BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031317
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23685|AP1S2_ARATH AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana GN=AAP19-2
PE=2 SV=1
Length = 162
Score = 315 bits (807), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 149/161 (92%), Positives = 156/161 (96%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MIHFVLL+SRQGKVRLTKWYSPY QKERSKVIRELSGVIL RGPKLCNFVEWRGYKVVYK
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYASLYFCMC+DQEDNELE+LEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDE+LIA
Sbjct: 61 RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
GELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQAT
Sbjct: 121 GELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQATN 161
>sp|Q8LEZ8|AP1S1_ARATH AP-1 complex subunit sigma-1 OS=Arabidopsis thaliana GN=AAP19-1
PE=2 SV=1
Length = 161
Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 148/161 (91%), Positives = 157/161 (97%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MIHFVLL+SRQGKVRLTKWYSPYTQKERSKVIRELSGVIL RGPKLCNF+EWRGYKVVYK
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYK 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYASLYFCMC+D+ DNELE+LEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDE+LIA
Sbjct: 61 RYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
GELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQATK 161
>sp|B0G185|AP1S2_DICDI AP-1 complex subunit sigma-2 OS=Dictyostelium discoideum GN=ap1s2
PE=3 SV=1
Length = 154
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 127/144 (88%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
HF+LL+SRQGK RLTKWYSP+T KE+S+ RE+ ++L R PKLCNF+EW+ YK+++KR
Sbjct: 3 FHFLLLLSRQGKTRLTKWYSPFTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEYKIIFKR 62
Query: 62 YASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAG 121
YASLYF +C D+EDNEL +LEIIHH+VEILDRYFG+VCELDLIFNFHKAYYILDE+++AG
Sbjct: 63 YASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNFHKAYYILDELIMAG 122
Query: 122 ELQESSKKTVARLIAAQDSLVETA 145
ELQE+SKKTV RLI+ QD+L+E
Sbjct: 123 ELQETSKKTVLRLISQQDTLLEGG 146
>sp|Q9DB50|AP1S2_MOUSE AP-1 complex subunit sigma-2 OS=Mus musculus GN=Ap1s2 PE=2 SV=1
Length = 160
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 115/152 (75%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
+ F+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKR
Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
Query: 62 YASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAG 121
YASLYFC ++ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G
Sbjct: 61 YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
Query: 122 ELQESSKKTVARLIAAQDSLVETAKEQASSIS 153
E+QE+SKK V + I D L E AKE + S
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEDAKEAETPRS 152
>sp|Q3ZBS3|AP1S2_BOVIN AP-1 complex subunit sigma-2 OS=Bos taurus GN=AP1S2 PE=2 SV=1
Length = 160
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 115/152 (75%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
+ F+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKR
Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
Query: 62 YASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAG 121
YASLYFC ++ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G
Sbjct: 61 YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
Query: 122 ELQESSKKTVARLIAAQDSLVETAKEQASSIS 153
E+QE+SKK V + I D L E AKE + S
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEDAKEAETPRS 152
>sp|P56377|AP1S2_HUMAN AP-1 complex subunit sigma-2 OS=Homo sapiens GN=AP1S2 PE=1 SV=1
Length = 157
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 115/154 (74%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
+ F+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKR
Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
Query: 62 YASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAG 121
YASLYFC ++ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G
