BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031315
         (161 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2QJG|A Chain A, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|B Chain B, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|C Chain C, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|D Chain D, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|E Chain E, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|K Chain K, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|L Chain L, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|M Chain M, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|N Chain N, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|O Chain O, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|F Chain F, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|G Chain G, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|H Chain H, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|I Chain I, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|J Chain J, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|P Chain P, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|Q Chain Q, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|R Chain R, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|S Chain S, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJG|T Chain T, M. Jannaschii Adh Synthase Complexed With F1,6p
 pdb|2QJH|A Chain A, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|B Chain B, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|C Chain C, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|D Chain D, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|E Chain E, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|F Chain F, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|G Chain G, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|H Chain H, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|I Chain I, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|J Chain J, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|K Chain K, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|L Chain L, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|M Chain M, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|N Chain N, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|O Chain O, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|P Chain P, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|Q Chain Q, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|R Chain R, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|S Chain S, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJH|T Chain T, M. Jannaschii Adh Synthase Covalently Bound To
           Dihydroxyacetone Phosphate
 pdb|2QJI|A Chain A, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|B Chain B, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|C Chain C, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|D Chain D, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|E Chain E, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|F Chain F, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|G Chain G, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|H Chain H, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|I Chain I, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|J Chain J, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|K Chain K, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|L Chain L, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|M Chain M, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|N Chain N, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|O Chain O, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|P Chain P, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|Q Chain Q, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|R Chain R, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|S Chain S, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
 pdb|2QJI|T Chain T, M. Jannaschii Adh Synthase Complexed With Dihydroxyacetone
           Phosphate And Glycerol
          Length = 273

 Score = 26.2 bits (56), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 72  FLEELERTVALLAFEDVSNCPVGDLLDISQRLKTASEVNA 111
           F  E E+TV +     VSN P+  L+DI + +   +E  A
Sbjct: 20  FNRESEKTVIVPMDHGVSNGPIKGLIDIRKTVNDVAEGGA 59


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.315    0.132    0.366 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,056,750
Number of Sequences: 62578
Number of extensions: 127555
Number of successful extensions: 209
Number of sequences better than 100.0: 1
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 209
Number of HSP's gapped (non-prelim): 1
length of query: 161
length of database: 14,973,337
effective HSP length: 91
effective length of query: 70
effective length of database: 9,278,739
effective search space: 649511730
effective search space used: 649511730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.7 bits)