +VRLSWGR+P NKQ
Sbjct: 377 VSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQ 426
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 120 LNGTVI--GKQSVRLSW 134
+G + +Q RL+W
Sbjct: 180 FSGVTMPNAEQPFRLNW 196
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A
Sbjct: 212 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 271
Query: 117 LHKLNGTVIGKQSVRL 132
+ ++NG + +R+
Sbjct: 272 MTEMNGAFCSSRQMRV 287
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 76/83 (91%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
GD +NTT+FVGGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL
Sbjct: 181 GDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQG 240
Query: 120 LNGTVIGKQSVRLSWGRNPANKQ 142
LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 241 LNGSTIGKQNVRLSWGRNPANKQ 263
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 107
G + +S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F
Sbjct: 73 GDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRF 132
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ +A+ ++NG + +R+
Sbjct: 133 GDDSEKTQAMTEMNGVYCSSRPMRI 157
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 76/83 (91%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
GD +NTT+FVGGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL
Sbjct: 297 GDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQG 356
Query: 120 LNGTVIGKQSVRLSWGRNPANKQ 142
LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 357 LNGSTIGKQNVRLSWGRNPANKQ 379
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 196 ASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 255
Query: 115 EALHKLNGTVIGKQSVRL 132
+A+ ++NG + +R+
Sbjct: 256 QAMTEMNGVYCSSRPMRI 273
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
P G N +++VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 97 PHQPGQEENKSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 156
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
AE+ L +G ++ Q RL+W
Sbjct: 157 HAAAEKVLEGFSGHIMPNTDQPFRLNW 183
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 76/83 (91%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
GD +NTT+FVGGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL
Sbjct: 294 GDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQG 353
Query: 120 LNGTVIGKQSVRLSWGRNPANKQ 142
LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 354 LNGSTIGKQNVRLSWGRNPANKQ 376
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 193 ASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 252
Query: 115 EALHKLNGTVIGKQSVRL 132
+A+ ++NG + +R+
Sbjct: 253 QAMTEMNGVYCSSRPMRI 270
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
P G N +++VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 94 PHQPGQEENKSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 153
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
AE+ L +G ++ Q RL+W
Sbjct: 154 HAAAEKVLEGFSGHIMPNTDQPFRLNW 180
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 76/83 (91%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
GD +NTT+FVGGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL
Sbjct: 283 GDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQG 342
Query: 120 LNGTVIGKQSVRLSWGRNPANKQ 142
LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 343 LNGSTIGKQAVRLSWGRNPANKQ 365
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
P G N TI+VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 83 PHQAGQEENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 142
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
AE L +G ++ Q RL+W
Sbjct: 143 HAAAERVLEGFSGHIMPNTDQPFRLNW 169
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 182 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 241
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 242 HAMTEMNGVYCSSRPMRI 259
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 76/83 (91%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
GD +NTT+FVGGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL
Sbjct: 181 GDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQG 240
Query: 120 LNGTVIGKQSVRLSWGRNPANKQ 142
LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 241 LNGSTIGKQAVRLSWGRNPANKQ 263
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 80 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 139
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 140 HAMTEMNGVYCSSRPMRI 157
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 78/86 (90%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+S+GD +NTT+FVGGLDPNV+++DL+Q FSQYGEI+SVKIPVGK CGFVQF R+NAE+A
Sbjct: 340 RSDGDLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDA 399
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQ 142
L LNG+ IGKQ+VRLSWGRNPANKQ
Sbjct: 400 LQGLNGSTIGKQTVRLSWGRNPANKQ 425
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 243 ASDHSIFVGDLASDVNDTALLETFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 302
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 303 NAMTEMNGVYCSTRPMRI 320
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 41 VLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 100
V +G A PGQ N TI+VG L + + L F GE+ ++K+ K
Sbjct: 136 VAMGSPAPAAQPGQ-------EENKTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNK 188
Query: 101 ------GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 134
G GFV+F + AE+ L G ++ Q R++W
Sbjct: 189 QTGQSEGYGFVEFYSHAAAEKVLDGFAGHIMPNTDQPFRINW 230
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 75/90 (83%), Gaps = 4/90 (4%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR----EN 112
QSE DS+NTTIFVGGLD NVT EDL+QPFSQYGEI SVKIPVGKGCGF +R +N
Sbjct: 268 QSEADSTNTTIFVGGLDSNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFTICNSRSPGPKN 327
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
AEEAL KLNGT IGKQ VRLSWGRNPANKQ
Sbjct: 328 AEEALQKLNGTTIGKQMVRLSWGRNPANKQ 357
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 105
G G + + + +IFVG L +VTD L + FS +Y + + K+ KG GFV
Sbjct: 159 GTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFV 218
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRL 132
+F + + +A+ ++NG + +R+
Sbjct: 219 RFGDDDERSQAMTEMNGVYCSSRPMRI 245
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEE 115
+ N T++VG L + + L + F+ GEI+S+K+ + +G GFV+F + AE+
Sbjct: 75 AENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEK 134
Query: 116 ALHKLNGTVI--GKQSVRLSW 134
L G ++ +Q RL+W
Sbjct: 135 VLQNYAGILMPNTEQPFRLNW 155
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 79/97 (81%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 104
G + G+ QG S+ D +NTTIFVG LDPN TDEDLRQ F QYGE+ SVKIPVGKGCGF
Sbjct: 276 GRGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGF 335
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
VQF NR +AEEAL +L+GTVI +Q+VRLSWGR+PANK
Sbjct: 336 VQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSPANK 372
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG LD +V+D L++ F S+Y + + K+ + KG GFV+F A+
Sbjct: 186 SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMT 245
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 246 EMNGVYCSTRPMRIS 260
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
PQS + T++VG L + + L FS GE+ S KI K G GF++F
Sbjct: 85 PQSSDEVK--TLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFIT 142
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
R AE+ + NGT++ +Q R++W
Sbjct: 143 RTAAEKIMQTYNGTLMPNTEQVFRMNW 169
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Query: 45 GYASNGAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
G A NG QG S+ D +NTTIFVG LDPN TDEDLRQ F QYGE+ SVKIPVGKGCG
Sbjct: 276 GRAGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCG 335
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
FVQF NR +AEEAL +L+GTVI +Q+VRLSWGR+PANK
Sbjct: 336 FVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSPANK 373
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG LD +V+D L++ F S+Y + + K+ + KG GFV+F A+
Sbjct: 186 SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMT 245
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 246 EMNGVYCSTRPMRIS 260
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
PQS + T++VG L + + L FS GE+ S KI K G GF++F
Sbjct: 85 PQSSDEVK--TLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFIT 142
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
R AE+ + NGT++ +Q R++W
Sbjct: 143 RTAAEKIMQTYNGTLMPNTEQVFRMNW 169
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 76/94 (80%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q+E D +NTTIFVG LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQFA+R A
Sbjct: 258 QGSQNENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCA 317
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
EEAL LNGT++G Q+VRLSWGR+P+NKQA P
Sbjct: 318 EEALRVLNGTLLGGQNVRLSWGRSPSNKQAQADP 351
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L F+ GE+ SVK+ K G GF++F +R AE L
Sbjct: 67 TLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQT 126
Query: 120 LNGTVI--GKQSVRLSWG 135
NG ++ G QS RL+W
Sbjct: 127 YNGAIMPNGGQSFRLNWA 144
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 113
DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F++
Sbjct: 156 DSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQ 215
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++ G + + +R+
Sbjct: 216 VRAMTEMQGVLCSTRPMRI 234
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 91/131 (69%), Gaps = 10/131 (7%)
Query: 19 LLYKLCFHRNSSYCQFNIVFLLVLIGGYASNGA------PGQGPQSEGDSSNTTIFVGGL 72
LY + + N+S F +F V +G +ASN QG Q E D +NTTIFVGGL
Sbjct: 4 FLYTITVYLNTS---FPFLFW-VPVGNFASNFQLFSSFQNTQGNQGESDPNNTTIFVGGL 59
Query: 73 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132
D NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR AE+AL LNGT +G QS+RL
Sbjct: 60 DSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRL 119
Query: 133 SWGRNPANKQA 143
SWGR+P+NKQA
Sbjct: 120 SWGRSPSNKQA 130
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 76/94 (80%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q+E D +NTTIFVG LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQFA+R A
Sbjct: 259 QGSQNENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCA 318
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
EEAL LNGT++G Q+VRLSWGR+P+NKQA P
Sbjct: 319 EEALRVLNGTLLGGQNVRLSWGRSPSNKQAQADP 352
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L F+ GE++SVK+ K G GF++F +R AE L
Sbjct: 68 TLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQT 127
Query: 120 LNGTVI--GKQSVRLSWG 135
NG ++ G QS RL+W
Sbjct: 128 YNGAIMPNGGQSFRLNWA 145
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRE 111
+ DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F+
Sbjct: 155 QDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEES 214
Query: 112 NAEEALHKLNGTVIGKQSVRL 132
A+ ++ G + + +R+
Sbjct: 215 EQMRAMTEMQGVLCSTRPMRI 235
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 78/101 (77%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
AS P G Q+E D +NTTIFVG LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQ
Sbjct: 256 ASYQNPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQ 315
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
FA+R +AEEAL LNGT++G Q+VRLSWGR+PANKQ P
Sbjct: 316 FADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDP 356
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 46 YASNGAPGQ----GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK- 100
+A N P Q P S D T +++G L + + L FS GE+ SVK+ K
Sbjct: 52 WAPNAQPPQQSAVPPPSSADEVKT-LWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 101 -----GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 134
G GF++F +R AE L NGT++ G Q+ RL+W
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNW 151
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 107
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 157 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
A+ A+ ++ G + + +R+
Sbjct: 217 ADESEQMRAMTEMQGVLCSTRPMRI 241
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 78/101 (77%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
AS P G Q+E D +NTTIFVG LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQ
Sbjct: 256 ASYQNPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQ 315
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
FA+R +AEEAL LNGT++G Q+VRLSWGR+PANKQ P
Sbjct: 316 FADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDP 356
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 46 YASNGAPGQ----GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK- 100
+A N P Q P S D T +++G L + + L FS GE+ SVK+ K
Sbjct: 52 WAPNAQPPQQSAVPPPSSADEVET-LWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 101 -----GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 134
G GF++F +R AE L NGT++ G Q+ RL+W
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNW 151
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 107
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 157 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
A+ A+ ++ G + + +R+
Sbjct: 217 ADESEQMRAMTEMQGVLCSTRPMRI 241
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 78/101 (77%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
AS P G Q+E D +NTTIFVG LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQ
Sbjct: 254 ASYQNPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQ 313
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
FA+R +AEEAL LNGT++G Q+VRLSWGR+PANKQ P
Sbjct: 314 FADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDP 354
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L FS GE+ SVK+ K G GF++F +R AE L
Sbjct: 73 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKLNNQSEGYGFLEFISRAGAERVLQT 132
Query: 120 LNGTVI--GKQSVRLSW 134
NGT++ G Q+ RL+W
Sbjct: 133 YNGTIMPNGGQNFRLNW 149
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 107
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 155 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRF 214
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
A+ A+ ++ G + + +R+
Sbjct: 215 ADESEQMRAMTEMQGVLCSTRPMRI 239
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 82/114 (71%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
A+ P Q S+ D +NTTIFVGGLDP+VTDE LRQ F Q+GE+ VKIPVGK CGFVQ
Sbjct: 264 AAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQ 323
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEYN 160
F NR +AEEAL L+GTV+G+Q++RLSWGR+PANKQ + Q ++N
Sbjct: 324 FNNRASAEEALQMLHGTVLGQQAIRLSWGRSPANKQVQTPGWVQPQQPDPNQWN 377
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHK 119
IFVG L +VTD L++ F S+Y + K+ KG GFV+F + A+ +
Sbjct: 174 IFVGDLASDVTDYLLQETFRSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTE 233
Query: 120 LNGTVIGKQSVR 131
+NG + +R
Sbjct: 234 MNGMFCSSRPMR 245
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + ++ F E+ SVKI K G GFV+FA+ AE L
Sbjct: 80 TLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGAERFLQN 139
Query: 120 LNGTVI--GKQSVRLSWG 135
NG + +Q RL+W
Sbjct: 140 HNGAQMPNTEQFYRLNWA 157
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 77/87 (88%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
QS+ DS+N TI+VGGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEA
Sbjct: 123 QSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEA 182
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG+ IGKQ+VRLSWGR+PA+KQ+
Sbjct: 183 LQGLNGSTIGKQAVRLSWGRSPASKQS 209
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L F++ Y + K+ + +G GFV+F + +
Sbjct: 27 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 86
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 87 HAMTEMNGAYCSTRPIRI 104
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 81/102 (79%)
Query: 42 LIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 101
+ G Y + QS+ DS+N TI+VGGLDPN T+++LR+ F++YG++ASVKIPVGK
Sbjct: 308 IWGEYVGDSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQ 367
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
CGFVQF NR +AEEAL LNG+ IGKQ+VRLSWGR+PA+KQ+
Sbjct: 368 CGFVQFVNRPDAEEALQGLNGSTIGKQAVRLSWGRSPASKQS 409
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L F++ Y + K+ + +G GFV+F + +
Sbjct: 205 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 264
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 265 HAMTEMNGAYCSTRPIRI 282
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 77/87 (88%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
QS+ DS+N TI+VGGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEA
Sbjct: 176 QSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEA 235
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG+ IGKQ+VRLSWGR+PA+KQ+
Sbjct: 236 LQGLNGSTIGKQAVRLSWGRSPASKQS 262
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L F++ Y + K+ + +G GFV+F + +
Sbjct: 80 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 139
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 140 HAMTEMNGAYCSTRPIRI 157
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 74/90 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q E D +NTTIFVGGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR A
Sbjct: 259 QGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACA 318
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
E+AL LNGT +G QS+RLSWGR+P+NKQA
Sbjct: 319 EQALAGLNGTQLGAQSIRLSWGRSPSNKQA 348
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
PQ+ ++++G L P + + FSQ GE+ SVK+ K G GF++ A
Sbjct: 66 PQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 125
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
R AE L NGT++ +Q+ RL+W
Sbjct: 126 RAAAERILQTYNGTLMPNSEQNFRLNW 152
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 105
G G + D+ + TIFVG L +VTD L++ F Y + K+ KG GFV
Sbjct: 156 GAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFV 215
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRL 132
+F + A++++NG + +R+
Sbjct: 216 RFGDEGEQLRAMNEMNGMFCSTRPMRI 242
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 77/87 (88%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
QS+ DS+N TI+VGGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEA
Sbjct: 260 QSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEA 319
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG+ IGKQ+VRLSWGR+PA+KQ+
Sbjct: 320 LQGLNGSTIGKQAVRLSWGRSPASKQS 346
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L F++ Y + K+ + +G GFV+F + +
Sbjct: 164 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 223
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 224 HAMTEMNGAYCSTRPIRI 241
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 74/90 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q E D +NTTIFVGGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR A
Sbjct: 280 QGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACA 339
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
E+AL LNGT +G QS+RLSWGR+P+NKQA
Sbjct: 340 EQALAGLNGTQLGAQSIRLSWGRSPSNKQA 369
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
PQ+ ++++G L P + + L FSQ GE+ SVK+ K G GF++ A
Sbjct: 81 PQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 140
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
R AE L NGT++ +Q+ RL+W
Sbjct: 141 RAAAERILQTYNGTLMPNSEQNFRLNW 167
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 105
G G + D+ + TIFVG L +VTD L++ F Y + K+ KG GFV
Sbjct: 171 GAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFV 230
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRL 132
+F + A++++NG + +R+
Sbjct: 231 RFGDEGEQLRAMNEMNGMFCSTRPMRI 257
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 82/97 (84%), Gaps = 2/97 (2%)
Query: 48 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 105
++G G P QS+GD +N T++VGGLDPNV++++LR+ F++YG++ASVKIPVGK CGFV
Sbjct: 274 TSGDSGSSPPRQSDGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFV 333
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
QF NR +AEEAL L+G+ IGKQ+VRLSWGR+PA+KQ
Sbjct: 334 QFVNRADAEEALQALSGSTIGKQAVRLSWGRSPASKQ 370
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTD+ L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDRT 248
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 249 HAMTEMNGVYCSTRPIRI 266
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 100 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 159
Query: 120 LNGTVI--GKQSVRLSW 134
G V+ ++ +L+W
Sbjct: 160 FAGHVMPNTDRAFKLNW 176
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 80/87 (91%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDSSN T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQFA+R +AEEA
Sbjct: 287 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCGFVQFASRTDAEEA 346
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG++IGKQ+VRLSWGR+P++KQ+
Sbjct: 347 LQGLNGSLIGKQAVRLSWGRSPSHKQS 373
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 191 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 250
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 251 HAMSEMNGVYCSTRPIRI 268
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 105
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 88 PAAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFV 147
Query: 106 QFANRENAEEALHKLNGTVI--GKQSVRLSW 134
+F + +AE+AL G V+ ++ +L+W
Sbjct: 148 EFFSHASAEKALQNFTGHVMPNTDRAFKLNW 178
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 74/90 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q+E D +NTTIFVG LDPNVTD+ LRQ F QYGE+ VKIP GK CGFVQFA+R A
Sbjct: 254 QGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCA 313
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
EEAL LNGT++G Q+VRLSWGR+P+NKQA
Sbjct: 314 EEALRVLNGTLLGGQNVRLSWGRSPSNKQA 343
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
PQ T+++G L + + L F+ GE+ASVK+ K G GF++F +
Sbjct: 56 PQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTS 115
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
R AE L NGT++ G Q+ RL+W
Sbjct: 116 RAGAERVLQTYNGTIMPNGGQNFRLNW 142
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 107
G + DS + TIFVG L +VTD L++ F ++Y K+ + KG GFV+F
Sbjct: 148 GERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRF 207
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ A+ ++ G + + +R+
Sbjct: 208 GDESEQVRAMSEMQGVLCSTRPMRI 232
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 79/87 (90%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 237 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 296
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG+VIGKQ+VRLSWGR+P++KQ+
Sbjct: 297 LQGLNGSVIGKQAVRLSWGRSPSHKQS 323
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 141 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 200
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 201 HAMTEMNGAYCSTRPIRI 218
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 74/93 (79%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
G QSE D +NTTIFVG LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQF++R +AE
Sbjct: 249 GGQSENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPSGKRCGFVQFSDRSSAE 308
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
EA+ LNGT++G Q+VRLSWGR P+NKQ P
Sbjct: 309 EAIRVLNGTLLGGQNVRLSWGRTPSNKQTQQDP 341
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 100
+A + P Q P S + T+++G L + + L F GE+ SVK+ K
Sbjct: 40 WAQSAQPPQQPASADEVR--TLWIGDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQTSQS 97
Query: 101 -GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQAS 144
G GF++F R +AE L G ++ G QS RL+W A +++S
Sbjct: 98 EGYGFIEFNTRASAERVLQTYQGAIMPNGGQSYRLNWATFSAGERSS 144
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRE 111
+ D + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+FA+
Sbjct: 146 QDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEG 205
Query: 112 NAEEALHKLNGTVIGKQSVRL--SWGRNPA 139
A+ ++ G + + +R+ + +NPA
Sbjct: 206 EQMRAMTEMQGVLCSTRPMRIGPATNKNPA 235
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 81/98 (82%), Gaps = 2/98 (2%)
Query: 48 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 105
S G G P QS DS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP GK CGFV
Sbjct: 279 SQGDSGTSPPRQSHVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFV 338
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
QF NR +AEEALH LNG+ IGKQ+VRLSWGR+PA+KQ+
Sbjct: 339 QFVNRVDAEEALHGLNGSTIGKQAVRLSWGRSPASKQS 376
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFA 108
G G N TI+VG L + + L F GE+ ++K+ V +G GF++F
Sbjct: 94 GSGGNGGEDNRTIWVGDLQYWMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFY 153
Query: 109 NRENAEEALHKLNGTVI--GKQSVRLSW 134
+AE+AL +G V+ ++ +L+W
Sbjct: 154 THVSAEKALQNFSGHVMPNTDRAFKLNW 181
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
SS+ +IFVG L +VTD L + FS +Y + K+ + +G GFV+F + +
Sbjct: 194 SSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKI 253
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 254 HAMTEMNGVYCSTRPIRV 271
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 79/87 (90%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 15 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 74
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG+VIGKQ+VRLSWGR+P++KQ+
Sbjct: 75 LQGLNGSVIGKQAVRLSWGRSPSHKQS 101
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 79/87 (90%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 290 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 349
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG+VIGKQ+VRLSWGR+P++KQ+
Sbjct: 350 LQGLNGSVIGKQAVRLSWGRSPSHKQS 376
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 194 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 253
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 254 HAMTEMNGAYCSTRPIRI 271
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 117
N TI+VG L + + L F GE+ ++K+ + G GFV+F + +AE+AL
Sbjct: 103 NKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKAL 162
Query: 118 HKLNGTVI--GKQSVRLSW 134
G V+ + +L+W
Sbjct: 163 QNFTGHVMPNTDRPFKLNW 181
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 79/87 (90%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 290 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 349
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG+VIGKQ+VRLSWGR+P++KQ+
Sbjct: 350 LQGLNGSVIGKQAVRLSWGRSPSHKQS 376
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 194 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 253
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 254 HAMTEMNGAYCSTRPIRI 271
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 117
N TI+VG L + + L F GE+ ++K+ + G GFV+F + +AE+AL
Sbjct: 103 NKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKAL 162
Query: 118 HKLNGTVI--GKQSVRLSW 134
G V+ + +L+W
Sbjct: 163 QNFTGHVMPNTDRPFKLNW 181
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 76/90 (84%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QS+ D SNTTIFVGGLDP+VTD+ L+Q F+ YG++ VKIPVGK CGFVQFANR +A
Sbjct: 173 QGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASA 232
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
+EAL L GT+IG Q+VRLSWGR+P+N+QA
Sbjct: 233 DEALVLLQGTLIGGQNVRLSWGRSPSNRQA 262
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 76 DTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQ 135
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
A+ ++NG V + +R+ ANK+A+
Sbjct: 136 ARAMTEMNGMVCSSRPMRIG---PAANKKAT 163
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 73/94 (77%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q+E D +NTTIFVG LD NVTDE LRQ F QYGE+ VKIPVGK CGFVQFA+R A
Sbjct: 254 QGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCA 313
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
EEAL LNGT IG Q++RLSWGR+P+NKQ P
Sbjct: 314 EEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADP 347
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 50 GAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GC 102
G+P GQ PQS T+++G L + + + F+ GE++SVK+ K G
Sbjct: 50 GSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGY 109
Query: 103 GFVQFANRENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQASLSPFT 149
GF++F R AE L NGT + G Q+ RL+W +Q +T
Sbjct: 110 GFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYT 158
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 107
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEY 159
+ A+ ++NG + +R+ ANK S QF K Y
Sbjct: 207 GDESEQMRAMTEMNGVHCSSRPMRIG---PAANKNTS-----GGQQFSKTSY 250
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
A + P Q QS+ D +NTTIFVGGLDP V+DEDLRQ F Q+GE+ VKIPV KGCGFVQ
Sbjct: 41 AYSAPPAQVFQSD-DQNNTTIFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQ 99
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
F NR AEEAL +++GTVIG+Q+VRLSWGR+PA KQ
Sbjct: 100 FGNRACAEEALQRVHGTVIGQQTVRLSWGRSPATKQ 135
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 79/87 (90%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 251 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 310
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG+VIGKQ+VRLSWGR+P++KQ+
Sbjct: 311 LQGLNGSVIGKQAVRLSWGRSPSHKQS 337
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 155 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 214
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 215 HAMTEMNGAYCSTRPIRI 232
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 117
N TI+VG L + + L F GE+ ++K+ + G GFV+F + +AE+AL
Sbjct: 64 NKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKAL 123
Query: 118 HKLNGTVI--GKQSVRLSW 134
G V+ + +L+W
Sbjct: 124 QNFTGHVMPNTDRPFKLNW 142
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 78/104 (75%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ D +NTTIFVGGLDP+VTDE LRQ F Q+GE+ VKIPVGK CGFVQF NR +AEEAL
Sbjct: 276 SDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEAL 335
Query: 118 HKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEYNA 161
L+GTV+G+Q++RLSWGR+PANKQ + Q ++N
Sbjct: 336 QMLHGTVLGQQAIRLSWGRSPANKQVQTPGWVQPQQPDPNQWNG 379
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + ++ F E+ SVKI K G GFV+FA+ AE L
Sbjct: 80 TLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGAERFLQN 139
Query: 120 LNGTVI--GKQSVRLSW 134
NG + +Q RL+W
Sbjct: 140 HNGAQMPNTEQFYRLNW 156
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHK 119
IFVG L +VTD L++ F S+Y + K+ KG GFV+F + A+ +
Sbjct: 174 IFVGDLASDVTDYLLQETFRSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTE 233
Query: 120 LNGTVIGKQSVR 131
+NG + +R
Sbjct: 234 MNGMFCSSRPMR 245
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 76/90 (84%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QS+ D SNTTIFVGGLDP+VTD+ L+Q F+ YG++ VKIPVGK CGFVQFANR +A
Sbjct: 278 QGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASA 337
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
+EAL L GT+IG Q+VRLSWGR+P+N+QA
Sbjct: 338 DEALVLLQGTLIGGQNVRLSWGRSPSNRQA 367
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 181 DTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQ 240
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
A+ ++NG V + +R+ ANK+A+
Sbjct: 241 ARAMTEMNGMVCSSRPMRIG---PAANKKAT 268
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + + F+ GE+ SVK+ K G GF++F + AE L
Sbjct: 96 TLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQT 155
Query: 120 LNGTVIG--KQSVRLSW 134
NG ++ +Q+ RL+W
Sbjct: 156 YNGAMMPNVEQTYRLNW 172
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QS+ D +NTTIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQF NR +A
Sbjct: 273 QGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVIHVKIPVGKRCGFVQFVNRPSA 332
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
E+AL L GT IG Q+VRLSWGR+P+NKQA P S+Q+
Sbjct: 333 EQALQMLQGTPIGGQNVRLSWGRSPSNKQA--QPQQESSQW 371
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 174 DTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQ 233
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 234 ARAMTEMNGMPCSSRPMRI 252
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 73/90 (81%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q+E D +NTTIFVG LDPNVTD+ LRQ F YGE+ VKIP GK CGFVQFA+R A
Sbjct: 250 QGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRCGFVQFADRSCA 309
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
EEAL LNGT++G Q+VRLSWGR+P+NKQA
Sbjct: 310 EEALRVLNGTLLGGQNVRLSWGRSPSNKQA 339
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 109
PQ T+++G L + + L + GE+ASVK+ K G GF++F +
Sbjct: 52 PQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTS 111
Query: 110 RENAEEALHKLNGTVI--GKQSVRLSW 134
R AE L NGT++ G Q+ RL+W
Sbjct: 112 RAGAERVLQTYNGTIMPNGGQNFRLNW 138
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 107
G + DS + TIFVG L +VTD L++ F ++Y I K+ + KG GFV+F
Sbjct: 144 GERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRF 203
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL 132
+ A+ ++ G + + +R+
Sbjct: 204 GDESEQVRAMTEMQGVLCSTRPMRI 228
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 73/94 (77%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q+E D +NTTIFVG LD NVTDE LRQ F QYGE+ VKIPVGK CGFVQFA+R A
Sbjct: 6 QGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCA 65
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
EEAL LNGT IG Q++RLSWGR+P+NKQ P
Sbjct: 66 EEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADP 99
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
Query: 48 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 105
S G G P QS+ DS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP GK CGFV
Sbjct: 284 SQGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFV 343
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
QF NR +AEEAL LNG IGKQ+VRLSWGR+PA+KQ+
Sbjct: 344 QFVNRADAEEALQGLNGATIGKQAVRLSWGRSPASKQS 381
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
SS+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 199 SSDHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 258
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 259 HAMTEMNGVYCSTRPIRV 276
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 108 NRTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKAL 167
Query: 118 HKLNGTVI--GKQSVRLSW 134
+G V+ ++ +L+W
Sbjct: 168 QNFSGHVMPNTDRAFKLNW 186
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 82/98 (83%), Gaps = 3/98 (3%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 104
G + + PG S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP GK CGF
Sbjct: 281 GDSGSSTPGH---SDGDSTNRTVYVGGLDPNVSEDELRKSFAKYGDVASVKIPQGKQCGF 337
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
VQ+ NR +AEEAL LNG+VIGKQ+VRLSWGR+P++KQ
Sbjct: 338 VQYVNRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQ 375
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L +VTDE L + F S+Y + K+ + +G GFV+F +
Sbjct: 195 SDHSIFVGDLAADVTDEMLMELFASKYRSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSR 254
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 255 AMTEMNGVYCSTRPIRI 271
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 75/89 (84%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QS+ D +NTTIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ANR +A
Sbjct: 278 QGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVGKRCGFVQYANRPSA 337
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL L GT++G Q+VRLSWGR+P+NKQ
Sbjct: 338 EQALQLLQGTLVGGQNVRLSWGRSPSNKQ 366
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 177 DTPDYTIFVGDLAADVTDYMLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQ 236
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 237 ARAMTEMNGMPCSSRPMRI 255
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + + F+ GE SVK+ K G GFV+FA+ AE L
Sbjct: 92 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 151
Query: 120 LNGTVIG--KQSVRLSW 134
NG ++ + + RL+W
Sbjct: 152 FNGQMMPNVELAYRLNW 168
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 104
G + + PG S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGF
Sbjct: 59 GDSGSSTPGH---SDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGF 115
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
VQ+ NR +A+EAL LNG+VIGKQ VRLSWGR+P++KQ+
Sbjct: 116 VQYVNRTDAKEALQGLNGSVIGKQVVRLSWGRSPSHKQS 154
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/72 (81%), Positives = 66/72 (91%)
Query: 71 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 130
GLD +VTD+DLRQPF+ YGEI SVKIPVGKGCGF+QF NRENAEEAL KLNG++IGKQ+V
Sbjct: 273 GLDSSVTDDDLRQPFAGYGEIVSVKIPVGKGCGFIQFVNRENAEEALEKLNGSMIGKQTV 332
Query: 131 RLSWGRNPANKQ 142
RLSWGRNP NKQ
Sbjct: 333 RLSWGRNPGNKQ 344
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANR 110
Q+ ++ N TI+VG L + + L FS GEI+SVK+ K G GFV+F +
Sbjct: 83 QNASNTENKTIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSH 142
Query: 111 ENAEEALHKLNGTVI--GKQSVRLSW 134
+ AE+ L +LNG + +Q RL+W
Sbjct: 143 DVAEKVLQELNGEAMLNAEQPFRLNW 168
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L P VTD L Q FS+ Y + + K+ + KG GFV+F + +A
Sbjct: 183 DLSIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKA 242
Query: 117 LHKLNGTVIGKQSVRL 132
+ ++NG +++R+
Sbjct: 243 MLEMNGVKCCGRAMRI 258
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 75/89 (84%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QS+ D SNTTIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R ++
Sbjct: 282 QGVQSDSDPSNTTIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRCGFVQYASRSSS 341
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEAL L GTVIG Q+VRLSWGR+P+NKQ
Sbjct: 342 EEALLMLQGTVIGGQNVRLSWGRSPSNKQ 370
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D + TIFVG L +VTD L++ F Y + K+ KG GFV+F++
Sbjct: 184 DGPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKLTMRSKGYGFVKFSDPTEQ 243
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
A+ ++NG V + +R+ ANKQ
Sbjct: 244 TRAMTEMNGMVCSSRPMRIG---PAANKQ 269
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + + F+ GE+ SVK+ K G GFV+F R AE L
Sbjct: 99 TLWIGDLQYWMDENYVYGCFAHTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERVLQT 158
Query: 120 LNGTVIG--KQSVRLSW 134
NG + + RL+W
Sbjct: 159 YNGATMPNVEMPYRLNW 175
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
Query: 48 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 105
S G G P QS+ DS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP GK CGFV
Sbjct: 268 SQGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFV 327
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
QF NR +AEEAL LNG+ IGKQ++RLSWGR+P +KQ+
Sbjct: 328 QFVNRVDAEEALQGLNGSTIGKQAIRLSWGRSPTSKQS 365
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + + A
Sbjct: 185 DHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTLA 244
Query: 117 LHKLNGTVIGKQSVRL 132
+ ++NG + +R+
Sbjct: 245 MTEMNGVYCSTRPIRV 260
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 94 TIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQN 153
Query: 120 LNGTVI--GKQSVRLSWGRNPANKQASLSP 147
+G V+ +++ +L+W ++ S P
Sbjct: 154 FSGHVMPNTERAFKLNWASYSMGEKRSEVP 183
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 84/103 (81%), Gaps = 3/103 (2%)
Query: 41 VLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 100
+L G + + PG S+GDS+N T++VGGLD NV++++LR+ F++YG++ASVKIP+GK
Sbjct: 1 LLTSGDSGSSTPGH---SDGDSNNRTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGK 57
Query: 101 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
CGFVQ+ NR +AEEAL LNG VIGKQ+VRLSWGR+P++KQ+
Sbjct: 58 QCGFVQYVNRTDAEEALQGLNGAVIGKQAVRLSWGRSPSHKQS 100
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QS+ D +NTTIFVGGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +A
Sbjct: 304 QGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSA 363
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
EEAL L GT++G Q+VRLSWGR+P+NKQ + P S Q+
Sbjct: 364 EEALVILQGTLVGGQNVRLSWGRSPSNKQ--VQPQQDSNQW 402
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK------GCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F + Y + K+ K G GFV+F +
Sbjct: 207 DTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQ 266
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
A+ ++NG + + +R+ ANK+A++
Sbjct: 267 ARAMTEMNGMLCSSRPMRIG---PAANKKATV 295
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 113
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 116 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 175
Query: 114 EEALHKLNGTVIGKQSV--RLSW 134
E L NGT++ + RL+W
Sbjct: 176 ERVLQTYNGTMMPNVELPFRLNW 198
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QS+ D +NTTIFVGGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +A
Sbjct: 294 QGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSA 353
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
EEAL L GT++G Q+VRLSWGR+P+NKQ + P S Q+
Sbjct: 354 EEALVILQGTLVGGQNVRLSWGRSPSNKQ--VQPQQDSNQW 392
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK------GCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F + Y + K+ K G GFV+F +
Sbjct: 197 DTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQ 256
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
A+ ++NG + + +R+ ANK+A++
Sbjct: 257 ARAMTEMNGMLCSSRPMRIG---PAANKKATV 285
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 113
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 106 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 165
Query: 114 EEALHKLNGTVIGKQSV--RLSW 134
E L NGT++ + RL+W
Sbjct: 166 ERVLQTYNGTMMPNVELPFRLNW 188
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 74/89 (83%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 263 QGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASA 322
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEA+ LNG+ +G QS+RLSWGR+PANKQ
Sbjct: 323 EEAIRMLNGSQLGGQSIRLSWGRSPANKQ 351
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 98
+A++GA G + D S+ TIFVG L +VTD L+ F S+Y + S K+
Sbjct: 149 WATSGA---GEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGR 205
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIE 158
KG GFV+FA+ + A+ ++NG + +RL N N P SST ++ +
Sbjct: 206 SKGYGFVKFADLDEQTRAMTEMNGQYCSSRPMRLGPASNKKNTGGQPQP--SSTIYQNTQ 263
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L FSQ GE+ SVKI K G GF++F N AE+ L
Sbjct: 73 TLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQVLQN 132
Query: 120 LNGTVIG--KQSVRLSWGRNPANKQ 142
NG ++ Q +L+W + A ++
Sbjct: 133 YNGQMMPNVNQPFKLNWATSGAGEK 157
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
Query: 33 QFNIVFLLVLIGGYASNGAPGQGPQ---SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYG 89
Q N V + YA+ GA PQ ++ D +NTTIFVGGLDP V DEDLR F Q+G
Sbjct: 223 QLNPKVSPVAVATYAAYGA-QPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFG 281
Query: 90 EIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
E+ VKIP GKGCGFVQF +R AEEAL +L+ TVIG Q+VRLSWGR+P NKQ S
Sbjct: 282 ELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTS 336
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F ++Y + K+ KG GFV+F + A+
Sbjct: 137 SIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMS 196
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSP 147
++NG + +R+S A + SL P
Sbjct: 197 EMNGIYCSSRPMRIS----AATPKKSLGP 221
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L F GE+ SVKI K G GFV+F + AE+ L
Sbjct: 44 TLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKILQA 103
Query: 120 LNGTVI--GKQSVRLSW 134
NGT + +Q RL+W
Sbjct: 104 YNGTQMPNTEQPFRLNW 120
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 73/89 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 22 QGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASA 81
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEA+ LNG+ +G QS+RLSWGR+P NKQ
Sbjct: 82 EEAIRMLNGSQLGGQSIRLSWGRSPGNKQ 110
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 74/89 (83%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 260 QGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASA 319
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEA+ LNG+ +G QS+RLSWGR+PANKQ
Sbjct: 320 EEAIRVLNGSQLGGQSIRLSWGRSPANKQ 348
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 98
+A++GA G + D S+ TIFVG L +VTD L+ F S+Y + K+
Sbjct: 147 WATSGA---GEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKGAKVVFDRTTGR 203
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA-NKQASLSPFTSSTQFKKI 157
KG GFV+FA+ + A+ ++NG +++RL PA NK+ + P SS ++
Sbjct: 204 SKGYGFVKFADSDEQTRAMTEMNGQYCSSRAMRLG----PASNKKNTGGPQPSSAIYQNT 259
Query: 158 E 158
+
Sbjct: 260 Q 260
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L FSQ GE+ SVKI K G GF++F+N AE+ L
Sbjct: 71 TLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQVLQN 130
Query: 120 LNGTVIG--KQSVRLSWGRNPANKQ 142
NG ++ Q +L+W + A ++
Sbjct: 131 YNGQMMPNVNQPFKLNWATSGAGEK 155
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 76/93 (81%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QS+ D +NTTIFVGGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +A
Sbjct: 304 QGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSA 363
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
EEAL L GT++G Q+VRLSWGR+P+NKQ S
Sbjct: 364 EEALVILQGTLVGGQNVRLSWGRSPSNKQVQDS 396
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK------GCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F + Y + K+ K G GFV+F +
Sbjct: 207 DTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQ 266
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
A+ ++NG + + +R+ ANK+A++
Sbjct: 267 ARAMTEMNGMLCSSRPMRIG---PAANKKATV 295
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 113
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 116 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 175
Query: 114 EEALHKLNGTVIGKQSV--RLSW 134
E L NGT++ + RL+W
Sbjct: 176 ERVLQTYNGTMMPNVELPFRLNW 198
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 72/93 (77%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
G Q+E D +NTTIFVG LD NVTDE LRQ FSQYGE+ VKIP GK CGFVQF++R AE
Sbjct: 255 GTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAE 314
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
EAL LNGT IG Q++RLSWGR+P+NKQ P
Sbjct: 315 EALRILNGTPIGGQNIRLSWGRSPSNKQPQADP 347
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 50 GAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GC 102
G+P GQ PQ T+++G L + + + F+ GE++SVK+ K G
Sbjct: 50 GSPQGQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGY 109
Query: 103 GFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 134
GF++F R AE L NGT + G Q+ RL+W
Sbjct: 110 GFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNW 143
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 107
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEY 159
+ A+ ++NG + +R+ ANK S S QF K Y
Sbjct: 207 GDESEQIRAMTEMNGVHCSSRPMRIGPA---ANKNTS-----GSQQFSKTSY 250
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 77/98 (78%), Gaps = 3/98 (3%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 104
G+ + G P P ++ D SNTT+FVGGLD +V DEDL+Q FSQ+G+I VKIP GK CGF
Sbjct: 204 GFQNFGVP---PLTDNDPSNTTVFVGGLDHSVKDEDLKQVFSQFGDIQYVKIPAGKNCGF 260
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
VQF R +AEEAL KL+G+ IG+Q++RLSWGR+PANKQ
Sbjct: 261 VQFYTRASAEEALQKLHGSTIGQQTIRLSWGRSPANKQ 298
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 104
P QGP + +IFVG L P+VTD L++ F S+Y + K+ + KG GF
Sbjct: 108 PDQGP-------DFSIFVGDLAPDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGF 160
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
V+F + A+ ++ G + +R+S P A++ P
Sbjct: 161 VRFGDEAEKMRAMTEMAGVYCSTRPMRIS-TATPKKSLATIPP 202
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L F+ E+ K+ K G GFV+F N AE+ L
Sbjct: 22 TLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGYSEGYGFVEFTNHSTAEKVLQS 81
Query: 120 LNGTVIGKQSV--RLSWG 135
NGT + + RL+W
Sbjct: 82 FNGTQMPSTDIAFRLNWA 99
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 73/89 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 257 QGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASA 316
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEA+ LNG+ +G QS+RLSWGR+P NKQ
Sbjct: 317 EEAIRMLNGSQLGGQSIRLSWGRSPGNKQ 345
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 35 NIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 93
N VF L +A++GA G + D S+ TIFVG L +VTD L+ F + Y +
Sbjct: 137 NQVFKL----NWATSGA---GEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKG 189
Query: 94 VKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
K+ KG GFV+F + + A+ ++NG + +R+ N N
Sbjct: 190 AKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 242
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 120 LNGTVI--GKQSVRLSWGRNPANKQ 142
NG ++ G Q +L+W + A ++
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEK 152
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 73/89 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 257 QGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASA 316
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEA+ LNG+ +G QS+RLSWGR+P NKQ
Sbjct: 317 EEAIRMLNGSQLGGQSIRLSWGRSPGNKQ 345
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 35 NIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 93
N VF L +A++GA G + D S+ TIFVG L +VTD L+ F + Y +
Sbjct: 137 NQVFKL----NWATSGA---GEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKG 189
Query: 94 VKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
K+ KG GFV+F + + A+ ++NG + +R+ N N
Sbjct: 190 AKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 242
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 120 LNGTVI--GKQSVRLSWGRNPANKQ 142
NG ++ G Q +L+W + A ++
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEK 152
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 73/89 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 257 QGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASA 316
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEA+ LNG+ +G QS+RLSWGR+P NKQ
Sbjct: 317 EEAIRMLNGSQLGGQSIRLSWGRSPGNKQ 345
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 35 NIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 93
N VF L +A++GA G + D S+ TIFVG L +VTD L+ F + Y +
Sbjct: 137 NQVFKL----NWATSGA---GEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKG 189
Query: 94 VKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
K+ KG GFV+F + + A+ ++NG + +R+ N N
Sbjct: 190 AKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 242
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 120 LNGTVI--GKQSVRLSWGRNPANKQ 142
NG ++ G Q +L+W + A ++
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEK 152
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 73/84 (86%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIF+G LDPNVT+E+LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+
Sbjct: 222 DSDLTNTTIFIGNLDPNVTEEELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQ 281
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQ 142
+L+GTVIG+Q VRLSWGR+PANKQ
Sbjct: 282 RLHGTVIGQQVVRLSWGRSPANKQ 305
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A
Sbjct: 109 DHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRA 168
Query: 117 LHKLNGTVIGKQSVRLS 133
+ ++NG + +R+S
Sbjct: 169 MSEMNGVYCSTRPMRIS 185
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + L F+ GE+ SVK+ K G GF++F + E AE+ L
Sbjct: 18 TLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEKVLQA 77
Query: 120 LNGTVI--GKQSVRLSWG 135
NG + + + RL+W
Sbjct: 78 YNGAQMPGTELTFRLNWA 95
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 73/89 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 301 QGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASA 360
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEA+ LNG+ +G QS+RLSWGR+P NKQ
Sbjct: 361 EEAIRMLNGSQLGGQSIRLSWGRSPGNKQ 389
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 35 NIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 93
N VF L +A++GA G + D S+ TIFVG L +VTD L+ F + Y +
Sbjct: 181 NQVFKL----NWATSGA---GEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKG 233
Query: 94 VKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
K+ KG GFV+F + + A+ ++NG + +R+ N N
Sbjct: 234 AKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 286
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 112 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 171
Query: 120 LNGTVI--GKQSVRLSWGRNPANKQ 142
NG ++ G Q +L+W + A ++
Sbjct: 172 YNGQMMPNGNQVFKLNWATSGAGEK 196
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 44 GGYASNGAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 102
GG P QG QSE D +NTTIFVGGLDPNVT++ L+Q FS YGE+ VKIPVGK C
Sbjct: 266 GGVVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRC 325
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
GFVQF R +AE+AL L G +IG Q+VRLSWGR+ +NKQA
Sbjct: 326 GFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQA 366
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 178 DTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQ 237
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 238 ARAMTEMNGMPCSSRPMRI 256
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIFVGGLD N+T+E+++Q FSQ GE+ SVKIP GKGC FVQ+A R +AE+AL
Sbjct: 260 DSDPTNTTIFVGGLDLNITEEEVKQTFSQIGELVSVKIPPGKGCAFVQYAQRNSAEDALQ 319
Query: 119 KLNGTVIGKQSVRLSWGRNP-ANKQASLSPFTSSTQ 153
+L+GTVIG+Q++RLSWGR+P + KQA SP+ + Q
Sbjct: 320 RLHGTVIGQQAIRLSWGRSPTSTKQAPTSPWGDAAQ 355
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 105
G G + +IFVG L P+VTD L + F +++ + K+ + KG GFV
Sbjct: 109 GMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFPSVRGAKVVIDAVTGRSKGYGFV 168
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSST 152
+FA+ A+ ++NG + +R+S A L+ T++T
Sbjct: 169 RFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAAGLTTVTAAT 215
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + LR F+ GE+ S K+ K G GF++F + AE L
Sbjct: 29 TLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVLLA 88
Query: 120 LNGTVIGK--QSVRLSWG 135
NGT + + Q+ RL+W
Sbjct: 89 YNGTQMPQTEQAFRLNWA 106
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q E D +NTTIFVG LDP+VTD+ LR FS+YGE+ VKIP GK CGFVQFANR +A
Sbjct: 258 QGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTSA 317
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL LNGT I Q++RLSWGR+P+NKQ
Sbjct: 318 EQALSMLNGTQIAGQNIRLSWGRSPSNKQ 346
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFV 105
G G + + D + T+FVG L +V D L++ F Y + K+ KG GF+
Sbjct: 150 GAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYPSVKGAKVVTDRVTGRSKGYGFI 209
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEY 159
+FA+ A+ ++NG + +R+ PA A+ P T Q++K Y
Sbjct: 210 RFADENEQRRAMVEMNGQYCSTRPMRIG----PA---ATKKPLTQ--QYQKATY 254
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
++++G L + + L FS GEI K+ K G GF++F +R AE L
Sbjct: 70 SLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERILQT 129
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + +Q+ RL+W
Sbjct: 130 YNGTPMPNSEQAFRLNWA 147
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 78/107 (72%), Gaps = 4/107 (3%)
Query: 41 VLIGGYASNGAPGQGPQS---EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 97
V + YA+ GA PQ+ + D +NTTIFVGGLDP V DEDLR F Q+GE+ VKIP
Sbjct: 199 VAVATYAAYGA-QPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIP 257
Query: 98 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
GKGCGFVQF +R AEEAL +L+ TVIG Q+VRLSWGR+P NKQ +
Sbjct: 258 AGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTA 304
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F ++Y + K+ KG GFV+F + A+
Sbjct: 102 SIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMS 161
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSP 147
++NG + +R+S A + SL P
Sbjct: 162 EMNGVYCSSRPMRIS----AATPKKSLGP 186
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L F GE+ SVKI K G GFV+F + AE+ L
Sbjct: 9 TLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKILQA 68
Query: 120 LNGTVI--GKQSVRLSW 134
NGT + +Q RL+W
Sbjct: 69 YNGTQMPNTEQPFRLNW 85
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 73/90 (81%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
QG QSE D +NTTIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +
Sbjct: 221 AQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPS 280
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
AE+AL L GT+IG Q+VRLSWGR+ +NKQ
Sbjct: 281 AEQALAVLQGTLIGGQNVRLSWGRSLSNKQ 310
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 125 DTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQ 184
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + + +R+
Sbjct: 185 ARAMTEMNGMLCSSRPMRI 203
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 40 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 99
Query: 120 LNGTVIG--KQSVRLSWG 135
NG ++ + RL+W
Sbjct: 100 YNGQMMPNVEMVFRLNWA 117
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q E D +NTTIFVG LDP+V+DE LRQ F +YGE+ VKIP GK CGFVQFANR A
Sbjct: 255 QGTQGENDPNNTTIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGKRCGFVQFANRACA 314
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
E+AL LNGT + QS+RLSWGR+P+NKQA
Sbjct: 315 EQALLGLNGTQLAGQSIRLSWGRSPSNKQA 344
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 107
G + + D + T+FVG L P+V D L++ F + Y + K+ KG GFV+F
Sbjct: 149 GERRQDDGPDYTVFVGDLAPDVNDFILQETFRTVYPSVKGAKVVTDRLTGRTKGYGFVRF 208
Query: 108 ANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQASLSPFTSS 151
+ A+ ++NG +++R+ + + PA +Q +P+ S+
Sbjct: 209 GDENEQRRAMVEMNGQYCSTRAMRIGPAATKKPAVQQYQKAPYQST 254
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
++++G L + + L FS GE+ S K+ K G GF++F NR AE L
Sbjct: 67 SLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERILQT 126
Query: 120 LNGTVI--GKQSVRLSW 134
NGT + +Q+ RL+W
Sbjct: 127 YNGTQMPNTEQNFRLNW 143
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 77/100 (77%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
P Q ++ D +NTTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R
Sbjct: 240 PLQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRT 299
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSS 151
+AEEA+ ++ GTVIG+ VR+SWGR+P KQA S ++S+
Sbjct: 300 SAEEAIQRMQGTVIGQLVVRISWGRSPTAKQADPSQWSSA 339
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 195 EMNGVYCSTRPMRIS 209
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + +Q+ RL+W
Sbjct: 102 YNGTQMPGTEQTFRLNWA 119
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 44 GGYASNGAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 102
GG P QG QSE D +NTTIFVGGLDPNVT++ L+Q FS YGE+ VKIPVGK C
Sbjct: 266 GGVVQERVPNSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRC 325
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
GFVQF R +AE+AL L G +IG Q+VRLSWGR+ +NKQA
Sbjct: 326 GFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQA 366
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFANRENA 113
D+ TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 178 DTPEYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQ 237
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 238 ARAMTEMNGMPCSSRPMRI 256
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 70/89 (78%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q E D +NTTIFVG LDP+VTD+ LR FS+YGE+ VKIP GK CGFVQFANR A
Sbjct: 256 QGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTCA 315
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL LNGT I Q++RLSWGR+P+NKQ
Sbjct: 316 EQALSMLNGTQIAGQNIRLSWGRSPSNKQ 344
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFV 105
G G + + D + T+F+G L +V D L++ F Y + K+ KG GFV
Sbjct: 148 GAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVYSSVKGAKVVTDRVTGRSKGYGFV 207
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEYNA 161
+FA+ A+ ++NG + +R+ PA A+ P T Q++K Y +
Sbjct: 208 RFADENEQMRAMVEMNGQYCSTRPMRIG----PA---ATKKPLTQ--QYQKAAYQS 254
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
++++G L + + + FS GE+ K+ K G GF++F + AE L
Sbjct: 68 SLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAERILQT 127
Query: 120 LNGTVI--GKQSVRLSW 134
NGT + +Q+ RL+W
Sbjct: 128 YNGTPMPNSEQTFRLNW 144
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 2/120 (1%)
Query: 30 SYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYG 89
S Q+ + YA A P S D +NTTIF+G LDPN T+E+LRQ Q+G
Sbjct: 195 SQLQYGTAKAMYPAAAYAVPQAQPALPDS--DLTNTTIFIGNLDPNATEEELRQLCVQFG 252
Query: 90 EIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
E+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+IG+Q VRLSWGR+PANKQ + +T
Sbjct: 253 ELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQVVRLSWGRSPANKQDQSAAWT 312
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A
Sbjct: 109 DHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRA 168
Query: 117 LHKLNGTVIGKQSVRLS 133
+ ++NG + +R+S
Sbjct: 169 MSEMNGVYCSTRPMRIS 185
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 18 TLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEFISHEAAEKVLQT 77
Query: 120 LNGTVI--GKQSVRLSWG 135
NG + + + RL+W
Sbjct: 78 YNGAQMPGSEHTFRLNWA 95
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 73/89 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QSE D +NTTIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +A
Sbjct: 274 QGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSA 333
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL L GT+IG Q+VRLSWGR+ +NKQ
Sbjct: 334 EQALAVLQGTLIGGQNVRLSWGRSLSNKQ 362
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 177 DTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQ 236
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + + +R+
Sbjct: 237 ARAMTEMNGMLCSSRPMRI 255
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 92 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 151
Query: 120 LNGTVIGKQSV--RLSW 134
NG ++ + RL+W
Sbjct: 152 YNGQMMPNVEMVFRLNW 168
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 73/89 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QSE D +NTTIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +A
Sbjct: 273 QGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSA 332
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL L GT+IG Q+VRLSWGR+ +NKQ
Sbjct: 333 EQALAVLQGTLIGGQNVRLSWGRSLSNKQ 361
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 176 DTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQ 235
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + + +R+
Sbjct: 236 ARAMTEMNGMLCSSRPMRI 254
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 91 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 150
Query: 120 LNGTVIG--KQSVRLSW 134
NG ++ + RL+W
Sbjct: 151 YNGQMMPNVEMVFRLNW 167
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 73/89 (82%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QSE D +NTTIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +A
Sbjct: 262 QGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSA 321
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL L GT+IG Q+VRLSWGR+ +NKQ
Sbjct: 322 EQALAVLQGTLIGGQNVRLSWGRSLSNKQ 350
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 165 DTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQ 224
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + + +R+
Sbjct: 225 ARAMTEMNGMLCSSRPMRI 243
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 80 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 139
Query: 120 LNGTVIG--KQSVRLSW 134
NG ++ + RL+W
Sbjct: 140 YNGQMMPNVEMVFRLNW 156
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 68/82 (82%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D++NTTIFVG LDPN+T+E+L+Q F Q+GEIA VKIP GKGCGFVQF R +AEEA+ K+
Sbjct: 226 DANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKM 285
Query: 121 NGTVIGKQSVRLSWGRNPANKQ 142
G +IG+Q VR SWGRNPA KQ
Sbjct: 286 QGKIIGQQVVRTSWGRNPAAKQ 307
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 104
P GP+ +IFVG L P+VTD L++ F +QY + K+ KG GF
Sbjct: 107 PDAGPEH-------SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLS 133
V+FA+ A+ ++NG + +R+S
Sbjct: 160 VKFADENERNRAMSEMNGVYCSTRPMRIS 188
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 120 LNGTVI--GKQSVRLSW 134
NGT + +Q+ RL+W
Sbjct: 81 YNGTQMPGTEQTFRLNW 97
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIFVGGLD N+T+E+++Q FS GE+ SVKIP GKGC FVQ+A R +AE+AL
Sbjct: 242 DSDPTNTTIFVGGLDLNITEEEVKQTFSHIGELVSVKIPPGKGCAFVQYAQRNSAEDALQ 301
Query: 119 KLNGTVIGKQSVRLSWGRNP-ANKQASLSPFTSSTQ 153
+L+GTVIG+Q++RLSWGR+P + KQA SP+ + Q
Sbjct: 302 RLHGTVIGQQAIRLSWGRSPTSTKQAPTSPWRDAAQ 337
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L + F +++ + K+ + KG GFV+FA+ A+
Sbjct: 122 SIFVGDLAPDVTDYMLHETFRTRFPSVRGAKVVIDAVTGRSKGYGFVRFADENERARAMS 181
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSPFTSST 152
++NG + +R+S A L+ T++T
Sbjct: 182 EMNGVYCSSRPMRISAATPKKAMAAGLTTVTAAT 215
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + LR F+ GE+ S K+ K G GF++F + AE L
Sbjct: 29 TLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVLLA 88
Query: 120 LNGTVIGK--QSVRLSWG 135