Sbjct: 61 YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
Query: 122 ELQESSKKTVARLIAAQDSLVETAKEQASSISNI 155
E+QE+SKK V + I D L E A+ S + I
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEEAETPRSVLEEI 154
>sp|Q9P7N2|AP1S1_SCHPO AP-1 complex subunit sigma-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vas2 PE=1 SV=1
Length = 162
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
I F LL+SRQGKVRL KW++ + KER+K+IR++S +++TR PK+CNFVE++G K+VY+R
Sbjct: 3 IKFFLLVSRQGKVRLAKWFNTLSIKERAKIIRDVSSLVITRKPKMCNFVEYKGEKIVYRR 62
Query: 62 YASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAG 121
YASL+F ++Q+DNEL ILE+IH +VE LD+YFG+VCELDLIFNF KAYY+++E+L+AG
Sbjct: 63 YASLFFVCGIEQDDNELIILEVIHKFVECLDKYFGNVCELDLIFNFEKAYYVMEELLLAG 122
Query: 122 ELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
ELQESSK V + A D+ E A Q S+ ++ K
Sbjct: 123 ELQESSKTNVLSAVLAGDAESE-ADAQQDSLQKLVGSVKK 161
>sp|P61967|AP1S1_MOUSE AP-1 complex subunit sigma-1A OS=Mus musculus GN=Ap1s1 PE=1 SV=1
Length = 158
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 117/155 (75%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
M+ F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYK
Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYASLYFC ++ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+
Sbjct: 61 RYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMG 120
Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNI 155
G++Q++SKK+V + I D L E + S + +
Sbjct: 121 GDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 155
>sp|P61966|AP1S1_HUMAN AP-1 complex subunit sigma-1A OS=Homo sapiens GN=AP1S1 PE=1 SV=1
Length = 158
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 117/155 (75%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
M+ F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYK
Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYASLYFC ++ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+
Sbjct: 61 RYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMG 120
Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNI 155
G++Q++SKK+V + I D L E + S + +
Sbjct: 121 GDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 155
>sp|Q1JQ98|AP1S1_BOVIN AP-1 complex subunit sigma-1A OS=Bos taurus GN=AP1S1 PE=2 SV=1
Length = 157
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 116/154 (75%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
+ F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYKR
Sbjct: 1 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKR 60
Query: 62 YASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAG 121
YASLYFC ++ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G
Sbjct: 61 YASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGG 120
Query: 122 ELQESSKKTVARLIAAQDSLVETAKEQASSISNI 155
++Q++SKK+V + I D L E + S + +
Sbjct: 121 DVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 154
>sp|Q7TN05|AP1S3_MOUSE AP-1 complex subunit sigma-3 OS=Mus musculus GN=Ap1s3 PE=2 SV=1
Length = 154
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 113/147 (76%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MIHF+LL SRQGK+RL KWY+ KER K+ R++ +L+RG + +F++W+ K+VYK
Sbjct: 1 MIHFILLFSRQGKLRLQKWYTTLPDKERKKITRDIIQTVLSRGHRTSSFIDWKELKLVYK 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYASLYFC ++ +DNEL LEI+H YVE+LD+YFG+VCELD+IFNF KAY+ILDE +I
Sbjct: 61 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
Query: 121 GELQESSKKTVARLIAAQDSLVETAKE 147
GE+QE+SKKT + I D L ET +E
Sbjct: 121 GEIQETSKKTAVKAIEDSDMLQETMEE 147
>sp|Q96PC3|AP1S3_HUMAN AP-1 complex subunit sigma-3 OS=Homo sapiens GN=AP1S3 PE=2 SV=1
Length = 154
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 110/145 (75%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MIHF+LL SRQGK+RL KWY KER K+ RE+ +IL+RG + +FV+W+ K+VYK
Sbjct: 1 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYASLYFC ++ +DNEL LEI+H YVE+LD+YFG+VCELD+IFNF KAY+ILDE +I
Sbjct: 61 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
