Query 031319
Match_columns 161
No_of_seqs 144 out of 1120
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 19:54:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zdn_A Ubiquitin-conjugating e 100.0 2.7E-44 9.1E-49 267.4 15.5 136 6-143 4-140 (158)
2 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.2E-43 7.6E-48 265.0 17.1 127 12-140 1-128 (169)
3 2e2c_A Ubiquitin conjugating e 100.0 2.4E-43 8.2E-48 261.8 15.7 129 12-142 6-135 (156)
4 4gpr_A Ubiquitin-conjugating e 100.0 4.9E-43 1.7E-47 258.8 17.2 128 13-142 2-130 (151)
5 2aak_A UBC1, ubiquitin conjuga 100.0 5.3E-43 1.8E-47 258.9 17.1 129 12-142 1-130 (152)
6 2ucz_A UBC7, ubiquitin conjuga 100.0 4E-43 1.4E-47 262.7 16.4 130 12-143 1-145 (165)
7 2ayv_A Ubiquitin-conjugating e 100.0 5.2E-43 1.8E-47 262.3 16.3 131 10-142 16-147 (166)
8 2c2v_B Ubiquitin-conjugating e 100.0 1.8E-43 6.3E-48 261.9 12.9 126 13-140 3-129 (154)
9 2c4o_A Ubiquitin-conjugating e 100.0 1.3E-42 4.4E-47 260.0 17.2 132 9-142 13-145 (165)
10 1z2u_A Ubiquitin-conjugating e 100.0 1.1E-42 3.8E-47 256.7 16.4 126 14-141 3-129 (150)
11 1i7k_A Ubiquitin-conjugating e 100.0 4.7E-43 1.6E-47 265.3 14.7 128 12-141 27-155 (179)
12 1yrv_A Ubiquitin-conjugating l 100.0 4.7E-43 1.6E-47 263.2 14.3 135 7-143 15-153 (169)
13 3h8k_A Ubiquitin-conjugating e 100.0 1.7E-42 5.9E-47 259.0 16.5 127 14-142 2-143 (164)
14 2r0j_A Ubiquitin carrier prote 100.0 1.1E-42 3.7E-47 256.5 15.1 123 17-141 3-126 (149)
15 2bep_A Ubiquitin-conjugating e 100.0 2.3E-42 7.8E-47 257.2 16.8 133 9-143 2-139 (159)
16 1yh2_A HSPC150 protein similar 100.0 2.8E-42 9.7E-47 259.0 17.2 126 13-140 2-132 (169)
17 2awf_A Ubiquitin-conjugating e 100.0 8E-43 2.7E-47 262.7 14.1 136 10-147 12-162 (172)
18 3rcz_B SUMO-conjugating enzyme 100.0 5.6E-42 1.9E-46 256.0 16.8 131 10-142 5-143 (163)
19 3rz3_A Ubiquitin-conjugating e 100.0 4E-42 1.4E-46 261.2 16.2 127 13-141 5-146 (183)
20 1jat_A Ubiquitin-conjugating e 100.0 1.3E-42 4.6E-47 257.5 13.1 125 15-141 5-130 (155)
21 2grr_A Ubiquitin-conjugating e 100.0 8.4E-42 2.9E-46 254.6 16.7 132 11-144 3-142 (161)
22 1fxt_A Ubiquitin-conjugating e 100.0 2.3E-42 8E-47 254.6 13.5 129 16-146 2-133 (149)
23 3fn1_B NEDD8-conjugating enzym 100.0 8.9E-42 3E-46 255.9 15.8 137 4-142 3-147 (167)
24 2gjd_A Ubiquitin-conjugating e 100.0 1.3E-41 4.4E-46 252.7 16.4 130 12-143 1-138 (157)
25 2f4z_A Tgtwinscan_2721 - E2 do 100.0 8.3E-42 2.8E-46 261.1 15.8 131 11-143 28-173 (193)
26 2pwq_A Ubiquitin conjugating e 100.0 4.5E-42 1.5E-46 266.6 13.9 130 9-140 17-148 (216)
27 3bzh_A Ubiquitin-conjugating e 100.0 2E-41 6.9E-46 259.3 17.1 127 14-142 47-174 (194)
28 2a4d_A Ubiquitin-conjugating e 100.0 4E-41 1.4E-45 250.4 15.4 127 11-138 21-155 (160)
29 3k9o_A Ubiquitin-conjugating e 100.0 3.1E-41 1.1E-45 259.7 14.7 127 12-140 2-133 (201)
30 2fo3_A Ubiquitin-conjugating e 100.0 3.8E-41 1.3E-45 241.5 13.8 115 14-130 5-121 (125)
31 2h2y_A Ubiquitin-conjugating e 100.0 9.3E-41 3.2E-45 242.7 15.8 116 13-129 18-134 (136)
32 3e46_A Ubiquitin-conjugating e 100.0 1.3E-40 4.5E-45 263.6 16.9 130 9-140 51-185 (253)
33 1wzv_A Ubiquitin-conjugating e 100.0 9.3E-41 3.2E-45 247.6 14.3 125 15-142 4-131 (155)
34 2y9m_A Ubiquitin-conjugating e 100.0 2.2E-40 7.5E-45 249.4 16.2 132 11-143 2-148 (172)
35 2a7l_A Hypothetical ubiquitin- 100.0 9.3E-41 3.2E-45 242.6 12.7 117 7-125 15-136 (136)
36 1y8x_A Ubiquitin-conjugating e 100.0 2.3E-40 7.8E-45 246.6 15.1 123 13-140 4-128 (160)
37 2nvu_C NEDD8-conjugating enzym 100.0 2E-40 6.7E-45 251.2 14.9 127 9-140 20-148 (180)
38 1tte_A Ubiquitin-conjugating e 100.0 4.5E-41 1.5E-45 260.9 10.5 122 16-139 3-127 (215)
39 1c4z_D UBCH7, ubiquitin conjug 100.0 9.9E-41 3.4E-45 247.2 11.2 132 16-150 3-137 (154)
40 2hlw_A Ubiquitin-conjugating e 100.0 1.7E-40 5.8E-45 249.4 11.4 125 13-138 33-165 (170)
41 2q0v_A Ubiquitin-conjugating e 100.0 8.3E-40 2.8E-44 242.6 12.8 127 10-139 16-150 (156)
42 2z5d_A Ubiquitin-conjugating e 100.0 3.3E-40 1.1E-44 249.5 9.9 123 15-142 25-149 (179)
43 2onu_A Ubiquitin-conjugating e 100.0 2.7E-40 9.1E-45 244.4 8.9 122 16-142 3-127 (152)
44 3o2u_A NEDD8-conjugating enzym 100.0 3.9E-39 1.3E-43 245.9 14.4 127 9-140 23-157 (190)
45 1jat_B Ubiquitin-conjugating e 100.0 1.8E-39 6.2E-44 236.5 10.1 122 15-139 6-135 (138)
46 1yf9_A Ubiquitin carrier prote 100.0 1.9E-39 6.3E-44 244.0 10.4 122 15-141 12-135 (171)
47 4ds2_A Ubiquitin-conjugating e 100.0 1.7E-39 5.9E-44 243.4 10.1 130 11-141 4-150 (167)
48 4ddg_A Ubiquitin-conjugating e 100.0 2.3E-38 7.9E-43 265.5 17.2 126 14-141 2-128 (399)
49 2f4w_A Ubiquitin-conjugating e 100.0 5.8E-38 2E-42 238.9 15.1 125 1-132 3-131 (187)
50 3ceg_A Baculoviral IAP repeat- 100.0 1.3E-36 4.5E-41 247.2 15.7 130 9-138 70-217 (323)
51 1zuo_A Hypothetical protein LO 100.0 8.6E-38 2.9E-42 237.8 7.4 120 7-127 19-156 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 2.8E-28 9.7E-33 179.9 3.3 100 13-118 30-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.9E-19 1E-23 132.5 9.8 113 18-132 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 7E-20 2.4E-24 132.5 2.3 100 13-117 32-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 2.7E-15 9.4E-20 109.3 7.0 84 40-129 50-141 (146)
56 2ebm_A RWD domain-containing p 96.0 0.03 1E-06 38.7 7.5 69 16-85 11-79 (128)
57 3zqs_A E3 ubiquitin-protein li 96.0 0.073 2.5E-06 39.7 9.7 83 18-126 4-88 (186)
58 2day_A Ring finger protein 25; 95.2 0.15 5.2E-06 35.0 8.6 103 19-126 12-124 (128)
59 2yz0_A Serine/threonine-protei 94.9 0.42 1.4E-05 33.2 10.3 69 16-85 11-86 (138)
60 2daw_A RWD domain containing p 94.7 0.18 6.1E-06 36.2 8.1 24 62-85 76-99 (154)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 93.6 0.28 9.6E-06 34.0 7.2 69 15-84 10-86 (137)
62 2ebk_A RWD domain-containing p 90.7 0.4 1.4E-05 32.9 4.9 65 19-84 11-79 (128)
63 2dax_A Protein C21ORF6; RWD do 87.6 0.34 1.1E-05 34.5 2.7 24 62-85 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 55.9 8.6 0.00029 18.5 2.0 21 15-35 5-25 (26)
65 2bum_A Protocatechuate 3,4-dio 38.5 30 0.001 25.8 3.7 26 59-84 109-139 (209)
66 3keb_A Probable thiol peroxida 31.7 31 0.0011 25.9 2.8 48 92-140 143-190 (224)
67 3rls_A YAF9, protein AF-9 homo 28.7 1.7E+02 0.0057 21.2 6.2 43 41-85 30-72 (175)
68 2bum_B Protocatechuate 3,4-dio 23.5 45 0.0015 25.5 2.4 26 59-84 134-166 (241)
69 2xsu_A Catechol 1,2 dioxygenas 22.2 49 0.0017 26.3 2.4 25 60-84 188-230 (312)
70 3t63_M 3,4-PCD, protocatechuat 21.6 51 0.0018 25.1 2.4 25 60-84 134-165 (238)
71 2azq_A Catechol 1,2-dioxygenas 21.4 51 0.0018 26.2 2.4 25 60-84 184-226 (311)
72 1tmx_A Hydroxyquinol 1,2-dioxy 21.1 53 0.0018 25.8 2.4 26 59-84 183-226 (293)
73 3n9t_A PNPC; phospholipid bind 20.5 56 0.0019 25.7 2.4 25 60-84 181-223 (290)
74 3t63_A 3,4-PCD, protocatechuat 20.4 64 0.0022 23.8 2.7 24 61-84 102-130 (200)
No 1
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-44 Score=267.43 Aligned_cols=136 Identities=21% Similarity=0.426 Sum_probs=125.1
Q ss_pred cccccccCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeC
Q 031319 6 APSRKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (161)
Q Consensus 6 a~~~~~~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~t 84 (161)
|++...++..+.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|
T Consensus 4 ~~~~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 83 (158)
T 1zdn_A 4 NSNVENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLT 83 (158)
T ss_dssp ----CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred cccccccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEecc
Confidence 345778999999999999999999999999986 6789999999999999999999999999999999999999999999
Q ss_pred CCCcCccccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHh
Q 031319 85 PAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNC 143 (161)
Q Consensus 85 p~i~HPnI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~ 143 (161)
+ +|||||+.+|.||+++|.++|+|+++|++||.+|+++|.+ |+.++|+|.++.....