NGT + + Q+ RL+W
Sbjct: 89 YNGTQMPQTEQAFRLNWA 106
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 68/82 (82%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D++NTTIFVG LDPN+T+E+L+Q F Q+GEIA VKIP GKGCGFVQF R +AEEA+ K+
Sbjct: 231 DANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKM 290
Query: 121 NGTVIGKQSVRLSWGRNPANKQ 142
G +IG+Q VR SWGRNPA KQ
Sbjct: 291 QGKIIGQQVVRTSWGRNPAAKQ 312
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 104
P GP+ +IFVG L P+VTD L++ F +QY + K+ KG GF
Sbjct: 107 PDAGPEH-------SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLS 133
V+FA+ A+ ++NG + +R+S
Sbjct: 160 VKFADENERNRAMSEMNGXYCSTRPMRIS 188
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + +Q+ RL+W
Sbjct: 81 YNGTQMPGTEQTFRLNWA 98
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 74/84 (88%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIF+G LDPNVT+++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+
Sbjct: 220 DSDPTNTTIFIGNLDPNVTEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQ 279
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQ 142
+L+GT+IG+Q+VRLSWGR+PA+KQ
Sbjct: 280 RLHGTMIGQQAVRLSWGRSPASKQ 303
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 116 ALHKLNGTVIGKQSVRLS 133
A+ ++NG + +R+S
Sbjct: 166 AMTEMNGVYCSTRPMRIS 183
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
T+++G L + L F+ GE+ SVKI + +G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + + + RL+W
Sbjct: 76 YNGTQMPGTEHTFRLNWA 93
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 46 YASNGA--PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
YA++GA +G SE D +NTT+FVGGLD NV +E LRQ F+ YGEI+ VKIPVGK CG
Sbjct: 298 YATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHCG 357
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
FVQF +R AEEA+ LNG+ +G Q VRLSWGR+P N+QAS
Sbjct: 358 FVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSPQNRQAS 398
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 60 GDS-SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRE 111
GDS S+ TIFVG L +VTD L F ++Y + + V KG GFV+F +
Sbjct: 203 GDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLN 262
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
A+ ++NG ++ + +R+ N N+ A
Sbjct: 263 EQARAMTEMNGMLLSTRQMRIGAAANKKNRDA 294
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 46 YASNGA--PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
YA++GA +G SE D +NTT+FVGGLD NV +E LRQ F+ YGEI+ VKIPVGK CG
Sbjct: 298 YATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHCG 357
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
FVQF +R AEEA+ LNG+ +G Q VRLSWGR+P N+QAS
Sbjct: 358 FVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSPQNRQAS 398
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 60 GDS-SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRE 111
GDS S+ TIFVG L +VTD L F ++Y + + V KG GFV+F +
Sbjct: 203 GDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLN 262
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
A+ ++NG ++ + +R+ N N+ A
Sbjct: 263 EQARAMTEMNGMLLSTRQMRIGAAANKKNRDA 294
>gi|413918499|gb|AFW58431.1| hypothetical protein ZEAMMB73_000058 [Zea mays]
Length = 175
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
Query: 35 NIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV 94
N+ LL + + + PG S+GDSSN T++VGGLDPNV++++LR+ F++Y ++ASV
Sbjct: 21 NMCSLLKFLNSDSGSSTPGH---SDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASV 76
Query: 95 KIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
KIP+GK CGFVQF +R +AEEAL LNG++IGKQ+VRLSW R+P++KQ+
Sbjct: 77 KIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQS 125
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QSE D +NTTIFVGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +A
Sbjct: 271 QGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTRPSA 330
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL L G +IG Q+VRLSWGR+ +NKQ
Sbjct: 331 EQALLMLQGALIGAQNVRLSWGRSLSNKQ 359
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 172 DTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQ 231
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 232 ARAMTEMNGMPCSSRPMRI 250
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 120 LNGTVIGKQSV--RLSW 134
NG ++ + RL+W
Sbjct: 147 YNGQMMPNVDLTFRLNW 163
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 74/86 (86%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIF+G LDPNV +++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+
Sbjct: 220 DSDPTNTTIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQ 279
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQAS 144
+L+GT+IG+Q+VRLSWGR+PA+KQ S
Sbjct: 280 RLHGTMIGQQAVRLSWGRSPASKQDS 305
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 116 ALHKLNGTVIGKQSVRLS 133
A+ ++NG + +R+S
Sbjct: 166 AMTEMNGVYCSTRPMRIS 183
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
T+++G L + L F+ GE+ SVKI + +G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + + + RL+W
Sbjct: 76 YNGTQMPGTEHTFRLNWA 93
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG QSE D +NTTIFVGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +A
Sbjct: 271 QGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTRPSA 330
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL L G +IG Q+VRLSWGR+ +NKQ
Sbjct: 331 EQALLMLQGALIGAQNVRLSWGRSLSNKQ 359
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 172 DTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQ 231
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 232 ARAMTEMNGMPCSSRPMRI 250
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 120 LNGTVIGKQSV--RLSW 134
NG ++ + RL+W
Sbjct: 147 YNGQMMPNVDLTFRLNW 163
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 74/86 (86%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIF+G LDPNV +++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+
Sbjct: 220 DSDPTNTTIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQ 279
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQAS 144
+L+GT+IG+Q+VRLSWGR+PA+KQ S
Sbjct: 280 RLHGTMIGQQAVRLSWGRSPASKQDS 305
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 116 ALHKLNGTVIGKQSVRLS 133
A+ ++NG + +R+S
Sbjct: 166 AMTEMNGVYCSTRPMRIS 183
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
T+++G L + L F+ GE+ SVKI + +G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + + + RL+W
Sbjct: 76 YNGTQMPGTEHTFRLNWA 93
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 69/86 (80%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
AP Q ++GD +NTTIFVG LDPN T+EDLRQ F Q GEIASVKIP G+GCGFVQFA R
Sbjct: 216 APVQVVSADGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEIASVKIPAGRGCGFVQFATR 275
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
+AEEA+ ++ G VIG+Q VR+SWG+
Sbjct: 276 TSAEEAIQRMQGHVIGQQPVRISWGK 301
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGF 104
P GP+ +IFVG L P+VTD L++ F Y + K+ KG GF
Sbjct: 107 PDAGPEH-------SIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGF 159
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLS 133
V+FA+ A+ ++NG + +R+S
Sbjct: 160 VKFADENERNRAMTEMNGVFCSTRPMRIS 188
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------ 100
A+ APG Q T+++G L + L F+ GE+ S+KI K
Sbjct: 2 AAPTAPGGYHQPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPE 61
Query: 101 GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 135
G GFV+F + AE L NGT + +Q+ RL+W
Sbjct: 62 GYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWA 98
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 43 IGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 102
+GG AS QG ++ D SNTTIFVG LD NVTDE LRQ FS YGE+ VKIP GK C
Sbjct: 166 VGGTASY-QNNQGTPNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQC 224
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
GFVQF NR +AEEAL LNG +G ++VRLSWGR+P N+Q+
Sbjct: 225 GFVQFTNRSSAEEALRVLNGMQLGGRNVRLSWGRSPNNRQS 265
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 105
G G + D+S+ TIFVG L P+VTD L++ F +Y + K+ + KG GFV
Sbjct: 71 GSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRLTSRSKGYGFV 130
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
+F + A+ ++NG + +++R+ N
Sbjct: 131 RFGDESEQARAMSEMNGMMCLGRAMRIGAAAN 162
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 70/88 (79%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
P E D +NTTIFVGGLD NV+ +DL+ FS YGEI KIP G+GCGFVQF R +AE
Sbjct: 210 APAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYTKIPPGRGCGFVQFMTRASAE 269
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EAL +++G+VIG+Q+VRLSWGR+PANKQ
Sbjct: 270 EALKQVHGSVIGQQTVRLSWGRHPANKQ 297
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEE 115
++ +IFVG L +VTD L + F S+Y + S K+ + +G GFV+F +
Sbjct: 105 ADDSIFVGDLAADVTDAMLLETFKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKSS 164
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ +++G + +R+
Sbjct: 165 AMTEMHGVYCSSRPMRI 181
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 70/88 (79%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
P E D +NTTIFVGGLD NV+ +DL+ FS YGEI KIP G+GCGFVQF R +AE
Sbjct: 210 APAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYTKIPPGRGCGFVQFMTRASAE 269
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EAL +++G+VIG+Q+VRLSWGR+PANKQ
Sbjct: 270 EALKQVHGSVIGQQTVRLSWGRHPANKQ 297
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEE 115
++ +IFVG L +VTD L + F S+Y + S K+ + +G GFV+F +
Sbjct: 105 ADDSIFVGDLAADVTDAMLLETFKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSS 164
Query: 116 ALHKLNGTVIGKQSVRL 132
A+ +++G + +R+
Sbjct: 165 AMTEMHGVYCSSRPMRI 181
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 70/88 (79%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
PQ++GD +NTTIFVG LD NV D+ L++ F QYG++ VKIP GK CGFVQFA+R +AEE
Sbjct: 240 PQNDGDPNNTTIFVGNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRCGFVQFADRSSAEE 299
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANKQA 143
AL LNG + Q++RLSWGRNP+NKQA
Sbjct: 300 ALKMLNGAQLSGQNIRLSWGRNPSNKQA 327
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + + F+ GE+ASVKI K G GF++ + AE L
Sbjct: 51 TLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAERILQT 110
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + G+Q+ RL+W
Sbjct: 111 YNGTPMPNGEQNFRLNWA 128
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KG 101
N A G DS + TIFVG L +VTD L++ F + + + K+ + KG
Sbjct: 126 NWASFSGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKG 185
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
GFV+F + A+ ++NG + +R+ N
Sbjct: 186 YGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLASN 221
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 72/78 (92%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 125
T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VI
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 60
Query: 126 GKQSVRLSWGRNPANKQA 143
GKQ+VRLSWGR+P++KQ+
Sbjct: 61 GKQAVRLSWGRSPSHKQS 78
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 71/91 (78%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
P Q ++ D +NTTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R
Sbjct: 240 PLQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRT 299
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
+AEEA+ ++ GTVIG+ VR+SWGR+P KQ
Sbjct: 300 SAEEAIQRMQGTVIGQLVVRISWGRSPTAKQ 330
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 195 EMNGVYCSTRPMRIS 209
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + +Q+ RL+W
Sbjct: 102 YNGTQMPGTEQTFRLNWA 119
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 71/91 (78%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
P Q ++ D +NTTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R
Sbjct: 240 PLQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRT 299
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
+AEEA+ ++ GTVIG+ VR+SWGR+P KQ
Sbjct: 300 SAEEAIQRMQGTVIGQLVVRISWGRSPTAKQ 330
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 195 EMNGVYCSTRPMRIS 209
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + +Q+ RL+W
Sbjct: 102 YNGTQMPGTEQTFRLNWA 119
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDSSN T++VGGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 285 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEA 343
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG++IGKQ+VRLSW R+P++KQ+
Sbjct: 344 LQGLNGSLIGKQAVRLSWVRSPSHKQS 370
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 248
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 249 HAMSEMNGVYCSTRPIRI 266
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 105
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 86 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 145
Query: 106 QFANRENAEEALHKLNGTVI--GKQSVRLSW 134
+F + +AE+AL G V+ + +L+W
Sbjct: 146 EFFSHASAEKALQNFTGHVMPNTDRPFKLNW 176
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 73/90 (81%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
QG Q++ D SN+TIFVGGLDP+ T++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R +
Sbjct: 266 AQGIQTDNDPSNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSS 325
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
AEEAL L GT+I Q+VRLSWGR+P+NKQ
Sbjct: 326 AEEALLMLQGTMIEGQNVRLSWGRSPSNKQ 355
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENA 113
D ++ TIFVG L +VTD L++ F +QY + K+ KG GFV+F +
Sbjct: 169 DGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQ 228
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
A+ ++NG + + +R+ ANKQ
Sbjct: 229 TRAMTEMNGMICSSRPMRIG---PAANKQ 254
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 100
Y P Q P G + T+++G L + + + F+ GE+ SVK+ K
Sbjct: 66 YGWPSVPTQAP--AGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQL 123
Query: 101 -GCGFVQFANRENAEEALHKLNGTVIG--KQSVRLSWG 135
G GF++F +R AE L NG ++ + + RL+W
Sbjct: 124 QGYGFIEFTSRAGAERVLQTFNGAMMPNVEMTYRLNWA 161
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 73/90 (81%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
QG Q++ D SN+TIFVGGLDP+ T++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R +
Sbjct: 266 AQGIQTDNDPSNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSS 325
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
AEEAL L GT+I Q+VRLSWGR+P+NKQ
Sbjct: 326 AEEALLMLQGTMIEGQNVRLSWGRSPSNKQ 355
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENA 113
D ++ TIFVG L +VTD L++ F +QY + K+ KG GFV+F +
Sbjct: 169 DGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQ 228
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
A+ ++NG + + +R+ ANKQ
Sbjct: 229 TRAMTEMNGMICSSRPMRIG---PAANKQ 254
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 100
Y P Q P G + T+++G L + + + F+ GE+ SVK+ K
Sbjct: 66 YGWPSVPTQAP--AGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQL 123
Query: 101 -GCGFVQFANRENAEEALHKLNGTVIG--KQSVRLSWG 135
G GF++F +R AE L NG ++ + + RL+W
Sbjct: 124 QGYGFIEFTSRAGAERVLQTFNGAMMPNVEMAYRLNWA 161
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDSSN T++VGGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 285 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEA 343
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG++IGKQ+VRLSW R+P++KQ+
Sbjct: 344 LQGLNGSLIGKQAVRLSWVRSPSHKQS 370
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 248
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 249 HAMSEMNGVYCSTRPIRI 266
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 105
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 86 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 145
Query: 106 QFANRENAEEALHKLNGTVI--GKQSVRLSW 134
+F + +AE+AL G V+ + +L+W
Sbjct: 146 EFFSHASAEKALQNFTGHVMPNTDRPFKLNW 176
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 46 YASNGA--PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
YA+NGA QG SE D +NTT+FVGGLD NV +E LRQ F+ YGEI+ VKIPVGK CG
Sbjct: 330 YATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHCG 389
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
FVQF +R AEEA+ LNG+ IG Q RLSWGR+ N+QAS
Sbjct: 390 FVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQNRQAS 430
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 113
+ S+ IFVG L P+VTD L F + Y + K+ V KG GFV F +
Sbjct: 237 NGSDHAIFVGDLAPDVTDSMLEDVFRANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQ 296
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
A+ ++NG ++ + +R+ + N A
Sbjct: 297 ARAMTEMNGMMLSTRKMRIGAAASKKNTDA 326
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 46 YASNGA--PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 103
YA+NGA QG SE D +NTT+FVGGLD NV +E LRQ F+ YGEI+ VKIPVGK CG
Sbjct: 299 YATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHCG 358
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
FVQF +R AEEA+ LNG+ IG Q RLSWGR+ N+QAS
Sbjct: 359 FVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQNRQAS 399
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 113
+ S+ IFVG L P+VTD L F + Y + K+ V KG GFV F +
Sbjct: 206 NGSDHAIFVGDLAPDVTDSMLEDVFRANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQ 265
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
A+ ++NG ++ + +R+ + N A
Sbjct: 266 ARAMTEMNGMMLSTRKMRIGAAASKKNTDA 295
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+GDSSN T++VGGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 234 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEA 292
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
L LNG++IGKQ+VRLSW R+P++KQ+
Sbjct: 293 LQGLNGSLIGKQAVRLSWVRSPSHKQS 319
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 114
+S+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 138 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 197
Query: 115 EALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 198 HAMSEMNGVYCSTRPIRI 215
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 105
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 35 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 94
Query: 106 QFANRENAEEALHKLNGTVI--GKQSVRLSW 134
+F + +AE+AL G V+ + +L+W
Sbjct: 95 EFFSHASAEKALQNFTGHVMPNTDRPFKLNW 125
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 73/100 (73%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
AP Q ++ D +NTTIFVG LDPNVT+E+LR F Q+GEI VKIPVG+GCGFVQFA R
Sbjct: 218 APVQVVPADNDITNTTIFVGNLDPNVTEEELRPIFLQFGEIVYVKIPVGRGCGFVQFATR 277
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTS 150
+AEEA+ ++ G VIG+Q VR+SWGR A L +++
Sbjct: 278 ASAEEAIQRMQGHVIGQQPVRISWGRKQARSTLILDQWSA 317
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 104
P GP+ +IFVG L P+VTD L++ F + Y + K+ KG GF
Sbjct: 109 PDAGPEH-------SIFVGDLSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGF 161
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLS 133
V+F + A+ ++NG + +R+S
Sbjct: 162 VKFGDENERNRAMTEMNGVFCSTRPMRIS 190
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 23 TLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSHVAAERILQT 82
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + +Q+ RL+W
Sbjct: 83 YNGTQMPGTEQTFRLNWA 100
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 67/89 (75%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
Q Q E D +NTTIFVGGLDP V +E LRQ FS YGE+ VKI GK CGFVQF R +A
Sbjct: 271 QATQGESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASA 330
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL LNGT +G QS+RLSWGR+P++KQ
Sbjct: 331 EQALSSLNGTQLGGQSIRLSWGRSPSSKQ 359
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENA 113
DS+ TIFVG L +VTD L++ F S Y + K+ KG GFV+FA+
Sbjct: 172 DSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQ 231
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + + +R+
Sbjct: 232 LRAMTEMNGVLCSTRPMRI 250
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG Q E D +NTTIFVG LD +V ++DL+ F Q+GE+ VKIP GK CGFVQ+ANR A
Sbjct: 268 QGNQGESDPTNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACA 327
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL LNGT +G QS+RLSWGR+P+NKQ
Sbjct: 328 EQALSLLNGTQLGGQSIRLSWGRSPSNKQ 356
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
++++G L P + + L FS G+ S K+ K G GF++F N AE L
Sbjct: 82 SLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATAERILQA 141
Query: 120 LNGTVI--GKQSVRLSWGR 136
NGT + Q+ RL+W +
Sbjct: 142 YNGTTMPSSDQAFRLNWAQ 160
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 105
G G + + + T+FVG L P+VTD L + F + Y + K+ KG GFV
Sbjct: 162 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKGYGFV 221
Query: 106 QFANRENAEEALHKLNGTVIGKQSVR 131
+F + A+ ++NG + +R
Sbjct: 222 RFGDESEQIRAMTEMNGQYCSSRPMR 247
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 69/89 (77%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG E D +NTTIFVG +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+ANR A
Sbjct: 267 QGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACA 326
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL LNGT +G QS+RLSWGR+P+NKQ
Sbjct: 327 EQALSVLNGTQLGGQSIRLSWGRSPSNKQ 355
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFV 105
G G + + + T+FVG L P+VTD L + F + Y + K+ KG GFV
Sbjct: 161 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFV 220
Query: 106 QFANRENAEEALHKLNGTVIGKQSVR 131
+FA+ A+ ++NG + +R
Sbjct: 221 RFADESEQIRAMTEMNGQYCSSRPMR 246
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
++++G L P + + L F GE + K+ K G GF++F N AE L
Sbjct: 81 SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQT 140
Query: 120 LNGTVI--GKQSVRLSWGR 136
NG + +Q+ RL+W +
Sbjct: 141 YNGAPMPSSEQAFRLNWAQ 159
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 69/89 (77%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG E D +NTTIFVG +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+ANR A
Sbjct: 267 QGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACA 326
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+AL LNGT +G QS+RLSWGR+P+NKQ
Sbjct: 327 EQALSVLNGTQLGGQSIRLSWGRSPSNKQ 355
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFV 105
G G + + + T+FVG L P+VTD L + F + Y + K+ KG GFV
Sbjct: 161 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFV 220
Query: 106 QFANRENAEEALHKLNGTVIGKQSVR 131
+FA+ A+ ++NG + +R
Sbjct: 221 RFADESEQIRAMTEMNGQYCSSRPMR 246
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
++++G L P + + L F GE + K+ K G GF++F N AE L
Sbjct: 81 SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQT 140
Query: 120 LNGTVI--GKQSVRLSWGR 136
NG + +Q+ RL+W +
Sbjct: 141 YNGAPMPSSEQAFRLNWAQ 159
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 69/86 (80%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
++E D +NTTIFVG LD NVTD++LR+ F +YG++ VKIP GK CGFVQFA+R AEEA
Sbjct: 282 ENENDPNNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIPAGKRCGFVQFADRSCAEEA 341
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQ 142
L LNGT + QS+RLSWGR+P+NKQ
Sbjct: 342 LRLLNGTSLSGQSIRLSWGRSPSNKQ 367
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + + + F+ GE+ SVK+ K G GF++F + AE L
Sbjct: 90 TLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAERILQT 149
Query: 120 LNGTVI--GKQSVRLSW 134
NGT + G+Q+ RL+W
Sbjct: 150 YNGTPMPNGEQNFRLNW 166
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KG 101
N A G D+ + TIFVG L +VTD L+ F Y + K+ + KG
Sbjct: 165 NWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKG 224
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
GFV+F + A+ +NG + +R+ N
Sbjct: 225 YGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATN 260
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 68/89 (76%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
G ++ D +NTT+FVGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ + AE
Sbjct: 251 GVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAE 310
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQA 143
EAL LNG +G +VRLSWGR+P+NKQ+
Sbjct: 311 EALRMLNGVQLGGTTVRLSWGRSPSNKQS 339
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 113
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 211 IRAMTEMNGVPCSTRPMRI 229
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 68/89 (76%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
G ++ D +NTT+FVGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ + AE
Sbjct: 250 GVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAE 309
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQA 143
EAL LNG +G +VRLSWGR+P+NKQ+
Sbjct: 310 EALRMLNGVQLGGTTVRLSWGRSPSNKQS 338
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 113
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 150 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQ 209
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 210 IRAMTEMNGVPCSTRPMRI 228
>gi|242045812|ref|XP_002460777.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
gi|241924154|gb|EER97298.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
Length = 171
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG SE D +NTT+FVGGLD NV +E LRQ F+ +GEI+ VKIPVGK CGFVQF +R A
Sbjct: 6 QGISSENDPNNTTVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHCGFVQFTSRSCA 65
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
EEA+ LNG+ IG Q VRLSWGR N+QAS
Sbjct: 66 EEAIQMLNGSQIGGQKVRLSWGRT-QNRQAS 95
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 68/84 (80%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+
Sbjct: 243 DSDPTNTTIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQ 302
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQ 142
+L+GT IG+Q VRLSWGR+PA+KQ
Sbjct: 303 RLHGTTIGQQVVRLSWGRSPASKQ 326
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGF 104
P GP + +IFVG L P+VTD L++ F Y + K+ KG GF
Sbjct: 125 PDAGP-------DHSIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGF 177
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLS 133
V+FA+ A+ ++NG + +R+S
Sbjct: 178 VKFADENEKNRAMTEMNGMYCSTRPMRIS 206
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
T+++G L + L F+ GE+ SVKI + +G GF++F + E AE+ L
Sbjct: 39 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 98
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + + + RL+W
Sbjct: 99 YNGTQMPGTEHTFRLNWA 116
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 68/84 (80%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+
Sbjct: 221 DSDPTNTTIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQ 280
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQ 142
+L+GT IG+Q VRLSWGR+PA+KQ
Sbjct: 281 RLHGTTIGQQVVRLSWGRSPASKQ 304
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGF 104
P GP + +IFVG L P+VTD L++ F Y + K+ KG GF
Sbjct: 103 PDAGP-------DHSIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGF 155
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLS 133
V+FA+ A+ ++NG + +R+S
Sbjct: 156 VKFADENEKNRAMTEMNGMYCSTRPMRIS 184
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
T+++G L + L F+ GE+ SVKI + +G GF++F + E AE+ L
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + + + RL+W
Sbjct: 77 YNGTQMPGTEHTFRLNWA 94
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 68/84 (80%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+
Sbjct: 221 DSDPTNTTIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQ 280
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQ 142
+L+GT IG+Q VRLSWGR+PA+KQ
Sbjct: 281 RLHGTTIGQQVVRLSWGRSPASKQ 304
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGF 104
P GP + +IFVG L P+VTD L++ F Y + K+ KG GF
Sbjct: 103 PDAGP-------DHSIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGF 155
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLS 133
V+FA+ A+ ++NG + +R+S
Sbjct: 156 VKFADENEKNRAMTEMNGMYCSTRPMRIS 184
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
T+++G L + L F+ GE+ SVKI + +G GF++F + E AE+ L
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + + + RL+W
Sbjct: 77 YNGTQMPGTEHTFRLNWA 94
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+ANR AE AL
Sbjct: 258 DSDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANRATAEHALS 317
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQ 142
LNGT +G QS+RLSWGR+P NKQ
Sbjct: 318 VLNGTQLGGQSIRLSWGRSP-NKQ 340
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 98
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ V
Sbjct: 141 WAQAGAGEKRHQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVVDRTTGR 198
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132
KG GFV+FA+ A+ ++NG + +R+
Sbjct: 199 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRI 232
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQ 106
G G Q+ G S ++++G L + + + F+Q GE S K+ K G GF++
Sbjct: 53 GVGSQNPG-SEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIE 111
Query: 107 FANRENAEEALHKLNGTVI--GKQSVRLSWGR 136
F N AE L NG + +Q+ RL+W +
Sbjct: 112 FINHSVAERVLQTYNGAQMPSTEQTFRLNWAQ 143
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
Query: 46 YASNGAPGQGPQS---EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 102
Y++NG Q Q + D +NTTIFVGGLD N+ + LRQ F+ YGE+ VKIPVGK C
Sbjct: 298 YSTNGYQSQSSQGNDVQNDPNNTTIFVGGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRC 357
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
GFVQF +R AEEA++ LNGT IG +VRLSWGR+ NKQA
Sbjct: 358 GFVQFTSRSCAEEAINALNGTPIGGNNVRLSWGRSTQNKQA 398
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENA 113
D S+ TIFVG L +VTD L++ F + Y + + KG GFV+F +
Sbjct: 205 DGSDHTIFVGDLASDVTDSMLQEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDVNEQ 264
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPAN 140
A+ ++NG + + +R+ N N
Sbjct: 265 TRAMTEMNGVTLSSRQLRIGPAANKKN 291
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 71/98 (72%), Gaps = 5/98 (5%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
A+ G P ++ D +NTT+FVGGLD +VTD+ L+ F QYGEI VKIP GK CGFVQ
Sbjct: 250 AAGGVP-----TDNDPNNTTVFVGGLDQSVTDDHLKNVFGQYGEIVHVKIPAGKRCGFVQ 304
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
F+ + AEEAL LNG +G +VRLSWGR+P+NKQ++
Sbjct: 305 FSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQSA 342
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 113
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 153 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQ 212
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 213 IRAMTEMNGVPCSTRPMRI 231
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN+ +AE AL
Sbjct: 254 DNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALS 313
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQA 143
LNGT +G QS+RLSWGR+P NKQ+
Sbjct: 314 VLNGTQLGGQSIRLSWGRSP-NKQS 337
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFAN 109
Q+EG + TIFVG L P VTD L F YG + K+ + KG GFV+FA+
Sbjct: 148 QTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFAD 205
Query: 110 RENAEEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 206 ENEQMRAMTEMNGQYCSTRPMRI 228
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 53 GQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 105
G G Q+ G +S+ ++++G L + + + F+Q GE S K+ K G GF+
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 106 QFANRENAEEALHKLNGTVI--GKQSVRLSWGR 136
+F + AE L NG + +Q+ RL+W +
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQ 139
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D +NTTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN+ +AE AL
Sbjct: 254 DNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALS 313
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQA 143
LNGT +G QS+RLSWGR+P NKQ+
Sbjct: 314 VLNGTQLGGQSIRLSWGRSP-NKQS 337
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFAN 109
Q+EG + TIFVG L P VTD L F YG + K+ + KG GFV+FA+
Sbjct: 148 QTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFAD 205
Query: 110 RENAEEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 206 ENEQMRAMTEMNGQYCSTRPMRI 228
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 53 GQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 105
G G Q+ G +S+ ++++G L + + + F+Q GE S K+ K G GF+
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 106 QFANRENAEEALHKLNGTVI--GKQSVRLSWGR 136
+F + AE L NG + +Q+ RL+W +
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQ 139
>gi|125549809|gb|EAY95631.1| hypothetical protein OsI_17488 [Oryza sativa Indica Group]
Length = 263
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 65/80 (81%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
S TIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L G
Sbjct: 120 SAGTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQG 179
Query: 123 TVIGKQSVRLSWGRNPANKQ 142
T+IG Q+VRLSWGR+ +NKQ
Sbjct: 180 TLIGGQNVRLSWGRSLSNKQ 199
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TTIFVGGLDP V++E+L++ F ++GE+ VKIP GKGCGFVQF +R AEEAL KL+GT+
Sbjct: 226 TTIFVGGLDPAVSEEELQKTFGEFGELVYVKIPPGKGCGFVQFTHRSCAEEALGKLHGTM 285
Query: 125 IGKQSVRLSWGRNPANKQ 142
I +Q++RLSWGR ANKQ
Sbjct: 286 IRQQAIRLSWGRT-ANKQ 302
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRE 111
EG N+ IFVG L P+VTD L++ F ++Y + K+ KG GFV+FA+
Sbjct: 108 EGGPENS-IFVGDLAPDVTDYMLQETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFADDS 166
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQ 153
A+ ++NG + +R+ N A + +L P + Q
Sbjct: 167 ERVRAMSEMNGIYCSSRPMRI----NAATPKKALIPSAPAPQ 204
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L FS GE+ S KI K G GFV+FA+ AE L
Sbjct: 21 TLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEGYGFVEFASHACAERVLTA 80
Query: 120 LNGTVIGK--QSVRLSWG 135
GT + + Q RL+W
Sbjct: 81 FTGTQMPQTEQLFRLNWA 98
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 64/87 (73%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
PGQG E D + TTI + LDPNVT+E+L++ FSQ GEI VKIP KG G+VQF R
Sbjct: 225 PGQGLPPESDVTCTTISIANLDPNVTEEELKKAFSQLGEIIYVKIPATKGYGYVQFKTRP 284
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNP 138
+AEEA+ K+ G VIG+Q+VR+SW +NP
Sbjct: 285 SAEEAVQKMQGQVIGQQAVRISWSKNP 311
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 116 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 175
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 176 EMNGLYCSTRPMRIS 190
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L FSQ GE+ SVK+ K G GF++F + AE L
Sbjct: 24 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 83
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + + + RL+W
Sbjct: 84 YNGTQMPGTELTFRLNWA 101
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 66/88 (75%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
G S+ DS+NT +FVGGLD VTDEDL++ FS YGE+ VK+ GK CGFV + NR +AE
Sbjct: 224 GKYSDSDSNNTRLFVGGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCGFVTYLNRASAE 283
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EA+ LNG+++G ++R+SWGR+ +KQ
Sbjct: 284 EAMRILNGSLLGDNTIRISWGRSLYHKQ 311
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFA 108
P + D I+VG L +VTD L F S+Y + KI KG GFV F
Sbjct: 133 PVQKRDDDGHNIYVGDLAFDVTDFMLHHVFKSRYPSVKHAKIAWDHFNGRSKGYGFVVFG 192
Query: 109 NRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
+ +A+ ++NG + +R+ PA K A
Sbjct: 193 DVNERRQAMTEMNGAYCSTRPMRVG----PATKMA 223
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
E D +NT IFVG LD NV++E+L+Q F Q+GEI SVK+ GKGCGFVQF R +AEEA+
Sbjct: 206 EYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGCGFVQFGTRASAEEAIQ 265
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQ 142
K+ +IG+Q VR+SWGR +Q
Sbjct: 266 KMQEKMIGQQVVRISWGRTLTARQ 289
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P++TD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 93 SIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVVSDPNTGRSKGYGFVKFSDENERNRAMT 152
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 153 EMNGVYCSTRPMRIS 167
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 66/96 (68%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
A AP E D +NTTI+VG LD NV++E+L+Q F Q+GEI SVK+ GK CGFVQ
Sbjct: 216 AYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQ 275
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
F R +AEEA+ K+ G ++G+Q +R+SWGR +Q
Sbjct: 276 FGARASAEEAIQKMQGKILGQQVIRVSWGRPQTARQ 311
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 98
+AS G + P + D S IFVG L P+VTD L++ F + YG + K+
Sbjct: 92 WASFGIGERRPDAGPDHS---IFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGR 148
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 133
KG GFV+F++ A+ ++NG + +R+S
Sbjct: 149 SKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRIS 183
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L FS GE+ S+KI K G GF++F + AE L
Sbjct: 16 TLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQT 75
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + +Q+ RL+W
Sbjct: 76 YNGTQMPGTEQTFRLNWA 93
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 5/111 (4%)
Query: 27 RNSSYCQFNIVFL-LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 85
+N Y N++ + L +G Y GAP Q D +NTT+FVGGL VT+E+LR F
Sbjct: 273 KNHMYSPMNMMHIGLQPVGFY---GAP-QPVNQFTDPTNTTVFVGGLSGYVTEEELRFLF 328
Query: 86 SQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+GEI VKIP GKGCGFVQF NR++AE A++++ G +GK +RLSWGR
Sbjct: 329 QNFGEIIYVKIPPGKGCGFVQFVNRQSAELAINQMQGYPLGKSRIRLSWGR 379
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRE 111
EG + +IFVG L P VT+ L F S+Y S KI + +G GFV+F +
Sbjct: 185 EGKTPEFSIFVGDLGPEVTEPMLLSLFQSRYRSCKSAKIMMDSNTNLSRGYGFVRFYDEN 244
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPF 148
+ + AL ++ G G + +R++ P +K SP
Sbjct: 245 DQKRALTEMQGVYCGNRPMRIAMA-TPKSKNHMYSPM 280
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEA 116
+N+T+++G L P +T+ ++Q ++ GE +VKI + G FV+F + +A +A
Sbjct: 96 NNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPASAMKA 155
Query: 117 LHKLNGTVIGKQS--VRLSW 134
+ LNGTVI + +L+W
Sbjct: 156 M-SLNGTVIPGTNRFFKLNW 174
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTTIFVG LD NV++E+L+Q Q+GEI SVKI GKG GFVQF R +AEEA+ K+
Sbjct: 223 DVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKM 282
Query: 121 NGTVIGKQSVRLSWGRNPANKQ 142
G +IG+Q VR+SWGR +Q
Sbjct: 283 QGKMIGQQVVRISWGRTLTARQ 304
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 108 SIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMT 167
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 168 EMNGVYCSTRPMRIS 182
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L F GE+ S+KI K G GFV+F + AE L
Sbjct: 15 TLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQT 74
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + Q+ RL+W
Sbjct: 75 YNGTQMPATDQTFRLNWA 92
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTTIFVG LD NV++E+L+Q Q+GEI SVKI GKG GFVQF R +AEEA+ K+
Sbjct: 223 DVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKM 282
Query: 121 NGTVIGKQSVRLSWGRNPANKQ 142
G +IG+Q VR+SWGR +Q
Sbjct: 283 QGKMIGQQVVRISWGRTLTARQ 304
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 108 SIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMT 167
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 168 EMNGVYCSTRPMRIS 182
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L F GE+ S+KI K G GFV+F + AE L
Sbjct: 15 TLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQT 74
Query: 120 LNGTVI--GKQSVRLSWG 135
NGT + Q+ RL+W
Sbjct: 75 YNGTQMPATDQTFRLNWA 92
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 59/79 (74%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
E D +NTT+F+GGL VT++ LR F +YGEI KIP GKGCGFVQF +R+ AE A+
Sbjct: 115 EADPNNTTLFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFIDRQAAEYAMQ 174
Query: 119 KLNGTVIGKQSVRLSWGRN 137
++NG +IG SVR+SWG++
Sbjct: 175 EVNGQIIGGSSVRISWGKS 193
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKI---PV---GKGCGFVQFANRENAE 114
+++ ++FVG L P V D L F QY + S K+ PV KG GFV+F + +
Sbjct: 1 AADFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERD 60
Query: 115 EALHKLNGTVIGKQSVRLS 133
A+ ++NG I + VR+S
Sbjct: 61 RAVVEMNGVFISSRPVRVS 79
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q D +NTT+F+GGL VT+++LRQ F +G+I +VK+P GKGCGFVQ+ R +AE A
Sbjct: 67 QQPTDPNNTTVFIGGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTTRISAETA 126
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQA 143
+ K+NG +IG +RLSWGR+ +N Q+
Sbjct: 127 IEKMNGFLIGTSRIRLSWGRS-SNHQS 152
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
+ N+T+FVGGLDP +T+ DLR F +GE+ VKIP GKGCGFVQF R +AE ++ L
Sbjct: 218 EPENSTVFVGGLDPTLTEPDLRTHFEAFGELVYVKIPAGKGCGFVQFTRRADAEASIQAL 277
Query: 121 NGTVIGKQSVRLSWGRN 137
NGT++G VRLSW R+
Sbjct: 278 NGTMMGASRVRLSWVRS 294
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T++VG L + + L F+ +G I SVKI K G GFV+F +R AE AL
Sbjct: 14 TLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRATAEHALKT 73
Query: 120 LNGTVI--GKQSVRLSW 134
LNGT + Q+ RL+W
Sbjct: 74 LNGTPMPSAHQNFRLNW 90
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAEE 115
++ ++FVG L P V D L++ F++ Y + + ++ KG GFV+F + +
Sbjct: 107 NDHSVFVGDLPPEVNDYALQETFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDR 166
Query: 116 ALHKLNGTVIGKQSVRLS 133
AL ++NG G + +R+S
Sbjct: 167 ALVEMNGVPCGSRVMRIS 184
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 65/90 (72%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
Q +S D++N+ +FVG LD +VT EDL Q FS YGE+ VK GKGCGFV ++NR +A
Sbjct: 237 QWTESYHDANNSRLFVGQLDQSVTSEDLMQAFSPYGELVDVKALPGKGCGFVTYSNRASA 296
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
EEA+ LNG+ +G ++++LSWG A+KQA
Sbjct: 297 EEAIRMLNGSQLGGKAIKLSWGYPSADKQA 326
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI------PVGKGCGFVQFANRENAE 114
SS+ +IFVG L NVT L F ++Y + S KI + K GFVQF + +
Sbjct: 146 SSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQI 205
Query: 115 EALHKLNGTVIGKQSVRL 132
+AL ++NG + +R+
Sbjct: 206 QALTEMNGAYCSTRPMRI 223
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
L IG YA+ Q P + D +NTT+FVGGL N+T+ L F YG+I VK+P G
Sbjct: 229 LPPIGYYAA----PQPPPAYSDPTNTTVFVGGLSNNITEATLLSIFEPYGQIVHVKVPPG 284
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
KGCGFV+F R +AE A+ +L G VI VRLSWGR+
Sbjct: 285 KGCGFVKFTQRTDAERAIEQLQGYVIDGSRVRLSWGRS 322
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+E+LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 282 DPNNTTVFIGGLSSLVTEEELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKM 341
Query: 121 NGTVIGKQSVRLSWGRNPANKQAS 144
G IG +RLSWGR + KQA+
Sbjct: 342 QGFPIGNSRIRLSWGR--SAKQAA 363
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
+IFVG L PNV++ L + F S+Y + KI V KG GFV+F N + +L
Sbjct: 143 SIFVGDLAPNVSESQLFELFISRYSSTLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLV 202
Query: 119 KLNGTVIGKQSVRLS 133
++ G + +++R+S
Sbjct: 203 EMQGVFLNGRAIRVS 217
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL P V +E+LRQ F +GEI VKIPVGKGCGFVQ+ +R +AE A+ ++
Sbjct: 290 DPNNTTVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQYIDRISAETAISQM 349
Query: 121 NGTVIGKQSVRLSWGRNPANKQ 142
G I VRLSWGR+ +Q
Sbjct: 350 QGFPISNSRVRLSWGRSAKQQQ 371
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDL------RQPFSQYGEIA-SVKIPV 98
+AS+ AP S +N +IFVG L PNVT+ L R P +++ ++ + V
Sbjct: 139 WASSSAPSTAGVSTTGGNNFSIFVGDLAPNVTEAQLFDLFISRYPSTEHAKVVIDLSTGV 198
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQA 143
KG GF++F + + + AL ++ G + +++++ +N A
Sbjct: 199 SKGYGFIRFRDPADQQTALAEMQGVFLNGRALKVGMSSGQSNSGA 243
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 31 YCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 90
+ N+V + + G+ S P PQ D++N+T+FVGGL V++E+L+ F +GE
Sbjct: 272 FSPVNVVPVSMPPVGFYSAAQPV--PQF-ADTANSTVFVGGLSKFVSEEELKYLFQNFGE 328
Query: 91 IASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
I VKIP GKGCGFVQF NR++AE A+++L G +G +RLSWGRN
Sbjct: 329 IVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAE 114
+S +IFVG L PNV + D+ F S+Y S KI V +G GFV+F + + +
Sbjct: 183 ASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQK 242
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
AL ++ G + G + +R+ P +K SP
Sbjct: 243 SALAEMQGQICGDRPIRVGLA-TPKSKAHVFSP 274
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTTIF+G LD NVT+E LR F ++GEIA K KGCGFV F +R++A EA+ L
Sbjct: 296 DPQNTTIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDRQDATEAIENL 355
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPF 148
+G++IG + VRLSWGR+ A K A S +
Sbjct: 356 HGSMIGSKRVRLSWGRHNATKCAIASMY 383
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 7/92 (7%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
DS NTT++VGGL P+V+ E+L+ FS +G+I V+IP GK CGFVQFA NAE+A+ L
Sbjct: 580 DSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFAQHGNAEQAIAHL 639
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSST 152
NG IG Q +RLSWG + P+T ST
Sbjct: 640 NGQYIGGQPIRLSWGHHKL-------PYTVST 664
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPVG-----KGCGFVQFANRENAEEALHK 119
++FVG L +VTD L F Q Y + K+ V KG GFV+F + + AL +
Sbjct: 97 SLFVGDLTADVTDFQLHSFFKQLYASCKTAKVVVDQAGTPKGFGFVRFTDSNDCLRALLE 156
Query: 120 LNGTV-IGKQSVRLS 133
+NG V G + +R+S
Sbjct: 157 MNGAVGCGGKPMRVS 171
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL V++++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 269 DPNNTTVFIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRISAETAIAKM 328
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKK 156
G IG +RLSWGR+ F SS Q ++
Sbjct: 329 QGYPIGNSRIRLSWGRSAKQAAVMQQAFASSAQHRQ 364
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
++FVG + PNV++ L + F S+Y + KI V KG GFV+F + AL
Sbjct: 134 SVFVGDIAPNVSEAQLFELFISRYASTLNAKIVFDQMTGVSKGYGFVKFGQESEQQRALL 193
Query: 119 KLNGTVIGKQSVRLS 133
++ G + ++VR+S
Sbjct: 194 EMQGVFLNGRAVRVS 208
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
E D + TTI V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF R +AEEA+
Sbjct: 227 ESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQ 286
Query: 119 KLNGTVIGKQSVRLSWGRNP 138
++ G VIG+Q+VR+SW +NP
Sbjct: 287 RMQGQVIGQQAVRISWSKNP 306
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 117 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 176
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 177 EMNGLYCSTRPMRIS 191
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 52 PGQGPQSEGDSSNT-----TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------ 100
P Q PQ T T+++G L V + L FSQ GE+ SVK+ K
Sbjct: 6 PPQPPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPE 65
Query: 101 GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 135
G GF++F + AE L NGT + + + RL+W
Sbjct: 66 GYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWA 102
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 278 DPNNTTVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKM 337
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 338 QGFPIGNSRVRLSWGRS 354
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
+IFVG L PNVT+ L + F S+Y + KI V KG GFV+F N + +L
Sbjct: 142 SIFVGDLAPNVTESQLFELFISRYSSTLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLL 201
Query: 119 KLNGTVIGKQSVRLS 133
++ G + +++R+S
Sbjct: 202 EMQGVFLNGRAIRVS 216
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFANREN 112
D+S+T +++G LDP+ T+ D++Q ++ GE A+V++ + K G FV+F +
Sbjct: 48 DTSSTQLYMGDLDPSWTEGDIKQIWATLGE-ANVQVKLIKNSSGGGNSGYCFVEFPSNLA 106
Query: 113 AEEALHK--LNGTVIGKQSVRLSW 134
A AL K L V ++++L+W
Sbjct: 107 ATNALLKTGLPIPVDASRTLKLNW 130
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
E D + TTI V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF R +AEEA+
Sbjct: 231 ESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQ 290
Query: 119 KLNGTVIGKQSVRLSWGRNP 138
++ G VIG+Q+VR+SW +NP
Sbjct: 291 RMQGQVIGQQAVRISWSKNP 310
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 117 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 176
Query: 119 KLNGTVIGKQSVRLS 133
++NG + +R+S
Sbjct: 177 EMNGLYCSTRPMRIS 191
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 52 PGQGPQSEGDSSNT-----TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------ 100
P Q PQ T T+++G L V + L FSQ GE+ SVK+ K
Sbjct: 6 PPQPPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPE 65
Query: 101 GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 135
G GF++F + AE L NGT + + + RL+W
Sbjct: 66 GYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWA 102
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 278 DPNNTTVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKM 337
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 338 QGFPIGNSRVRLSWGRS 354
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
+IFVG L PNVT+ L + F S+Y + KI V KG GFV+F N + +L
Sbjct: 142 SIFVGDLAPNVTESQLFELFISRYSSTLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLL 201
Query: 119 KLNGTVIGKQSVRLS 133
++ G + +++R+S
Sbjct: 202 EMQGVFLNGRAIRVS 216
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFANREN 112
D+S+T +++G LDP+ T+ D++Q ++ GE A+V++ + K G FV+F +
Sbjct: 48 DTSSTQLYMGDLDPSWTEGDIKQIWATLGE-ANVQVKLIKNSSGGGNSGYCFVEFPSNLA 106
Query: 113 AEEALHK--LNGTVIGKQSVRLSW 134
A AL K L V ++++L+W
Sbjct: 107 ATNALLKTGLPIPVDASRTLKLNW 130
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 63/86 (73%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+E + +NTT+F+GGLDP+ T++DLR F GEI SVK+P G+GCGFVQ+ ++ A+ A+
Sbjct: 197 TEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGCGFVQYVTKDAADVAI 256
Query: 118 HKLNGTVIGKQSVRLSWGRNPANKQA 143
+++NG +I VR +WGR+ A + A
Sbjct: 257 NQMNGALINGVKVRCAWGRSAAARLA 282
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 66 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFANRENAEEALH 118
+IFVG L P V+DE L FS ++ + K+ + KG GFV+F ++ A++AL
Sbjct: 97 SIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQ 156
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSPFTSST 152
+NG + +R+S + + + P S T
Sbjct: 157 TMNGVYCSSRPMRVSVATDRTKTRGIMPPPISYT 190
>gi|388851881|emb|CCF54475.1| related to NAM8-meiotic recombination protein [Ustilago hordei]
Length = 926
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S D +NTT+FVGGL ++++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 588 SAADPNNTTVFVGGLSSLISEQTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 647
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
H++NG I +RLSWGR+ +K
Sbjct: 648 HRMNGFPILNSKIRLSWGRSQGDK 671
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL +T+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 312 DPNNTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDRISAETAISKM 371
Query: 121 NGTVIGKQSVRLSWGR 136
G IG +RLSWGR
Sbjct: 372 QGFPIGNSRIRLSWGR 387
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
T+FVG L PNVT+ L + F S+Y + KI V KG GFV+F N + AL
Sbjct: 151 TLFVGDLAPNVTEAQLFELFISRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALV 210
Query: 119 KLNGTVIGKQSVRL 132
++ GT + +++R+
Sbjct: 211 EMQGTFLNGRAIRV 224
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ R +AE A+ K+
Sbjct: 290 DPNNTTVFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGKGCGFVQYVTRSSAELAISKM 349
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG +RLSWGR+ +N
Sbjct: 350 QGYPIGNSRIRLSWGRSNSN 369
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 65 TTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEAL 117
+IFVG L P+V+D L + F S+Y ++ KI + KG GFV+F N + AL
Sbjct: 147 VSIFVGDLAPDVSDTILYEYFGSKYPSVSGTKIMIDSLTGGSKGYGFVRFINELEQKRAL 206
Query: 118 HKLNGTVIGKQSVRLS 133
++ G ++ + +R+S
Sbjct: 207 VEMQGAILNGRPIRVS 222
>gi|393229322|gb|EJD36947.1| hypothetical protein AURDEDRAFT_188233 [Auricularia delicata
TFB-10046 SS5]
Length = 893
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ D NTT+FVGGL P V +E LR F+ +GEI VK+PVGK CGFVQF ++ +AE A+
Sbjct: 401 TSADPYNTTVFVGGLSPLVPEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVHKADAERAI 460
Query: 118 HKLNGTVIGKQSVRLSWGRN 137
K+ G IG +RLSWGR+
Sbjct: 461 EKMQGFPIGGSKIRLSWGRS 480
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
AP E D +NTT+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R
Sbjct: 200 APVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTR 259
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTS 150
+AE+A+ ++ G VIG+Q +++SWG + +Q S +++
Sbjct: 260 VSAEDAIQRMQGKVIGQQVIQISWGSSMTARQMDPSQWSA 299
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 58 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 109
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFAD 148
Query: 110 RENAEEALHKLNGTVIGKQSVRLS 133
A+ ++NG + +R+S
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMRIS 172
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 120 LNGTVI--GKQSVRLSWG 135
NG + +Q+ RL+W
Sbjct: 71 YNGAQMPGTEQTFRLNWA 88
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 46 YASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 98
Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 258 YPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 317
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
GKGCGFVQF R AE A++++ G IG VRLSWGR+
Sbjct: 318 GKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 356
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG 99
GG A +GP+ +IFVG L P V + L F S++ S KI P+
Sbjct: 144 GGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPIS 196
Query: 100 ---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
+G GFV+F++ + + AL ++ G G + +R+S P NK
Sbjct: 197 GMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TPKNK 240
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 103
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYC 108
Query: 104 FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
FV F++ A +AL LNGT + + +L+W
Sbjct: 109 FVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNW 140
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 58/76 (76%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D++NTT+FVGGL +V++++LRQ F +G+I VKIP GKGCGFVQ+ R++AE A+ ++
Sbjct: 230 DANNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPGKGCGFVQYVQRQSAEMAITQM 289
Query: 121 NGTVIGKQSVRLSWGR 136
G IG VRLSWGR
Sbjct: 290 QGYPIGNGRVRLSWGR 305
>gi|444313983|ref|XP_004177649.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
gi|387510688|emb|CCH58130.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
Length = 362
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+ +LR F +GEI VKIP GKGCGFVQ+ R+ AE A+HK+
Sbjct: 251 DPTNTTVFIGGLSSLVTENELRSLFQPFGEIVYVKIPFGKGCGFVQYETRKAAELAIHKM 310
Query: 121 NGTVIGKQSVRLSWGR 136
G I +RLSWG+
Sbjct: 311 KGVSIKNSKIRLSWGK 326
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 7/101 (6%)
Query: 44 GGYASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 96
G Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKI
Sbjct: 259 GMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 318
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
P GKGCGFVQF R AE A++++ G IG VRLSWGR+
Sbjct: 319 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 359
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F +++ S KI P+ +G GFV+F++ + + AL
Sbjct: 162 SIFVGDLGPEVNEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALT 221
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSP 147
++ G G + +R+S P NK + P
Sbjct: 222 EMQGVYCGNRPMRISTA-TPKNKGPGVVP 249
>gi|409050510|gb|EKM59987.1| hypothetical protein PHACADRAFT_250820 [Phanerochaete carnosa
HHB-10118-sp]
Length = 643
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ D NTT+FVGGL P +++E LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 302 TSSDPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 361
Query: 118 HKLNGTVIGKQSVRLSWGRN 137
K+ G IG +RLSWGR+
Sbjct: 362 EKMQGFPIGGSRIRLSWGRS 381
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 7/101 (6%)
Query: 44 GGYASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 96
G Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKI
Sbjct: 260 GMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 319
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
P GKGCGFVQF R AE A++++ G IG VRLSWGR+
Sbjct: 320 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 360
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 162 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALS 221
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
++ G G + +R+S P NK SL
Sbjct: 222 EMQGVYCGNRPMRIS-TATPKNKGPSL 247
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 46 YASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 98
Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 258 YPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 317
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 318 GKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 359
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 159 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALS 218
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 219 EMQGVYCGNRPMRIS-TATPKNK 240
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 103
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYC 108
Query: 104 FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
FV F++ A +AL LNGT + + +L+W
Sbjct: 109 FVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNW 140
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 7/101 (6%)
Query: 44 GGYASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 96
G Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKI
Sbjct: 259 GMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 318
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
P GKGCGFVQF R AE A++++ G IG VRLSWGR+
Sbjct: 319 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 359
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 161 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALS 220
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
++ G G + +R+S P NK SL
Sbjct: 221 EMQGVYCGNRPMRIS-TATPKNKGPSL 246
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 7/101 (6%)
Query: 44 GGYASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 96
G Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKI
Sbjct: 260 GMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 319
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
P GKGCGFVQF R AE A++++ G IG VRLSWGR+
Sbjct: 320 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 360
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 162 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALS 221
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
++ G G + +R+S P NK SL
Sbjct: 222 EMQGVYCGNRPMRIS-TATPKNKGPSL 247
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 7/101 (6%)
Query: 44 GGYASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 96
G Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKI
Sbjct: 259 GMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 318
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
P GKGCGFVQF R AE A++++ G IG VRLSWGR+
Sbjct: 319 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 359
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 161 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALS 220
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
++ G G + +R+S P NK SL
Sbjct: 221 EMQGVYCGNRPMRIS-TATPKNKGPSL 246
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 46 YASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 98
Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 282 YPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 341
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 342 GKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 383
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 183 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALS 242
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 243 EMQGVYCGNRPMRIS-TATPKNK 264
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 52 PGQGPQSE------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 105
PG GP + D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 256 PGFGPMAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 315
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
QF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 316 QFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 350
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
Query: 44 GGYASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 96
G Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKI
Sbjct: 258 GMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 317
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
P GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 318 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 361
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F +++ S KI P+ +G GFV+F++ + + AL
Sbjct: 161 SIFVGDLGPEVNEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALT 220
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSP 147
++ G G + +R+S P NK + P
Sbjct: 221 EMQGVYCGNRPMRISTA-TPKNKGPGVVP 248
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 46 YASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 98
Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 259 YPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 318
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 319 GKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 360
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 160 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALS 219
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 220 EMQGVYCGNRPMRIS-TATPKNK 241
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 103
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGY 108
Query: 104 -FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
FV F++ A +AL LNGT + + +L+W
Sbjct: 109 CFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNW 141
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
AP E D +NTT+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R
Sbjct: 200 APVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTR 259
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTS 150
+AE+A+ ++ G VIG+Q +++SWG +Q S +++
Sbjct: 260 ASAEDAIQRMQGKVIGQQVIQISWGSTLTARQMDPSQWSA 299
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 58 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 109
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFAD 148
Query: 110 RENAEEALHKLNGTVIGKQSVRLS 133
A+ ++NG + +R+S
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMRIS 172
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 120 LNGTVI--GKQSVRLSWG 135
NG + Q+ RL+W
Sbjct: 71 FNGAQMPGTDQTFRLNWA 88
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 45 GYASNGAPGQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 101
GYA AP Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 237 GYAQPAAPFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 296
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
CGFVQF +R AE A++++ G IG VRLSWGR+
Sbjct: 297 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRS 332
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI +G GFV+F++ + + AL
Sbjct: 135 SIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALV 194
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 195 EMQGVYCGNRPMRIS 209
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 265 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 324
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 325 QGYPIGNSRVRLSWGRSQNN 344
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI +G GFV+F++ + AL
Sbjct: 135 SIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESEQQRALV 194
Query: 119 KLNGTVIGKQSVRLS 133
++ G G +++R+S
Sbjct: 195 EMQGVYCGNRAMRIS 209
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 165 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 224
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 225 QGYPIGNSRVRLSWGRSQNN 244
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 29 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALS 88
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 89 EMQGVYCGNRPMRISTA-TPKNK 110
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 58/77 (75%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +N+TIF+G L +T++DLR+ F +GEI KIP GK CGFVQF +R++AE A+ ++
Sbjct: 235 DPTNSTIFIGALPATMTNDDLRKHFLPFGEIVYTKIPFGKRCGFVQFIHRQSAEMAIQEM 294
Query: 121 NGTVIGKQSVRLSWGRN 137
+G VIG ++RLSWGR+
Sbjct: 295 DGKVIGGSALRLSWGRS 311
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPVG------KGCGFVQFANRENAEEALH 118
+IFVG L + D L Q F + Y + S ++ + KG GFV+F + + +++L
Sbjct: 105 SIFVGDLAHEINDILLMQVFHERYPSVKSARVVIDPTTGSPKGYGFVRFGSEADQQQSLV 164
Query: 119 KLNGTVIGKQSVRLS 133
L G +IG + VR+S
Sbjct: 165 DLQGQMIGSRPVRVS 179
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFAN 109
P+S G S T+++G L P + + +RQ + GE +VK+ K G FV+F++
Sbjct: 6 PESSGGS---TLWMGDLLPWMDEHFIRQTWRLLGESVTVKMIKDKSTGSLAGYCFVEFSS 62
Query: 110 RENAEEALHKLNGTVI 125
+ A + L +NGT+I
Sbjct: 63 SDVAAKLLELVNGTLI 78
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 53/76 (69%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P VT+++LR F +G I VKIP GKGCGFVQ+ R +AE A+ K+
Sbjct: 323 DPNNTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQYVERSSAETAITKM 382