Query: 121 GELQESSKKTVARLIAAQDSLVETA 145
GE+QE+SKK + I D L E +
Sbjct: 121 GEIQETSKKIAVKAIEDSDMLQEVS 145
>sp|Q54H39|AP2S_DICDI AP-2 complex subunit sigma OS=Dictyostelium discoideum GN=ap2s1
PE=3 SV=2
Length = 142
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 104/141 (73%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MIHF+L+ +RQGK RL+KWY+PY E+ K+ E+ ++ +R K NFVE+R +++VY+
Sbjct: 1 MIHFILIQNRQGKTRLSKWYTPYEDVEKRKLSHEIHKIVNSRETKFTNFVEFRTHRIVYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYA L+F +CVD DNEL LE IH +VE+LD YFG+VCELDL+FNF+K Y I+DE+ +A
Sbjct: 61 RYAGLFFSVCVDPTDNELFCLEAIHLFVEVLDAYFGNVCELDLVFNFYKVYAIIDEVFLA 120
Query: 121 GELQESSKKTVARLIAAQDSL 141
GEL E SK + + + D+L
Sbjct: 121 GELMEPSKHVILQRMEFLDNL 141
>sp|Q54WW3|AP1S1_DICDI AP-1 complex subunit sigma-1 OS=Dictyostelium discoideum GN=ap1s1
PE=3 SV=1
Length = 156
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 97/135 (71%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MIHF+L +RQ KVRL+K+YS YT E+++ RE+ +L+R PK CNFV+WR + +VY+
Sbjct: 1 MIHFLLCFNRQSKVRLSKFYSTYTPTEKNRATREVMNQVLSRSPKFCNFVQWREFTIVYQ 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
R+ASL+F M D DNEL LE I +V +LD FG++CELDLI+ F +AY +LDE L+
Sbjct: 61 RFASLFFVMVTDSTDNELVTLESIQRFVVVLDIVFGNICELDLIYEFQRAYQVLDEFLLT 120
Query: 121 GELQESSKKTVARLI 135
G LQESS K + R I
Sbjct: 121 GHLQESSSKEILRAI 135
>sp|Q84WL9|AP2S_ARATH AP-2 complex subunit sigma OS=Arabidopsis thaliana GN=AP17 PE=2
SV=1
Length = 142
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 102/141 (72%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F+LL +RQGK RL K+Y P + E+ KV E+ +++ R K NFVE+R +KV+Y+
Sbjct: 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYA L+F +CVD DNEL LE IH +VEILD +F +VCELDL+FNFHK Y ILDE ++A
Sbjct: 61 RYAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA 120
Query: 121 GELQESSKKTVARLIAAQDSL 141
GELQE+SK+ + ++ + L
Sbjct: 121 GELQETSKRAIIERMSELEKL 141
>sp|Q7SAQ1|AP2S_NEUCR AP-2 complex subunit sigma OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=aps-2 PE=3 SV=1
Length = 143
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKL-CNFVEWRGYKVVY 59
M+ F+L+ +RQGK RL KWY PY+ +E+ K+ E+ ++ R K NFVE+R +KVVY
Sbjct: 1 MLSFILIQNRQGKTRLAKWYVPYSDEEKIKLKGEIHRLVAPRDQKYQSNFVEFRNHKVVY 60
Query: 60 KRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILI 119
+RYA L+FC CVD DNEL LE IH +VE+LD +FG+VCELDL+FNF+K Y ILDE+ +
Sbjct: 61 RRYAGLFFCACVDTNDNELAYLEAIHFFVEVLDSFFGNVCELDLVFNFYKVYAILDEVFL 120
Query: 120 AGELQESSKKTVARLIAAQDSL 141
AGE++E+SK+ V + D L
Sbjct: 121 AGEIEETSKQVVLTRLEHLDKL 142
>sp|Q4ICG5|AP2S_GIBZE AP-2 complex subunit sigma OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=APS2 PE=3 SV=1
Length = 143
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKL-CNFVEWRGYKVVY 59
M+ F+L+ +RQGK RL KWY+P++ +++ K+ E+ ++ R K NFVE+R K+VY
Sbjct: 1 MLSFILIQNRQGKTRLAKWYAPFSDEQKIKLKGEVHRLVAPRDQKYQSNFVEFRNNKIVY 60
Query: 60 KRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILI 119
+RYA L+FC CVD DNEL LE IH +VE+LD +FG+VCELDL+FNF+K Y ILDE+ +
Sbjct: 61 RRYAGLFFCACVDTNDNELAFLEAIHFFVEVLDAFFGNVCELDLVFNFYKVYAILDEVFL 120
Query: 120 AGELQESSKKTVARLIAAQDSL 141
AGE++E+SK+ V + D L
Sbjct: 121 AGEIEETSKQVVLTRLEHLDKL 142
>sp|P62744|AP2S1_RAT AP-2 complex subunit sigma OS=Rattus norvegicus GN=Ap2s1 PE=2 SV=1
Length = 142
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 100/141 (70%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F+L+ +R GK RL KWY + E+ K+I E+ V+ R K NFVE+R +K++Y+
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYA LYFC+CVD DN L LE IH++VE+L+ YF +VCELDL+FNF+K Y ++DE+ +A
Sbjct: 61 RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
Query: 121 GELQESSKKTVARLIAAQDSL 141
GE++E+S+ V + + SL
Sbjct: 121 GEIRETSQTKVLKQLLMLQSL 141
>sp|Q5R940|AP2S1_PONAB AP-2 complex subunit sigma OS=Pongo abelii GN=AP2S1 PE=2 SV=1
Length = 142
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 100/141 (70%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F+L+ +R GK RL KWY + E+ K+I E+ V+ R K NFVE+R +K++Y+