T Consensus 84 ~-i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~-pn~~~p~n~~aa~~~~ 140 (158)
T 1zdn_A 84 K-IFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIH-PNPESALNEEAGRLLL 140 (158)
T ss_dssp C-CCCTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHS-CCGGGCSSHHHHHHHH
T ss_pred C-cccCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhC-CCCCCcccHHHHHHHH
Confidence 5 8999999999999999999999999999999999999999 9999999988865443
No 2
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-43 Score=265.02 Aligned_cols=127 Identities=34% Similarity=0.663 Sum_probs=119.4
Q ss_pred cCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCc
Q 031319 12 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (161)
Q Consensus 12 ~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HP 90 (161)
|++.+.+||++|+++|+++++.||.+. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~-i~HP 79 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSE-MFHP 79 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-CCCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccC-CccC
Confidence 445688999999999999999999986 67899999999999999999999999999999999999999999995 9999
Q ss_pred cccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 91 nI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
||+.+|.||+++|.++|+|+++|.+||.+|++||.+ |+.++|+|.++..
T Consensus 80 NI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~-Pn~~~P~n~~aa~ 128 (169)
T 1ayz_A 80 NVYANGEICLDILQNRWTPTYDVASILTSIQSLFND-PNPASPANVEAAT 128 (169)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTC-CCCSSCSSHHHHH
T ss_pred CCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhC-CCCCcHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999987744
No 3
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-43 Score=261.76 Aligned_cols=129 Identities=29% Similarity=0.574 Sum_probs=120.5
Q ss_pred cCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCc
Q 031319 12 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (161)
Q Consensus 12 ~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HP 90 (161)
+++.+.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ +|||
T Consensus 6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HP 84 (156)
T 2e2c_A 6 ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTP-CWHP 84 (156)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC-CCBT
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCC-cccC
Confidence 344578999999999999999999986 66799999999999999999999999999999999999999999995 8999
Q ss_pred cccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 91 nI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
||+.+|.||+++|.++|+|+++|.+||.+|++||.+ |+.++|+|.+|....
T Consensus 85 nv~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~-pn~~~p~n~~aa~~~ 135 (156)
T 2e2c_A 85 NVDQSGNICLDILKENWTASYDVRTILLSLQSLLGE-PNNASPLNAQAADMW 135 (156)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTS-CCCSSCSCHHHHHHT
T ss_pred CCccCceEECccccccCCCCCcHHHHHHHHHHHHhC-CCCCCHHHHHHHHHh
Confidence 999999999999999999999999999999999999 999999998876543
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=4.9e-43 Score=258.83 Aligned_cols=128 Identities=40% Similarity=0.677 Sum_probs=121.1
Q ss_pred CHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcc
Q 031319 13 SKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPn 91 (161)
+..|.+||++|+++|+++++.||++. .++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~-i~HPn 80 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTK-VYHPN 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSC-CCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecC-cccce
Confidence 56789999999999999999999986 57899999999999999999999999999999999999999999995 99999
Q ss_pred ccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 92 IYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 92 I~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+ |+.++|+|.++....
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~~ 130 (151)
T 4gpr_A 81 INKNGVICLDILKDQWSPALTLSRVLLSISSLLTD-PNPSDPLDPEVANVL 130 (151)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHC-CCTTSCSSHHHHHHH
T ss_pred ECCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcC-CCCCCchhHHHHHHH
Confidence 99999999999999999999999999999999999 999999998876543
No 5
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=5.3e-43 Score=258.87 Aligned_cols=129 Identities=34% Similarity=0.640 Sum_probs=120.8
Q ss_pred cCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCc
Q 031319 12 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (161)
Q Consensus 12 ~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HP 90 (161)
|++.+.+||++|+++|+++++.||.+. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ +|||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HP 79 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSR-MFHP 79 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-CCCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecC-cccC
Confidence 455788999999999999999999986 67899999999999999999999999999999999999999999995 9999
Q ss_pred cccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 91 nI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
||+.+|.||+++|.++|+|+++|.+||.+|+++|.+ |+.++|+|.+|....
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~~ 130 (152)
T 2aak_A 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMY 130 (152)
T ss_dssp TBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTS-CCTTSCSSHHHHHHH
T ss_pred CCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhC-CCCCccccHHHHHHH
Confidence 999999999999999999999999999999999998 999999998875443
No 6
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4e-43 Score=262.70 Aligned_cols=130 Identities=35% Similarity=0.678 Sum_probs=120.4
Q ss_pred cCHHHHHHHHHHHHHHhhCCCCCcEEe-e-cCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcC
Q 031319 12 LSKIASNRLQKELVEWQVNPPAGFKHK-V-TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLH 89 (161)
Q Consensus 12 ~~~~a~~RL~~El~~l~~~~~~~~~~~-~-~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~H 89 (161)
|++.+.+||++|+++|+++++.||++. . ++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~-i~H 79 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPS-ILH 79 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-CSC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCC-Ccc
Confidence 567899999999999999999999986 3 4699999999999999999999999999999999999999999995 899
Q ss_pred ccccCCCeeeeccC-------------CCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHh
Q 031319 90 PHIYSNGHICLDIL-------------YDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNC 143 (161)
Q Consensus 90 PnI~~~G~iCl~~l-------------~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~ 143 (161)
|||+.+|+||+++| .++|+|+++|++||.+|++||.+ |+.++|+|.+|.....
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~-Pn~~~p~n~~aa~~~~ 145 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSE-PNIESGANIDACILWR 145 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHS-CCGGGCCCHHHHHHHH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhC-CCCCCchhHHHHHHHH
Confidence 99999999999999 67899999999999999999998 9999999988765443
No 7
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.2e-43 Score=262.32 Aligned_cols=131 Identities=34% Similarity=0.593 Sum_probs=120.9
Q ss_pred cccCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCc
Q 031319 10 KALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPL 88 (161)
Q Consensus 10 ~~~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~ 88 (161)
....+.+.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||
T Consensus 16 ~~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~-i~ 94 (166)
T 2ayv_A 16 NLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTK-IY 94 (166)
T ss_dssp ---CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC-CC
T ss_pred cccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccC-Cc
Confidence 44566789999999999999999999986 67899999999999999999999999999999999999999999995 99
Q ss_pred CccccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 89 HPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 89 HPnI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
||||+.+|.||+++|.++|+|+++|.+||.+|++||.+ |+.++|+|.++....
T Consensus 95 HPNI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~-pn~~~Pln~~aa~l~ 147 (166)
T 2ayv_A 95 HPNINSQGAICLDILKDQWSPALTISKVLLSISSLLTD-PNPDDPLVPEIAHLY 147 (166)
T ss_dssp BTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHHHH
T ss_pred CCcCCCCCeEEcccccccCCCCCcHHHHHHHHHHHHhC-CCCCchhhHHHHHHH
Confidence 99999999999999999999999999999999999999 999999998876443
No 8
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-43 Score=261.89 Aligned_cols=126 Identities=34% Similarity=0.582 Sum_probs=116.6
Q ss_pred CHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcc
Q 031319 13 SKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPn 91 (161)
+..+.+||++|+++|+++++.||++. .++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |||||
T Consensus 3 s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPn 81 (154)
T 2c2v_B 3 SAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTK-IYHPN 81 (154)
T ss_dssp SCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC-CCCTT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecC-cccCc
Confidence 33567999999999999999999986 67899999999999999999999999999999999999999999995 99999
Q ss_pred ccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 92 IYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 92 I~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+ |+.++|+|.++..
T Consensus 82 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~-pn~~~p~n~~aa~ 129 (154)
T 2c2v_B 82 VDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA-PNPDDPLANDVAE 129 (154)
T ss_dssp BCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTS-CCCCCC--CHHHH
T ss_pred CccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhC-CCCCCcccHHHHH
Confidence 99999999999999999999999999999999999 9999999987754
No 9
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.3e-42 Score=259.98 Aligned_cols=132 Identities=35% Similarity=0.593 Sum_probs=121.6
Q ss_pred ccccCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCC
Q 031319 9 RKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (161)
Q Consensus 9 ~~~~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i 87 (161)
-+...+.+.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |
T Consensus 13 ~~~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~-i 91 (165)
T 2c4o_A 13 LVPRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-I 91 (165)
T ss_dssp ---CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC-C
T ss_pred cccCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecC-C
Confidence 445667899999999999999999999986 57899999999999999999999999999999999999999999995 9
Q ss_pred cCccccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 88 LHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 88 ~HPnI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
|||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+ |+.++|+|.++....
T Consensus 92 ~HPnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~-pn~~~P~n~~aa~~~ 145 (165)
T 2c4o_A 92 YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCD-PNPDDPLVPEIARIY 145 (165)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSSHHHHHHH
T ss_pred cCCcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhC-CCCCccccHHHHHHH
Confidence 999999999999999999999999999999999999999 999999998875433
No 10
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.1e-42 Score=256.65 Aligned_cols=126 Identities=39% Similarity=0.667 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccc
Q 031319 14 KIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI 92 (161)
Q Consensus 14 ~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI 92 (161)
..+.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||||||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPnv 81 (150)
T 1z2u_A 3 HMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-IYHPNI 81 (150)
T ss_dssp CHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC-CCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecC-cccCcC
Confidence 4578999999999999999999986 67899999999999999999999999999999999999999999995 999999
Q ss_pred cCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHH
Q 031319 93 YSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVK 141 (161)
Q Consensus 93 ~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~ 141 (161)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+ |+.++|+|.++...
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~-pn~~~p~n~~aa~~ 129 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSLLCD-PNPDDPLVPEIARI 129 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHHH
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhC-CCCCCccCHHHHHH
Confidence 9999999999999999999999999999999999 99999999887543
No 11
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-43 Score=265.30 Aligned_cols=128 Identities=33% Similarity=0.605 Sum_probs=119.3
Q ss_pred cCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCc
Q 031319 12 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (161)
Q Consensus 12 ~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HP 90 (161)
++..+.+||++||++|+++++.||++. .++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ ||||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~-i~HP 105 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTP-CYHP 105 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSC-CCST
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecC-CccC
Confidence 678889999999999999999999986 67899999999999999999999999999999999999999999995 9999
Q ss_pred cccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHH
Q 031319 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVK 141 (161)
Q Consensus 91 nI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~ 141 (161)
||+.+|.||+++|.++|+|+++|.+||.+|++||.+ |+.++|+|.++...
T Consensus 106 NV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~-Pn~~~Pln~~aa~l 155 (179)
T 1i7k_A 106 NVDTQGNISLDILKEKWSALYDVRTILLSIQSLLGE-PNIDSPLNTHAAEL 155 (179)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHHH
T ss_pred ccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhC-CCCcchhhHHHHHH
Confidence 999999999999999999999999999999999999 99999999887654
No 12
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-43 Score=263.18 Aligned_cols=135 Identities=24% Similarity=0.517 Sum_probs=125.7
Q ss_pred ccccccCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCC
Q 031319 7 PSRKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (161)
Q Consensus 7 ~~~~~~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp 85 (161)
-....|++.+.+||++|+++|+++++.||.+. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+
T Consensus 15 ~~~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~ 94 (169)
T 1yrv_A 15 VPRGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITI 94 (169)
T ss_dssp CCTTGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSC
T ss_pred cccCccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCC
Confidence 44667888999999999999999999999886 67899999999999999999999999999999999999999999995
Q ss_pred CCcCccc-cCCCeeeeccCC--CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHh
Q 031319 86 APLHPHI-YSNGHICLDILY--DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNC 143 (161)
Q Consensus 86 ~i~HPnI-~~~G~iCl~~l~--~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~ 143 (161)
|||||| +.+|.||+++|. ++|+|+++|++||.+|++||.+ |+.++|+|.+|.....