Query: 121 NGTVIGKQSVRLSWGR 136
G I VRLSWGR
Sbjct: 383 QGFPIANSRVRLSWGR 398
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L P+VT+ L F ++Y K+ + KG GFV+F + + +
Sbjct: 188 TNNSIFVGDLAPSVTEAQLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQR 247
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 248 ALVEMQGCFLNGRAIKI 264
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 46 YASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 98
Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 260 YPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 319
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 320 GKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 361
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 161 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALS 220
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 221 EMQGVYCGNRPMRIS-TATPKNK 242
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 45 GYASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 97
G S GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 277 GMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP 336
Query: 98 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 337 PGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 379
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F ++Y S KI P+ +G GFV+FA+ + ++ALH
Sbjct: 176 SIFVGDLGPEVNEYVLMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKALH 235
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 236 EMQGVYCGNRPMRIS-TATPKNK 257
>gi|347840237|emb|CCD54809.1| hypothetical protein [Botryotinia fuckeliana]
Length = 218
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 103 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 162
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 163 QGYPIGNSRVRLSWGRSQNN 182
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 265 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 324
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 325 QGYPIGNSRVRLSWGRSQNN 344
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI +G GFV+F++ + + AL
Sbjct: 135 SIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADMQRALV 194
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 195 EMQGVYCGNRPMRIS 209
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 297 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 356
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 357 QGYPIGNSRVRLSWGRSQNN 376
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 174 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 233
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 234 EMQGVYCGNRPMRISTA-TPKNK 255
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 535 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 594
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 595 QGYPIGNSRVRLSWGRSQNN 614
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F +++ S KI P+ +G GFV+FA+ + + AL
Sbjct: 400 SIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEGDQQRALT 459
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 460 EMQGVYCGNRPMRISTA-TPKNK 481
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 305 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 364
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 365 QGYPIGNSRVRLSWGRSQNN 384
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG 99
GG A +GP+ +IFVG L P V + L F +Y S KI P+
Sbjct: 161 GGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLFQGKYNSCKSAKIMSDPIS 213
Query: 100 ---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
+G GFV+F++ ++ ++ALH++ G G + +R+S P NK
Sbjct: 214 GMSRGYGFVRFSDEQDQQKALHEMQGVYCGNRPMRIS-TATPKNK 257
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P +++E LR F+ +GEI VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 561 DPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKADAERAIEKM 620
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 621 QGFPIGGSRIRLSWGRS 637
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 58/85 (68%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
PGQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R
Sbjct: 281 PGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRH 340
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGR 136
AE A++++ G IG VRLSWGR
Sbjct: 341 AAEMAINQMQGYPIGNSRVRLSWGR 365
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 276 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 335
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 336 QGYPIGNSRVRLSWGRSQNN 355
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 268 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 327
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 328 QGYPIGNSRVRLSWGRSQNN 347
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 56/77 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 300 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 359
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 360 QGYPIGNSRVRLSWGRS 376
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 46 YASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 98
Y GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 260 YPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 319
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 320 GKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 361
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F +++ S KI P+ +G GFV+F++ + + AL
Sbjct: 161 SIFVGDLGPEVNEYVLVSLFQNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALT 220
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 221 EMQGVYCGNRPMRIS-TATPKNK 242
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 265 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 324
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 325 QGYPIGNSRVRLSWGRSQNN 344
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI +G GFV+F++ + + AL
Sbjct: 134 SIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADQQRALV 193
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 194 EMQGVYCGNRPMRIS 208
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 56/77 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 268 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 327
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 328 QGYPIGNSRVRLSWGRS 344
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
AP E D +NTT+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R
Sbjct: 200 APVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTR 259
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
+AE+A+ ++ G VIG+Q +++SWG + +Q
Sbjct: 260 VSAEDAIQRMQGKVIGQQVIQISWGSSMTARQ 291
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 58 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 109
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFAD 148
Query: 110 RENAEEALHKLNGTVIGKQSVRLS 133
A+ ++NG + +R+S
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMRIS 172
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 120 LNGTVI--GKQSVRLSWG 135
NG + +Q+ RL+W
Sbjct: 71 YNGAQMPGTEQTFRLNWA 88
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 292 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 351
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 352 QGYPIGNSRVRLSWGRSQNN 371
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ E+ ++AL
Sbjct: 166 SIFVGDLGPEVTEFVLVQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALT 225
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 226 EMQGVYCGNRPMRIS-TATPKNK 247
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 283 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 342
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 343 QGYPIGNSRVRLSWGRSQNN 362
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 160 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 219
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 220 EMQGVYCGNRPMRIS-TATPKNK 241
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG---- 103
++G P G + + TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 48 ASGEPASGSAQQAGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAG 107
Query: 104 --FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
FV F A +AL L+GT I S +L+W
Sbjct: 108 YCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 263 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 322
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 323 QGYPIGNSRVRLSWGRSQNN 342
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 296 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 355
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 356 QGYPIGNSRVRLSWGRSQNN 375
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F +Y S KI P+ +G GFV+FA+ ++ ++ALH
Sbjct: 167 SIFVGDLGPEVNEYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALH 226
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQAS 144
++ G G + +R+S P NK +
Sbjct: 227 EMQGVYCGNRPMRIS-TATPKNKSGA 251
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 334 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 393
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 394 QGYPIGNSRVRLSWGRSQNN 413
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 48 SNGAPGQG------PQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK 100
+NG P G P D S TT+++G L+P + + ++ F S GE +VK+ K
Sbjct: 84 ANGTPPSGDMSAPPPTGSSDQSKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDK 143
Query: 101 GCG-----FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
G FV+F N + A +AL LNG + S +L+W
Sbjct: 144 NSGNAGYCFVEFQNADAASKAL-GLNGNPVPNSSRQFKLNW 183
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 279 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 338
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 339 QGYPIGNSRVRLSWGRSQNN 358
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 56/77 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 268 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 327
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 328 QGYPIGNSRVRLSWGRS 344
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 307 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 366
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 367 QGYPIGNSRVRLSWGRSQNN 386
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 184 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 243
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 244 EMQGVYCGNRPMRISTA-TPKNK 265
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
Query: 45 GYASNGAPGQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 97
G S GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 288 GMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP 347
Query: 98 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 348 PGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 390
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F ++Y S KI P+ +G GFV+FA+ ++ ++ALH
Sbjct: 178 SIFVGDLGPEVNEYVLMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALH 237
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 238 EMQGVYCGNRPMRIS 252
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 194 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 253
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 254 QGYPIGNSRVRLSWGRSQNN 273
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 49 NGAPGQGPQSEGDSSNT--TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG--- 99
N A G G Q D +IFVG L P V + L F +Y S KI P+
Sbjct: 50 NWASGGGLQDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMS 109
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
+G GFV+F++ + AL+++ G G + +R+S P NK
Sbjct: 110 RGYGFVRFSDESEQQRALNEMQGVYCGNRPMRISTA-TPKNK 150
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 252 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 311
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 312 QGYPIGNSRVRLSWGRSQNN 331
>gi|327296686|ref|XP_003233037.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
gi|326464343|gb|EGD89796.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
Length = 224
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 105 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 164
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 165 QGYPIGNSRVRLSWGRS 181
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 231 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 290
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 291 QGYPIGNSRVRLSWGRSQNN 310
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI PV +G GFV+F++ + + AL
Sbjct: 137 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPVSGMSRGYGFVRFSDEMDQQRALT 196
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSP 147
++ G G + +R+S P NK A+ P
Sbjct: 197 EMQGVYCGNRPMRISTA-TPKNKSATGGP 224
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 33 QFNIVFLLVLIGGYASNGAPGQGPQSEGDSSN--------TTIFVGGLDPNVTDEDLRQP 84
Q++ G + GA GP SSN TT+++G L+P + + +R
Sbjct: 4 QYDYPQQQQQQGSASPTGASAGGPPPTAGSSNGAAGSDAKTTLWMGELEPWIDEAFVRNV 63
Query: 85 FSQYGEIASVKIPVGKGCG-----FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
+ Q GE +VK+ K G FV F++ A +AL LN T I S +L+W
Sbjct: 64 WYQLGEGVNVKMIRDKFSGNAGYCFVDFSSPAAAAKAL-TLNATPIPGSSRPFKLNW 119
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 344 QGYPIGNSRVRLSWGRSQNN 363
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 51 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 101
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 102 CG------FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
G FV F++ A +AL L+GT I S +L+W
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 160 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 219
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 220 EMQGVYCGNRPMRIS-TATPKNK 241
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 275 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 334
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 335 QGYPIGNSRVRLSWGRSQNN 354
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 277 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 336
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 337 QGYPIGNSRVRLSWGRSQNN 356
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F +++ S KI P+ +G GFV+FA+ ++ + AL
Sbjct: 142 SIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEQDQQRALT 201
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 202 EMQGVYCGNRPMRIS-TATPKNK 223
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 344 QGYPIGNSRVRLSWGRSQNN 363
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 51 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 101
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 102 CG------FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
G FV F++ A +AL L+GT I S +L+W
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 160 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 219
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 220 EMQGVYCGNRPMRIS-TATPKNK 241
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 344 QGYPIGNSRVRLSWGRSQNN 363
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 51 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 101
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 102 CG------FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
G FV F++ A +AL L+GT I S +L+W
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 160 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 219
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 220 EMQGVYCGNRPMRIS-TATPKNK 241
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 274 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 333
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 334 QGYPIGNSRVRLSWGRSQNN 353
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 252 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 311
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 312 QGYPIGNSRVRLSWGRSQNN 331
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 283 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 342
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 343 QGYPIGNSRVRLSWGRSQNN 362
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 160 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 219
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 220 EMQGVYCGNRPMRIS-TATPKNK 241
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG---- 103
++G P +G + TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 48 ASGEPAPSSAQQGGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAG 107
Query: 104 --FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
FV F A +AL L+GT I S +L+W
Sbjct: 108 YCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 55/80 (68%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+ ++
Sbjct: 272 DPNNTTVFVGGLSSFVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAISQM 331
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 332 QGYPIGNSRVRLSWGRSQNN 351
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S+Y S KI + +G GFV+F++ + AL
Sbjct: 161 SIFVGDLGPEVNEYLLVSLFQSRYPSCKSAKIMTDLVSGMSRGYGFVRFSDEVDQRRALT 220
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 221 EMQGVYCGSRPIRISTA-TPKNK 242
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 118
T +++G L+P V + +RQ + GE +VK+ K G FV F++ A +AL
Sbjct: 67 TALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIRDKFSGSNAGYCFVDFSSTAAASKAL- 125
Query: 119 KLNGTVIGKQS--VRLSWG 135
LNGT+I + +L+W
Sbjct: 126 SLNGTIIPGTTRLFKLNWA 144
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 284 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 343
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 344 QGYPIGNSRVRLSWGRS 360
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI + +G GFV+F++ + + AL
Sbjct: 158 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPLSGMSRGYGFVRFSDEGDQQRALT 217
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 218 EMQGVYCGNRPMRISTA-TPKNK 239
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 269 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 328
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 329 QGYPIGNSRVRLSWGRSQNN 348
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 299 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 358
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 359 QGYPIGNSRVRLSWGRSQNN 378
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 270 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 329
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 330 QGYPIGNSRVRLSWGRSQNN 349
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 312 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 371
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 372 QGYPIGNSRVRLSWGRSQNN 391
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 176 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALS 235
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 236 EMQGVYCGNRPMRIS-TATPKNK 257
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 277 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 336
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 337 QGYPIGNSRVRLSWGRS 353
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG 99
GG A G +GP+ +IFVG L P V + L F S++ S KI P+
Sbjct: 139 GGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPIS 191
Query: 100 ---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 133
+G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 192 GMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIS 228
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 50 GAPGQ----GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-- 103
G PG+ PQ GD TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 41 GTPGEPSAAAPQQGGDG-KTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSN 99
Query: 104 ----FVQFANRENAEEALHKLNGTVIGK--QSVRLSW 134
FV F++ A +AL LNGT + ++ +L+W
Sbjct: 100 AGYCFVDFSSAAAAGKAL-SLNGTPMPNTTRAFKLNW 135
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 56/80 (70%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+
Sbjct: 223 TSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAI 282
Query: 118 HKLNGTVIGKQSVRLSWGRN 137
K+ G IG +RLSWGR+
Sbjct: 283 EKMQGFPIGGSRIRLSWGRS 302
>gi|115385346|ref|XP_001209220.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196912|gb|EAU38612.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 306
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 183 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 242
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 243 QGYPIGNSRVRLSWGRS 259
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 58/85 (68%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
PGQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R
Sbjct: 281 PGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRH 340
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGR 136
AE A++++ G IG VRLSWGR
Sbjct: 341 AAEMAINQMQGYPIGNSRVRLSWGR 365
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 299 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 358
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 359 QGYPIGNSRVRLSWGRSQNN 378
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F +++ S KI P+ +G GFV+FA + + AL
Sbjct: 165 SIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALT 224
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSP 147
++ G G + +R+S P NK P
Sbjct: 225 EMQGVYCGNRPMRIS-TATPKNKSGGAGP 252
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 297 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 356
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 357 QGYPIGNSRVRLSWGRSQNN 376
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQF 107
GQG + S TT+++G L+P + + +R + GE +VK+ K G F+ F
Sbjct: 63 GQGGSTGAADSKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGNAGYCFIDF 122
Query: 108 ANRENAEEALHKLNGTVIGKQS--VRLSW 134
E A +AL LNG++I S +L+W
Sbjct: 123 TTPEAAAKAL-SLNGSMIPNTSRPFKLNW 150
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 168 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEGDQQRALT 227
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 228 EMQGVYCGNRPMRISTA-TPKNK 249
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 492 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 551
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 552 QGFPIGGSKIRLSWGRS 568
>gi|254577373|ref|XP_002494673.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
gi|238937562|emb|CAR25740.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
Length = 558
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL V +++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 279 DPNNTTVFVGGLSSLVAEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRISAETAIAKM 338
Query: 121 NGTVIGKQSVRLSWGRNPANKQAS 144
G IG VRLSWGR + KQA+
Sbjct: 339 QGFPIGNSRVRLSWGR--SAKQAA 360
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
++FVG L PNVT+ L + F S++ + VKI V KG FV+F N + + AL
Sbjct: 146 SVFVGDLAPNVTESQLFELFISRFNSTSHVKIVYDQLTGVSKGYAFVKFTNPAHQQRALL 205
Query: 119 KLNGTVIGKQSVRLS 133
++ G + +++R+S
Sbjct: 206 EMQGIFLSGRAIRVS 220
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 285 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 344
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 345 QGYPIGNSRVRLSWGRS 361
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 161 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 220
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSP 147
++ G G + +R+S P NK S +P
Sbjct: 221 EMQGVYCGNRPMRIS-TATPKNKGPSGAP 248
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 277 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 336
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 337 QGYPIGNSRVRLSWGRSQNN 356
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG 99
GG A G +GP+ +IFVG L P V + L F S++ S KI P+
Sbjct: 139 GGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPIS 191
Query: 100 ---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
+G GFV+F++ + + AL ++ G G + +R+S P NK
Sbjct: 192 GMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIS-TATPKNK 235
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 277 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 336
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 337 QGYPIGNSRVRLSWGRSQNN 356
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG 99
GG A G +GP+ +IFVG L P V + L F S++ S KI P+
Sbjct: 139 GGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPIS 191
Query: 100 ---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
+G GFV+F++ + + AL ++ G G + +R+S P NK
Sbjct: 192 GMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIS-TATPKNK 235
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR+ F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 240 DPNNTTVFVGGLSSLVTEDELREYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAISKM 299
Query: 121 NGTVIGKQSVRLSWGR 136
G I +RLSWGR
Sbjct: 300 QGFPIANSRIRLSWGR 315
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 41 VLIGGYASNGAPGQGPQSEGDSSN-TTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP- 97
+LI GY Q+ ++SN +IFVG L PNVT+ L F ++Y KI
Sbjct: 88 MLIPGYGGKRLKLNWAQASSNASNGYSIFVGDLSPNVTEAQLFDLFINKYASTDHAKIVY 147
Query: 98 -----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 132
V +G GFV+F + + + AL ++ G + +++++
Sbjct: 148 DQATGVSRGYGFVRFNSLMDQQHALLEMQGIFLNGRAIKI 187
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 56/80 (70%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+
Sbjct: 253 TSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAI 312
Query: 118 HKLNGTVIGKQSVRLSWGRN 137
K+ G IG +RLSWGR+
Sbjct: 313 EKMQGFPIGGSRIRLSWGRS 332
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 285 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 344
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 345 QGYPIGNSRVRLSWGRS 361
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 161 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 220
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSP 147
++ G G + +R+S P NK S +P
Sbjct: 221 EMQGVYCGNRPMRIS-TATPKNKGPSGAP 248
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 274 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 333
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 334 QGYPIGNSRVRLSWGRS 350
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F ++ S KI P+ +G GFV+FA+ + + AL
Sbjct: 151 SIFVGDLGPEVNEFVLVSLFQGRFQSCKSAKIMTDPISGMSRGYGFVRFADEMDQQRALT 210
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 211 EMQGVYCGNRPMRISTA-TPKNK 232
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 54/76 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 285 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 344
Query: 121 NGTVIGKQSVRLSWGR 136
G IG VRLSWGR
Sbjct: 345 QGYPIGNSRVRLSWGR 360
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
++FVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ ++ ++AL
Sbjct: 158 SVFVGDLGPEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALT 217
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 218 EMQGVYCGNRPMRIS 232
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 282 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 341
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 342 QGYPIGNSRVRLSWGRSQNN 361
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ + ++AL
Sbjct: 155 SIFVGDLGPEVTEFVLVQLFQNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALT 214
Query: 119 KLNGTVIGKQSVRLS 133
+ G G + +R+S
Sbjct: 215 DMQGVYCGNRPMRIS 229
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 47 ASNGAPGQG----PQSEG-----DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 97
+ NG P QG P S G + TT+++G L+P + + +R + GE +VK+
Sbjct: 34 SGNGFPPQGNMGPPGSAGGDGQPSAGKTTLWMGELEPWIDENFVRSIWYNMGETVNVKMI 93
Query: 98 VGKGCG-----FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 134
K G FV F+ E A +AL LNG +I + +L+W
Sbjct: 94 RDKFSGNAGYCFVDFSTPEAAAKAL-SLNGQLIPNSNRPFKLNW 136
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 339
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 340 QGYPIGNSRVRLSWGRSQNN 359
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGKGCG 103
GY N GP + D + TT+++G L+P + + ++ F + GE +VK+ K G
Sbjct: 31 GYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRDKSSG 90
Query: 104 -----FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
FV+F + + A +AL LNGT + + +L+W
Sbjct: 91 NAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNW 127
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 273 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 332
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 333 QGYPIGNSRVRLSWGRSQNN 352
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 54/76 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 304 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 363
Query: 121 NGTVIGKQSVRLSWGR 136
G IG VRLSWGR
Sbjct: 364 QGYPIGNSRVRLSWGR 379
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
++FVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ ++ ++AL
Sbjct: 177 SVFVGDLGPEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALT 236
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 237 EMQGVYCGNRPMRIS 251
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 292 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 351
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 352 QGYPIGNSRVRLSWGRSQNN 371
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F +Y S KI P+ +G GFV+FA+ + ++ALH
Sbjct: 166 SIFVGDLGPEVNEYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALH 225
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 226 EMQGVYCGNRPMRIS 240
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 51 APGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----- 103
P QGP ++G TT+++G L+P + + +R + G +VK+ K G
Sbjct: 55 GPAQGPPGSAQGGDQKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGY 114
Query: 104 -FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 134
FV F N E+A AL +LNG VI + +L+W
Sbjct: 115 CFVDFENPESATRAL-QLNGQVIPNSNRQFKLNW 147
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 62/92 (67%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
AP E D +NTT+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R
Sbjct: 200 APVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTR 259
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
+AE+A+ ++ G VIG+Q +++SWG +Q
Sbjct: 260 ASAEDAIQRMQGKVIGQQVIQISWGSTLTARQ 291
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 58 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 109
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFAD 148
Query: 110 RENAEEALHKLNGTVIGKQSVRLS 133
A+ ++NG + +R+S
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMRIS 172
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 120 LNGTVI--GKQSVRLSWG 135
NG + Q+ RL+W
Sbjct: 71 FNGAQMPGTDQTFRLNWA 88
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 293 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 352
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 353 QGYPIGNSRVRLSWGRSQNN 372
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 157 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALS 216
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 217 EMQGVYCGNRPMRIS-TATPKNK 238
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
Query: 45 GYASNGAPGQG-----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 96
G S GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKI
Sbjct: 264 GMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 323
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
P GKGCGFVQF R AE A++++ G IG VRLSWGR
Sbjct: 324 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 363
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ E+ ++AL
Sbjct: 161 SIFVGDLGPEVTEFVLVQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALT 220
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 221 EMQGVYCGNRPMRIS 235
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A++++
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQM 339
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 340 QGYPIGNSRVRLSWGRSQNN 359
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGKGCG 103
GY N GP + D + TT+++G L+P + + ++ F + GE +VK+ K G
Sbjct: 31 GYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRDKSSG 90
Query: 104 -----FVQFANRENAEEALHKLNGTVIGKQS--VRLSW 134
FV+F + + A +AL LNGT + + +L+W
Sbjct: 91 NAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNW 127
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 281 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 340
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG VRLSWGR+
Sbjct: 341 QGYPIGNSRVRLSWGRS 357
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 157 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALT 216
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 217 EMQGVYCGNRPMRIS 231
>gi|392568189|gb|EIW61363.1| hypothetical protein TRAVEDRAFT_26986 [Trametes versicolor
FP-101664 SS1]
Length = 950
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ D NTT+FVGGL P + ++ LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 613 TSSDPYNTTVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 672
Query: 118 HKLNGTVIGKQSVRLSWGRN 137
K+ G IG +RLSWGR+
Sbjct: 673 EKMQGFPIGGSRIRLSWGRS 692
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
Query: 45 GYASNGAPGQG-----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 96
G S GAP G PQ D +NTT+FVGGL VT+++LR F +GEI VKI
Sbjct: 261 GMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 320
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
P GKGCGFVQF R AE A++++ G IG VRLSWGR
Sbjct: 321 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 360
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ E+ ++AL
Sbjct: 158 SIFVGDLGPEVTEFVLVQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALT 217
Query: 119 KLNGTVIGKQSVRLS 133
++ G G + +R+S
Sbjct: 218 EMQGVYCGNRPMRIS 232
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 339
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 340 QGYPIGNSRVRLSWGRSQNN 359
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 156 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALT 215
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 216 EMQGVYCGNRPMRIS-TATPKNK 237
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 339
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 340 QGYPIGNSRVRLSWGRSQNN 359
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
+IFVG L P V + L F S++ S KI P+ +G GFV+F++ + + AL
Sbjct: 156 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALT 215
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
++ G G + +R+S P NK
Sbjct: 216 EMQGVYCGNRPMRIS-TATPKNK 237
>gi|395329881|gb|EJF62266.1| hypothetical protein DICSQDRAFT_135856 [Dichomitus squalens
LYAD-421 SS1]
Length = 973
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 56/80 (70%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ D NTT+FVGGL P ++++ LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 621 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 680
Query: 118 HKLNGTVIGKQSVRLSWGRN 137
K+ G IG +RLSWGR+
Sbjct: 681 EKMQGFPIGGSRIRLSWGRS 700
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P +++E LR F+ +G+I VK+P+GK CGFVQF + +AE A+ K+
Sbjct: 574 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCGFVQFVRKADAERAIEKM 633
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 634 QGFPIGGSRIRLSWGRS 650
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 577 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 636
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 637 QGFPIGGSRIRLSWGRS 653
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
PGQ D +NTT+FVGGL VT+++LR F +GEI V+IP GKGCGFVQF +R
Sbjct: 276 PGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVQIPPGKGCGFVQFVHRH 335
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGR 136
AE A++++ G IG VRLSWGR
Sbjct: 336 AAEMAINQMQGYPIGNSRVRLSWGR 360
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGKGCG-----FVQ 106
GQ P +GD++ T+++G L+P + + ++ F + GE +VK+ K G FV+
Sbjct: 46 GQAP-IQGDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNAGYCFVE 104
Query: 107 FANRENAEEALHKLNGTVI--GKQSVRLSW 134
F + + A +AL +LNGT + ++ +L+W
Sbjct: 105 FTSSDAASKAL-QLNGTPVPNSNRAFKLNW 133
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 255 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 314
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 315 QGFPIGGSRIRLSWGRS 331
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +G+I VKIP GKGCGFVQF +R AE A++++
Sbjct: 275 DPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAINQM 334
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 335 QGYPIGNSRVRLSWGRSQNN 354
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+++LR F +G+I VKIP GKGCGFVQF +R AE A++++
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAINQM 339
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G IG VRLSWGR+ N
Sbjct: 340 QGYPIGNSRVRLSWGRSQNN 359
>gi|390601667|gb|EIN11061.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 877
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P ++++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 533 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 592
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 593 QGFPIGGSRIRLSWGRS 609
>gi|302696241|ref|XP_003037799.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
gi|300111496|gb|EFJ02897.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
Length = 759
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P ++++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 542 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAENAIEKM 601
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 602 QGFPIGGSRIRLSWGRS 618
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Query: 55 GPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
GP E D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF +
Sbjct: 600 GPNGEQLTSSDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRK 659
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
+AE A+ K+ G IG +RLSWGR+
Sbjct: 660 PDAERAIEKMQGFPIGGSRIRLSWGRS 686
>gi|365984507|ref|XP_003669086.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
gi|343767854|emb|CCD23843.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
Length = 498
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+E LR F +G I VKIP+GKGCGFVQ+ +R +AE A+ ++
Sbjct: 322 DPNNTTVFVGGLSSMVTEEQLRHCFQPFGTIIYVKIPIGKGCGFVQYFDRISAETAILRM 381
Query: 121 NGTVIGKQSVRLSWGR 136
G IG +RLSWGR
Sbjct: 382 QGFPIGNSRIRLSWGR 397
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL V+++DLRQ F +G+I VKIP GKGCGFVQ+ +R +AE A+ K+
Sbjct: 279 DPNNTTVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDRLSAELAISKM 338
Query: 121 NGTVIGKQSVRLSWGR 136
G + +RLSWGR
Sbjct: 339 QGFPLANSRIRLSWGR 354
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 25/130 (19%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE-------IASVKIPV 98
YA GA ++ ++ ++ +++G LDPN + +RQ + GE + + + V
Sbjct: 34 YAGGGA------TDYNTGSSQLYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGV 87
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVI---GKQSVRLSWGRNPANKQAS--------LSP 147
+G FV+F + E+ AL K NG VI ++ ++L+W AN S LSP
Sbjct: 88 NQGYCFVEFPSMEHGNNALLK-NGIVIPGFPQRRLKLNWASAGANGNNSGFSVFVGDLSP 146
Query: 148 FTSSTQFKKI 157
+ Q ++
Sbjct: 147 NVTEAQLFEL 156
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDL------RQPFSQYGEIASVKIP-VGKGCGFVQFANR 110
+ G++S ++FVG L PNVT+ L R P + + ++ ++ V K GFV+F +
Sbjct: 130 ANGNNSGFSVFVGDLSPNVTEAQLFELFIGRYPSTCHAKVVHDQLTGVSKCYGFVKFNSA 189
Query: 111 ENAEEALHKLNGTVIGKQSVRL 132
+ + L ++ G + +S+++
Sbjct: 190 TDQQRVLVEMQGVFLNGRSIKV 211
>gi|238600700|ref|XP_002395212.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
gi|215465560|gb|EEB96142.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
Length = 200
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P + ++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 113 DPYNTTVFVGGLSPLINEDTLRTFFAPFGDIHYVKVPVGKNCGFVQFVRKADAERAIEKM 172
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 173 QGFPIGGSRIRLSWGRS 189
>gi|343427154|emb|CBQ70682.1| related to NAM8-meiotic recombination protein [Sporisorium
reilianum SRZ2]
Length = 968
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S D +NTT+FVGGL +++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 572 SAADPNNTTVFVGGLSSLISEATLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 631
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
++NG I +RLSWGR+ +K
Sbjct: 632 QRMNGFPILNSKIRLSWGRSQGDK 655
>gi|444322688|ref|XP_004181985.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
gi|387515031|emb|CCH62466.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
Length = 674
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL V++ +LR F +G I VKIPVGKGCGFVQ+ +R AE A+ K+
Sbjct: 336 DPNNTTVFIGGLSSLVSEGELRSYFQPFGTIVYVKIPVGKGCGFVQYVDRSAAETAISKM 395
Query: 121 NGTVIGKQSVRLSWGR 136
G IG +RLSWGR
Sbjct: 396 QGFPIGNSRIRLSWGR 411
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI------PVGKGCGFVQFANRENAEEALH 118
++FVG L PNVT+ L F ++Y KI V KG GFV+F N + + +L+
Sbjct: 174 SVFVGDLAPNVTEAQLFDLFINRYSSTIHAKIVYDQMTNVSKGYGFVRFNNSADQQRSLN 233
Query: 119 KLNGTVIGKQSVRLS 133
++ G + +S+R+S
Sbjct: 234 EMQGVFLNGRSIRVS 248
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL +V ++ L F Q+G I +KIP GK CGFV++ NRE+AEEA+ +
Sbjct: 324 DPNNTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASM 383
Query: 121 NGTVIGKQSVRLSWGR 136
G +IG VRLSWGR
Sbjct: 384 QGFIIGGNRVRLSWGR 399
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL +V ++ L F Q+G I +KIP GK CGFV++ NRE+AEEA+ +
Sbjct: 324 DPNNTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASM 383
Query: 121 NGTVIGKQSVRLSWGR 136
G +IG VRLSWGR
Sbjct: 384 QGFIIGGNRVRLSWGR 399
>gi|71005504|ref|XP_757418.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
gi|46096901|gb|EAK82134.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
Length = 1059
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 59/84 (70%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S D +NTT+FVGGL +++ LR+ F +GEI+ VKIP GKGCGFVQ+ +++AE A+
Sbjct: 614 SAADPNNTTVFVGGLSSLISEVTLRRYFEHFGEISYVKIPPGKGCGFVQYVRKQDAETAI 673
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
++NG I +RLSWGR+ +K
Sbjct: 674 QRMNGFPILNSKIRLSWGRSQGDK 697
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 56/77 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +N+T+FVGGL V++E L F +G I+S+KIP GKGCGFV+F+ RE AE A+ +
Sbjct: 274 DPTNSTVFVGGLAAGVSEETLFTLFEPFGSISSIKIPRGKGCGFVKFSTREEAENAISGM 333
Query: 121 NGTVIGKQSVRLSWGRN 137
+G +IG VRLSWGR+
Sbjct: 334 HGFLIGGSRVRLSWGRS 350
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 118
++FVG L P+ T+ L F Y I SV++ G FV+F E+ + ALH
Sbjct: 157 SLFVGDLSPSTTEAHLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALH 216
Query: 119 KLNGTVIGKQSVRLS 133
+++G +G + +R++
Sbjct: 217 EMSGIWLGGRPIRVA 231
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----------------GCGFVQFA 108
T+++G L+P +E++ Q + Q G+ VK+ + G FV+F
Sbjct: 53 TLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVEFE 112
Query: 109 NRENAEEALHKLNGTVIGKQS---VRLSWGRNP 138
E+A +AL LNG+++ + S RL+W P
Sbjct: 113 RHEDALQAL-ALNGSIVPRSSGRLFRLNWASGP 144
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 48 SNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
SN P P Q D++NTT+F+GGL +++ L F +G I SVK+P G+GCGFV+
Sbjct: 308 SNSLPLAAPRQLPADTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVR 367
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F NR +AE A+ + G ++G ++RLSWGR
Sbjct: 368 FENRMDAEAAIQGMQGFIVGGNAIRLSWGRT 398
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 48 SNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
SN P P Q D++NTT+F+GGL +++ L F +G I SVK+P G+GCGFV+
Sbjct: 308 SNSLPLAAPRQLPADTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVR 367
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F NR +AE A+ + G ++G ++RLSWGR
Sbjct: 368 FENRMDAEAAIQGMQGFIVGGNAIRLSWGRT 398
>gi|449549395|gb|EMD40360.1| hypothetical protein CERSUDRAFT_110955 [Ceriporiopsis subvermispora
B]
Length = 709
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ D NTT+FVGGL P ++++ LR F+ +G+I VK+P GK CGFVQF + +AE A+
Sbjct: 382 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKPDAERAI 441
Query: 118 HKLNGTVIGKQSVRLSWGRN 137
K+ G IG +RLSWGR+
Sbjct: 442 EKMQGFPIGGSRIRLSWGRS 461
>gi|50292159|ref|XP_448512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527824|emb|CAG61473.1| unnamed protein product [Candida glabrata]
Length = 802
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P V ++ LR+ F +G I S+KIP GK CGFV+F ++ +AE A+ L
Sbjct: 463 DPTNTTVFVGGLGPTVQEQQLRKIFQPFGNILSIKIPPGKNCGFVKFEHKIDAEAAIQGL 522
Query: 121 NGTVIGKQSVRLSWGRN 137
G V+ + +RLSWGRN
Sbjct: 523 QGFVLVENPIRLSWGRN 539
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVGKGC---GFVQFANRENAEEALH 118
++FVG L P T+ DL F +++ + +V++ P+ GFV+F N E AL
Sbjct: 235 SLFVGDLSPTATEADLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFGNEEERRRALI 294
Query: 119 KLNGTVIGKQSVRLSWG 135
++NG +++R+++
Sbjct: 295 EMNGVHFQGRTLRVAYA 311
>gi|401625439|gb|EJS43448.1| nam8p [Saccharomyces arboricola H-6]
Length = 527
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 313 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAISGM 372
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR + KQ +L
Sbjct: 373 QGFPIANSRVRLSWGR--SAKQTAL 395
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N +
Sbjct: 165 NNYSIFVGDLAPNVTESQLFELFINRYASASHAKIVHDQVTGMSKGYGFVKFNNADEQHL 224
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 225 ALSEMQGVFLNGRAIKV 241
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 55/76 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D SNTT+F+GGL+ +T+ L+ F +G I SVK+P GKGCGFV+F +R +AE A+ +
Sbjct: 394 DPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAIQGM 453
Query: 121 NGTVIGKQSVRLSWGR 136
G ++G ++RLSWGR
Sbjct: 454 QGFIVGNSAIRLSWGR 469
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 54/86 (62%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
G P D NTT+FVGGL P +++E LR F+ +G I VK+P GK CGFVQF + +
Sbjct: 390 GNDPLVPSDPQNTTVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSD 449
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNP 138
AE A+ L+G I VRLSWGR P
Sbjct: 450 AERAIEALSGFSIAGSKVRLSWGRIP 475
>gi|259146840|emb|CAY80096.1| Nam8p [Saccharomyces cerevisiae EC1118]
gi|323348251|gb|EGA82500.1| Nam8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 523
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|349578638|dbj|GAA23803.1| K7_Nam8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298893|gb|EIW09988.1| Nam8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|151944033|gb|EDN62326.1| RNA-binding protein [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L NVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAANVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|256269427|gb|EEU04722.1| Nam8p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|323308830|gb|EGA62067.1| Nam8p [Saccharomyces cerevisiae FostersO]
Length = 466
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 252 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 311
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 312 QGFPIANSRVRLSWGRSA--KQTAL 334
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 104 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 163
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 164 ALSEMQGVFLNGRAIKV 180
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 301 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 360
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR + KQ +L
Sbjct: 361 QGFPIANSRVRLSWGR--SAKQTAL 383
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 118
+IFVG L PNVT+ L F ++Y + KI + KG GFV+F N + AL
Sbjct: 153 SIFVGDLAPNVTESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALS 212
Query: 119 KLNGTVIGKQSVRL 132
++ G + +++++
Sbjct: 213 EMQGVFLNGRAIKV 226
>gi|443897314|dbj|GAC74655.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 979
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S D +NTT+FVGGL +++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 577 SAADPNNTTVFVGGLSSLISESTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 636
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
++NG I +RLSWGR+ +K
Sbjct: 637 QRMNGFPILNSKIRLSWGRSQGDK 660
>gi|443926790|gb|ELU45354.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 886
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL + +E LR F+ +GEI VKIP GKGCGFVQF + +AE A+ ++
Sbjct: 500 DPYNTTVFVGGLSGLIAEETLRGFFAPFGEIHYVKIPPGKGCGFVQFVRKADAERAIERM 559
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR
Sbjct: 560 QGYPIGGGKIRLSWGRT 576
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
P+ EG +NTT+FVGGLDP+ T+++LR F GEI SVK+P G+GCGFVQ+ ++E AE
Sbjct: 188 PEEEG--TNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEV 245
Query: 116 ALHKLNGTVI 125
A+ ++NGTVI
Sbjct: 246 AITQMNGTVI 255
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAE 114
S + +IFVG L P+VTDE L F S++ + K+ PV KG GFV+F ++E A+
Sbjct: 93 SDDHSIFVGDLAPDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGFGFVRFGSKEEAD 152
Query: 115 EALHKLNGTVIGKQSVRLS 133
+AL +NG + +R+S
Sbjct: 153 QALQTMNGVYCSSRPMRVS 171
>gi|149242856|ref|XP_001526474.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450597|gb|EDK44853.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 692
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D+SNTT+FVGGL VT+ L F +G I +KIP GK CGFV++A RE AEE + +
Sbjct: 350 DTSNTTVFVGGLSSEVTEATLFTLFKPFGTILQIKIPPGKNCGFVKYATREEAEETISAM 409
Query: 121 NGTVIGKQSVRLSWGR 136
G +IG VRLSWGR
Sbjct: 410 QGFIIGGNRVRLSWGR 425
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ++ + AE+A++ +
Sbjct: 293 DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTM 352
Query: 121 NGTVIGKQSVRLSWGRN 137
G ++G +RL+WG N
Sbjct: 353 QGALVGTSHIRLAWGHN 369
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
+IFVG L P D DL F S Y S KI V + GFV+F++ + + AL
Sbjct: 183 SIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALM 242
Query: 119 KLNGTVIGKQSVRLS 133
+ G + + +R+S
Sbjct: 243 HMQGYLCQGRPLRIS 257
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----- 103
+ P Q G + T+++G L+P + ++Q ++ E +VK+ K
Sbjct: 69 SSTPLQDVAGVGSKMSDTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLI 128
Query: 104 ---FVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 135
FVQF++ AE AL K N T+I + +L+W
Sbjct: 129 SYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWA 165
>gi|384487643|gb|EIE79823.1| hypothetical protein RO3G_04528 [Rhizopus delemar RA 99-880]
Length = 162
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 47 ASNGAPGQGPQSEGDS-----SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 101
S P Q S S ++TT+F+GGL + +++LR F+ +G+I VKIP GKG
Sbjct: 13 VSTATPKQRTSSNKQSFTSSINSTTVFIGGLSTPIKEDELRHYFAPFGDIIYVKIPQGKG 72
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
CGFVQ+ R +AE A+ ++NG IG +RLSWGR
Sbjct: 73 CGFVQYTTRSSAELAIQQMNGYQIGTSRIRLSWGR 107
>gi|2130979|dbj|BAA11919.1| csx1+ [Schizosaccharomyces pombe]
Length = 125
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ++ + AE+A++ +
Sbjct: 25 DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTM 84
Query: 121 NGTVIGKQSVRLSWGRN 137
G ++G +RL+WG N
Sbjct: 85 QGALVGTSHIRLAWGHN 101
>gi|393216132|gb|EJD01623.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 937
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL P ++++ LR F+ +G+I VK+P GK CGFVQF + +AE A+ ++
Sbjct: 575 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKADAERAIERM 634
Query: 121 NGTVIGKQSVRLSWGRN 137
G IG +RLSWGR+
Sbjct: 635 QGFPIGGSRIRLSWGRS 651
>gi|254579785|ref|XP_002495878.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
gi|238938769|emb|CAR26945.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
Length = 716
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL P + + L+ FS +G I +VKIP GK CGFV+F R +AE A+ +
Sbjct: 417 DPNNTTVFIGGLTPKINENQLQTLFSPFGNILTVKIPQGKNCGFVKFEKRIDAEAAIQGM 476
Query: 121 NGTVIGKQSVRLSWGRN 137
G V+G +RLSWGRN
Sbjct: 477 QGFVVGGCPIRLSWGRN 493
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PVGKGC---GFVQFANRENAEEALH 118
++FVG L P T+ DL F Q + + +V++ P+ GFV+F N E AL
Sbjct: 223 SLFVGDLSPTATEADLLSLFQQKFKSVKTVRVMTDPITGASRCFGFVRFGNEEERRRALV 282
Query: 119 KLNGTVIGKQSVRLSWG 135
++NG + +R+++
Sbjct: 283 EMNGVWCQGRCLRVAYA 299
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
P Q P E D NTT+FVGGL +V+++ LR F +YGEI+ VKIP GKGCGFV FA+R+
Sbjct: 107 PTQLP-GELDPQNTTLFVGGLSAHVSEDALRGVFGRYGEISYVKIPPGKGCGFVHFADRQ 165
Query: 112 NAEEALHKLNGTVIG 126
AE A+ ++NGT+IG
Sbjct: 166 AAEYAMQEVNGTIIG 180
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKIPV------GKGCGFVQFANREN 112
GD + ++FVG L P V D L F QY + S K+ + KG GFV+FA
Sbjct: 7 GDPNCFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGE 66
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQ 153
+ AL+++NG I + LS A+ ++L+P S+T
Sbjct: 67 RDRALNEMNGVFISSRQHTLS-----ASAVSALAPCASNTH 102
>gi|385302315|gb|EIF46452.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 207
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 53 GQGPQSEG-DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
G P S G D +NTT+FVGG++ +V+++ LR F +G+I +V +P GKGCGFV+F E
Sbjct: 51 GSAPYSGGQDPNNTTVFVGGINSSVSEDALRSLFDPFGDIVNVCVPPGKGCGFVRFTTHE 110
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
+A++A++++ G V+G +RL WGR+ +Q
Sbjct: 111 SAQQAVNEMQGFVLGGSRIRLRWGRSGQRRQ 141
>gi|367016893|ref|XP_003682945.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
gi|359750608|emb|CCE93734.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
Length = 617
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
+NTT+F+GGL P + + L+ FS +G I +VKIP GK CGFV++ NR +AE A+ + G
Sbjct: 384 NNTTVFIGGLTPKINEAQLQALFSPFGNILTVKIPQGKNCGFVKYENRIDAEAAIQGMQG 443
Query: 123 TVIGKQSVRLSWGRN 137
++G VRLSWGRN
Sbjct: 444 FIVGGNPVRLSWGRN 458
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PV---GKGCGFVQFANRENAEEALH 118
++FVG L P T+ DL F Q + + +V++ P+ + GFV+F N E AL
Sbjct: 204 SLFVGDLSPTATEADLLSLFQQKFRSVKTVRVMTDPITGASRCFGFVRFGNEEERRRALV 263
Query: 119 KLNGTVIGKQSVRLSWGRNPAN 140
++NG + +R+++ P N
Sbjct: 264 EMNGVWCQGRCLRVAYA-TPRN 284
>gi|388580130|gb|EIM20447.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 681
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NTT+FVGGL ++++ LR F+ +G I VKIP GKGCGFVQF + +AE A+ ++
Sbjct: 308 DPHNTTVFVGGLSSLISEDTLRVFFAPFGAITYVKIPPGKGCGFVQFVRKADAERAIERM 367
Query: 121 NGTVIGKQSVRLSWGRNPANK 141
G IG +RLSWGR+ ++K
Sbjct: 368 QGFPIGGGRIRLSWGRSQSDK 388
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIAS-------VKIPVGKGCG------FVQFANREN 112
++FVG L P+ T+ DL + F +++ VKI G FV+F+N +
Sbjct: 133 SVFVGDLSPDATEHDLMRAFQHPPNLSNPFTTCTNVKIMTDNATGSSRCFGFVRFSNEDE 192
Query: 113 AEEALHKLNGTVIGKQSVRLS 133
AL ++ G + + +RLS
Sbjct: 193 MIRALDEMQGIPVAGRPIRLS 213
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 54 QGPQS--EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
Q PQS D +NTT+F+GGL P + ++ L F +G I VKIP GKGCGF++F RE
Sbjct: 374 QTPQSVPYTDPTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKRE 433
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGR 136
+AE A+ + G IG VRLSWGR
Sbjct: 434 DAEAAIAGMQGFQIGGSRVRLSWGR 458
>gi|358056882|dbj|GAA97232.1| hypothetical protein E5Q_03908 [Mixia osmundae IAM 14324]
Length = 683
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 41 VLIGGYASNGAPGQ--GP---QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 95
+L +A P GP + D +NTT+FVGGL +++E LR F +G+I VK
Sbjct: 356 LLTSSFAGMSLPAHAAGPPITNNANDPNNTTVFVGGLPACISEETLRNFFQHFGDITYVK 415
Query: 96 IPVGKGCGFVQFANRENAEEALHKLNGTVI-GKQSVRLSWGRNPANKQ 142
IP KGCGFVQF R++AE A+ K++ I GK +RLSWGR+ +KQ
Sbjct: 416 IPPNKGCGFVQFVRRQDAELAILKMHDFPIHGKSRIRLSWGRSQGDKQ 463
>gi|323337302|gb|EGA78555.1| Nam8p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGK CGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKXCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
QG QSE D +NTTIFVGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R
Sbjct: 271 QGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTR 327
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFANRENA 113
D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 172 DTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQ 231
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 232 ARAMTEMNGMPCSSRPMRI 250
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 120 LNGTVIGKQSV--RLSW 134
NG ++ + RL+W
Sbjct: 147 YNGQMMPNVDLTFRLNW 163
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 12/104 (11%)
Query: 50 GAPG----QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 105
GAP Q S+ D +NTT+F+GGL V+++DLR F ++G+I KIP GKGCGFV
Sbjct: 208 GAPAPVASQPHPSDYDPNNTTLFIGGLSSGVSEDDLRVLFGRFGDIVYTKIPPGKGCGFV 267
Query: 106 QFANRENAEEALHKLN--------GTVIGKQSVRLSWGRNPANK 141
QF R AE A+ ++ G ++G ++R+SWGR+ ++
Sbjct: 268 QFVQRPAAESAMAQMQARCSPSLFGQILGGSTIRISWGRSSTSR 311
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKI---PV---GKGCGFVQFANRENAEE 115
S+ ++FVG L P+VTD L++ F Q+ + S K+ P+ KG GFV+F N +
Sbjct: 100 SDYSVFVGDLAPDVTDYALQEHFRQFFASVRSAKVITDPLTGRSKGYGFVRFGNEAERDR 159
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
+L +++G VI + +R+S ++ A++ P
Sbjct: 160 SLTEMSGHVINSRPIRVSIATAKKSQTATMLP 191
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
T+++G L + + + F G + SVKI V +G GFV+FA E AE+ L
Sbjct: 12 TLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQVLRT 71
Query: 120 LNGTVI--GKQSVRLSWG 135
NG I Q RL+W
Sbjct: 72 FNGCPIPNTDQIFRLNWA 89
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 56/89 (62%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
Q Q D +NTT+FVGGL V+++ L F +G + +KIP GK CGFV+++ RE A
Sbjct: 383 QHGQPYNDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGKNCGFVKYSTREEA 442
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
E+A+ + G +IG VRLSWGR N +
Sbjct: 443 EDAIASMQGYIIGGNRVRLSWGRVSVNNK 471
>gi|260940363|ref|XP_002614481.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
gi|238851667|gb|EEQ41131.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
Length = 651
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D SNTT+FVGGL V+++ L F +G I +KIP GK CGF++++ RE AEEA+ +
Sbjct: 347 DPSNTTVFVGGLRSEVSEQTLFTLFKPFGTIQQIKIPPGKNCGFLKYSTREEAEEAIQAM 406
Query: 121 NGTVIGKQSVRLSWGRNPANKQ 142
G +IG VRL WGR AN +
Sbjct: 407 EGFIIGGNRVRLGWGRVSANNK 428
>gi|4026|emb|CAA46011.1| NAM8 [Saccharomyces cerevisiae]
gi|228931|prf||1814447B NAM8 gene
Length = 523
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGK CGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG V+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLLELFINRYASTSHAKIVHDQVTGMSKGYVLVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|6321878|ref|NP_011954.1| Nam8p [Saccharomyces cerevisiae S288c]
gi|730108|sp|Q00539.2|NAM8_YEAST RecName: Full=Protein NAM8
gi|487934|gb|AAB68928.1| Nam8p: Putative RNA binding proteins [Saccharomyces cerevisiae]
gi|520596|dbj|BAA02016.1| Mre2 protein [Saccharomyces cerevisiae]
gi|190405867|gb|EDV09134.1| RNA-binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207344656|gb|EDZ71726.1| YHR086Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285809994|tpg|DAA06781.1| TPA: Nam8p [Saccharomyces cerevisiae S288c]
gi|323333247|gb|EGA74645.1| Nam8p [Saccharomyces cerevisiae AWRI796]
Length = 523
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+F+GGL VT+++LR F +G I VKIPVGK CGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Query: 121 NGTVIGKQSVRLSWGRNPANKQASL 145
G I VRLSWGR+ KQ +L
Sbjct: 369 QGFPIANSRVRLSWGRSA--KQTAL 391
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 116 ALHKLNGTVIGKQSVRL 132
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 39 LLVLIGGYASNGAPGQGPQ-SEGDSSN---TTIFVGGLDPNVTDEDLRQPFSQYGEIASV 94
+L Y +N GQ PQ S+ +S N +T+F+GGL P + + +R F +G I +V
Sbjct: 350 ILNYQNNYTANTNHGQPPQLSKSNSQNELVSTVFIGGLSPKINESQVRSLFKPFGNIVNV 409
Query: 95 KIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
K+P GK CGFV+F NR +AE A+ L G ++ +RLSWG+
Sbjct: 410 KLPPGKNCGFVKFENRIDAEAAIQGLQGFIVAGNPIRLSWGK 451
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PVGKGC---GFVQFANRENAEEALH 118
++FVG L P T+ DL F Q Y + +V++ P+ GF++F +++ + AL
Sbjct: 229 SLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMTDPITGASRCFGFIRFGDQDERKRALS 288
Query: 119 KLNGTVIGKQSVRLSWG 135
++NG + +R+++
Sbjct: 289 EMNGVWCQGRPLRVAYA 305
>gi|323349799|gb|EGA84014.1| Ngr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 593
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
G ++G +RLSWGR ++ + S ++Q+
Sbjct: 415 QGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQY 448
>gi|323338729|gb|EGA79945.1| Ngr1p [Saccharomyces cerevisiae Vin13]
Length = 594
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
G ++G +RLSWGR ++ + S ++Q+
Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQY 449
>gi|331220231|ref|XP_003322791.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301781|gb|EFP78372.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 897
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ D SNTT+FVGGL +++ L+ F +GEI VKIP KGCGFVQ+ RE+A++A+
Sbjct: 634 ASNDPSNTTVFVGGLPACISEGTLKTFFQNFGEITYVKIPPNKGCGFVQYVRREDAQQAM 693
Query: 118 HKLNGTVI-GKQSVRLSWGRNPANKQ 142
K++ I GK +RLSWGR+ +KQ
Sbjct: 694 LKMHDFPIHGKSRIRLSWGRSLGDKQ 719
>gi|323356144|gb|EGA87949.1| Ngr1p [Saccharomyces cerevisiae VL3]
Length = 562
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 248 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 307
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
G ++G +RLSWGR ++ + S ++Q+
Sbjct: 308 QGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQY 341
>gi|207347548|gb|EDZ73682.1| YBR212Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 617
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
G ++G +RLSWGR ++ + S ++Q+
Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQY 449
>gi|392301060|gb|EIW12149.1| Ngr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 670
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGR 136
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|398365523|ref|NP_009771.3| Ngr1p [Saccharomyces cerevisiae S288c]
gi|585555|sp|P32831.2|NGR1_YEAST RecName: Full=Negative growth regulatory protein NGR1; AltName:
Full=RNA-binding protein RBP1
gi|536596|emb|CAA85176.1| NGR1 [Saccharomyces cerevisiae]
gi|285810543|tpg|DAA07328.1| TPA: Ngr1p [Saccharomyces cerevisiae S288c]
Length = 672
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
G ++G +RLSWGR ++ + S ++Q+
Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQY 449
>gi|256270156|gb|EEU05383.1| Ngr1p [Saccharomyces cerevisiae JAY291]
Length = 673
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
G ++G +RLSWGR ++ + S ++Q+
Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQY 449
>gi|4031|emb|CAA78478.1| Negative growth regulatory protein [Saccharomyces cerevisiae]
Length = 672
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
G ++G +RLSWGR ++ + S ++Q+
Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQY 449
>gi|349576587|dbj|GAA21758.1| K7_Ngr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 671
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGR 136
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|190408636|gb|EDV11901.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
RM11-1a]
gi|290878229|emb|CBK39288.1| Ngr1p [Saccharomyces cerevisiae EC1118]
Length = 670
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGR 136
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|365766915|gb|EHN08404.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 669
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 121 NGTVIGKQSVRLSWGR 136
G ++G +RLSWGR
Sbjct: 415 QGFIVGGSPIRLSWGR 430
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL V + L F +G I VKIP GK CGFV+++ R+ AEEA+ +
Sbjct: 445 DPNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYSTRDEAEEAIAAM 504
Query: 121 NGTVIGKQSVRLSWGR 136
G +IG VRLSWGR
Sbjct: 505 QGFIIGGNRVRLSWGR 520
>gi|365987806|ref|XP_003670734.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
gi|343769505|emb|CCD25491.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 41 VLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 100
V+ G SNG QG S +S N+TIFVGGL +V++++L + F +GEI VKIP+GK
