Query 031325
Match_columns 161
No_of_seqs 147 out of 1146
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 20:03:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031325.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031325hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wy7_A Hypothetical protein PH 99.9 1.7E-23 5.8E-28 144.0 17.3 146 1-150 3-148 (207)
2 1ne2_A Hypothetical protein TA 99.9 6.6E-23 2.3E-27 140.4 14.5 148 2-157 6-153 (200)
3 3p9n_A Possible methyltransfer 99.8 3.2E-19 1.1E-23 121.0 13.6 124 25-150 22-151 (189)
4 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.8E-18 6.3E-23 122.9 14.7 103 47-150 69-176 (261)
5 2ift_A Putative methylase HI07 99.8 5.9E-19 2E-23 121.0 9.6 113 31-149 39-160 (201)
6 3tma_A Methyltransferase; thum 99.8 1.6E-18 5.5E-23 128.2 12.1 122 34-155 189-320 (354)
7 3lpm_A Putative methyltransfer 99.8 4.2E-18 1.4E-22 120.9 12.3 106 45-150 45-174 (259)
8 1o9g_A RRNA methyltransferase; 99.8 1.5E-18 5.2E-23 122.6 9.8 121 30-150 33-212 (250)
9 2fhp_A Methylase, putative; al 99.8 5E-18 1.7E-22 114.6 11.9 101 47-150 43-152 (187)
10 2b3t_A Protein methyltransfera 99.8 8.8E-18 3E-22 120.3 13.7 121 29-150 91-236 (276)
11 1pjz_A Thiopurine S-methyltran 99.8 2.5E-18 8.6E-23 118.0 10.5 102 45-147 19-135 (203)
12 2fpo_A Methylase YHHF; structu 99.8 1.4E-17 4.7E-22 114.2 13.4 113 28-146 37-154 (202)
13 2f8l_A Hypothetical protein LM 99.8 3.9E-18 1.3E-22 125.7 11.1 129 19-147 101-251 (344)
14 3tm4_A TRNA (guanine N2-)-meth 99.8 1.1E-17 3.8E-22 124.5 13.5 110 29-143 203-322 (373)
15 3evz_A Methyltransferase; NYSG 99.8 1.7E-17 5.8E-22 115.6 13.6 104 47-150 54-177 (230)
16 3kkz_A Uncharacterized protein 99.8 8.7E-18 3E-22 119.6 11.8 103 46-151 44-149 (267)
17 3dmg_A Probable ribosomal RNA 99.8 2.8E-17 9.6E-22 122.5 14.5 118 32-150 215-338 (381)
18 2gb4_A Thiopurine S-methyltran 99.8 1.5E-17 5E-22 117.7 12.4 101 47-148 67-187 (252)
19 3m70_A Tellurite resistance pr 99.8 8.2E-18 2.8E-22 120.8 10.9 99 48-147 120-218 (286)
20 3mti_A RRNA methylase; SAM-dep 99.8 2.2E-17 7.5E-22 111.4 12.3 102 47-149 21-132 (185)
21 1nv8_A HEMK protein; class I a 99.7 2.6E-17 8.9E-22 118.4 13.0 121 29-150 104-247 (284)
22 2esr_A Methyltransferase; stru 99.7 1E-17 3.4E-22 112.3 9.5 102 46-150 29-136 (177)
23 3f4k_A Putative methyltransfer 99.7 3.8E-17 1.3E-21 115.5 12.8 103 46-151 44-149 (257)
24 2xvm_A Tellurite resistance pr 99.7 8E-17 2.7E-21 109.5 13.7 103 45-148 29-132 (199)
25 3bus_A REBM, methyltransferase 99.7 1.1E-16 3.9E-21 114.0 15.1 118 31-150 44-164 (273)
26 3jwh_A HEN1; methyltransferase 99.7 4.5E-17 1.5E-21 112.5 12.3 117 34-150 15-139 (217)
27 3hem_A Cyclopropane-fatty-acyl 99.7 1.2E-16 4.3E-21 115.6 15.1 117 31-150 55-181 (302)
28 1nkv_A Hypothetical protein YJ 99.7 8.3E-17 2.8E-21 113.7 13.7 113 36-150 24-138 (256)
29 3jwg_A HEN1, methyltransferase 99.7 4.1E-17 1.4E-21 112.9 11.9 117 34-150 15-139 (219)
30 4dzr_A Protein-(glutamine-N5) 99.7 2.2E-18 7.4E-23 118.5 5.3 118 30-147 11-159 (215)
31 3ofk_A Nodulation protein S; N 99.7 6.4E-17 2.2E-21 111.6 12.6 116 33-150 36-152 (216)
32 4dcm_A Ribosomal RNA large sub 99.7 6.9E-17 2.4E-21 120.2 13.5 107 41-147 215-329 (375)
33 2okc_A Type I restriction enzy 99.7 3.5E-17 1.2E-21 124.4 12.1 125 20-148 147-303 (445)
34 1dus_A MJ0882; hypothetical pr 99.7 1.3E-16 4.5E-21 107.8 13.8 108 41-150 45-155 (194)
35 1ws6_A Methyltransferase; stru 99.7 1E-16 3.4E-21 106.6 12.4 118 26-150 21-145 (171)
36 2ozv_A Hypothetical protein AT 99.7 7.1E-17 2.4E-21 114.7 12.4 105 45-149 33-167 (260)
37 1vl5_A Unknown conserved prote 99.7 1.1E-16 3.7E-21 113.5 13.3 107 41-150 30-138 (260)
38 1kpg_A CFA synthase;, cyclopro 99.7 2E-16 6.7E-21 113.6 14.8 117 31-150 47-166 (287)
39 2frn_A Hypothetical protein PH 99.7 3.8E-17 1.3E-21 117.2 10.9 97 48-150 125-223 (278)
40 3dlc_A Putative S-adenosyl-L-m 99.7 1.2E-16 4.1E-21 110.1 12.7 115 33-150 29-146 (219)
41 3e05_A Precorrin-6Y C5,15-meth 99.7 4.2E-16 1.4E-20 106.7 15.3 106 41-151 33-141 (204)
42 3ldg_A Putative uncharacterize 99.7 4.9E-17 1.7E-21 121.2 11.3 111 33-143 179-332 (384)
43 3ldu_A Putative methylase; str 99.7 5.1E-17 1.7E-21 121.3 11.4 111 33-143 180-333 (385)
44 3gdh_A Trimethylguanosine synt 99.7 2.2E-17 7.5E-22 115.9 8.8 92 31-126 64-157 (241)
45 1uwv_A 23S rRNA (uracil-5-)-me 99.7 1.7E-16 5.9E-21 120.2 14.0 121 28-154 266-393 (433)
46 3k0b_A Predicted N6-adenine-sp 99.7 7E-17 2.4E-21 120.8 11.6 95 32-126 185-320 (393)
47 3dtn_A Putative methyltransfer 99.7 1.7E-16 5.7E-21 110.8 12.7 112 38-150 33-146 (234)
48 1wzn_A SAM-dependent methyltra 99.7 3E-16 1E-20 110.6 14.1 114 36-150 29-143 (252)
49 2fk8_A Methoxy mycolic acid sy 99.7 4.3E-16 1.5E-20 113.5 15.2 116 32-150 74-192 (318)
50 3vc1_A Geranyl diphosphate 2-C 99.7 3.9E-16 1.3E-20 113.5 14.8 111 36-150 104-219 (312)
51 3k6r_A Putative transferase PH 99.7 1.7E-16 5.7E-21 113.4 12.6 96 48-149 125-222 (278)