T Consensus 95 -i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~-Pn~~~Pln~eaa~l~~ 153 (169)
T 1yrv_A 95 -PFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSN-PVLENPVNLEAARILV 153 (169)
T ss_dssp -CCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTS-CCTTSCSCHHHHHHHH
T ss_pred -CccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhC-CCCCCchhHHHHHHHH
Confidence 999999 789999999998 8999999999999999999999 9999999998866543
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.7e-42 Score=259.00 Aligned_cols=127 Identities=29% Similarity=0.571 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEe-ec-CCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcc
Q 031319 14 KIASNRLQKELVEWQVNPPAGFKHK-VT-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (161)
Q Consensus 14 ~~a~~RL~~El~~l~~~~~~~~~~~-~~-~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPn 91 (161)
+.|.+||++|+++|+++++.||++. .+ +|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPN 80 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCE-MFHPN 80 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC-CCCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCC-CccCC
Confidence 4689999999999999999999986 44 499999999999999999999999999999999999999999996 99999
Q ss_pred ccCCCeeeeccCC-------------CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 92 IYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 92 I~~~G~iCl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
|+.+|+||+++|. ++|+|+++|++||.+|+++|.+ |+.++|+|.+|+...
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~-pn~~~p~n~~aa~~~ 143 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAE-PNDESGANVDASKMW 143 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHS-CCCSSCSSHHHHHHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcC-CCCCCccCHHHHHHH
Confidence 9999999999996 7899999999999999999999 999999998886543
No 14
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.1e-42 Score=256.48 Aligned_cols=123 Identities=40% Similarity=0.691 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccccCC
Q 031319 17 SNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSN 95 (161)
Q Consensus 17 ~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~~~ 95 (161)
.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||||||+.+
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPnv~~~ 81 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTK-IYHPNIDKL 81 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSC-CCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccC-CccCCCCCC
Confidence 5899999999999999999986 67899999999999999999999999999999999999999999995 899999999
Q ss_pred CeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHH
Q 031319 96 GHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVK 141 (161)
Q Consensus 96 G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~ 141 (161)
|+||+++|.++|+|+++|.+||.+|++||.+ |+.++|+|.++...
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~ 126 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSS-PEPDDPLDSKVAEH 126 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHS-CCTTSCSSCHHHHH
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhC-CCCCCchhHHHHHH
Confidence 9999999999999999999999999999999 99999999877543
No 15
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.3e-42 Score=257.21 Aligned_cols=133 Identities=32% Similarity=0.562 Sum_probs=121.4
Q ss_pred ccccCHHHHHHHHHHHHHHhhC---CCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeC
Q 031319 9 RKALSKIASNRLQKELVEWQVN---PPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (161)
Q Consensus 9 ~~~~~~~a~~RL~~El~~l~~~---~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~t 84 (161)
++.|++.+.+||++|+++|+++ ++.|+++. .++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|
T Consensus 2 ~~~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 81 (159)
T 2bep_A 2 AMAMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT 81 (159)
T ss_dssp --CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred CccchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeC
Confidence 4568889999999999999985 57799886 5789999999999999999999999999999999999999999999
Q ss_pred CCCcCcccc-CCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHh
Q 031319 85 PAPLHPHIY-SNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNC 143 (161)
Q Consensus 85 p~i~HPnI~-~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~ 143 (161)
+ ||||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+ |+.++|+|.++.....
T Consensus 82 ~-i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~~~ 139 (159)
T 2bep_A 82 K-IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAA-AEPDDPQDAVVANQYK 139 (159)
T ss_dssp C-CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHHHHH
T ss_pred C-CCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhC-CCCCCcccHHHHHHHH
Confidence 5 9999999 499999999999999999999999999999999 8999999988765433
No 16
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-42 Score=259.05 Aligned_cols=126 Identities=34% Similarity=0.605 Sum_probs=119.1
Q ss_pred CHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcc
Q 031319 13 SKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPn 91 (161)
+..+.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPN 80 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTP-IYHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC-CCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecC-Ccccc
Confidence 45789999999999999999999986 57899999999999999999999999999999999999999999995 89999
Q ss_pred ccCCCeeeeccCC----CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 92 IYSNGHICLDILY----DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 92 I~~~G~iCl~~l~----~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
|+.+|.||+++|. ++|+|+++|++||.+|++||.+ |+.++|+|.++..
T Consensus 81 v~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~-p~~~~p~n~~aa~ 132 (169)
T 1yh2_A 81 IDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSE-PNPDDPLMADISS 132 (169)
T ss_dssp BCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHS-CCTTSCSCHHHHH
T ss_pred CCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhC-CCCcchHhHHHHH
Confidence 9999999999998 8999999999999999999999 9999999987744
No 17
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=8e-43 Score=262.67 Aligned_cols=136 Identities=32% Similarity=0.635 Sum_probs=109.5
Q ss_pred cccCHHHHHHHHHHHHHHhhCCCCCcEEe-e-cCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCC
Q 031319 10 KALSKIASNRLQKELVEWQVNPPAGFKHK-V-TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (161)
Q Consensus 10 ~~~~~~a~~RL~~El~~l~~~~~~~~~~~-~-~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i 87 (161)
...++.+.+||++|+++|+++++.||++. . ++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |
T Consensus 12 ~~~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~-i 90 (172)
T 2awf_A 12 SGLVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITE-I 90 (172)
T ss_dssp -CCCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC-C
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCC-C
Confidence 34577889999999999999999999986 3 4699999999999999999999999999999999999999999996 8
Q ss_pred cCccccCCCeeeeccCC-------------CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHhhCCC
Q 031319 88 LHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGR 147 (161)
Q Consensus 88 ~HPnI~~~G~iCl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~~~~~ 147 (161)
|||||+.+|+||+++|. ++|+|+++|++||.+|++||.+ |+.++|+|.+|.....+...
T Consensus 91 ~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~-Pn~~~p~n~~aa~~~~~d~~ 162 (172)
T 2awf_A 91 WHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLAD-PNGDSPANVDAAKEWREDRN 162 (172)
T ss_dssp CCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSC-C-------------------
T ss_pred ccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHC-cCCCCccCHHHHHHHHHCcH
Confidence 99999999999999996 6899999999999999999999 99999999988765544333
No 18
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=5.6e-42 Score=256.02 Aligned_cols=131 Identities=32% Similarity=0.727 Sum_probs=118.7
Q ss_pred cccCHHHHHHHHHHHHHHhhCCCCCcEEe-ecC-----CceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEe
Q 031319 10 KALSKIASNRLQKELVEWQVNPPAGFKHK-VTD-----NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFL 83 (161)
Q Consensus 10 ~~~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~-----~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~ 83 (161)
..-+.+|.+||++|+++|+++++.||++. .++ |++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.
T Consensus 5 ~~~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~ 84 (163)
T 3rcz_B 5 HHHSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFT 84 (163)
T ss_dssp ----CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cCCcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEe
Confidence 34577899999999999999999999986 444 899999999999999999999999999999999999999999
Q ss_pred CCCCcCccccCCCeeeeccCCC--CCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 84 PPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 84 tp~i~HPnI~~~G~iCl~~l~~--~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
|+ ||||||+.+|.||+++|.. +|+|+++|++||.+|+++|.+ |+.++|+|.+++...
T Consensus 85 t~-i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~-P~~~~p~n~~aa~~~ 143 (163)
T 3rcz_B 85 PP-LFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDD-PNIASPAQTEAYTMF 143 (163)
T ss_dssp SC-CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTS-CCTTSCSCHHHHHHH
T ss_pred CC-CccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhC-CCCCCccCHHHHHHH
Confidence 95 9999999999999999976 499999999999999999988 999999998876543
No 19
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=4e-42 Score=261.17 Aligned_cols=127 Identities=31% Similarity=0.627 Sum_probs=118.7
Q ss_pred CHHHHHHHHHHHHHHhhCCCCCcEEe--ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCc
Q 031319 13 SKIASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~~~~~--~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HP 90 (161)
++.+.+||++||++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ +|||
T Consensus 5 ~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HP 83 (183)
T 3rz3_A 5 SPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTK-MWHP 83 (183)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC-CCCT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCC-CccC
Confidence 35689999999999999999999986 45799999999999999999999999999999999999999999996 8999
Q ss_pred cccCCCeeeeccCC-------------CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHH
Q 031319 91 HIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVK 141 (161)
Q Consensus 91 nI~~~G~iCl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~ 141 (161)
||+++|+||+++|. ++|+|+++|++||.+|++||.+ |+.++|+|.+|...
T Consensus 84 nV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~-Pn~~~p~n~~aa~~ 146 (183)
T 3rz3_A 84 NIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNE-PNTFSPANVDASVM 146 (183)
T ss_dssp TBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHS-CCCSSCSSHHHHHH
T ss_pred CCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhC-CCCCCcccHHHHHH
Confidence 99999999999996 7899999999999999999999 99999999988654
No 20
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.3e-42 Score=257.48 Aligned_cols=125 Identities=35% Similarity=0.631 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcccc
Q 031319 15 IASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (161)
Q Consensus 15 ~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~ 93 (161)
.+.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||||||+
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPnv~ 83 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTK-IYHPNID 83 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSC-CCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecc-cccCCCC
Confidence 356999999999999999999986 67899999999999999999999999999999999999999999995 9999999
Q ss_pred CCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHH
Q 031319 94 SNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVK 141 (161)
Q Consensus 94 ~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~ 141 (161)
.+|.||+++|.++|+|+++|.+||.+|++||.+ |+.++|+|.++...
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~ 130 (155)
T 1jat_A 84 RLGRICLDVLKTNWSPALQIRTVLLSIQALLAS-PNPNDPLANDVAED 130 (155)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSTTCCTTHHH
T ss_pred CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhC-CCCCCcccHHHHHH
Confidence 999999999999999999999999999999999 89999998776443
No 21
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=8.4e-42 Score=254.65 Aligned_cols=132 Identities=34% Similarity=0.707 Sum_probs=121.3
Q ss_pred ccCHHHHHHHHHHHHHHhhCCCCCcEEe-e-----cCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeC
Q 031319 11 ALSKIASNRLQKELVEWQVNPPAGFKHK-V-----TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (161)
Q Consensus 11 ~~~~~a~~RL~~El~~l~~~~~~~~~~~-~-----~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~t 84 (161)
.|++.+.+||++|+++|+++++.|+.+. . ++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 4778899999999999999999999885 3 258999999999999999999999999999999999999999999
Q ss_pred CCCcCccccCCCeeeeccCCC--CCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHhh
Q 031319 85 PAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCR 144 (161)
Q Consensus 85 p~i~HPnI~~~G~iCl~~l~~--~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~~ 144 (161)
+ +|||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+ |+.++|+|.+|+.....
T Consensus 83 ~-i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~~~~ 142 (161)
T 2grr_A 83 P-LFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNE-PNIQSPAQAEAYTIYCQ 142 (161)
T ss_dssp C-CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHHHHHH
T ss_pred C-cccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhC-CCCCCccCHHHHHHHHH
Confidence 5 8999999999999999976 899999999999999999998 99999999888665443
No 22
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.3e-42 Score=254.65 Aligned_cols=129 Identities=31% Similarity=0.576 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEe-ecC-CceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcccc
Q 031319 16 ASNRLQKELVEWQVNPPAGFKHK-VTD-NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (161)
Q Consensus 16 a~~RL~~El~~l~~~~~~~~~~~-~~~-~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~ 93 (161)
+.+||++|+++|+++++.||++. .++ |++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||||||+
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPni~ 80 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTK-VYHPNIS 80 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSC-CCBTTBC
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCC-CccCCCc
Confidence 57999999999999999999986 445 89999999999999999999999999999999999999999995 9999999
Q ss_pred C-CCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHhhCC
Q 031319 94 S-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNG 146 (161)
Q Consensus 94 ~-~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~~~~ 146 (161)
. +|.||+++|.++|+|+++|.+||.+|+++|.+ |+.++|+|.++........
