BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031323
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94JU3|CSN7_ARATH COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7
PE=1 SV=1
Length = 260
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/154 (77%), Positives = 134/154 (87%)
Query: 1 MDIEQRQAELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENS 60
MDIEQ+QAE+ID VK+AS K ALG +I+EATS PSLFAFSEILA+PN+A+ EGT +S
Sbjct: 1 MDIEQKQAEIIDQLVKRASTCKSEALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDS 60
Query: 61 KYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELD 120
YLD+LRLFAHGTW DYK NA LP L PDQ+LKLKQLTVLTLAE+NKVLPYD LM ELD
Sbjct: 61 VYLDLLRLFAHGTWGDYKCNATRLPHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELD 120
Query: 121 VTNVRELEDFLINECMYTGIVRGKLDQLRRCFEV 154
V+NVRELEDFLINECMY GIVRGKLDQL+RCFEV
Sbjct: 121 VSNVRELEDFLINECMYAGIVRGKLDQLKRCFEV 154
>sp|Q55BD5|CSN7_DICDI COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum
GN=csn7 PE=1 SV=1
Length = 259
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
Query: 11 IDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFA 70
+ FV A + KG A+ S+I +A + PS+F F E+L +PN+ + + TE Y D+L +FA
Sbjct: 14 LKQFVVLAKSSKGRAIVSIIEKALNHPSVFVFGELLDMPNVQQLKETEFKNYYDLLLIFA 73
Query: 71 HGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDF 130
+G++ DYKN LPQL P + KLKQLT++ L+ T+ V+PY L E++++TNVRELED
Sbjct: 74 YGSFIDYKNKKDSLPQLTPQMITKLKQLTIVFLSSTSNVIPYSVLQEQIEITNVRELEDL 133
Query: 131 LINECMYTGIVRGKLDQLRRCFEV 154
+I + +Y I++GKLDQ + E+
Sbjct: 134 II-DSIYQNIIKGKLDQKNKHLEI 156
>sp|Q2KI56|CSN7B_BOVIN COP9 signalosome complex subunit 7b OS=Bos taurus GN=COPS7B PE=2
SV=1
Length = 264
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 1 MDIEQR-QAELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTEN 59
M EQ+ + L++ F+ A G+AL ++I + P ++ F E+L + N+ E N
Sbjct: 1 MAGEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGAN 60
Query: 60 SKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEEL 119
+ YL +L LFA+GT+ DY N LP+L Q KLK LT+++LA K +PY L+++L
Sbjct: 61 AAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDL 120
Query: 120 DVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEV 154
++ N+RELED +I E +YT I++GKLDQ + EV
Sbjct: 121 EMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEV 154
>sp|Q9H9Q2|CSN7B_HUMAN COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1
SV=1
Length = 264
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 1 MDIEQR-QAELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTEN 59
M EQ+ + L++ F+ A G+AL ++I + P ++ F E+L + N+ E N
Sbjct: 1 MAGEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGAN 60
Query: 60 SKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEEL 119
+ YL +L LFA+GT+ DY N LP+L Q KLK LT+++LA K +PY L+++L
Sbjct: 61 AAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDL 120
Query: 120 DVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEV 154
++ N+RELED +I E +YT I++GKLDQ + EV
Sbjct: 121 EMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEV 154
>sp|Q8BV13|CSN7B_MOUSE COP9 signalosome complex subunit 7b OS=Mus musculus GN=Cops7b PE=1
SV=1
Length = 264
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 1 MDIEQR-QAELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTEN 59
M EQ+ + L++ F+ A G+AL ++I + P ++ F E+L + N+ E N
Sbjct: 1 MAGEQKPSSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGAN 60
Query: 60 SKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEEL 119
+ YL +L LFA+GT+ DY N LP+L Q KLK LT+++LA K +PY L+++L
Sbjct: 61 AAYLQLLNLFAYGTYPDYIANKESLPELSVAQQNKLKHLTIVSLASRMKCIPYSVLLKDL 120