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYA LYFC+CVD DN L LE IH++VE+L+ YF +VCELDL+FNF+K Y ++DE+ +A
Sbjct: 61 RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
Query: 121 GELQESSKKTVARLIAAQDSL 141
GE++E+S+ V + + SL
Sbjct: 121 GEIRETSQTKVLKQLLMLQSL 141
>sp|P62743|AP2S1_MOUSE AP-2 complex subunit sigma OS=Mus musculus GN=Ap2s1 PE=1 SV=1
Length = 142
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 100/141 (70%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F+L+ +R GK RL KWY + E+ K+I E+ V+ R K NFVE+R +K++Y+
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYA LYFC+CVD DN L LE IH++VE+L+ YF +VCELDL+FNF+K Y ++DE+ +A
Sbjct: 61 RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
Query: 121 GELQESSKKTVARLIAAQDSL 141
GE++E+S+ V + + SL
Sbjct: 121 GEIRETSQTKVLKQLLMLQSL 141
>sp|P53680|AP2S1_HUMAN AP-2 complex subunit sigma OS=Homo sapiens GN=AP2S1 PE=1 SV=2
Length = 142
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 100/141 (70%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F+L+ +R GK RL KWY + E+ K+I E+ V+ R K NFVE+R +K++Y+
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYA LYFC+CVD DN L LE IH++VE+L+ YF +VCELDL+FNF+K Y ++DE+ +A
Sbjct: 61 RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
Query: 121 GELQESSKKTVARLIAAQDSL 141
GE++E+S+ V + + SL
Sbjct: 121 GEIRETSQTKVLKQLLMLQSL 141
>sp|Q17QC5|AP2S1_BOVIN AP-2 complex subunit sigma OS=Bos taurus GN=AP2S1 PE=2 SV=1
Length = 142
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 100/141 (70%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F+L+ +R GK RL KWY + E+ K+I E+ V+ R K NFVE+R +K++Y+
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
RYA LYFC+CVD DN L LE IH++VE+L+ YF +VCELDL+FNF+K Y ++DE+ +A
Sbjct: 61 RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
Query: 121 GELQESSKKTVARLIAAQDSL 141
GE++E+S+ V + + SL
Sbjct: 121 GEIRETSQTKVLKQLLMLQSL 141
>sp|O50016|AP2S1_MAIZE AP-2 complex subunit sigma OS=Zea mays GN=AP-17 PE=2 SV=1
Length = 132
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 97/131 (74%), Gaps = 2/131 (1%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F+LL +RQGK RL K+Y P E+ KV E+ +++ R PK NFVE+R +KV+Y+
Sbjct: 1 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKA--YYILDEIL 118
RYA L+F +CVD DNEL LE IH +VEILD +F +VCELDL+FNFHK Y ILDE +
Sbjct: 61 RYAGLFFSICVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYRYLILDEFI 120
Query: 119 IAGELQESSKK 129
+AGELQE+SK+
Sbjct: 121 LAGELQETSKR 131
>sp|P35181|AP1S1_YEAST AP-1 complex subunit sigma-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APS1 PE=1 SV=1
Length = 156
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 105/142 (73%), Gaps = 2/142 (1%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
+ ++LL+SRQGK+RL KWY+ + E++K++++L+ IL R PK+CN +E+ +KVVYKR
Sbjct: 4 LKYLLLVSRQGKIRLKKWYTAMSAGEKAKIVKDLTPTILARKPKMCNIIEYNDHKVVYKR 63
Query: 62 YASLYFCMCVDQE-DNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
YASLYF + + + DNEL LEIIH +VE +D YFG+VCELD+IFNF K Y IL+E+++
Sbjct: 64 YASLYFIVGMTPDVDNELLTLEIIHRFVETMDTYFGNVCELDIIFNFSKVYDILNEMIMC 123
Query: 121 -GELQESSKKTVARLIAAQDSL 141
G + ESS+K V + D++
Sbjct: 124 DGSIAESSRKEVLHHVTVMDTM 145
>sp|Q4WS49|AP2S_ASPFU AP-2 complex subunit sigma OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=aps2 PE=3
SV=1
Length = 145
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 105/143 (73%), Gaps = 2/143 (1%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKL-CNFVEW-RGYKVV 58
++ F+L+ +RQGK RL KWY+PY+ +E+ K+ E+ ++ R K NFVE+ R K+V
Sbjct: 2 VLSFILVQNRQGKTRLAKWYAPYSDEEKVKLKGEVHRLVAPRDQKYQSNFVEFKRSTKIV 61
Query: 59 YKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEIL 118
Y+RYA L+FC+CVD DNEL LE IH +VE+LD++FG+VCELDL+FNF+K Y ILDE+
Sbjct: 62 YRRYAGLFFCVCVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVF 121
Query: 119 IAGELQESSKKTVARLIAAQDSL 141
+AGE++E+SK+ V + D L
Sbjct: 122 LAGEIEETSKQVVLTRLEHLDKL 144