52 3njr_A Precorrin-6Y methylase; 99.7 4.5E-16 1.5E-20 106.8 14.2 101 43-151 50-153 (204)
53 3eey_A Putative rRNA methylase 99.7 1.1E-16 3.6E-21 109.1 10.9 103 47-149 21-136 (197)
54 3lcc_A Putative methyl chlorid 99.7 1.3E-16 4.4E-21 111.5 11.3 102 48-150 66-169 (235)
55 1ve3_A Hypothetical protein PH 99.7 3.7E-16 1.3E-20 108.4 13.5 115 33-150 25-140 (227)
56 3hnr_A Probable methyltransfer 99.7 2E-16 7E-21 109.3 12.1 99 48-150 45-143 (220)
57 1yzh_A TRNA (guanine-N(7)-)-me 99.7 2.3E-16 7.7E-21 108.9 12.1 104 48-151 41-155 (214)
58 3q87_B N6 adenine specific DNA 99.7 2.2E-16 7.4E-21 105.5 11.4 105 28-144 5-116 (170)
59 4hg2_A Methyltransferase type 99.7 5.3E-17 1.8E-21 115.1 8.8 94 48-150 39-133 (257)
60 2y1w_A Histone-arginine methyl 99.7 5.2E-16 1.8E-20 114.6 14.3 114 36-150 38-153 (348)
61 3dh0_A SAM dependent methyltra 99.7 2.3E-16 7.9E-21 108.9 11.7 108 41-150 30-141 (219)
62 2qm3_A Predicted methyltransfe 99.7 3.6E-16 1.2E-20 116.4 13.4 120 19-144 144-269 (373)
63 3r0q_C Probable protein argini 99.7 5.6E-16 1.9E-20 115.5 14.4 118 33-151 48-168 (376)
64 2o57_A Putative sarcosine dime 99.7 5.9E-16 2E-20 111.7 14.1 116 32-150 62-185 (297)
65 2jjq_A Uncharacterized RNA met 99.7 5.1E-16 1.8E-20 117.2 14.2 120 26-154 271-391 (425)
66 3ujc_A Phosphoethanolamine N-m 99.7 1.9E-16 6.5E-21 112.2 11.0 115 35-150 42-157 (266)
67 1xxl_A YCGJ protein; structura 99.7 5.3E-16 1.8E-20 108.8 13.0 104 44-150 17-122 (239)
68 2fyt_A Protein arginine N-meth 99.7 8.4E-16 2.9E-20 113.1 14.6 111 38-149 54-168 (340)
69 3hm2_A Precorrin-6Y C5,15-meth 99.7 7.4E-16 2.5E-20 103.1 13.0 107 38-151 15-126 (178)
70 3dxy_A TRNA (guanine-N(7)-)-me 99.7 2.7E-16 9.1E-21 109.1 11.0 107 48-154 34-152 (218)
71 1xtp_A LMAJ004091AAA; SGPP, st 99.7 3.4E-16 1.1E-20 110.4 11.8 112 38-150 83-195 (254)
72 3g5l_A Putative S-adenosylmeth 99.7 9.1E-16 3.1E-20 108.2 13.9 108 39-150 35-143 (253)
73 2ex4_A Adrenal gland protein A 99.7 2.8E-16 9.7E-21 110.2 10.6 103 48-150 79-183 (241)
74 3iv6_A Putative Zn-dependent a 99.7 5E-16 1.7E-20 110.1 11.9 113 38-151 35-149 (261)
75 1y8c_A S-adenosylmethionine-de 99.7 3E-16 1E-20 109.9 10.6 102 48-150 37-140 (246)
76 3ajd_A Putative methyltransfer 99.7 4.5E-16 1.5E-20 111.4 11.6 106 45-150 80-209 (274)
77 3h2b_A SAM-dependent methyltra 99.7 8.4E-16 2.9E-20 105.0 12.5 97 49-150 42-139 (203)
78 3mgg_A Methyltransferase; NYSG 99.7 9.1E-16 3.1E-20 109.5 13.0 115 34-150 23-140 (276)
79 4htf_A S-adenosylmethionine-de 99.7 1.4E-15 4.9E-20 109.1 14.1 100 48-150 68-171 (285)
80 2yxd_A Probable cobalt-precorr 99.7 2.1E-15 7.1E-20 101.1 14.0 98 44-149 31-129 (183)
81 3fpf_A Mtnas, putative unchara 99.7 2.5E-15 8.5E-20 107.8 15.1 104 42-151 116-221 (298)
82 3lbf_A Protein-L-isoaspartate 99.7 1.7E-15 5.7E-20 104.1 13.7 105 37-150 66-172 (210)
83 3g5t_A Trans-aconitate 3-methy 99.7 3.2E-16 1.1E-20 113.2 10.3 101 47-150 35-147 (299)
84 3a27_A TYW2, uncharacterized p 99.7 1E-15 3.6E-20 109.4 12.8 100 46-151 117-220 (272)
85 2igt_A SAM dependent methyltra 99.7 8.2E-16 2.8E-20 112.7 12.5 97 48-145 153-265 (332)
86 2fca_A TRNA (guanine-N(7)-)-me 99.7 8.8E-16 3E-20 106.0 11.9 105 48-152 38-153 (213)
87 3c0k_A UPF0064 protein YCCW; P 99.7 1.1E-15 3.9E-20 114.5 13.4 105 48-152 220-341 (396)
88 3gu3_A Methyltransferase; alph 99.7 1.4E-15 4.8E-20 109.2 13.2 105 45-151 19-125 (284)
89 3ntv_A MW1564 protein; rossman 99.7 3.1E-15 1.1E-19 104.5 14.5 113 29-150 56-174 (232)
90 1zx0_A Guanidinoacetate N-meth 99.7 6.2E-16 2.1E-20 108.2 10.8 104 47-150 59-168 (236)
91 3g89_A Ribosomal RNA small sub 99.7 1E-15 3.5E-20 108.1 11.9 98 47-150 79-182 (249)
92 3grz_A L11 mtase, ribosomal pr 99.7 8.9E-16 3E-20 105.1 11.3 110 33-150 47-157 (205)
93 2yqz_A Hypothetical protein TT 99.7 2.7E-15 9.1E-20 106.2 14.1 119 29-150 19-139 (263)
94 3thr_A Glycine N-methyltransfe 99.7 5.7E-16 1.9E-20 111.5 10.8 104 47-151 56-174 (293)
95 3orh_A Guanidinoacetate N-meth 99.7 3.2E-16 1.1E-20 109.8 9.2 104 47-150 59-168 (236)
96 2kw5_A SLR1183 protein; struct 99.7 1.4E-15 4.8E-20 103.8 12.2 99 48-150 30-129 (202)
97 3htx_A HEN1; HEN1, small RNA m 99.7 1.2E-15 4.2E-20 121.4 13.3 119 31-150 704-832 (950)
98 3bt7_A TRNA (uracil-5-)-methyl 99.7 8.8E-16 3E-20 114.1 11.8 121 27-154 193-331 (369)
99 3g2m_A PCZA361.24; SAM-depende 99.7 6.3E-16 2.2E-20 111.7 10.8 103 48-151 82-189 (299)
100 3uwp_A Histone-lysine N-methyl 99.7 1.2E-15 3.9E-20 113.6 12.2 117 31-150 156-286 (438)
101 3q7e_A Protein arginine N-meth 99.7 1.6E-15 5.6E-20 111.9 13.0 103 47-150 65-171 (349)
102 1xdz_A Methyltransferase GIDB; 99.7 6E-16 2.1E-20 108.6 10.2 98 48-151 70-173 (240)
103 3b3j_A Histone-arginine methyl 99.7 4.9E-16 1.7E-20 118.9 10.5 115 35-150 145-261 (480)
104 2pjd_A Ribosomal RNA small sub 99.7 4.1E-16 1.4E-20 114.9 9.7 104 46-150 194-301 (343)
105 2p8j_A S-adenosylmethionine-de 99.7 8.7E-16 3E-20 105.3 10.7 102 48-150 23-126 (209)