Query: 120 DVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEV 154
++ N+RELED +I E +YT I++GKLDQ + EV
Sbjct: 121 EMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEV 154
>sp|Q5R762|CSN7A_PONAB COP9 signalosome complex subunit 7a OS=Pongo abelii GN=COPS7A PE=2
SV=1
Length = 275
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Query: 12 DHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAH 71
+ F+ A + KGAAL ++I + P ++ F E+L +PN+ E ++ + +L +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 72 GTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFL 131
GT++DY A +LP L Q KL+ L+V+TLA K +PY L+E L + NVR+LED +
Sbjct: 73 GTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLV 132
Query: 132 INECMYTGIVRGKLDQLRRCFEV 154
I E +Y ++RG LDQ + EV
Sbjct: 133 I-EAVYADVLRGSLDQRNQRLEV 154
>sp|Q9UBW8|CSN7A_HUMAN COP9 signalosome complex subunit 7a OS=Homo sapiens GN=COPS7A PE=1
SV=1
Length = 275
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Query: 12 DHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAH 71
+ F+ A + KGAAL ++I + P ++ F E+L +PN+ E ++ + +L +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 72 GTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFL 131
GT++DY A +LP L Q KL+ L+V+TLA K +PY L+E L + NVR+LED +
Sbjct: 73 GTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLV 132
Query: 132 INECMYTGIVRGKLDQLRRCFEV 154
I E +Y ++RG LDQ + EV
Sbjct: 133 I-EAVYADVLRGSLDQRNQRLEV 154
>sp|Q9CZ04|CSN7A_MOUSE COP9 signalosome complex subunit 7a OS=Mus musculus GN=Cops7a PE=1
SV=2
Length = 275
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Query: 12 DHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAH 71
+ F+ A + KGAAL ++I + P ++ F E+L +PN+ E ++ + +L +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 72 GTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFL 131
GT++DY A +LP L Q KL+ L+V+TLA K +PY L+E L + NVR+LED +
Sbjct: 73 GTYADYLAEARNLPPLTDAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLV 132
Query: 132 INECMYTGIVRGKLDQLRRCFEV 154
I E +Y ++RG LDQ + EV
Sbjct: 133 I-EAVYADVLRGSLDQRNQRLEV 154
>sp|Q9V4S8|CSN7_DROME COP9 signalosome complex subunit 7 OS=Drosophila melanogaster
GN=CSN7 PE=1 SV=2
Length = 278
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Query: 10 LIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLF 69
++ F A + GAAL VI +A P++F F E+LA P++ + + +SK+ + L LF
Sbjct: 19 FLEKFCVLAKSSTGAALLDVIRQALEAPNVFVFGELLAEPSVLQLKDGPDSKHFETLNLF 78
Query: 70 AHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELED 129
A+GT+ +Y+ +L P KL+ LT+++LA K +PY L+ EL++ NVR LED
Sbjct: 79 AYGTYKEYRAQPEKFIELTPAMQKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLED 138
Query: 130 FLINECMYTGIVRGKLDQLRRCFEV 154
+I E +Y I+ GKL Q R EV
Sbjct: 139 III-EAIYADIIHGKLFQNTRILEV 162
>sp|Q7SGS1|CSN7A_NEUCR COP9 signalosome complex subunit 7a OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=csn-7a PE=1 SV=1
Length = 417
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 24/163 (14%)
Query: 16 KQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGT-ENSKYLDMLRLFAHGTW 74
K A++ + AA ++ TS P+ F F+E+L P I E + E S YL +L++F+HGT+
Sbjct: 18 KSATSPRAAA--DLVTRVTSAPNTFIFTELLQTPQIQSLEYSHEFSSYLTLLQIFSHGTY 75
Query: 75 SDYKNNAGHLPQLVPDQVLKLKQLTVLTLA----------------ETNKVLP----YDE 114
+DY NA LP L DQ LKL+QL++LTL E N+ P Y
Sbjct: 76 ADYIANASALPALNDDQKLKLRQLSLLTLVANDGSNVPLDYDAMQRENNQAQPPNQSYAS 135
Query: 115 LMEELDVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVCTV 157
L L++++ RELE+ +I+ +Y G++ G+LD ++ +V
Sbjct: 136 LTRRLELSSARELEELVIS-AIYAGLIEGQLDPANEMVQINSV 177