Sbjct: 286 VVTGNLRSNGNIRQGLGS--NSKNSTIFVGGLSTDVSEQELNELFRPFGEIMDVKIPLGK 343
Query: 101 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
CGFV F R +A+ A+ L+G ++ +RLSWG+
Sbjct: 344 KCGFVTFKRRIDAKAAIKGLHGFLVRGCPIRLSWGK 379
>gi|151946599|gb|EDN64821.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
YJM789]
Length = 670
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P T+ LR F +G I +V IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVTIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 121 NGTVIGKQSVRLSWGR 136
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
P++ + NT +FVGGLD +V+ + LR F G+IA ++IP G+GCGFV F +R+NA
Sbjct: 238 HAPKATEEGENTCVFVGGLDESVSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHRKNA 297
Query: 114 EEALHKLNGTVIGKQSVRLSWG 135
E A+ L G I VRLSWG
Sbjct: 298 EAAISTLQGLRINGYKVRLSWG 319
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQF 107
GP + D S IFVG LD VT++ L F++ Y I S K+ + KG GF++F
Sbjct: 129 GPPPQADWS---IFVGDLDYTVTEQQLHGAFAKKYRSILSTKLVIDMSTGLSKGFGFIKF 185
Query: 108 ANRENAEEALHKLNGTVIGKQSVR 131
+ + A+++++G +G++++R
Sbjct: 186 GSEAERDSAMNEMHGQYVGERAIR 209
>gi|448097114|ref|XP_004198591.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359380013|emb|CCE82254.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q D NTT+FVGGL V D+ L F +G I VKIP GK CGF++++ R+ AE+A
Sbjct: 416 QPFADPKNTTVFVGGLSAEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDA 475
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ + G +IG VRLSWG+
Sbjct: 476 IASMQGFIIGGNRVRLSWGK 495
>gi|365761964|gb|EHN03583.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 666
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL P + LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTAEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 121 NGTVIGKQSVRLSWGR 136
G ++G +RLSWGR
Sbjct: 415 QGFIVGGSPIRLSWGR 430
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
GQ D SNTT+FVGG++ +VT++ LR F+ GEI +V P G+GC FV FA+R +
Sbjct: 192 GQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRAS 251
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRN 137
AE ++ + GT + VRLSWG++
Sbjct: 252 AEHVINNMQGTTVCGSCVRLSWGKS 276
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 118
++FVG L P VTD +L+ F +Y + K+ P+ K GF++F + + +EAL
Sbjct: 108 SVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALT 167
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
+NG + +R++ PA K+ S+
Sbjct: 168 AMNGAECCGRPIRVA----PATKRTSV 190
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI------PVGKGCGFVQFAN 109
Q E S+ T+++G + P+ T+E + FS G+ VK+ + G GF+ F N
Sbjct: 8 QDENRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRN 67
Query: 110 RENAEEALHKLNGTVIGKQSV--RLSWG 135
E A+ L LNG I S+ RL+WG
Sbjct: 68 HETAQLVLDSLNGKPIEGTSLRYRLNWG 95
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
+S P QG S D NTT+FVGGL T++DL FS +G I ++KIP GKGCGFVQ
Sbjct: 306 SSTRQPDQGLCSI-DPFNTTVFVGGLFSGATEKDLFYHFSPFGNILNIKIPPGKGCGFVQ 364
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
+ + AE+A+ + G ++G +RL+WG N
Sbjct: 365 YTEKAAAEKAITMMQGALVGPSHIRLAWGHN 395
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 49 NGAPGQGPQSEGDSSNT---TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV--- 98
N A G G Q + ++FVG LDP + +L F S Y S KI PV
Sbjct: 165 NWATGGGIQHSAKTRREPEYSVFVGDLDPETHEAELYHTFHSVYPSCTSAKIIIDPVTGM 224
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 133
+ GFV+F++ + AL ++ G + + +R+S
Sbjct: 225 SRKYGFVRFSDEREQQRALSEMQGYLCHGRPLRIS 259
>gi|448111139|ref|XP_004201770.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359464759|emb|CCE88464.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q D NTT+FVGGL V D+ L F +G I VKIP GK CGF++++ R+ AE+A
Sbjct: 416 QPFADPKNTTVFVGGLSSEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDA 475
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ + G +IG VRLSWG+
Sbjct: 476 IASMQGFIIGGNRVRLSWGK 495
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T+FVGGL +++D +LR F YGE+ +KIP GKGCGFVQFA R AE A+ LN
Sbjct: 228 NCTVFVGGLG-SISDAELRIHFEPYGELVYIKIPHGKGCGFVQFAQRSCAEAAIAGLNNA 286
Query: 124 VIGKQSVRLSWGR-NP 138
+IG VRLSW R NP
Sbjct: 287 LIGTSRVRLSWVRSNP 302
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAE 114
++ +T+++G L + + L Q F+ G +ASVKI K G GFV+ +R AE
Sbjct: 9 EAGGSTLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRATAE 68
Query: 115 EALHKLNGTVI--GKQSVRLSW 134
AL LNGT + +Q+ RL+W
Sbjct: 69 HALRALNGTQMPNAQQNYRLNW 90
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 105
G G +S++ +IFVG L P V D L++ FS +Y + + ++ KG GFV
Sbjct: 101 GGGDGGATNSNDHSIFVGDLPPEVNDFMLQEVFSSRYASVRNARVVTDPATGRSKGFGFV 160
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLS 133
+FA+ + AL ++NG G +++R+S
Sbjct: 161 RFADESQRDRALVEMNGLACGSRNMRIS 188
>gi|328858949|gb|EGG08060.1| hypothetical protein MELLADRAFT_31227 [Melampsora larici-populina
98AG31]
Length = 76
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D SNTT+FVGGL +++E L+ F +GEI VKIP KGCGFVQ+ R +AE A+ K+
Sbjct: 1 DPSNTTVFVGGLPACISEETLKTFFQNFGEITYVKIPPNKGCGFVQYVRRADAEAAMLKM 60
Query: 121 NGTVI-GKQSVRLSWG 135
+ I GK +RLSWG
Sbjct: 61 HDFPIHGKSRIRLSWG 76
>gi|255719794|ref|XP_002556177.1| KLTH0H06842p [Lachancea thermotolerans]
gi|238942143|emb|CAR30315.1| KLTH0H06842p [Lachancea thermotolerans CBS 6340]
Length = 547
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
+ +NTT+F+GGL + ++ L F+ +G I +VKIP GKGCGFV++A R +AE A+ +
Sbjct: 402 NPNNTTVFIGGLTSHTSERQLHSLFAPFGTIINVKIPPGKGCGFVKYAYRIDAEAAIQGM 461
Query: 121 NGTVIGKQSVRLSWGRNPAN 140
G ++G +RLSWGR +
Sbjct: 462 QGFIVGGNPIRLSWGRTSTD 481
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+ L F +G I +KIP GK CGFV+++ RE AE + +
Sbjct: 422 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIGAM 481
Query: 121 NGTVIGKQSVRLSWGR 136
G +IG VRLSWGR
Sbjct: 482 QGFIIGGNRVRLSWGR 497
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
QG + + +N+ +FVG LD VTDEDL + FS YGE+ +VKI GK CGFV +++R +A
Sbjct: 219 QGTYPDSNRNNSRLFVGQLDSCVTDEDLIKAFSPYGEL-TVKIIEGKSCGFVTYSSRASA 277
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
EEAL LNG+ +G + + W R+ KQ
Sbjct: 278 EEALTILNGSQLGDNIITVVWARHAPKKQ 306
>gi|320584167|gb|EFW98378.1| RNA-binding post-transcriptional regulator csx1 [Ogataea
parapolymorpha DL-1]
Length = 485
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 52 PGQGP-QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
P P Q D +NTT+F+GGL+ +++ LR FS+YG+I+ VKIP GK CGFVQF +R
Sbjct: 265 PQTAPLQYYNDPNNTTVFIGGLNVPISEMQLRALFSRYGDISYVKIPPGKNCGFVQFFHR 324
Query: 111 ENAEEALHKLNGTVIGKQ-SVRLSWGRNPANK 141
+AE A+ ++ G IG +R+SWG A +
Sbjct: 325 ASAEMAISEMQGYDIGGGCRIRVSWGARAAQR 356
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 35 NIVFLLVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 93
N+ F + S+GA Q +G S +IFVG L VT++ L Q F ++Y +
Sbjct: 125 NVRFFRLNWSSANSSGANATAFQPKGQSE-YSIFVGDLPQTVTEQSLLQAFQARYPSCSG 183
Query: 94 VKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 133
K+ + KG GFV+F N + + AL ++ G V+ + +R+S
Sbjct: 184 AKVMIDPATGHLKGYGFVKFLNETDQKRALIEMQGYVLLGRPIRVS 229
>gi|354545611|emb|CCE42339.1| hypothetical protein CPAR2_808880 [Candida parapsilosis]
Length = 739
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL VT+ L F +G I +KIP GK CGFV+++ RE AE + +
Sbjct: 472 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIAAM 531
Query: 121 NGTVIGKQSVRLSWGR 136
G +IG VRLSWG+
Sbjct: 532 QGFIIGGNRVRLSWGK 547
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
E + +NTT+FVGGLDP T+++LR F G I SVK+P G+GCGFVQ++++E AE A+
Sbjct: 189 EEEGTNTTVFVGGLDPATTEDELRARFGALGAIVSVKVPPGRGCGFVQYSSKEAAEVAIS 248
Query: 119 KLNGTVI 125
++NG +
Sbjct: 249 QMNGQAV 255
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAE 114
S + +IFVG L P+VTDE L F +++ + K+ PV KG GFV+F ++E A+
Sbjct: 93 SDDHSIFVGDLAPDVTDELLLATFNARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEAD 152
Query: 115 EALHKLNGTVIGKQSVRLSWG--RNPANKQASLS 146
+AL +NG + +R+S RN + +Q +
Sbjct: 153 QALQTMNGVYCSSRPMRVSVATERNKSRQQVGFT 186
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
S+TT+FVGGL+PN+ + L + F +G I VKIP GK CGFV++ R AE A++ L G
Sbjct: 443 SSTTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGLQG 502
Query: 123 TVIGKQSVRLSWGR 136
+I +RLSWGR
Sbjct: 503 FIIMGSPIRLSWGR 516
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 118
++FVG L P T+ DL F ++Y + +V++ P+ + GFV+FAN AL
Sbjct: 160 SLFVGDLSPFATEADLLSLFQTKYNSVKTVRVMTDPITGASRCFGFVRFANETERRNALI 219
Query: 119 KLNGTVIGKQSVRLSWG 135
++NG + +R+++
Sbjct: 220 EMNGVQFQGRQLRVAYA 236
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L PN ++ LR+ F YG I SVKIP CGF+ F E+AE A+ ++NG
Sbjct: 214 NTTVYVGNLSPNTDEKILREFFQGYGPITSVKIPTNSNCGFINFTRTEHAERAIIEMNGI 273
Query: 124 VIGKQSVRLSWGRNPANKQ 142
I VR+SWGR NK+
Sbjct: 274 EIQGNRVRVSWGRVQHNKK 292
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGF 104
PG P S G + +IFVG L P+V D L Q F ++Y + K+ + KG GF
Sbjct: 96 PGGKPSSGGKENIVSIFVGDLAPDVNDYMLEQTFRNRYPSVRGAKVVMDPKSGISKGYGF 155
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSST 152
V+FA+ ++ ++ ++ G I + V++S N Q +L +T
Sbjct: 156 VKFADEDDMMRSMTEMQGVYISSRPVKISHATNNFKSQGALEDLMPTT 203
>gi|308198150|ref|XP_001387102.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
gi|149389050|gb|EAZ63079.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
Length = 690
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 56/86 (65%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
+PG PQ D +NTT+FVGGL VT+ L F +G I VKIP GK CGF++++ R
Sbjct: 388 SPGVQPQPYTDPNNTTVFVGGLSSEVTESTLFTLFKPFGIIQQVKIPPGKNCGFIKYSTR 447
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
E AEEA+ + G +IG VRLSWGR
Sbjct: 448 EEAEEAIAAMQGFIIGGNRVRLSWGR 473
>gi|331220241|ref|XP_003322796.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301786|gb|EFP78377.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 666
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S+TT+FV GL +T++ L+ F +GEIA VKIP KG GFV++ RE+A++A+ K+
Sbjct: 146 DPSSTTVFVAGLPACITEDTLKTFFQNFGEIAYVKIPPHKGYGFVKYVRREDAKQAIIKM 205
Query: 121 NGTVIGKQS-VRLSWGRNPANKQ 142
N I ++S +RLSWGR+ +K+
Sbjct: 206 NDFPIHEKSRIRLSWGRSLGDKK 228
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D+SNTT+F+GGL + + +L+ F +G I SVKIP+GK CGFV+F + A A+ +
Sbjct: 338 DNSNTTVFIGGLSTSTNEYELQVLFEPFGNILSVKIPIGKNCGFVKFKRKIEANAAIKGM 397
Query: 121 NGTVIGKQSVRLSWGRNPANKQASLS 146
G +I +RLSWG++ N L+
Sbjct: 398 QGFIINGNPIRLSWGKSNNNASTKLN 423
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PVG---KGCGFVQFANRENAEEALH 118
++F+G L P T+ D+ F + Y + +V++ P+ +G GF++F++ + ++AL
Sbjct: 184 SLFIGDLSPLTTEADILSIFQKKYKSVKTVRVMTDPINGSSRGFGFIRFSDEDERKDALE 243
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
+NG + + RL+ NK A+ + T
Sbjct: 244 NMNGVMCHSRYFRLALATPRTNKFATSTNMT 274
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+ D +NTT+FVG L+ +T+++L++ F +G I VKIP GK CGFV+F N+ +AE +
Sbjct: 314 HSDNDPTNTTVFVGNLNCKITEDELQKVFEPFGAIEKVKIPPGKKCGFVKFCNKIDAEAS 373
Query: 117 LHKLNGTVIGKQSVRLSW 134
++ L G + +R+SW
Sbjct: 374 MYGLQGYFVAGSPIRISW 391
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PV---GKGCGFVQFANRENAEEALH 118
++FVG L P T+ DL + F + + + +V++ P+ + GF++ ++ EEAL
Sbjct: 182 SLFVGDLSPMTTEADLLKLFQKTFKSVKTVRVMTDPITGESRCFGFIRLSDEFEREEALD 241
Query: 119 KLNGTVIGKQSVRLSWGRNPAN 140
K+NGT++ + +R++ NP N
Sbjct: 242 KMNGTLLHGRQLRVALA-NPRN 262
>gi|164660242|ref|XP_001731244.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
gi|159105144|gb|EDP44030.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
Length = 564
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVG L T+ LR F+ YG I S+ IP G+ CGFVQFA++++A A+ ++
Sbjct: 462 DPTNTTVFVGSLFSLATENTLRTLFAPYGPIQSINIPRGQDCGFVQFASKQDAARAIAEM 521
Query: 121 NG-TVIGKQSVRLSWGRNPANK 141
G ++G ++RLSWGR+ K
Sbjct: 522 QGFQIVGGGALRLSWGRSVGEK 543
>gi|68472181|ref|XP_719886.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
gi|68472416|ref|XP_719769.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441601|gb|EAL00897.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441727|gb|EAL01022.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
Length = 887
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++NRE AEEA+ +
Sbjct: 517 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 576
Query: 121 NGTVIGKQSVRLSWGR 136
G VIG VRLSWGR
Sbjct: 577 QGFVIGGNRVRLSWGR 592
>gi|344301504|gb|EGW31816.1| hypothetical protein SPAPADRAFT_56576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 632
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 113
Q Q D +NTT+FVGGL V++ L F +G I VKIP GK CGFV++ RE A
Sbjct: 377 QLAQPYADPTNTTVFVGGLSSEVSEPTLFTLFKPFGIIQQVKIPPGKNCGFVKYTTREEA 436
Query: 114 EEALHKLNGTVIGKQSVRLSWGR-NPANKQ 142
EEA+ + G +IG VRLSWGR +P NK+
Sbjct: 437 EEAIAAMQGFIIGGNRVRLSWGRVSPTNKK 466
>gi|238881096|gb|EEQ44734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 875
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++NRE AEEA+ +
Sbjct: 509 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 568
Query: 121 NGTVIGKQSVRLSWGR 136
G VIG VRLSWGR
Sbjct: 569 QGFVIGGNRVRLSWGR 584
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
GP G TT+FVGGL+ +T+E+LR F +G I +VKI K F+Q+ + +AE
Sbjct: 181 GPVVSGPEEITTVFVGGLNNTITEEELRAYFGTFGNIVAVKIIPLKNIAFIQYEKKSSAE 240
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQ 153
+A+ +LNG+ +G +RLS+GR N S SS Q
Sbjct: 241 QAISELNGSHLGGAKLRLSFGRTQLNVNPSAHYVPSSYQ 279
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHK 119
IFVG L +V D L F S+Y AS K+ V KG GFV+F + + +L +
Sbjct: 97 IFVGDLRADVDDNILLTTFQSRYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEE 156
Query: 120 LNGTVIGKQSVRLSWGRNPA 139
+ G +G +R+S R A
Sbjct: 157 MQGAYVGSSRIRVSVARPKA 176
>gi|294658145|ref|XP_002770728.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
gi|202952907|emb|CAR66259.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
Length = 747
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 112
GQ Q D +NTT+FVGGL VT++ L F +G I VKIP GK CGF+++++RE
Sbjct: 411 GQHGQPFTDPNNTTVFVGGLSSEVTEQTLFTLFKPFGIIQQVKIPPGKNCGFIKYSSREE 470
Query: 113 AEEALHKLNGTVIGKQSVRLSWGR 136
AEEA+ + G +IG VRLSWGR
Sbjct: 471 AEEAIAAMQGFIIGGNRVRLSWGR 494
>gi|241953763|ref|XP_002419603.1| RNA-binding protein, putative; U1 snRNP protein, putative [Candida
dubliniensis CD36]
gi|223642943|emb|CAX43198.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 792
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++ RE AEEA+ +
Sbjct: 461 DPNNTTVFVGGLSADVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSTREEAEEAIAAM 520
Query: 121 NGTVIGKQSVRLSWGR 136
G VIG VRLSWGR
Sbjct: 521 QGFVIGGNRVRLSWGR 536
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 105
Y S+ A G ++ D +NTT+FVGGLD +VTD+ L+ FSQYGEI VKIP GK CGFV
Sbjct: 245 YQSSAA---GVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFV 301
Query: 106 QFANR 110
QF+ +
Sbjct: 302 QFSEK 306
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 113
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 114 EEALHKLNGTVIGKQSVRL 132
A+ ++NG + +R+
Sbjct: 211 IRAMTEMNGVPCSTRPMRI 229
>gi|440795338|gb|ELR16465.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ D SNTTIFVG LD V +++LR F +GE+ V++P GK CGFVQF +R AE A+
Sbjct: 247 QADPSNTTIFVGNLDSTVGEDELRGHFMPFGELVYVRVPPGKNCGFVQFVHRSCAENAML 306
Query: 119 KLNGTVIG 126
+++G IG
Sbjct: 307 RVHGKTIG 314
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRE 111
SE D T++VG +D + + + F E+A+VKI K G GFV+F + E
Sbjct: 14 SEAD--KRTLWVGDIDRWMDENYIVALFGSAAEVANVKIIRDKMTGLPAGYGFVEFKSHE 71
Query: 112 NAEEALHKLNGTVIG--KQSVRLSWG 135
A L+ N I +S RL+W
Sbjct: 72 GAARVLNDFNNVPIPGVGRSFRLNWA 97
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
NT++++G ++ +V DEDLR F ++G I V+I +G FV+F +++A A+ K+NG
Sbjct: 135 DNTSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRFDKKDSACNAIVKMNG 194
Query: 123 TVIGKQSVRLSWGRNP 138
T IG Q+V+ SWGR P
Sbjct: 195 TEIGGQTVKCSWGRTP 210
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 49 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q++ D+S + +F+G L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 14 NWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKG 73
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 74 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 111
>gi|383136461|gb|AFG49308.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136463|gb|AFG49309.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136465|gb|AFG49310.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136467|gb|AFG49311.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136469|gb|AFG49312.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136471|gb|AFG49313.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136473|gb|AFG49314.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136475|gb|AFG49315.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136477|gb|AFG49316.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136479|gb|AFG49317.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136481|gb|AFG49318.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136483|gb|AFG49319.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136485|gb|AFG49320.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136487|gb|AFG49321.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136489|gb|AFG49322.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136491|gb|AFG49323.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136493|gb|AFG49324.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
Length = 67
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 98 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
VGKGCGFVQFANR AEEAL +L+GTVI +Q++RLSWGR+PANK
Sbjct: 1 VGKGCGFVQFANRACAEEALQRLHGTVIRQQTIRLSWGRSPANK 44
>gi|361068433|gb|AEW08528.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
Length = 67
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 98 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
VGKGCGFVQFANR AEEAL +L+GTVI +Q++RLSWGR+PANK
Sbjct: 1 VGKGCGFVQFANRACAEEALQRLHGTVIRQQTIRLSWGRSPANK 44
>gi|449530398|ref|XP_004172182.1| PREDICTED: uncharacterized protein LOC101232188 [Cucumis sativus]
Length = 167
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
S IFVGGLD +V+DEDL+Q FS+ G++ SVKIP+GKGCGF+QF NR
Sbjct: 118 SPPLPIFVGGLDYDVSDEDLKQAFSKLGDVVSVKIPIGKGCGFLQFTNR 166
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVG 99
+AS+ Q P S + IFVG L P + DLR+ FS +GEI+ ++
Sbjct: 85 WASSAIQQQTPHRPDTSKHHHIFVGDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKS 144
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
KG GFV F N+++AE A+H ++G+ +G +++R +W R P +K+
Sbjct: 145 KGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWASRKPNHKE 188
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDED-LRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
++ SN T++ GGL+ + ED LRQ F ++GEI +++ KG F++F ++E+A A
Sbjct: 207 AQSSPSNCTVYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKDKGYAFIKFNSKESACRA 266
Query: 117 LHKLNGTVIGKQSVRLSWGR--NPANKQASLSPF 148
+ + + IG Q+V+ SWG+ PA Q P+
Sbjct: 267 IVARHNSDIGGQAVKCSWGKEQEPAQPQFPYDPY 300
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 122
T++VG LD VT++ + FSQ G+I KI P FV+F N +A A+ +N
Sbjct: 14 TLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSDPYCFVEFVNHSDASSAITAMNA 73
Query: 123 TVIGKQSVRLSWGRNPANKQASLSPFTS 150
+ + +R++W + +Q P TS
Sbjct: 74 RMCLGRELRVNWASSAIQQQTPHRPDTS 101
>gi|297849030|ref|XP_002892396.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
gi|297338238|gb|EFH68655.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
Length = 481
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+S D S T++VGGL+ + ++D+R F YGEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 117 LHKL-NGTVIGKQSVRLSWGRNPANKQAS 144
+L N V+ Q ++L+WGR ++ S
Sbjct: 280 AQELANRLVVNGQRLKLTWGRPKPDQDGS 308
>gi|361068435|gb|AEW08529.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|376339252|gb|AFB34150.1| hypothetical protein CL263Contig2_03, partial [Pinus cembra]
Length = 67
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 40/44 (90%)
Query: 98 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 141
VGKGCGFVQF+NR AEEAL +L+GTVI +Q++RLSWGR+PANK
Sbjct: 1 VGKGCGFVQFSNRACAEEALQRLHGTVIRQQTIRLSWGRSPANK 44
>gi|356553476|ref|XP_003545082.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 482
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANKQAS 144
N VI ++L WGR +K S
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSKPES 308
>gi|356574477|ref|XP_003555373.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 481
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANKQAS 144
N VI ++L WGR +K S
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSKPES 308
>gi|297745955|emb|CBI16011.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD VT++DLR F +GEI SV++ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WGR A K
Sbjct: 284 SNKLVIKGLRLKLMWGRPQAPK 305
>gi|356549608|ref|XP_003543184.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 467
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANKQAS 144
N VI ++L WGR K S
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTTKPES 308
>gi|357462041|ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355490350|gb|AES71553.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 492
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD VT++DLR F +GEI SVK+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANKQAS 144
N VI ++L WGR + K S
Sbjct: 284 SNKLVIKGLRLKLMWGRPQSAKPES 308
>gi|297822673|ref|XP_002879219.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
gi|297325058|gb|EFH55478.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
Length = 464
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+S D S T++VGGL+ V ++D+R F YGEI S++I K C FV + RE AE+A
Sbjct: 220 ESPEDQSIKTLYVGGLNSRVLEQDIRDQFYAYGEIESIRILAEKACAFVTYTTREGAEKA 279
Query: 117 LHKL-NGTVIGKQSVRLSWGR 136
+L N V+ Q ++L+WGR
Sbjct: 280 AEELSNRLVVNGQRLKLTWGR 300
>gi|242008705|ref|XP_002425142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508823|gb|EEB12404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 849
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T I++G L+P +T++ L + F +YG +AS+KI GK CGFV F NR
Sbjct: 178 GDPNTTNIYLGNLNPKITEQQLMELFGRYGPLASIKIMWPRTDEEKARGKNCGFVAFMNR 237
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
++ E A+ LNG + + ++L WG+
Sbjct: 238 KDGERAMRNLNGKDVMQYEMKLGWGK 263
>gi|225434698|ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Vitis vinifera]
Length = 474
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD VT++DLR F +GEI SV++ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WGR A K
Sbjct: 284 SNKLVIKGLRLKLMWGRPQAPK 305
>gi|15450878|gb|AAK96710.1| Unknown protein [Arabidopsis thaliana]
gi|21387095|gb|AAM47951.1| unknown protein [Arabidopsis thaliana]
Length = 481
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 117 LHKL-NGTVIGKQSVRLSWGR 136
+L N VI Q ++L+WGR
Sbjct: 280 AQELSNRLVINGQRLKLTWGR 300
>gi|18390760|ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
gi|75335266|sp|Q9LNV5.1|C3H4_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 4;
Short=AtC3H4
gi|8778549|gb|AAF79557.1|AC022464_15 F22G5.30 [Arabidopsis thaliana]
gi|332189993|gb|AEE28114.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
Length = 481
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 117 LHKL-NGTVIGKQSVRLSWGR 136
+L N VI Q ++L+WGR
Sbjct: 280 AQELSNRLVINGQRLKLTWGR 300
>gi|303279645|ref|XP_003059115.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458951|gb|EEH56247.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 419
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S TT+F+GG+D VT+ DL+ F YGEI S++ K CGFV F +R AE+A L
Sbjct: 230 DKSITTLFIGGMDERVTEGDLKDTFYAYGEIKSIRCVHAKNCGFVTFTDRAGAEKAAEAL 289
Query: 121 NGT-VIGKQSVRLSWGR 136
+G VI ++L WG+
Sbjct: 290 SGDLVINNLRLKLMWGK 306
>gi|221128187|ref|XP_002162583.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Hydra
magnipapillata]
Length = 470
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+S D S TT++VGGLD + ++DLR F QYGEI SV + K CGF+ + +R+ AE A
Sbjct: 224 ESPSDKSITTLYVGGLDERIKEDDLRNFFYQYGEIRSVVVASNKSCGFICYTSRQAAEMA 283
Query: 117 LHK-LNGTVIGKQSVRLSWGRN 137
+ N +I + +++ WGR+
Sbjct: 284 AERSFNKVIIKGKRLKVLWGRS 305
>gi|195382900|ref|XP_002050166.1| GJ21992 [Drosophila virilis]
gi|194144963|gb|EDW61359.1| GJ21992 [Drosophila virilis]
Length = 910
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------P 97
ASN G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 174 ASNARDAGGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQ 233
Query: 98 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
G+ CGFV + +R++AE AL LNG I +RL WG+
Sbjct: 234 RGRNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWGKT 273
>gi|326677860|ref|XP_003200931.1| PREDICTED: pre-mRNA-splicing factor RBM22-like, partial [Danio
rerio]
Length = 407
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 210 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 269
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N +I + + + WGR+ A +
Sbjct: 270 FNKLIINGRRLNVKWGRSQAAR 291
>gi|47086019|ref|NP_998379.1| pre-mRNA-splicing factor RBM22 [Danio rerio]
gi|326677871|ref|XP_003200934.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Danio rerio]
gi|82237380|sp|Q6NZZ9.1|RBM22_DANRE RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|41388933|gb|AAH65892.1| RNA binding motif protein 22 [Danio rerio]
gi|49619055|gb|AAT68112.1| FLJ10290-like [Danio rerio]
Length = 425
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N +I + + + WGR+ A +
Sbjct: 288 FNKLIINGRRLNVKWGRSQAAR 309
>gi|256086132|ref|XP_002579259.1| nucleolysin tia-1 [Schistosoma mansoni]
gi|353232225|emb|CCD79580.1| putative nucleolysin tia-1 [Schistosoma mansoni]
Length = 547
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
S+NTTI+VGG+ +T++ L+ F Q+GEI ++I KG F++F + A +A+ ++
Sbjct: 135 STNTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFIRFDSHVAATQAIVTMH 194
Query: 122 GTVIGKQSVRLSWGRNP--ANKQASLSPFTSSTQFKKIEYN 160
G ++G Q+ + SWG+ P NKQ +S+ + +N
Sbjct: 195 GKIVGDQACKCSWGKEPTFTNKQGLAKRLSSAMFVPTLNHN 235
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 120
IFVG L P V DE L FS +G I KI KG GFV +A R+ AE A+ +
Sbjct: 35 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 94
Query: 121 NGTVIGKQSVRLSWG--RNPANKQASLSPF 148
NG +IG +++R +W ++PA++ P
Sbjct: 95 NGQIIGTRAIRTNWAVRKDPADQAKDHRPL 124
>gi|157422918|gb|AAI53464.1| RNA binding motif protein 22 [Danio rerio]
Length = 425
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N +I + + + WGR+ A +
Sbjct: 288 FNKLIINGRRLNVKWGRSQAAR 309
>gi|390333471|ref|XP_794306.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Strongylocentrotus purpuratus]
Length = 1300
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T IF+G ++P + +E L + F QYG +ASVKI + CGFV
Sbjct: 253 GSHDYGDPNTTNIFLGSINPKMNEEMLCKEFVQYGPLASVKIMWPRTDAERQRNRNCGFV 312
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE A+ LNG I ++L WG+
Sbjct: 313 AFMNRRDAERAMRALNGKEIMNYEMKLGWGK 343
>gi|198461072|ref|XP_001361904.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
gi|198137226|gb|EAL26483.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
Length = 956
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 47 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------P 97
A++ A G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 195 AASNAREVGSFDTGDPNTTNLYLGNLNPKISEQQLMETFGRYGPLASIKIMWPRSDEEKA 254
Query: 98 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
G+ CGFV + +R +AE AL LNG I +RL WG+
Sbjct: 255 RGRNCGFVAYMSRRDAERALRTLNGRYIMGYEMRLGWGK 293
>gi|356499475|ref|XP_003518565.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 484
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANKQAS 144
N VI ++L WGR +K S
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSKPES 308
>gi|15227567|ref|NP_180518.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
gi|75339110|sp|Q9ZW36.1|C3H25_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=AtC3H25
gi|16226863|gb|AAL16284.1|AF428354_1 At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|3980378|gb|AAC95181.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|27363236|gb|AAO11537.1| At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|330253181|gb|AEC08275.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
Length = 483
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+S D S T++VGGL+ V ++D+R F +GEI S++I K C FV + RE AE+A
Sbjct: 220 ESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKA 279
Query: 117 LHKL-NGTVIGKQSVRLSWGR 136
+L N V+ Q ++L+WGR
Sbjct: 280 AEELSNRLVVNGQRLKLTWGR 300
>gi|226480630|emb|CAX73412.1| TIA1 cytotoxic granule-associated RNA binding protein [Schistosoma
japonicum]
Length = 651
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
++NTTI+VGG+ +T++ L+ F Q+GEI ++I KG FV+F + A +A+ ++
Sbjct: 259 AANTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFVRFDSHVAATQAIVTMH 318
Query: 122 GTVIGKQSVRLSWGRNP--ANKQASLSPFTSSTQFKKIEYN 160
G ++G Q+ + SWG+ P NKQ +S+ + +N
Sbjct: 319 GKIVGDQACKCSWGKEPTFTNKQVLAKRLSSTLLVPNLNHN 359
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRE 111
SE DS + IFVG L P V DE L FS +G I KI KG GFV +A R+
Sbjct: 152 SEDDSFH--IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQ 209
Query: 112 NAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
AE A+ +NG +IG +++R +W ++PA++ P
Sbjct: 210 EAERAIRIMNGQIIGSRAIRTNWAVRKDPADQAKDHRPL 248
>gi|374256067|gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
guineensis]
Length = 307
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD +T++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARITEQDLRDHFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGR 136
N VI ++L WG+
Sbjct: 284 ANKLVIKGLRLKLMWGK 300
>gi|348503420|ref|XP_003439262.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Oreochromis niloticus]
Length = 972
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 200 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 259
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 260 AFMNRRDAERALKNLNGKMIMNFEMKLGWGK 290
>gi|194881758|ref|XP_001974988.1| GG22076 [Drosophila erecta]
gi|190658175|gb|EDV55388.1| GG22076 [Drosophila erecta]
Length = 960
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVG 99
N + G GD + T +++G L+P ++++ L + F +YG +AS+KI G
Sbjct: 199 NSSKESGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRG 258
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV + +R++AE AL LNG I +RL WG+
Sbjct: 259 RNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWGK 295
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+ NT+++VG + + T+EDLR+ F+ G I+ V+I +G FV++A +E A A+ ++N
Sbjct: 236 ADNTSVYVGNVHSSTTEEDLREAFASIGAISEVRIFKQQGYAFVRYATKEAATRAIMQMN 295
Query: 122 GTVIGKQSVRLSWGRNP 138
G I Q+++ SWGR P
Sbjct: 296 GKEINGQNIKCSWGRTP 312
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 120
+FVG L + + L+ F+ YGEI+ K+ KG GFV F ++E+AE+A+ +
Sbjct: 136 VFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAGM 195
Query: 121 NGTVIGKQSVRLSWG-RNPANKQ 142
NG +IG++ +R +W R PA+ +
Sbjct: 196 NGQLIGRRQIRTNWASRKPASAE 218
>gi|133711805|gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGG+D +T++DLR F +GEI S+K+ V +GC FV + RE A +A +L
Sbjct: 224 DESIRTLYVGGVDARITEQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTREGAVKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGR 136
N VI ++L WGR
Sbjct: 284 ANKLVIKGLRLKLLWGR 300
>gi|317419983|emb|CBN82019.1| U2-associated protein SR140 [Dicentrarchus labrax]
Length = 965
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 101
APG GD S T +++G ++P + +E L Q F +YG +ASVKI +
Sbjct: 191 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN 248
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 249 CGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGK 283
>gi|363737140|ref|XP_422593.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Gallus gallus]
Length = 1020
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 248 SGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDE 305
Query: 97 --PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 306 ERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 347
>gi|123391676|ref|XP_001300116.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881103|gb|EAX87186.1| hypothetical protein TVAG_383730 [Trichomonas vaginalis G3]
Length = 180
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENA 113
G+ S T +FVG D DLR F ++G++ + KI KGCG VQFAN ++A
Sbjct: 2 GEESETCLFVGNYPLEDQDIDLRVKFMRFGKVIAAKIFTRKGSFKSKGCGIVQFANHDDA 61
Query: 114 EEALHKLNGTVIGKQSVRLSWG 135
++A+ +LNGTV Q++R+ WG
Sbjct: 62 QKAIDELNGTVYKGQTIRVKWG 83
>gi|47223423|emb|CAG04284.1| unnamed protein product [Tetraodon nigroviridis]
Length = 964
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 101
APG GD S T +++G ++P + +E L Q F +YG +ASVKI +
Sbjct: 183 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN 240
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 241 CGFVAFMNRRDAERALKHLNGKMIMNFEMKLGWGK 275
>gi|427798579|gb|JAA64741.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 381
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D+S TT++VG L +T++DLR F QYGEI V + + C FVQF NR +AE A K
Sbjct: 228 DTSITTLYVGNLGDRLTEKDLRDHFYQYGEIRGVTMLARQQCAFVQFTNRVSAELAADKT 287
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASLS 146
N ++G + + + WGR P +QA+ S
Sbjct: 288 FNKLILGGRRLVIKWGR-PLARQATPS 313
>gi|452821583|gb|EME28612.1| U2-associated protein SR14 isoform 1 [Galdieria sulphuraria]
Length = 610
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---------GKGCGFV 105
G GD T IF+G L+P+ T+E L + F ++G + S+KI G GFV
Sbjct: 129 GSHDSGDPLTTNIFLGNLNPSTTEETLLRTFGRFGPVGSIKIMYPRTPEEHLRGYNSGFV 188
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
F R++AE AL L GT++ VRL+WG+ LSP
Sbjct: 189 SFMERDDAEAALEALQGTLLDGFLVRLAWGKPVKRPLKPLSP 230
>gi|449453956|ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
gi|449525922|ref|XP_004169965.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
Length = 517
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD V+++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYVGGLDARVSEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WGR A K
Sbjct: 284 SNKLVIRGLRLKLMWGRPQAPK 305
>gi|195170236|ref|XP_002025919.1| GL10142 [Drosophila persimilis]
gi|194110783|gb|EDW32826.1| GL10142 [Drosophila persimilis]
Length = 956
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 203 GSFDTGDPNTTNLYLGNLNPKISEQQLMETFGRYGPLASIKIMWPRSDEEKARGRNCGFV 262
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ +R +AE AL LNG I +RL WG+
Sbjct: 263 AYMSRRDAERALRTLNGRYIMGYEMRLGWGK 293
>gi|452821584|gb|EME28613.1| U2-associated protein SR14 isoform 2 [Galdieria sulphuraria]
Length = 605
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---------GKGCGFV 105
G GD T IF+G L+P+ T+E L + F ++G + S+KI G GFV
Sbjct: 124 GSHDSGDPLTTNIFLGNLNPSTTEETLLRTFGRFGPVGSIKIMYPRTPEEHLRGYNSGFV 183
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
F R++AE AL L GT++ VRL+WG+ LSP
Sbjct: 184 SFMERDDAEAALEALQGTLLDGFLVRLAWGKPVKRPLKPLSP 225
>gi|348535548|ref|XP_003455262.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oreochromis
niloticus]
Length = 427
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT+++GGL VTD DL+ F Q+GEI ++ I + C F+QFA R++AE A K
Sbjct: 228 DKSITTLYIGGLGDTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAETAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N +I + + + WGR+ A +
Sbjct: 288 FNKLIINGRRLTVKWGRSQAAR 309
>gi|432928337|ref|XP_004081149.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Oryzias latipes]
Length = 970
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 101
APG GD S T +++G ++P + +E L Q F +YG +ASVKI +
Sbjct: 198 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN 255
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 256 CGFVAFMNRRDAERALKHLNGKMIMNFEMKLGWGK 290
>gi|326925891|ref|XP_003209141.1| PREDICTED: u2-associated protein SR140-like [Meleagris gallopavo]
Length = 1036
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 261 SGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDE 318
Query: 97 --PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 319 ERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 360
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+ NT+++VG + TD DLR FS YG+IA V+I + FV++ +E A +A+ ++N
Sbjct: 324 ADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMN 383
Query: 122 GTVIGKQSVRLSWGRNPANKQASLSPF 148
G + VR SWGR A +L+P
Sbjct: 384 GKEMAGNQVRCSWGRTQAVPNQALNPL 410
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 120
+FVG L +V++E L+ F+++GE++ K+ KG GFV F N++NAE A+ +
Sbjct: 227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286
Query: 121 NGTVIGKQSVRLSWG 135
NG IGK++VR +W
Sbjct: 287 NGKWIGKRAVRTNWA 301
>gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 487
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 53 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
G+ P E D S T++VGG+D ++++DLR F +GEI S+K+ + +GC FV + R
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273
Query: 111 ENAEEALHKL-NGTVIGKQSVRLSWGRNPANK 141
E A +A +L N VI ++L WGR A K
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGRPQAPK 305
>gi|410909191|ref|XP_003968074.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Takifugu rubripes]
Length = 974
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 101
APG GD S T +++G ++P + +E L Q F +YG +ASVKI +
Sbjct: 199 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN 256
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 257 CGFVAFMNRRDAERALKHLNGKMIMNFEMKLGWGK 291
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
NT+++VG ++ N DEDLR F ++G I V+I +G FV+F +++A A+ K+NG
Sbjct: 288 DNTSVYVGNVNSNANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNG 347
Query: 123 TVIGKQSVRLSWGRNPA--NKQAS 144
+ Q+++ SWGR P N+QA+
Sbjct: 348 QELCGQNIKCSWGRTPEGHNQQAN 371
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 49 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 164 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 223
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 224 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 261
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
D T++VG LDP++T++ + F Q G + K+ FV+FA+ A +AL
Sbjct: 89 DHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQAL 148
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N V+ ++ ++++W P ++
Sbjct: 149 QAMNKRVLLEKEMKVNWATEPGSQ 172
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+ NT+++VG + P TD DLR FS YG+IA V++ + FV++ +E A +A+ ++N
Sbjct: 104 ADNTSVYVGNISPQTTDVDLRDSFSTYGDIAEVRVFKTQRYAFVRYEKKECATKAIMEMN 163
Query: 122 GTVIGKQSVRLSWGRNPA 139
G + VR SWGR A
Sbjct: 164 GKELAGNQVRCSWGRTQA 181
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 120
+FVG L +V++E L+ F ++GE++ K+ KG GFV F N++NAE A+ +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 121 NGTVIGKQSVRLSWG 135
NG IGK++VR +W
Sbjct: 67 NGKWIGKRAVRTNWA 81
>gi|432119575|gb|ELK38536.1| U2 snRNP-associated SURP motif-containing protein [Myotis davidii]
Length = 1052
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 277 SGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDE 334
Query: 97 --PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 335 ERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 376
>gi|384249712|gb|EIE23193.1| hypothetical protein COCSUDRAFT_23819 [Coccomyxa subellipsoidea
C-169]
Length = 464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D T++VGGL P V D+DLR F YGEI+S+KI + C FV +A R AE A +L
Sbjct: 214 DREIKTLYVGGLAPEVEDQDLRDHFYPYGEISSIKILSARHCAFVTYATRPAAERAAQEL 273
Query: 121 NGTVIGK-QSVRLSWGR 136
+I + Q +L WG+
Sbjct: 274 QHKLIVRGQRAKLMWGK 290
>gi|145347969|ref|XP_001418431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578660|gb|ABO96724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDP-NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
P Q D+S TT+FVGG+DP VT++D+ F QYGEI +++ K C F+ FA R
Sbjct: 221 PSQKLTPPEDASITTLFVGGVDPEKVTEDDINSRFYQYGEIKGIRVIGTKKCAFITFATR 280
Query: 111 ENAEEALHKLNGTV-IGKQSVRLSWGRNPANK 141
E AE+A + I + RL WG++ A K
Sbjct: 281 EGAEKAAEDAAINLEINGERCRLQWGKSAAKK 312
>gi|158828226|gb|ABW81104.1| unknown [Cleome spinosa]
Length = 504
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGL+ + ++D+R F YGEI S++I K C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILPEKACAFVTYTTREGAEKATEEL 283
Query: 121 -NGTVIGKQSVRLSWGR 136
N V+ Q ++L+WGR
Sbjct: 284 CNKLVVNGQRLKLTWGR 300
>gi|195123969|ref|XP_002006474.1| GI21069 [Drosophila mojavensis]
gi|193911542|gb|EDW10409.1| GI21069 [Drosophila mojavensis]
Length = 936
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 189 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 248
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
++AE AL LNG I +RL WG+
Sbjct: 249 KDAERALRTLNGRYIMGYEMRLGWGKT 275
>gi|402589265|gb|EJW83197.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 231
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
++NT+++VGG+ P TDE+L Q FS + V++ +G FV++ N++ A A+ +N
Sbjct: 123 AANTSVYVGGISPVTTDEELMQSFSAIATVIEVRLFKQQGYAFVRYLNKDAAARAIMSMN 182
Query: 122 GTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
G VI Q +R SW R + L T S++F
Sbjct: 183 GKVINGQKIRCSWSRTAMDNN-DLVLCTCSSKF 214
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF 107
Q P+ + S N +FVG L V + L+ F +GEI+ K+ KG GFV F
Sbjct: 11 QSPKVD-TSKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVSF 69
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWG 135
+ENA++A+ ++NG +IG++ +R +W
Sbjct: 70 PVKENAQKAIEEMNGQMIGRRQIRTNWA 97
>gi|27819958|gb|AAL39666.2| LD23810p, partial [Drosophila melanogaster]
Length = 958
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 211 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 270
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
++AE AL LNG I +RL WG+
Sbjct: 271 KDAERALKTLNGRYIMGYEMRLGWGK 296
>gi|345325652|ref|XP_003430942.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein-like [Ornithorhynchus anatinus]
Length = 1079
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 355 SGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDE 412
Query: 97 --PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 413 ERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 454
>gi|19922658|ref|NP_611535.1| CG9346 [Drosophila melanogaster]
gi|7291222|gb|AAF46654.1| CG9346 [Drosophila melanogaster]
gi|220947134|gb|ACL86110.1| CG9346-PA [synthetic construct]
gi|220956694|gb|ACL90890.1| CG9346-PA [synthetic construct]
Length = 957
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
++AE AL LNG I +RL WG+
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWGK 295
>gi|195585268|ref|XP_002082411.1| GD11555 [Drosophila simulans]
gi|194194420|gb|EDX07996.1| GD11555 [Drosophila simulans]
Length = 989
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
++AE AL LNG I +RL WG+
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWGK 295
>gi|384249677|gb|EIE23158.1| hypothetical protein COCSUDRAFT_42089 [Coccomyxa subellipsoidea
C-169]
Length = 986
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCG 103
G G +GD T ++VG L P++ +E L++ F ++G+IASVKI G+ CG
Sbjct: 157 GAGSFDDGDPYTTNLYVGNLAPDIDEEVLKREFGRFGDIASVKIMWPRDEDQRRRGRNCG 216
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
FV F R A+ A LNG ++ ++L WG++
Sbjct: 217 FVAFMTRAGADRAKADLNGAILHDLELKLGWGKS 250
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 49 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q++ D+S + IFVG L P++ LR+ F +G I+ KI KG
Sbjct: 69 NWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKG 128
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG----RNPANKQASLSPFTSSTQFKK 156
GFV + R+ AE A++ +NG IG +++R +W PA K+ + P T FKK
Sbjct: 129 YGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKK 187
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
+N T++ GG+ +T++ +R F ++G+I +++ KG F+++ +E A EA+ K++
Sbjct: 191 TNCTVYCGGILSGLTEDLVRSAFGEHGKIEEIRVFKDKGYAFIRYNTKEAATEAIVKMHQ 250
Query: 123 TVIGKQSVRLSWGRNPANKQA 143
T +G +V+ SWG+ + A
Sbjct: 251 TEVGGHTVKCSWGKESKDSPA 271
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 68 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG---CGFVQFANRENAEEALHKLNGTV 124
+VG LDP VT++ L F G KI G FV+F+ +A AL +N
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIHETGNEPYAFVEFSEHSSAALALGTMNKRT 60
Query: 125 IGKQSVRLSWGRNPANK 141
+ ++++W +P +
Sbjct: 61 CFGREMKVNWATSPGTQ 77
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FV L VT+ +L+ F +G + K+P K CGFVQ+ +R +AE A+ KL
Sbjct: 275 DRNNTTLFVSSLSHMVTENELKAFFQPFGNVIYAKLPENKQCGFVQYVDRASAEMAILKL 334
Query: 121 NGTVIGKQSVRLSWGR 136
G I +++SWGR
Sbjct: 335 QGFPIRGSRIKISWGR 350
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 15/123 (12%)
Query: 24 CFHRNSSYCQFNIVFLL--VLIGGYAS-----NGAPGQGPQSEGDSSNTTIFVGGLDPNV 76
CF + SS Q + L + I GY S N + G ++G S+ ++FVG L PNV
Sbjct: 96 CFVQFSSRSQASNALLKNGMAIPGYPSKTLRLNWSSASGNSADG-SNEISVFVGDLAPNV 154
Query: 77 TDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQS 129
T+ DL + F S+ ++ K+ V KG FV+F N+E+ + AL ++ GT + ++
Sbjct: 155 TESDLFELFISKCPSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQRALQEMTGTFLKGRA 214
Query: 130 VRL 132
+R+
Sbjct: 215 IRV 217
>gi|82400164|gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 462
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 53 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 110
G+ P E D S T++VGG+D ++++DLR F +GEI S+K+ + +GC FV + R
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273
Query: 111 ENAEEALHKL-NGTVIGKQSVRLSWGRNPANK 141
E A +A +L N VI ++L WGR A K
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGRPQAPK 305
>gi|195027159|ref|XP_001986451.1| GH20523 [Drosophila grimshawi]
gi|193902451|gb|EDW01318.1| GH20523 [Drosophila grimshawi]
Length = 969
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 213 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 272
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
++AE AL LNG I +RL WG+
Sbjct: 273 KDAERALRTLNGRYIMGYEMRLGWGKT 299
>gi|405969462|gb|EKC34433.1| hypothetical protein CGI_10025795 [Crassostrea gigas]
Length = 2718
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---------GKGCGFV 105
GP D + T I+VG ++P +T+ +L + F ++G +ASVKI G+ CGFV
Sbjct: 1191 GPYDPVDETTTNIYVGNINPKMTEPELCEIFGRFGPLASVKIMWPRTDEERSRGRNCGFV 1250
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR++ E AL+ L G I + ++L WG+
Sbjct: 1251 AFMNRKDGERALNALKGKDIMQYEMKLGWGK 1281
>gi|395528085|ref|XP_003766162.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Sarcophilus harrisii]
Length = 1186
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 412 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 469
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 470 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 510
>gi|195346271|ref|XP_002039689.1| GM15794 [Drosophila sechellia]
gi|194135038|gb|EDW56554.1| GM15794 [Drosophila sechellia]
Length = 957
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
++AE AL LNG I +RL WG+
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWGK 295
>gi|195486673|ref|XP_002091605.1| GE12157 [Drosophila yakuba]
gi|194177706|gb|EDW91317.1| GE12157 [Drosophila yakuba]
Length = 960
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 205 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 264
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ +R++AE AL LNG I +RL WG+
Sbjct: 265 AYMSRKDAERALRTLNGRYIMGYEMRLGWGK 295
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q+ GD NT+++VG + N+++ED+RQ F+ YG I+ V+I +G FV+F N++ A +A
Sbjct: 231 QTSGD--NTSVYVGNI-ANLSEEDIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKA 287
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ ++N +G Q VR SWG+
Sbjct: 288 IVQMNNQEVGGQLVRCSWGK 307
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 118 PGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 177
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 178 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 215
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 121
T++VG LDP V+++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 43 TLYVGNLDPTVSEDFVATLFNQIGSVTKTKV-IFDGANDPYAFVEFSDHAQASQALQTMN 101
Query: 122 GTVIGKQSVRLSWGRNPANKQASLS 146
++ + ++++W P + + +
Sbjct: 102 KRLLLDREMKVNWAVEPGQQPSKID 126
>gi|195455607|ref|XP_002074793.1| GK22959 [Drosophila willistoni]
gi|194170878|gb|EDW85779.1| GK22959 [Drosophila willistoni]
Length = 929
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 210 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 269
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ +R++AE AL LNG + +RL WG+
Sbjct: 270 AYMSRKDAERALRTLNGRYVMGYEMRLGWGK 300
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 11/92 (11%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQF 107
+ PQS + TT+F+G L NVT++++R+ FSQYG++ SV+ P KG G+V++
Sbjct: 273 EAPQS---APTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEY 329
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSW--GRN 137
+ E A++A+ LNG I +S+RL + GR+
Sbjct: 330 GDVETAQKAVEGLNGVEIAGRSLRLDYAGGRD 361
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFV 105
P + P++E + N+T+FVG L NV +E L F+ G + S +I KG G+V
Sbjct: 171 PTKKPKTE-EPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYV 229
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRL 132
F + +A A L GT + + +R+
Sbjct: 230 TFES-ADALTAAMALTGTELDGREIRV 255
>gi|170589631|ref|XP_001899577.1| RNA recognition motif. [Brugia malayi]
gi|158593790|gb|EDP32385.1| RNA recognition motif [Brugia malayi]
Length = 287
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
++NT+++VGG+ P TDE+L Q FS + V++ +G FV++ N++ A A+ +N
Sbjct: 204 AANTSVYVGGISPITTDEELMQSFSAIATVIEVRLFKQQGYAFVRYLNKDAAARAIMSMN 263
Query: 122 GTVIGKQSVRLSWGR 136
G VI Q +R SW R
Sbjct: 264 GKVINGQKIRCSWSR 278
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV-----KIPV------------------ 98
S N +FVG L V + L+ F +GEI+SV +P+
Sbjct: 82 SKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLASLSCFSEAKVIRDP 141
Query: 99 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135
KG GFV F +ENA++A+ ++NG +IG++ +R +W
Sbjct: 142 QTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWA 182
>gi|149018881|gb|EDL77522.1| rCG25679, isoform CRA_c [Rattus norvegicus]
Length = 784
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 19 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 78
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 79 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 109
>gi|157131270|ref|XP_001655847.1| gar2, putative [Aedes aegypti]
gi|108871595|gb|EAT35820.1| AAEL012045-PA, partial [Aedes aegypti]
Length = 954
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P +++++L + F +YG +AS+KI G+ CGFV
Sbjct: 185 GSFDNGDPNTTNLYLGNLNPKISEQELMELFGKYGPLASIKIMWPRSEEERARGRNCGFV 244
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
+ +R +AE AL LNG + ++L WG++
Sbjct: 245 AYMSRRDAERALRALNGKEVMNYLMKLGWGKS 276
>gi|410913889|ref|XP_003970421.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Takifugu rubripes]
Length = 426
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT+++GGL NVTD DL+ F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYIGGLGDNVTDGDLKNFFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N +I + + + WGR+ A +
Sbjct: 288 FNKLIINGRRLTVKWGRSQAAR 309
>gi|194383074|dbj|BAG59093.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|401399032|ref|XP_003880458.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
gi|325114868|emb|CBZ50424.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
Length = 400
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQYAFLCYAERSSAEEAVKQ 287
Query: 120 LNGTVIGK-QSVRLSWGRNPANKQ 142
L+ ++ K +R++W + P++K+
Sbjct: 288 LHSNLVIKGVRLRVAWAK-PSDKR 310
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+ NT+++VG + TD DLR FS YG+IA V++ + FV++ +E A +A+ ++N
Sbjct: 291 ADNTSVYVGNISQQTTDADLRDSFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMN 350
Query: 122 GTVIGKQSVRLSWGRNPANKQASLSPF 148
G + VR SWGR A +L+P
Sbjct: 351 GKEMAGNQVRCSWGRTQAVPNQALNPL 377
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 120
+FVG L +V+++ L+ F +YGE++ K+ KG GFV F N++NAE A+ +
Sbjct: 194 VFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 253
Query: 121 NGTVIGKQSVRLSWG 135
NG IGK++VR +W
Sbjct: 254 NGKWIGKRAVRTNWA 268
>gi|357614550|gb|EHJ69142.1| hypothetical protein KGM_18723 [Danaus plexippus]
Length = 877
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 102
P G GD + T +++G L+P +T++ L + F +YG +AS+KI G+ C
Sbjct: 149 PDVGSYDTGDPNTTNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNC 208
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
GFV F +R++ E AL +NG I ++L WG+
Sbjct: 209 GFVAFMSRKDGERALRCINGKEIMNYEMKLGWGK 242
>gi|348581626|ref|XP_003476578.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cavia porcellus]
Length = 937
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 164 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 221
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 222 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 262
>gi|344244393|gb|EGW00497.1| U2-associated protein SR140 [Cricetulus griseus]
Length = 649
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 164 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 223
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 224 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 254
>gi|449278574|gb|EMC86385.1| U2-associated protein SR140 [Columba livia]
Length = 965
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 191 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 248
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 249 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 289
>gi|76163139|gb|AAX30926.2| SJCHGC08802 protein [Schistosoma japonicum]
Length = 171
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT+++GG+ +T++DLR F Q+GE+ SV + + C F+QFA R AE A +
Sbjct: 81 DRTITTLYIGGIPDGMTEKDLRNHFYQFGELRSVNLHAKQHCAFIQFATRSAAERAAERT 140
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASLS 146
+ ++G + ++WG++PA A+ S
Sbjct: 141 YDRLILGGHRLTVNWGKSPAALAAANS 167
>gi|281342682|gb|EFB18266.1| hypothetical protein PANDA_005047 [Ailuropoda melanoleuca]
Length = 954
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 226 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 283
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 284 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 324
>gi|449509637|ref|XP_002195693.2| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Taeniopygia guttata]
Length = 961
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 187 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 244
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 245 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 285
>gi|431899775|gb|ELK07722.1| U2-associated protein SR140 [Pteropus alecto]
Length = 1041
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 268 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 325
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 326 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 366
>gi|355721758|gb|AES07367.1| U2-associated SR140 protein [Mustela putorius furo]
Length = 1008
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 272 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 329
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 330 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 370
>gi|293349374|ref|XP_002727165.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Rattus norvegicus]
gi|293361281|ref|XP_002730000.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Rattus norvegicus]
Length = 985
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 212 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 269
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 270 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 310
>gi|171460908|ref|NP_080752.2| U2 snRNP-associated SURP motif-containing protein isoform 2 [Mus
musculus]
Length = 985
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 212 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 269
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 270 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 310
>gi|126338260|ref|XP_001372201.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein
[Monodelphis domestica]
Length = 1034
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 260 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 317
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 318 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 358
>gi|432878644|ref|XP_004073359.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oryzias latipes]
Length = 426
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT+++GGL NVTD DL+ F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGDNVTDGDLKGHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLILNGRRLTVKWGRSQAAR 309
>gi|170058302|ref|XP_001864863.1| U2-associated SR140 protein [Culex quinquefasciatus]
gi|167877443|gb|EDS40826.1| U2-associated SR140 protein [Culex quinquefasciatus]
Length = 603
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 174 GSFDNGDPNTTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEERARGRNCGFV 233
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
+ +R +AE AL LNG + ++L WG++
Sbjct: 234 AYMSRRDAERALRALNGKDVMNYEMKLGWGKS 265
>gi|320166721|gb|EFW43620.1| Rbm22 protein [Capsaspora owczarzaki ATCC 30864]
Length = 409
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D S TT++VG LD +++++DLR F Q+GEI S+ I C FV F R AE A +
Sbjct: 270 ADKSITTLYVGNLDDSISEDDLRDYFYQFGEIRSITISRKAACAFVAFTTRLFAEAAAER 329
Query: 120 -LNGTVIGKQSVRLSWGRNPANK 141
N +I + +++ WG++ AN+
Sbjct: 330 SYNKAIIHDRKLKIMWGKSAANQ 352
>gi|354466181|ref|XP_003495553.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cricetulus griseus]
Length = 919
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|410355679|gb|JAA44443.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1033
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 260 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 317
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 318 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 358
>gi|410227838|gb|JAA11138.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1034
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 261 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 318
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 319 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 359
>gi|327267007|ref|XP_003218294.1| PREDICTED: u2-associated protein SR140-like [Anolis carolinensis]
Length = 989
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 222 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 281
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 282 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 312
>gi|395832941|ref|XP_003789509.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Otolemur garnettii]
Length = 1027
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 254 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 311
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 312 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 352
>gi|149729916|ref|XP_001493107.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein [Equus
caballus]
Length = 1029
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|119599362|gb|EAW78956.1| hCG27481, isoform CRA_b [Homo sapiens]
Length = 998
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 233 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 292
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 293 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 323
>gi|380811072|gb|AFE77411.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
gi|383416995|gb|AFH31711.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
gi|384946074|gb|AFI36642.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
Length = 1028
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|209364570|ref|NP_001127512.1| U2 snRNP-associated SURP motif-containing protein [Pongo abelii]
gi|75070608|sp|Q5R7X2.1|SR140_PONAB RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
gi|55730839|emb|CAH92138.1| hypothetical protein [Pongo abelii]
Length = 1028
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|358333735|dbj|GAA52209.1| U2-associated protein SR140 [Clonorchis sinensis]
Length = 1340
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 109
+GD + T +F+G L+P +T++ L + F +YG +ASVKI G+ CGFV F N
Sbjct: 283 DGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTDEERSRGRNCGFVAFMN 342
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRN 137
R++ E AL + G + ++L WG++
Sbjct: 343 RKDGERALDNIRGKELMGFEMKLGWGKS 370
>gi|426218190|ref|XP_004003332.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Ovis
aries]
Length = 1029
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|335299677|ref|XP_003358644.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Sus
scrofa]
Length = 1029
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|62654101|ref|XP_236501.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Rattus norvegicus]
gi|109485106|ref|XP_001065014.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Rattus norvegicus]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|76608208|ref|XP_877060.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
isoform 6 [Bos taurus]
gi|297471247|ref|XP_002685082.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Bos
taurus]
gi|296491010|tpg|DAA33108.1| TPA: U2-associated SR140 protein [Bos taurus]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|410355677|gb|JAA44442.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1028
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 255 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 312
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 313 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|351694957|gb|EHA97875.1| U2-associated protein SR140 [Heterocephalus glaber]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|345789304|ref|XP_534297.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Canis
lupus familiaris]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|332232395|ref|XP_003265391.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Nomascus leucogenys]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|291399919|ref|XP_002716620.1| PREDICTED: U2-associated SR140 protein [Oryctolagus cuniculus]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|114589671|ref|XP_516796.2| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Pan
troglodytes]
gi|410227836|gb|JAA11137.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|122937227|ref|NP_001073884.1| U2 snRNP-associated SURP motif-containing protein [Homo sapiens]
gi|301762984|ref|XP_002916912.1| PREDICTED: u2-associated protein SR140-like [Ailuropoda
melanoleuca]
gi|397512450|ref|XP_003826558.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Pan
paniscus]
gi|402861319|ref|XP_003895045.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Papio
anubis]
gi|403278804|ref|XP_003930975.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Saimiri boliviensis boliviensis]
gi|147668553|sp|O15042.2|SR140_HUMAN RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
gi|168267304|dbj|BAG09708.1| U2-associated protein SR140 [synthetic construct]
gi|387273401|gb|AFJ70195.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|126341354|ref|XP_001368859.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Monodelphis domestica]
Length = 984
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 43 IGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---- 98
I + APG GD S T +++G ++P V +E L Q F ++G +ASVKI
Sbjct: 212 ISSVPDDYAPGS--HDVGDPSTTNLYLGNINPQVNEEMLCQEFGRFGPLASVKIMWPRTD 269
Query: 99 -----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL L+G +I ++L WG+
Sbjct: 270 QERGRKRNCGFVAFMNRIDAERALKNLHGKMIMSFEMKLGWGK 312
>gi|119599363|gb|EAW78957.1| hCG27481, isoform CRA_c [Homo sapiens]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|2224605|dbj|BAA20790.1| KIAA0332 [Homo sapiens]
gi|23336900|tpg|DAA00075.1| TPA_exp: U2-associated SR140 protein [Homo sapiens]
Length = 1028
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 255 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 312