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~~~~d~ 133 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQS-PEPNDPQDAEVAQHYLRDR 133 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHS-CCSSSCSSHHHHHHHHHCS
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhC-CCCCCcccHHHHHHHHHCH
Confidence 8 99999999999999999999999999999999 9999999998876554433
No 23
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=8.9e-42 Score=255.85 Aligned_cols=137 Identities=23% Similarity=0.428 Sum_probs=122.3
Q ss_pred CCcccccccCHHHHHHHHHHHHHHhhCCCCCcEEe--ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEE
Q 031319 4 SSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVI 81 (161)
Q Consensus 4 ~~a~~~~~~~~~a~~RL~~El~~l~~~~~~~~~~~--~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~ 81 (161)
+++++.....+.+.+||++|+++|+++++.||++. .+++++.|.++| ||++|||+||.|+|+|.||++||++||+|+
T Consensus 3 ~~~~~~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 81 (167)
T 3fn1_B 3 ATASDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVK 81 (167)
T ss_dssp -----CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEE
T ss_pred cccCCCccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeE
Confidence 34455677788999999999999999999999986 357899999988 899999999999999999999999999999
Q ss_pred EeCCCCcCccccCCCeeeeccCCC------CCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 82 FLPPAPLHPHIYSNGHICLDILYD------SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 82 f~tp~i~HPnI~~~G~iCl~~l~~------~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
|.|+ ||||||+.+|.||+++|.. +|+|+++|++||.+|+++|.++|+.++|+|.+|....
T Consensus 82 f~t~-i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~ 147 (167)
T 3fn1_B 82 CLTK-IWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHH 147 (167)
T ss_dssp ECSC-CCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHH
T ss_pred ecCC-cccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHH
Confidence 9996 8999999999999999975 7999999999999999999997799999998886543
No 24
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.3e-41 Score=252.71 Aligned_cols=130 Identities=32% Similarity=0.691 Sum_probs=118.7
Q ss_pred cCHHHHHHHHHHHHHHhhCCCCCcEEe-ec-----CCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCC
Q 031319 12 LSKIASNRLQKELVEWQVNPPAGFKHK-VT-----DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (161)
Q Consensus 12 ~~~~a~~RL~~El~~l~~~~~~~~~~~-~~-----~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp 85 (161)
|++.+.+||++|+++|+++++.|+.+. .+ +|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 445788999999999999999999986 32 489999999999999999999999999999999999999999995
Q ss_pred CCcCccccCCCeeeeccCCC--CCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHh
Q 031319 86 APLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNC 143 (161)
Q Consensus 86 ~i~HPnI~~~G~iCl~~l~~--~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~ 143 (161)
+|||||+.+|.||+++|.+ +|+|+++|++||.+|+++|.+ |+.++|+|.+|+....
T Consensus 81 -i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~~~ 138 (157)
T 2gjd_A 81 -FYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDS-PNPNSPAQEPAWRSFS 138 (157)
T ss_dssp -CCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTS-CCTTCCCCHHHHHHHH
T ss_pred -CccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhC-CCCCCccCHHHHHHHH
Confidence 9999999999999999987 799999999999999999988 9999999988765443
No 25
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=8.3e-42 Score=261.13 Aligned_cols=131 Identities=33% Similarity=0.556 Sum_probs=116.2
Q ss_pred ccCHHHHHHHHHHHHHHhhCCC-------------CCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCC
Q 031319 11 ALSKIASNRLQKELVEWQVNPP-------------AGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPME 76 (161)
Q Consensus 11 ~~~~~a~~RL~~El~~l~~~~~-------------~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~ 76 (161)
..+..+.+||++|+++|+++++ .||.+. .++|++.|+++|.||+||||+||.|+|+|.||++||++
T Consensus 28 ~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 107 (193)
T 2f4z_A 28 RGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYN 107 (193)
T ss_dssp ----CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCC
Confidence 3445688999999999999876 789886 67899999999999999999999999999999999999
Q ss_pred CCeEEEeCCCCcCcccc-CCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHh
Q 031319 77 APQVIFLPPAPLHPHIY-SNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNC 143 (161)
Q Consensus 77 pP~v~f~tp~i~HPnI~-~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~ 143 (161)
||+|+|.|+ ||||||+ .+|.||+++|.++|+|+++|++||.+|++||.+ |+.++|+|.++.....
T Consensus 108 PP~V~F~T~-i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~-pnp~~P~n~~aa~l~~ 173 (193)
T 2f4z_A 108 PPKMKFVTK-IWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLAD-PVPTDPQDAEVAKMMI 173 (193)
T ss_dssp CCEEEESSC-CCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHS-CCTTSCSCHHHHHHHH
T ss_pred CCeEEEecC-CccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhC-CCCCCcccHHHHHHHH
Confidence 999999995 9999999 599999999999999999999999999999999 9999999988755443
No 26
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=4.5e-42 Score=266.60 Aligned_cols=130 Identities=30% Similarity=0.539 Sum_probs=120.0
Q ss_pred ccccCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCC
Q 031319 9 RKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (161)
Q Consensus 9 ~~~~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i 87 (161)
...+.+.+.+||++|+++|+++++.||++. .++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |
T Consensus 17 ~~~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~-i 95 (216)
T 2pwq_A 17 LYFQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTK-I 95 (216)
T ss_dssp --CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC-C
T ss_pred cccccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCC-C
Confidence 344567889999999999999999999986 67899999999999999999999999999999999999999999995 9
Q ss_pred cCcccc-CCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 88 LHPHIY-SNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 88 ~HPnI~-~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
|||||+ .+|.||+++|.++|+|+++|.+||.+|++||.+ |++++|+|.++..
T Consensus 96 ~HPNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~-Pnp~dPln~eaa~ 148 (216)
T 2pwq_A 96 WHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSD-PQPDDPQDAEVAK 148 (216)
T ss_dssp CBTTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHH
T ss_pred cCCCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhC-CCCCCcccHHHHH
Confidence 999999 599999999999999999999999999999999 9999999976643
No 27
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=2e-41 Score=259.25 Aligned_cols=127 Identities=35% Similarity=0.641 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccc
Q 031319 14 KIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI 92 (161)
Q Consensus 14 ~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI 92 (161)
+.+.+||++||++|+++++.||.+. .++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ ||||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~-i~HPNV 125 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTR-IYHCNI 125 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-CCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCC-CccceE
Confidence 6688999999999999999999986 67899999999999999999999999999999999999999999995 999999
Q ss_pred cCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 93 YSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 93 ~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
+.+|.||+++|.++|+|+++|.+||.+|++||.+ |+.++|+|.+++...
T Consensus 126 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~-pnp~~Pln~~aa~l~ 174 (194)
T 3bzh_A 126 NSQGVICLDILKDNWSPALTISKVLLSICSLLTD-CNPADPLVGSIATQY 174 (194)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHHHH
T ss_pred CCCCceechhhhccCCCcCcHHHHHHHHHHHHhC-CCCccchhHHHHHHH
Confidence 9999999999999999999999999999999999 999999998876543
No 28
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=4e-41 Score=250.43 Aligned_cols=127 Identities=22% Similarity=0.344 Sum_probs=116.5
Q ss_pred ccCHHHHHHHHHHHHHHhhCCCCC-cEEe--ecCC--ceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCC
Q 031319 11 ALSKIASNRLQKELVEWQVNPPAG-FKHK--VTDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (161)
Q Consensus 11 ~~~~~a~~RL~~El~~l~~~~~~~-~~~~--~~~~--~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp 85 (161)
.+...+.+||++|+++|+++++.| +.+. .++| ++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+
T Consensus 21 ~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 21 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred eeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC
Confidence 345778999999999999988888 6665 3444 8999999999999999999999999999999999999999995
Q ss_pred CCcCcccc-CCCeeeeccCC--CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhH
Q 031319 86 APLHPHIY-SNGHICLDILY--DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDR 138 (161)
Q Consensus 86 ~i~HPnI~-~~G~iCl~~l~--~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~ 138 (161)
||||||+ .+|+||+++|. ++|+|+++|++||.+|++||.++|+.++|+|.|+
T Consensus 101 -i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~ea 155 (160)
T 2a4d_A 101 -INMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 155 (160)
T ss_dssp -CCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTT
T ss_pred -ceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhh
Confidence 8999999 69999999997 8999999999999999999988899999999886
No 29
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.1e-41 Score=259.68 Aligned_cols=127 Identities=33% Similarity=0.602 Sum_probs=116.8
Q ss_pred cCHHHHHHHHHHHHHHhhC---CCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCC
Q 031319 12 LSKIASNRLQKELVEWQVN---PPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (161)
Q Consensus 12 ~~~~a~~RL~~El~~l~~~---~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i 87 (161)
|++.+.+||++|+++|+++ ++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~-i 80 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK-I 80 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-C
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC-c
Confidence 5567799999999999987 36799886 67899999999999999999999999999999999999999999995 9
Q ss_pred cCccccC-CCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 88 LHPHIYS-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 88 ~HPnI~~-~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
|||||+. +|.||+++|.++|+|+++|++||.+|+++|.+ |++++|+|.++..
T Consensus 81 ~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~-p~p~~p~n~~aa~ 133 (201)
T 3k9o_A 81 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAA-AEPDDPQDAVVAN 133 (201)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHH
T ss_pred ccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcC-CCCCCcccHHHHH
Confidence 9999994 99999999999999999999999999999999 9999999987754
No 30
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-41 Score=241.54 Aligned_cols=115 Identities=42% Similarity=0.801 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCC-cCcc
Q 031319 14 KIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP-LHPH 91 (161)
Q Consensus 14 ~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i-~HPn 91 (161)
+.+.+||++|+++++++++.|+++. .++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ + ||||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~-i~~HPn 83 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQK-PPKHTH 83 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSS-CCCBTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCC-CCCCCc
Confidence 3578999999999999999999986 67899999999999999999999999999999999999999999995 5 9999
Q ss_pred ccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCC
Q 031319 92 IYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVK 130 (161)
Q Consensus 92 I~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~ 130 (161)
|+.+|+||+++|.++|+|+++|++||.+|++||.+ |+.
T Consensus 84 v~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~-p~~ 121 (125)
T 2fo3_A 84 VYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSS-AKE 121 (125)
T ss_dssp BCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhC-ccc
Confidence 99999999999999999999999999999999999 543
No 31
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.3e-41 Score=242.72 Aligned_cols=116 Identities=41% Similarity=0.779 Sum_probs=108.7
Q ss_pred CHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcc
Q 031319 13 SKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPn 91 (161)
.+.+.+||++|+++++++++.|+.+. .++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+.+||||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 34688999999999999999999886 57899999999999999999999999999999999999999999995239999
Q ss_pred ccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCC
Q 031319 92 IYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTV 129 (161)
Q Consensus 92 I~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~ 129 (161)
|+.+|+||+++|.++|+|+++|++||.+|++||.+ |+
T Consensus 98 v~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~-p~ 134 (136)
T 2h2y_A 98 VYSNGDICLSVLGDDYNPSLSISGLILSIISMLSS-AK 134 (136)
T ss_dssp BCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSS-SC
T ss_pred CCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhC-cC
Confidence 99999999999999999999999999999999999 54
No 32
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.3e-40 Score=263.61 Aligned_cols=130 Identities=32% Similarity=0.572 Sum_probs=120.6
Q ss_pred ccccCHHHHHHHHHHHHHHhhC---CCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeC
Q 031319 9 RKALSKIASNRLQKELVEWQVN---PPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (161)
Q Consensus 9 ~~~~~~~a~~RL~~El~~l~~~---~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~t 84 (161)
+..|++.+.+||++||++|+++ ++.||++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|
T Consensus 51 ~~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 130 (253)
T 3e46_A 51 EFDMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT 130 (253)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecC
Confidence 4567899999999999999987 46799886 6789999999999999999999999999999999999999999999
Q ss_pred CCCcCcccc-CCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 85 PAPLHPHIY-SNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 85 p~i~HPnI~-~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
+ ||||||+ .+|.||+++|.++|+|+++|++||.+|+++|.+ |++++|+|.++..