>sp|Q9Y7L6|AP2S_SCHPO AP-2 complex subunit sigma OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=aps2 PE=3 SV=1
Length = 143
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKL-CNFVEWRGYKVVY 59
MI F+L+ +R GK RL+K+Y P+ E+ ++ + +I R K NF+EW K+VY
Sbjct: 1 MIQFILIQNRHGKNRLSKYYVPFDDDEKVRLKARIHQLISQRNQKFQANFLEWENSKLVY 60
Query: 60 KRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILI 119
+RYA LYFC CVD DN+L ILE+IH +VEILD +FG+VCELDLIFNF+K ILDEI++
Sbjct: 61 RRYAGLYFCFCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIIL 120
Query: 120 AGELQESSKKTVARLIAAQDSL 141
GE+ ES+KK+V I A + L
Sbjct: 121 GGEIGESNKKSVLERIEALEKL 142
>sp|Q5BFF8|AP2S_EMENI AP-2 complex subunit sigma OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=aps2 PE=3
SV=1
Length = 145
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 104/143 (72%), Gaps = 2/143 (1%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKL-CNFVEW-RGYKVV 58
++ F+L+ +RQGK RL KWY+PY+ +E+ K+ E+ ++ R K NFVE+ R K+V
Sbjct: 2 VLSFILVQNRQGKTRLAKWYAPYSDEEKVKLKGEVHRLVAPRDQKYQSNFVEFKRSTKIV 61
Query: 59 YKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEIL 118
Y+RYA L+FC CVD DNEL LE IH +VE+LD++FG+VCELDL+FNF+K Y ILDE+
Sbjct: 62 YRRYAGLFFCACVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVF 121
Query: 119 IAGELQESSKKTVARLIAAQDSL 141
+AGE++E+SK+ V + D L
Sbjct: 122 LAGEIEETSKQVVLTRLEHLDKL 144
>sp|O82201|AP4S_ARATH AP-4 complex subunit sigma OS=Arabidopsis thaliana GN=At2g19790
PE=2 SV=1
Length = 143
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 96/138 (69%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
I F+L++++QG+ RL ++Y T +ER + E+ L R + C+FVE R YK+VY+R
Sbjct: 3 IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRR 62
Query: 62 YASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAG 121
YASL+F + VD ++NEL ILE IH VE +D++FG+VCELD++F+ KA+++L+E+++ G
Sbjct: 63 YASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNG 122
Query: 122 ELQESSKKTVARLIAAQD 139
+ E+SK + I D
Sbjct: 123 CIVETSKANILSPIQLMD 140
>sp|Q09905|AP3S_SCHPO AP-3 complex subunit sigma OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=aps3 PE=3 SV=1
Length = 165
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWR----GYK 56
MI+ V + + +GK RLTK+Y+P + + K+I ++ + TR P CNF+E +
Sbjct: 1 MIYAVFIFNNKGKPRLTKFYTPIDESIQQKLIGDIYAAVSTRPPTACNFLESNLIAGKNR 60
Query: 57 VVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDE 116
++Y++YA+LYF VD+ ++EL IL++I +VE LDR F +VCELDL+F F + + IL E
Sbjct: 61 IIYRQYATLYFVFVVDEGESELGILDLIQVFVEALDRCFNNVCELDLVFKFQEIHAILAE 120
Query: 117 ILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIA 157
++ G + E++ + ++AAQ+ + +T + A SN ++
Sbjct: 121 VVSGGLVLETNLNEI--VLAAQNQMPKTKRSNAMPFSNTLS 159
>sp|Q5RDP9|AP3S2_PONAB AP-3 complex subunit sigma-2 OS=Pongo abelii GN=AP3S2 PE=2 SV=1
Length = 193
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RG 54
MI +L+ + GK RL ++Y + ++ + +++RE ++L R +CNF+E
Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60
Query: 55 YKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYIL 114
YK++Y+ YA+LYF CVD ++EL IL++I +VE LD+ F +VCELDLIF+ K +YIL
Sbjct: 61 YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYIL 120
Query: 115 DEILIAGELQESSKKTVARLIAAQDSL 141
E+++ G + E++ + I AQ+ L
Sbjct: 121 QEVVMGGMVLETNMNEIVAQIEAQNRL 147
>sp|Q8BSZ2|AP3S2_MOUSE AP-3 complex subunit sigma-2 OS=Mus musculus GN=Ap3s2 PE=1 SV=1
Length = 193
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RG 54
MI +L+ + GK RL ++Y + ++ + +++RE ++L R +CNF+E
Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60
Query: 55 YKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYIL 114
YK++Y+ YA+LYF CVD ++EL IL++I +VE LD+ F +VCELDLIF+ K +YIL
Sbjct: 61 YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYIL 120
Query: 115 DEILIAGELQESSKKTVARLIAAQDSL 141
E+++ G + E++ + I AQ+ L
Sbjct: 121 QEVVMGGMVLETNMNEIVAQIEAQNRL 147
>sp|P59780|AP3S2_HUMAN AP-3 complex subunit sigma-2 OS=Homo sapiens GN=AP3S2 PE=2 SV=1
Length = 193