>sp|P68395|CSN7_BRAOL COP9 signalosome complex subunit 7 (Fragments) OS=Brassica oleracea
GN=CSN7 PE=1 SV=1
Length = 71
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Query: 65 MLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNV 124
++RLFAHGTW DYK NA +PQL PDQ+ LKQLTVLTLAE+NK + + M E+D
Sbjct: 8 LVRLFAHGTWGDYKCNASRIPQLSPDQI--LKQLTVLTLAESNK--KWADNMSEIDKKEA 63
Query: 125 RE 126
E
Sbjct: 64 EE 65
>sp|Q00648|CSN7_EMENI COP9 signalosome complex subunit 7 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=csnG PE=1 SV=1
Length = 327
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 1 MD-IEQRQAELIDHFVKQASNQKGAA---LGSVIVEATSQPSLFAFSEILAVPNI----- 51
MD + R + + F+ + + + S+I ATS P + F+E+L P +
Sbjct: 1 MDQVHHRALDALQSFIALTDSSSATSPRYIASIITNATSSPHTYVFAELLERPAVQALRS 60
Query: 52 ----AEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETN 107
AEF+ YL +L +FA GTW DY+ +LP L +Q KL+ LT+L+LA T
Sbjct: 61 PDTPAEFQ-----SYLTLLEIFAWGTWQDYQQTP-NLPPLSEEQARKLRLLTLLSLASTI 114
Query: 108 KVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKL 145
K L Y+ LM L ++ ELE L+ +Y+ ++ G+L
Sbjct: 115 KPLTYEALMTSLSLSAPSELES-LVTTAIYSSLITGRL 151
>sp|A7SPX9|EIF3M_NEMVE Eukaryotic translation initiation factor 3 subunit M
OS=Nematostella vectensis GN=v1g192238 PE=3 SV=1
Length = 379
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 9 ELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRL 68
EL+ + + ++ S +V ++P++ IL++ +A +G +L++
Sbjct: 189 ELLSTYTDENASAAREDAKSCVVSCLTKPNVLIMDNILSLKPVAVLQG---DPIYQLLQI 245
Query: 69 FAHGTWSDYK----NNAGHLPQLVPDQVLKLKQLTVLTLAETNKV---LPYDELMEELDV 121
F G DYK +N + + + LK++ VLTL K + Y++L +L +
Sbjct: 246 FVSGDVQDYKKFYDSNTDFINSIGLSHEMNLKKMRVLTLMSIGKETDEISYEDLATKLGI 305
Query: 122 TNVRELEDFLINECMYTGIVRGKLDQLRRCFEVCTVLVR 160
++ E+E FLI E + TG+V+ +LDQ+ R + +V R
Sbjct: 306 SS-DEIEQFLI-EAIQTGLVKARLDQVHRKVIISSVAQR 342
>sp|Q94261|EIF3M_CAEEL COP9/Signalosome and eIF3 complex-shared subunit 1
OS=Caenorhabditis elegans GN=cif-1 PE=1 SV=1
Length = 390
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 7 QAELIDHFVKQASNQKGAALGS---------------VIVEATSQPSLFAFSEILAVPNI 51
+A L+D V QA+ A LG+ + A P F+F + + +
Sbjct: 178 RALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVRTAVVDPKSFSFDHLERLSAV 237
Query: 52 AEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVL--------KLKQLTVLTL 103
+ T + L LF GT DYK P+ V + + K++ LT+++L
Sbjct: 238 KALK-TSDPLMFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETILLKKIRLLTLMSL 296
Query: 104 AETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVCT 156
AE + DEL ++LD+ LE+F+I+ I GK++++ R V +
Sbjct: 297 AEEKNEISLDELAKQLDILADETLEEFVIDAIQVNAI-SGKINEMARTLIVSS 348
>sp|A8WQY8|EIF3M_CAEBR COP9/Signalosome and eIF3 complex-shared subunit 1
OS=Caenorhabditis briggsae GN=cif-1 PE=3 SV=1
Length = 390
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 6 RQAELIDHFVKQASNQKGAALGS---------------VIVEATSQPSLFAFSEILAVPN 50
+A L+D QA+ A LG+ + A P F+F + +
Sbjct: 177 HRALLVDQRADQAAKVMTALLGTYTEKDAATARDDAMECVRTAVVDPKSFSFDHLERLSA 236
Query: 51 IAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPD-----QVLKLKQ---LTVLT 102
+ + ++ + L LF GT DY+ P+ V D +V+ LK+ LT+++
Sbjct: 237 VKALKSSDPLMF-TALELFISGTLKDYQQFVAKNPKFVTDYLKVDEVILLKKIRLLTLMS 295
Query: 103 LAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
LAE + DEL ++LD+ LE+F+I+ I GK++++
Sbjct: 296 LAEEKNEIKLDELAKQLDIHADETLEEFVIDAIQVNAI-SGKINEM 340
>sp|B3MCZ5|EIF3M_DROAN Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
ananassae GN=Tango7 PE=3 SV=1
Length = 387