106 3d2l_A SAM-dependent methyltra 99.7 1.7E-15 5.6E-20 106.1 12.1 101 48-150 33-135 (243)
107 3dr5_A Putative O-methyltransf 99.7 3.3E-15 1.1E-19 103.8 13.4 115 31-150 39-161 (221)
108 1ri5_A MRNA capping enzyme; me 99.7 1.8E-15 6E-20 108.9 11.9 104 47-150 63-172 (298)
109 3ocj_A Putative exported prote 99.6 6.4E-16 2.2E-20 112.1 9.5 105 46-150 116-225 (305)
110 2b78_A Hypothetical protein SM 99.6 1.3E-15 4.6E-20 113.7 11.5 101 47-147 211-326 (385)
111 1g6q_1 HnRNP arginine N-methyl 99.6 2.8E-15 9.7E-20 109.8 13.0 102 47-149 37-142 (328)
112 2p35_A Trans-aconitate 2-methy 99.6 3E-15 1E-19 105.8 12.6 110 35-150 20-130 (259)
113 1jsx_A Glucose-inhibited divis 99.6 3.1E-15 1.1E-19 102.5 12.4 97 48-150 65-163 (207)
114 3lkd_A Type I restriction-modi 99.6 6.1E-15 2.1E-19 114.2 15.3 130 19-148 192-354 (542)
115 3e23_A Uncharacterized protein 99.6 1.1E-15 3.7E-20 105.1 10.0 97 48-150 43-139 (211)
116 2nxc_A L11 mtase, ribosomal pr 99.6 1.7E-15 5.8E-20 107.3 11.1 98 47-150 119-216 (254)
117 2as0_A Hypothetical protein PH 99.6 1.1E-15 3.9E-20 114.5 10.7 101 48-148 217-331 (396)
118 3pfg_A N-methyltransferase; N, 99.6 2.1E-15 7E-20 107.0 11.6 111 33-150 37-149 (263)
119 3ou2_A SAM-dependent methyltra 99.6 2.4E-15 8.3E-20 103.5 11.6 100 46-150 44-144 (218)
120 3mb5_A SAM-dependent methyltra 99.6 3.7E-15 1.2E-19 105.3 12.6 106 39-151 84-193 (255)
121 2pxx_A Uncharacterized protein 99.6 1.2E-15 4.2E-20 104.7 9.9 103 47-150 41-157 (215)
122 4hc4_A Protein arginine N-meth 99.6 2.4E-15 8.3E-20 111.5 12.0 103 47-150 82-187 (376)
123 3ege_A Putative methyltransfer 99.6 6.7E-16 2.3E-20 109.6 8.7 104 36-148 22-126 (261)
124 3gru_A Dimethyladenosine trans 99.6 1E-15 3.5E-20 110.3 9.7 101 20-126 25-127 (295)
125 2p7i_A Hypothetical protein; p 99.6 2.5E-15 8.5E-20 105.3 11.5 98 47-150 41-139 (250)
126 2vdw_A Vaccinia virus capping 99.6 2.2E-15 7.4E-20 109.2 11.4 105 48-152 48-169 (302)
127 1l3i_A Precorrin-6Y methyltran 99.6 3.5E-15 1.2E-19 100.6 11.7 101 44-150 29-132 (192)
128 2ar0_A M.ecoki, type I restric 99.6 1.2E-15 4.2E-20 118.2 10.6 122 20-145 145-305 (541)
129 1ixk_A Methyltransferase; open 99.6 6.2E-15 2.1E-19 107.4 13.7 106 45-150 115-244 (315)
130 3sm3_A SAM-dependent methyltra 99.6 2.4E-15 8.4E-20 104.6 11.1 102 48-150 30-139 (235)
131 3duw_A OMT, O-methyltransferas 99.6 7.1E-15 2.4E-19 101.9 13.3 98 48-150 58-165 (223)
132 3tr6_A O-methyltransferase; ce 99.6 4.8E-15 1.6E-19 102.8 12.4 98 48-150 64-172 (225)
133 3ccf_A Cyclopropane-fatty-acyl 99.6 7.9E-16 2.7E-20 110.2 8.6 100 44-150 53-152 (279)
134 1fbn_A MJ fibrillarin homologu 99.6 6.7E-15 2.3E-19 102.6 13.1 105 41-150 67-176 (230)
135 2ih2_A Modification methylase 99.6 7.2E-16 2.5E-20 116.2 8.8 97 19-127 14-112 (421)
136 2h00_A Methyltransferase 10 do 99.6 3.7E-15 1.3E-19 105.3 11.8 95 33-127 48-154 (254)
137 3bkw_A MLL3908 protein, S-aden 99.6 4.8E-15 1.6E-19 103.7 12.1 105 42-150 37-142 (243)
138 1dl5_A Protein-L-isoaspartate 99.6 6.1E-15 2.1E-19 107.5 13.1 108 35-150 62-173 (317)
139 2h1r_A Dimethyladenosine trans 99.6 1.2E-15 4.3E-20 110.3 9.3 101 20-126 17-119 (299)
140 4dmg_A Putative uncharacterize 99.6 2E-15 6.9E-20 112.9 10.5 101 48-149 214-323 (393)
141 3fut_A Dimethyladenosine trans 99.6 2.1E-15 7.1E-20 107.5 10.1 97 22-126 25-123 (271)
142 4df3_A Fibrillarin-like rRNA/T 99.6 6.3E-15 2.2E-19 102.6 12.3 103 43-150 72-180 (233)
143 3tfw_A Putative O-methyltransf 99.6 1.3E-14 4.5E-19 102.3 13.9 98 48-150 63-168 (248)
144 1vbf_A 231AA long hypothetical 99.6 1.4E-14 4.7E-19 100.9 13.8 105 36-150 58-163 (231)
145 3u81_A Catechol O-methyltransf 99.6 4.2E-15 1.4E-19 103.1 11.0 117 28-151 42-169 (221)
146 3v97_A Ribosomal RNA large sub 99.6 4.5E-15 1.5E-19 118.2 12.4 103 48-150 539-655 (703)
147 2gs9_A Hypothetical protein TT 99.6 1.1E-14 3.9E-19 99.9 12.9 94 48-150 36-130 (211)
148 3g07_A 7SK snRNA methylphospha 99.6 1.3E-15 4.5E-20 109.9 8.3 103 48-150 46-218 (292)
149 1wxx_A TT1595, hypothetical pr 99.6 1.5E-15 5E-20 113.4 8.8 102 48-150 209-323 (382)
150 3l8d_A Methyltransferase; stru 99.6 9.2E-15 3.1E-19 102.3 12.3 98 48-150 53-151 (242)
151 3v97_A Ribosomal RNA large sub 99.6 6E-15 2E-19 117.5 12.5 94 33-126 175-316 (703)
152 1nt2_A Fibrillarin-like PRE-rR 99.6 1.4E-14 4.8E-19 99.8 12.5 101 45-150 54-159 (210)
153 1zq9_A Probable dimethyladenos 99.6 7.4E-15 2.5E-19 105.6 11.5 95 26-126 10-106 (285)
154 2yx1_A Hypothetical protein MJ 99.6 6.1E-15 2.1E-19 108.4 11.3 91 48-148 195-287 (336)
155 3r3h_A O-methyltransferase, SA 99.6 2.2E-15 7.4E-20 106.0 8.4 116 26-150 42-168 (242)
156 3bgv_A MRNA CAP guanine-N7 met 99.6 7.1E-15 2.4E-19 106.9 11.4 103 48-150 34-153 (313)
157 2yxe_A Protein-L-isoaspartate 99.6 2E-14 6.8E-19 99.0 13.1 105 38-150 67-175 (215)
158 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1E-14 3.5E-19 102.1 11.4 105 48-152 46-168 (235)
159 2gpy_A O-methyltransferase; st 99.6 2.6E-14 9E-19 99.7 13.2 115 27-150 37-158 (233)