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RG 54
MI +L+ + GK RL ++Y + ++ + +++RE ++L R +CNF+E
Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60
Query: 55 YKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYIL 114
YK++Y+ YA+LYF CVD ++EL IL++I +VE LD+ F +VCELDLIF+ K +YIL
Sbjct: 61 YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYIL 120
Query: 115 DEILIAGELQESSKKTVARLIAAQDSL 141
E+++ G + E++ + I AQ+ L
Sbjct: 121 QEVVMGGMVLETNMNEIVAQIEAQNRL 147
>sp|Q1JQA3|AP3S2_BOVIN AP-3 complex subunit sigma-2 OS=Bos taurus GN=AP3S2 PE=2 SV=1
Length = 193
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RG 54
MI +L+ + GK RL ++Y + ++ + +++RE ++L R +CNF+E
Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60
Query: 55 YKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYIL 114
YK++Y+ YA+LYF CVD ++EL IL++I +VE LD+ F +VCELDLIF+ K +YIL
Sbjct: 61 YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYIL 120
Query: 115 DEILIAGELQESSKKTVARLIAAQDSL 141
E+++ G + E++ + I AQ+ L
Sbjct: 121 QEVVMGGMVLETNMNEIVAQIEAQNRL 147
>sp|Q9DCR2|AP3S1_MOUSE AP-3 complex subunit sigma-1 OS=Mus musculus GN=Ap3s1 PE=1 SV=2
Length = 193
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 6/147 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RG 54
MI +L+ + GK RL+K+Y PY++ + ++IRE ++ R +CNF+E
Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60
Query: 55 YKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYIL 114
K++Y+ YA+LYF CVD ++EL IL++I +VE LD+ F +VCELDLIF+ K + IL
Sbjct: 61 NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL 120
Query: 115 DEILIAGELQESSKKTVARLIAAQDSL 141
E+++ G + E++ + I AQ+ L
Sbjct: 121 AEMVMGGMVLETNMNEIVTQIDAQNKL 147
>sp|Q92572|AP3S1_HUMAN AP-3 complex subunit sigma-1 OS=Homo sapiens GN=AP3S1 PE=1 SV=1
Length = 193
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 6/147 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RG 54
MI +L+ + GK RL+K+Y PY++ + ++IRE ++ R +CNF+E
Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60
Query: 55 YKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYIL 114
K++Y+ YA+LYF CVD ++EL IL++I +VE LD+ F +VCELDLIF+ K + IL
Sbjct: 61 NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL 120
Query: 115 DEILIAGELQESSKKTVARLIAAQDSL 141
E+++ G + E++ + I AQ+ L
Sbjct: 121 AEMVMGGMVLETNMNEIVTQIDAQNKL 147
>sp|Q2YDH6|AP3S1_BOVIN AP-3 complex subunit sigma-1 OS=Bos taurus GN=AP3S1 PE=2 SV=1
Length = 193
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 6/147 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RG 54
MI +L+ + GK RL+K+Y PY++ + ++IRE ++ R +CNF+E
Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60
Query: 55 YKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYIL 114
K++Y+ YA+LYF CVD ++EL IL++I +VE LD+ F +VCELDLIF+ K + IL
Sbjct: 61 NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL 120
Query: 115 DEILIAGELQESSKKTVARLIAAQDSL 141
E+++ G + E++ + I AQ+ L
Sbjct: 121 AEMVMGGMVLETNMNEIVTQIDAQNKL 147
>sp|Q9WVL1|AP4S1_MOUSE AP-4 complex subunit sigma-1 OS=Mus musculus GN=Ap4s1 PE=2 SV=1
Length = 144
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 96/144 (66%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F L++++QG+ RL+K+Y +R+ + E+S L+R + C+F+E++ +K++Y+
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRALLETEVSKSCLSRSSEQCSFIEYKDFKLIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
+YA+L+ + V+ +NE+ I E IH++VE+LD YF V ELD++FN K + ILDE+++
Sbjct: 61 QYAALFVVVGVNDTENEMAIYEFIHNFVEVLDGYFSRVSELDIMFNLDKVHIILDEMVLN 120
Query: 121 GELQESSKKTVARLIAAQDSLVET 144
G + E+++ + + D L E+
Sbjct: 121 GCIVETNRARILAPLLILDKLSES 144
>sp|Q553S2|AP3S_DICDI AP-3 complex subunit sigma OS=Dictyostelium discoideum GN=ap3s1
PE=3 SV=1
Length = 171
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 101/164 (61%), Gaps = 8/164 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW-------- 52
MI +L+I+ GK RL K+Y Y+++++ ++IREL ++ R + CNF+E
Sbjct: 1 MIKSILIINNHGKPRLIKFYEHYSEEKQQQIIRELFLLVSKRTERSCNFLEIGNNSNIFD 60
Query: 53 RGYKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYY 112