T Consensus 131 ~-i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~-pnp~~Pln~eaa~ 185 (253)
T 3e46_A 131 K-IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAA-AEPDDPQDAVVAN 185 (253)
T ss_dssp C-CCBTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHS-CCTTSCSCHHHHH
T ss_pred C-CccCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcC-CCCCChhhHHHHH
Confidence 5 9999999 499999999999999999999999999999999 9999999887754
No 33
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=9.3e-41 Score=247.57 Aligned_cols=125 Identities=26% Similarity=0.489 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEE-e-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccc
Q 031319 15 IASNRLQKELVEWQVNPPAGFKH-K-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI 92 (161)
Q Consensus 15 ~a~~RL~~El~~l~~~~~~~~~~-~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI 92 (161)
.+.+||++|+++|+++++.||.+ . .++|+++|+++|. |+||||+||.|+|+|.||++||++||+|+|.|+ +|||||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPnV 81 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTK-IYHPNV 81 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSC-CCBTTB
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCC-CccCcC
Confidence 46899999999999999999998 4 5789999999999 999999999999999999999999999999995 899999
Q ss_pred cCCCeeeeccC-CCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHH
Q 031319 93 YSNGHICLDIL-YDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 93 ~~~G~iCl~~l-~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
+.+|.||+++| .++|+|+++|.+||.+|+++|.+ |+.++|+|.++....
T Consensus 82 ~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~~ 131 (155)
T 1wzv_A 82 DENGQICLPIISSENWKPCTKTCQVLEALNVLVNR-PNIREPLRMDLADLL 131 (155)
T ss_dssp CTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHS-CCSSSCSSHHHHHHH
T ss_pred CCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhC-CCCCchHHHHHHHHH
Confidence 99999999999 88999999999999999999998 999999998875443
No 34
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.2e-40 Score=249.39 Aligned_cols=132 Identities=25% Similarity=0.450 Sum_probs=116.4
Q ss_pred ccCHHHHHHHHHHHHHHhh-C-C------CC---CcEEe--ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCC
Q 031319 11 ALSKIASNRLQKELVEWQV-N-P------PA---GFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEA 77 (161)
Q Consensus 11 ~~~~~a~~RL~~El~~l~~-~-~------~~---~~~~~--~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~p 77 (161)
.|++.+.+||++|+++|++ . + +. ++.+. .++|++.|+++|.||+||||+||.|+|+|.||++||++|
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 5788999999999999998 4 3 22 34443 467999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCcCcccc-CCCeeeeccCC-CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHh
Q 031319 78 PQVIFLPPAPLHPHIY-SNGHICLDILY-DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNC 143 (161)
Q Consensus 78 P~v~f~tp~i~HPnI~-~~G~iCl~~l~-~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~ 143 (161)
|+|+|.|++||||||+ .+|.||+++|. ++|+|+++|++||.+|++||.+ |+.++|+|.++.....
T Consensus 82 P~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~-p~~~~p~n~~aa~~~~ 148 (172)
T 2y9m_A 82 PKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLRE-PVCDSPLDVDIGNIIR 148 (172)
T ss_dssp CEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSSHHHHHHHT
T ss_pred CEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhC-CCCCCccCHHHHHHHH
Confidence 9999999338999995 79999999998 8999999999999999999999 9999999988865443
No 35
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.3e-41 Score=242.61 Aligned_cols=117 Identities=50% Similarity=1.010 Sum_probs=107.2
Q ss_pred ccccccCHHHHHHHHHHHHHHhhCCCCCcEEe---ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEe
Q 031319 7 PSRKALSKIASNRLQKELVEWQVNPPAGFKHK---VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFL 83 (161)
Q Consensus 7 ~~~~~~~~~a~~RL~~El~~l~~~~~~~~~~~---~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~ 83 (161)
...+.|+..+ +||++|+++|+++++.|+++. .++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.
T Consensus 15 ~~~~~Ms~~~-~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 93 (136)
T 2a7l_A 15 VPRGSMASMQ-KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFT 93 (136)
T ss_dssp CCGGGGTTSC-HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEE
T ss_pred ccchhccHHH-HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEe
Confidence 3445565543 999999999999999999853 578999999999999999999999999999999999999999999
Q ss_pred CCCCc--CccccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhC
Q 031319 84 PPAPL--HPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125 (161)
Q Consensus 84 tp~i~--HPnI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~ 125 (161)
|+ +| ||||+.+|+||+++|.++|+|+++|++||.+|++||.
T Consensus 94 T~-i~~~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 94 GE-NIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp SS-CCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CC-CcCCCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 96 78 9999999999999999999999999999999999984
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-40 Score=246.65 Aligned_cols=123 Identities=23% Similarity=0.449 Sum_probs=114.1
Q ss_pred CHHHHHHHHHHHHHHhhCCCCCcEEe--ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCc
Q 031319 13 SKIASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~~~~~--~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HP 90 (161)
.+.+.+||++|+++| +++.|+++. .++|++.|+++| ||++|||+||.|+|+|.||++||++||+|+|.|+ ||||
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HP 79 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM-VYHP 79 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSC-CCBT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecC-CccC
Confidence 356899999999999 466788886 468999999988 9999999999999999999999999999999995 9999
Q ss_pred cccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 91 nI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
||+.+|.||+++|.++|+|+++|.+||.+|+++|.+ |+.++|+|.+|..
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~-Pn~~~p~n~~aa~ 128 (160)
T 1y8x_A 80 NIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLE-PNPEDPLNKEAAE 128 (160)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCCSSCSCHHHHH
T ss_pred cCCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhC-CCCCCccCHHHHH
Confidence 999999999999999999999999999999999999 9999999887754
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-40 Score=251.21 Aligned_cols=127 Identities=21% Similarity=0.399 Sum_probs=117.4
Q ss_pred ccccCHHHHHHHHHHHHHHhhCCCCCcEEe--ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCC
Q 031319 9 RKALSKIASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPA 86 (161)
Q Consensus 9 ~~~~~~~a~~RL~~El~~l~~~~~~~~~~~--~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~ 86 (161)
+..+++.+.+||++|+++| +++.|+++. .++|++.|+++| ||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 20 ~~~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~- 95 (180)
T 2nvu_C 20 SSKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM- 95 (180)
T ss_dssp CCCSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSC-
T ss_pred ccCCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceecc-
Confidence 4566788999999999999 467789886 468999999988 9999999999999999999999999999999995
Q ss_pred CcCccccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 87 PLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 87 i~HPnI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
||||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+ |+.++|+|.++..
T Consensus 96 i~HPNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~-Pn~~~p~n~~aa~ 148 (180)
T 2nvu_C 96 VYHPNIDLEGNVALNILREDWKPVLTINSIIYGLQYLFLE-PNPEDPLNKEAAE 148 (180)
T ss_dssp CCBTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHS-CCTTSCSSHHHHH
T ss_pred CccCCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhC-CCCCCccCHHHHH
Confidence 9999999999999999999999999999999999999999 9999999887744
No 38
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=4.5e-41 Score=260.85 Aligned_cols=122 Identities=32% Similarity=0.604 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEe-ecC-CceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcccc
Q 031319 16 ASNRLQKELVEWQVNPPAGFKHK-VTD-NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (161)
Q Consensus 16 a~~RL~~El~~l~~~~~~~~~~~-~~~-~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~ 93 (161)
+.+||++|+++|+++++.||++. .++ +++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||||||+
T Consensus 3 a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~-i~HPNI~ 81 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTK-VYHPNIS 81 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTT-CCCSSSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCC-CccCcCc
Confidence 57999999999999999999996 444 56799999999999999999999999999999999999999995 9999999
Q ss_pred C-CCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHH
Q 031319 94 S-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRY 139 (161)
Q Consensus 94 ~-~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~ 139 (161)
. +|.||+++|.++|+|+++|.+||.+|++||.+ |+.++|+|.++.
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~-Pnp~~Pln~eaa 127 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQS-PEPNDPQDAEVA 127 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTS-CCCSSCSCHHHH
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhC-CCCCCccCHHHH
Confidence 9 99999999999999999999999999999999 999999987753
No 39
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=9.9e-41 Score=247.17 Aligned_cols=132 Identities=25% Similarity=0.504 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEe--ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcccc
Q 031319 16 ASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (161)
Q Consensus 16 a~~RL~~El~~l~~~~~~~~~~~--~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~ 93 (161)
+.+||++|+++|+++++.|+.+. .++|++.|+++|. |+||||+||.|+|+|.||++||++||+|+|.|+ +|||||+
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~HPnv~ 80 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTK-IYHPNID 80 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSC-CCCTTBC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCC-CccccCC
Confidence 56899999999999999999853 5679999999998 999999999999999999999999999999995 8999999
Q ss_pred CCCeeeeccCC-CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHHHhhCCCCCC
Q 031319 94 SNGHICLDILY-DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPK 150 (161)
Q Consensus 94 ~~G~iCl~~l~-~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~~~~~~~~~~ 150 (161)
.+|.||+++|. ++|+|+++|.+||.+|++||.+ |+.++|+|.++............
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~~aa~~~~~~~~~f~ 137 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVND-PQPEHPLRADLAEEYSKDRKKFC 137 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHS-CCCSSCSCHHHHHHHHTCSSTTH
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcC-CCCCchhhHHHHHHHHHhHHHHH
Confidence 99999999996 7899999999999999999998 99999999998766555444433
No 40
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=249.40 Aligned_cols=125 Identities=22% Similarity=0.344 Sum_probs=114.7
Q ss_pred CHHHHHHHHHHHHHHhhCCCCC-cEEe--ecCC--ceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCC
Q 031319 13 SKIASNRLQKELVEWQVNPPAG-FKHK--VTDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~-~~~~--~~~~--~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i 87 (161)
...+.+||++|+++|+++++.| +.+. .++| +++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ |
T Consensus 33 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~-i 111 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK-I 111 (170)
T ss_dssp CCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBC-C
T ss_pred cCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecc-c
Confidence 4557899999999999988878 5564 3444 9999999999999999999999999999999999999999995 8
Q ss_pred cCcccc-CCCeeeeccCC--CCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhH
Q 031319 88 LHPHIY-SNGHICLDILY--DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDR 138 (161)
Q Consensus 88 ~HPnI~-~~G~iCl~~l~--~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~ 138 (161)
|||||+ .+|.||+++|. ++|+|+++|++||.+|++||.++|+.++|+|.|+
T Consensus 112 ~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~ea 165 (170)
T 2hlw_A 112 NMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 165 (170)
T ss_dssp CCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSC
T ss_pred ccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCccc
Confidence 999999 79999999997 8999999999999999999998899999999876
No 41
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=8.3e-40 Score=242.59 Aligned_cols=127 Identities=24% Similarity=0.365 Sum_probs=115.2
Q ss_pred cccCHHHHHHHHHHHHHHhhC-CCCCcEEee--cC--CceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeC
Q 031319 10 KALSKIASNRLQKELVEWQVN-PPAGFKHKV--TD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (161)
Q Consensus 10 ~~~~~~a~~RL~~El~~l~~~-~~~~~~~~~--~~--~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~t 84 (161)
......+.+||++|+++|+++ ++.++++.. ++ |++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|
T Consensus 16 ~~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t 95 (156)
T 2q0v_A 16 FQGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDT 95 (156)
T ss_dssp CSSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred CcccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEc
Confidence 345667789999999999998 788998863 23 5999999999999999999999999999999999999999999
Q ss_pred CCCcCccccCCCee---eeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHH
Q 031319 85 PAPLHPHIYSNGHI---CLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRY 139 (161)
Q Consensus 85 p~i~HPnI~~~G~i---Cl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~ 139 (161)
+ ||||||+.+|+| |+++|. +|+|+++|++||.+|++||.+ |+.++|+|.+|.