160 1yb2_A Hypothetical protein TA 99.6 8.7E-15 3E-19 104.7 10.9 105 39-150 101-209 (275)
161 4fsd_A Arsenic methyltransfera 99.6 9.9E-15 3.4E-19 109.0 11.5 103 46-150 81-201 (383)
162 3tqs_A Ribosomal RNA small sub 99.6 4.5E-15 1.5E-19 105.0 8.8 94 25-125 10-108 (255)
163 2r6z_A UPF0341 protein in RSP 99.6 5E-15 1.7E-19 105.0 9.0 80 47-127 82-175 (258)
164 1sui_A Caffeoyl-COA O-methyltr 99.6 3E-14 1E-18 100.4 12.8 98 48-150 79-188 (247)
165 3bkx_A SAM-dependent methyltra 99.6 1.8E-14 6.2E-19 102.7 11.8 115 33-149 28-156 (275)
166 2pwy_A TRNA (adenine-N(1)-)-me 99.6 3.2E-14 1.1E-18 100.5 12.9 106 39-151 87-197 (258)
167 3dli_A Methyltransferase; PSI- 99.6 8.2E-15 2.8E-19 102.7 9.7 96 47-150 40-138 (240)
168 2yvl_A TRMI protein, hypotheti 99.6 3.9E-14 1.3E-18 99.5 13.2 103 40-150 83-188 (248)
169 3ggd_A SAM-dependent methyltra 99.6 2E-14 7E-19 100.8 11.7 98 47-147 55-158 (245)
170 3adn_A Spermidine synthase; am 99.6 9.5E-15 3.2E-19 105.4 10.0 105 48-152 83-198 (294)
171 3khk_A Type I restriction-modi 99.6 9.5E-15 3.3E-19 113.2 10.5 102 19-125 220-341 (544)
172 2vdv_E TRNA (guanine-N(7)-)-me 99.6 3.1E-14 1.1E-18 100.2 12.2 107 48-154 49-175 (246)
173 2avd_A Catechol-O-methyltransf 99.6 3.9E-14 1.3E-18 98.4 12.7 98 48-150 69-177 (229)
174 1o54_A SAM-dependent O-methylt 99.6 3.1E-14 1.1E-18 101.9 12.3 105 40-151 104-212 (277)
175 3cgg_A SAM-dependent methyltra 99.6 2.1E-14 7.1E-19 97.0 10.9 98 48-150 46-145 (195)
176 3lec_A NADB-rossmann superfami 99.6 8.7E-15 3E-19 101.6 9.0 99 48-150 21-123 (230)
177 3m4x_A NOL1/NOP2/SUN family pr 99.6 1.4E-14 4.7E-19 110.0 10.9 108 45-152 102-237 (456)
178 1i9g_A Hypothetical protein RV 99.6 3.1E-14 1.1E-18 101.8 12.2 107 38-151 89-202 (280)
179 3fzg_A 16S rRNA methylase; met 99.6 5E-15 1.7E-19 99.5 7.4 102 48-151 49-152 (200)
180 3gnl_A Uncharacterized protein 99.6 9.6E-15 3.3E-19 102.2 9.0 99 48-150 21-123 (244)
181 3kr9_A SAM-dependent methyltra 99.6 1.1E-14 3.6E-19 101.0 9.1 99 48-150 15-117 (225)
182 3c3y_A Pfomt, O-methyltransfer 99.6 5.9E-14 2E-18 98.3 12.9 98 48-150 70-179 (237)
183 3m6w_A RRNA methylase; rRNA me 99.6 2.7E-14 9.1E-19 108.6 11.8 108 45-152 98-232 (464)
184 3e8s_A Putative SAM dependent 99.6 4.8E-14 1.7E-18 97.4 12.3 95 47-150 51-150 (227)
185 1g8a_A Fibrillarin-like PRE-rR 99.6 6.8E-14 2.3E-18 97.2 13.0 101 45-150 70-176 (227)
186 1jg1_A PIMT;, protein-L-isoasp 99.6 3.9E-14 1.3E-18 99.0 11.7 104 39-150 82-187 (235)
187 2a14_A Indolethylamine N-methy 99.6 6.2E-15 2.1E-19 104.8 7.7 107 45-151 52-196 (263)
188 2ipx_A RRNA 2'-O-methyltransfe 99.6 5.3E-14 1.8E-18 98.2 12.2 101 44-149 73-179 (233)
189 2frx_A Hypothetical protein YE 99.6 2.4E-14 8.3E-19 109.5 11.2 102 48-149 117-243 (479)
190 1iy9_A Spermidine synthase; ro 99.6 3.7E-14 1.3E-18 101.5 11.4 105 48-152 75-189 (275)
191 2r3s_A Uncharacterized protein 99.6 6.1E-14 2.1E-18 102.7 12.5 111 39-150 154-269 (335)
192 3bxo_A N,N-dimethyltransferase 99.6 6.8E-14 2.3E-18 97.6 11.7 100 47-151 39-140 (239)
193 3ufb_A Type I restriction-modi 99.6 5.2E-14 1.8E-18 108.9 12.1 124 16-143 189-346 (530)
194 2b9e_A NOL1/NOP2/SUN domain fa 99.5 9.7E-14 3.3E-18 100.7 12.8 80 45-124 99-185 (309)
195 1u2z_A Histone-lysine N-methyl 99.5 1.4E-13 4.8E-18 103.8 13.9 112 37-151 231-358 (433)
196 3c3p_A Methyltransferase; NP_9 99.5 1.5E-13 5E-18 94.5 13.0 97 48-150 56-158 (210)
197 2hnk_A SAM-dependent O-methylt 99.5 1.7E-13 6E-18 95.9 13.6 115 27-150 43-179 (239)
198 3p2e_A 16S rRNA methylase; met 99.5 8.9E-15 3E-19 101.8 6.7 103 48-150 24-137 (225)
199 2avn_A Ubiquinone/menaquinone 99.5 8E-14 2.8E-18 98.8 11.8 96 48-150 54-150 (260)
200 1mjf_A Spermidine synthase; sp 99.5 3.5E-14 1.2E-18 101.9 10.0 103 48-151 75-192 (281)
201 1sqg_A SUN protein, FMU protei 99.5 4.8E-14 1.6E-18 106.7 11.2 105 45-149 243-371 (429)
202 1qam_A ERMC' methyltransferase 99.5 6.6E-14 2.3E-18 98.5 11.0 93 26-125 12-106 (244)
203 3cbg_A O-methyltransferase; cy 99.5 1.3E-13 4.3E-18 96.3 12.2 98 48-150 72-180 (232)
204 3mq2_A 16S rRNA methyltransfer 99.5 1.6E-14 5.6E-19 99.7 7.5 103 47-150 26-138 (218)
205 3m33_A Uncharacterized protein 99.5 4.2E-14 1.4E-18 98.3 9.4 90 47-149 47-139 (226)
206 3i9f_A Putative type 11 methyl 99.5 2.9E-14 9.8E-19 94.7 8.2 94 47-150 16-110 (170)
207 3gjy_A Spermidine synthase; AP 99.5 1E-13 3.4E-18 100.6 11.6 104 49-152 90-200 (317)
208 2dul_A N(2),N(2)-dimethylguano 99.5 8.7E-14 3E-18 103.5 11.6 97 48-150 47-164 (378)
209 3s1s_A Restriction endonucleas 99.5 1.9E-13 6.5E-18 108.7 13.9 107 19-125 290-411 (878)
210 2yxl_A PH0851 protein, 450AA l 99.5 2.1E-13 7.2E-18 103.8 13.7 105 45-149 256-386 (450)
211 1xj5_A Spermidine synthase 1; 99.5 3.5E-13 1.2E-17 98.8 14.3 105 47-151 119-234 (334)
212 3gwz_A MMCR; methyltransferase 99.5 3E-13 1E-17 100.5 14.1 111 38-150 192-305 (369)
213 1i1n_A Protein-L-isoaspartate 99.5 2.2E-13 7.5E-18 94.5 12.6 97 46-150 75-180 (226)