+ K++Y+ YA+L+F CVD ++EL I+++I +VE LD+ F +VCELDLIF+ K +Y
Sbjct: 61 KDTKIIYRHYATLFFIFCVDSSESELSIIDLIQTFVESLDKCFENVCELDLIFHIDKVHY 120
Query: 113 ILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNII 156
ILDE+++ G + E++ + Q+ L + S ++ ++
Sbjct: 121 ILDEMVMGGLVLETNPTIIFSNYEIQNKLEKAENPLLSGLAGVM 164
>sp|Q00381|AP2S_YEAST AP-2 complex subunit sigma OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APS2 PE=1 SV=1
Length = 147
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 94/144 (65%), Gaps = 4/144 (2%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYT-QKERSK-VIRELSGVILTRGPK-LCNFVEWR-GYKV 57
+ F+L ++QG VRL +W+ ++ +RS+ I ++ +I +R K NFVE+ K+
Sbjct: 3 VQFILCFNKQGVVRLVRWFDVHSSDPQRSQDAIAQIYRLISSRDHKHQSNFVEFSDSTKL 62
Query: 58 VYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEI 117
+Y+RYA LYF M VD D+E L IH +VE+LD +FG+VCELD++FNF+K Y I+DE+
Sbjct: 63 IYRRYAGLYFVMGVDLLDDEPIYLCHIHLFVEVLDAFFGNVCELDIVFNFYKVYMIMDEM 122
Query: 118 LIAGELQESSKKTVARLIAAQDSL 141
I GE+QE SK + ++ D L
Sbjct: 123 FIGGEIQEISKDMLLERLSILDRL 146
>sp|Q9Y587|AP4S1_HUMAN AP-4 complex subunit sigma-1 OS=Homo sapiens GN=AP4S1 PE=2 SV=1
Length = 144
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F L++++QG+ RL+K+Y +R+ + E+ L+R + C+F+E++ +K++Y+
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
+YA+L+ + V+ +NE+ I E IH++VE+LD YF V ELD++FN K + ILDE+++
Sbjct: 61 QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLN 120
Query: 121 GELQESSKKTVARLIAA 137
G + E+++ AR++A
Sbjct: 121 GCIVETNR---ARILAP 134
>sp|Q3ZBB6|AP4S1_BOVIN AP-4 complex subunit sigma-1 OS=Bos taurus GN=AP4S1 PE=2 SV=1
Length = 144
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60
MI F L++++QG+ RL+K+Y +R+ + E+ L+R + C+F+E++ +K++Y+
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVEINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
+YA+L+ + V+ +NE+ I E IH++VE+LD YF V ELD++FN K + ILDE+++
Sbjct: 61 QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDDYFSRVSELDIMFNLDKVHIILDEMVLN 120
Query: 121 GELQESSKKTVARLIAA 137
G + E+++ AR++A
Sbjct: 121 GCIVETNR---ARILAP 134
>sp|Q54NZ4|AP4S_DICDI AP-4 complex subunit sigma OS=Dictyostelium discoideum GN=ap4s1
PE=3 SV=1
Length = 139
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 90/134 (67%), Gaps = 4/134 (2%)
Query: 2 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKR 61
I + LL++ +GK RL+++Y +ER + E+ L+R C+FVE++ YKV+Y++
Sbjct: 3 IKYFLLVNIRGKTRLSQYYESIPFEERPAMESEIIRKCLSRTEIQCSFVEYKDYKVIYRK 62
Query: 62 YASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAG 121
YA+L+F + VD +NEL ILE+IH+YVEILD F +V ++FN KA++ILDE++ G
Sbjct: 63 YATLFFIVGVDTTENELAILELIHNYVEILDSCFDNV----IMFNLDKAHFILDEMVSNG 118
Query: 122 ELQESSKKTVARLI 135
++ E SK+ + +
Sbjct: 119 DIVEISKQHILEFV 132
>sp|Q8VZ37|AP3S_ARATH AP-3 complex subunit sigma OS=Arabidopsis thaliana GN=At3g50860
PE=2 SV=1
Length = 166
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 96/158 (60%), Gaps = 11/158 (6%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGY----- 55
MI V++++ QGK RL K+Y +++ ++IR + V+ +R + NF+E
Sbjct: 1 MIKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDS 60
Query: 56 KVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILD 115
++VYK YA+LYF + D +NEL +L++I VE LD+ F +VCELD++FN+ K + +LD
Sbjct: 61 RLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLD 120
Query: 116 EILIAGELQESSKKTVARLIAAQDSLVETAKEQASSIS 153
EI+ G++ E+S V + + E +K +A+S S
Sbjct: 121 EIVFGGQVLETSSAEVMKAVE------EISKLEAASNS 152
>sp|Q75F71|AP3S_ASHGO AP-3 complex subunit sigma OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APS3 PE=3 SV=1
Length = 185
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 25/167 (14%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVI------------------LTR 42
MIH VL+ +++ + RL K+Y+P ++ ++ ++ +I L+
Sbjct: 1 MIHAVLIFNKKCQPRLVKYYTPVDLPKQKLLLEQVYELISQRNSSIQSSFLITPPSLLSS 60
Query: 43 GPKLCNFVEWRGYKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELD 102