T Consensus 96 ~-i~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~-Pn~~~p~n~~aa 150 (156)
T 2q0v_A 96 K-IEMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLS-SANKRLPQPNEG 150 (156)
T ss_dssp C-CCCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTS-TTTTTCCCCCTT
T ss_pred c-cccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhC-CCCCCcCChHHH
Confidence 5 999999999999 888887 499999999999999999999 899999987764
No 42
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=249.50 Aligned_cols=123 Identities=20% Similarity=0.529 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEEeecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccccC
Q 031319 15 IASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYS 94 (161)
Q Consensus 15 ~a~~RL~~El~~l~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~~ 94 (161)
.+.+||++|+++|+. .|+++...+|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ ||||||+.
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~-i~HPNV~~ 100 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNK-IFHPNIDE 100 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEEEETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-CCBTTBCT
T ss_pred HHHHHHHHHHHhcCc---CCCEEEECCCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecC-CccCcCCC
Confidence 589999999999985 47777644678999999999999999999999999999999999999999995 99999998
Q ss_pred -CCeeeeccCCCCCCCcCCHHHHHHH-HHHHhCCCCCCCCCCChhHHHHH
Q 031319 95 -NGHICLDILYDSWSPAMTVSSVCIS-ILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 95 -~G~iCl~~l~~~W~p~~~i~~vl~~-i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
+|.||+++|.++|+|+++|++||.+ |++||.+ |+.++|+|.++....
T Consensus 101 ~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~-Pn~~~p~n~eaa~~~ 149 (179)
T 2z5d_A 101 ASGTVCLDVINQTWTALYDLTNIFESFLPQLLAY-PNPIDPLNGDAAAMY 149 (179)
T ss_dssp TTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHS-CCCSSCSCHHHHHHH
T ss_pred CCCeEeccccccCCCCCCCHHHHHHHHHHHHHhC-CCCCCccCHHHHHHH
Confidence 9999999999999999999999999 9999999 999999998875433
No 43
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.7e-40 Score=244.41 Aligned_cols=122 Identities=22% Similarity=0.510 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccccC
Q 031319 16 ASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYS 94 (161)
Q Consensus 16 a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~~ 94 (161)
+.+||++|++++++. |+++. .++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||||||+.
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~-i~HPni~~ 78 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNK-LLHPNVDE 78 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-CCCTTBCT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecC-CccCcCcC
Confidence 468999999999874 67775 67899999999999999999999999999999999999999999995 99999995
Q ss_pred -CCeeeeccCCCCCCCcCCHHHHHHH-HHHHhCCCCCCCCCCChhHHHHH
Q 031319 95 -NGHICLDILYDSWSPAMTVSSVCIS-ILSMLSSSTVKQRPADNDRYVKN 142 (161)
Q Consensus 95 -~G~iCl~~l~~~W~p~~~i~~vl~~-i~~ll~~~p~~~~p~~~~~~~~~ 142 (161)
+|.||+++|.++|+|+++|.+||.+ |++||.+ |+.++|+|.+|....
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~-Pn~~~P~n~~aa~~~ 127 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTY-PNPSDPLNSDAASLL 127 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHS-CCCSSCSSHHHHHHH
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhC-CCCCCcccHHHHHHH
Confidence 9999999999999999999999999 6899988 999999998875443
No 44
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=3.9e-39 Score=245.94 Aligned_cols=127 Identities=25% Similarity=0.473 Sum_probs=116.4
Q ss_pred ccccCHHHHHHHHHHHHHHhhCCCCCcEEe-----ecCCce---eEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeE
Q 031319 9 RKALSKIASNRLQKELVEWQVNPPAGFKHK-----VTDNLQ---RWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQV 80 (161)
Q Consensus 9 ~~~~~~~a~~RL~~El~~l~~~~~~~~~~~-----~~~~~~---~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v 80 (161)
.....+.+.+||++||++|+ ++.++++. .++|++ .|+++|. |++|||+||.|+|+|.||++||++||+|
T Consensus 23 ~~~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v 99 (190)
T 3o2u_A 23 IQPNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKV 99 (190)
T ss_dssp SSCCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEE
T ss_pred CCCCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCcee
Confidence 44566788999999999998 56788874 467999 9999997 7889999999999999999999999999
Q ss_pred EEeCCCCcCccccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 81 IFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 81 ~f~tp~i~HPnI~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
+|.|+ ||||||+.+|.||+++|.++|+|+++|++||.+|+++|.+ |+.++|+|.++..
T Consensus 100 ~f~t~-i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~-pn~~~pln~~aa~ 157 (190)
T 3o2u_A 100 VCLKK-IFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLE-PNPNDPLNKDAAK 157 (190)
T ss_dssp EECSC-CCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHS-CCTTSCSSHHHHH
T ss_pred EEecC-cccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhC-CCCCcchhHHHHH
Confidence 99995 8999999999999999999999999999999999999999 9999999887754
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1.8e-39 Score=236.45 Aligned_cols=122 Identities=19% Similarity=0.366 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHhhC-CCCCcEEee--cC--CceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcC
Q 031319 15 IASNRLQKELVEWQVN-PPAGFKHKV--TD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLH 89 (161)
Q Consensus 15 ~a~~RL~~El~~l~~~-~~~~~~~~~--~~--~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~H 89 (161)
.+.+||++|+++++++ ++.++++.. ++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ |||
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~-i~H 84 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK-INL 84 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC-CCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc-ccc
Confidence 4569999999999998 788998863 23 49999999999999999999999999999999999999999995 999
Q ss_pred ccccCC-Cee--eeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHH
Q 031319 90 PHIYSN-GHI--CLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRY 139 (161)
Q Consensus 90 PnI~~~-G~i--Cl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~ 139 (161)
|||+.+ |.| |+++|. +|+|+++|++||.+|+++|.+ |+.++|+|.++.
T Consensus 85 Pnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~-pn~~~p~~~~~~ 135 (138)
T 1jat_B 85 PCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMAT-PANKKLRQPKEG 135 (138)
T ss_dssp TTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTS-HHHHTSCCCCTT
T ss_pred CCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcC-CCCCCCCCcchh
Confidence 999986 999 999886 799999999999999999999 899999987763
No 46
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-39 Score=244.04 Aligned_cols=122 Identities=21% Similarity=0.463 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEEeecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccccC
Q 031319 15 IASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYS 94 (161)
Q Consensus 15 ~a~~RL~~El~~l~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~~ 94 (161)
.+.+||++|+++|++++. ++ ..++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+ ||||||+.
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v--~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~-i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV--YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNR-ILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE--EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC-CCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC--CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecC-cccccCcc
Confidence 567999999999999873 33 567899999999999999999999999999999999999999999995 99999994
Q ss_pred -CCeeeeccCCCCCCCcCCHHHHHHHH-HHHhCCCCCCCCCCChhHHHH
Q 031319 95 -NGHICLDILYDSWSPAMTVSSVCISI-LSMLSSSTVKQRPADNDRYVK 141 (161)
Q Consensus 95 -~G~iCl~~l~~~W~p~~~i~~vl~~i-~~ll~~~p~~~~p~~~~~~~~ 141 (161)
+|.||+++|.++|+|+++|++||.+| ++||.+ |+.++|+|.++...
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~-Pn~~~p~n~~aa~~ 135 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRY-PNPSDPLNVQAAHL 135 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHS-CCSSCCSCHHHHHH
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhC-CCCCCcccHHHHHH
Confidence 99999999999999999999999998 688887 99999999877543
No 47
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.7e-39 Score=243.42 Aligned_cols=130 Identities=24% Similarity=0.464 Sum_probs=115.6
Q ss_pred ccCHHHHHHHHHHHHHHhhCC------------CCCcEEe-ecCCceeEEEEEecCCCCCCC--CCeEEEEEEcCCCCCC
Q 031319 11 ALSKIASNRLQKELVEWQVNP------------PAGFKHK-VTDNLQRWIIEVNGAPGTLYA--NETFELQVDFPEHYPM 75 (161)
Q Consensus 11 ~~~~~a~~RL~~El~~l~~~~------------~~~~~~~-~~~~~~~w~~~i~gp~~tpye--gg~f~~~l~fp~~YP~ 75 (161)
.|++.+.+||++|+++|++++ ..++.+. .++|+++|+++|.||+||||+ ||.|+|+|.||++||+
T Consensus 4 ~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 4 SMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred cccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 456667899999999999876 6678876 678999999999999999999 9999999999999999
Q ss_pred CCCeEEEeCCCCcCccccCCCeeeeccCCCCCCCcCCHHHHHH-HHHHHhCC-CCCCCCCCChhHHHH
Q 031319 76 EAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCI-SILSMLSS-STVKQRPADNDRYVK 141 (161)
Q Consensus 76 ~pP~v~f~tp~i~HPnI~~~G~iCl~~l~~~W~p~~~i~~vl~-~i~~ll~~-~p~~~~p~~~~~~~~ 141 (161)
+||+|+|.|+ ||||||+.+|.||+++|.++|+|+++++++|. .|+.|+.. +|+.++|+|.+|+..
T Consensus 84 ~pP~v~f~t~-i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l 150 (167)
T 4ds2_A 84 EPPTVRFVTP-VYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHY 150 (167)
T ss_dssp SCCEEEESSC-CCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHH
T ss_pred CCCEEEEeCC-cccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHH
Confidence 9999999996 89999999999999999999999999999754 67777765 378999999887543
No 48
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2.3e-38 Score=265.51 Aligned_cols=126 Identities=36% Similarity=0.607 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccc
Q 031319 14 KIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI 92 (161)
Q Consensus 14 ~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI 92 (161)
+.|.+||++|+++|+++++.|+++. .++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|| ||||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~-i~HPnv 80 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-IYHPNI 80 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSC-CCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecc-cccccc
Confidence 5789999999999999999999986 67899999999999999999999999999999999999999999996 999999
Q ss_pred cCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHHH
Q 031319 93 YSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVK 141 (161)
Q Consensus 93 ~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~~ 141 (161)
+.+|.||+++|.++|+|+++|++||.+|+++|.+ |++++|+|.++...
T Consensus 81 ~~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~-pnp~~p~n~~aa~~ 128 (399)
T 4ddg_A 81 NSNGSISLDILRSQWSPALTISKVLLSICSLLCD-PNPDDPLVPEIARI 128 (399)
T ss_dssp CTTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHS-CCTTSCSSHHHHHH
T ss_pred CCCCeEeCcccccCCCccccHHHHHHHHHHHHcC-CCCCchhhHHHHHH
Confidence 9999999999999999999999999999999999 99999999877543
No 49
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.8e-38 Score=238.92 Aligned_cols=125 Identities=25% Similarity=0.498 Sum_probs=101.2
Q ss_pred CCCCCcccccccCHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCe
Q 031319 1 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQ 79 (161)
Q Consensus 1 m~s~~a~~~~~~~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~ 79 (161)
|+|++ ....++.+.+||++|+++|+++++.||.+. .++|+++|+++|.||+||||+||.|+|+|.||++||++||+
T Consensus 3 mss~~---~~~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~ 79 (187)
T 2f4w_A 3 MSSTS---SKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPS 79 (187)
T ss_dssp --------------CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCE
T ss_pred CCccC---CCCCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCc
Confidence 66665 336678899999999999999999999986 67899999999999999999999999999999999999999
Q ss_pred EEEeCCCCcCccccCCCeeeeccC---CCCCCCcCCHHHHHHHHHHHhCCCCCCCC
Q 031319 80 VIFLPPAPLHPHIYSNGHICLDIL---YDSWSPAMTVSSVCISILSMLSSSTVKQR 132 (161)
Q Consensus 80 v~f~tp~i~HPnI~~~G~iCl~~l---~~~W~p~~~i~~vl~~i~~ll~~~p~~~~ 132 (161)
|+|.|| ||||+.+|+||+++| .++|+|+++|.+||.+|+++|.+ |+...