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE++ + +D L +EL +T E+E F+I E + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESSPEMTFDTLTKELQITE-DEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVCTVLVR 160
+LDQ R + + + R
Sbjct: 324 ARLDQANRKVHISSTMHR 341
>sp|B4MY75|EIF3M_DROWI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
willistoni GN=Tango7 PE=3 SV=1
Length = 387
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSEKLPAYVEFYEEHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+N + ++ L +EL +T E+E F+I E + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESNAEMSFEALTKELQITE-NEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVCTVLVR 160
+LDQ R + + + R
Sbjct: 324 ARLDQANRKVHISSTMHR 341
>sp|B4JW83|EIF3M_DROGR Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
grimshawi GN=Tango7 PE=3 SV=1
Length = 387
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+ + +D L +EL + N E+E F+I E + T +VR
Sbjct: 266 SQGLNHDQNMKKMRLLTFMQLAESYPEMSFDTLTKELQI-NDDEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVCTVLVR 160
+LDQ R + + + R
Sbjct: 324 ARLDQANRKVHISSTMHR 341
>sp|B4KT65|EIF3M_DROMO Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
mojavensis GN=Tango7 PE=3 SV=1
Length = 387
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+ + +D L +EL + N E+E F+I E + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESYPEMTFDTLTKELQI-NEDEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVCTVLVR 160
+LDQ R + + + R
Sbjct: 324 ARLDQANRKVHISSTMHR 341
>sp|Q7Q068|EIF3M_ANOGA Eukaryotic translation initiation factor 3 subunit M OS=Anopheles
gambiae GN=AGAP012281 PE=3 SV=2
Length = 385
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + + V
Sbjct: 211 IVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPSYLEFYKNHKEFVN 267
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ L+ + LAE+N + + +L +EL + E+E F+I E + T +VR
Sbjct: 268 SQGLNHEQNIKKMRLLSFMQLAESNSEMTFQQLQDELQIKE-EEVEPFII-EVLKTKLVR 325
Query: 143 GKLDQLRRCFEVCTVLVR 160
++DQ R + + + R
Sbjct: 326 ARMDQRARKVHISSTMHR 343
>sp|Q17D30|EIF3M_AEDAE Eukaryotic translation initiation factor 3 subunit M OS=Aedes
aegypti GN=AAEL004347 PE=3 SV=1
Length = 386
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + + V
Sbjct: 212 IVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPSYLQFYKNHKEFVN 268
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ L+ + LAE+N + + +L +EL + E+E F+I E + T +VR
Sbjct: 269 SQGLNHEQNIKKMRLLSFMQLAESNPEMTFQQLQDELQIGE-NEVEPFII-EVLKTKLVR 326
Query: 143 GKLDQLRRCFEVCTVLVR 160
++DQ R + + + R
Sbjct: 327 ARMDQKARKVHISSTMHR 344
>sp|Q5ZJ64|EIF3M_CHICK Eukaryotic translation initiation factor 3 subunit M OS=Gallus
gallus GN=EIF3M PE=2 SV=1
Length = 374
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 9 ELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRL 68
EL+ + + ++Q IV A P+ F F +LA+ + EG D+L +
Sbjct: 187 ELLGSYTEDNASQARVDAHRCIVRALKDPNTFLFDHLLALKPVKFLEG---ELIHDLLTI 243
Query: 69 FAHGTWSD----YKNNAGHLPQ---LVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDV 121
F Y+NN + L + K++ LT + +A NK + +D + +EL +
Sbjct: 244 FVSAKLVSYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI 303
Query: 122 TNVRELEDFLINECMYTGIVRGKLDQLRR 150
++E F+I+ + T +V K+DQ +R
Sbjct: 304 -GADDVEAFVID-AVKTKMVYCKIDQTQR 330
>sp|Q4WG69|EIF3M_ASPFU Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=AFUA_7G03980 PE=3 SV=1
Length = 468
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A P++F F+ + A I + +S ++L +F T Y++ P +
Sbjct: 238 ALTSALKSPAVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLET 296
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL K++ LT+ +LA + ++ LPY + L V V ++E ++I+ +