G + N +++YK YA+LYF VD +++EL IL++I +VE LDR F V ELD
Sbjct: 61 GSETIN----EDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVEALDRCFAEVNELD 116
Query: 103 LIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQA 149
LIFN+ +L+EI+ G + E++ V +++ D L T+ ++A
Sbjct: 117 LIFNWQTLESVLEEIIQGGMVIETN---VKKIVETVDELNRTSNQEA 160
>sp|P47064|AP3S_YEAST AP-3 complex subunit sigma OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APS3 PE=1 SV=1
Length = 194
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 21/175 (12%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRG-----------PKLC-- 47
MIH VL+ +++ + RL K+Y+P ++ ++ ++ +I R P L
Sbjct: 1 MIHAVLIFNKKCQPRLVKFYTPVDLPKQKLLLEQVYELISQRNSDFQSSFLVTPPSLLLS 60
Query: 48 -----NFVEWRGYKVVYKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELD 102
+ V +++YK YA+LYF VD +++EL IL++I +VE LDR F V ELD
Sbjct: 61 NENNNDEVNNEDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVESLDRCFTEVNELD 120
Query: 103 LIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIA 157
LIFN+ +L+EI+ G + E++ V R++A+ D L + A+ S I + +
Sbjct: 121 LIFNWQTLESVLEEIVQGGMVIETN---VNRIVASVDELNKAAESTDSKIGRLTS 172
>sp|P54672|AP2M_DICDI AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2
SV=2
Length = 439
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 1 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIR-ELSGVILTRGP-KLCNFVEWRGYKVV 58
MI + L++ +G+V +++ Y + + R E+ G TR P KL + +
Sbjct: 1 MISALFLMNGKGEVLISRIYRDDISRGVANAFRLEVIGSQETRSPVKLIGSTSF-----M 55
Query: 59 YKRYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEIL 118
Y + ++Y Q N + E++H V+I YF ++ E + NF Y +LDEIL
Sbjct: 56 YIKVGNIYIVGVSRQNVNACMVFEVLHQLVDIFKSYFDNLDEDSIRNNFVLVYELLDEIL 115
Query: 119 IAGELQESSKKTVARLIA-AQDSLVETAKEQASSISNIIAQAT 160
G Q S + I Q L K + IS I QAT
Sbjct: 116 DFGYPQNCSTDVLKLYITQGQGKLKSLDKLKQDKISKITIQAT 158
>sp|Q5ZMP6|AP2M1_CHICK AP-2 complex subunit mu OS=Gallus gallus GN=AP2M1 PE=2 SV=1
Length = 433
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
+ ++++ Q N + E ++ +++ YFG + E ++ NF Y +LDEIL
Sbjct: 59 KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMTAYFGKISEENIKNNFVLIYELLDEILDF 118
Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQ 158
G Q S + I Q +T +EQ+ S + Q
Sbjct: 119 GYPQNSETGALKTFITQQGIKSQTKEEQSQITSQVTGQ 156
>sp|P35603|AP2M_CAEEL AP-2 complex subunit mu OS=Caenorhabditis elegans GN=dpy-23 PE=2
SV=2
Length = 441
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
+ +++ C Q N + E + + + + YFG + E ++ NF Y +LDEIL
Sbjct: 59 KRGNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDF 118
Query: 121 GELQESSKKTVARLIAAQ-----DSLVETAKEQASSISN 154
G Q + + I Q D+ V KE+ S I++
Sbjct: 119 GYPQNTDPGVLKTFITQQGVRTADAPVPVTKEEQSQITS 157
>sp|Q801Q8|AP2M1_XENLA AP-2 complex subunit mu OS=Xenopus laevis GN=ap2m1 PE=2 SV=1
Length = 435
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
+ ++++ Q N + E ++ +++ YFG + E ++ NF Y +LDEIL
Sbjct: 59 KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMTAYFGKISEENIKNNFVLIYELLDEILDF 118
Query: 121 GELQESSKKTVARLIAAQD--SLVETAKEQASSISNIIAQ 158
G Q S + I Q S +T +EQ+ S + Q
Sbjct: 119 GYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQ 158
>sp|Q6P856|AP2M1_XENTR AP-2 complex subunit mu OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1
Length = 435
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 61 RYASLYFCMCVDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 120
+ ++++ Q N + E ++ +++ YFG + E ++ NF Y +LDEIL
Sbjct: 59 KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMTAYFGKISEENIKNNFVLIYELLDEILDF 118
Query: 121 GELQESSKKTVARLIAAQD--SLVETAKEQASSISNIIAQ 158
G Q S + I Q S +T +EQ+ S + Q
Sbjct: 119 GYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQ 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,787,376
Number of Sequences: 539616
Number of extensions: 2063863
Number of successful extensions: 5048
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 4927
Number of HSP's gapped (non-prelim): 132
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)