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 313 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|296227904|ref|XP_002759567.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Callithrix jacchus]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|440911806|gb|ELR61439.1| U2-associated protein SR140 [Bos grunniens mutus]
Length = 1035
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|426342412|ref|XP_004037839.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein [Gorilla gorilla gorilla]
Length = 1037
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|417405635|gb|JAA49525.1| Putative splicing regulator [Desmodus rotundus]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|171460910|ref|NP_001108449.1| U2 snRNP-associated SURP motif-containing protein isoform 1 [Mus
musculus]
gi|341942111|sp|Q6NV83.3|SR140_MOUSE RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|302800509|ref|XP_002982012.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
gi|300150454|gb|EFJ17105.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
Length = 398
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A L
Sbjct: 220 DTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 279
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
+ V+ ++L WG+ A K
Sbjct: 280 AHKLVVNGVRLKLMWGKPQAAK 301
>gi|344288968|ref|XP_003416218.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Loxodonta africana]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|297286711|ref|XP_001107114.2| PREDICTED: u2-associated protein SR140-like [Macaca mulatta]
Length = 1029
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|149018880|gb|EDL77521.1| rCG25679, isoform CRA_b [Rattus norvegicus]
Length = 1028
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|13623693|gb|AAH06474.1| Unknown (protein for IMAGE:2820942), partial [Homo sapiens]
Length = 1027
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 262 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 321
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 322 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 352
>gi|194754789|ref|XP_001959677.1| GF11923 [Drosophila ananassae]
gi|190620975|gb|EDV36499.1| GF11923 [Drosophila ananassae]
Length = 963
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
G ++N A G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 201 GSKSANNARDSGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEE 260
Query: 97 --PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
G+ CGFV + +R++AE AL LN I ++L WG+
Sbjct: 261 EKQRGRNCGFVAYMSRKDAERALRALNCRYIMGNKMQLGWGK 302
>gi|148688989|gb|EDL20936.1| RIKEN cDNA 2610101N10 [Mus musculus]
Length = 1028
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG +I ++L WG+
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|308153271|ref|NP_001184003.1| U2-associated SR140 protein-like [Danio rerio]
Length = 968
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PV 98
+ APG GD + T +++G ++P + +E L Q F +YG +ASVKI
Sbjct: 193 DDSAPGS--HDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERAR 250
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F R +AE AL LNG +I ++L WG+
Sbjct: 251 ERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGK 288
>gi|213983047|ref|NP_001135684.1| U2 snRNP-associated SURP domain containing [Xenopus (Silurana)
tropicalis]
gi|197245900|gb|AAI68618.1| Unknown (protein for MGC:186104) [Xenopus (Silurana) tropicalis]
Length = 970
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 206 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 265
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F NR +AE AL LNG ++ ++L WG+
Sbjct: 266 AFMNRRDAERALKNLNGKMVMNFEMKLGWGK 296
>gi|322786770|gb|EFZ13115.1| hypothetical protein SINV_15313 [Solenopsis invicta]
Length = 320
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV F +R
Sbjct: 192 GDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAFMSR 251
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
++ E AL LNG I + ++L WG++
Sbjct: 252 KDGERALKNLNGRDIMQYEMKLGWGKS 278
>gi|302808802|ref|XP_002986095.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
gi|300146243|gb|EFJ12914.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
Length = 366
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A L
Sbjct: 220 DTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 279
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
+ V+ ++L WG+ A K
Sbjct: 280 AHKLVVNGVRLKLMWGKPQAAK 301
>gi|302837077|ref|XP_002950098.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
gi|300264571|gb|EFJ48766.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
Length = 1079
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD T ++VG L P V +E L+ F ++G IASVK+ G+ CGFV F R
Sbjct: 217 GDPFTTNLYVGNLAPEVDEEVLKIEFGRFGAIASVKVMWPRDEEQRRKGRNCGFVAFMRR 276
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
++AE A+ KLNG + + + WG+
Sbjct: 277 DDAETAMRKLNGITLHGNELHIGWGK 302
>gi|45946398|gb|AAH68265.1| RIKEN cDNA 2610101N10 gene [Mus musculus]
Length = 985
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 212 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 269
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F +R +AE AL LNG +I ++L WGR
Sbjct: 270 RARERNCGFVAFMSRRDAERALKNLNGKMIMSFEMKLGWGR 310
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
NT+++VG ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG
Sbjct: 242 DNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNG 301
Query: 123 TVIGKQSVRLSWGRNPA--NKQAS 144
+ Q+++ SWGR P N+QA+
Sbjct: 302 QELCGQNIKCSWGRTPEGHNQQAN 325
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 49 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 118 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 177
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 178 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 215
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
D T++VG LDP++T++ + F Q G + K+ FV+FA+ A +AL
Sbjct: 43 DHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQAL 102
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N V+ ++ ++++W P ++
Sbjct: 103 QAMNKRVLLEKEMKVNWATEPGSQ 126
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
NT+++VG ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG
Sbjct: 269 DNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNG 328
Query: 123 TVIGKQSVRLSWGRNPA--NKQAS 144
+ Q+++ SWGR P N+QA+
Sbjct: 329 QELCGQNIKCSWGRTPEGHNQQAN 352
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 49 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 145 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 204
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 205 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 242
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
D T++VG LDP++T++ + F Q G + K+ FV+FA+ A +AL
Sbjct: 70 DHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQAL 129
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N V+ ++ ++++W P ++
Sbjct: 130 QAMNKRVLLEKEMKVNWATEPGSQ 153
>gi|256075299|ref|XP_002573957.1| rna binding motif protein [Schistosoma mansoni]
gi|360044844|emb|CCD82392.1| putative rna binding motif protein [Schistosoma mansoni]
Length = 425
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT+++GG+ +T++DLR F Q+GE+ SV + + C F+QFA R AE A +
Sbjct: 244 DRTITTLYIGGIPDGMTEKDLRNHFYQFGELRSVNLHAKQHCAFIQFATRGAAERAAERT 303
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASLSPFTSST 152
+ ++G + ++WG++PA A+ S ++ T
Sbjct: 304 YDRLILGGHRLTVNWGKSPAALAAANSHSSTET 336
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+++ D N ++VG L P+V+D +L+ SQ+G + VKI G F QFA+ +A A
Sbjct: 208 RAQADPENANVYVGNLAPDVSDAELQTAVSQFGAVLDVKIYRKGGYAFAQFASHADAVRA 267
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANK 141
+ L+G +G ++++ SWGR+ A K
Sbjct: 268 IVGLSGQNLGGKALKCSWGRHQARK 292
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 113
GD++ ++VG L P VTD L++ FS G++ +KI K G GFVQF + A
Sbjct: 18 GDAAKA-LYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAA 76
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPF 148
+ AL LNG V+ Q +R++W ++ S S F
Sbjct: 77 DMALQSLNGRVLHGQELRVNWAFQKDQREDSASQF 111
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQF 107
Q Q E +S IFVG L ++ D+ L + F G A ++ KG GFV F
Sbjct: 100 QKDQREDSASQFQIFVGDLASDINDKLLCEAFQSCG-CADARVMWDHNTGRSKGYGFVSF 158
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPA-NKQASLSPFTSSTQFKKIEYN 160
R +AE+AL +++GT++G + +R W ++ N QAS + + + + +
Sbjct: 159 KTRADAEQALSQMSGTMLGSRRIRCGWAQHKQENSQASFAAVDRVSTLSRAQAD 212
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q+ GD NT+++VG + N+T++++RQ F+ YG I+ V+I +G FV+F N+ A +A
Sbjct: 231 QTSGD--NTSVYVGNI-ANLTEDEIRQAFASYGRISEVRIFKMQGYAFVKFENKNAAAKA 287
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ ++N +G Q VR SWG+
Sbjct: 288 ITEMNNQDVGGQMVRCSWGK 307
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 118 PGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFV 177
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 178 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 121
T++VG LDP+V+++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 43 TLYVGNLDPSVSEDFIATLFNQIGSVTKTKV-IHDGANDPYAFVEFSDHGQASQALQTMN 101
Query: 122 GTVIGKQSVRLSWGRNPANKQASL 145
++ + ++++W P + + +
Sbjct: 102 KRLLHDREMKVNWAVEPGQQPSKI 125
>gi|353239139|emb|CCA71062.1| hypothetical protein PIIN_04997 [Piriformospora indica DSM 11827]
Length = 393
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D NT +FVGG+ P V ++L F+ G I +V GKGC F+ FA + +A A+ +L
Sbjct: 162 DPKNTKVFVGGISPRVLLQELVNRFAAMGVITNVNF--GKGCAFISFARKHDAALAIERL 219
Query: 121 NGTVIGKQSVRLSWGRN 137
+G ++ +S+R++W R+
Sbjct: 220 DGMIMDGKSLRVTWSRS 236
>gi|221504135|gb|EEE29812.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii VEG]
Length = 400
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAERSSAEEAVKQ 287
Query: 120 LNGTVIGK-QSVRLSWG 135
L+ ++ K +R++W
Sbjct: 288 LHSNLVIKGVRLRVAWA 304
>gi|241710461|ref|XP_002403460.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215505106|gb|EEC14600.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 566
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT++VG L +T++DLR F QYGEI + + C FVQF +R +AE A K
Sbjct: 228 DGSITTLYVGNLGERLTEKDLRDHFYQYGEIRQITMLARHQCAFVQFTSRTSAELAADKT 287
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQ 153
N ++ + + + WGR A + +++P S ++
Sbjct: 288 FNKLILAGRRLVIKWGRALARSEPAIAPTPSQSR 321
>gi|149064345|gb|EDM14548.1| RNA binding motif protein 22, isoform CRA_a [Rattus norvegicus]
Length = 377
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+E S N T+++G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+
Sbjct: 225 NETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAI 284
Query: 118 HKLNGTVIGKQSVRLSWGR 136
NG +I ++R SWGR
Sbjct: 285 LMCNGKIINGSTLRCSWGR 303
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEAL 117
N IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+
Sbjct: 128 NYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAM 187
Query: 118 HKLNGTVIGKQSVRLSW 134
+NG + ++++++W
Sbjct: 188 QMMNGEKLEGRNIKVNW 204
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 115
++++ ++ V G+ +V + L + FS G + S KI V G GFV+F + A
Sbjct: 39 NANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHAGYGFVEFVDSTTARF 98
Query: 116 ALHKLNGTVIGKQSVRLSW 134
A ++G V+ + ++++W
Sbjct: 99 AKDNMDGRVVYGRELKVNW 117
>gi|383849266|ref|XP_003700266.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Megachile rotundata]
Length = 967
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV F +R
Sbjct: 220 GDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAFMSR 279
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
++ E AL LNG I + ++L WG++
Sbjct: 280 KDGERALKNLNGRDIMQYEMKLGWGKS 306
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+E S N T+++G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+
Sbjct: 225 NETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAI 284
Query: 118 HKLNGTVIGKQSVRLSWGR 136
NG +I ++R SWGR
Sbjct: 285 LMCNGKIINGSTLRCSWGR 303
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEAL 117
N IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+
Sbjct: 128 NYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAM 187
Query: 118 HKLNGTVIGKQSVRLSW 134
+NG + ++++++W
Sbjct: 188 QMMNGEKLEGRNIKVNW 204
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 52 PGQGPQSEGDSS------NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGK 100
P Q DSS + ++ V G+ +V + L + FS G + S KI V
Sbjct: 24 PQQNSTETTDSSLPINANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHA 83
Query: 101 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
G GFV+F + A A ++G V+ + ++++W
Sbjct: 84 GYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNW 117
>gi|237840441|ref|XP_002369518.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|211967182|gb|EEB02378.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|221483211|gb|EEE21535.1| lysine-specific histone demethylase, putative [Toxoplasma gondii
GT1]
Length = 400
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAERSSAEEAVKQ 287
Query: 120 LNGTVIGK-QSVRLSWG 135
L+ ++ K +R++W
Sbjct: 288 LHSNLVIKGVRLRVAWA 304
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+ NT+++VG + T+ DLR+ FS YG+IA V++ + FV++ +E A +A+ ++N
Sbjct: 232 ADNTSVYVGNISQQTTETDLRESFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMN 291
Query: 122 GTVIGKQSVRLSWGRNPANKQASLSPF 148
G + VR SWGR A +L+P
Sbjct: 292 GKELTGNQVRCSWGRTQAVPSQALNPL 318
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 120
+FVG L +V++E L+ F +YGE++ K+ KG GFV F N++NAE A+ +
Sbjct: 135 VFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 194
Query: 121 NGTVIGKQSVRLSWG 135
NG IGK++VR +W
Sbjct: 195 NGKWIGKRAVRTNWA 209
>gi|253723319|pdb|2YTC|A Chain A, Solution Structure Of Rna Binding Domain In Pre-Mrna-
Splicing Factor Rbm22
Length = 85
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 107
S+G+ G+ D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QF
Sbjct: 2 SSGSSGE------DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQF 55
Query: 108 ANRENAEEALHK-LNGTVIGKQSVRLSWGR 136
A R+ AE A K N ++ + + + WGR
Sbjct: 56 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGR 85
>gi|321462927|gb|EFX73947.1| hypothetical protein DAPPUDRAFT_215373 [Daphnia pulex]
Length = 899
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T I++G ++P +T++ L F +YG +ASVKI + CGFV F R
Sbjct: 170 GDPNTTNIYLGNINPKMTEQQLMDTFGKYGPLASVKIMWPRTEEEKARNRNCGFVAFMCR 229
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGR 136
++AE A+ KLNG I ++L WG+
Sbjct: 230 KDAERAMKKLNGKDILSFEMKLGWGK 255
>gi|307166394|gb|EFN60531.1| U2-associated protein SR140 [Camponotus floridanus]
Length = 1023
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV F +R
Sbjct: 279 GDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAFMSR 338
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
++ E AL LNG I + ++L WG++
Sbjct: 339 KDGERALKNLNGRDIMQYEMKLGWGKS 365
>gi|328793609|ref|XP_397019.4| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Apis mellifera]
Length = 966
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV F +R
Sbjct: 220 GDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAFMSR 279
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
++ E AL LNG I + ++L WG++
Sbjct: 280 KDGERALKNLNGRDIMQYEMKLGWGKS 306
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
NT+++VG ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG
Sbjct: 269 DNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNG 328
Query: 123 TVIGKQSVRLSWGRNP 138
+ Q+++ SWGR P
Sbjct: 329 QELCGQNIKCSWGRTP 344
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 49 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 145 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 204
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 205 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 242
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
D T++VG LDP++T++ + F Q G + K+ FV+FA+ A +AL
Sbjct: 70 DHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQAL 129
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N V+ ++ ++++W P ++
Sbjct: 130 QAMNKRVLLEKEMKVNWATEPGSQ 153
>gi|168027976|ref|XP_001766505.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682414|gb|EDQ68833.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL-HK 119
D S T++VGGL VT+EDL+ F YGEI S+++ + C FV + RE AE+A H
Sbjct: 224 DMSIKTLYVGGLVDRVTEEDLKDQFYGYGEIESIRMVPQRACAFVTYTTREGAEKAADHL 283
Query: 120 LNGTVIGKQSVRLSWGR 136
N VI ++L WGR
Sbjct: 284 ANKLVINGLRLKLMWGR 300
>gi|350410111|ref|XP_003488949.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Bombus impatiens]
Length = 968
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F +R++ E AL LNG I + ++L WG++
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 306
>gi|340720345|ref|XP_003398601.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Bombus terrestris]
Length = 968
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F +R++ E AL LNG I + ++L WG++
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 306
>gi|380026763|ref|XP_003697113.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein-like [Apis florea]
Length = 944
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV F +R
Sbjct: 198 GDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAFMSR 257
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
++ E AL LNG I + ++L WG++
Sbjct: 258 KDGERALKNLNGRDIMQYEMKLGWGKS 284
>gi|350410108|ref|XP_003488948.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Bombus impatiens]
Length = 937
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F +R++ E AL LNG I + ++L WG++
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 277
>gi|340720343|ref|XP_003398600.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Bombus terrestris]
Length = 937
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F +R++ E AL LNG I + ++L WG++
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 277
>gi|224067689|ref|XP_002198708.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Taeniopygia guttata]
Length = 420
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|71043848|ref|NP_001020847.1| pre-mRNA-splicing factor RBM22 [Rattus norvegicus]
gi|81907895|sp|Q4V7D7.1|RBM22_RAT RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|66910908|gb|AAH97991.1| RNA binding motif protein 22 [Rattus norvegicus]
Length = 420
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|357125138|ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Brachypodium distachyon]
Length = 488
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 50 GAPGQGPQ--SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 107
G G+ P D S T+++GGLD VT++DLR F +GEI S+++ + + C FV +
Sbjct: 211 GKAGEMPSLTPPDDESIRTLYIGGLDNRVTEQDLRDQFYAHGEIESIRMVLQRACAFVTY 270
Query: 108 ANRENAEEALHKL-NGTVIGKQSVRLSWGRNPANK 141
RE AE+A +L N VI ++L WG+ A +
Sbjct: 271 TTREGAEKAAEELANKLVIKGVRLKLMWGKPQAPR 305
>gi|355715639|gb|AES05392.1| RNA binding motif protein 22 [Mustela putorius furo]
Length = 393
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 235 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 294
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 295 FNKLIVNGRRLNVKWGRSQAAR 316
>gi|115471551|ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|75325391|sp|Q6Z358.1|C3H49_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 49;
Short=OsC3H49
gi|34394813|dbj|BAC84225.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113610910|dbj|BAF21288.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|222636833|gb|EEE66965.1| hypothetical protein OsJ_23846 [Oryza sativa Japonica Group]
Length = 486
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T+++GGLD VT++DLR F +GEI ++++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|383849268|ref|XP_003700267.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Megachile rotundata]
Length = 936
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F +R++ E AL LNG I + ++L WG++
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 277
>gi|444523963|gb|ELV13665.1| U2 snRNP-associated SURP motif-containing protein [Tupaia
chinensis]
Length = 708
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 245 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 302
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 303 RARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 343
>gi|387018642|gb|AFJ51439.1| pre-mRNA-splicing factor RBM22-like [Crotalus adamanteus]
Length = 421
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|115466664|ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|75321585|sp|Q5SNN4.1|C3H40_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 40;
Short=OsC3H40
gi|55773636|dbj|BAD72175.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113594971|dbj|BAF18845.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|125596196|gb|EAZ35976.1| hypothetical protein OsJ_20278 [Oryza sativa Japonica Group]
gi|215767752|dbj|BAG99980.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T+++GGL+ +T++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGIRLKLMWGKPQAPK 305
>gi|326928574|ref|XP_003210452.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Meleagris
gallopavo]
Length = 420
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|57525003|ref|NP_001006151.1| pre-mRNA-splicing factor RBM22 [Gallus gallus]
gi|82233932|sp|Q5ZM16.1|RBM22_CHICK RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|53127796|emb|CAG31227.1| hypothetical protein RCJMB04_3g16 [Gallus gallus]
Length = 420
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|255073423|ref|XP_002500386.1| predicted protein [Micromonas sp. RCC299]
gi|226515649|gb|ACO61644.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 312
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D S TT++VGG+D VT++ L+ F QYG+I+SV+ K C FV F +R AE+A +
Sbjct: 230 ADESITTLYVGGIDDRVTEDALKDAFYQYGQISSVRTLYAKNCAFVTFVDRAGAEKAAEE 289
Query: 120 LNG-TVIGKQSVRLSWGRNPANK 141
I + R+ WG++ K
Sbjct: 290 CGSRKAISGINARIMWGKSKKEK 312
>gi|327265402|ref|XP_003217497.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Anolis
carolinensis]
Length = 421
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|401404962|ref|XP_003881931.1| hypothetical protein NCLIV_016900 [Neospora caninum Liverpool]
gi|325116345|emb|CBZ51898.1| hypothetical protein NCLIV_016900 [Neospora caninum Liverpool]
Length = 894
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---------GKGC 102
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 168 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 227
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
GFV F +R AE A H L+G +R+ WG++ + SP
Sbjct: 228 GFVSFESRPQAEAAKHNLDGVAFYGMVIRIGWGKSVGRPVVAPSP 272
>gi|74195542|dbj|BAE39585.1| unnamed protein product [Mus musculus]
Length = 420
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|324509922|gb|ADY44154.1| Pre-mRNA-splicing factor RBM22 [Ascaris suum]
Length = 412
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 57 QSEGDSSNTTIFVGGLDP--NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
Q D++ TT++VG L P +T+ DLR F Q+GEI S+ + V +GC F+ F R+ AE
Sbjct: 226 QPPEDTTITTLYVGDLGPAGTITEADLRDYFYQFGEIRSLNVLVSRGCAFIAFTTRQAAE 285
Query: 115 EALHK-LNGTVIGKQSVRLSWGRNPANKQAS 144
A + N ++ + +++ WGR + Q +
Sbjct: 286 RAADRSFNKLILQGRRLKIRWGRPQVHTQET 316
>gi|431918047|gb|ELK17275.1| Pre-mRNA-splicing factor RBM22 [Pteropus alecto]
gi|440904796|gb|ELR55260.1| Pre-mRNA-splicing factor RBM22 [Bos grunniens mutus]
Length = 424
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 232 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 291
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 292 FNKLIVNGRRLNVKWGRSQAAR 313
>gi|444723694|gb|ELW64335.1| Pre-mRNA-splicing factor RBM22 [Tupaia chinensis]
Length = 428
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 236 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 295
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 296 FNKLIVNGRRLNVKWGRSQAAR 317
>gi|432098820|gb|ELK28315.1| Pre-mRNA-splicing factor RBM22 [Myotis davidii]
Length = 385
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 193 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 252
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 253 FNKLIVNGRRLNVKWGRSQAAR 274
>gi|148677878|gb|EDL09825.1| mCG6024, isoform CRA_c [Mus musculus]
Length = 421
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|355691758|gb|EHH26943.1| hypothetical protein EGK_17030 [Macaca mulatta]
Length = 421
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 289 FNKLIVNGRRLNVKWGRSQAAR 310
>gi|355750335|gb|EHH54673.1| hypothetical protein EGM_15557 [Macaca fascicularis]
Length = 421
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 289 FNKLIVNGRRLNVKWGRSQAAR 310
>gi|229577428|ref|NP_001153375.1| U2-associated SR140 protein [Nasonia vitripennis]
Length = 935
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P +T++ L++ F ++G +AS+KI + CGFV
Sbjct: 187 GSFDNGDPNTTNLYLGNLNPKITEQQLKKIFGKFGPLASIKIMWPRSDEEKARQRNCGFV 246
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F +R++ E AL LNG I + ++L WG++
Sbjct: 247 AFMSRKDGERALKSLNGRDIMQYEMKLGWGKS 278
>gi|260830806|ref|XP_002610351.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
gi|229295716|gb|EEN66361.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
Length = 435
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT+++GGL +T++DLR F Q+GEI S+ + + C F+QF +R AE A +
Sbjct: 228 DRSITTLYIGGLGDKITEQDLRDHFYQFGEIRSITMVARQQCAFIQFTSRPAAEMAAERT 287
Query: 120 LNGTVIGKQSVRLSWGRNPA 139
N +I + + + WGR+ A
Sbjct: 288 FNKLIINGRRLSVRWGRSQA 307
>gi|8922328|ref|NP_060517.1| pre-mRNA-splicing factor RBM22 [Homo sapiens]
gi|110625591|ref|NP_080052.1| pre-mRNA-splicing factor RBM22 [Mus musculus]
gi|383873093|ref|NP_001244425.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|73954184|ref|XP_546302.2| PREDICTED: pre-mRNA-splicing factor RBM22 [Canis lupus familiaris]
gi|114602891|ref|XP_001167240.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 2 [Pan
troglodytes]
gi|291387642|ref|XP_002710359.1| PREDICTED: RNA binding motif protein 22 [Oryctolagus cuniculus]
gi|332235023|ref|XP_003266703.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Nomascus leucogenys]
gi|344265156|ref|XP_003404652.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Loxodonta africana]
gi|348583291|ref|XP_003477406.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Cavia porcellus]
gi|397517732|ref|XP_003829060.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Pan paniscus]
gi|402873102|ref|XP_003900425.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Papio anubis]
gi|410949463|ref|XP_003981441.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Felis catus]
gi|426350648|ref|XP_004042882.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Gorilla gorilla gorilla]
gi|74762758|sp|Q9NW64.1|RBM22_HUMAN RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22; AltName: Full=Zinc
finger CCCH domain-containing protein 16
gi|75075716|sp|Q4R4J1.1|RBM22_MACFA RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|81913160|sp|Q8BHS3.1|RBM22_MOUSE RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|7022226|dbj|BAA91521.1| unnamed protein product [Homo sapiens]
gi|12053361|emb|CAB66867.1| hypothetical protein [Homo sapiens]
gi|13097297|gb|AAH03402.1| RNA binding motif protein 22 [Homo sapiens]
gi|26337089|dbj|BAC32229.1| unnamed protein product [Mus musculus]
gi|51480449|gb|AAH80205.1| RNA binding motif protein 22 [Mus musculus]
gi|60654947|gb|AAX32038.1| RNA binding motif protein 22 [synthetic construct]
gi|67971284|dbj|BAE01984.1| unnamed protein product [Macaca fascicularis]
gi|74151559|dbj|BAE38885.1| unnamed protein product [Mus musculus]
gi|74198886|dbj|BAE30665.1| unnamed protein product [Mus musculus]
gi|74212676|dbj|BAE31073.1| unnamed protein product [Mus musculus]
gi|74214020|dbj|BAE29427.1| unnamed protein product [Mus musculus]
gi|74223191|dbj|BAE40732.1| unnamed protein product [Mus musculus]
gi|117646096|emb|CAL38515.1| hypothetical protein [synthetic construct]
gi|119582115|gb|EAW61711.1| RNA binding motif protein 22, isoform CRA_b [Homo sapiens]
gi|208965472|dbj|BAG72750.1| RNA binding motif protein 22 [synthetic construct]
gi|296485163|tpg|DAA27278.1| TPA: pre-mRNA-splicing factor RBM22 [Bos taurus]
gi|380814544|gb|AFE79146.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|383419867|gb|AFH33147.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|384948134|gb|AFI37672.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|410207524|gb|JAA00981.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410255988|gb|JAA15961.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410291244|gb|JAA24222.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410354161|gb|JAA43684.1| RNA binding motif protein 22 [Pan troglodytes]
Length = 420
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|12858161|dbj|BAB31220.1| unnamed protein product [Mus musculus]
Length = 420
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|417400642|gb|JAA47250.1| Putative pre-mrna-splicing factor rbm22 [Desmodus rotundus]
Length = 420
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|296193255|ref|XP_002744418.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Callithrix jacchus]
Length = 420
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|119582116|gb|EAW61712.1| RNA binding motif protein 22, isoform CRA_c [Homo sapiens]
Length = 421
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 289 FNKLIVNGRRLNVKWGRSQAAR 310
>gi|197098656|ref|NP_001125624.1| pre-mRNA-splicing factor RBM22 [Pongo abelii]
gi|75070751|sp|Q5RAY5.1|RBM22_PONAB RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|55728671|emb|CAH91075.1| hypothetical protein [Pongo abelii]
Length = 420
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|61371511|gb|AAX43680.1| RNA binding motif protein 22 [synthetic construct]
Length = 421
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|255558830|ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus communis]
gi|223540280|gb|EEF41851.1| RNA binding motif protein, putative [Ricinus communis]
Length = 285
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD +T++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 42 DESIKTLYVGGLDARITEQDLRDNFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAEEL 101
Query: 121 -NGTVIGKQSVRLSWGR 136
N VI ++L WGR
Sbjct: 102 SNKLVIKGLRLKLMWGR 118
>gi|426229912|ref|XP_004009027.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 1 [Ovis aries]
Length = 430
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|403285535|ref|XP_003934078.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Saimiri boliviensis
boliviensis]
Length = 420
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|354488436|ref|XP_003506375.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 431
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 239 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 298
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 299 FNKLIVNGRRLNVKWGRSQAAR 320
>gi|281345654|gb|EFB21238.1| hypothetical protein PANDA_006585 [Ailuropoda melanoleuca]
Length = 376
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 184 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 243
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 244 FNKLIVNGRRLNVKWGRSQAAR 265
>gi|338713130|ref|XP_001917686.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
[Equus caballus]
Length = 421
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|406878247|gb|EKD27207.1| hypothetical protein ACD_79C00808G0004 [uncultured bacterium]
Length = 86
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
+ ++VGGL + T E L+ FS+YGE+ +VKI GKG GF++ + + +AE A +LNG +
Sbjct: 4 SKLYVGGLRYSTTVEKLKNLFSEYGEVKNVKIVGGKGIGFIEMSKQSDAESAKKELNGYI 63
Query: 125 IGKQSVRLSWGRNPANKQA 143
Q +R+ R P K+
Sbjct: 64 FDGQEIRVDVPRPPKKKRG 82
>gi|301765526|ref|XP_002918204.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Ailuropoda
melanoleuca]
Length = 454
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 262 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 321
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 322 FNKLIVNGRRLNVKWGRSQAAR 343
>gi|432114097|gb|ELK36142.1| Pre-mRNA-splicing factor RBM22 [Myotis davidii]
Length = 384
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DRTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + WGR+ A +
Sbjct: 288 FNKLIVNGPRLNVQWGRSQAAR 309
>gi|351702162|gb|EHB05081.1| Pre-mRNA-splicing factor RBM22 [Heterocephalus glaber]
Length = 420
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|148677877|gb|EDL09824.1| mCG6024, isoform CRA_b [Mus musculus]
Length = 436
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 243 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 302
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 303 FNKLIVNGRRLNVKWGRSQAAR 324
>gi|256084514|ref|XP_002578473.1| hypothetical protein [Schistosoma mansoni]
gi|353229225|emb|CCD75396.1| hypothetical protein Smp_161730 [Schistosoma mansoni]
Length = 1232
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 109
+GD + T +F+G L+P +T++ L + F +YG +ASVKI G+ CGFV F N
Sbjct: 218 DGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMN 277
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRN 137
R++ E AL + G + ++L WG++
Sbjct: 278 RKDGERALDNIRGKELMGFEMKLGWGKS 305
>gi|218197672|gb|EEC80099.1| hypothetical protein OsI_21840 [Oryza sativa Indica Group]
Length = 617
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 50 GAPGQGPQ--SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 107
G G+ P D S T+++GGL+ +T++DLR F +GEI S+++ + + C FV +
Sbjct: 343 GKAGEMPSLTPPDDESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTY 402
Query: 108 ANRENAEEALHKL-NGTVIGKQSVRLSWGRNPANK 141
RE AE+A +L N VI ++L WG+ A K
Sbjct: 403 TTREGAEKAAEELANKLVIKGIRLKLMWGKPQAPK 437
>gi|328701605|ref|XP_001946045.2| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Acyrthosiphon pisum]
Length = 938
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 110
GD + T +++G L+P +T+ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 184 GDPNTTNLYLGNLNPKITEAQLMEVFGKYGPLASIKIMWPRSDEEKARGRNCGFVAYMSR 243
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRN 137
++ E AL LNG + +++ WG++
Sbjct: 244 KDGERALKNLNGKDVMSYEMKMGWGKS 270
>gi|395817744|ref|XP_003782315.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Otolemur garnettii]
Length = 406
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGR 136
N ++ + + + WGR
Sbjct: 288 FNKLIVNGRRLNVKWGR 304
>gi|426229914|ref|XP_004009028.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 2 [Ovis aries]
Length = 417
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|83715976|ref|NP_001032907.1| pre-mRNA-splicing factor RBM22 [Bos taurus]
gi|115502617|sp|Q3B7L8.1|RBM22_BOVIN RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|78174395|gb|AAI07552.1| RNA binding motif protein 22 [Bos taurus]
Length = 420
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKFIVNGRRLNVKWGRSQAAR 309
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 120 PGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 179
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 180 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 217
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q+ GD NT+++VG + N++++++RQ F+ YG I+ V+I +G FV+F N++ A +A
Sbjct: 233 QTSGD--NTSVYVGNI-ANLSEDEIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKA 289
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ ++N +G Q VR SWG+
Sbjct: 290 IVQMNNQEVGGQLVRCSWGK 309
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 121
T++VG LDP+V+++ + F+Q G + K+ + G FV+F + A +AL +N
Sbjct: 45 TLYVGNLDPSVSEDLIATLFNQIGSVTKTKV-IFDGANDPYAFVEFLDHSQASQALQTMN 103
Query: 122 GTVIGKQSVRLSWGRNP 138
++ + ++++W P
Sbjct: 104 KRLLLDREMKVNWAVEP 120
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
+NTT+++GG+ +T+ +R+ FS YG I V+I KG F++F E+A A+ +NG
Sbjct: 206 TNTTVYIGGVTTGLTEGKMRETFSHYGHIQEVRIFPDKGYAFIRFMTHESAAHAIVSVNG 265
Query: 123 TVIGKQSVRLSWGRNPANKQASLSPFT 149
+ I V+ SWG+ ++ P T
Sbjct: 266 SQINGHMVKCSWGKESSDPLYQAQPNT 292
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 61 DSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENA 113
D+SN +FVG L V DL+ F+ +G+I+ ++ KG GFV F N+ +A
Sbjct: 97 DTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDA 156
Query: 114 EEALHKLNGTVIGKQSVRLSWG-RNP 138
E A+ +NG + +++R +W R P
Sbjct: 157 ENAIQGMNGQWLSGRAIRTNWATRKP 182
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
+ D+ T++VG LD VT+ + Q F Q G S K+ G FV+F +A
Sbjct: 8 DDDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAA 67
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG +I + V+++W P++ + S
Sbjct: 68 AALQTMNGRMILGKEVKVNWATTPSSMKKDTS 99
>gi|194384782|dbj|BAG59551.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 179 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 238
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 239 FNKLIVNGRRLNVKWGRSQAAR 260
>gi|195995479|ref|XP_002107608.1| hypothetical protein TRIADDRAFT_51296 [Trichoplax adhaerens]
gi|190588384|gb|EDV28406.1| hypothetical protein TRIADDRAFT_51296 [Trichoplax adhaerens]
Length = 828
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 102
PG G GD + T ++VG L+P++ ++ L + F +YG +ASVKI + C
Sbjct: 188 PGYGSYDTGDPNTTNLYVGNLNPSIDEDYLCKLFGEYGALASVKIMWPRTDEEKKRNRNC 247
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
GFV F R + ++AL LNG I + + + WG+
Sbjct: 248 GFVAFMTRTDGDKALRALNGKEIMEYELHVGWGK 281
>gi|148231899|ref|NP_001080776.1| pre-mRNA-splicing factor RBM22 [Xenopus laevis]
gi|82241534|sp|Q7ZXB5.1|RBM22_XENLA RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|28280011|gb|AAH45067.1| Cg14641-prov protein [Xenopus laevis]
Length = 417
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA R++AE A K
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAETAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|237834785|ref|XP_002366690.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|211964354|gb|EEA99549.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|221503520|gb|EEE29211.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 859
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 102
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 276 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 335
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
GFV F +R AE A H L+G +R+ WG++
Sbjct: 336 GFVSFESRPQAEAAKHNLDGVSFYGMVIRIGWGKS 370
>gi|312373605|gb|EFR21316.1| hypothetical protein AND_17232 [Anopheles darlingi]
Length = 1091
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP---------VGKGCGFV 105
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 149 GSFDNGDPNTTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEEKMRGRNCGFV 208
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
+ +R +AE AL LNG + ++L WG++
Sbjct: 209 AYMSRRDAERALRALNGRDVMGYEMKLGWGKS 240
>gi|4096748|gb|AAC99998.1| ORF; Method: conceptual translation supplied by author [Homo
sapiens]
Length = 367
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 175 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 234
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 235 FNKLIVNGRRLNVKWGRSQAAR 256
>gi|221486024|gb|EEE24294.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 865
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 102
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 276 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 335
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
GFV F +R AE A H L+G +R+ WG++
Sbjct: 336 GFVSFESRPQAEAAKHNLDGVSFYGMVIRIGWGKS 370
>gi|344250874|gb|EGW06978.1| Pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 241
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 93 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 152
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 153 FNKLIVNGRRLNVKWGRSQAAR 174
>gi|242094866|ref|XP_002437923.1| hypothetical protein SORBIDRAFT_10g004840 [Sorghum bicolor]
gi|241916146|gb|EER89290.1| hypothetical protein SORBIDRAFT_10g004840 [Sorghum bicolor]
Length = 491
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|312080690|ref|XP_003142708.1| hypothetical protein LOAG_07126 [Loa loa]
Length = 366
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
++NT+++VGG+ P TDE+L QPFS + V++ +G FV++ ++ A A+ ++
Sbjct: 233 ATNTSVYVGGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAIMFMH 292
Query: 122 GTVIGKQSVRLSWGRNPANKQASLSPFTSS 151
G I Q ++ SW R + ++S T+S
Sbjct: 293 GKEINGQKIKCSWSRTVTENKINISNQTAS 322
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 56 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFV 105
P+S+ NT +FVG L V L+ F +GEI+ K+ K GFV
Sbjct: 118 PRSQSPKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFV 177
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG 135
FA +ENAE+A+ K+NG +IG++ +R +W
Sbjct: 178 SFAVKENAEKAIEKMNGQMIGRRPIRTNWA 207
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
++ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A
Sbjct: 192 NQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHA 251
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ + + + V+ WG+
Sbjct: 252 IEHTHNSEVHGNLVKCFWGK 271
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|449267139|gb|EMC78105.1| Pre-mRNA-splicing factor RBM22 [Columba livia]
Length = 420
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|126290582|ref|XP_001369324.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Monodelphis domestica]
Length = 420
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|291243067|ref|XP_002741428.1| PREDICTED: RNA binding motif protein 22-like [Saccoglossus
kowalevskii]
Length = 429
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL ++++DLR F Q+GEI S+ + + C FVQF R+++E A +
Sbjct: 228 DRTITTLYVGGLGDKISEKDLRDHFYQFGEIRSINVVARQQCAFVQFTTRQSSELAAERS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIMNGRRLNIKWGRSQAQQ 309
>gi|334311193|ref|XP_003339587.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Monodelphis
domestica]
Length = 422
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISEADLRNHFYQFGEIRTITVVQRQHCAFIQFATRQAAEMAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLILNGRRLNVKWGRSQAAR 309
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
+NTT+F GGL ++T+E L + F +G+I +KI KG F+++ ++E+A +A+ +L+
Sbjct: 195 TNTTVFCGGLKQDITEEMLHKSFQPHGQIEKIKIFKEKGYAFIKYTSKESACQAIVELHN 254
Query: 123 TVIGKQSVRLSWGRNPANKQAS 144
+ + Q +R SWG++ Q S
Sbjct: 255 SNLNGQMIRCSWGKDTGVDQTS 276
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 16/123 (13%)
Query: 49 NGAPGQGPQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------V 98
+ A GQG +++ +T+ ++VG L P + ++ LR+ F +GEI+ K+
Sbjct: 69 DWATGQGNKNKYTKVDTSRHHHVYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFK 128
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+G GFV F + +AE ++ +NG +G++ ++ W R PAN +P + + KK+
Sbjct: 129 SRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPAN-----TPNETKPEQKKL 183
Query: 158 EYN 160
Y+
Sbjct: 184 NYD 186
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 68 FVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNGTV 124
+VG LD +VT++ + F Q GE+ S K+ P FV+F + A A+ +N +
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTTDPYCFVEFCDHMTALNAITMMNDKM 60
Query: 125 IGKQSVRLSWGRNPANK 141
+ + +R+ W NK
Sbjct: 61 LQNRKMRVDWATGQGNK 77
>gi|223974935|gb|ACN31655.1| unknown [Zea mays]
gi|413952998|gb|AFW85647.1| hypothetical protein ZEAMMB73_699245 [Zea mays]
Length = 441
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|395504854|ref|XP_003756761.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Sarcophilus harrisii]
Length = 420
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|413952999|gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]
Length = 493
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|384487960|gb|EIE80140.1| hypothetical protein RO3G_04845 [Rhizopus delemar RA 99-880]
Length = 292
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 109
+GDS +T ++VG + P VT+ L F ++G IASVKI G+ GFV F N
Sbjct: 194 DGDSHSTNLYVGNIHPTVTEMGLCHEFGKFGPIASVKIMWPRTLEEKEKGRNNGFVCFMN 253
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
RE+A EA+ LNG + +R+ WG+ A
Sbjct: 254 REDAAEAIKGLNGIELEGFKLRVGWGKAVA 283
>gi|339247155|ref|XP_003375211.1| Pre-mRNA-splicing factor RBM22 [Trichinella spiralis]
gi|316971466|gb|EFV55227.1| Pre-mRNA-splicing factor RBM22 [Trichinella spiralis]
Length = 331
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 61 DSSNTTIFVG--GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
D + TTI++G G D +T++D++ F Q+GEI S+ I KGCGFVQF RE AE A
Sbjct: 230 DKTITTIYLGNIGDDNVITEDDIKNYFYQFGEIRSIVILSEKGCGFVQFTTREAAELASE 289
Query: 119 KLNGTVIGK-QSVRLSWGRNPANKQ 142
K G ++ K + + + WGR P ++Q
Sbjct: 290 KTFGKLMIKGRRITVRWGR-PQSQQ 313
>gi|118380139|ref|XP_001023234.1| hypothetical protein TTHERM_00494500 [Tetrahymena thermophila]
gi|89305001|gb|EAS02989.1| hypothetical protein TTHERM_00494500 [Tetrahymena thermophila
SB210]
Length = 376
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 60 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D + T++++G + P+ T++D Q F +YG I S+KI K C FV F R+ AEEA+
Sbjct: 241 ADPTITSLYIGNITPDFTEQDFHQIFVKYGPIQSIKIISQKSCAFVNFIARKAAEEAIKD 300
Query: 120 LNG--TVIGKQSVRLSWGRNPANKQ 142
L G V G Q + +SW R N+Q
Sbjct: 301 LYGNFNVKGIQ-LSISWSRAGKNQQ 324
>gi|45360865|ref|NP_989108.1| pre-mRNA-splicing factor RBM22 [Xenopus (Silurana) tropicalis]
gi|82237531|sp|Q6P616.1|RBM22_XENTR RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|38566013|gb|AAH62518.1| RNA binding motif protein 22 [Xenopus (Silurana) tropicalis]
gi|89267971|emb|CAJ81393.1| RNA binding motif protein 5 [Xenopus (Silurana) tropicalis]
Length = 417
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+E N T+++G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+
Sbjct: 225 NETSIQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAI 284
Query: 118 HKLNGTVIGKQSVRLSWGR 136
NG +I ++R SWGR
Sbjct: 285 LMCNGKIINGSTLRCSWGR 303
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+ +
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMM 190
Query: 121 NGTVIGKQSVRLSW 134
NG + ++++++W
Sbjct: 191 NGEKLEGRNIKVNW 204
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEE 115
++++ ++ V G+ +V + L + FS G + S KI K G GFV+F + A
Sbjct: 39 NANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGTHAGYGFVEFVDSTTARF 98
Query: 116 ALHKLNGTVIGKQSVRLSW 134
A ++G V+ + ++++W
Sbjct: 99 AKDNMDGRVVYGRELKVNW 117
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 58 SEGDSSNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
S+ +NTT++ GG P+V +DE + + F Q+G I V++ KG F++F +E A A
Sbjct: 217 SQSSPTNTTVYCGGFQPHVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVAKEAAARA 276
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ + T + V+ WG+
Sbjct: 277 IEHTHNTEVHGNHVKCFWGK 296
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD V++E L F + G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPAN 140
+N V + ++++W +P N
Sbjct: 63 TAMNKRVFLDKEIKVNWATSPGN 85
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + SS+ +FVG L P +T +D++ F+ +G+I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R PA K S + T F ++
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTSETTNTKQLSFDEV 194
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E A A+ +NG
Sbjct: 201 SNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNG 260
Query: 123 TVIGKQSVRLSWGRNPAN 140
T I V+ WG+ +
Sbjct: 261 TSIEGYVVKCYWGKETTD 278
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 115
D T++VG L +VT+ + + F Q G S K+ V C FV+F +A
Sbjct: 3 DDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHATA 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
+ +NG I + V+++W P +++ S
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPTSQKKDTS 92
>gi|358254799|dbj|GAA56358.1| nucleolysin TIA-1 isoform p40 [Clonorchis sinensis]
Length = 508
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+SNTTI+VGG+ +T+ L+ F ++GEI ++I KG F++F + A A+ ++
Sbjct: 138 ASNTTIYVGGITSGLTELLLQNAFQEFGEIKEIRIFKEKGFSFIRFDSHAAATRAIVTMH 197
Query: 122 GTVIGKQSVRLSWGRNPA-----NKQASLSPFTS 150
G ++G QS + SWG+ P N A+ P++S
Sbjct: 198 GRLVGDQSCKCSWGKEPTYSSRMNNLATNPPWSS 231
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFV 105
P Q + + IFVG L P++ + L F+ +G + KI KG GFV
Sbjct: 23 PSSANQELSNDDSFHIFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFV 82
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
+ +RE AE A+ +NG ++G +++R +W R+PA++ P
Sbjct: 83 AYKSREEAERAIQVMNGQILGSRAIRTNWAVRRDPADQAKDHRPL 127
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQAS 144
V F + AE A+ +NG IG +S+R +W + P ++AS
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREAS 182
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 215 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAI 274
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 275 EHTHNSEVHGNLVKCFWGK 293
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|302815924|ref|XP_002989642.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
gi|300142613|gb|EFJ09312.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
Length = 473
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A L
Sbjct: 146 DATVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 205
Query: 121 NGTVIGKQSVRLSW 134
+ + S L W
Sbjct: 206 SFKHQSRTSKLLKW 219
>gi|226509868|ref|NP_001151426.1| LOC100285059 [Zea mays]
gi|195646758|gb|ACG42847.1| pre-mRNA-splicing factor SLT11 [Zea mays]
Length = 490
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DE + + F Q+G I V++ KG F++F ++E A A+
Sbjct: 217 QSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVSKEAAARAI 276
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 277 EHTHNSEVHGNHVKCFWGK 295
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L F + G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPAN 140
+N V + ++++W +P N
Sbjct: 63 TAMNKRVFLDKEIKVNWATSPGN 85
>gi|440803975|gb|ELR24858.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV--------- 98
S P G GD T ++VG + P +E LR+ F +YG I SVKI
Sbjct: 163 SESLPPLGSHDSGDPYTTNLYVGNVSPQANEELLRKEFGKYGNIYSVKIMWPRTDDEKRR 222
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ GFVQF RE+AE A LNG + +R+ WG+
Sbjct: 223 NRNSGFVQFEKREDAERAKDALNGVELMGYELRIGWGK 260
>gi|242066226|ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
gi|241934233|gb|EES07378.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
Length = 491
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDNRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANK 141
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|393907830|gb|EFO21360.2| hypothetical protein LOAG_07126 [Loa loa]
Length = 317
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
++NT+++VGG+ P TDE+L QPFS + V++ +G FV++ ++ A A+ ++
Sbjct: 233 ATNTSVYVGGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAIMFMH 292
Query: 122 GTVIGKQSVRLSWGR 136
G I Q ++ SW R
Sbjct: 293 GKEINGQKIKCSWSR 307
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 56 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFV 105
P+S+ NT +FVG L V L+ F +GEI+ K+ K GFV
Sbjct: 118 PRSQSPKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFV 177
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG 135
FA +ENAE+A+ K+NG +IG++ +R +W
Sbjct: 178 SFAVKENAEKAIEKMNGQMIGRRPIRTNWA 207
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
++ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A
Sbjct: 215 NQSSPTNTTVYCGGFPPNVISDDLMHKHFMQFGPIQDVRVFKEKGFAFIKFVTKEAAARA 274
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ + + + V+ WG+
Sbjct: 275 IEHTHISEVHGSQVKCFWGK 294
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L F + G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N V ++ ++++W +P N+
Sbjct: 63 TAMNKRVFLEKEIKVNWATSPGNQ 86
>gi|449664731|ref|XP_002156267.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Hydra
magnipapillata]
Length = 361
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEA 116
++ TIFVG LD ++TD +LRQ F +GEI + K+ K GF+ F N+ +AE A
Sbjct: 69 ASITIFVGDLDDDLTDSELRQAFEPFGEILNAKVVRDAATEKSKNYGFISFTNKPDAERA 128
Query: 117 LHKLNGTVIGKQSVRLSWG-RNPANKQASLS 146
+ ++G ++ ++ ++ +W RN +K + L
Sbjct: 129 IRDMHGAMLKRRPIKTNWATRNQNSKPSQLD 159
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA-SVKIPVGKGCGFVQFANRENAEEAL 117
E SN T++V L ++DE L + F G+I + ++ GK F++F + A A+
Sbjct: 166 EVSESNCTVYVTNLPDRISDEVLVKHFEDCGKIVGTPRVFDGKNFAFIRFESHAAATTAI 225
Query: 118 HKLNGTVIGKQSVRLSWGRNPANKQA 143
K NG+ + ++ WG++ + QA
Sbjct: 226 VKGNGSELNGAILKCWWGKDSESHQA 251
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
++ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +++A A
Sbjct: 214 NQSSPTNTTVYCGGFPPNVISDDLMHKHFGQFGPIQDVRVFKDKGFAFIKFVTKDSAAHA 273
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ + T + V+ WG+
Sbjct: 274 IEHTHNTEVHGNLVKCFWGK 293
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V++E L F G + + KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 215 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAI 274
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 275 EHTHNSEVHGNLVKCFWGK 293
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 215 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAI 274
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 275 EHTHNSEVHGNLVKCFWGK 293
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|358340385|dbj|GAA34086.2| pre-mRNA-splicing factor RBM22/SLT11 [Clonorchis sinensis]
Length = 534
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT+++G + VT+ DLR F Q+GEI SV + + C F+QF R++AE+A +
Sbjct: 244 DRTITTLYIGSIPDEVTERDLRNHFYQFGEIRSVNLHPRQHCAFIQFTTRQSAEKAAERS 303
Query: 120 LNGTVIGKQSVRLSWGRNP 138
++G + ++WG++P
Sbjct: 304 YERLILGGHRLTVNWGKSP 322
>gi|357629028|gb|EHJ78065.1| putative RNA binding motif protein 22 [Danaus plexippus]
Length = 405
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT+++G L N+T+E+LR F QYGEI S+ + C FVQ+ R AE A K
Sbjct: 228 DRTVTTLYIGNLPENITEEELRGHFYQYGEIRSLTLVPRAQCAFVQYTTRSAAEHAAEKT 287
Query: 120 LNGTVIGKQSVRLSWGRN 137
N VI + + + WG++
Sbjct: 288 FNRLVIAGRRLAIKWGKS 305
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 215 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAI 274
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 275 EHTHNSEVHGNLVKCFWGK 293
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L F G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + + ++++W +P N+
Sbjct: 63 TAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|440800608|gb|ELR21644.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 417
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-GKGCGFVQFANRENAEEALHKLNG 122
NT +F+G LDP++T LR+ F Q+G I + V + GFV+F +R++AE A ++N
Sbjct: 141 NTNLFIGDLDPSITSAQLREVFRQFGPIYEEETFVKNRNYGFVRFRHRKHAEMAKREMNN 200
Query: 123 TVIGKQSVRLSWG 135
V+G +++R+ WG
Sbjct: 201 KVLGARAIRIGWG 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 45 GYASNGAPGQGPQS-EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--- 100
G S+G+ P++ E + +F+G L + ++ LR+ F +G I SV+I +
Sbjct: 42 GDLSSGSLDSLPEAGEFEDDERCLFIGDLARGLNEDQLREAFDPFGVI-SVEIKRDRVTN 100
Query: 101 ---GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK-QASLSPFTSSTQFKK 156
G GFV +RE+A A ++ V+G +++R+ W + N L P +S Q ++
Sbjct: 101 YSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIGDLDPSITSAQLRE 160
Query: 157 I 157
+
Sbjct: 161 V 161
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 215 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAI 274
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 275 EHTHNSEVHGNLVKCFWGK 293
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L F G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + + ++++W +P N+
Sbjct: 63 TAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 215 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAI 274
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 275 EHTHNSEVHGNLVKCFWGK 293
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+ + SS+ IFVG L P + LR+ F+ +GEI++ +I KG F
Sbjct: 85 SPGNQPKQD-TSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAF 143
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+H +NG +G +S+R +W
Sbjct: 144 VSFVKKAEAESAIHAMNGQWLGNRSIRTNW 173
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 122
T++VG LD +VT++ L FSQ G + KI P FV+F N + A AL +N
Sbjct: 11 TLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNNDPYAFVEFVNHQAASTALIAMNK 70
Query: 123 TVIGKQSVRLSWGRNPANK 141
+ ++ ++++W +P N+
Sbjct: 71 RHVLEKEIKVNWATSPGNQ 89
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 43/79 (54%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ +N T++ GG + ++ + + FS++G I ++ KG F++F+ +E A A+
Sbjct: 201 NQSSPTNCTVYCGGFTNGINEDLIEKAFSRFGTIQDIRSFKDKGYAFIRFSTKEAATHAI 260
Query: 118 HKLNGTVIGKQSVRLSWGR 136
++ I Q V+ WG+
Sbjct: 261 EAMHNAEINGQQVKCFWGK 279
>gi|290561328|gb|ADD38066.1| Pre-mRNA-splicing factor RBM22 [Lepeophtheirus salmonis]
Length = 362
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
++ D TT++VGGLD + ++D+ F QYGEI ++ + +GC FVQF+ R +AE A
Sbjct: 212 ETPEDPLITTLYVGGLDDVLDEKDISSHFYQYGEIRNITLVPKQGCAFVQFSKRSSAELA 271
Query: 117 LHK-LNGTVIGKQSVRLSWGRN 137
K N VI + + + WG++
Sbjct: 272 AEKTFNNLVIHGRKIIVRWGKS 293
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+ + S + IFVG L P + LR F+ +GEI+ ++ KG GF
Sbjct: 73 SPGNAPKQD-TSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGF 131
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPFTSSTQF 154
V F + +AE A+ +NG +G +++R +W + PA K A P + F
Sbjct: 132 VSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVF 183
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 51/80 (63%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ S+N T++ G L T+E L++ F YG+I +++ KG F++FA++E+A +A+
Sbjct: 185 QSSSTNCTVYCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFIRFASKESATQAIV 244
Query: 119 KLNGTVIGKQSVRLSWGRNP 138
++ T + Q+V+ SWG+ P
Sbjct: 245 SVHNTDLNGQNVKCSWGKEP 264
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 68 FVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNGTV 124
+VG LDP+VT+E + F Q G + KI P + FV+FA +A AL +N
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPGHEPYCFVEFAEHHSAAAALAAMNKRN 60
Query: 125 IGKQSVRLSWGRNPAN 140
+ ++++W +P N
Sbjct: 61 CMGREMKVNWATSPGN 76
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 51 APGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCG 103
AP ++ D+SN IFVG + P + + LR+ FS +G + KI KG G
Sbjct: 98 APINNISTQEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYG 157
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135
FV +A +E AEEAL+K+NG +G + +R +W
Sbjct: 158 FVAYATKEEAEEALNKMNGKFLGTRQIRTNWA 189
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN TI+VGG+ + +E LR+ F ++G+I V+I KG FV+F + E A +A+ +++G
Sbjct: 216 SNCTIYVGGITNGLCEELLRESFKEFGDILEVRIFKEKGYAFVRFDSHEGATQAIIRMHG 275
Query: 123 TVIGKQSVRLSWGR 136
+G Q + SWG+
Sbjct: 276 KEVGSQLCKCSWGK 289
>gi|222635819|gb|EEE65951.1| hypothetical protein OsJ_21832 [Oryza sativa Japonica Group]
Length = 710
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 119
+++ LD ++ DE LR+ F +GE+AS K+ + KGCGFV FA E+A A+ K
Sbjct: 367 VNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILK 426
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASLS 146
+NG ++GK+ + ++ + ++A L+
Sbjct: 427 MNGKMVGKKPLYVAVAQRKEERKAFLA 453
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 119
+F+ L+PN+ ++ L + FS +G I S K+ KG GF+QF + +A++A++
Sbjct: 173 ANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAING 232
Query: 120 LNGTVIGKQSV 130
LNG + Q +
Sbjct: 233 LNGMLANGQKI 243
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 54 QGPQSEGDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF 107
Q + GD++N T ++V L + +D DL FS +G I S + + + GFV F
Sbjct: 252 QEREHTGDANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNF 311
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
E A A+ LNG IG + ++ + + +QA L
Sbjct: 312 EKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAEL 349
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASV----KIPVGK---GCGFVQFANRENAEEALH 118
+++VG L+ +V ++ L FSQ +AS I G+ G G+V F +RE+A A+
Sbjct: 85 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 144
Query: 119 KLNGTVIGKQSVRLSWG-RNPANKQASLS 146
LN TV+ + +R+ + R+P +++ L+
Sbjct: 145 NLNFTVVNGKPIRVMFSNRDPTLRKSGLA 173
>gi|339242463|ref|XP_003377157.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316974060|gb|EFV57598.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 352
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 58 SEGDSSNTTIFVGGLDPNVT--DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
++ NTT++VG + N T +DLR+ F+++G I V++ +G FV+F N+E+A
Sbjct: 193 AQSSPQNTTVYVGSVAANTTGTHDDLRRIFARFGSILEVRVFKQQGYAFVRFDNKESAAH 252
Query: 116 ALHKLNGTVIGKQSVRLSWGR 136
A+ + GT I SVR SWG+
Sbjct: 253 AILNITGTEINGSSVRCSWGK 273
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
KG GFV + + ++AE A+ ++NG +G++++R +W R P
Sbjct: 137 KGYGFVSYVSHDDAERAIEQMNGQWLGRRTIRTNWATRKP 176
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP- 97
+VL N A G Q + D+SN IFVG L P + LR F+ +GEI++ +I
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVR 129
Query: 98 -----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSP 147
KG FV F + +AE A+ +NG +G +S+R +W R P +K +P
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAP 185
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+NTT++ GG NV EDL Q FSQ+G+I V++ KG F++F +E A A+ +
Sbjct: 205 TNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATH 264
Query: 122 GTVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 265 NTEISGHIVKCFWGK 279
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 60 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 115
GD S+ T++VG LD +VT+ + F Q GE+ KI P F++F + A
Sbjct: 2 GDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAAT 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
AL +N V+ + ++++W +P N+
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|428173494|gb|EKX42396.1| hypothetical protein GUITHDRAFT_74010 [Guillardia theta CCMP2712]
Length = 629
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGF 104
QG +GD + T ++VG L P +++E L + F +YG IASVKI + CGF
Sbjct: 159 QGSFDDGDENTTNLYVGNLHPQISEEMLMKEFGKYGPIASVKIMWPRTDEEKSRQRNCGF 218
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
V +R++AE A LNG +++ WG+
Sbjct: 219 VNMMDRKSAEAAKDSLNGKEFFGLEMKIGWGK 250
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ ++D +RQ FS +G+I +++ KG F++F++ E+A A+ +NGT
Sbjct: 203 NCTVYCGGIQSGLSDHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGT 262
Query: 124 VIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
I V+ WG+ + ++ P T +
Sbjct: 263 TIEGHIVKCYWGKESPDMAKTVQPVTEQVDY 293
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T +D+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGY 139
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
GFV F N+ +AE A+ + G +G + +R +W + PA K
Sbjct: 140 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK 180
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E +S T++VG L +VT+ + Q F+Q G S K+ FV+F +A
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 61
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 93
>gi|410971262|ref|XP_003992089.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Felis
catus]
Length = 1015
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------- 96
G + APG GD S T +++G ++P + +E L Q F ++G +ASVKI
Sbjct: 256 GVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEE 313
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNG-TVIGKQSVRLSWGR 136
+ CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 314 RARERNCGFVAFMNRRDAERALKNLNGKKMIMSFEMKLGWGK 355
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAITAMNGQWIGSRSIRTNW 170
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAI 275
Query: 118 -HKLNGTVIGKQSVRLSWGR 136
H N V G Q V+ WG+
Sbjct: 276 EHTHNSEVHGNQ-VKCFWGK 294
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L FS G + S KI P F++++ + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGNDPYAFIEYSTYQAATTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + + ++++W +P N+
Sbjct: 63 TAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|328865488|gb|EGG13874.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 389
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 44 GGYASNGA---PGQGPQSEGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVG 99