Sbjct: 297 ISGGVLVDGAEALQTKMRLLTLASLAASTPSRSLPYTTIASALRVP-VEDVEKWVID-TI 354
Query: 137 YTGIVRGKLDQLRRCFEVCTVLVRL 161
G+V GKL QLR F V R+
Sbjct: 355 RAGLVEGKLSQLRSEFLVHRATYRV 379
>sp|B0YCA6|EIF3M_ASPFC Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=AFUB_089510 PE=3 SV=1
Length = 468
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A P++F F+ + A I + +S ++L +F T Y++ P +
Sbjct: 238 ALTSALKSPAVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLET 296
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL K++ LT+ +LA + ++ LPY + L V V ++E ++I+ +
Sbjct: 297 ISGGVLVDGAEALQTKMRLLTLASLAASTPSRSLPYTTIASALRVP-VEDVEKWVID-TI 354
Query: 137 YTGIVRGKLDQLRRCFEVCTVLVRL 161
G+V GKL QLR F V R+
Sbjct: 355 RAGLVEGKLSQLRSEFLVHRATYRV 379
>sp|Q5R8C4|EIF3M_PONAB Eukaryotic translation initiation factor 3 subunit M OS=Pongo
abelii GN=EIF3M PE=2 SV=1
Length = 374
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 9 ELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRL 68
EL+ + + ++Q IV A P+ F F +L + + EG D+L +
Sbjct: 187 ELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLTI 243
Query: 69 FAHGTWSD----YKNNAGHLPQLV---PDQVLKLKQLTVLTLAETNKVLPYDELMEELDV 121
F + Y+NN + L + K++ LT + +A NK + +D + +EL +
Sbjct: 244 FVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI 303
Query: 122 TNVRELEDFLINECMYTGIVRGKLDQLRR 150
++E F+I+ + T +V K+DQ +R
Sbjct: 304 -GADDVEAFVID-AVRTKMVYCKIDQTQR 330
>sp|Q7L2H7|EIF3M_HUMAN Eukaryotic translation initiation factor 3 subunit M OS=Homo
sapiens GN=EIF3M PE=1 SV=1
Length = 374
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 9 ELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRL 68
EL+ + + ++Q IV A P+ F F +L + + EG D+L +
Sbjct: 187 ELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLTI 243
Query: 69 FAHGTWSD----YKNNAGHLPQLV---PDQVLKLKQLTVLTLAETNKVLPYDELMEELDV 121
F + Y+NN + L + K++ LT + +A NK + +D + +EL +
Sbjct: 244 FVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI 303
Query: 122 TNVRELEDFLINECMYTGIVRGKLDQLRR 150
++E F+I+ + T +V K+DQ +R
Sbjct: 304 -GADDVEAFVID-AVRTKMVYCKIDQTQR 330
>sp|Q99JX4|EIF3M_MOUSE Eukaryotic translation initiation factor 3 subunit M OS=Mus
musculus GN=Eif3m PE=2 SV=1
Length = 374
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 9 ELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRL 68
EL+ + + ++Q IV A P+ F F +L + + EG D+L +
Sbjct: 187 ELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLTI 243
Query: 69 FAHGTWSD----YKNNAGHLPQLV---PDQVLKLKQLTVLTLAETNKVLPYDELMEELDV 121
F + Y+NN + L + K++ LT + +A NK + +D + +EL +
Sbjct: 244 FVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI 303
Query: 122 TNVRELEDFLINECMYTGIVRGKLDQLRR 150
++E F+I+ + T +V K+DQ +R
Sbjct: 304 -GADDVEAFVID-AVRTKMVYCKIDQTQR 330
>sp|B4LJT9|EIF3M_DROVI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
virilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+ + +D L +EL + E+E F+I E + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESYPEMTFDTLTKELQIGE-DEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVCTVLVR 160
+LDQ R + + + R
Sbjct: 324 ARLDQANRKVHISSTMHR 341
>sp|A1DC62|EIF3M_NEOFI Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=NFIA_024940 PE=3 SV=1
Length = 468
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A P +F F+ + A I + +S ++L +F T Y++ P +
Sbjct: 238 ALTSALKSPGVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLET 296
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL K++ LT+ +LA + ++ LPY + L V V ++E ++I+ +
Sbjct: 297 ISGGVLADGAEALQTKMRLLTLASLAASTPSRSLPYATIASALRVP-VEDVEKWVID-TI 354
Query: 137 YTGIVRGKLDQLRRCFEVCTVLVRL 161
G+V GKL QLR F V R+
Sbjct: 355 RAGLVEGKLSQLRSEFLVHRATYRV 379