214 2b25_A Hypothetical protein; s 99.5 1.1E-13 3.6E-18 101.7 11.5 101 43-150 100-217 (336)
215 3id6_C Fibrillarin-like rRNA/T 99.5 2.9E-13 9.9E-18 94.4 13.1 100 45-150 73-179 (232)
216 1qzz_A RDMB, aclacinomycin-10- 99.5 1.6E-13 5.6E-18 101.9 12.6 109 40-150 174-285 (374)
217 4azs_A Methyltransferase WBDD; 99.5 6.9E-14 2.4E-18 109.2 10.8 81 48-129 66-150 (569)
218 2pbf_A Protein-L-isoaspartate 99.5 2.6E-13 8.9E-18 94.2 12.7 111 30-150 64-191 (227)
219 2i62_A Nicotinamide N-methyltr 99.5 4.3E-14 1.5E-18 100.0 8.8 106 45-150 53-196 (265)
220 3mcz_A O-methyltransferase; ad 99.5 1.1E-13 3.7E-18 102.1 11.2 110 40-150 170-285 (352)
221 2pt6_A Spermidine synthase; tr 99.5 5.7E-14 1.9E-18 102.6 9.5 104 48-151 116-229 (321)
222 3dp7_A SAM-dependent methyltra 99.5 3.1E-13 1.1E-17 100.2 13.6 102 48-150 179-285 (363)
223 2oyr_A UPF0341 protein YHIQ; a 99.5 1.5E-13 5.1E-18 97.2 11.2 82 44-126 82-177 (258)
224 1inl_A Spermidine synthase; be 99.5 8.9E-14 3.1E-18 100.5 10.0 105 48-152 90-205 (296)
225 3ll7_A Putative methyltransfer 99.5 2.6E-14 8.9E-19 106.9 7.2 77 48-125 93-175 (410)
226 3bwc_A Spermidine synthase; SA 99.5 1.4E-13 4.7E-18 99.8 10.7 105 47-151 94-209 (304)
227 1x19_A CRTF-related protein; m 99.5 3.7E-13 1.2E-17 99.6 13.2 109 38-148 180-291 (359)
228 3ftd_A Dimethyladenosine trans 99.5 5.7E-14 2E-18 99.1 8.4 93 26-125 13-107 (249)
229 3i53_A O-methyltransferase; CO 99.5 1.7E-13 5.9E-18 100.3 11.3 102 47-150 168-272 (332)
230 2i7c_A Spermidine synthase; tr 99.5 1.5E-13 5.3E-18 98.6 10.6 106 47-152 77-192 (283)
231 2qe6_A Uncharacterized protein 99.5 4.6E-13 1.6E-17 95.8 12.8 102 48-150 77-194 (274)
232 2o07_A Spermidine synthase; st 99.5 1E-13 3.4E-18 100.5 9.4 105 47-151 94-208 (304)
233 3uzu_A Ribosomal RNA small sub 99.5 5.4E-14 1.9E-18 100.7 7.9 95 23-125 21-126 (279)
234 3axs_A Probable N(2),N(2)-dime 99.5 1.3E-13 4.5E-18 102.8 10.2 115 30-150 32-158 (392)
235 2g72_A Phenylethanolamine N-me 99.5 8.8E-14 3E-18 100.0 8.8 104 47-150 70-213 (289)
236 1uir_A Polyamine aminopropyltr 99.5 1E-13 3.5E-18 100.9 9.0 104 48-151 77-194 (314)
237 1tw3_A COMT, carminomycin 4-O- 99.5 4.1E-13 1.4E-17 99.3 12.4 108 41-150 176-286 (360)
238 2b2c_A Spermidine synthase; be 99.5 1.2E-13 4.1E-18 100.5 8.9 105 48-152 108-222 (314)
239 3bzb_A Uncharacterized protein 99.5 1.1E-12 3.6E-17 94.2 13.8 108 33-143 64-191 (281)
240 1r18_A Protein-L-isoaspartate( 99.5 3E-13 1E-17 94.0 10.5 111 30-150 68-192 (227)
241 1m6y_A S-adenosyl-methyltransf 99.5 1.7E-13 5.8E-18 99.0 9.3 84 41-124 19-109 (301)
242 2ip2_A Probable phenazine-spec 99.5 2.7E-13 9.2E-18 99.3 10.4 110 38-150 158-270 (334)
243 1af7_A Chemotaxis receptor met 99.5 4.1E-13 1.4E-17 95.8 10.9 103 48-150 105-250 (274)
244 1qyr_A KSGA, high level kasuga 99.5 4.7E-14 1.6E-18 99.7 5.6 92 26-125 3-102 (252)
245 2aot_A HMT, histamine N-methyl 99.5 1.6E-13 5.5E-18 98.8 7.4 102 47-150 51-170 (292)
246 3cc8_A Putative methyltransfer 99.5 5.6E-13 1.9E-17 92.2 9.9 95 47-150 31-128 (230)
247 3frh_A 16S rRNA methylase; met 99.5 1.1E-12 3.7E-17 91.2 11.1 102 47-151 104-206 (253)
248 1yub_A Ermam, rRNA methyltrans 99.4 8.9E-15 3.1E-19 103.0 0.4 94 26-126 11-106 (245)
249 2bm8_A Cephalosporin hydroxyla 99.4 7.5E-13 2.6E-17 92.7 10.1 94 48-150 81-185 (236)
250 3lcv_B Sisomicin-gentamicin re 99.4 5.9E-13 2E-17 93.4 9.1 104 48-152 132-237 (281)
251 1vlm_A SAM-dependent methyltra 99.4 1.5E-12 5.1E-17 89.9 11.1 89 49-150 48-137 (219)
252 1ej0_A FTSJ; methyltransferase 99.4 1E-12 3.5E-17 87.3 9.5 95 46-150 20-134 (180)
253 4e2x_A TCAB9; kijanose, tetron 99.4 1.8E-13 6.2E-18 103.1 6.3 111 33-150 92-206 (416)
254 3hp7_A Hemolysin, putative; st 99.4 6.4E-13 2.2E-17 95.3 8.8 95 46-149 83-182 (291)
255 1p91_A Ribosomal RNA large sub 99.4 1.5E-12 5E-17 92.6 10.5 91 47-150 84-176 (269)
256 3dou_A Ribosomal RNA large sub 99.4 3.4E-12 1.2E-16 86.6 11.3 106 33-150 10-137 (191)
257 3opn_A Putative hemolysin; str 99.4 4.2E-13 1.4E-17 93.7 7.0 97 46-150 35-135 (232)
258 2plw_A Ribosomal RNA methyltra 99.4 5E-12 1.7E-16 86.0 11.4 93 47-150 21-152 (201)
259 2qfm_A Spermine synthase; sper 99.4 1.9E-12 6.6E-17 95.0 9.7 104 48-151 188-313 (364)
260 2cmg_A Spermidine synthase; tr 99.3 3.1E-12 1.1E-16 90.8 7.6 95 47-151 71-170 (262)
261 3lst_A CALO1 methyltransferase 99.3 3.7E-12 1.3E-16 93.9 8.0 107 39-150 175-284 (348)
262 2wa2_A Non-structural protein 99.3 4.5E-13 1.5E-17 95.8 2.3 97 45-146 79-185 (276)
263 2oxt_A Nucleoside-2'-O-methylt 99.3 5.7E-13 2E-17 94.8 2.6 102 44-150 70-183 (265)
264 3giw_A Protein of unknown func 99.3 2.8E-11 9.5E-16 86.0 10.2 103 49-151 79-199 (277)
265 2nyu_A Putative ribosomal RNA 99.3 3.5E-11 1.2E-15 81.4 10.3 95 46-151 20-144 (196)
266 4a6d_A Hydroxyindole O-methylt 99.3 4.8E-11 1.7E-15 88.1 11.6 108 40-149 171-280 (353)
267 1fp1_D Isoliquiritigenin 2'-O- 99.3 3.3E-11 1.1E-15 89.6 9.7 104 39-150 199-304 (372)