GG A NG P+ D S +T+F+ +DP+ VT+ DLR F +G I S+K+
Sbjct: 201 GGGALNGDGTRTKTAPRPPADRSISTLFLANVDPDQVTESDLRSSFLSFGNIRSIKLLHD 260
Query: 100 KGCGFVQFANRENAEEALHKLNGTV-IGKQSVRLSW 134
K C FV F R+ AE A+ +L G + G S++++W
Sbjct: 261 KKCAFVVFEKRDAAESAVQQLFGNLQFGDCSIKINW 296
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG IG +++R +W
Sbjct: 141 VSFVKKAEAENAIQSMNGQWIGSRNIRTNW 170
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DE + + F Q+G I V++ KG F++F +E A A+
Sbjct: 218 QSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVTKEAAARAI 277
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 278 EHTHNSEVHGNHVKCFWGK 296
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L F + G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPAN 140
+N V + ++++W +P N
Sbjct: 63 TAMNKRVFLDKEIKVNWATSPGN 85
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP- 97
+VL N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 129
Query: 98 -----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 141
KG FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 122 GTVIGKQSVRLSWG 135
T I +V+ WG
Sbjct: 266 NTEISGHTVKCFWG 279
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 60 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 115
GD S+ T++VG LDP+VT+ L F G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGNDPYAFLEFTCHTAAAT 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
AL +N V+ + ++++W +P N+
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHK 119
T+F+G L N +++ + FS+YGEI SV+IP KG G+VQF+N E+A++AL
Sbjct: 271 TLFLGNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEG 330
Query: 120 LNGTVIGKQSVRLSWGR-NPANKQ 142
L G I ++VRL + PAN +
Sbjct: 331 LQGEYIDNRAVRLDYSTPRPANPE 354
>gi|115468728|ref|NP_001057963.1| Os06g0589700 [Oryza sativa Japonica Group]
gi|113596003|dbj|BAF19877.1| Os06g0589700 [Oryza sativa Japonica Group]
Length = 399
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 119
+++ LD ++ DE LR+ F +GE+AS K+ + KGCGFV FA E+A A+ K
Sbjct: 72 VNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILK 131
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASLS 146
+NG ++GK+ + ++ + ++A L+
Sbjct: 132 MNGKMVGKKPLYVAVAQRKEERKAFLA 158
>gi|125555900|gb|EAZ01506.1| hypothetical protein OsI_23538 [Oryza sativa Indica Group]
Length = 669
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 119
+++ LD ++ DE LR+ F +GE+AS K+ + KGCGFV FA E+A A+ K
Sbjct: 344 VNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILK 403
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASLS 146
+NG ++GK+ + ++ + ++A L+
Sbjct: 404 MNGKMVGKKPLYVAVAQRKEERKAFLA 430
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 119
+F+ L+PN+ ++ L + FS +G I S K+ KG GF+QF + +A++A++
Sbjct: 150 ANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAING 209
Query: 120 LNGTVIGKQSV 130
LNG + Q +
Sbjct: 210 LNGMLANGQKI 220
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 60 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENA 113
GD++N T ++V L + +D DL FS +G I S + + + GFV F E A
Sbjct: 235 GDANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECA 294
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
A+ LNG IG + ++ + + +QA L
Sbjct: 295 RNAVKNLNGKSIGDMVLYVARAQKKSERQAEL 326
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALH 118
+++VG L+ +V ++ L FSQ +AS + G G+V F +RE+A A+
Sbjct: 62 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGSKSLGYGYVNFMSREDATRAME 121
Query: 119 KLNGTVIGKQSVRLSWG-RNPANKQASLS 146
LN TV+ + +R+ + R+P +++ L+
Sbjct: 122 NLNFTVVNGKPIRVMFSNRDPTLRKSGLA 150
>gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
Length = 670
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 119
+++ LD ++ DE LR+ F +GE+AS K+ + KGCGFV FA E+A A+ K
Sbjct: 343 VNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILK 402
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASLS 146
+NG ++GK+ + ++ + ++A L+
Sbjct: 403 MNGKMVGKKPLYVAVAQRKEERKAFLA 429
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 119
+F+ L+PN+ ++ L + FS +G I S K+ KG GF+QF + +A++A++
Sbjct: 149 ANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAING 208
Query: 120 LNGTVIGKQSV 130
LNG + Q +
Sbjct: 209 LNGMLANGQKI 219
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASV----KIPVGK---GCGFVQFANRENAEEALH 118
+++VG L+ +V ++ L FSQ +AS I G+ G G+V F +RE+A A+
Sbjct: 61 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 120
Query: 119 KLNGTVIGKQSVRLSWG-RNPANKQASLS 146
LN TV+ + +R+ + R+P +++ L+
Sbjct: 121 NLNFTVVNGKPIRVMFSNRDPTLRKSGLA 149
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 60 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENA 113
GD++N T ++V L + +D DL FS +G I S + + + GFV F E A
Sbjct: 234 GDANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECA 293
Query: 114 EEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
A+ LNG IG + ++ + + +QA L
Sbjct: 294 RNAVKNLNGKSIGDMVLYVARAQKKSERQAEL 325
>gi|167525647|ref|XP_001747158.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774453|gb|EDQ88082.1| predicted protein [Monosiga brevicollis MX1]
Length = 409
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 57 QSEGDSSNTTIFVGGLDP--NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
++ D+S TT+++GG+ P N+T +DLR F ++ ++A+V++ + FV+FA RE AE
Sbjct: 242 EAPADTSITTLYIGGVRPDLNITADDLRDYFEKHSQVAAVRLAPKQSAAFVEFATREGAE 301
Query: 115 EALH-KLNGTVIGKQSVRLSWGRNPAN 140
+A+ +I + +R+ WG+ +N
Sbjct: 302 QAMEIAAVNCIIKGEPLRVMWGKARSN 328
>gi|213403836|ref|XP_002172690.1| U1 snRNP-associated protein Usp109 [Schizosaccharomyces japonicus
yFS275]
gi|212000737|gb|EEB06397.1| U1 snRNP-associated protein Usp109 [Schizosaccharomyces japonicus
yFS275]
Length = 350
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NTT+FV GL V +EDLR F GEI V++ GK V FA R AE + ++
Sbjct: 172 DPNNTTVFVDGLADTVKEEDLRSYFQHLGEIVHVQLLNGKAN--VIFAQRYPAERCILEM 229
Query: 121 NGTVIGKQSVRLSWGRNP 138
+G +I ++L WGR P
Sbjct: 230 HGALIKNSRIQLQWGRPP 247
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T +D+R F+ +G I+ ++ KG
Sbjct: 80 NWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGY 139
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ ++ G +G + +R +W R P +A+ T F ++
Sbjct: 140 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEV 195
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I V++ KG FV+F + E+A A+ +NG
Sbjct: 202 SNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNG 261
Query: 123 TVIGKQSVRLSWGR 136
T + V+ WG+
Sbjct: 262 TSLEGHIVKCYWGK 275
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q F Q G S K+ V FV+F +A +
Sbjct: 4 DEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHAAAS 63
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W +P++++ S
Sbjct: 64 LAAMNGRKIMGKEVKVNWATSPSSQKKDTS 93
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 18/115 (15%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 77 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQF 128
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
G GFV+F + AE A+ LNG I + +R++W N ANK+ + + F
Sbjct: 129 NSKGANYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHF 183
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 45 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PV 98
Y SN A E S++ IFVG L V DE L Q FS +G ++ ++
Sbjct: 168 AYQSNTA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGR 222
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
+G GFV F R +AE+AL ++G +G +++R +W S
Sbjct: 223 SRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPSIS 268
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T D+ F +G + ++ +G F++ ENA A+ +LNG
Sbjct: 309 TTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYN 368
Query: 125 IGKQSVRLSWG--RNPANK------QASLSPFTSS 151
+ + ++ SWG R P + Q + SPF SS
Sbjct: 369 VNGRPLKCSWGKDRPPTGQFDNFPGQQANSPFASS 403
>gi|395644710|ref|ZP_10432570.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395441450|gb|EJG06207.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
++T++VG L+ T+E L + FS YG++ S +I KG GFV+FA+ E AE+A++ LN T
Sbjct: 3 SSTLYVGNLNYETTEEQLSELFSAYGDVKSARIIPRKGFGFVEFASVEEAEKAMNALNET 62
Query: 124 VIGKQSVRLSWGRNP 138
+++R+ R P
Sbjct: 63 QCMGRTLRIDEARAP 77
>gi|224106319|ref|XP_002314127.1| predicted protein [Populus trichocarpa]
gi|222850535|gb|EEE88082.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD + ++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANKQASLS 146
N VI ++L WGR A K S S
Sbjct: 284 SNRLVIKGLRLKLMWGRPQAPKPESES 310
>gi|159478857|ref|XP_001697517.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274396|gb|EDP00179.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1010
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGK 100
GA G G GD T ++VG L +E L++ F ++G IASVK+ G+
Sbjct: 202 GAMG-GSFDHGDPFTTNLYVGNLSQETDEEVLKREFGRFGAIASVKVMWPRDEEQRRKGR 260
Query: 101 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
CGFV F R++AE A+ KL G ++ + + WG+
Sbjct: 261 NCGFVGFMKRDDAEMAMRKLQGIILHGNELHIGWGK 296
>gi|224106323|ref|XP_002314129.1| predicted protein [Populus trichocarpa]
gi|222850537|gb|EEE88084.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D S T++VGGLD + ++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAEL 283
Query: 121 -NGTVIGKQSVRLSWGRNPANKQASLS 146
N VI ++L WGR A K S S
Sbjct: 284 SNRLVIKGLRLKLMWGRPQAPKPESES 310
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+SN +FVG L P V DE L++ FS +G ++ ++ +G GF+
Sbjct: 96 QGNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLA 155
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSW 134
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 156 FRDKTDAEQAIATMNGEWLGSRAIRVNW 183
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ + N+T++VG L P T DL F G + +++ +G FV+ E+A A+
Sbjct: 229 SQTPAYNSTVYVGNLVPYCTQADLIPLFQSIGYLQEIRMQADRGFAFVKLDTHEHAAMAI 288
Query: 118 HKLNGTVIGKQSVRLSWGRNPAN 140
+L G ++ + ++ SWG++ A+
Sbjct: 289 IQLQGQMVHGRPIKCSWGKDRAD 311
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFV 105
G G +E ++VG L P VT+ L + F+ G + VKI G GFV
Sbjct: 5 GIGGVAEAPQRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFV 64
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSW 134
++ + AE AL LNG I +R++W
Sbjct: 65 EYIDMRAAETALQTLNGRKIFDTEIRVNW 93
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + SS+ +FVG L P +T +D++ F+ +G+I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R PA K + S + F ++
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEV 194
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E A A+ +NG
Sbjct: 201 SNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNG 260
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 261 TSIEGYVVKCYWGK 274
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 115
D T++VG L +VT+ + + F Q G S K+ V C FV+F +A
Sbjct: 3 DEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHATA 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
+ +NG I + V+++W P +++ S
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPTSQKKDTS 92
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ SN T++ GG+ +T++ +RQ FS +G+I V++ KG FV+F + E+A A+
Sbjct: 196 SQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVRFNSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGRNPANKQASL 145
+NGT I V+ WG+ + S+
Sbjct: 256 VSVNGTSIDGHVVKCYWGKETPDMMNSM 283
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ + G +G + +R +W R P + + + F+++
Sbjct: 147 WDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKHLSFEEV 194
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q F+Q G S K+ V FV+F + +A +
Sbjct: 3 DDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAAS 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P +++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPTSQKKDTS 92
>gi|158293785|ref|XP_315111.4| AGAP005006-PA [Anopheles gambiae str. PEST]
gi|157016612|gb|EAA10382.4| AGAP005006-PA [Anopheles gambiae str. PEST]
Length = 1102
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G GD + T +++G L+P ++++ L + F +YG +AS+KI + CGFV
Sbjct: 157 GSFDNGDPNTTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEEKMRNRNCGFV 216
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
+ +R +AE AL LNG + ++L WG++
Sbjct: 217 AYMSRRDAERALRALNGRDVMGYEMKLGWGKS 248
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQASLS 146
T I V+ WG+ NP + + +S
Sbjct: 272 TTIEGHVVKCYWGKETPDMLNPVQQASQIS 301
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
G +G + +R +W R P +++ T ++++
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEV 205
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLN 121
T++VG L +VT+ + Q FSQ G S K+ + FV+F +A +L +N
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMN 67
Query: 122 GTVIGKQSVRLSWGRNPANKQ 142
G I + V+++W P++++
Sbjct: 68 GRKIMGKEVKVNWATTPSSQK 88
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ ++D+ +RQ FS +G+I +++ KG FV+F + E A A+ +NG
Sbjct: 204 SNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNG 263
Query: 123 TVIGKQSVRLSWGRNPANKQA 143
T I +V+ WG+ A+ ++
Sbjct: 264 TCIEGHTVKCYWGKETADMRS 284
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P ++ +D+R F+ +G+I+ ++ KG
Sbjct: 81 NWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGY 140
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 139
GF+ F N+ +AE A+ ++NG +G + +R +W R P+
Sbjct: 141 GFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPS 178
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLN 121
T++VG L +VT+ + Q FSQ G S K+ + FV+F +A AL +N
Sbjct: 10 TLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAAAALAAMN 69
Query: 122 GTVIGKQSVRLSWGRNPANKQASLS 146
G I + ++++W P++++ S
Sbjct: 70 GRKILGKDMKVNWASTPSSQKKDTS 94
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT+++G L P T DL F +G I V++ +G FV+ + ENA A+ +L GT
Sbjct: 220 NTTVYIGNLTPYTTQADLVPIFQAFGYIIEVRMQADRGFAFVKLDSHENASMAIVQLQGT 279
Query: 124 VIGKQSVRLSWGRN 137
+I + ++ SWGR+
Sbjct: 280 LIQGRPIKCSWGRD 293
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 54 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG + D++N +FVG L P V DE L + FS + I+ ++ +G GF+
Sbjct: 94 QGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLS 153
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWG 135
F + +AE+A+ +NG +G +++R++W
Sbjct: 154 FREKTDAEQAISTMNGEWLGSRAIRVNWA 182
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + SVKI G GFV++ + AE AL
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQT 76
Query: 120 LNGTVIGKQSVRLSWGRNPANKQ 142
LNG I +R++W NKQ
Sbjct: 77 LNGRKIFDTEIRVNWAYQGNNKQ 99
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ ++D+ +RQ FS +G+I +++ KG FV+F + E A A+ +NG
Sbjct: 204 SNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNG 263
Query: 123 TVIGKQSVRLSWGRNPANKQA 143
T I +V+ WG+ A+ ++
Sbjct: 264 TCIEGHTVKCYWGKETADMRS 284
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGC 102
N A Q + S++ +FVG L P ++ +D+R F+ +G+I+ ++ KG
Sbjct: 81 NWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGY 140
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 139
GF+ F N+ +AE A+ ++NG +G + +R +W R P+
Sbjct: 141 GFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPS 178
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLN 121
T++VG L +VT+ + Q FSQ G S K+ + FV+F +A AL +N
Sbjct: 10 TLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAAAALAAMN 69
Query: 122 GTVIGKQSVRLSWGRNPANKQASLS 146
G I + ++++W P++++ S
Sbjct: 70 GRKILGKDMKVNWASTPSSQKKDTS 94
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 55 GPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF 107
GPQ + D+S + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F
Sbjct: 84 GPQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSF 143
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
+ AE A+ +NG +G +S+R +W R P
Sbjct: 144 LKKAEAESAIAAMNGQWLGSRSIRTNWATRKP 175
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ +N T++ GGL +TDE +++ F+ +G I +++ KG FV+FA +E+A A+
Sbjct: 195 QSSPTNCTVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKESATHAIV 254
Query: 119 KLNGTVIGKQSVRLSWGR 136
++ + I Q V+ SWG+
Sbjct: 255 AVHNSDINGQPVKCSWGK 272
>gi|443697641|gb|ELT98008.1| hypothetical protein CAPTEDRAFT_123077 [Capitella teleta]
Length = 416
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 61 DSSNTTIFVGGL-DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D S T++VG L + +T+ DLR F Q+GE+ +V + + + C F+QF R AEEA+ K
Sbjct: 231 DKSVCTLYVGNLGEDEITETDLRNYFYQFGELRAVSLVIRQQCAFIQFTTRAAAEEAVEK 290
Query: 120 -LNGTVIGKQSVRLSWGRNP 138
N V+ + + + WG++P
Sbjct: 291 TFNKLVMHGRRLNIKWGKSP 310
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 141
FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTK 179
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQP-FSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG NV E+L Q FSQ+G+I V++ KG F++F +E A A+
Sbjct: 202 QSSPTNTTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAI 261
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I +V+ WG+
Sbjct: 262 EATHNTEISGHTVKCFWGK 280
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 60 GDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 115
GD S+ T++VG LD +VT+E L F Q GE+ KI P F++F N +A
Sbjct: 2 GDESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGNDPYAFLEFTNHASAAT 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
AL +N V ++ ++++W +P N+
Sbjct: 62 ALAAMNRRVFLEKEMKVNWATSPGNQ 87
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 78 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFN 129
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
G GFV+F + AE A+ LNG I + +R++W N ANK+ + S F
Sbjct: 130 SKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSANKEDTSSHF 183
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------G 99
Y SN A E SS+ IFVG L V DE L Q FS +G ++ ++
Sbjct: 169 YQSNSA-----NKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRS 223
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
+G GFV F R +AE+AL+ ++G +G +++R +W
Sbjct: 224 RGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNW 258
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T DL F +G + ++ +G F++ ENA A+ +LNG
Sbjct: 309 TTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYN 368
Query: 125 IGKQSVRLSWGRN 137
+ + ++ SWG++
Sbjct: 369 VNGRPLKCSWGKD 381
>gi|391327440|ref|XP_003738208.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Metaseiulus
occidentalis]
Length = 364
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
+ D + TT+++GG+ TD+D+R F Q+GEI ++ I + C F+ F R +A+ A
Sbjct: 224 EPPADKNITTLYLGGVPKETTDQDIRNHFYQFGEIRAINIVEKQSCAFICFMTRASAQLA 283
Query: 117 LHK-LNGTVIGKQSVRLSWGRNPANKQASLSPFTS 150
+ N + + + + WGR+PA + P TS
Sbjct: 284 AERSFNKLFLHGRRINVKWGRSPALVSSRDEPSTS 318
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP- 97
+VL N A G Q + D+SN IFVG L P + LR F+ +GEI++ +I
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVR 129
Query: 98 -----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSP 147
KG FV F + +AE A+ +NG +G +S+R +W R P +K +P
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAP 185
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG NV EDL Q FSQ+G+I V++ KG F++F +E A A+
Sbjct: 201 QSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAI 260
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I V+ WG+
Sbjct: 261 EATHNTEISGHIVKCFWGK 279
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 60 GDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 115
GD S+ T++VG LD +VT+ + F Q GE+ KI P F++F + A
Sbjct: 2 GDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAAT 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
AL +N V+ + ++++W +P N+
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 26 HRNSSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQP 84
H+++S + L L N A G Q + D+SN IFVG L P + E LR+
Sbjct: 56 HQSASTALAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREA 115
Query: 85 FSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
F+ +GEI++ +I KG FV F + AE A+ +NG +G +S+R +W
Sbjct: 116 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNW 171
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
+N T++ GG +T++ +++ FSQ+G I +++ KG F++FA +E+A A+ ++
Sbjct: 203 TNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKDKGYAFIKFATKESATHAIETIHN 262
Query: 123 TVIGKQSVRLSWGR 136
T I Q V+ WG+
Sbjct: 263 TEINGQMVKCFWGK 276
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LDP+V+++ L FSQ G + KI P FV+F N ++A AL
Sbjct: 4 ESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTAL 63
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + + ++++W +P N+
Sbjct: 64 AAMNKRLFLDKEMKVNWATSPGNQ 87
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q+ GD NT+++VG + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A
Sbjct: 275 QTSGD--NTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 331
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ ++N +G Q VR SWG+
Sbjct: 332 IVQMNNQDVGGQLVRCSWGK 351
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 162 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 221
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 222 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 259
>gi|159163531|pdb|1X4G|A Chain A, Solution Structure Of Rrm Domain In Nucleolysin Tiar
Length = 109
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 25 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 84
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 85 TIEGHVVKCYWGK 97
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 207 SQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|148666752|gb|EDK99168.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_b
[Mus musculus]
Length = 293
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+
Sbjct: 114 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAI 173
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQ 142
+NGT I V+ WG+ NP +Q
Sbjct: 174 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQ 204
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
KG GFV F N+ +AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 54 KGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 112
>gi|149067625|gb|EDM17177.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_e [Rattus norvegicus]
Length = 181
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 73 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 132
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 133 TIEGHVVKCYWGK 145
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
KG GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 7 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDV 65
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 172 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 231
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 232 TIEGHVVKCYWGK 244
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 49 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 108
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 109 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 164
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q+ GD NT+++VG + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A
Sbjct: 235 QTSGD--NTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 291
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ ++N +G Q VR SWG+
Sbjct: 292 IVQMNNQDVGGQLVRCSWGK 311
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 182 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 219
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 121
T++VG LD VT++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKV-IFDGSNDPYAFVEFSDHGQASQALQTMN 105
Query: 122 GTVIGKQSVRLSWGRNPANKQASLS 146
++ + ++++W P +Q+ +
Sbjct: 106 KRLLLDREMKVNWAVEPGQQQSKID 130
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q+ GD NT+++VG + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A
Sbjct: 132 QTSGD--NTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 188
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ ++N +G Q VR SWG+
Sbjct: 189 IVQMNNQDVGGQLVRCSWGK 208
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 19 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 78
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 79 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 116
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 207 SQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|307181926|gb|EFN69366.1| Nucleolysin TIA-1 isoform p40 [Camponotus floridanus]
Length = 323
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ +N T++ GGL +T+E +++ FS +G I +++ KG F++F+ +E+A A+
Sbjct: 33 QSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIV 92
Query: 119 KLNGTVIGKQSVRLSWGR---NPANKQASLSPFTSST 152
++ T I Q+V+ SWG+ +P N Q + +S+T
Sbjct: 93 AVHNTDINGQTVKCSWGKESGDPNNAQQTGQALSSAT 129
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q+ GD NT+++VG + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A
Sbjct: 203 QTSGD--NTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 259
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ ++N +G Q VR SWG+
Sbjct: 260 IVQMNNQDVGGQLVRCSWGK 279
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 150 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 187
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+
Sbjct: 179 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAI 238
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 239 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 272
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 70 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 129
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
+AE A+ ++ G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 130 WDAENAIQQMGGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 175
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+
Sbjct: 207 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAI 266
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q+ GD NT+++VG + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A
Sbjct: 122 QTSGD--NTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 178
Query: 117 LHKLNGTVIGKQSVRLSWGR 136
+ ++N +G Q VR SWG+
Sbjct: 179 IVQMNNQDVGGQLVRCSWGK 198
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 9 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 68
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 142
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 69 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 106
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q+ +
Sbjct: 272 TTIEGHVVKCYWGKETLDMINPVQQQSQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+
Sbjct: 198 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAI 257
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 258 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 291
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 89 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 148
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 149 WDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 196
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE------IASVKIPVGKGCGFVQFANRENAE 114
D T++VG L +VT+ + Q FSQ G I V+ FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 63 AALAAMNGRKIMGKEVKVNWATTPSSQKKDTS 94
>gi|62088100|dbj|BAD92497.1| TIA1 cytotoxic granule-associated RNA-binding protein-like 1
isoform 2 variant [Homo sapiens]
Length = 183
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 83 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 142
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 143 TIEGHVVKCYWGK 155
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
KG GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 17 KGYGFVSFYNKLDAENAIVHMGGQWLGGRKIRTNWATRKPPAPKSTQENNTKQLRFEDV 75
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 83 SPGNQPKTD-TSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAF 141
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG +G +S+R +W
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNW 171
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 SNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+NTT++ GG PN ++D ++ F Q+G I V++ KG F++F ++E A A+ +
Sbjct: 204 TNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKDKGYAFIKFISKEAAARAIEGTH 263
Query: 122 GTVIGKQSVRLSWGR 136
+ + V+ WG+
Sbjct: 264 NSEVQGHPVKCYWGK 278
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 122
T++VG LD +VT++ L F Q G + S KI F+++A+ ++A+ AL +N
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQTALAAMNK 68
Query: 123 TVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKI 157
+ K+ ++++W +P N+ P T ++Q I
Sbjct: 69 RLFLKKEIKVNWATSPGNQ-----PKTDTSQHHHI 98
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+
Sbjct: 196 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 256 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 289
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 194
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 272 TTIEGHVVKCYWGK 285
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 121 NGTVIGKQSVRLSWG--RNPANK 141
G +G + +R +W + PA K
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPK 190
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLN 121
T++VG L +VT+ + Q FSQ G S K+ + FV+F +A +L +N
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAIN 67
Query: 122 GTVIGKQSVRLSWGRNPANKQ 142
G I + V+++W P++++
Sbjct: 68 GRKIMGKEVKVNWATTPSSQK 88
>gi|391347718|ref|XP_003748102.1| PREDICTED: protein no-on-transient A-like [Metaseiulus
occidentalis]
Length = 563
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 108
N P Q P + SS +F+G L P++T++ +R +G + + +P GKG F ++
Sbjct: 116 NQTPDQIPVKKDSSSKCRLFIGNLIPDITEDGMRNLLEPFGNLVELFVPPGKGFAFARYE 175
Query: 109 NRENAEEALHKLNGTVIGKQSVRLSWGRNPAN-KQASLSPFTSS 151
R NAE A L+G + + +++ + A K +LSPF S+
Sbjct: 176 TRANAEAAKSALDGELFSNRQLQVRFASQGAVLKVRNLSPFVSN 219
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 272 TTIEGHVVKCYWGK 285
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
G +G + +R +W R P +++ T ++++
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEV 205
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLN 121
T++VG L +VT+ + Q FSQ G S K+ + FV+F +A +L +N
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMN 67
Query: 122 GTVIGKQSVRLSWGRNPANKQ 142
G I + V+++W P++++
Sbjct: 68 GRKIMGKEVKVNWATTPSSQK 88
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 225 TIEGHVVKCYWGK 237
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 157
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 196 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q+ +
Sbjct: 256 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQSQI 289
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
+AE A+ ++ G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 192
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+
Sbjct: 206 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAI 265
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 266 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 299
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 97 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 156
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 157 WDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 204
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE------IASVKIPVGKGCGFVQFANRENAE 114
D T++VG L +VT+ + Q FSQ G I V+ FV+F +A
Sbjct: 11 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAA 70
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 71 AALAAMNGRKIMGKEVKVNWATTPSSQKKDTS 102
>gi|168037853|ref|XP_001771417.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677335|gb|EDQ63807.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 990
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G EGD T ++VG L P V + L + F ++G IASVKI + CGFV
Sbjct: 169 GSFDEGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRRQRNCGFV 228
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
F NR A+ A ++ G ++ + +R+ WG++
Sbjct: 229 AFMNRNEAQAAKDEMQGIIVYEYELRIGWGKS 260
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQA 143
FV F + AE A+ +NG +G +S+R +W R P +A
Sbjct: 139 YAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRA 181
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 46/74 (62%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
+NTT++ GG +TD+ + + FS++G I +++ KG F++F ++E+A A+ ++
Sbjct: 203 TNTTVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFKDKGYAFIKFVSKESATHAIENIHN 262
Query: 123 TVIGKQSVRLSWGR 136
T I +V+ WG+
Sbjct: 263 TEINGHTVKCFWGK 276
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 122
T++VG LD +V ++ L FSQ G + KI P FV+F N ++A AL +N
Sbjct: 9 TLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTALIAMNK 68
Query: 123 TVIGKQSVRLSWGRNPANK 141
V + ++++W +P N+
Sbjct: 69 RVFLDKEMKVNWATSPGNQ 87
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 105
PG+ S + +FVG L + LR+ F ++GE++ KI GKG GFV
Sbjct: 119 PGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFV 178
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
+ RE+AE A+ ++NG +G++++R +W R P
Sbjct: 179 SYPRREDAERAIDEMNGAWLGRRTIRTNWATRKP 212
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+ NT+++VG + N+ ++++R+ F ++G I V+ +G FV+F +E+A A+ ++N
Sbjct: 253 ADNTSVYVGNI-ANLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMN 311
Query: 122 GTVIGKQSVRLSWGR 136
IG Q VR SWG+
Sbjct: 312 NADIGGQIVRCSWGK 326
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAE 114
+ G T+FV LDP +TDE L F+Q G + KI + FV+F++ A
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQAT 92
Query: 115 EALHKLNGTVIGKQSVRLSWGRNP 138
AL NG + ++ + ++W P
Sbjct: 93 LALQSHNGRELLEKEMHVTWAFEP 116
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 257 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 316
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 317 AIEGHVVKCYWGK 329
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 134 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 193
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 194 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 249
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 214 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 273
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 274 TIEGHVVKCYWGK 286
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 109 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 168
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
G +G + +R +W R P +++ T +F+ +
Sbjct: 169 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 206
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 61
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 93
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 241
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 242 TIEGHVVKCYWGK 254
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 59 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 118
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 119 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 174
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+ + S + IFVG L P + LR F+ +G+I+ ++ KG GF
Sbjct: 88 SPGNTPKLD-TSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGF 146
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPFTSSTQ 153
V F + +AE A+ +NG +G +++R +W + PAN+ + T+ST+
Sbjct: 147 VSFVKKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTK 197
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ +N T++ GG+ +++E +++ FS YG I +++ KG F++F +E A A+
Sbjct: 206 NQSSPTNCTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKDKGYAFIRFGTKEAATHAI 265
Query: 118 HKLNGTVIGKQSVRLSWGR---NPANKQ 142
+ + + Q+V+ SWG+ +P N+Q
Sbjct: 266 VATHNSDVNGQTVKCSWGKEATDPNNQQ 293
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
D T++VG LD VT+E L F Q G++ KI P FV+F++ ++A AL
Sbjct: 9 DCQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGNDPYCFVEFSDHQSAASAL 68
Query: 118 HKLNGTVIGKQSVRLSWGRNPAN 140
+N + + ++++W +P N
Sbjct: 69 LAMNKRLCFGKEMKVNWATSPGN 91
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+SN +FVG L P V+DE L + FS +G ++ ++ +G GF+
Sbjct: 85 QGSQNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 144
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSW 134
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 145 FRDKTDAEQAIATMNGEWLGSRAIRVNW 172
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 49 NGAPGQGPQS------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 102
N APG GP S + + NTT++VG L P T DL F G I+ +++ +G
Sbjct: 223 NFAPGGGPLSFEQVVAQTPAYNTTVYVGNLVPYTTQADLIPLFQGIGYISEIRMQADRGF 282
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ-ASLSP 147
FV+ E+A A+ +L G ++ + ++ SWG++ A+ + ++SP
Sbjct: 283 AFVKLDTHEHAALAIVQLQGQLVHGRPIKCSWGKDRASGETGTMSP 328
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 67
Query: 120 LNGTVIGKQSVRLSW 134
LNG I +R++W
Sbjct: 68 LNGRKIFDTEIRVNW 82
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+ + S + IFVG L P + LR F+ +G+I+ ++ KG GF
Sbjct: 53 SPGNTPKLD-TSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGF 111
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPFTSSTQ 153
V F + +AE A+ +NG +G +++R +W + PAN+ + T+ST+
Sbjct: 112 VSFVKKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTK 162
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ +N T++ GG+ +++E +++ FS YG I +++ KG F++ +E A A+
Sbjct: 171 NQSSPTNCTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKDKGYAFIKVGTKEAATHAI 230
Query: 118 HKLNGTVIGKQSVRLSWGR---NPANKQ 142
+ + + Q+V+ SWG+ +P N+Q
Sbjct: 231 VATHNSDVNGQTVKCSWGKEATDPNNQQ 258
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 160 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 219
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 220 TIEGHVVKCYWGK 232
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 37 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 96
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 97 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 152
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
I+VG L VTDEDLR F YGE++S K+ V KG GFV+ A++E+AE A+
Sbjct: 18 VNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIK 77
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQF 154
+++ + I + V ++ R P N+ ++ F + F
Sbjct: 78 EMHDSDIKGRQVVVNEAR-PRNESSNNGGFRRNDGF 112
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP- 97
+VL N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 129
Query: 98 -----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 141
KG FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+
Sbjct: 202 QSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAI 261
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I +V+ WG+
Sbjct: 262 EATHNTEISGHTVKCFWGK 280
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 60 GDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 115
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAAT 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
AL +N V+ + ++++W +P N+
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 11/101 (10%)
Query: 54 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 93 QGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 152
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
F ++ +AE+A+ +NG +G +++R++W AN++ +P
Sbjct: 153 FRDKTDAEQAIATMNGEWLGSRAIRVNW----ANQKTQGAP 189
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 232 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 291
Query: 124 VIGKQSVRLSWGRNPAN-----KQASLSPFTSSTQFKKI 157
++ + ++ SWG++ A+ SLSP +++ + +
Sbjct: 292 MVHGRPIKCSWGKDRADGGVALPAGSLSPTAAASPYGNM 330
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 120 LNGTVIGKQSVRLSW 134
LNG I +R++W
Sbjct: 76 LNGRKIFDTEIRVNW 90
>gi|440800622|gb|ELR21658.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNGT 123
+F+G L VT+E LRQ F+ YG I + I P CGFV++ NRE AE+A+ LNG
Sbjct: 103 LFIGKLPTTVTEELLRQIFAPYGNIEKLNILKGPADVNCGFVKYDNREEAEKAIRALNGK 162
Query: 124 VIG 126
V+G
Sbjct: 163 VVG 165
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 56 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFA 108
P +G+ + +FVG + NV + +R FS YGEI + I + KGCGFV ++
Sbjct: 2 PDQQGECAKPWKLFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYS 61
Query: 109 NRENAEEALHKLNGTV 124
+E A++A+ L+ V
Sbjct: 62 TKEAADKAISALHSVV 77
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 284 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 343
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 344 TIEGHVVKCYWGK 356
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 161 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 220
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 221 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDV 276
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 279 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 338
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 339 TIEGHVVKCYWGK 351
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 156 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 215
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 216 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 271
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP- 97
+VL N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 129
Query: 98 -----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 141
KG FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+
Sbjct: 202 QSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAI 261
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I +V+ WG+
Sbjct: 262 GATHNTEISGHTVKCFWGK 280
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 60 GDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 115
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVT 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
AL +N V+ + ++++W +P N+
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEA 116
S+TTI+VG + ++ ++L++ F +YG I + +PV KG FVQF + +AEE+
Sbjct: 4 SSTTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEES 63
Query: 117 LHKLNGTVIGKQSVRLSWG 135
+L G IGK+S+RL +
Sbjct: 64 FDRLQGYRIGKRSLRLEFA 82
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 285 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 344
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 345 TIEGHVVKCYWGK 357
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+
Sbjct: 170 QKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 229
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 230 LDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 277
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 141
FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+
Sbjct: 202 QSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAI 261
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I +V+ WG+
Sbjct: 262 GATHNTEISGHTVKCFWGK 280
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 60 GDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 115
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVT 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
AL +N V+ + ++++W +P N+
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ +N T++ GGL +T+E +++ FS +G I +++ KG F++F+ +E+A A+
Sbjct: 160 QSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIV 219
Query: 119 KLNGTVIGKQSVRLSWGR---NPANKQASLSPFTSST 152
++ T I Q+V+ SWG+ +P N Q + +S+T
Sbjct: 220 AVHNTDINGQTVKCSWGKESGDPNNAQQTGQALSSAT 256
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 62 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVKKAEAESAIGAM 121
Query: 121 NGTVIGKQSVRLSWG--RNPANK-QASLSPFT 149
NG +G +S+R +W + PA K +A+ P T
Sbjct: 122 NGQWLGSRSIRTNWATRKPPAPKSEANTKPLT 153
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 205 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 264
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 265 TIEGHVVKCYWGK 277
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
G +G + +R +W R P +++ T +F+ +
Sbjct: 160 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 197
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
AL +NG I + V+++W P++++ L
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKIL 93
>gi|90078618|dbj|BAE88989.1| unnamed protein product [Macaca fascicularis]
Length = 177
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 6 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 65
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 66 TIEGHVVKCYWGK 78
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 214 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 273
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 274 TIEGHVVKCYWGK 286
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 91 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 150
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVR 131
GFV F N+ +AE A+ + G +G + +R
Sbjct: 151 GFVSFYNKLDAENAIVHMGGQWLGGRQIR 179
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 195 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 254
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 255 TIEGHVVKCYWGK 267
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 72 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 131
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 132 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 187
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 215 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 274
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 275 TIEGHVVKCYWGK 287
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
S + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 105 SDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 164
Query: 116 ALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 165 AIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 207
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
AL +NG I + V+++W P++++ L
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKIL 93
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ SN T++ GG+ +T++ +RQ FS +G+I +++ KG F++F + E+A A+
Sbjct: 207 SQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPDKGYSFIRFNSHESAAHAI 266
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQ 142
+NGT I V+ WG+ NP +Q
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQ 297
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG--RNPANK 141
G +G + +R +W + PA K
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPK 190
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 264 TIEGHVVKCYWGK 276
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 196
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 94
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 203 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 262
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 263 TIEGHVVKCYWGK 275
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 139
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 140 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDV 195
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 61
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 93
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 224 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 283
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 284 TIEGHVVKCYWGK 296
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 101 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 160
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 161 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 216
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 205 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 264
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 265 TIEGHVVKCYWGK 277
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
G +G + +R +W R P +++ T +F+ +
Sbjct: 160 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 197
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
AL +NG I + V+++W P++++ L
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKIL 93
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 264 TIEGHVVKCYWGK 276
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 196
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 94
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 264 TIEGHVVKCYWGK 276
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 196
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 94
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 270 TIEGHVVKCYWGK 282
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 202
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 270 TIEGHVVKCYWGK 282
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 202
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 270 TIEGHVVKCYWGK 282
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 202
>gi|66821693|ref|XP_644288.1| hypothetical protein DDB_G0274995 [Dictyostelium discoideum AX4]
gi|60472437|gb|EAL70390.1| hypothetical protein DDB_G0274995 [Dictyostelium discoideum AX4]
Length = 1104
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 126
I++G + N+ ++++R+ +YGEI S++I K C FV F N NA AL LNG +G
Sbjct: 1013 IYIGNVSDNLPEKEIRKECEKYGEIESIRILRKKACAFVNFMNIPNATAALQTLNGKKLG 1072
Query: 127 KQSVRLSWGR 136
VR+++G+
Sbjct: 1073 DTIVRVNYGK 1082
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 126
++VG + +V+++DL+ F +GE+ SV+I K C FV F + A A ++ V+G
Sbjct: 916 LWVGNIGMDVSEDDLKYEFGSFGELESVRILHNKYCAFVNFKDTNEAINAKKGMHNQVLG 975
Query: 127 KQSVRLSWGRNP 138
Q + +++ R+P
Sbjct: 976 SQYIVVNF-RHP 986
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ +N T++ GGL +T+E +++ FS +G I +++ KG F++F+ +E+A A+
Sbjct: 155 QSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIV 214
Query: 119 KLNGTVIGKQSVRLSWGR---NPANKQASLSPFTSST 152
++ T I Q+V+ SWG+ +P N Q + +S+T
Sbjct: 215 AVHNTDINGQTVKCSWGKESGDPNNAQQTGQALSSAT 251
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
S + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F + AE
Sbjct: 52 SEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAES 111
Query: 116 ALHKLNGTVIGKQSVRLSWG--RNPANK-QASLSPFT 149
A+ +NG +G +S+R +W + PA K +A+ P T
Sbjct: 112 AIGAMNGQWLGSRSIRTNWATRKPPAPKSEANAKPLT 148
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I +G F
Sbjct: 83 SPGNQPKTD-TSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAF 141
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG +G +S+R +W
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNW 171
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 63 SNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+NTT++ GG PN +TDE +++ F+Q+G+I ++ KG F++FAN+E+A A+ +
Sbjct: 204 TNTTVYCGGFPPNTITDELIQKHFAQFGQIHDTRVFKDKGYAFIRFANKESAARAIEGTH 263
Query: 122 GTVIGKQSVRLSWGR 136
+ + V+ WG+
Sbjct: 264 NSEVQGHPVKCYWGK 278
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 122
T++VG LD +VT+E L FSQ G + S KI F+++A+ +A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTALAAMNK 68
Query: 123 TVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKI 157
K+ ++++W +P N+ P T ++Q I
Sbjct: 69 RFFLKKEIKVNWATSPGNQ-----PKTDTSQHYHI 98
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 217 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 276
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 277 TIEGHVVKCYWGK 289
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAE 114
D + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 106 DQDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 165
Query: 115 EALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 166 NAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDV 209
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 61
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 93
>gi|255548712|ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
gi|223545356|gb|EEF46861.1| RNA binding protein, putative [Ricinus communis]
Length = 979
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCG 103
G+G +GD T ++VG L P V + L + F ++G IASVKI + CG
Sbjct: 173 GKGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCG 232
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
FV F NR + + A ++ G V+ + +++ WG++ A
Sbjct: 233 FVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVA 268
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP- 97
+VL N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 129
Query: 98 -----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 141
KG FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 122 GTVIGKQSVRLSWGR 136
T I +V+ WG+
Sbjct: 266 NTEISGHTVKCFWGK 280
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 60 GDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 115
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAAT 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
AL +N V+ + ++++W +P N+
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 264 TIEGHVVKCYWGK 276
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDV 196
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 94
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 281 TIEGHVVKCYWGK 293
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDV 213
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 215 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 274
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 275 TIEGHVVKCYWGK 287
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 115
S + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 105 SDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 164
Query: 116 ALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 165 AIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 207
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
AL +NG I + V+++W P++++ L
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKIL 93
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEALHK 119
T ++V LD N+ D+ L++ FS++G I S K+ P G KG GFV F+ NA ALH+
Sbjct: 288 TNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHE 347
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASL 145
+NG +IG++ + ++ + ++A L
Sbjct: 348 MNGKMIGRRPLYVAVAQRKEERKALL 373
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 116
S +F+ LD ++ ++ L F+ +G + S K+ V KG GFVQF N E+A+ A
Sbjct: 90 SGYANVFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVDSIGQSKGYGFVQFDNEESAQNA 149
Query: 117 LHKLNGTVIGKQSV 130
+ +LNG +I + V
Sbjct: 150 IKELNGMLINDKKV 163
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS---VKIPVGKG--CGFVQFANRE 111
Q +G T ++V TDEDL Q FS YG I S +K GK GFV F + +
Sbjct: 176 QVDGSPKFTNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPD 235
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGR 136
+A A+ +LNGT + V L GR
Sbjct: 236 SAVAAVERLNGTTVNDDKV-LYVGR 259
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEEA 116
S N +++VG L+ NV + L Q F++ G I S+++ + G +V F N ++A A
Sbjct: 3 SGNASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANA 62
Query: 117 LHKLNGTVIGKQSVRLSWG-RNPANKQA 143
+ LN T + +S+R+ + R+P+ +++
Sbjct: 63 MEHLNFTPLNGKSIRVMFSNRDPSIRKS 90
>gi|189233691|ref|XP_969160.2| PREDICTED: similar to AGAP005292-PA [Tribolium castaneum]
Length = 358
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFAN 109
P S + + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F
Sbjct: 42 PSSNNKAEHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSFIK 101
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
+ AE A++ +NG +G +S+R +W + PA K
Sbjct: 102 KAEAESAINAMNGQWLGSRSIRTNWATRKPPAPK 135
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ ++N T++ GG+ + ++ L++ F YG I +++ KG F++F+ +E+A A+
Sbjct: 151 QSSATNCTVYCGGITNGLCEDLLQKTFLPYGIIQEIRVFKEKGYAFIRFSTKESATHAIV 210
Query: 119 KLNGTVIGKQSVRLSWGR---NPANKQASLSPFTSS 151
++ + IG Q+V+ SWG+ +P N A+ TS+
Sbjct: 211 GVHNSEIGGQTVKCSWGKESGDPNNAPAASQALTST 246
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 264 TIEGHVVKCYWGK 276
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ + E A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 141 GFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 196
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 94
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 220 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 279
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 280 TIEGHVVKCYWGK 292
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 156
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDV 212
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 222 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 281
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 282 TIEGHVVKCYWGK 294
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 117 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 176
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
G +G + +R +W R P +++ T +F+ +
Sbjct: 177 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 214
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 115
D+ T +++ LDP+VT+E LR+ F ++G+IAS+ I + +G GFV F + E+A+
Sbjct: 207 DAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKR 266
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
AL LNG +G + + ++ + A ++ L
Sbjct: 267 ALEALNGLQLGSKVLYVARAQKKAEREQLL 296
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANRENAEE 115
++ +++VG L P++TD L FS++ +ASV+I G+ G+V F + ++A
Sbjct: 9 AAPASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASH 68
Query: 116 ALHKLNGTVIGKQSVRLSWG-RNPANKQASL 145
A+ N T++ + +R+ W R+P +++ +
Sbjct: 69 AIEAKNHTMLHGKVIRVMWSHRDPDARRSGI 99
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 72 LDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLNGTVI- 125
L ++ + L+ F ++G I S K+ V KG GFVQF + E A A+ KLNG +I
Sbjct: 127 LSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLNGFIID 186
Query: 126 GKQ 128
GKQ
Sbjct: 187 GKQ 189
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 270 TIEGHVVKCYWGK 282
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 202
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ ++++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLSEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQASLS 146
T I V+ WG+ NP + + +S
Sbjct: 272 TTIEGHVVKCYWGKETPDMLNPVQQASQIS 301
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P ++ +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEISTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 121 NGTVIGKQSVRLSWG--RNPANK 141
G +G + +R +W + PA K
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPK 190
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLN 121
T++VG L +VT+ + Q FSQ G S K+ + FV+F +A +L +N
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAIN 67
Query: 122 GTVIGKQSVRLSWGRNPANKQ 142
G I + V+++W P++++
Sbjct: 68 GRKILGKEVKVNWATTPSSQK 88
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 306 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 365
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 366 TIEGHVVKCYWGK 378
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 183 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 242
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 243 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 298
>gi|294888423|ref|XP_002772458.1| pre-mRNA-splicing factor SLT11, putative [Perkinsus marinus ATCC
50983]
gi|239876684|gb|EER04274.1| pre-mRNA-splicing factor SLT11, putative [Perkinsus marinus ATCC
50983]
Length = 367
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 61 DSSNTTIFVGGLDPN--VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
D+S TT+++GG+DPN + + ++R F ++G+I S+ + C FV+F +R++AE+A
Sbjct: 225 DTSITTLYIGGIDPNAQIGESNIRAEFEEFGQIDSIVLVEKSNCAFVEFTSRQSAEKAAA 284
Query: 119 KLNGT--VIGKQSVRLSWGR 136
+ G+ VI +R+SW +
Sbjct: 285 EKGGSNLVINGARLRVSWAK 304
>gi|156546667|ref|XP_001603806.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Nasonia
vitripennis]
Length = 409
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D+S TT+++G + +T++ LR F QYGEI SV + C F+++ NR AE A +
Sbjct: 228 DTSITTLYIGNIGEVLTEKTLRDHFYQYGEIRSVTMVAKNQCAFIEYTNRSAAELAAERT 287
Query: 120 LNGTVIGKQSVRLSWGRN 137
N ++G + + + WGR+
Sbjct: 288 FNKLILGGRRLNIKWGRS 305
>gi|353234382|emb|CCA66408.1| hypothetical protein PIIN_00094 [Piriformospora indica DSM 11827]
Length = 699
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG------------- 101
G + GD + +FV L +VT++ L + F Q GEI SVKI +G
Sbjct: 173 GSRDRGDPETSNLFVAHLPDDVTEDRLGEYFGQCGEITSVKIMWPRGETVGDMSRRSKTT 232
Query: 102 --CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
GFV F R++AE ALH+L+G G ++R+ W +
Sbjct: 233 GLSGFVSFKRRKDAEMALHRLDGVTWGGSALRVGWSK 269
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 333 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 392
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 393 TIEGHVVKCYWGK 405
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 210 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 269
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 270 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 325
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 281 TIEGHVVKCYWGK 293
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 213
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 220 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 279
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 280 TIEGHVVKCYWGK 292
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 156
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 212
>gi|380023603|ref|XP_003695607.1| PREDICTED: nucleolin-like [Apis florea]
Length = 360
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ +N T++ GGL +T+E +++ FS +G I +++ KG F++F+ +E+A A+
Sbjct: 133 QSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIV 192
Query: 119 KLNGTVIGKQSVRLSWGR---NPANKQASLSPFTSST 152
++ T I Q+V+ SWG+ +P N Q + +S+T
Sbjct: 193 AVHNTDINGQTVKCSWGKESGDPNNAQQTGQALSSAT 229
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK-QASLSPFT 149
KG GFV F + AE A+ +NG +G +S+R +W + PA K +A+ P T
Sbjct: 74 KGYGFVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANAKPLT 126
>gi|281208502|gb|EFA82678.1| hypothetical protein PPL_04372 [Polysphondylium pallidum PN500]
Length = 918
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 126
I++G + N+ ++++R+ +YGEI SV+I K C FV F N NA AL LNG +G
Sbjct: 689 IYIGNVSDNLPEKEIRKECEKYGEIESVRILRKKACAFVNFMNIPNATVALQALNGKKLG 748
Query: 127 KQSVRLSWGR 136
VR+++G+
Sbjct: 749 DTIVRVNYGK 758
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 53 GQGPQSEGDSS---NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 109
G P EG+S + ++VG + +V++E+L+ F YGE+ SV+I + C FV F +
Sbjct: 573 GVDPIMEGNSDEQPSRILWVGNIGMDVSEEELKSEFGVYGELESVRILHDRFCAFVNFKD 632
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRNP 138
NA A ++ V+G Q + +++ R+P
Sbjct: 633 AINAANAKRNMHNQVLGSQFIVVNF-RHP 660
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 281 TIEGHVVKCYWGK 293
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 213
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 211 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 270
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 271 TTIEGHVVKCYWGKETLDMLNPVQQQNQI 299
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 166
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 167 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 202
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 225 TIEGHVVKCYWGK 237
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 157
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALH 118
NT +++ L+ N+ DE LR+ F++YG I S K+ V +G GFV F + E+A AL
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
++NG ++G + + ++ + +++A L
Sbjct: 376 EMNGKMVGSKPLYVALAQRKEDRKAKL 402
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEA 116
S IF+ LD ++ ++ L F +G I S KI P G +G GFVQF E+A+ A
Sbjct: 120 SGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSA 179
Query: 117 LHKLNGTVIGKQSV 130
+ KLNG +I + V
Sbjct: 180 IDKLNGMLINDKKV 193
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKG-C-GFVQFANRENAEEALHK 119
+ ++V L VTD++L++ F +YG I S + GK C GFV F N + A +A+ +
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQE 273
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASL 145
LNG + + + + + + ++ L
Sbjct: 274 LNGKIFNDKELYVGRAQKKSEREMEL 299
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALH 118
T+++VG L +V D L FSQ G + SV++ G +V + N+ +A AL
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 119 KLNGTVIGKQSVRLSWG-RNPANKQA 143
LN T I + +R+ + R+P+++++
Sbjct: 95 LLNFTPINGKPIRIMYSNRDPSSRKS 120
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 241
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 242 TIEGHVVKCYWGK 254