>sp|Q3T148|EIF3M_BOVIN Eukaryotic translation initiation factor 3 subunit M OS=Bos taurus
GN=EIF3M PE=2 SV=2
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 9 ELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRL 68
EL+ + + ++Q IV A P+ F F +L + + EG D+L +
Sbjct: 187 ELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLTI 243
Query: 69 FAHGTWSD---YKNNAGHLPQLV---PDQVLKLKQLTVLTLAETNKVLPYDELMEELDVT 122
F + Y+NN + L + K++ LT + +A NK + +D + +EL +
Sbjct: 244 FVSAKLAYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI- 302
Query: 123 NVRELEDFLINECMYTGIVRGKLDQLRR 150
++E F+I+ + T +V K+DQ +R
Sbjct: 303 GADDVEAFVID-AVRTKMVYCKIDQTQR 329
>sp|A1CD85|EIF3M_ASPCL Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=ACLA_005680 PE=3 SV=1
Length = 471
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A P++F F+ + A I T +S ++L +F T Y++ P
Sbjct: 238 ALASALKSPAVFDFTSLTAADAIQALR-TSDSSLFELLEIFTADTLDAYEDFVAATPLAS 296
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL KL+ LT+ ++A + ++ LPY + L V ++E ++I+ +
Sbjct: 297 ISGGVLADAGEALQNKLRLLTLASIAASAPSRSLPYATIASALRVPT-EDVEKWVID-TI 354
Query: 137 YTGIVRGKLDQLRRCFEVCTVLVRL 161
G+V GKL QLR F V R+
Sbjct: 355 RAGLVEGKLSQLRSEFLVHRATYRV 379
>sp|Q0CPV5|EIF3M_ASPTN Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_04279
PE=3 SV=1
Length = 461
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A S P++F F+ + A + T +S ++L +F T Y+ P
Sbjct: 237 ALTSALSHPAVFDFTPLTASDAVQALR-TSDSTLFELLEIFTADTLDAYEAFVAATPLAS 295
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL K++ LT+ +LA + ++ LPY + L V ++E ++I+ +
Sbjct: 296 ISGGVLAPAADALQNKMRLLTLASLAASTPSRSLPYATIASALRVP-AEDVEKWVID-TI 353
Query: 137 YTGIVRGKLDQLRRCFEVCTVLVRL 161
G+V GKL QLR F V R+
Sbjct: 354 RAGLVEGKLSQLRSEFLVHRATYRV 378
>sp|B0WTN3|EIF3M_CULQU Eukaryotic translation initiation factor 3 subunit M OS=Culex
quinquefasciatus GN=CPIJ010525 PE=3 SV=1
Length = 386
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + + V
Sbjct: 212 IVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPAYLQFYQNHKEFVN 268
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ L+ + LAE+N + + +L +EL + ++E F+I E + T +VR
Sbjct: 269 SQGLNHEQNIKKMRLLSFMQLAESNPEMTFAQLQDELQIGE-NDVEPFII-EVLKTKLVR 326
Query: 143 GKLDQLRRCFEVCTVLVR 160
++DQ R + + + R
Sbjct: 327 ARMDQKARKVHISSTMHR 344
>sp|Q5DHT6|EIF3M_SCHJA Eukaryotic translation initiation factor 3 subunit M OS=Schistosoma
japonicum GN=SJCHGC06559 PE=2 SV=1
Length = 384
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 18 ASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDY 77
A N + A+ I+ P L + ++ A+ + EG D ++F G + +
Sbjct: 204 AVNARQNAI-KCIISVLQDPCLLSHDQLYALKPVQYLEG---EPVHDFFKIFVSGDLNTF 259
Query: 78 KNNAGHLPQLVPDQ-------VLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDF 130
KN P + V KL+ LT++ L+E L Y E +L + + ELE F
Sbjct: 260 KNFLAKHPNFLSHNNLSEEACVHKLRLLTLMQLSENVNELSYHEAATQLGL-KIEELEPF 318
Query: 131 LINECMYTGIVRGKLDQLRR 150
+I E + V KLDQ+++
Sbjct: 319 II-EAVRQRAVACKLDQVQK 337
>sp|Q2UDZ9|EIF3M_ASPOR Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=AO090026000816
PE=3 SV=1
Length = 466
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 17 QASNQKGAALG-SVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWS 75
QAS+++ L + A + P++F F+ + A + + +S ++L +F T
Sbjct: 226 QASSKEARDLAIRALTSALTHPAVFDFTPLTASDAVQALRSS-DSTLFELLEIFTADTLD 284
Query: 76 DYKNNAGHLP-QLVPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTN 123
Y+ P + VL K++ LT+ +LA + ++ LPY + L V
Sbjct: 285 AYEAFVTATPLAGISGGVLADAGEALQNKMRLLTLASLAASTPSRSLPYATIAASLRVP- 343
Query: 124 VRELEDFLINECMYTGIVRGKLDQLRRCFEVCTVLVRL 161