268 2zfu_A Nucleomethylin, cerebra 99.3 3.4E-11 1.2E-15 82.7 9.1 83 47-150 66-149 (215)
269 3reo_A (ISO)eugenol O-methyltr 99.3 3E-11 1E-15 89.7 9.4 103 40-150 194-298 (368)
270 2p41_A Type II methyltransfera 99.2 1.3E-11 4.5E-16 89.4 6.1 100 46-150 80-189 (305)
271 3p9c_A Caffeic acid O-methyltr 99.2 5.7E-11 2E-15 88.1 9.6 104 39-150 191-296 (364)
272 1fp2_A Isoflavone O-methyltran 99.2 3.3E-11 1.1E-15 88.9 7.0 95 48-150 188-286 (352)
273 3sso_A Methyltransferase; macr 99.2 7.5E-11 2.6E-15 87.7 7.8 92 48-150 216-322 (419)
274 2xyq_A Putative 2'-O-methyl tr 99.1 5.4E-10 1.8E-14 80.3 10.9 92 45-150 60-169 (290)
275 3o4f_A Spermidine synthase; am 99.1 1.1E-09 3.8E-14 78.5 11.7 107 47-153 82-199 (294)
276 4fzv_A Putative methyltransfer 99.1 9.9E-11 3.4E-15 86.4 6.3 111 45-155 145-290 (359)
277 1zg3_A Isoflavanone 4'-O-methy 99.1 1.5E-10 5.1E-15 85.6 7.0 95 48-150 193-291 (358)
278 4gqb_A Protein arginine N-meth 99.1 1.4E-10 4.7E-15 91.0 7.0 102 47-150 356-465 (637)
279 3cvo_A Methyltransferase-like 99.1 1.6E-08 5.4E-13 68.8 15.1 94 48-150 30-152 (202)
280 2k4m_A TR8_protein, UPF0146 pr 99.0 2.4E-09 8.2E-14 68.5 9.5 89 31-141 20-113 (153)
281 1wg8_A Predicted S-adenosylmet 99.0 1.3E-09 4.3E-14 77.4 8.3 85 37-125 11-101 (285)
282 2ld4_A Anamorsin; methyltransf 99.0 5.3E-10 1.8E-14 74.5 5.9 87 45-150 9-99 (176)
283 2oo3_A Protein involved in cat 99.0 6E-10 2E-14 79.1 5.9 100 48-151 91-198 (283)
284 2qy6_A UPF0209 protein YFCK; s 98.7 3.4E-08 1.2E-12 69.8 7.9 102 48-150 60-211 (257)
285 3ua3_A Protein arginine N-meth 98.7 5E-08 1.7E-12 77.0 9.5 101 49-150 410-532 (745)
286 2zig_A TTHA0409, putative modi 98.7 6.2E-08 2.1E-12 69.9 9.4 58 35-94 223-280 (297)
287 1i4w_A Mitochondrial replicati 98.7 7.6E-08 2.6E-12 70.8 9.1 116 20-138 28-166 (353)
288 2c7p_A Modification methylase 98.7 2.7E-07 9.3E-12 67.4 11.1 101 48-154 10-123 (327)
289 3c6k_A Spermine synthase; sper 98.7 6.2E-08 2.1E-12 71.6 7.6 104 48-151 205-330 (381)
290 3evf_A RNA-directed RNA polyme 98.7 1.6E-08 5.4E-13 71.4 4.1 118 32-151 59-183 (277)
291 3g7u_A Cytosine-specific methy 98.6 4.1E-07 1.4E-11 67.7 10.2 101 50-154 3-122 (376)
292 4auk_A Ribosomal RNA large sub 98.6 4E-07 1.4E-11 67.1 9.4 72 46-124 209-281 (375)
293 1g60_A Adenine-specific methyl 98.5 3.2E-07 1.1E-11 64.9 8.2 48 47-95 211-258 (260)
294 3gcz_A Polyprotein; flavivirus 98.5 3.6E-08 1.2E-12 69.7 3.1 117 32-151 75-200 (282)
295 1g55_A DNA cytosine methyltran 98.5 1.2E-07 4.2E-12 69.7 5.4 73 50-126 3-81 (343)
296 2wk1_A NOVP; transferase, O-me 98.4 2.8E-06 9.7E-11 60.7 10.5 102 47-152 105-244 (282)
297 3ubt_Y Modification methylase 98.4 3.3E-06 1.1E-10 61.6 10.5 99 51-154 2-113 (331)
298 3tka_A Ribosomal RNA small sub 98.4 7.3E-07 2.5E-11 64.8 6.4 87 35-124 44-139 (347)
299 3p8z_A Mtase, non-structural p 98.3 6E-07 2E-11 61.9 3.6 104 39-144 69-179 (267)
300 3eld_A Methyltransferase; flav 98.2 1.1E-06 3.9E-11 62.5 4.5 116 33-151 67-190 (300)
301 4h0n_A DNMT2; SAH binding, tra 98.2 1.3E-05 4.3E-10 58.7 10.0 73 50-126 4-82 (333)
302 1boo_A Protein (N-4 cytosine-s 98.2 6.1E-07 2.1E-11 65.4 2.8 63 47-110 251-313 (323)
303 2qrv_A DNA (cytosine-5)-methyl 98.2 7.3E-06 2.5E-10 59.0 8.0 75 48-126 15-96 (295)
304 3lkz_A Non-structural protein 98.1 1E-05 3.4E-10 57.7 6.7 106 35-143 82-194 (321)
305 3qv2_A 5-cytosine DNA methyltr 98.1 7.4E-06 2.5E-10 59.8 6.3 101 49-154 10-133 (327)
306 1eg2_A Modification methylase 98.0 2.7E-05 9.2E-10 56.6 7.4 48 47-95 241-291 (319)
307 3me5_A Cytosine-specific methy 97.9 1.9E-05 6.4E-10 60.5 6.0 76 50-126 89-182 (482)
308 2px2_A Genome polyprotein [con 97.9 1.6E-05 5.5E-10 55.6 5.0 114 34-150 60-181 (269)
309 3b5i_A S-adenosyl-L-methionine 97.8 0.00048 1.6E-08 51.1 12.3 79 49-127 53-164 (374)
310 3swr_A DNA (cytosine-5)-methyl 97.3 0.00079 2.7E-08 55.8 7.9 74 49-126 540-631 (1002)
311 4ft4_B DNA (cytosine-5)-methyl 97.2 0.003 1E-07 51.2 10.6 44 49-92 212-261 (784)
312 2efj_A 3,7-dimethylxanthine me 97.2 0.0029 1E-07 47.0 9.2 78 49-127 53-163 (384)
313 4dkj_A Cytosine-specific methy 97.2 0.00088 3E-08 50.2 6.3 45 49-93 10-60 (403)
314 2py6_A Methyltransferase FKBM; 97.1 0.0028 9.7E-08 47.6 8.4 47 47-93 225-274 (409)
315 3av4_A DNA (cytosine-5)-methyl 96.9 0.0041 1.4E-07 53.0 8.3 74 49-126 851-942 (1330)
316 1m6e_X S-adenosyl-L-methionnin 96.7 0.0036 1.2E-07 46.2 6.3 80 49-128 52-154 (359)
317 3r24_A NSP16, 2'-O-methyl tran 96.7 0.023 8E-07 40.7 10.0 105 34-151 94-216 (344)
318 3fwz_A Inner membrane protein 96.1 0.011 3.7E-07 37.4 5.0 64 50-122 8-80 (140)
319 1zkd_A DUF185; NESG, RPR58, st 95.9 0.13 4.3E-06 38.4 10.7 76 24-100 49-139 (387)
320 4fn4_A Short chain dehydrogena 95.7 0.08 2.7E-06 37.1 8.6 74 48-122 6-93 (254)
321 3vyw_A MNMC2; tRNA wobble urid 95.7 0.048 1.6E-06 39.3 7.5 104 48-152 96-226 (308)
322 3llv_A Exopolyphosphatase-rela 95.7 0.034 1.2E-06 34.8 6.1 65 49-122 6-79 (141)