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 59 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 118
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 119 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDV 174
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 115
D+ T +++ LDP+VT+E LR+ F ++G+IAS+ I + +G GFV F + E+A+
Sbjct: 187 DAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKR 246
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
AL LNG +G + + ++ + A ++ L
Sbjct: 247 ALEALNGLQLGSKVLYVARAQKKAEREQLL 276
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANRENAEE 115
++ +++VG L P++TD L FS++ +ASV+I G+ G+V F + ++A
Sbjct: 9 AAPASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASH 68
Query: 116 ALHKLNGTVIGKQSVRLSWG-RNPANKQASL 145
A+ N T++ + +R+ W R+P +++ +
Sbjct: 69 AIEAKNHTMLHGKVIRVMWSHRDPDARRSGI 99
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
+FV L ++ + L+ F ++G I S K+ V KG GFVQF + E A A+ KLN
Sbjct: 102 VFVKNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLN 161
Query: 122 GTVI-GKQ 128
G +I GKQ
Sbjct: 162 GFIIDGKQ 169
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 241
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 242 TIEGHVVKCYWGK 254
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 59 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 118
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 119 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 174
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ N T++ GG+ +T++ +RQ FS +G+I +++ KG F++F++ E+A A+
Sbjct: 207 SQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAI 266
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|428185581|gb|EKX54433.1| hypothetical protein GUITHDRAFT_99912 [Guillardia theta CCMP2712]
Length = 439
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 61 DSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D S TTI+VG + N VT+ D+ F YGE+ SV+I + C FV + RE AE+A+ K
Sbjct: 270 DKSITTIWVGLVPGNPVTERDVMDQFYAYGEVKSVQIVLDANCAFVTYTTREAAEQAVEK 329
Query: 120 LNGTV-IGKQSVRLSWGR 136
L+G + I +++ WG+
Sbjct: 330 LHGNLTINGLKLKIQWGK 347
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALH 118
NT +++ L+ N+ DE LR+ F++YG I S K+ V +G GFV F + E+A AL
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
++NG ++G + + ++ + +++A L
Sbjct: 376 EMNGKMVGSKPLYVALAQRKEDRKAKL 402
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEA 116
S IF+ LD ++ ++ L F +G I S KI P G +G GFVQF E+A+ A
Sbjct: 120 SGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSA 179
Query: 117 LHKLNGTVIGKQSV 130
+ KLNG +I + V
Sbjct: 180 IDKLNGMLINDKKV 193
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKG--CGFVQFANRENAEEALHK 119
+ ++V L VTD++L++ F +YG I S + GK GFV F N + A +A+ +
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQE 273
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASL 145
LNG + + + + + + ++ L
Sbjct: 274 LNGKIFNDKELYVGRAQKKSEREMEL 299
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALH 118
T+++VG L +V D L FSQ G + SV++ G +V + N+ +A AL
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 119 KLNGTVIGKQSVRLSWG-RNPANKQA 143
LN T I + +R+ + R+P+++++
Sbjct: 95 LLNFTPINGKPIRIMYSNRDPSSRKS 120
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 225 TIEGHVVKCYWGK 237
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDV 157
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I + GKG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQILETRAFPGKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 225 TIEGHVVKCYWGK 237
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P + + T +F+ +
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKTTQESTTKQLRFEDV 157
>gi|330846362|ref|XP_003295005.1| hypothetical protein DICPUDRAFT_51830 [Dictyostelium purpureum]
gi|325074406|gb|EGC28470.1| hypothetical protein DICPUDRAFT_51830 [Dictyostelium purpureum]
Length = 244
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S D +NT I+V LDP + + L+ F YGEI+ +K+ K FV + RE+AE A
Sbjct: 60 SSTDPTNTAIYVSQLDPYIDEGVLQTIFGAYGEISFIKMLNNKFSAFVNYVTRESAEAAF 119
Query: 118 HKLNGTVIGKQSVRLSWGRNPA 139
LN +G +++ WG+N A
Sbjct: 120 -GLNNYAVGNSRLKIQWGKNIA 140
>gi|387907184|ref|YP_006337520.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582077|gb|AFJ90855.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 90
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV--------GKGCGFVQFANRENAEE 115
NT ++VG L ++T+++L++ F GE+ VKI KG GF++ +N ENA++
Sbjct: 3 NTKLYVGNLSYDMTEQELKKYFESVGEVTHVKIIFDESTSSKRSKGFGFIEMSNEENAKQ 62
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANK 141
A+ KLNGT + +++ +S R A K
Sbjct: 63 AIEKLNGTELMGRNIIVSAARPRAKK 88
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ N T++ GG+ +T++ +RQ FS +G+I +++ KG F++F++ E+A A+
Sbjct: 196 SQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 256 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 289
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 194
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|405971196|gb|EKC36046.1| Pre-mRNA-splicing factor RBM22 [Crassostrea gigas]
Length = 434
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT+++G L + +++LR F Q+GEI + + + C FVQF +R +AE A K
Sbjct: 228 DKTITTLYIGNLGEKIGEKELRDHFYQFGEIRMINVVAKQQCAFVQFTSRSSAEAAAEKS 287
Query: 120 LNGTVIGKQSVRLSWGRN 137
N ++G + + + WGR+
Sbjct: 288 FNKLIVGGRRLTIKWGRS 305
>gi|432115353|gb|ELK36770.1| Nucleolysin TIAR [Myotis davidii]
Length = 284
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 154 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 213
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 214 TIEGHVVKCYWGK 226
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
KG GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 88 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 146
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 335 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 394
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 395 TIEGHVVKCYWGK 407
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 212 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 271
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 272 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 327
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 207 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 90 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 149
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 150 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 205
>gi|45872602|gb|AAH68194.1| Tial1 protein [Mus musculus]
Length = 269
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 98 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 157
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 158 TIEGHVVKCYWGK 170
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 76 VTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQS 129
+T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ + G +G +
Sbjct: 2 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 61
Query: 130 VRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+R +W R P +++ T +F+ +
Sbjct: 62 IRTNWATRKPPAPKSTQETNTKQLRFEDV 90
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GCGFVQFANRENAE 114
D+++ IFVG L P++ LR F+Q+G ++ ++ GK G GFV + + AE
Sbjct: 87 DTNHYHIFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKHEAE 146
Query: 115 EALHKLNGTVIGKQSVRLSWG-RNP---ANKQASLSPFTSSTQFKKI 157
A+ +NG +G +++R +W R P N+Q S S T S + +I
Sbjct: 147 NAMQSMNGAWLGGRNIRTNWATRKPGATTNRQNSDSSSTKSLNYDEI 193
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++VG L T+E LR+ F +G IA +++ K F+++ + ++A A+ ++GT
Sbjct: 201 NCTVYVGNLSAGTTEETLRRIFIPFGPIADIRVFPDKNYAFIRYMSHDHATNAIVVIHGT 260
Query: 124 VIGKQSVRLSWGR 136
+ V+ SWG+
Sbjct: 261 AVEGSQVKCSWGK 273
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 68 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG----CGFVQFANRENAEEALHKLNGT 123
++G LD T++ + + F+++G I K+ G GFV++A + +A AL +NG
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGNDPYGFVEYAEKNSAARALDAMNGY 67
Query: 124 VIGKQSVRLSWGRNPANKQ 142
G ++++++W N + ++
Sbjct: 68 SFGSRAIKVNWATNSSMRK 86
>gi|118344182|ref|NP_001071914.1| zinc finger protein [Ciona intestinalis]
gi|92081514|dbj|BAE93304.1| zinc finger protein [Ciona intestinalis]
Length = 413
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D + TT+++GGL V +EDLR F YGEI S+ + + FVQF R +AE A +
Sbjct: 231 DQTITTLYIGGLGEAVNEEDLRDQFYHYGEIRSIHMATNQNYAFVQFTKRSDAETAAKRT 290
Query: 121 NGTVIGK-QSVRLSWGRN 137
G ++ K + + + WG++
Sbjct: 291 AGRLMIKGKRIVVRWGKS 308
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I +G F
Sbjct: 83 SPGNQPKTD-TSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAF 141
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +NG +G +S+R +W
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNW 171
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 122
T++VG LD +VT++ L F Q G + S KI F+++AN ++A+ AL +N
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYANHQSAQTALAAMNK 68
Query: 123 TVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKI 157
+ K+ ++++W +P N+ P T ++Q I
Sbjct: 69 RLFLKKEIKVNWATSPGNQ-----PKTDTSQHHHI 98
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 63 SNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+NTT++ GG N + D + + F +G+I V++ KG F++F N+E+A A+ +
Sbjct: 204 TNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKDKGYAFIKFNNKESAARAIEGTH 263
Query: 122 GTVIGKQSVRLSWGRNPANKQAS 144
+ I +V+ WG+ + AS
Sbjct: 264 NSEIQGYAVKCYWGKENGGEMAS 286
>gi|417397890|gb|JAA45978.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily [Desmodus rotundus]
Length = 253
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 141 TIEGHVVKCYWGK 153
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
KG GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 15 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 73
>gi|71297004|gb|AAH30025.1| TIAL1 protein [Homo sapiens]
Length = 252
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 141 TIEGHVVKCYWGK 153
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
KG GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 15 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 73
>gi|427796663|gb|JAA63783.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 965
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 20/123 (16%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KGC 102
P G GD + T +++G L+P +T+++L + F +YG +ASVKI P + C
Sbjct: 183 PSLGSFDTGDPNTTNLYLGNLNPKMTEQELCEIFGRYGPLASVKIMWPRSQEERQRKRNC 242
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR-----------NPANKQASLSPFTSS 151
GFV + NR++ E A+ L+G + +++ WG+ PA + +L P S
Sbjct: 243 GFVAYMNRKDGERAIKHLSGQEVMGFEMKMGWGKAVPIPPHPVYIPPAMVELTLPPPPSG 302
Query: 152 TQF 154
F
Sbjct: 303 LPF 305
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 77 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFN 128
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
G GFV+F + AE A+ LNG I + +R++W N ANK+ + + F
Sbjct: 129 SKGANYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHF 182
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 112
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 176 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 235
Query: 113 AEEALHKLNGTVIGKQSVRLSW 134
AE+AL ++G +G +++R +W
Sbjct: 236 AEKALTSMDGEWLGSRAIRCNW 257
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T D+ F +G + ++ +G F++ ENA A+ +LNG
Sbjct: 308 TTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYN 367
Query: 125 IGKQSVRLSWG--RNPANK------QASLSPFTSS 151
+ + ++ SWG R P + Q + SPF SS
Sbjct: 368 VNGRPLKCSWGKDRPPTGQFDNFPGQQANSPFASS 402
>gi|168046580|ref|XP_001775751.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672903|gb|EDQ59434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 990
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG---------KGCGFVQFAN 109
EGD T ++VG L P V + L + F ++G IASVKI + CGFV F N
Sbjct: 184 EGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRRQRNCGFVAFMN 243
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRN 137
R A+ A ++ G ++ +R+ WG++
Sbjct: 244 RNEAQAAKDEMQGIIVYDYELRIGWGKS 271
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 203 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 262
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 263 TTIEGHVVKCYWGKETLDMINPVQQQNQI 291
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 159 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 194
>gi|148685701|gb|EDL17648.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Mus musculus]
gi|149067623|gb|EDM17175.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_c [Rattus norvegicus]
Length = 252
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 141 TIEGHVVKCYWGK 153
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
KG GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 15 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDV 73
>gi|332226897|ref|XP_003262629.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Nomascus leucogenys]
Length = 411
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 232 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 291
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 292 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 325
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 126
+FVG L P +T ED++ F+ +G I+S + + ++F++ EN A+ ++ G +G
Sbjct: 145 VFVGDLSPEITTEDIKAAFAPFGRISSNQFYMN---AIIKFSDAEN---AIQQMGGQWLG 198
Query: 127 KQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
+ +R +W R P A S + S+T K++ Y+
Sbjct: 199 GRQIRTNWATRKPP---APKSTYESNT--KQLSYD 228
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 40 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 99
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 100 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 132
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ +NTT++ GG+ +T++ +R FS +G I +++ KG F++F + E A A+
Sbjct: 302 QASPTNTTVYCGGITKGLTEDLMRNTFSNFGPIQEIRVFPEKGYSFIRFFSHEVAAMAIV 361
Query: 119 KLNGTVIGKQSVRLSWGR 136
+NGT I Q+V+ SWG+
Sbjct: 362 TVNGTQIEGQAVKCSWGK 379
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 61 DSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENA 113
D+SN +FVG L P + DL+ F+ +G+I+ ++ +G GFV F N+ +A
Sbjct: 197 DTSNHHHVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKVDA 256
Query: 114 EEALHKLNGTVIGKQSVRLSWG 135
E A+ ++G +G +++R +W
Sbjct: 257 ENAIGAMSGQWLGGRAIRTNWA 278
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQFANR 110
P E +S T++VG L VT++ + Q F G S K+ + + G FV+F +
Sbjct: 105 PSMEDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKM-ISEHAGNDPYCFVEFYDH 163
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
+A AL +NG I + V+++W P+ + S
Sbjct: 164 NHASAALTAMNGRKIMHKEVKVNWATTPSGNKKDTS 199
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 272 TTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 272 TTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 272 TTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 272 TTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 214 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 273
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 274 TTIEGHVVKCYWGKETLDMINPVQQQNQI 302
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 110 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 169
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 170 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 205
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE------IASVKIPVGKGCGFVQFANRENAE 114
D T++VG L +VT+ + Q FSQ G I V+ FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAA 62
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
AL +NG I + V+++W P++++ S T
Sbjct: 63 AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 97
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 203 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 262
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 263 TTIEGHVVKCYWGKETLDMINPVQQQNQI 291
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 159 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 194
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 226 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 285
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 286 TTIEGHVVKCYWGKETLDMLNPVQQQNQI 314
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 122 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 181
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 182 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 217
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 78 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFN 129
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
G GFV+F + AE A+ LNG I + +R++W N NK+ + S F
Sbjct: 130 SKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSSHF 183
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 112
E SS+ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 177 EDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 236
Query: 113 AEEALHKLNGTVIGKQSVRLSW 134
AE+AL+ ++G +G +++R +W
Sbjct: 237 AEKALNAMDGEWLGSRAIRCNW 258
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T DL F +G + ++ +G F++ ENA A+ +LNG
Sbjct: 309 TTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYN 368
Query: 125 IGKQSVRLSWG--RNPANK------QASLSPFTSS 151
+ + ++ SWG R P + Q SPF SS
Sbjct: 369 VNGRPLKCSWGKDRPPTGQFDNFSGQQPNSPFNSS 403
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGC 102
N A Q + SS+ +FVG L P +T +D++ F +G+I+ ++ KG
Sbjct: 70 NWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGY 129
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 139
GFV F N+ +AE A+ ++ G +G + +R +W R PA
Sbjct: 130 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPA 167
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G I +++ KG FV+F + E A A+ +NG
Sbjct: 192 SNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFVRFNSHEAAAHAIVSVNG 251
Query: 123 TVIGKQSVRLSWGRNPAN 140
T I V+ WG+ +
Sbjct: 252 TTIEGYVVKCYWGKETTD 269
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 68 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKLNG 122
+VG L +VT+ + + F Q G S K+ V C FV+F +A + +NG
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHATATIAAMNG 59
Query: 123 TVIGKQSVRLSWGRNPANKQASLS 146
I + V+++W P +++ S
Sbjct: 60 RKILGKEVKVNWATTPTSQKKDTS 83
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 207 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 196 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 256 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 289
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 194
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|396486315|ref|XP_003842386.1| hypothetical protein LEMA_P081460.1 [Leptosphaeria maculans JN3]
gi|312218962|emb|CBX98907.1| hypothetical protein LEMA_P081460.1 [Leptosphaeria maculans JN3]
Length = 217
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 48 SNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--------PV 98
++G PG P+ N ++VGGLDP VT++ LRQ F G I SVKI P
Sbjct: 66 TSGQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHIQSVKIIPDKTASSPS 125
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135
G GFV++ + AE + LNG I +R++W
Sbjct: 126 GFNYGFVEYDDPGAAERGMATLNGRRIHNTEIRVNWA 162
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 196 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 256 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 289
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
+AE A+ ++ G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 192
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 196 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 256 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 289
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
+AE A+ ++ G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 192
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +T+ +RQ FS +G+I +++ KG F++F++ E+A A+ +NGT
Sbjct: 203 NCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGT 262
Query: 124 VIGKQSVRLSWGRNPANKQASLSPF 148
I V+ WG+ + ++ P
Sbjct: 263 TIEGHVVKCYWGKESPDMAKNVQPM 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T +D+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGY 139
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
GFV F N+ +AE A+ + G +G + +R +W + PA K
Sbjct: 140 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK 180
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
E +S T++VG L +VT+ + Q F+Q G S K+ FV+F +A
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 93
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 196 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 256 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 289
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 194
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 207 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 272 TTIEGHVVKCYWGKETLDMINPVQQQNQI 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 196 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 255
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 256 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 289
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
+AE A+ ++ G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 192
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 252 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 311
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 312 TTIEGHVVKCYWGK 325
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 148 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 207
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 208 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 243
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 68 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLNGT 123
+VG L +VT+ + Q FSQ G + K+ + FV+F +A AL +NG
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMNGR 109
Query: 124 VIGKQSVRLSWGRNPANKQASLSPFT 149
I + V+++W P++++ S T
Sbjct: 110 KIMGKEVKVNWATTPSSQKKDTSSST 135
>gi|294942681|ref|XP_002783643.1| pre-mRNA-splicing factor SLT11, putative [Perkinsus marinus ATCC
50983]
gi|239896145|gb|EER15439.1| pre-mRNA-splicing factor SLT11, putative [Perkinsus marinus ATCC
50983]
Length = 367
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 61 DSSNTTIFVGGLDPN--VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
D+S TT+++GG+DPN + + ++R F ++G+I S+ + C FV+F R++AE+A
Sbjct: 225 DTSITTLYIGGIDPNAQIGESNIRAEFEEFGQIDSIVLVEKSNCAFVEFTGRQSAEKAAA 284
Query: 119 KLNGT--VIGKQSVRLSWGR 136
+ G+ VI +R+SW +
Sbjct: 285 EKGGSNLVINGARLRVSWAK 304
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
S + +FVGGL TD+++++ FS +GE+ VKI +G GFV FA ++AE A
Sbjct: 40 SGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAA 99
Query: 117 LHKLNGTVIGKQSVRLSWG--RNPANKQA 143
L L+G + +++R+++ ++P ++Q+
Sbjct: 100 LQALDGRDLAGRTIRVNYATKQSPQDRQS 128
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 179 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 238
Query: 123 TVIGKQSVRLSWGR------NPANKQASL 145
T I V+ WG+ NP +Q +
Sbjct: 239 TTIEGHVVKCYWGKETLDMINPVQQQNQI 267
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 75 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 134
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 135 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 170
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR------NPANKQ 142
T I V+ WG+ NP +Q
Sbjct: 272 TTIEGHVVKCYWGKETPDMINPIQQQ 297
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG--RNPANK 141
G +G + +R +W + PA K
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPK 190
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ ++++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLSEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEY 159
T I V+ WG+ + L+P ++ +I +
Sbjct: 272 TTIEGHVVKCYWGKETPDM---LNPVQQVSEASQISF 305
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P ++ +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEISTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 121 NGTVIGKQSVRLSWG--RNPANK 141
G +G + +R +W + PA K
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPK 190
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLN 121
T++VG L +VT+ + Q FSQ G S K+ + FV+F +A +L +N
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAIN 67
Query: 122 GTVIGKQSVRLSWGRNPANKQ 142
G I + V+++W P++++
Sbjct: 68 GRKILGKEVKVNWATTPSSQK 88
>gi|298709098|emb|CBJ31046.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1237
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 48 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PV 98
S+ P G +GD ++T +++G L P VT+E L++ FS +G++ S+KI
Sbjct: 221 SDQTPSSGSMDDGDPTSTNLYLGNLAPTVTEEALQEAFSPFGKVYSIKIMWPRTDEERAR 280
Query: 99 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQAS 144
+ CGF+ F +E+A A + T + + WG+ P NK A+
Sbjct: 281 KRNCGFLSFWRKEDAVNAKRAMMDTDFEGHRMSIGWGK-PINKLAN 325
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 291 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 350
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 351 TTIEGHVVKCYWGK 364
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 146 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 205
Query: 121 NGTVIGKQSVRLSWG--RNPANK 141
G +G + +R +W + PA K
Sbjct: 206 GGQWLGGRQIRTNWATRKPPAPK 228
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 41 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 100
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 101 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 133
>gi|395841399|ref|XP_003793527.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40,
partial [Otolemur garnettii]
Length = 480
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 301 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 360
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+NGT I V+ WG+
Sbjct: 361 VSVNGTTIEGHVVKCYWGK 379
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 158 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 217
Query: 121 NGTVIGKQSVRLSWG--RNPANK 141
G +G + +R +W + PA K
Sbjct: 218 GGQWLGGRQIRTNWATRKPPAPK 240
>gi|318087196|gb|ADV40190.1| putative proline and glutamine-rich splicing factor [Latrodectus
hesperus]
Length = 331
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 40 LVLIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 99
L + G +N +G ++ + +FVG L ++TDE+ R+ F Q+GE+ V +
Sbjct: 84 LEFMSGPTTNLTSKEGVSAKKFTGRCRLFVGNLPTSITDEEFRKMFEQFGELGEVFLHKQ 143
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN-PANKQASLSPFTSS 151
KG GFV R+NAE A L+ T+ + +R+ + + A K +LSP+ S+
Sbjct: 144 KGFGFVNLDTRQNAENAKAALDFTMKDGRQLRVRFATHGAALKIKNLSPWISN 196
>gi|242021295|ref|XP_002431080.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212516329|gb|EEB18342.1| Heterogeneous nuclear ribonucleoprotein A1, putative, partial
[Pediculus humanus corporis]
Length = 302
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
++N T++ GG+ +T+E +++ FS YG I +K+ KG FV+F+ +E+A A+ ++
Sbjct: 105 ATNCTVYCGGITNGLTEELVQKHFSPYGTIQEIKVFKDKGYAFVRFSTKESAAHAIVAVH 164
Query: 122 GTVIGKQSVRLSWGRNPANKQA 143
T I Q+V+ SWG+ ++ A
Sbjct: 165 NTEINGQTVKCSWGKENSDMTA 186
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L P + + LR F+ +GEI+ ++ KG GFV F + A+ A+ +
Sbjct: 4 IFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAIAAM 63
Query: 121 NGTVIGKQSVRLSWG-RNPA 139
NG +G +S+R +W R P+
Sbjct: 64 NGRWLGSRSIRTNWATRKPS 83
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEA 116
S + +FVGGL TD+++++ FS +GE+ VKI +G GFV FA ++AE A
Sbjct: 40 SGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAA 99
Query: 117 LHKLNGTVIGKQSVRLSWG--RNPANKQA 143
L L+G + +++R+++ ++P ++Q+
Sbjct: 100 LQALDGRDLAGRTIRVNYATKQSPQDRQS 128
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 121
+++ LD +TD+ LR+ FS +G+I S KI V KG GFV F+ RE A +AL ++N
Sbjct: 207 LYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMN 266
Query: 122 GTVIGKQSVRLSWGRNPANKQASL 145
G +I + + +++ + +++A L
Sbjct: 267 GKMISGKPLYVAFAQRKEDRKAML 290
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 116
S + IF+ LD + ++ L FS +G I S K+ + KG GFVQ+ E+A+ A
Sbjct: 8 SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSA 67
Query: 117 LHKLNGTVIGKQSV 130
+ LNG +I + V
Sbjct: 68 MKSLNGMLINDKPV 81
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLN 121
+FV L + T +DL + FS YG I S + +G + FV F + ++A A+ +LN
Sbjct: 104 VFVKNLSESTTKDDLVKVFSGYGTITSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELN 163
Query: 122 GTVI 125
G I
Sbjct: 164 GKKI 167
>gi|321454568|gb|EFX65733.1| hypothetical protein DAPPUDRAFT_204255 [Daphnia pulex]
Length = 472
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
S + ++VG L ++ ++DL++ FS YGEIA V + KG FV+ R N+E+A +L+
Sbjct: 98 SGRSRLYVGNLGNDIVEQDLKEYFSAYGEIAEVFLNKEKGFAFVRLDYRSNSEKAKRELD 157
Query: 122 GTVIGKQSVRL-SWGRNPANKQASLSPFTSSTQFKK 156
G V+ +++R+ S + A + +LSPF ++ +K
Sbjct: 158 GKVLKGRTLRVRSAPHSAAVRVKNLSPFVTNELLEK 193
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 201 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 260
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 261 TTIEGHVVKCYWGK 274
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
GFV F N+ +AE A+ ++ G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 192
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|355724189|gb|AES08142.1| TIA1 cytotoxic granule-associated RNA binding protein [Mustela
putorius furo]
Length = 261
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 83 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 142
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 143 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 176
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIE 158
KG GFV F N+ +AE A+ ++ G +G + +R +W R P A S + S+T K++
Sbjct: 23 KGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLS 77
Query: 159 YN 160
Y+
Sbjct: 78 YD 79
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQA 143
FV F + +AE A++ +NG +G +S+R +W R P +A
Sbjct: 139 YAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRA 181
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
+N T++ GG+ +T+E + Q FS++G I ++ KG F++F+ +E A A+ ++
Sbjct: 203 TNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFRDKGYAFIKFSTKEAATTAIEAVHN 262
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 263 TEINGHPVKCFWGK 276
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 61 DSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEA 116
D SN T++VG LDP+VT+E L F+ G + + K+ P F++F A A
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAATA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANK 141
L +NG + + ++++W P N+
Sbjct: 63 LAAMNGRLFLDKEMKVNWATTPGNQ 87
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 26 HRNSSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQP 84
H ++ +F + V+ N A GD++N IFVG L NV + LR+
Sbjct: 47 HADAQEAKFRMDQRTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKT 106
Query: 85 FSQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 138
F +GEI+ V++ P KG GFV F RE+A +A+ +++ IG + V+ +W
Sbjct: 107 FEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 166
Query: 139 ANKQAS 144
N S
Sbjct: 167 NNPTQS 172
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
NTT++VG L P+V D +L+Q FSQYG I K+ KG F++
Sbjct: 193 NTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFIK 235
>gi|194379766|dbj|BAG58235.1| unnamed protein product [Homo sapiens]
Length = 181
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A + +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHVIVSVNGT 140
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 141 TIEGHVVKCYWGK 153
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
KG GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 15 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 73
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In Cytotoxic
Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCG 103
G+ G Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG G
Sbjct: 1 GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 60
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
FV F N+ +AE A+ ++ G +G + +R +W + PA K
Sbjct: 61 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK 100
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 121
+++ LD +TD+ LR+ FS +G+I S KI V KG GFV F+ RE A +AL ++N
Sbjct: 406 LYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMN 465
Query: 122 GTVIGKQSVRLSWGRNPANKQASL 145
G +I + + +++ + ++A L
Sbjct: 466 GKMISGKPLYVAFAQRKEERKAML 489
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 116
S + IF+ LD + ++ L FS +G I S K+ + KG GFVQ+ E+A+ A
Sbjct: 207 SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSA 266
Query: 117 LHKLNGTVIGKQSV 130
+ LNG +I + V
Sbjct: 267 MKSLNGMLINDKPV 280
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALH 118
T+++VG L+ NVTD L + FSQ G++ SV++ G +V ++N +A A+
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 119 KLNGTVIGKQSVRLSWG-RNPANKQA 143
LN + + +R+ + R+P+++++
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSSRRS 207
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLN 121
+FV L + T EDL + FS+YG I S + +G + GFV F + ++A A+ +LN
Sbjct: 303 VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELN 362
Query: 122 GTVI 125
G I
Sbjct: 363 GKKI 366
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+ + S + IFVG L P + + L++ F+ +GEI+ ++ KG GF
Sbjct: 75 SPGNTPKQDT-SKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVVRDPQTLKSKGYGF 133
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
V F + +AE A+ +NG +G +++R +W + PA++
Sbjct: 134 VSFVKKTDAENAIATMNGQWLGSRAIRTNWATRKPPASR 172
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 122
T++VG LDP+VT+E + F+Q G + KI P FV+F + + A AL +N
Sbjct: 1 TLYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPGNDPYCFVEFTDHQAAAAALLAMNK 60
Query: 123 TVIGKQSVRLSWGRNPAN 140
+ ++++W +P N
Sbjct: 61 RQCLGKEMKVNWATSPGN 78
>gi|350582294|ref|XP_003481239.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Sus scrofa]
Length = 220
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 41 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 100
Query: 118 HKLNGTVIGKQSVRLSWGR------NPANKQASL 145
+NGT I V+ WG+ NP +Q +
Sbjct: 101 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI 134
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 151 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 210
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
FV F + AE A++ +NG +G +S+R +W
Sbjct: 211 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 243
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 126
++ GG +TDE +++ FS +G I +++ KG F++F +E A A+ + T I
Sbjct: 270 LYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEIN 329
Query: 127 KQSVRLSWGR 136
V+ WG+
Sbjct: 330 GSIVKCFWGK 339
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S+ T++VG LD V+++ L FSQ G + KI P FV+F N + A AL
Sbjct: 76 ESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 135
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N ++ ++++W +P N+
Sbjct: 136 AAMNKRSFLEKEMKVNWATSPGNQ 159
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 52 PGQGPQSEGDSS-----------NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG- 99
P +GPQ +S + T+F+GGL +T++D+ F+++GE+ V++P
Sbjct: 471 PARGPQDRAESRAKHFKDERSAPSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEI 530
Query: 100 -----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 135
KG G+V+F +++NA +AL +NG +G + +R+ +
Sbjct: 531 DSGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIRIDFA 571
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAE 114
D+ T++VG L NV ++ L+ F QYG + ++ +G G+V FA A
Sbjct: 390 DNGIKTLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEAL 449
Query: 115 EALHKLNGTVIGKQSVR--LSWGRNPANKQAS 144
A + +G + +++R L R P ++ S
Sbjct: 450 RASKEAHGKELDGRALRVDLQPARGPQDRAES 481
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 272 TTIEGHVVKCYWGK 285
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 168 GGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 203
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLSPFT 149
L +NG I + V+++W P++++ S T
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTSSST 95
>gi|302765773|ref|XP_002966307.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
gi|300165727|gb|EFJ32334.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
Length = 289
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEA 116
S T+++VGGL +VT++ +R F ++GEI VKI +G GF+ FA E A A
Sbjct: 4 SDQTSVYVGGLAYDVTEDLIRSTFEEFGEIDKVKIIQDHDGQSRGYGFITFATSEAANGA 63
Query: 117 LHKLNGTVIGKQSVRLSWGRN 137
++ +NG V+ +S+R++ +N
Sbjct: 64 IYGMNGKVVAGRSIRVNEVKN 84
>gi|398341593|ref|ZP_10526296.1| RNA recognition motif-containing protein [Leptospira inadai serovar
Lyme str. 10]
gi|398346075|ref|ZP_10530778.1| RNA recognition motif-containing protein [Leptospira broomii str.
5399]
Length = 86
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N +FVG L+ +V ++ + FS YGE+A VKI GKG GFV+ AN + AE A + LNGT
Sbjct: 3 NRKLFVGNLNYSVGHSEINELFSNYGEVAFVKIIEGKGFGFVEMANEQQAENAKNSLNGT 62
>gi|222622307|gb|EEE56439.1| hypothetical protein OsJ_05621 [Oryza sativa Japonica Group]
Length = 990
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G +GD T ++VG L P V + L + F ++G IASVKI + CGFV
Sbjct: 188 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 247
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
F NR + + A ++ G V+ ++L WG++ A
Sbjct: 248 AFMNRADGQAAKDEMEGVVVYDYELKLGWGKSVA 281
>gi|356561166|ref|XP_003548856.1| PREDICTED: uncharacterized protein LOC100819035 [Glycine max]
Length = 953
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 6/65 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVGGLD + T+EDLR+ F + GEI V++ KG FV+FAN+ENA++AL ++
Sbjct: 460 IFVGGLDRDATEEDLRKVFQRIGEIVEVRLHKNSSTNKNKGYAFVKFANKENAKKALSEM 519
Query: 121 NGTVI 125
VI
Sbjct: 520 KNPVI 524
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFV 105
P P E + ++F+ GL P+ ++ +R+ F YGEI + + K GFV
Sbjct: 623 PIHEPDPEIMAQVKSVFINGLPPHWDEDHVRELFKAYGEIVRIVLARNMSSAKRKDYGFV 682
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRL 132
F+ E A + +N + +G + ++
Sbjct: 683 DFSTHEAAVACVDGVNKSELGDGASKI 709
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +TD+ +RQ FS +G+I + KG FV+F+ E+A A+ +NGT
Sbjct: 220 NCTVYCGGIASGLTDQLMRQTFSPFGQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGT 279
Query: 124 VIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEYN 160
I V+ WG+ + ++ F+++EY+
Sbjct: 280 TIEGHVVKCYWGKETPD---------TTKDFQQVEYS 307
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGY 156
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 212
>gi|50252084|dbj|BAD28014.1| putative U2-associated SR140 protein [Oryza sativa Japonica Group]
Length = 954
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G +GD T ++VG L P V + L + F ++G IASVKI + CGFV
Sbjct: 168 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 227
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
F NR + + A ++ G V+ ++L WG++ A
Sbjct: 228 AFMNRADGQAAKDEMEGVVVYDYELKLGWGKSVA 261
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 49 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+S + IFVG L P + E LR+ F+ +GEI++ +I +G
Sbjct: 79 NWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQAS 144
FV F + AE A+ +NG +G +S+R +W + PA ++ S
Sbjct: 139 YAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRENS 183
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 63 SNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+NTT++ GG PN +TDE +++ F+Q+G I ++ KG F++FA++E+A A+ +
Sbjct: 204 TNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVFKDKGYAFIRFASKESAARAIEGTH 263
Query: 122 GTVIGKQSVRLSWGR 136
+ + V+ WG+
Sbjct: 264 NSEVQGHPVKCYWGK 278
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEAL 117
+S T++VG LD +VT+E L FSQ G + S KI F+++AN ++A+ AL
Sbjct: 4 ESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTAL 63
Query: 118 HKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKI 157
+N + K+ +R++W + N+ P T ++Q I
Sbjct: 64 AAMNKRMFLKKEIRVNWATSAGNQ-----PKTDTSQHHHI 98
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 118
I+VG L VTDEDLR F YGE++S K+ V KG GFV+ A++E+AE A+
Sbjct: 18 VNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAIK 77
Query: 119 KLNGTVIGKQSVRLSWGRNPANK 141
+++ + I + + ++ R P N+
Sbjct: 78 EMHDSDIKGRQIVVNEAR-PRNE 99
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSW 134
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 247 NTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQSDRGFAFVKLDTHEHAAMAIVQLQGQ 306
Query: 124 VIGKQSVRLSWGRNPANKQASLSPFTSSTQFKKIEYN 160
++ + ++ SWG++ A+ A +SP + S YN
Sbjct: 307 LVHGRPIKCSWGKDRADG-APISPGSMSPAPVAAPYN 342
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 120 LNGTVIGKQSVRLSW 134
LNG I +R++W
Sbjct: 78 LNGRKIFDTEIRVNW 92
>gi|324507276|gb|ADY43089.1| RNA-binding motif, single-stranded-interacting protein 1 [Ascaris
suum]
Length = 673
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 109
P S+ S+T +++ GLDPN TDEDLRQ QYG I S K + KG GFV F +
Sbjct: 291 PHSDAPLSSTNVYIRGLDPNTTDEDLRQKCDQYGVILSTKAIMDKATGQCKGYGFVDFES 350
Query: 110 RENAEEALHKLN 121
E A A+ LN
Sbjct: 351 AEAAMRAVEGLN 362
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANRE 111
Q E D +N ++ L N T++DL++ ++G + S +I +G GF + +E
Sbjct: 378 QQEQDPTN--LYFANLPANFTEQDLQKTLERFGMVISTRILKNQDGASRGVGFARMDKKE 435
Query: 112 NAEEALHKLNGTVI 125
++ + ++NG +I
Sbjct: 436 LCDQIIREMNGKLI 449
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 54 QGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQ 106
QG Q++ D+SN +FVG L P V DE L + F+ +G ++ ++ +G GF+
Sbjct: 125 QGTQNKEDTSNHYHVFVGDLSPEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLA 184
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWG 135
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 185 FRDKTDAEQAIATMNGEWLGSRAIRVNWA 213
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
S+ + NTT++VG L P T DL F G ++ +++ +G FV+ ENA A+
Sbjct: 264 SQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAAMAI 323
Query: 118 HKLNGTVIGKQSVRLSWG--RNPANKQASLSPFTSST 152
+L G ++ + ++ SWG R+ A+ A S T +T
Sbjct: 324 VQLQGQLVHGRPIKCSWGKDRSAADTGAPGSMITPAT 360
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G+ GFV++ + AE AL
Sbjct: 48 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEYMDMRAAETALQT 107
Query: 120 LNGTVIGKQSVRLSWG 135
LNG I +R++W
Sbjct: 108 LNGRKIFDTEIRVNWA 123
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC- 102
GG+ AP + + ++VGGLDP VTD+ LRQ F G + SVKI K
Sbjct: 65 GGFVRRAAP--------EPNKRALYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDKNAK 116
Query: 103 ----GFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
GFV++ + AE A+ LNG + + +R++W
Sbjct: 117 GFNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNW 152
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 112
E S + IFVG L V DE L+Q F+ +G I+ ++ +G GFV + R +
Sbjct: 162 EDTSHHFHIFVGDLSNEVNDELLQQAFTTFGTISEARVMWDMKTGRSRGYGFVAYRERSD 221
Query: 113 AEEALHKLNGTVIGKQSVRLSW 134
AE+AL ++G +G +++R +W
Sbjct: 222 AEKALSAMDGEWLGSRAIRCNW 243
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT++VG L P T DL F +G I + +G F++ ENA A+ +L+G
Sbjct: 294 TTVYVGNLTPYTTQNDLLPLFQNFGYIVETRFQADRGFAFIKMDTHENAAMAICQLSGYN 353
Query: 125 IGKQSVRLSWGRN---------------PANKQASLSPFTSSTQF 154
+ + ++ SWG++ P Q SPF++ Q+
Sbjct: 354 VNGRPLKCSWGKDRPPTGQFDGYSPQGGPQTPQFPNSPFSNFPQY 398
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 15/112 (13%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC- 102
GGY AP + + ++VGGLDP VT++ LRQ F G + SVKI K
Sbjct: 79 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSK 130
Query: 103 ----GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
GFV++ + AE A+ LNG + + +R++W N ANK+ + + F
Sbjct: 131 GLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHF 182
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 112
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 176 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 235
Query: 113 AEEALHKLNGTVIGKQSVRLSW 134
AE+AL ++G +G +++R +W
Sbjct: 236 AEKALSSMDGEWLGSRAIRCNW 257
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T DL F +G + + +G FV+ ENA A+ +LNG
Sbjct: 308 TTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN 367
Query: 125 IGKQSVRLSWGRN-PANKQASLSP 147
+ + ++ SWG++ P Q SP
Sbjct: 368 VNGRPLKCSWGKDRPPTGQFDYSP 391
>gi|170059381|ref|XP_001865339.1| pre-mRNA-splicing factor RBM22 [Culex quinquefasciatus]
gi|167878167|gb|EDS41550.1| pre-mRNA-splicing factor RBM22 [Culex quinquefasciatus]
Length = 428
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VG L ++T+ D+R F YGEI SV + + C FVQ+ R AE A K
Sbjct: 229 DKTITTLYVGNLGEHITEVDIRDNFYHYGEIRSVSLVPRQQCAFVQYTKRSAAELAAEKT 288
Query: 120 LNGTVIGKQSVRLSWGRNPANKQA 143
N V+G + + + W + A A
Sbjct: 289 FNKLVLGGKKLTIKWAHSQAKSTA 312
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
S + IFVG L P++T E L+ F +GEI+ K+ KG GFV F + +A+
Sbjct: 105 SQHHHIFVGDLSPDITTETLKNVFVPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQT 164
Query: 116 ALHKLNGTVIGKQSVRLSW-GRNP 138
A+ ++NG +G +++R +W R P
Sbjct: 165 AIEQMNGQWLGSRAIRTNWAARKP 188
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GGL N + +RQ FS +G I ++ KG FV+F N+E+A A+ L+G+
Sbjct: 215 NFTVYCGGL-INSDENIIRQTFSPFGRILEIRYFRDKGYAFVRFDNKESACNAIVALHGS 273
Query: 124 VIGKQSVRLSWGR 136
+ QSV+ SWG+
Sbjct: 274 NVQGQSVKCSWGK 286
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSW 134
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 229 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 288
Query: 124 VIGKQSVRLSWGRNPANKQASLS 146
++ + ++ SWG++ A+ A LS
Sbjct: 289 MVHGRPIKCSWGKDRADGTAPLS 311
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 120 LNGTVIGKQSVRLSW 134
LNG I +R++W
Sbjct: 78 LNGRKIFDTEIRVNW 92
>gi|301110582|ref|XP_002904371.1| U2-associated splicing factor, putative [Phytophthora infestans
T30-4]
gi|262096497|gb|EEY54549.1| U2-associated splicing factor, putative [Phytophthora infestans
T30-4]
Length = 907
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCG 103
+G GD T ++VG L P VT+E L+ F +YGE+ SVKI + CG
Sbjct: 168 AKGSFDNGDPETTNLYVGNLAPTVTEEVLQAEFGRYGEVYSVKIMWPRSEEERARKRNCG 227
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
FV F R +A++A L+ + Q + + WG+
Sbjct: 228 FVSFYERRDADDARVNLDNKQLEGQPMIVGWGK 260
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 110
Q + SS+ +FVG L P +T +D++ F +G+I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPA 139
+AE A+ ++ G +G + +R +W R PA
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPA 176
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G I +++ KG FV+F + E A A+ +NG
Sbjct: 201 SNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFVRFNSHEAAAHAIVSVNG 260
Query: 123 TVIGKQSVRLSWGR 136
T I V+ WG+
Sbjct: 261 TTIEGYVVKCYWGK 274
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 115
D T++VG L +VT+ + + F Q G S K+ V C FV+F +A
Sbjct: 3 DEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHATA 61
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
+ +NG I + V+++W P +++ S
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPTSQKKDTS 92
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NT ++VG L V +EDLR F YGEI +K G GFV + + A +A+ +
Sbjct: 189 DPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGGYGFVTYRDHSAAVQAIVGM 248
Query: 121 NGTVIGKQSVRLSWGR 136
NG + + V+ SWGR
Sbjct: 249 NGKELKGKMVKCSWGR 264
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQF 107
Q ++E +S++ IFVG L +V D L Q F GE + ++ KG GFV F
Sbjct: 83 QKEKTENTASHSHIFVGNLSGDVADPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSF 142
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
+E AE+AL +++G +G+ +R W +
Sbjct: 143 RTKEAAEKALAEMDGAQVGQWKIRCGWAHH 172
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALHKL 120
++VG L P V + L+ FS G ++ V+I + G FV+F + + A AL +
Sbjct: 7 LYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKTI 66
Query: 121 NGTVIGKQSVRLSW 134
NG ++ + VR+ W
Sbjct: 67 NGRILYNKEVRIQW 80
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 231 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 290
Query: 124 VIGKQSVRLSWGRNPAN-----KQASLSPFTSSTQFKKI 157
++ + ++ SWG++ A+ + A++SP T++T + +
Sbjct: 291 MVHGRPIKCSWGKDRADGTAAAQPAAMSPTTTATPYASM 329
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+S + +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSW 134
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGC 102
G P + P+ ++VG L P VT+ L + F+ G + VKI G
Sbjct: 7 GGPAEAPR------RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNY 60
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
GFV++ + +AE AL LNG I +R++W
Sbjct: 61 GFVEYMDMRSAETALQTLNGRKIFDTEIRVNW 92
>gi|302801073|ref|XP_002982293.1| hypothetical protein SELMODRAFT_116086 [Selaginella moellendorffii]
gi|300149885|gb|EFJ16538.1| hypothetical protein SELMODRAFT_116086 [Selaginella moellendorffii]
Length = 884
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFA 108
+GD T ++VG L P V + L + F ++G IASVKI + CGFV F
Sbjct: 186 DDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFM 245
Query: 109 NRENAEEALHKLNGTVIGKQSVRLSWGR 136
NR A+ A ++ G V+ + +R+ WG+
Sbjct: 246 NRGEAQAAKDEMQGVVVYEYELRIGWGK 273
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 14 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 73
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKIEYN 160
GFV F N+ +AE A+ ++ G +G + +R +W R P A S + S+T K++ Y+
Sbjct: 74 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP---APKSTYESNT--KQLSYD 127
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
FV F + AE A++ +NG +G +S+R +W
Sbjct: 139 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 171
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ +N T++ GG +TDE +++ FS +G I +++ KG F++F +E A A+
Sbjct: 199 NQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAI 258
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I V+ WG+
Sbjct: 259 ESTHNTEINGSIVKCFWGK 277
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S+ T++VG LD +V+++ L FSQ G + KI P FV+F N + A AL
Sbjct: 4 ESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++++W +P N+
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 187 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 246
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+NGT I V+ WG+
Sbjct: 247 VSVNGTTIEGHIVKCYWGK 265
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 78 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 137
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
+AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 138 WDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYEANTKQLSYDEV 185
>gi|302765607|ref|XP_002966224.1| hypothetical protein SELMODRAFT_85327 [Selaginella moellendorffii]
gi|300165644|gb|EFJ32251.1| hypothetical protein SELMODRAFT_85327 [Selaginella moellendorffii]
Length = 873
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFA 108
+GD T ++VG L P V + L + F ++G IASVKI + CGFV F
Sbjct: 186 DDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFM 245
Query: 109 NRENAEEALHKLNGTVIGKQSVRLSWGR 136
NR A+ A ++ G V+ + +R+ WG+
Sbjct: 246 NRGEAQAAKDEMQGVVVYEYELRIGWGK 273
>gi|218190187|gb|EEC72614.1| hypothetical protein OsI_06097 [Oryza sativa Indica Group]
Length = 997
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G +GD T ++VG L P V + L + F ++G IASVKI + CGFV
Sbjct: 195 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 254
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
F NR + + A ++ G V+ ++L WG++ A
Sbjct: 255 AFMNRADGQAAKDEMEGVVVYDYELKLGWGKSVA 288
>gi|340369158|ref|XP_003383115.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Amphimedon queenslandica]
Length = 854
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 52 PG--QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGK 100
PG +G D T ++VG ++P +T+E L Q F ++G +ASVKI K
Sbjct: 197 PGLPKGSIDSVDPLTTNLYVGNINPKMTEEMLCQHFGKFGPLASVKIMWPRTEEEKSRNK 256
Query: 101 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
CGFV + R +AE+AL G+ I V++ WG++
Sbjct: 257 NCGFVAYMKRPDAEKALDATKGSSIMGYEVQIGWGKS 293
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 194
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+
Sbjct: 196 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVR 244
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|66802614|ref|XP_635179.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
gi|60463492|gb|EAL61677.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
Length = 463
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D +NT I+V LD + + L+ F YGEI+ +K+ K FV F NRE+AE A L
Sbjct: 209 DPNNTAIYVSQLDHYIDEGVLQTIFGAYGEISYIKMLTNKFSAFVNFVNRESAEAAF-GL 267
Query: 121 NGTVIGKQSVRLSWGRNPA 139
N +G +++ WG+N A
Sbjct: 268 NNFPVGNTRLKVQWGKNVA 286
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIP------VGKGCGFVQFANRENAEE 115
S+ ++++G L +VTD+ L F +Y + S ++ + +G GFV+FA+ ++
Sbjct: 111 SDLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDK 170
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPA----NKQASLSPFTSSTQ 153
AL +NG I + ++++ NP N Q S P +ST
Sbjct: 171 ALIDMNGFYINNKPIKVN---NPTHKRLNSQTSTIPDLTSTD 209
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 146
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ ++ G +G + +R +W R P +++ T + ++
Sbjct: 147 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEV 202
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 106
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+
Sbjct: 204 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVR 252
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 11 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 70
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 71 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 100
>gi|297808057|ref|XP_002871912.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297317749|gb|EFH48171.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 335
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKL 120
+++VGGL ++T+E +R+ FS YG I +VKI GK GFV F+NR +A++A+ +
Sbjct: 8 SVYVGGLPYDITEEAVRRVFSIYGTILTVKIVNDRSVRGKCYGFVTFSNRRSADDAIEDM 67
Query: 121 NGTVIGKQSVRLS 133
+G IG ++VR++
Sbjct: 68 DGKSIGGRAVRVN 80
>gi|195353012|ref|XP_002043004.1| GM16370 [Drosophila sechellia]
gi|194127069|gb|EDW49112.1| GM16370 [Drosophila sechellia]
Length = 504
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 167 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 226
Query: 121 NGTVIGKQSVRLSWG--RNPANKQASLSPFT 149
NG +G +S+R +W + PANK+ ++ P T
Sbjct: 227 NGQWLGSRSIRTNWATRKPPANKE-NIKPLT 256
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 263 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 322
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 323 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 352
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 119
I+VG L +T+ +LR FS+YGE+AS I V K G GFV N +AE+A+
Sbjct: 2 NIYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEA 61
Query: 120 LNGTVIGKQSVRLSWGRNPANKQA 143
LNG+ + +S++++ R +N ++
Sbjct: 62 LNGSQLDGRSLKVNEARPRSNDRS 85
>gi|390361169|ref|XP_003729862.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
[Strongylocentrotus purpuratus]
Length = 483
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL-HK 119
D TT++VGGL VT+EDL+ F Q+GE+ S+ + + C FV F NR+ AE A +
Sbjct: 228 DRMITTLYVGGLGDKVTEEDLKGHFYQFGELRSINVVPKQQCAFVTFTNRQGAEXAAENS 287
Query: 120 LNGTVIGKQSVRLSWGR 136
+I + + + WG+
Sbjct: 288 FQKLIIXGRMLNIKWGK 304
>gi|168040006|ref|XP_001772487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676284|gb|EDQ62769.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL-HK 119
D S T++VGGL VT+EDL+ YGEI S+++ + C FV + RE AEEA H
Sbjct: 214 DMSIKTLYVGGLIDRVTEEDLKVQSYSYGEIESIRMVRQRACAFVTYTTREGAEEAADHL 273
Query: 120 LNGTVIGKQSVRLSW 134
N VI +RL W
Sbjct: 274 ANKLVIN--GLRLKW 286
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ ++A A+ +NGT
Sbjct: 203 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 262
Query: 124 VIGKQSVRLSWGRNPANKQASLSPFTSSTQFKK--IEYN 160
VI V+ WG+ + Q + + + + K +EYN
Sbjct: 263 VIEGNLVKCFWGKESPDMQKNSQQVSVTDKGTKERVEYN 301
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGC 102
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 80 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 139
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
GFV F N+ +AE A+ K+ G + + +R +W + PA K
Sbjct: 140 GFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPK 180
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
+S + T++VG L +VT+ + Q FSQ G S K+ FV+F + ++A A
Sbjct: 4 ESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAASA 63
Query: 117 LHKLNGTVIGKQSVRLSWGRNPA 139
+N I + V+++W +P+
Sbjct: 64 RATMNKRKILGKEVKVNWATSPS 86
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
GFV F N+ +AE A+ ++ G +G + +R +W + PA K
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK 179
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 108
S+ SN T++ GG+ +T++ +RQ FS +G+I +++ KG F++ A
Sbjct: 196 SQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPDKGYSFIRQA 246
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ LRQ F G + SVKI
Sbjct: 79 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQ 130
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
G GFV++ + AE A+ LNG + + +R++W N ANK+ + + F
Sbjct: 131 SKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHF 184
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------G 99
Y SN A E S++ IFVG L V DE L Q FS +G ++ ++
Sbjct: 170 YQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRS 224
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
+G GFV F R +AE+AL ++G +G +++R +W
Sbjct: 225 RGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNW 259
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T DL F +G + + +G FV+ ENA A+ +LNG
Sbjct: 310 TTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN 369
Query: 125 IGKQSVRLSWGRN-PANKQASLSP 147
+ + ++ SWG++ P Q SP
Sbjct: 370 VNGRPLKCSWGKDRPPTGQFDYSP 393
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ +N T++ GGL +++E +++ FS YG I +++ KG FV+FA +E+A A+
Sbjct: 157 NQASPTNCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKDKGYAFVRFATKESATHAI 216
Query: 118 HKLNGTVIGKQSVRLSWGR---NPANKQ 142
++ T + Q V+ SWG+ +P N+Q
Sbjct: 217 VAVHNTDVNGQIVKCSWGKESSDPNNQQ 244
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 120
IFVG L +V + LR+ F+ +GEI+ ++ KG GFV F +++AE A++ +
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 121 NGTVIGKQSVRLSWG-RNPAN 140
NG +G + +R +W R PA+
Sbjct: 110 NGQWLGGRVIRTNWATRRPAS 130
>gi|21553602|gb|AAM62695.1| glycine-rich RNA-binding protein-like [Arabidopsis thaliana]
Length = 337
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKL 120
+++VGGL ++T+E +R+ FS YG + +VKI GK GFV F+NR +A++A+ +
Sbjct: 8 SVYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSVRGKCYGFVTFSNRRSADDAIEDM 67
Query: 121 NGTVIGKQSVRLS 133
+G IG ++VR++
Sbjct: 68 DGKSIGGRAVRVN 80
>gi|50252085|dbj|BAD28015.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
Length = 589
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G +GD T ++VG L P V + L + F ++G IASVKI + CGFV
Sbjct: 127 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 186
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
F NR + + A ++ G V+ ++L WG++ A
Sbjct: 187 AFMNRADGQAAKDEMEGVVVYDYELKLGWGKSVA 220
>gi|357517325|ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
gi|355522973|gb|AET03427.1| U2-associated protein SR140 [Medicago truncatula]
Length = 1139
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G +GD T ++VG L P V + L + F ++G IASVKI + CGFV
Sbjct: 206 GSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 265
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
F NR + + A ++ G V+ + +++ WG++ A
Sbjct: 266 AFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVA 299
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L+P +T ED+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGY 139
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
GFV F N+ +AE A+ ++G +G + +R +W + PA K
Sbjct: 140 GFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPAPK 180
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +++ +RQ FS +G+I V++ KG F++F++ ++A A+ +NGT
Sbjct: 203 NCTVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVFPEKGYSFIRFSSHDSAAHAIVSVNGT 262
Query: 124 VIGKQSVRLSWGR 136
VI V+ WG+
Sbjct: 263 VIEGHVVKCFWGK 275
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLN 121
T++VG L +VT+ + Q F+Q G S K+ FV+F +A AL +N
Sbjct: 9 TLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAAALAAMN 68
Query: 122 GTVIGKQSVRLSWGRNPANKQASLS 146
G I + V+++W P++++ S
Sbjct: 69 GRKILGKEVKVNWATTPSSQKKDTS 93
>gi|195110887|ref|XP_002000011.1| GI22766 [Drosophila mojavensis]
gi|193916605|gb|EDW15472.1| GI22766 [Drosophila mojavensis]
Length = 387
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 47 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 106
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 107 NGQWLGSRSIRTNWATRKPPASKENIKPLT 136
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 143 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 202
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 203 AIVGVHNTEINAQPVKCSWGKESGDPNNSQ 232
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
+AE A+ ++ G +G + +R +W + PA K
Sbjct: 147 WDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK 179
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 70 GGLDPNVTDED-----------LRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
G L P V DE +RQ FS +G+I +++ KG FV+F++ E+A A+
Sbjct: 187 GPLSPRVPDEAVQSVLPAPEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIV 246
Query: 119 KLNGTVIGKQSVRLSWGRNPAN 140
+NGT I V+ WG+ A+
Sbjct: 247 SVNGTTIEGHVVKCYWGKETAD 268
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q FSQ G + K+ + FV+F+ +A A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFSEHRHAAAA 62
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P++++ S
Sbjct: 63 LAAMNGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|18420085|ref|NP_568388.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260444|gb|AAM13120.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
gi|28059296|gb|AAO30045.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
gi|332005391|gb|AED92774.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 337
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKL 120
+++VGGL ++T+E +R+ FS YG + +VKI GK GFV F+NR +A++A+ +
Sbjct: 8 SVYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSVRGKCYGFVTFSNRRSADDAIEDM 67
Query: 121 NGTVIGKQSVRLS 133
+G IG ++VR++
Sbjct: 68 DGKSIGGRAVRVN 80
>gi|340386570|ref|XP_003391781.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like,
partial [Amphimedon queenslandica]
Length = 271
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANRE 111
D T ++VG ++P +T+E L Q F ++G +ASVKI K CGFV + R
Sbjct: 70 DPLTTNLYVGNINPKMTEEMLCQHFGKFGPLASVKIMWPRTEEEKSRNKNCGFVAYMKRP 129
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRN 137
+AE+AL G+ I V++ WG++
Sbjct: 130 DAEKALDATKGSSIMGYEVQIGWGKS 155
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
+ +N T++ GGL +TDE +++ F+ +G I +++ KG FV+FA +E+A A+
Sbjct: 162 QSSPTNCTVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKESATHAIV 221
Query: 119 KLNGTVIGKQSVRLSWGR 136
++ + I Q V+ SWG+
Sbjct: 222 AVHNSDINGQPVKCSWGK 239
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 64 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAESAIAAM 123
Query: 121 NGTVIGKQSVRLSWG-RNP 138
NG +G +S+R +W R P
Sbjct: 124 NGQWLGSRSIRTNWATRKP 142
>gi|302808804|ref|XP_002986096.1| hypothetical protein SELMODRAFT_425040 [Selaginella moellendorffii]
gi|300146244|gb|EFJ12915.1| hypothetical protein SELMODRAFT_425040 [Selaginella moellendorffii]
Length = 398
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 120
D++ T++VGGLD VT EDL+ F YG+I S+++ + C F+ + RE+AE+A L
Sbjct: 95 DATVRTLYVGGLDERVTTEDLKDNFYSYGKIESLRLVPQRACAFITYTTREDAEKAAEDL 154
Query: 121 N 121
+
Sbjct: 155 S 155
>gi|158292281|ref|XP_313808.4| AGAP004509-PA [Anopheles gambiae str. PEST]
gi|347972043|ref|XP_003436831.1| AGAP004509-PB [Anopheles gambiae str. PEST]
gi|157017362|gb|EAA09240.4| AGAP004509-PA [Anopheles gambiae str. PEST]
gi|333469145|gb|EGK97189.1| AGAP004509-PB [Anopheles gambiae str. PEST]
Length = 441
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VG L ++T+ D+R F YGEI SV + + C FVQ+ R AE A K
Sbjct: 229 DKTITTLYVGNLGEHITEVDIRDNFYHYGEIRSVSLVPRQQCAFVQYTKRAAAELAAEKT 288