++E ++I+ + G+V GKL QLR F V R+
Sbjct: 344 AEDVEKWVID-TIRAGLVEGKLSQLRSEFLVHRATYRV 380
>sp|B0BN93|PSD13_RAT 26S proteasome non-ATPase regulatory subunit 13 OS=Rattus
norvegicus GN=Psmd13 PE=1 SV=1
Length = 376
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 12/133 (9%)
Query: 39 LFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHG---TWSDYKNNAGHLPQLVPDQVLKL 95
+F F E+L P + T+ +D L F G + K+ G P L ++ L
Sbjct: 210 VFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGDVDRFQTLKSAWGQQPDLAANEAQLL 269
Query: 96 KQLTVLTLAE-------TNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
+++ +L L E ++ L ++E+ + +T V ++E L+ + + G+VRG +D++
Sbjct: 270 RKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKIT-VNKVE-LLVMKALSVGLVRGSIDEV 327
Query: 149 RRCFEVCTVLVRL 161
+ + V R+
Sbjct: 328 DKRVHMTWVQPRV 340
>sp|Q0UXJ7|EIF3M_PHANO Eukaryotic translation initiation factor 3 subunit M
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=SNOG_03517 PE=3 SV=2
Length = 441
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 33 ATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQV 92
A + P+ F F ++ + +I + + + +L +F DY + V +
Sbjct: 232 ALTHPTHFDFQDLTDLDSIQALRNS-DPIFFQLLEIFNSDLLDDYNDFKDEHDGWVEESG 290
Query: 93 L-------KLKQLTVLTLAET---NKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
L K++ LT+ ++A + + LPYD++ + L +++ E+E ++I+ + G+V
Sbjct: 291 LDGAALNRKMRLLTLASMAASAGQTRSLPYDKIAKALQISS-EEVEMWVID-VIRAGLVE 348
Query: 143 GKLDQLRRCF 152
GKL QL + F
Sbjct: 349 GKLSQLNQTF 358
>sp|Q9WVJ2|PSD13_MOUSE 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus
GN=Psmd13 PE=1 SV=1
Length = 376
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 39 LFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDY---KNNAGHLPQLVPDQVLKL 95
+F F E+L P + T+ +D L F G + K G P L ++ L
Sbjct: 210 VFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGAVDRFQTLKCAWGQQPDLAANEAQLL 269
Query: 96 KQLTVLTLAE-------TNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
+++ +L L E ++ L ++E+ + +T V ++E L+ + + G+VRG +D++
Sbjct: 270 RKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKIT-VNKVE-LLVMKALSVGLVRGSIDEV 327
Query: 149 RRCFEVCTVLVRL 161
+ + V R+
Sbjct: 328 DKRVHMTWVQPRV 340
>sp|A4RK68|EIF3M_MAGO7 Eukaryotic translation initiation factor 3 subunit M OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=MGG_01595 PE=3 SV=1
Length = 432
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 33 ATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKN----NAGHLPQLV 88
A S P+ +F +I A+P + + Y +L++F DY + + G + +
Sbjct: 223 AISSPTRLSFEDIRALPAVHALSESHPVHY-QLLQIFGEQDLDDYDDFREEHEGFIEKEN 281
Query: 89 PDQVLKLKQLTVLTLAE------TNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
D + +++ +LT A + + Y+ + + L + + ++E + I+ + G+V
Sbjct: 282 LDNEVLYRKMRLLTFASLAAASMQTREISYNSITKALQIPS-EDVEMWAID-VIRAGLVE 339
Query: 143 GKLDQLRRCFEVCTVLVRL 161
GKL Q ++ F + +V R+
Sbjct: 340 GKLSQKKKVFLIHSVRYRV 358
>sp|Q6MDM0|RPOC_PARUW DNA-directed RNA polymerase subunit beta' OS=Protochlamydia
amoebophila (strain UWE25) GN=rpoC PE=3 SV=1
Length = 1388
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 43 SEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDY-KNNAGHLPQLVPDQVLKLKQLTVL 101
+EI + + +F G + +K + ++R G ++ ++ HL D V+K +QLT
Sbjct: 1155 AEIAKIDGVVDFRGVQKNKRIVVVRDEMTGMEEEHLISHTKHLIIQRGDHVVKGQQLT-- 1212
Query: 102 TLAETNKVLPYDELMEELDVTNVRELEDFLINE 134
V+P+ E LD+ VREL+ +L+N+
Sbjct: 1213 ----DGLVIPH----EILDICGVRELQKYLVNQ 1237
>sp|Q9YX47|VP4_FDVS Uncharacterized protein VP4 OS=Fiji disease virus (isolate
Sugarcane) GN=S4 PE=4 SV=1
Length = 1146