T Consensus 80 v~f~T~---~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~-p~p~~ 131 (187)
T 2f4w_A 80 IYMITP---NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVE-KGPTL 131 (187)
T ss_dssp EEECSC---CSSBCTTSCBC----------CCTTCCHHHHHHHHHHHHHS-CCCCT
T ss_pred ccccCC---CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcC-CCCCC
Confidence 999995 999999999999999 68999999999999999999998 66543
No 50
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=247.19 Aligned_cols=130 Identities=27% Similarity=0.494 Sum_probs=116.3
Q ss_pred ccccCHHHHHHHHHHHHHHhhCCCCCc----EEe-ecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEe
Q 031319 9 RKALSKIASNRLQKELVEWQVNPPAGF----KHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFL 83 (161)
Q Consensus 9 ~~~~~~~a~~RL~~El~~l~~~~~~~~----~~~-~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~ 83 (161)
+..++..+.+||++|+++|+++++.++ .+. .++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.
T Consensus 70 ~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 70 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 346789999999999999999877653 343 678999999999999999999999999999999999999999999
Q ss_pred CC----CCcCccccCCCeeeeccCC-------CCCCCcC-CHHHHHHHHHHHhC-CCCCCCCCCChhH
Q 031319 84 PP----APLHPHIYSNGHICLDILY-------DSWSPAM-TVSSVCISILSMLS-SSTVKQRPADNDR 138 (161)
Q Consensus 84 tp----~i~HPnI~~~G~iCl~~l~-------~~W~p~~-~i~~vl~~i~~ll~-~~p~~~~p~~~~~ 138 (161)
|+ .||||||+.+|+||+++|. ++|+|++ +|.+||.+|++||. .+|+.++|++.++
T Consensus 150 T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a 217 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERS 217 (323)
T ss_dssp CSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGG
T ss_pred ccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHH
Confidence 95 2899999999999999997 6899999 89999999999996 3588899987643
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=8.6e-38 Score=237.76 Aligned_cols=120 Identities=25% Similarity=0.466 Sum_probs=108.3
Q ss_pred ccccccCHHHHHHHHHHHHHHhhCC---CCCcEEe-ecCCceeEEEEEecC-CCCCCCC-----------CeEEEEEEcC
Q 031319 7 PSRKALSKIASNRLQKELVEWQVNP---PAGFKHK-VTDNLQRWIIEVNGA-PGTLYAN-----------ETFELQVDFP 70 (161)
Q Consensus 7 ~~~~~~~~~a~~RL~~El~~l~~~~---~~~~~~~-~~~~~~~w~~~i~gp-~~tpyeg-----------g~f~~~l~fp 70 (161)
.+...|+..+.+||++||++|++++ +.++.+. .++|++.|.++|.|| ++|||+| |.|+|+|.||
T Consensus 19 ~g~~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp 98 (186)
T 1zuo_A 19 SGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFK 98 (186)
T ss_dssp -----CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCcccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECC
Confidence 4567788999999999999999987 6788886 678999999999997 9999998 8999999999
Q ss_pred CCCCCCCCeEEEeCCCCcCc-cccCCCeeeeccCC-CCCCCcCCHHHHHHHHHHHhCCC
Q 031319 71 EHYPMEAPQVIFLPPAPLHP-HIYSNGHICLDILY-DSWSPAMTVSSVCISILSMLSSS 127 (161)
Q Consensus 71 ~~YP~~pP~v~f~tp~i~HP-nI~~~G~iCl~~l~-~~W~p~~~i~~vl~~i~~ll~~~ 127 (161)
++||++||+|+|.|| +||| ||+.+|.||+++|. ++|+|+++|++||.+|++||.++
T Consensus 99 ~~YP~~PP~V~f~tp-i~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p 156 (186)
T 1zuo_A 99 DNFPFDPPFVRVVLP-VLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKG 156 (186)
T ss_dssp TTTTSSCCEEEEEES-CEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCeEEEeCC-ccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCC
Confidence 999999999999997 8999 69999999999996 78999999999999999999983
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.94 E-value=2.8e-28 Score=179.92 Aligned_cols=100 Identities=19% Similarity=0.364 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHHHhhCCCCCcEEe-ecCCceeEEEEEecCCCCCCCCC----------eEEEEEEcCCCCCCCCCeEE
Q 031319 13 SKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANE----------TFELQVDFPEHYPMEAPQVI 81 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpyegg----------~f~~~l~fp~~YP~~pP~v~ 81 (161)
...+.+||++|++.|++ ++. ..+|+..|.+++.||+||+|+|| .|.++|.||++||++||+|+
T Consensus 30 ~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~ 103 (172)
T 2z6o_A 30 RELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA 103 (172)
T ss_dssp THHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred cHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence 57789999999999998 233 56789999999999999999999 99999999999999999999
Q ss_pred EeCCCCcCccccCCCeeeeccCCC----CCCCcCCHHHHHH
Q 031319 82 FLPPAPLHPHIYSNGHICLDILYD----SWSPAMTVSSVCI 118 (161)
Q Consensus 82 f~tp~i~HPnI~~~G~iCl~~l~~----~W~p~~~i~~vl~ 118 (161)
|.++.+|||||+.+|+||+++|.. .|+|.++|.++|.
T Consensus 104 F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 104 VPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp CGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred eCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 999448999999999999999933 5669999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.79 E-value=2.9e-19 Score=132.48 Aligned_cols=113 Identities=20% Similarity=0.281 Sum_probs=86.9
Q ss_pred HHHHHHHHHHhhC-CCCCcEE--e-ecCCceeEEEEEecCCCCCCCCCe---EEEEEEcCCCCCCCCCeEEEeCC-----
Q 031319 18 NRLQKELVEWQVN-PPAGFKH--K-VTDNLQRWIIEVNGAPGTLYANET---FELQVDFPEHYPMEAPQVIFLPP----- 85 (161)
Q Consensus 18 ~RL~~El~~l~~~-~~~~~~~--~-~~~~~~~w~~~i~gp~~tpyegg~---f~~~l~fp~~YP~~pP~v~f~tp----- 85 (161)
+|..+|+.++.+. +.-.... . .+|....+.+.+.|.-.++|+||. |.+.|-||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 5566777776543 3222222 2 345556666777776668999999 88999999999999999977541
Q ss_pred -C---Cc-CccccCCCeeeeccCCCCCCC-cCCHHHHHHHHHHHhCCCCCCCC
Q 031319 86 -A---PL-HPHIYSNGHICLDILYDSWSP-AMTVSSVCISILSMLSSSTVKQR 132 (161)
Q Consensus 86 -~---i~-HPnI~~~G~iCl~~l~~~W~p-~~~i~~vl~~i~~ll~~~p~~~~ 132 (161)
+ |+ |||||.+|+||+++|. +|++ +.+|.+||.+|+++|.+ |+.++
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~e-p~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHE-PPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSC-CCCCC
T ss_pred ccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcC-CCCCC
Confidence 1 67 9999999999999995 6999 57999999999999999 77653
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.77 E-value=7e-20 Score=132.51 Aligned_cols=100 Identities=21% Similarity=0.374 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHHHHHhhCCCCCcEEeecCCceeEEEEEecCCCCCCCCC----------eEEEEEEcCCCCCCCCCeEEE
Q 031319 13 SKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANE----------TFELQVDFPEHYPMEAPQVIF 82 (161)
Q Consensus 13 ~~~a~~RL~~El~~l~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpyegg----------~f~~~l~fp~~YP~~pP~v~f 82 (161)
...+..||..|++.|.+ .+.. ..++-..|...+.||+||+|+|+ .|.++|.||.+||.+||.|+|
T Consensus 32 ~~~w~~RlkeEy~alI~----yv~~-nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~F 106 (168)
T 3kpa_A 32 GDKWTARLKEEYASLIT----YVEH-NKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIAL 106 (168)
T ss_dssp THHHHHHHHHHHHHHHH----HHHH-HHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred HHHHHHHHHHHHHHHHH----HHHh-cccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeec
Confidence 47799999999999864 2222 22233568889999999999999 899999999999999999999
Q ss_pred eCCCCcCccccCCCeeeeccCCC----CCCCcCCHHHHH
Q 031319 83 LPPAPLHPHIYSNGHICLDILYD----SWSPAMTVSSVC 117 (161)
Q Consensus 83 ~tp~i~HPnI~~~G~iCl~~l~~----~W~p~~~i~~vl 117 (161)
.+..++|||++.+|+||++++.. .=.|.++|.+.|
T Consensus 107 p~ldgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 107 PELEGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp GGGTTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred ccccCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 99558999999999999998721 124556777765
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.58 E-value=2.7e-15 Score=109.35 Aligned_cols=84 Identities=18% Similarity=0.376 Sum_probs=73.7
Q ss_pred cCCceeEEEEEecCCCCCCCCCeEEE--EEEcCCCCCCCCCeEEEeCC-----CCcCccccCCCeeeeccCCCCCCC-cC
Q 031319 40 TDNLQRWIIEVNGAPGTLYANETFEL--QVDFPEHYPMEAPQVIFLPP-----APLHPHIYSNGHICLDILYDSWSP-AM 111 (161)
Q Consensus 40 ~~~~~~w~~~i~gp~~tpyegg~f~~--~l~fp~~YP~~pP~v~f~tp-----~i~HPnI~~~G~iCl~~l~~~W~p-~~ 111 (161)
..+++.|.++|. .+|+|+.|.+ .|-||.+||++||.| |.+| ...|||||.+|+||++.|.+ |++ ..
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTC
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCC
Confidence 468999999998 4899999985 888999999999999 7776 13899999999999999965 987 77
Q ss_pred CHHHHHHHHHHHhCCCCC
Q 031319 112 TVSSVCISILSMLSSSTV 129 (161)
Q Consensus 112 ~i~~vl~~i~~ll~~~p~ 129 (161)
+|.+++..++++|.++|.
T Consensus 124 nL~~ll~~l~~~F~~epP 141 (146)
T 3obq_A 124 DLLGLIQVMIVVFGDEPP 141 (146)
T ss_dssp CHHHHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHhhCCC
Confidence 999999999999998653
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.01 E-value=0.03 Score=38.71 Aligned_cols=69 Identities=22% Similarity=0.309 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEeecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCC
Q 031319 16 ASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (161)
Q Consensus 16 a~~RL~~El~~l~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp 85 (161)
...+...|+..|..-=...+.+. .+....+.+.|..-.+..-+.-.+.+.|.||.+||..||.|...++
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~-~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~ 79 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL-SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQ 79 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC-CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc-cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEcC
Confidence 34556788888875322334332 2223555555553222222344788999999999999999987763
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.95 E-value=0.073 Score=39.72 Aligned_cols=83 Identities=19% Similarity=0.394 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhhCCCCCcE--EeecCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCccccCC
Q 031319 18 NRLQKELVEWQVNPPAGFK--HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSN 95 (161)
Q Consensus 18 ~RL~~El~~l~~~~~~~~~--~~~~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~~~ 95 (161)
.+|.+|+.+| |.. +..+.++....+.+..- .|....++|.++.+||.++|.+...-|..++
T Consensus 4 ~~li~Ei~~i------GW~~l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~~~~------ 66 (186)
T 3zqs_A 4 SSLIEEIGTL------GWDKLVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPVPFC------ 66 (186)
T ss_dssp CSHHHHHHHH------CGGGEEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSSCCC------
T ss_pred HHHHHHHHHh------CCceeeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCCCcc------
Confidence 3678888887 332 23456778888888743 4568999999999999999988887774332
Q ss_pred CeeeeccCCCCCCCcCCHHHHHHHHHHHhCC
Q 031319 96 GHICLDILYDSWSPAMTVSSVCISILSMLSS 126 (161)
Q Consensus 96 G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~ 126 (161)
-.|++..+|.+++.+.+.+|..