323 1rjd_A PPM1P, carboxy methyl t 95.7 0.32 1.1E-05 35.4 11.8 100 48-148 97-229 (334)
324 4g81_D Putative hexonate dehyd 95.6 0.091 3.1E-06 36.8 8.4 76 47-123 7-96 (255)
325 3ucx_A Short chain dehydrogena 95.5 0.29 9.9E-06 34.0 11.0 74 47-121 9-96 (264)
326 1boo_A Protein (N-4 cytosine-s 95.5 0.018 6.1E-07 41.8 4.7 54 97-150 14-82 (323)
327 2zig_A TTHA0409, putative modi 95.5 0.018 6.2E-07 41.2 4.7 52 97-148 21-93 (297)
328 3tjr_A Short chain dehydrogena 95.3 0.31 1.1E-05 34.7 10.7 77 47-124 29-119 (301)
329 3gaf_A 7-alpha-hydroxysteroid 95.1 0.4 1.4E-05 33.2 10.5 75 48-123 11-99 (256)
330 3pxx_A Carveol dehydrogenase; 95.1 0.43 1.5E-05 33.4 10.8 77 47-124 8-110 (287)
331 3pvc_A TRNA 5-methylaminomethy 95.0 0.075 2.5E-06 42.5 7.3 104 48-151 58-210 (689)
332 3l4b_C TRKA K+ channel protien 94.9 0.085 2.9E-06 35.7 6.4 64 51-122 2-74 (218)
333 3o38_A Short chain dehydrogena 94.8 0.61 2.1E-05 32.3 10.9 77 47-124 20-112 (266)
334 1f8f_A Benzyl alcohol dehydrog 94.7 0.13 4.5E-06 37.7 7.4 92 42-146 184-283 (371)
335 2uyo_A Hypothetical protein ML 94.6 0.4 1.4E-05 34.5 9.6 99 50-150 104-216 (310)
336 2dph_A Formaldehyde dismutase; 94.5 0.11 3.9E-06 38.5 6.8 101 43-149 180-296 (398)
337 3uve_A Carveol dehydrogenase ( 94.5 0.77 2.6E-05 32.2 10.9 76 47-123 9-114 (286)
338 3t7c_A Carveol dehydrogenase; 94.5 0.8 2.7E-05 32.5 11.0 76 47-123 26-127 (299)
339 3l9w_A Glutathione-regulated p 94.4 0.04 1.4E-06 41.4 4.1 65 49-122 4-77 (413)
340 3sx2_A Putative 3-ketoacyl-(ac 94.3 0.84 2.9E-05 31.8 10.7 78 47-125 11-114 (278)
341 1ae1_A Tropinone reductase-I; 94.3 0.4 1.4E-05 33.5 9.0 74 48-123 20-109 (273)
342 3ps9_A TRNA 5-methylaminomethy 94.3 0.12 4.1E-06 41.1 6.9 103 49-151 67-218 (676)
343 1g60_A Adenine-specific methyl 94.2 0.026 9E-07 39.5 2.6 50 98-147 5-69 (260)
344 1eg2_A Modification methylase 94.2 0.051 1.7E-06 39.4 4.2 53 98-150 39-104 (319)
345 3tsc_A Putative oxidoreductase 94.2 0.95 3.3E-05 31.6 10.9 76 47-123 9-111 (277)
346 2ae2_A Protein (tropinone redu 94.1 0.43 1.5E-05 33.0 8.8 74 48-123 8-97 (260)
347 3h7a_A Short chain dehydrogena 94.1 0.29 9.8E-06 33.9 7.7 75 48-123 6-93 (252)
348 1kol_A Formaldehyde dehydrogen 93.9 0.23 8E-06 36.8 7.3 47 43-89 180-228 (398)
349 3qiv_A Short-chain dehydrogena 93.8 0.51 1.7E-05 32.4 8.6 74 48-123 8-96 (253)
350 3ic5_A Putative saccharopine d 93.8 0.28 9.4E-06 29.2 6.4 68 49-124 5-80 (118)
351 4f3n_A Uncharacterized ACR, CO 93.8 0.17 5.7E-06 38.2 6.3 71 23-93 108-188 (432)
352 1xkq_A Short-chain reductase f 93.7 1.2 4E-05 31.2 10.4 74 48-123 5-96 (280)
353 4fgs_A Probable dehydrogenase 93.6 1.1 3.8E-05 31.6 10.1 72 47-122 27-112 (273)
354 1id1_A Putative potassium chan 93.5 0.22 7.5E-06 31.6 5.9 67 50-122 4-80 (153)
355 3sju_A Keto reductase; short-c 93.5 0.54 1.8E-05 33.0 8.3 74 48-123 23-111 (279)
356 1pl8_A Human sorbitol dehydrog 93.4 0.3 1E-05 35.7 7.1 89 43-144 166-265 (356)
357 3imf_A Short chain dehydrogena 93.4 0.49 1.7E-05 32.7 8.0 73 48-122 5-92 (257)
358 3rih_A Short chain dehydrogena 93.4 0.85 2.9E-05 32.3 9.3 74 48-123 40-129 (293)
359 3v8b_A Putative dehydrogenase, 93.4 0.59 2E-05 32.9 8.4 74 48-123 27-115 (283)
360 3lyl_A 3-oxoacyl-(acyl-carrier 93.4 0.62 2.1E-05 31.8 8.4 75 48-124 4-93 (247)
361 3rkr_A Short chain oxidoreduct 93.3 0.56 1.9E-05 32.5 8.2 74 48-123 28-116 (262)
362 3tfo_A Putative 3-oxoacyl-(acy 93.3 0.58 2E-05 32.7 8.2 74 48-123 3-91 (264)
363 1xhl_A Short-chain dehydrogena 93.2 1.4 4.6E-05 31.3 10.2 74 48-123 25-116 (297)
364 2dpm_A M.dpnii 1, protein (ade 93.2 0.2 6.8E-06 35.7 5.7 41 81-125 156-199 (284)
365 3s2e_A Zinc-containing alcohol 93.2 0.41 1.4E-05 34.6 7.5 94 42-149 160-260 (340)
366 3lf2_A Short chain oxidoreduct 93.2 1.4 4.9E-05 30.4 10.9 75 48-123 7-97 (265)
367 3ius_A Uncharacterized conserv 93.1 1.5 5E-05 30.5 11.0 65 50-124 6-74 (286)
368 4hp8_A 2-deoxy-D-gluconate 3-d 93.1 1.5 5.1E-05 30.5 11.5 73 47-122 7-88 (247)
369 3jyo_A Quinate/shikimate dehyd 93.0 0.74 2.5E-05 32.7 8.4 80 46-125 124-206 (283)
370 3r1i_A Short-chain type dehydr 92.9 0.6 2.1E-05 32.7 7.9 76 47-123 30-119 (276)
371 3fpc_A NADP-dependent alcohol 92.9 0.39 1.3E-05 34.9 7.0 49 42-90 160-210 (352)
372 3ftp_A 3-oxoacyl-[acyl-carrier 92.7 0.76 2.6E-05 32.1 8.1 74 48-123 27-115 (270)
373 1jw9_B Molybdopterin biosynthe 92.7 0.56 1.9E-05 32.6 7.3 74 49-122 31-130 (249)
374 4imr_A 3-oxoacyl-(acyl-carrier 92.5 0.56 1.9E-05 32.9 7.3 74 48-123 32-119 (275)
375 1yb1_A 17-beta-hydroxysteroid 92.5 1.1 3.7E-05 31.2 8.7 75 47-123 29-118 (272)
376 2g1u_A Hypothetical protein TM 92.5 0.5 1.7E-05 30.0 6.5 67 48-122 18-93 (155)
377 3pgx_A Carveol dehydrogenase; 92.5 1.2 4E-05 31.2 9.0 76 47-123 13-115 (280)
378 1zem_A Xylitol dehydrogenase; 92.5 1.1 3.9E-05 30.9 8.8 74 48-123 6-94 (262)
379 1p0f_A NADP-dependent alcohol 92.5 0.39 1.3E-05 35.2 6.6 47 43-89 186-234 (373)
380 3svt_A Short-chain type dehydr 92.5 1.1 3.6E-05 31.4 8.7 75 48-123 10-101 (281)