Query: 120 LNGTVIGKQSVRLSWGRNPANKQA 143
N V+G + + + W + A A
Sbjct: 289 FNKLVLGGKKLTIKWAHSQAKSTA 312
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 63/105 (60%), Gaps = 11/105 (10%)
Query: 54 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D++ + +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 90 QGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTMSDARVMWDMNSGKSRGYGFLA 149
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTSS 151
F ++ +AE+A+ +NG +G +++R++W AN++ +P T++
Sbjct: 150 FRDKTDAEQAIATMNGEWLGSRAIRVNW----ANQKTQGAPPTTT 190
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N+T++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 229 NSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 288
Query: 124 VIGKQSVRLSWGRNPAN 140
++ + ++ SWG++ A+
Sbjct: 289 MVHGRPIKCSWGKDRAD 305
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 72
Query: 120 LNGTVIGKQSVRLSW 134
LNG I +R++W
Sbjct: 73 LNGRKIFDTEIRVNW 87
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGC 102
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 104 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 163
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
GFV F N+ +AE A+ K+ G + + +R +W + PA K
Sbjct: 164 GFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPK 204
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ ++A A+ +NGT
Sbjct: 227 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 286
Query: 124 VIGKQSVRLSWGRNPANKQ 142
VI V+ WG+ + Q
Sbjct: 287 VIEGNLVKCFWGKESPDMQ 305
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEA 116
S +++ LD +V DE L++ FS+YG + S K+ P G +G GFV ++N E A A
Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGLSRGFGFVAYSNPEEALRA 388
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASL 145
L ++NG +IGK+ + ++ + +++A L
Sbjct: 389 LSEMNGKMIGKKPLYIALAQRKEDRRAHL 417
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
IF+ LD ++ ++ L + FS +G I S K+ + KG GFVQF E+A+ A+ KLN
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 122 GTVIGKQSV 130
G ++ + V
Sbjct: 198 GMLMNDKQV 206
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 52 PGQGPQSEGDSS--NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGF 104
P P + D + N++++ G LDP VT+ L F + SV++ + G +
Sbjct: 34 PAPSPAAVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAY 93
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 141
+ F+N +A A+ LN T + ++ +R+ R+P+ +
Sbjct: 94 INFSNPNDAYRAMEALNYTPLFERPIRIMLSNRDPSTR 131
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHK 119
T ++V L + +++LR+ F ++G I+S + + GFV F E A A+ K
Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEK 288
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASL 145
+NG +G + + + + ++ L
Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEEL 314
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
FV F + AE A++ +NG +G +S+R +W
Sbjct: 139 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 171
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ +N T++ GG +TDE +++ FS +G I +++ KG F++F +E A A+
Sbjct: 199 NQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAI 258
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I V+ WG+
Sbjct: 259 ESTHNTEINGSIVKCFWGK 277
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S+ T++VG LD +V+++ L FSQ G + KI P FV+F N ++A AL
Sbjct: 4 ESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAATAL 63
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++++W +P N+
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|195503598|ref|XP_002098718.1| GE23777 [Drosophila yakuba]
gi|194184819|gb|EDW98430.1| GE23777 [Drosophila yakuba]
Length = 543
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 213 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 272
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 273 NGQWLGSRSIRTNWATRKPPASKENIKPLT 302
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
++ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 308 NQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAAT 367
Query: 115 EALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 368 HAIVGVHNTEINAQPVKCSWGKESGDPNNAQ 398
>gi|384500196|gb|EIE90687.1| hypothetical protein RO3G_15398 [Rhizopus delemar RA 99-880]
Length = 213
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEA 116
S+TTI+ G L + + D+ F +YG + S+ +P+ KG FV+F +R++AE+A
Sbjct: 136 SSTTIYAGNLPYDFIERDVATMFERYGRLKSITVPLDTVTNKNKGFAFVEFEDRQDAEDA 195
Query: 117 LHKLNGTVIGKQSVRLSW 134
K +G + + +RL W
Sbjct: 196 FEKFDGFSVEGRRLRLDW 213
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 70 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 129
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFK 155
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+
Sbjct: 130 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFE 183
>gi|406606542|emb|CCH42041.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
[Wickerhamomyces ciferrii]
Length = 482
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEEAL 117
SN ++VGGLD ++++ LR+ FSQ+GEI +VKI K F++F N NA A
Sbjct: 100 SNKILYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKNKQNFNYAFIEFQNELNASNAF 159
Query: 118 HKLNGTVIGKQSVRLSWG 135
+LN + + ++W
Sbjct: 160 QELNNKTLQNSVISINWA 177
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 54 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQF 107
Q Q++ S + IFVG L + DE L+ F++Y + + +G GFV F
Sbjct: 179 QSQQAKNSSEHFNIFVGDLSTEIDDEQLKAAFNEYKSLVQAHVMWDMQSGRSRGYGFVSF 238
Query: 108 ANRENAEEALHKLNGTVIGKQSVRLSWG 135
N+++AE AL G+ IG + VRL+W
Sbjct: 239 TNQQDAELALTTKQGSQIGNRQVRLNWA 266
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT+++G L P T DL +G I +K K C F+++ + E A A+ +L+G +
Sbjct: 391 TTVYLGNLTPYTTQNDLIPLVQNFGYIVDLKFHQEKNCAFIKYDSHERAALAIVQLSGLI 450
Query: 125 IGKQSVRLSWGRNPAN 140
I + ++ WG++ N
Sbjct: 451 INGRPLKTGWGKDRIN 466
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L+P+++ ED+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGY 139
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P ++ + +F+++
Sbjct: 140 GFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSLQDSVSKQLRFEEV 195
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +++ +RQ FS +G+I +++ KG F++F++ ++A A+ +NGT
Sbjct: 203 NCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGT 262
Query: 124 VIGKQSVRLSWGR 136
I +V+ WG+
Sbjct: 263 SIEGHAVKCYWGK 275
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 114
+ +S T++VG L +VT+ + Q F+Q G S K+ FV+F +A
Sbjct: 2 DDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 115 EALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
AL +NG I + V+++W P++++ S
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQKKDTS 93
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 78 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFT 129
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
G GFV+F + AE A+ LNG I + +R++W
Sbjct: 130 TKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNW 167
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 58 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 110
S+ D+SN IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 175 SKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 234
Query: 111 ENAEEALHKLNGTVIGKQSVRLSW 134
A++AL+ ++G +G +++R +W
Sbjct: 235 AEADKALNSMDGEWLGSRAIRCNW 258
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T DL F +G + ++ +G FV+ + ENA A+ +LNG
Sbjct: 309 TTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYN 368
Query: 125 IGKQSVRLSWGR---------NPANKQASLSPFTSS 151
+ + ++ SWG+ N + +Q + +PF S
Sbjct: 369 VNGRPLKCSWGKDRPPTGQFDNFSPQQGNTAPFNGS 404
>gi|357147169|ref|XP_003574244.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Brachypodium distachyon]
Length = 949
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 52 PGQGPQS--EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGK 100
PG+ P S +GD T ++VG L P V + L + F ++G IASVKI +
Sbjct: 158 PGRLPGSFDDGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQR 217
Query: 101 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
CGFV F NR + A ++ G V+ +++ WG++ A
Sbjct: 218 NCGFVAFMNRAEGQAAKDEMQGVVVYDYELKIGWGKSVA 256
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D++N +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSW 134
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 244 NTTVYVGNLVPYCTQADLIPLFQTIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 303
Query: 124 VIGKQSVRLSWGRN 137
++ + ++ SWG++
Sbjct: 304 MVHGRPIKCSWGKD 317
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQT 77
Query: 120 LNGTVIGKQSVRLSW 134
LNG I +R++W
Sbjct: 78 LNGRRIFDTEIRVNW 92
>gi|442621497|ref|NP_001263033.1| CG34362, isoform F [Drosophila melanogaster]
gi|440217979|gb|AGB96413.1| CG34362, isoform F [Drosophila melanogaster]
Length = 498
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLT 257
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 264 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 323
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 324 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 353
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 121
+++ LD +TD+ LR+ FS +G+I S KI V KG GFV F+ RE A +AL ++N
Sbjct: 406 LYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMN 465
Query: 122 GTVIGKQSVRLSWGRNPANKQASL 145
G +I + + +++ + ++A L
Sbjct: 466 GKMISGKPLYVAFAQRKEERKAML 489
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 116
S + IF+ LD + ++ L FS +G I S K+ + KG GFVQ+ E+A+ A
Sbjct: 207 SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSA 266
Query: 117 LHKLNGTVIGKQSV 130
+ LNG +I + V
Sbjct: 267 MKSLNGMLINDKPV 280
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
T+++VG L+ NVTD L + FSQ G++ SV++ G +V ++N +A A+
Sbjct: 121 TTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAM 180
Query: 118 HKLNGTVIGKQSVRLSWG-RNPANKQA 143
LN + + +R+ + R+P+++++
Sbjct: 181 EALNFAPLNNKPIRVMYSNRDPSSRRS 207
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLN 121
+FV L + T EDL + FS+YG I S + +G + GFV F + ++A A+ +LN
Sbjct: 303 VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELN 362
Query: 122 GTVI 125
G I
Sbjct: 363 GKKI 366
>gi|195574475|ref|XP_002105214.1| GD21364 [Drosophila simulans]
gi|194201141|gb|EDX14717.1| GD21364 [Drosophila simulans]
Length = 496
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKENIKPLT 255
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 262 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 321
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 322 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 351
>gi|194907035|ref|XP_001981474.1| GG11588 [Drosophila erecta]
gi|190656112|gb|EDV53344.1| GG11588 [Drosophila erecta]
Length = 502
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 172 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 231
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 232 NGQWLGSRSIRTNWATRKPPASKENIKPLT 261
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 268 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 327
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 328 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 357
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKL 120
+F+GGL + + L+ FSQ+G I VK+ PV KG GFV+FA+ + A ALHK+
Sbjct: 39 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 98
Query: 121 NGTVIGKQSVRLSW 134
G VI +++R+ +
Sbjct: 99 GGEVIDGRNIRVHY 112
>gi|157128887|ref|XP_001661533.1| RNA binding motif protein [Aedes aegypti]
gi|108872461|gb|EAT36686.1| AAEL011251-PA [Aedes aegypti]
Length = 429
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VG L ++T+ D+R F YGEI SV + + C FVQ+ R AE A K
Sbjct: 229 DKTITTLYVGNLGEHLTEVDIRDNFYHYGEIRSVSLVPRQQCAFVQYTKRAAAELAAEKT 288
Query: 120 LNGTVIGKQSVRLSWGRNPANKQA 143
N V+G + + + W + A A
Sbjct: 289 FNKLVLGGKKLTIKWAHSQAKSTA 312
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALH 118
N ++V LD N+ D+ L + FS +G I S K+ KG GFV FAN E A A+
Sbjct: 295 NVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVT 354
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
+NGT+IG + + ++ + +++A L
Sbjct: 355 DMNGTIIGSKPLYVALAQRKEDRRAKL 381
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N++++VG L P V+D L+ FS+ G + S ++ G G+V F + ++AE+AL
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 118 HKLNGTVIGKQSVRLSWG-RNPANKQA 143
LN + + +R+ W R+P+ +++
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPSLRKS 98
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
IF+ LD ++ ++L FS +G I S KI + KG GFV F E AE A+ K+N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 122 GTVIGKQSV 130
+I + V
Sbjct: 163 NMIIRDRVV 171
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
+++ P +E L++ F+++GEI S + KG GFV F + ++AE A+ ++
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 122 GTVI 125
G I
Sbjct: 254 GKEI 257
>gi|395645925|ref|ZP_10433785.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395442665|gb|EJG07422.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
+ ++VG L +VT++ L + FSQYG++ SVKI KG GFV+ + E AE+A LN T
Sbjct: 3 TSRLYVGNLTYSVTEKQLEELFSQYGDVKSVKIIGDKGFGFVEMGSPEEAEKAKEALNET 62
Query: 124 VIGKQSVRLSWGRNP 138
V +++R+ + P
Sbjct: 63 VFVGRTLRIDEAQPP 77
>gi|339243331|ref|XP_003377591.1| paraspeckle component 1 [Trichinella spiralis]
gi|316973596|gb|EFV57164.1| paraspeckle component 1 [Trichinella spiralis]
Length = 461
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
S +F+G L + T+E+LR+ FS++GE++ I KG FV+ ANR +AE A KL+
Sbjct: 54 SGRARLFIGNLPQDTTEEELRELFSKFGELSECFIS-RKGFAFVRMANRPSAERAKEKLD 112
Query: 122 GTVIGKQSVRLSWGRNPAN-KQASLSPFTSS 151
G V + +R+ + N A + LSP S+
Sbjct: 113 GFVFKGRPLRIRFAANAAALRVKELSPLVSN 143
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
FV F + AE A+ +NG +G +S+R +W
Sbjct: 139 YAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNW 171
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ +N T++ GG +TD+ + + FS +G I +++ KG F++F +E A A+
Sbjct: 199 NQSSPTNCTVYCGGFTNGITDDLITKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAI 258
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I V+ WG+
Sbjct: 259 ESTHNTEINGSIVKCFWGK 277
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S+ T++VG LD +V++E L FSQ G + KI P FV+F N + A AL
Sbjct: 4 ESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++++W +P N+
Sbjct: 64 AAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Query: 46 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---G 99
+A+N +P P+ G S +I+ G LD + +EDL+ F +GEI ++K+ PV
Sbjct: 91 WATN-SPNGMPKVIGTS--VSIYCGNLDDTIDEEDLKAAFEVFGEILNIKVVRDPVTNHS 147
Query: 100 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
K F+ F N+ +AE+A+ +++G ++ ++++ +W N++
Sbjct: 148 KNIAFISFTNKPDAEKAIREMHGAMLKTRAIKTNWATRNQNQK 190
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 121
+ NTT++ GG+ N T+E +R F YG+I V+I K F++F NA A+ K N
Sbjct: 205 ADNTTVYAGGIPSNCTEEQIRSHFDDYGKIVDVRIFAAKNYAFIKFDTHANAATAICKSN 264
Query: 122 GT 123
GT
Sbjct: 265 GT 266
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTD----EDLRQPFSQYGE-IASVKIPVG-----KGCGFV 105
P D++ T ++VG LD VTD LR E + S + G +G FV
Sbjct: 3 PSDVPDANATVLYVGNLDKRVTDTMMINILRTGLPHIKEKVLSASMFPGDMNNPEGYCFV 62
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 140
QF + +A ++++ LNG + V+++W N N
Sbjct: 63 QFEDNISAMQSMNFLNGREFCGKKVKVNWATNSPN 97
>gi|442621493|ref|NP_001163754.2| CG34362, isoform D, partial [Drosophila melanogaster]
gi|440217977|gb|ACZ95048.2| CG34362, isoform D, partial [Drosophila melanogaster]
Length = 799
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 462 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 521
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 522 NGQWLGSRSIRTNWATRKPPASKENIKPLT 551
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 558 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 617
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 618 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 647
>gi|198451107|ref|XP_002137227.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
gi|198131338|gb|EDY67785.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
Length = 503
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 174 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 233
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 234 NGQWLGSRSIRTNWATRKPPASKENIKPLT 263
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
++ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 269 NQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAAT 328
Query: 115 EALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T + Q V+ SWG+ +P N Q
Sbjct: 329 HAIVGVHNTELNAQPVKCSWGKESGDPNNAQ 359
>gi|195143945|ref|XP_002012957.1| GL23648 [Drosophila persimilis]
gi|194101900|gb|EDW23943.1| GL23648 [Drosophila persimilis]
Length = 503
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 174 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 233
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 234 NGQWLGSRSIRTNWATRKPPASKENIKPLT 263
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
++ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 269 NQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAAT 328
Query: 115 EALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T + Q V+ SWG+ +P N Q
Sbjct: 329 HAIVGVHNTELNAQPVKCSWGKESGDPNNAQ 359
>gi|340372441|ref|XP_003384752.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Amphimedon
queenslandica]
Length = 412
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D S T++++GGL ++++ DLR F Q+GEI + + + C F+ F R AE+A+ +
Sbjct: 228 DKSITSLYIGGLSDDISERDLRDHFYQFGEIEDINVIHKQNCAFITFTTRPAAEKAVEQT 287
Query: 120 LNGTVIGKQSVRLSWGRN 137
+ +I +++ WGR+
Sbjct: 288 FSKLIIKGNRLKVLWGRS 305
>gi|196010826|ref|XP_002115277.1| hypothetical protein TRIADDRAFT_64182 [Trichoplax adhaerens]
gi|190582048|gb|EDV22122.1| hypothetical protein TRIADDRAFT_64182 [Trichoplax adhaerens]
Length = 432
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 116
Q +G ++ IF+GGL P +++++LR FS +GE+ +K KG GFV F N E+ + A
Sbjct: 309 QRDGQQTDYQIFIGGLTPEISEKELRNEFSVFGEVKHIKTNTSKGFGFVSFENEESVKRA 368
Query: 117 LHKLNGTVIGKQSVRL 132
L +GK + +
Sbjct: 369 LTTELKIFVGKTQINI 384
>gi|108383479|gb|ABF85732.1| IP09238p [Drosophila melanogaster]
Length = 791
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 454 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 513
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 514 NGQWLGSRSIRTNWATRKPPASKENIKPLT 543
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 550 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 609
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 610 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 639
>gi|24650782|ref|NP_651609.1| CG34362, isoform A [Drosophila melanogaster]
gi|21464374|gb|AAM51990.1| RE10833p [Drosophila melanogaster]
gi|23172487|gb|AAF56774.2| CG34362, isoform A [Drosophila melanogaster]
gi|220947934|gb|ACL86510.1| CG34362-PA [synthetic construct]
gi|220957166|gb|ACL91126.1| CG34362-PA [synthetic construct]
Length = 505
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLT 257
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 264 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 323
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 324 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 353
>gi|195055815|ref|XP_001994808.1| GH17439 [Drosophila grimshawi]
gi|193892571|gb|EDV91437.1| GH17439 [Drosophila grimshawi]
Length = 520
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 180 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 239
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 240 NGQWLGSRSIRTNWATRKPPASKENIKPLT 269
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 276 QSSPSNCTVYVGGVNSALTALSEEILQKTFALYGAIQEIRVFKDKGYAFVRFSTKEAATH 335
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 336 AIVGVHNTEINAQPVKCSWGKESGDPNNSQ 365
>gi|452820224|gb|EME27269.1| RNA-binding protein [Galdieria sulphuraria]
Length = 998
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 14 REERTLLYKLCFHRNSSYCQFNIVFLLVLIGGYASNGAPGQGPQSEGDSS---NTTIFVG 70
RE LL K+ FH Y + + F+L A N +G S ++ N T+ V
Sbjct: 552 REAVNLLPKVSFH--GRYLE--VRFILSSETSPALNEPMKKGIHSTNSATHFNNGTLVVF 607
Query: 71 GLDPNVTDEDLRQPFSQYGEIASVK-IPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 129
LD N+T ++LR+ F +YG+I ++ P K F++F + +AE ALHKLN T + +
Sbjct: 608 NLDSNITADELRKVFGEYGDIKEIRESPHKKHHKFIEFYDVRDAEVALHKLNKTEVSGKK 667
Query: 130 VRLSWGR 136
+++ R
Sbjct: 668 IKIEISR 674
>gi|442621495|ref|NP_001263032.1| CG34362, isoform E [Drosophila melanogaster]
gi|440217978|gb|AGB96412.1| CG34362, isoform E [Drosophila melanogaster]
Length = 509
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLT 257
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 264 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 323
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 324 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 353
>gi|428166035|gb|EKX35018.1| translation initiation factor 3, subunit G [Guillardia theta
CCMP2712]
Length = 351
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFA 108
GPQ E T+ V + + T ED+ + F Q+G IA V +P G+G F+ F
Sbjct: 189 GPQEE---EKATLRVTNVSTDATREDMHELFKQFGPIARVSVPTDRATGEGRGFAFIDFY 245
Query: 109 NRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
NRE+A+ A++ LNGT + + W R A
Sbjct: 246 NREDAQRAINALNGTGFDSLILNVDWARPSA 276
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 231 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 290
Query: 124 VIGKQSVRLSWGRNPAN-----KQASLSPFTSSTQFKKI 157
++ + ++ SWG++ A+ + A++SP T++T + +
Sbjct: 291 MVHGRPIKCSWGKDRADGTAAAQPAAMSPTTTATPYASM 329
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+S + +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSW 134
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G GFV++ + +AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQT 77
Query: 120 LNGTVIGKQSVRLSW 134
LNG I +R++W
Sbjct: 78 LNGRKIFDTEIRVNW 92
>gi|194746386|ref|XP_001955661.1| GF18875 [Drosophila ananassae]
gi|190628698|gb|EDV44222.1| GF18875 [Drosophila ananassae]
Length = 495
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKENIKPLT 255
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 58 SEGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 114
++ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 261 NQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAAT 320
Query: 115 EALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 321 HAIVGVHNTEINAQPVKCSWGKESGDPNNAQ 351
>gi|442621490|ref|NP_001097951.2| CG34362, isoform B, partial [Drosophila melanogaster]
gi|440217976|gb|AAF56772.4| CG34362, isoform B, partial [Drosophila melanogaster]
Length = 792
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 462 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 521
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 522 NGQWLGSRSIRTNWATRKPPASKENIKPLT 551
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 558 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 617
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T I Q V+ SWG+ +P N Q
Sbjct: 618 AIVGVHNTEINAQPVKCSWGKESGDPNNAQ 647
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALH 118
N ++V LD N+ D+ L + FS +G I S K+ KG GFV FAN E A A+
Sbjct: 295 NVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVT 354
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
+NGT+IG + + ++ + +++A L
Sbjct: 355 DMNGTIIGSKPLYVALAQRKEDRRAKL 381
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N++++VG L P V+D L+ FS+ G + S ++ G G+V F + ++AE+AL
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 118 HKLNGTVIGKQSVRLSWG-RNPA 139
LN + + +R+ W R+P+
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPS 94
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
IF+ LD ++ ++L FS +G I S KI + KG GFV F E AE A+ K+N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 122 GTVIGKQSV 130
+I + V
Sbjct: 163 NMIIRDRVV 171
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIAS---VKIPVGK--GCGFVQFANRENAEEALHKLN 121
+++ P +E L++ F+++GEI S +K GK G GFV F + ++AE A+ ++
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 122 GTVI 125
G I
Sbjct: 254 GKEI 257
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALH 118
N ++V LD N+ D+ L + FS +G I S K+ KG GFV FAN E A A+
Sbjct: 295 NVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVT 354
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
+NGT+IG + + ++ + +++A L
Sbjct: 355 DMNGTIIGSKPLYVALAQRKEDRRAKL 381
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N++++VG L P V+D L+ FS+ G + S ++ G G+V F + ++AE+AL
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 118 HKLNGTVIGKQSVRLSWG-RNPA 139
LN + + +R+ W R+P+
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPS 94
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
IF+ LD ++ ++L FS +G I S KI + KG GFV F E AE A+ K+N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 122 GTVIGKQSV 130
+I + V
Sbjct: 163 NMIIRDRVV 171
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIAS---VKIPVGK--GCGFVQFANRENAEEALHKLN 121
+++ P +E L++ F+++GEI S +K GK G GFV F + ++AE A+ ++
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 122 GTVI 125
G I
Sbjct: 254 GKEI 257
>gi|50408254|ref|XP_456766.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
gi|49652430|emb|CAG84729.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
Length = 463
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANRENAEEAL 117
SN ++VGGL +V+DE L+ F+ G I SVKI G F++F N ++A+ AL
Sbjct: 96 SNKILYVGGLHKSVSDEMLKDLFAVAGAIQSVKILNDKNRPGFNYAFIEFENTQSADMAL 155
Query: 118 HKLNGTVIGKQSVRLSWG 135
H LNG +I ++++W
Sbjct: 156 HTLNGRIINNSEIKINWA 173
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAE 114
D IFVG L P V DE L + FS++ + + +G GFV F + +AE
Sbjct: 185 DEPTFNIFVGDLSPEVDDETLNKSFSKFPSLKQAHVMWDMQTSRSRGYGFVSFGQQADAE 244
Query: 115 EALHKLNGTVIGKQSVRLSWG 135
AL +NG I +++R +W
Sbjct: 245 LALQTMNGEWISGRAIRCNWA 265
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 52 PGQGPQS------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 105
P PQS + S TT+++G + DL +G I K +GC FV
Sbjct: 347 PVMSPQSYDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNFGFIVDFKFHPERGCAFV 406
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 137
++ + E A A+ +L G I + ++ WG++
Sbjct: 407 KYDSHERAALAIVQLAGFTINGRPLKCGWGKD 438
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ LRQ F G + SVKI
Sbjct: 79 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQ 130
Query: 97 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQASLSPF 148
G GFV++ + AE A+ LNG + + +R++W N ANK+ + + F
Sbjct: 131 SKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHF 184
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 112
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 237
Query: 113 AEEALHKLNGTVIGKQSVRLSW 134
AE+AL ++G +G +++R +W
Sbjct: 238 AEKALSSMDGEWLGSRAIRCNW 259
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T DL F +G + + +G FV+ ENA A+ +LNG
Sbjct: 310 TTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYN 369
Query: 125 IGKQSVRLSWGRN-PANKQASLSP 147
+ + ++ SWG++ P Q SP
Sbjct: 370 VNGRPLKCSWGKDRPPTGQFDYSP 393
>gi|449668538|ref|XP_004206808.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Hydra magnipapillata]
Length = 407
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 105
G + GD + T +FV L+P + +E L + F +YG +ASVKI + CGFV
Sbjct: 194 GSKDNGDPTTTNLFVSNLNPKMNEEQLCKIFGKYGPLASVKIMWPRTEDEKSRNRNCGFV 253
Query: 106 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
F R++ E+ L + G + +++ WG+
Sbjct: 254 AFMVRKDGEKCLADIEGKDVMDYEMKIGWGK 284
>gi|195391718|ref|XP_002054507.1| GJ22768 [Drosophila virilis]
gi|194152593|gb|EDW68027.1| GJ22768 [Drosophila virilis]
Length = 504
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 173 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 232
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 233 NGQWLGSRSIRTNWATRKPPASKENIKPLT 262
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 269 QSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATH 328
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQASLS 146
A+ ++ T I Q V+ SWG+ +P N Q+ S
Sbjct: 329 AIVGVHNTEINAQPVKCSWGKESGDPNNSQSMAS 362
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGY 156
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F +
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFDDV 212
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 47/79 (59%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ + N T++ GG+ +T++ +RQ F +G+I +++ KG F++F+ ++A A+
Sbjct: 214 NQSTAKNCTVYCGGIGSGLTEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAI 273
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+NGT I V+ WG+
Sbjct: 274 VSVNGTTIEGHVVKCYWGK 292
>gi|256081432|ref|XP_002576974.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645373|emb|CCD59902.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 392
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALHKL 120
IFVGG+DP VT++ +R+ FS +G++ S+ +P G FV F+ A++A+ K
Sbjct: 148 IFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAAKKAISKE 207
Query: 121 NGTVIGKQ-SVRLSWGRNPANKQASL 145
+ G+Q VR++ R+ AN+Q +L
Sbjct: 208 RQDIFGRQCDVRVAVTRDQANRQKAL 233
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 135 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 194
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 195 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 250
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 47/79 (59%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ S N T++ GG+ ++++ +RQ F +G+I +++ KG F++F+ ++A A+
Sbjct: 252 NQSSSKNCTVYCGGIGAGLSEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAI 311
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+NGT I V+ WG+
Sbjct: 312 VSVNGTTIEGHVVKCYWGK 330
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI----------------AS 93
G+P G E D T++VG L +VT+ + Q FSQ G AS
Sbjct: 32 GSP-TGCDMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGAS 90
Query: 94 VKIPVGKGCG-----FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
V PV FV+F +A AL +NG I + V+++W P++++ S
Sbjct: 91 VSFPVMPNANNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTS 148
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 11/101 (10%)
Query: 54 QGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+SN +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 65 QGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 124
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSP 147
F ++ +AE+A+ +NG +G +++R++W AN++ +P
Sbjct: 125 FRDKTDAEQAIATMNGEWLGSRAIRVNW----ANQKTQGAP 161
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 198 NTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 257
Query: 124 VIGKQSVRLSWGRN----PANKQASLSPFTSSTQFKKI 157
++ + ++ SWG++ A SLSP ++ + +
Sbjct: 258 MVHGRPIKCSWGKDRDSGAALSSGSLSPTPTAAPYANV 295
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGC 102
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 82 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 141
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
GFV F N+ +AE A+ K+ G + + +R +W + PA K
Sbjct: 142 GFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPK 182
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ ++A A+ +NGT
Sbjct: 205 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 264
Query: 124 VIGKQSVRLSWGRNPANKQ 142
VI V+ WG+ + Q
Sbjct: 265 VIEGNLVKCFWGKESPDMQ 283
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
+S + T++VG L +VT+ + Q FSQ G S K+ FV+F + ++A A
Sbjct: 6 ESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAASA 65
Query: 117 LHKLNGTVIGKQSVRLSWGRNPA 139
+N I + V+++W +P+
Sbjct: 66 RATMNKRKILGKEVKVNWATSPS 88
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 115
D+ T ++V LDP +T+E L++ FS++G+I SV I +G GFV F N ++A
Sbjct: 188 DAKYTNLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFENPDDARW 247
Query: 116 ALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
A+ ++NGT +G + + + + A ++ L
Sbjct: 248 AMERMNGTELGSKVLYVGRAQKRAEREQIL 277
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 119
+ ++V +D +VTDE+LR+ FSQ G I S K+ KG GFV F++ E A +A++
Sbjct: 295 SNVYVKNIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNT 354
Query: 120 LNGTVIGKQSVRLS 133
+G + ++ + ++
Sbjct: 355 FHGYMFHRKPLYVA 368
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
++V L ++ + L++ F ++G + S K+ KG GFVQF + ++A A+ KLN
Sbjct: 103 VYVKNLSESIDNVGLQELFGEFGTVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLN 162
Query: 122 GTVIGKQSV 130
G+++G + +
Sbjct: 163 GSIVGDKQI 171
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFAN 109
P + ++ +++VG L +V+D L FS++ +ASV++ G+ G+V F +
Sbjct: 4 PSTISATATASLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNFIS 63
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWG-RNP 138
E+A A+ N T + + +R+ W R+P
Sbjct: 64 PEDAIRAIETKNHTPLNGKLMRVMWSHRDP 93
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 49 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 101
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKG 138
Query: 102 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
FV F + AE A+ +NG +G +S+R +W
Sbjct: 139 YAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNW 171
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
++ +N T++ GG +TDE + + FS +G I +++ KG F++F +E A A+
Sbjct: 199 NQSSPTNCTVYCGGFTNGITDELINKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAI 258
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ T I V+ WG+
Sbjct: 259 ESTHNTEINGSIVKCFWGK 277
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S+ T++VG LD +V++E L FSQ G + KI P FV+F N + A AL
Sbjct: 4 ESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++++W +P N+
Sbjct: 64 AAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 49 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 102
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 156
Query: 103 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQASLSPFTSSTQFKKI 157
GFV F N+ +AE A+ + G +G + +R +W R P +++ T +F+ +
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 212
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
N T++ GG+ +T++ +RQ F +G+I +++ KG F++F+ ++A A+ +NGT
Sbjct: 220 NCTVYCGGIGSGLTEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGT 279
Query: 124 VIGKQSVRLSWGR 136
I V+ WG+
Sbjct: 280 TIEGHVVKCYWGK 292
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKL 120
+F+GGL + + L+ FSQ+G I VK+ PV KG GFV+FA+ + A ALHK+
Sbjct: 126 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 185
Query: 121 NGTVIGKQSVRLSWG 135
G VI +++R+ +
Sbjct: 186 GGEVIDGRNIRVHYA 200
>gi|18420875|ref|NP_568464.1| U2-associated protein SR140 [Arabidopsis thaliana]
gi|13430600|gb|AAK25922.1|AF360212_1 unknown protein [Arabidopsis thaliana]
gi|14532872|gb|AAK64118.1| unknown protein [Arabidopsis thaliana]
gi|332006012|gb|AED93395.1| U2-associated protein SR140 [Arabidopsis thaliana]
Length = 946
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 42 LIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-- 99
L + +G PG +GD T ++VG L P V + L + F ++G IASVKI
Sbjct: 158 LPDDFDPSGRPGSF--DDGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRT 215
Query: 100 -------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR + + A ++ G ++ + +++ WG+
Sbjct: 216 DEEKRRQRNCGFVSFMNRADGQAAKDEMQGIIVYEYELKIGWGK 259
>gi|348667370|gb|EGZ07195.1| hypothetical protein PHYSODRAFT_528320 [Phytophthora sojae]
Length = 791
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 50 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGK 100
A +G GD T ++VG L P VT+E L + F +YG++ SVKI +
Sbjct: 195 AAMTKGSFDTGDPETTNLYVGNLAPTVTEEVLEKEFGRYGDVYSVKIMWPRSEEERARRR 254
Query: 101 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
CGFV F R +A++A L+ + Q + + WG+
Sbjct: 255 NCGFVSFYERRDADDARVNLDNKELEGQPIIVGWGK 290
>gi|297812707|ref|XP_002874237.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320074|gb|EFH50496.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 948
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 42 LIGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV--- 98
L + +G PG +GD T ++VG L P V + L + F ++G IASVKI
Sbjct: 158 LPDDFDPSGRPGSF--DDGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRT 215
Query: 99 ------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ CGFV F NR + + A ++ G ++ + +++ WG+
Sbjct: 216 DEEKRRQRNCGFVSFMNRADGQAAKDEMQGIIVYEYELKIGWGK 259
>gi|291234161|ref|XP_002737018.1| PREDICTED: RNA binding motif protein 16-like [Saccoglossus
kowalevskii]
Length = 1381
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
+TTIF+G L ++D+++ F ++G+I S+ I +GC FV R+++ +AL KL
Sbjct: 509 STTIFLGHLAKATGEKDIKEIFEEFGQIQSIDIIPPRGCAFVCMEQRQDSHKALQKLKNL 568
Query: 124 VIGKQSVRLSWGRNPANKQASLSPFTSS 151
+ ++++SW N K A + S
Sbjct: 569 KLHGNTIKMSWATNKGTKGAEYKKYWDS 596
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEE 115
+ + T+F+G L N T + L + F QYGE+ S +IP KG G+VQ+ + E A+
Sbjct: 101 APSDTLFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGSIEEAKA 160
Query: 116 ALHKLNGTVIGKQSVRLSWG--RNPANKQ 142
AL LNG I + RL + R+PA+ Q
Sbjct: 161 ALEALNGEYIEGRPCRLDYSTPRDPASSQ 189
>gi|330812947|ref|XP_003291377.1| hypothetical protein DICPUDRAFT_38905 [Dictyostelium purpureum]
gi|325078437|gb|EGC32088.1| hypothetical protein DICPUDRAFT_38905 [Dictyostelium purpureum]
Length = 368
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 53 GQGPQSEGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
Q P+ D S TT+F+G LD + V +ED+R F YG + +K+ + C FV F R
Sbjct: 186 SQPPKKPSDESVTTLFLGNLDVDKVKEEDIRNNFFVYGTVKKIKMVPHQKCAFVTFDTRS 245
Query: 112 NAEEALHKL-NGTVIGKQSVRLSWGR 136
AE A+ L N I +++L+W +
Sbjct: 246 AAENAIDSLYNNFKIDDCNIKLNWSK 271
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHK 119
T+F+G L N +++ + FS++GEI SV+IP KG G+VQ+ N E+A++AL
Sbjct: 266 TLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDA 325
Query: 120 LNGTVIGKQSVRLSWG--RNPAN 140
L G I + VRL + R P N
Sbjct: 326 LQGEYIDNRPVRLDFSTPRPPQN 348
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 119
TIFVG L ++ DE L+ F G + ++ +G G+V F N+E AE+A+ +
Sbjct: 166 TIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKAVKE 225
Query: 120 LNGTVIGKQSV 130
++G I + +
Sbjct: 226 MHGKEIDGREI 236
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALH 118
N ++V LD N+ D+ L + FS +G I S K+ KG GFV FAN E A A+
Sbjct: 295 NVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVT 354
Query: 119 KLNGTVIGKQSVRLSWGRNPANKQASL 145
+NGT+IG + + ++ + +++A L
Sbjct: 355 DMNGTIIGSKPLYVALAQRKEDRRAKL 381
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 117
N++++VG L P V+D L+ FS+ G + S ++ G G+V F + ++AE+AL
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQAL 71
Query: 118 HKLNGTVIGKQSVRLSWG-RNPA 139
LN + + +R+ W R+P+
Sbjct: 72 EVLNYEPLMGRPIRIMWSQRDPS 94
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
IF+ LD ++ ++L FS +G I S KI + KG GFV F E AE A+ K+N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 122 GTVIGKQSV 130
+I + V
Sbjct: 163 NMIIRDRVV 171
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 121
++V P +E L++ FS++GEI S + KG GFV + + ++AE A+ ++
Sbjct: 194 LYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYLDPDHAENAVRTMH 253
Query: 122 GTVI 125
G I
Sbjct: 254 GKEI 257
>gi|270014670|gb|EFA11118.1| hypothetical protein TcasGA2_TC004718 [Tribolium castaneum]
Length = 350
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
++V GL N+T +DL FS YG I + +I + KG GF++F R AE A+ +L
Sbjct: 130 LYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQEL 189
Query: 121 NGTVI--GKQSVRLSWGRNPANKQASLSPFTS 150
NGT+ + + + + NP+N ++ P +
Sbjct: 190 NGTIPKGSTEPITVKFANNPSNNNKAIPPLAA 221
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----------------GCG 103
+ S T + V L +T E++R FS GE+ S K+ K G G
Sbjct: 27 EESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTVPGVITSPLLTGQSLGYG 86
Query: 104 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
FV + E+AE+A++ LNG + +++++S+ R
Sbjct: 87 FVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR 119
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 109
P + + S IFV L P + L Q F +G + SVK+ KG GFV N
Sbjct: 258 PGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTN 317
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRN 137
+ A A+ LNG +G + +++S+ N
Sbjct: 318 YDEAVVAIQSLNGYTLGNRVLQVSFKTN 345
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFA 108
GPQ+ + T + V L +T+E L+Q FSQ+G + S K+ + G GFV +
Sbjct: 14 GPQNPETKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYG 73
Query: 109 NRENAEEALHKLNGTVIGKQSVRLSWGR 136
+ E AE A+ K+NGT + +++++S+ R
Sbjct: 74 SAEEAEHAIQKMNGTTLESKTLKVSYAR 101
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEAL 117
N ++V L P ++ +L F YG I + K+ G+G GFV+F AE A+
Sbjct: 109 NANVYVANLPPQLSLTELDALFQPYGTIITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAI 168
Query: 118 HKLNG--TVIGKQSVRLSWGRNPANKQASLSPFTSS 151
LNG V G Q + + + AN + +P T +
Sbjct: 169 AALNGKQLVGGTQPLLVKF----ANPPKAATPLTGT 200
>gi|189233813|ref|XP_971256.2| PREDICTED: similar to RNA-binding protein, putative [Tribolium
castaneum]
Length = 352
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
++V GL N+T +DL FS YG I + +I + KG GF++F R AE A+ +L
Sbjct: 132 LYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQEL 191
Query: 121 NGTVI--GKQSVRLSWGRNPANKQASLSPFTS 150
NGT+ + + + + NP+N ++ P +
Sbjct: 192 NGTIPKGSTEPITVKFANNPSNNNKAIPPLAA 223
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-------------------- 100
+ S T + V L +T E++R FS GE+ S K+ K
Sbjct: 26 EESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGMKLPGVITSPLLTGQSL 85
Query: 101 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 136
G GFV + E+AE+A++ LNG + +++++S+ R
Sbjct: 86 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR 121
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 109
P + + S IFV L P + L Q F +G + SVK+ KG GFV N
Sbjct: 260 PGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTN 319
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRN 137
+ A A+ LNG +G + +++S+ N
Sbjct: 320 YDEAVVAIQSLNGYTLGNRVLQVSFKTN 347
>gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
Length = 379
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEA 116
S +++ LD +V DE L++ FS+YG + S K+ P G +G GFV ++N E A A
Sbjct: 48 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 107
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASL 145
L ++NG +IG++ + ++ + +++A L
Sbjct: 108 LSEMNGKMIGRKPLYIALAQRKEDRRAHL 136
>gi|356526679|ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Glycine max]
Length = 972
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 109
+GD T ++VG L P V + L + F ++G IASVKI + CGFV F N
Sbjct: 181 DGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN 240
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
R + + A ++ G V+ + +++ WG++ A
Sbjct: 241 RADGQAAKDEMQGVVVYEYELKIGWGKSVA 270
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 63 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 122
SN T++ GG+ +T++ +RQ FS +G+I V++ KG FV+F + E+A A+ +NG
Sbjct: 202 SNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNG 261
Query: 123 TVIGKQSVRLSWGRNPANKQASL 145
+ I V+ WG+ + S+
Sbjct: 262 SSIEGHIVKCYWGKETPDMMNSM 284
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 57 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 110
Q + S++ +FVG L P +T ED++ F +G I+ ++ KG GFV F N+
Sbjct: 88 QKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNK 147
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 141
+AE A+ + G +G + +R +W + PA K
Sbjct: 148 WDAENAIQHMGGQWLGGRQIRTNWATRKPPAPK 180
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEA 116
D T++VG L +VT+ + Q F+Q G S K+ V FV+F + +A +
Sbjct: 4 DDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAAS 63
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASLS 146
L +NG I + V+++W P +++ S
Sbjct: 64 LAAMNGRKIMGKEVKVNWATTPTSQKKDTS 93
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANREN 112
+ D T +++ LD ++T+E ++ FSQYG + SVKI KG GFV F N E+
Sbjct: 209 TNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPES 268
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
A+ A +NG ++G +++ ++ + A ++ L
Sbjct: 269 AKRAKESMNGMLLGSKTLYVARAQKKAERKQYL 301
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEALHK 119
++VG L +V +E L + F + G + SV++ G+V + ++ +A AL K
Sbjct: 39 ALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEK 98
Query: 120 LNGTVIGKQSVRLSWG-RNPANKQASL 145
LN ++I + +R+ W R+P +++ +
Sbjct: 99 LNHSLILDKPIRVMWSNRDPDARRSGV 125
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 121
+FV L+ V + L++ F ++G+I S K+ +G GFVQFA +E+A+ ++ LN
Sbjct: 128 VFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLN 187
Query: 122 GT 123
+
Sbjct: 188 NS 189
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEA 116
S+ + +++ ++ V D+ LR+ F+++G I S KI + KG GFV + E A+ A
Sbjct: 316 SNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCA 375
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASL 145
+ + G + + + ++ + ++A L
Sbjct: 376 VSNMRGVMFYGKPLYVAIAQRKEERRAKL 404
>gi|242060740|ref|XP_002451659.1| hypothetical protein SORBIDRAFT_04g005430 [Sorghum bicolor]
gi|241931490|gb|EES04635.1| hypothetical protein SORBIDRAFT_04g005430 [Sorghum bicolor]
Length = 389
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFA 108
+GD T ++VG L P V + L + F ++G IASVKI + CGFV F
Sbjct: 171 DDGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFM 230
Query: 109 NRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
NR + + A ++ G V+ +++ WG++ A +L
Sbjct: 231 NRTDGQAAKDEMQGVVVYDYELKIGWGKSVALPSQAL 267
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANREN 112
+ D T +++ LD ++T+E ++ FSQYG + SVKI KG GFV F N E+
Sbjct: 209 TNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPES 268
Query: 113 AEEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
A+ A +NG ++G +++ ++ + A ++ L
Sbjct: 269 AKRAKESMNGMLLGSKTLYVARAQKKAERKQYL 301
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEALHK 119
++VG L +V +E L + F + G + SV++ G+V + ++ +A AL K
Sbjct: 39 ALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEK 98
Query: 120 LNGTVIGKQSVRLSWG-RNPANKQASL 145
LN ++I + +R+ W R+P +++ +
Sbjct: 99 LNHSLILDKPIRVMWSNRDPDARRSGV 125
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 121
+FV L+ V + L++ F ++G+I S K+ +G GFVQFA +E+A+ ++ LN
Sbjct: 128 VFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLN 187
Query: 122 GT 123
+
Sbjct: 188 NS 189
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEA 116
S+ + +++ ++ V D+ LR+ F+++G I S KI + KG GFV + E A+ A
Sbjct: 316 SNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCA 375
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASL 145
+ + G + + + ++ + ++A L
Sbjct: 376 VSNMRGVMFYGKPLYVAIAQRKEERRAKL 404
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 51 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 104
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 105 VQFANRENAEEALHKLNGTVIGKQSVRLSW 134
V F + AE A+ +N I +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNRQWIASRSIRTNW 170
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 117
+ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 215 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAI 274
Query: 118 HKLNGTVIGKQSVRLSWGR 136
+ + + V+ WG+
Sbjct: 275 EHTHNSEVHGNLVKCFWGK 293
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 117
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 118 HKLNGTVIGKQSVRLSWGRNPANK 141
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|328874874|gb|EGG23239.1| hypothetical protein DFA_05371 [Dictyostelium fasciculatum]
Length = 1340
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 55 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----GCGFVQFANR 110
G + + SS T I++ L NV +EDLR+ F ++G I S+K+ K C +Q++
Sbjct: 531 GGRDQDTSSYTAIYIRALAKNVLEEDLRESFIKFGSIVSLKLIENKNNFPSCAIIQYSTN 590
Query: 111 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASLSPFTS 150
A EA ++G+V+ + +++SW +N K A L+P S
Sbjct: 591 PAAVEAKKAMDGSVLQGKELKISWAKNQIPK-ALLTPDNS 629
>gi|256081434|ref|XP_002576975.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645374|emb|CCD59903.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 380
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALHKL 120
IFVGG+DP VT++ +R+ FS +G++ S+ +P G FV F+ A++A+ K
Sbjct: 136 IFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAAKKAISKE 195
Query: 121 NGTVIGKQ-SVRLSWGRNPANKQASL 145
+ G+Q VR++ R+ AN+Q +L
Sbjct: 196 RQDIFGRQCDVRVAVTRDQANRQKAL 221
>gi|125777509|ref|XP_001359630.1| GA13140 [Drosophila pseudoobscura pseudoobscura]
gi|195156856|ref|XP_002019312.1| GL12337 [Drosophila persimilis]
gi|54639378|gb|EAL28780.1| GA13140 [Drosophila pseudoobscura pseudoobscura]
gi|194115903|gb|EDW37946.1| GL12337 [Drosophila persimilis]
Length = 422
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VG L +T+ +LR F QYGEI S+ + + C FVQ+ R AE A +
Sbjct: 228 DRNITTLYVGNLPEEITEPELRDQFYQYGEIRSIALVPRQQCAFVQYTKRSAAELAAERS 287
Query: 120 LNGTVIGKQSVRLSWGRNPANK 141
N VI + V + W + A +
Sbjct: 288 FNKLVIHGRKVSIKWAHSQAKQ 309
>gi|356560817|ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Glycine max]
Length = 971
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFA 108
+GD T ++VG L P V + L + F ++G IASVKI + CGFV F
Sbjct: 179 DDGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFM 238
Query: 109 NRENAEEALHKLNGTVIGKQSVRLSWGRNPA 139
NR + + A ++ G V+ + +++ WG++ A
Sbjct: 239 NRADGQAAKDEMQGVVVYEYELKIGWGKSVA 269
>gi|289741767|gb|ADD19631.1| putative RNA-binding protein [Glossina morsitans morsitans]
Length = 415
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 61 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 119
D + TT++VG L ++T+ +R F QYGEI S+ + + C FVQ+ R +E A K
Sbjct: 228 DRNITTLYVGNLPEDITEPMIRDNFYQYGEIRSIALVPRQQCAFVQYTKRSASELAAEKT 287
Query: 120 LNGTVIGKQSVRLSWGRNPANKQAS 144
N VIG + + W + A + +
Sbjct: 288 FNKLVIGGHKITIKWAHSQAKQSVA 312
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKL 120
+F+GGL + + L+ FSQ+G I VK+ PV KG GFV+FA+ + A ALHK+
Sbjct: 39 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 98
Query: 121 NGTVIGKQSVRLSW 134
G VI +++R+ +
Sbjct: 99 GGEVIDGRNIRVHY 112
>gi|291224888|ref|XP_002732434.1| PREDICTED: spen homolog, transcriptional regulator-like
[Saccoglossus kowalevskii]
Length = 3454
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 66 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEALHKLNG 122
T+F+G L+ N T DLR+ F +GEI + I G F+QFAN ++ ++L K++G
Sbjct: 400 TLFIGNLEKNTTYSDLREKFKAFGEIVDIDIKKQGGVPAYAFMQFANIKSVVKSLKKMDG 459
Query: 123 TVIGKQSVRLSWGRNPAN 140
IGK +L +G++ AN
Sbjct: 460 EPIGKNRFKLGFGKSMAN 477
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
T+I+VG + NV+ DL QPF ++G + VK +G FV+ ENA A+ L
Sbjct: 224 TSIYVGNIPLNVSQNDLVQPFQRFGYVQEVKFQADRGFAFVKMDTHENAANAIVHLQNMS 283
Query: 125 IGKQSVRLSWGRN 137
I +LSWG++
Sbjct: 284 INGNVTKLSWGKD 296
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 58 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFAN 109
+E + TTI+VG LD VTD L + F+ G++ SVKI + GFV+FA+
Sbjct: 11 AETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFAD 70
Query: 110 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQASL 145
AE+A+ +NG I +R +W + AN L
Sbjct: 71 PRVAEQAIQDMNGRKIFNYEIRANWAQPSANINPPL 106
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG---KGCGFVQFANREN 112
E +++ +FVG L + DE L Q FS++G ++ + P+ +G GFV F ++ +
Sbjct: 111 EDTTNHFHVFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTD 170
Query: 113 AEEALHKLNGTVIGKQSVRLSWG 135
AE A+ +NG +G + +R +W
Sbjct: 171 AERAIATMNGEWLGTRPIRCNWA 193
>gi|195449393|ref|XP_002072055.1| GK22641 [Drosophila willistoni]
gi|194168140|gb|EDW83041.1| GK22641 [Drosophila willistoni]
Length = 521
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 120
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 183 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 242
Query: 121 NGTVIGKQSVRLSWG-RNPANKQASLSPFT 149
NG +G +S+R +W R P + ++ P T
Sbjct: 243 NGQWLGSRSIRTNWATRKPPASKENVKPLT 272
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 59 EGDSSNTTIFVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
+ SN T++VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A
Sbjct: 279 QSSPSNCTVYVGGVNSALTALSEEILQKTFTPYGAIQEIRVFKDKGYAFVRFSTKEAATH 338
Query: 116 ALHKLNGTVIGKQSVRLSWGR---NPANKQ 142
A+ ++ T + Q V+ SWG+ +P N Q
Sbjct: 339 AIVGVHNTELNAQPVKCSWGKESGDPNNAQ 368
>gi|88603697|ref|YP_503875.1| RNA recognition motif-containing protein [Methanospirillum hungatei
JF-1]
gi|88189159|gb|ABD42156.1| RNA-binding region RNP-1 (RNA recognition motif) [Methanospirillum
hungatei JF-1]
Length = 105
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 126
++VG L +V ++ L+ FSQYG++ SVKI KG GFV+ E A+ A+ LN TV
Sbjct: 6 LYVGNLTYSVKEDQLKDLFSQYGDVVSVKIIEQKGFGFVEMGTSEEAQAAMDALNQTVFE 65
Query: 127 KQSVRLSWGR 136
+++R+ R
Sbjct: 66 GRTMRIDEAR 75
>gi|326431240|gb|EGD76810.1| pre-mRNA-splicing factor RBM22 [Salpingoeca sp. ATCC 50818]
Length = 336
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 61 DSSNTTIFVGGL--DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 118
D + TT++VGGL D + + D+R F Q+GEI + I K FV++ RE AE A+
Sbjct: 122 DKTITTLYVGGLREDYGINETDIRDVFYQHGEIQRITITPNKKNAFVEYTTREAAERAMS 181
Query: 119 KL-NGTVIGKQSVRLSWGRNPANKQ 142
+L N I +RL WGR A++
Sbjct: 182 ELHNSLCIKGHYLRLLWGRPKASQH 206
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 121
++VGGLDP VT++ LRQ F G + SVKI K GFV++ + AE A+ LN
Sbjct: 92 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNARGYNYGFVEYDDPGAAERAMQTLN 151
Query: 122 GTVIGKQSVRLSWG--RNPANKQASLSPF 148
G + + +R++W N ANK+ + + F
Sbjct: 152 GRRVHQSEIRVNWAYQSNNANKEDTSNHF 180
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 112
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 174 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 233
Query: 113 AEEALHKLNGTVIGKQSVRLSW 134
AE+AL ++G +G +++R +W
Sbjct: 234 AEKALSSMDGEWLGSRAIRCNW 255
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T D+ F +G + + +G FV+ ENA A+ +LNG
Sbjct: 306 TTCYVGNLTPYTTQNDIVPLFQNFGFVVESRFQADRGFAFVKMDTHENAAMAICQLNGYN 365
Query: 125 IGKQSVRLSWGRN--PANKQ 142
+ + ++ SWG++ PA+ Q
Sbjct: 366 VNGRPLKCSWGKDKTPAHHQ 385
>gi|308804982|ref|XP_003079803.1| RRM-containing RNA-binding protein-like (ISS) [Ostreococcus tauri]
gi|116058260|emb|CAL53449.1| RRM-containing RNA-binding protein-like (ISS) [Ostreococcus tauri]
Length = 380
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 61 DSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 119
D+S TT+F+G +DP V ++D+R F +YG+I S+++ K C F+ F +R AE+A
Sbjct: 227 DTSITTLFIGNVDPERVNEDDIRGRFYRYGDIKSIRVIGNKKCAFITFTSRAGAEKAAED 286
Query: 120 --LNGTVIGKQSVRLSWGR 136
N + G Q RL WG+
Sbjct: 287 AAFNLEINGVQ-CRLQWGK 304
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 78 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQ 129
Query: 97 --PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
G GFV+F + AE A+ LNG I + +R++W
Sbjct: 130 FTTKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNW 169
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 58 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 110
S+ D+SN IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 177 SKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 236
Query: 111 ENAEEALHKLNGTVIGKQSVRLSW 134
A++AL+ ++G +G +++R +W
Sbjct: 237 TEADKALNSMDGEWLGSRAIRCNW 260
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P T DL F +G + ++ +G FV+ + ENA A+ +LNG
Sbjct: 311 TTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYN 370
Query: 125 IGKQSVRLSWGRN 137
+ + ++ SWG++
Sbjct: 371 VNGRPLKCSWGKD 383
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEA 116
S +++ LD +V DE L++ FS+YG + S K+ P G +G GFV ++N E A A
Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 388
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASL 145
L ++NG +IG++ + ++ + +++A L
Sbjct: 389 LSEMNGKMIGRKPLYIALAQRKEDRRAHL 417
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
IF+ LD ++ ++ L + FS +G I S K+ + KG GFVQF E+A+ A+ KLN
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 122 GTVIGKQSV 130
G ++ + V
Sbjct: 198 GMLMNDKQV 206
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEEALH 118
N++++ G LDP VT+ L F + SV++ + G ++ F+N +A A+
Sbjct: 48 NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAME 107
Query: 119 KLNGTVIGKQSVRLSWG-RNPANK 141
LN T + + +R+ R+P+ +
Sbjct: 108 ALNYTPLFDRPIRIMLSNRDPSTR 131
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHK 119
T ++V L + +++LR+ F ++G I+S + + GFV F E A A+ K
Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEK 288
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASL 145
+NG +G + + + + ++ L
Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEEL 314
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEA 116
S +++ LD +V DE L++ FS+YG + S K+ P G +G GFV ++N E A A
Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 388
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASL 145
L ++NG +IG++ + ++ + +++A L
Sbjct: 389 LSEMNGKMIGRKPLYIALAQRKEDRRAHL 417
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
IF+ LD ++ ++ L + FS +G I S K+ + KG GFVQF E+A+ A+ KLN
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 122 GTVIGKQSV 130
G ++ + V
Sbjct: 198 GMLMNDKQV 206
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEEALH 118
N++++ G LDP VT+ L F + SV++ + G ++ F+N +A A+
Sbjct: 48 NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAME 107
Query: 119 KLNGTVIGKQSVRLSWG-RNPANK 141
LN T + + +R+ R+P+ +
Sbjct: 108 ALNYTPLFDRPIRIMLSNRDPSTR 131
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHK 119
T ++V L + +++LR+ F ++G I+S + + GFV F E A A+ K
Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEK 288
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASL 145
+NG +G + + + + ++ L
Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEEL 314
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 54 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 106
QG Q++ D+S + +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 107 FANRENAEEALHKLNGTVIGKQSVRLSW 134
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 123
NTT++VG L P T DL F G ++ +++ +G FV+ E+A +A+ +L G
Sbjct: 228 NTTVYVGNLVPYTTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAQAIVQLQGQ 287
Query: 124 VIGKQSVRLSWGRNPAN 140
++ + ++ SWG++ A+
Sbjct: 288 MVHGRPIKCSWGKDRAD 304
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 119
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 120 LNGTVIGKQSVRLSW 134
LNG I +R++W
Sbjct: 78 LNGRKIFDTEIRVNW 92
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 18/110 (16%)
Query: 43 IGGYASNGAPGQGPQSEGDSSN-----------TTIFVGGLDPNVTDEDLRQPFSQYGEI 91
+ G S AP G S G +S+ ++VGGLDP VT++ L+Q F G +
Sbjct: 49 VAGALSASAPSAGILSPGSASSFARRAAPEPNKRALYVGGLDPRVTEDVLKQIFETTGHV 108
Query: 92 ASVKI-------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
SVKI G GFV++ + + AE A+ LNG + +Q +R++W
Sbjct: 109 QSVKIIPDKNFQSKGYNYGFVEYDDPQCAERAMQTLNGRRVHQQEIRVNW 158
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 58 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 110
S+ D+SN IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 166 SKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVSFRDR 225
Query: 111 ENAEEALHKLNGTVIGKQSVRLSW 134
+AE+AL ++G +G +++R +W
Sbjct: 226 GDAEKALSSMDGEWLGSRAIRCNW 249
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 30 SYCQFNIVFLLVLIGGYASNGAPGQGPQS------EGDSSNTTIFVGGLDPNVTDEDLRQ 83
S Q + + Y + P QG QS + TT +VG L P T DL
Sbjct: 259 SQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQNDLVP 318
Query: 84 PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN------ 137
F +G + + +G FV+ ENA A+ +L+G + + ++ SWG++
Sbjct: 319 LFQNFGYVTETRFHSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGKDRPPTGQ 378
Query: 138 -----PANKQASLSPFTSSTQFKK 156
PA Q++ P T T F +
Sbjct: 379 FDGYSPAPPQSAFPP-TPQTYFPQ 401
>gi|390177341|ref|XP_003736348.1| GA27045, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859003|gb|EIM52421.1| GA27045, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 483
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 52 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
P + P + S ++V L +VT+E L++ F QYG++ VK K F+ F +R+
Sbjct: 330 PQEEPDEQTMSKVKVLYVRNLTQDVTEEKLKEQFEQYGKVERVK--KIKDYAFIHFEDRD 387
Query: 112 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 142
+A EA+ LNG IG ++ +S + P++K+
Sbjct: 388 SAVEAMRGLNGKEIGASNIEVSLAKPPSDKK 418
>gi|313240136|emb|CBY32488.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 14/117 (11%)
Query: 56 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 111
P+ E S +T +FVGGL +T E +RQ F ++GE+ V IP GK F++ NR
Sbjct: 102 PEKEEGSQESTGQSRLFVGGLPEAITQEQVRQMFQKFGEVKEVYIPQGKTFAFIKMTNRM 161
Query: 112 NAEEALHKLNGTVIGKQS--VRLSWGRNPANKQA-SLSPFTSS-------TQFKKIE 158
A++A + L+G I Q+ +R+ + + + +LSP S+ ++F KIE
Sbjct: 162 QADQAKYGLSGKTIAGQNRPIRVKFAAQGTSVEVKNLSPLISNERLYDAFSRFGKIE 218
>gi|452820260|gb|EME27305.1| pre-mRNA-splicing factor RBM22/SLT11 [Galdieria sulphuraria]
Length = 366
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 56 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 115
P+ D T+FVGG+ V+ E++ Q F +YGEI ++K+ K F++F R AE
Sbjct: 230 PEPPTDPKAKTLFVGGVGSLVSYEEIAQLFEKYGEIENIKVIREKSIAFIEFKERIAAER 289
Query: 116 ALHKLNGTV-IGKQSVRLSWGR 136
+ L G V +G Q V L+W +
Sbjct: 290 TMETLYGKVHLGGQKVFLNWAK 311
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 62 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEA 116
S +++ LD +V DE L++ FS+YG + S K+ P G +G GFV ++N E A A
Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 388
Query: 117 LHKLNGTVIGKQSVRLSWGRNPANKQASL 145
L ++NG +IG++ + ++ + +++A L
Sbjct: 389 LSEMNGKMIGRKPLYIALAQRKEDRRAHL 417
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 121
IF+ LD ++ ++ L + FS +G I S K+ + KG GFVQF E+A+ A+ KLN
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 122 GTVIGKQSV 130
G ++ + V
Sbjct: 198 GMLMNDKQV 206
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 64 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEEALH 118
N++++ G LDP VT+ L F + SV++ + G ++ F+N +A A+
Sbjct: 48 NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAME 107
Query: 119 KLNGTVIGKQSVRLSWG-RNPANK 141
LN T + + +R+ R+P+ +
Sbjct: 108 ALNYTPLFDRPIRIMLSNRDPSTR 131
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHK 119
T ++V L + +++LR+ F ++G I+S + + GFV F E A A+ K
Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEK 288
Query: 120 LNGTVIGKQSVRLSWGRNPANKQASL 145
+NG +G + + + + ++ L
Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEEL 314
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 67 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 120
I+VG L VTDE+LR F YGE++S K+ V KG GFV+ A +E+AE A+ ++
Sbjct: 3 IYVGNLSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMARQEDAETAIKEM 62
Query: 121 NGTVIGKQSVRLSWGRNPANK 141
N + + + + ++ R P N+
Sbjct: 63 NDSDLKGRQIVVNQAR-PRNE 82
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 44 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 96
GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 78 GGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKF 129
Query: 97 -PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 134
G GFV+F + AE A+ LNG I + +R++W
Sbjct: 130 NSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNW 168
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 59 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 112
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 113 AEEALHKLNGTVIGKQSVRLSW 134
AE+AL ++G +G +++R +W
Sbjct: 238 AEKALSSMDGEWLGSRAIRCNW 259
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 65 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 124
TT +VG L P + DL F +G + ++ +G F++ + ENA A+ +LNG
Sbjct: 310 TTCYVGNLTPYTSQNDLVPLFQNFGFVLETRLQADRGFAFIKMDSHENAAMAICQLNGYN 369
Query: 125 IGKQSVRLSWG--RNPANK------QASLSPFTSS 151
+ + ++ SWG R P + Q SPF SS
Sbjct: 370 VNGRPLKCSWGKDRPPTGQFDNFPGQQGNSPFNSS 404
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,610,243,273
Number of Sequences: 23463169
Number of extensions: 105055988
Number of successful extensions: 295855
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5507
Number of HSP's successfully gapped in prelim test: 18109
Number of HSP's that attempted gapping in prelim test: 260884
Number of HSP's gapped (non-prelim): 40323
length of query: 161
length of database: 8,064,228,071
effective HSP length: 123
effective length of query: 38
effective length of database: 9,473,225,580
effective search space: 359982572040
effective search space used: 359982572040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)