T Consensus 67 ---------~~w~~~ssL~~v~~qF~~~Le~ 88 (186)
T 3zqs_A 67 ---------ASWTPQSSLISIYSQFLAAIES 88 (186)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHHHHH
T ss_pred ---------cccCCCccHHHHHHHHHHHHHH
Confidence 2599999999999888877763
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.17 E-value=0.15 Score=35.04 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=55.6
Q ss_pred HHHHHHHHHhhCCCCCcEEeec---CCceeEEEEEecCCCCCC--CCCeEEEEEEcCCCCCCCCCeEEEeCCCCcCcccc
Q 031319 19 RLQKELVEWQVNPPAGFKHKVT---DNLQRWIIEVNGAPGTLY--ANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (161)
Q Consensus 19 RL~~El~~l~~~~~~~~~~~~~---~~~~~w~~~i~gp~~tpy--egg~f~~~l~fp~~YP~~pP~v~f~tp~i~HPnI~ 93 (161)
....|+..|..-=...+..... .....+.+.+..+.+..- ..-.+.+.|.||++||..+|.|...+++ ++.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~----~L~ 87 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPR----GLS 87 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEE----SSC
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCC----CCC
Confidence 5678888887532234444321 234455555653322111 1246789999999999999999887742 121
Q ss_pred C--CCeeeeccCCCCC--CCcC-CHHHHHHHHHHHhCC
Q 031319 94 S--NGHICLDILYDSW--SPAM-TVSSVCISILSMLSS 126 (161)
Q Consensus 94 ~--~G~iCl~~l~~~W--~p~~-~i~~vl~~i~~ll~~ 126 (161)
. -..+| +.|.+.| ..+. -|.+++..++..|.+
T Consensus 88 ~~~~~~L~-~~L~~~~~e~~G~~mif~lv~~lqe~l~~ 124 (128)
T 2day_A 88 DEQIHTIL-QVLGHVAKAGLGTAMLYELIEKGKEILSG 124 (128)
T ss_dssp HHHHHHHH-HHHHHHHHHTTTSCCHHHHHHHHHHHHCC
T ss_pred HHHHHHHH-HHHHHHHHHhCCCEEhHHHHHHHHHHHHh
Confidence 1 00111 1122223 2222 367777777777765
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.86 E-value=0.42 Score=33.22 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEeec-------CCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCC
Q 031319 16 ASNRLQKELVEWQVNPPAGFKHKVT-------DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (161)
Q Consensus 16 a~~RL~~El~~l~~~~~~~~~~~~~-------~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp 85 (161)
...+-..|+..|..-=...+.+... +....+.+.|.+..+ .-..-.+.+.|.+|.+||..+|.|.+.++
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 11 YYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred hHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 3455677888876532222332221 124567777764332 11234678999999999999999998774
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.70 E-value=0.18 Score=36.19 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=21.7
Q ss_pred eEEEEEEcCCCCCCCCCeEEEeCC
Q 031319 62 TFELQVDFPEHYPMEAPQVIFLPP 85 (161)
Q Consensus 62 ~f~~~l~fp~~YP~~pP~v~f~tp 85 (161)
.+.+.|.+|.+||..+|.|...++
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 789999999999999999987773
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.62 E-value=0.28 Score=34.02 Aligned_cols=69 Identities=20% Similarity=0.221 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEEeecC------CceeEEEEEecCCC-C-CCCCCeEEEEEEcCCCCCCCCCeEEEeC
Q 031319 15 IASNRLQKELVEWQVNPPAGFKHKVTD------NLQRWIIEVNGAPG-T-LYANETFELQVDFPEHYPMEAPQVIFLP 84 (161)
Q Consensus 15 ~a~~RL~~El~~l~~~~~~~~~~~~~~------~~~~w~~~i~gp~~-t-pyegg~f~~~l~fp~~YP~~pP~v~f~t 84 (161)
....+...|+..|..-=...+...... ......+.+. +.+ . .-..-.+.+.|.||.+||..+|.|....
T Consensus 10 ~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 10 SYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp CHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred chHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 334566788888775322334332211 1344555555 222 1 0012468899999999999999998754
No 62
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.67 E-value=0.4 Score=32.92 Aligned_cols=65 Identities=17% Similarity=0.163 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhC-CC-CCcEEee--cCCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeC
Q 031319 19 RLQKELVEWQVN-PP-AGFKHKV--TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (161)
Q Consensus 19 RL~~El~~l~~~-~~-~~~~~~~--~~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~t 84 (161)
....|+..|..- +. ..+.+.. ..+...+.+.+..... .=..-.+.+.|.+|.+||..+|.|...+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGF-MDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTT-TTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCC-CCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 356688777653 21 1333322 1234577777763221 1112468899999999999999886554
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=87.61 E-value=0.34 Score=34.46 Aligned_cols=24 Identities=25% Similarity=0.456 Sum_probs=21.4
Q ss_pred eEEEEEEcCCCCCCCCCeEEEeCC
Q 031319 62 TFELQVDFPEHYPMEAPQVIFLPP 85 (161)
Q Consensus 62 ~f~~~l~fp~~YP~~pP~v~f~tp 85 (161)
.+.+.|.+|.+||..||.|....+
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 578999999999999999988874
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=55.88 E-value=8.6 Score=18.53 Aligned_cols=21 Identities=43% Similarity=0.537 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCc
Q 031319 15 IASNRLQKELVEWQVNPPAGF 35 (161)
Q Consensus 15 ~a~~RL~~El~~l~~~~~~~~ 35 (161)
.-..||..|+...+.+|+.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 457899999999999888764
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=38.46 E-value=30 Score=25.83 Aligned_cols=26 Identities=15% Similarity=0.294 Sum_probs=22.5
Q ss_pred CCCeEEEEEEcCCCCCC-----CCCeEEEeC
Q 031319 59 ANETFELQVDFPEHYPM-----EAPQVIFLP 84 (161)
Q Consensus 59 egg~f~~~l~fp~~YP~-----~pP~v~f~t 84 (161)
+.|.|.|+-.+|--||. .||.|+|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 45889999999999998 789888865
No 66
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=31.71 E-value=31 Score=25.87 Aligned_cols=48 Identities=0% Similarity=-0.130 Sum_probs=25.2
Q ss_pred ccCCCeeeeccCCCCCCCcCCHHHHHHHHHHHhCCCCCCCCCCChhHHH
Q 031319 92 IYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYV 140 (161)
Q Consensus 92 I~~~G~iCl~~l~~~W~p~~~i~~vl~~i~~ll~~~p~~~~p~~~~~~~ 140 (161)
||++|.|-...+.......-+...+|..|+.+... .-..+|..+++-.
T Consensus 143 ID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~-~~~~~~~~~~~~~ 190 (224)
T 3keb_A 143 ADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQQ-AMAAEREAAEARQ 190 (224)
T ss_dssp ECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHHH-C------------
T ss_pred EcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhhc-ccccChhhhhhhh
Confidence 57789987655544444455788999998887665 4455555555433
No 67
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=28.69 E-value=1.7e+02 Score=21.21 Aligned_cols=43 Identities=19% Similarity=0.313 Sum_probs=31.1
Q ss_pred CCceeEEEEEecCCCCCCCCCeEEEEEEcCCCCCCCCCeEEEeCC
Q 031319 41 DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (161)
Q Consensus 41 ~~~~~w~~~i~gp~~tpyegg~f~~~l~fp~~YP~~pP~v~f~tp 85 (161)
+..+.|.|-+.|+.+.--..-+=++.+.+.+.||. |.-.+..|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 46789999999987654443445788888999975 66666554
No 68
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=23.51 E-value=45 Score=25.49 Aligned_cols=26 Identities=19% Similarity=0.337 Sum_probs=22.1
Q ss_pred CCCeEEEEEEcCCCCC-------CCCCeEEEeC
Q 031319 59 ANETFELQVDFPEHYP-------MEAPQVIFLP 84 (161)
Q Consensus 59 egg~f~~~l~fp~~YP-------~~pP~v~f~t 84 (161)
+.|.|.|+-.+|--|| ..||.|+|.-
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 3589999999999998 4789998865
No 69
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=22.16 E-value=49 Score=26.31 Aligned_cols=25 Identities=16% Similarity=0.298 Sum_probs=21.0
Q ss_pred CCeEEEEEEcCCCCC------------------CCCCeEEEeC
Q 031319 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (161)
Q Consensus 60 gg~f~~~l~fp~~YP------------------~~pP~v~f~t 84 (161)
.|.|.|+-.+|.-|| ..||-|+|.-
T Consensus 188 ~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~V 230 (312)
T 2xsu_A 188 NGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYFV 230 (312)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEEE
Confidence 488999999999998 5688888764
No 70
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=21.65 E-value=51 Score=25.13 Aligned_cols=25 Identities=12% Similarity=0.214 Sum_probs=22.1
Q ss_pred CCeEEEEEEcCCCCCC-------CCCeEEEeC
Q 031319 60 NETFELQVDFPEHYPM-------EAPQVIFLP 84 (161)
Q Consensus 60 gg~f~~~l~fp~~YP~-------~pP~v~f~t 84 (161)
.|.|.|+-.+|--||. .||.|+|.-
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~V 165 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFGI 165 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEEE
Confidence 4899999999999986 789998875
No 71
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=21.40 E-value=51 Score=26.16 Aligned_cols=25 Identities=16% Similarity=0.300 Sum_probs=21.1
Q ss_pred CCeEEEEEEcCCCCC------------------CCCCeEEEeC
Q 031319 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (161)
Q Consensus 60 gg~f~~~l~fp~~YP------------------~~pP~v~f~t 84 (161)
.|.|.|+-.+|.-|| ..||.|+|.-
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~V 226 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFFI 226 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEEE
Confidence 488999999999998 4688888864
No 72
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=21.12 E-value=53 Score=25.85 Aligned_cols=26 Identities=23% Similarity=0.478 Sum_probs=21.6
Q ss_pred CCCeEEEEEEcCCCCC------------------CCCCeEEEeC
Q 031319 59 ANETFELQVDFPEHYP------------------MEAPQVIFLP 84 (161)
Q Consensus 59 egg~f~~~l~fp~~YP------------------~~pP~v~f~t 84 (161)
+.|.|.|+-.+|.-|| ..||.|+|.-
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~V 226 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFMV 226 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEEE
Confidence 3588999999999998 4588888864
No 73
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=20.49 E-value=56 Score=25.68 Aligned_cols=25 Identities=24% Similarity=0.598 Sum_probs=21.1
Q ss_pred CCeEEEEEEcCCCCCC------------------CCCeEEEeC
Q 031319 60 NETFELQVDFPEHYPM------------------EAPQVIFLP 84 (161)
Q Consensus 60 gg~f~~~l~fp~~YP~------------------~pP~v~f~t 84 (161)
.|.|.|+=.+|.-||. .||.|+|.-
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~V 223 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFMI 223 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEEE
Confidence 4889999999999994 688888864
No 74
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=20.43 E-value=64 Score=23.84 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=21.1
Q ss_pred CeEEEEEEcCCCCCCC-----CCeEEEeC
Q 031319 61 ETFELQVDFPEHYPME-----APQVIFLP 84 (161)
Q Consensus 61 g~f~~~l~fp~~YP~~-----pP~v~f~t 84 (161)
|.|.|+-.+|--||.. ||.|+|.-
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~V 130 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINISL 130 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEEE
Confidence 8899999999999987 88887764
Done!