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 38 SLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWS 75
S F EI+ PN F G +N DMLR +HG WS
Sbjct: 624 SEFGIREIVK-PNSVLFLGAKNEPVGDMLRRLSHGLWS 660
>sp|Q5B5C1|EIF3M_EMENI Eukaryotic translation initiation factor 3 subunit M OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=AN4259 PE=3 SV=1
Length = 459
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKN--NAGHLPQ 86
+ A + P++F F+ + A + + ++ ++L +F T Y++ +A +
Sbjct: 238 ALTSALTHPAVFDFTPLTAADAVQALRSS-DAPLFELLEIFTADTLDAYEDFISATPVEN 296
Query: 87 LVPDQVLKLKQLTVLT-----------------LAETNKVLPYDELMEELDVTNVRELED 129
++PD L + T + + L Y+ + L V E+E
Sbjct: 297 ILPDNALAPHAEALQTKIRLLTLASLAAAATTTTGPSARSLSYETIASALRVPQ-EEVEK 355
Query: 130 FLINECMYTGIVRGKLDQLRRCFEVCTVLVRL 161
++I+ + G+V GKL QLR F V R+
Sbjct: 356 WVID-TIRAGLVEGKLSQLRSEFLVHRATYRV 386
>sp|Q2YXX1|SBCD_STAAB Nuclease SbcCD subunit D OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=sbcD PE=3 SV=1
Length = 373
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 88 VPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQ 147
+ D ++ LKQ+ TLA TN+ Y+ EE + + E +D I E Y I KL
Sbjct: 299 ITDPMMSLKQIYPNTLALTNETFNYN---EENNTIEISEKDDMSIIEMFYNHITDKKLSD 355
Query: 148 LR 149
++
Sbjct: 356 IQ 357
>sp|Q9PK79|RPOC_CHLMU DNA-directed RNA polymerase subunit beta' OS=Chlamydia muridarum
(strain MoPn / Nigg) GN=rpoC PE=3 SV=1
Length = 1396
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 43 SEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNN-AGHLPQLVPDQVLKLKQLTVL 101
++I + + +F+G + +K + ++R G ++ + HL D V+K +QLT
Sbjct: 1157 ADIAKIDGVVDFKGIQKNKRILVVRDEVTGMEEEHLISLTKHLIVQRGDSVIKGQQLT-- 1214
Query: 102 TLAETNKVLPYDELMEELDVTNVRELEDFLINE 134
V+P+ E L++ VREL+ +L+NE
Sbjct: 1215 ----DGLVVPH----EILEICGVRELQKYLVNE 1239
>sp|B1MXY4|UNG_LEUCK Uracil-DNA glycosylase OS=Leuconostoc citreum (strain KM20) GN=ung
PE=3 SV=1
Length = 219
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 70 AHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELED 129
+H TW+ Y N +L P+Q+ +KQ + E + P +++ L +T++ +
Sbjct: 4 SHTTWAPYINA-----KLTPEQINNIKQFLDVQYQEQSIFPPKEKVFAALSMTSLDHTKV 58
Query: 130 FLINECMYTGI 140
++ + Y G+
Sbjct: 59 VIMGQDPYHGL 69
>sp|O84316|RPOC_CHLTR DNA-directed RNA polymerase subunit beta' OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=rpoC PE=3 SV=1
Length = 1396
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 43 SEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNN-AGHLPQLVPDQVLKLKQLTVL 101
++I + + +F+G + +K + ++R G ++ + HL D V+K +QLT
Sbjct: 1157 ADIAKIDGVVDFKGIQKNKRILVVRDEITGMEEEHLISLTKHLIVQRGDSVIKGQQLT-- 1214
Query: 102 TLAETNKVLPYDELMEELDVTNVRELEDFLINE 134
V+P+ E L++ VREL+ +L+NE
Sbjct: 1215 ----DGLVVPH----EILEICGVRELQKYLVNE 1239
>sp|Q3KM48|RPOC_CHLTA DNA-directed RNA polymerase subunit beta' OS=Chlamydia trachomatis
serovar A (strain HAR-13 / ATCC VR-571B) GN=rpoC PE=3
SV=1
Length = 1396
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 43 SEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNN-AGHLPQLVPDQVLKLKQLTVL 101
++I + + +F+G + +K + ++R G ++ + HL D V+K +QLT
Sbjct: 1157 ADIAKIDGVVDFKGIQKNKRILVVRDEITGMEEEHLISLTKHLIVQRGDSVIKGQQLT-- 1214
Query: 102 TLAETNKVLPYDELMEELDVTNVRELEDFLINE 134
V+P+ E L++ VREL+ +L+NE
Sbjct: 1215 ----DGLVVPH----EILEICGVRELQKYLVNE 1239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,070,641
Number of Sequences: 539616
Number of extensions: 2181528
Number of successful extensions: 5553
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 5522
Number of HSP's gapped (non-prelim): 73
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)