381 3awd_A GOX2181, putative polyo 92.5 1.1 3.7E-05 30.8 8.6 74 48-123 12-100 (260)
382 2jah_A Clavulanic acid dehydro 92.4 1.1 3.8E-05 30.7 8.6 74 48-123 6-94 (247)
383 3gvc_A Oxidoreductase, probabl 92.4 2 6.7E-05 30.1 10.1 72 48-123 28-113 (277)
384 3tos_A CALS11; methyltransfera 92.4 2 6.8E-05 30.1 11.3 100 49-152 70-217 (257)
385 3m6i_A L-arabinitol 4-dehydrog 92.3 0.47 1.6E-05 34.6 6.8 92 42-144 173-275 (363)
386 2vz8_A Fatty acid synthase; tr 92.3 0.062 2.1E-06 49.0 2.4 99 48-150 1240-1346(2512)
387 4egf_A L-xylulose reductase; s 92.3 1.1 3.7E-05 31.2 8.4 74 48-123 19-108 (266)
388 3uko_A Alcohol dehydrogenase c 92.2 0.32 1.1E-05 35.8 5.9 96 42-150 187-294 (378)
389 2rhc_B Actinorhodin polyketide 92.2 1.2 4.1E-05 31.1 8.7 74 48-123 21-109 (277)
390 4ibo_A Gluconate dehydrogenase 92.2 0.51 1.7E-05 33.0 6.7 74 48-123 25-113 (271)
391 3pk0_A Short-chain dehydrogena 92.1 1.1 3.8E-05 31.0 8.3 74 48-123 9-98 (262)
392 3ioy_A Short-chain dehydrogena 92.1 1.3 4.3E-05 31.8 8.8 75 48-123 7-97 (319)
393 3rwb_A TPLDH, pyridoxal 4-dehy 92.1 2 6.7E-05 29.5 9.5 73 47-123 4-90 (247)
394 4eso_A Putative oxidoreductase 92.0 2.1 7.1E-05 29.5 10.4 73 47-123 6-92 (255)
395 1cdo_A Alcohol dehydrogenase; 92.0 0.48 1.6E-05 34.8 6.6 88 43-145 187-286 (374)
396 3o26_A Salutaridine reductase; 92.0 1.1 3.7E-05 31.6 8.3 75 48-124 11-102 (311)
397 2qq5_A DHRS1, dehydrogenase/re 92.0 1.1 3.8E-05 30.9 8.2 72 48-121 4-91 (260)
398 3tox_A Short chain dehydrogena 92.0 0.5 1.7E-05 33.3 6.5 74 48-122 7-94 (280)
399 3t4x_A Oxidoreductase, short c 92.0 0.81 2.8E-05 31.8 7.5 74 48-123 9-95 (267)
400 4fs3_A Enoyl-[acyl-carrier-pro 91.9 1.4 4.9E-05 30.4 8.7 76 47-123 4-96 (256)
401 4da9_A Short-chain dehydrogena 91.9 1.6 5.6E-05 30.5 9.1 76 47-123 27-117 (280)
402 2fzw_A Alcohol dehydrogenase c 91.8 0.55 1.9E-05 34.4 6.8 47 43-89 185-233 (373)
403 1e3i_A Alcohol dehydrogenase, 91.8 0.52 1.8E-05 34.6 6.6 47 43-89 190-238 (376)
404 2jhf_A Alcohol dehydrogenase E 91.7 0.54 1.8E-05 34.5 6.6 47 43-89 186-234 (374)
405 4ej6_A Putative zinc-binding d 91.7 0.68 2.3E-05 34.0 7.1 94 42-148 176-280 (370)
406 2z1n_A Dehydrogenase; reductas 91.7 1 3.6E-05 31.0 7.8 74 48-123 6-95 (260)
407 3cxt_A Dehydrogenase with diff 91.7 1.4 4.8E-05 31.1 8.5 74 48-123 33-121 (291)
408 2zat_A Dehydrogenase/reductase 91.6 1.6 5.4E-05 30.0 8.7 74 48-123 13-101 (260)
409 1iy8_A Levodione reductase; ox 91.6 1.5 5E-05 30.4 8.6 74 48-123 12-102 (267)
410 4g65_A TRK system potassium up 91.6 0.24 8.2E-06 37.7 4.7 65 50-121 4-76 (461)
411 3f9i_A 3-oxoacyl-[acyl-carrier 91.6 0.9 3.1E-05 31.0 7.3 72 47-123 12-94 (249)
412 3two_A Mannitol dehydrogenase; 91.4 0.51 1.8E-05 34.2 6.2 87 43-146 171-259 (348)
413 2hq1_A Glucose/ribitol dehydro 91.4 0.86 2.9E-05 31.0 7.1 74 48-123 4-93 (247)
414 1uuf_A YAHK, zinc-type alcohol 91.4 0.68 2.3E-05 34.0 6.8 45 44-89 190-236 (369)
415 4iin_A 3-ketoacyl-acyl carrier 91.4 1.5 5.3E-05 30.4 8.4 75 47-123 27-117 (271)
416 3l77_A Short-chain alcohol deh 91.3 1.7 5.9E-05 29.3 8.5 74 49-124 2-91 (235)
417 3ai3_A NADPH-sorbose reductase 91.2 1.8 6.1E-05 29.9 8.6 74 48-123 6-95 (263)
418 4b79_A PA4098, probable short- 91.2 0.83 2.8E-05 31.7 6.8 70 47-123 9-88 (242)
419 3rd5_A Mypaa.01249.C; ssgcid, 91.2 0.68 2.3E-05 32.6 6.5 72 47-123 14-96 (291)
420 3jv7_A ADH-A; dehydrogenase, n 91.1 0.56 1.9E-05 33.9 6.1 92 45-148 168-266 (345)
421 3ctm_A Carbonyl reductase; alc 91.1 0.61 2.1E-05 32.5 6.1 74 48-123 33-121 (279)
422 1vl8_A Gluconate 5-dehydrogena 91.0 2.1 7.3E-05 29.7 8.9 75 47-123 19-109 (267)
423 3oec_A Carveol dehydrogenase ( 91.0 1.8 6.2E-05 30.9 8.7 76 47-123 44-145 (317)
424 3edm_A Short chain dehydrogena 90.9 1.7 5.6E-05 30.1 8.2 75 47-122 6-95 (259)
425 2g1p_A DNA adenine methylase; 90.9 0.2 6.7E-06 35.6 3.4 79 79-161 143-236 (278)
426 4dmm_A 3-oxoacyl-[acyl-carrier 90.9 1.8 6.1E-05 30.1 8.4 75 48-124 27-117 (269)
427 3s55_A Putative short-chain de 90.9 2.3 7.9E-05 29.6 9.0 75 47-123 8-109 (281)
428 3oid_A Enoyl-[acyl-carrier-pro 90.8 1.6 5.6E-05 30.1 8.1 73 48-122 3-91 (258)
429 3lk7_A UDP-N-acetylmuramoylala 90.7 1.3 4.6E-05 33.4 8.1 74 48-124 8-83 (451)
430 1geg_A Acetoin reductase; SDR 90.6 2.1 7.3E-05 29.4 8.5 72 50-123 3-89 (256)
431 1yf3_A DNA adenine methylase; 90.6 0.46 1.6E-05 33.3 5.0 28 97-125 149-176 (259)
432 3ijr_A Oxidoreductase, short c 90.5 2.2 7.7E-05 30.0 8.7 73 48-122 46-134 (291)
433 1fmc_A 7 alpha-hydroxysteroid 90.5 1.8 6.3E-05 29.4 8.1 74 48-123 10-98 (255)
434 3uog_A Alcohol dehydrogenase; 90.4 0.99 3.4E-05 33.0 6.9 46 43-89 184-231 (363)
435 1e3j_A NADP(H)-dependent ketos 90.4 1.1 3.7E-05 32.6 7.1 46 43-89 163-210 (352)
436 3rku_A Oxidoreductase YMR226C; 90.4 1.7 5.7E-05 30.7 7.9 75 48-123 32-125 (287)
437 1xu9_A Corticosteroid 11-beta- 90.3 1.7 5.8E-05 30.4 7.9 71 48-120 27-113 (286)
438 3ip1_A Alcohol dehydrogenase, 90.3 0.77 2.6E-05 34.1 6.3 46 45-90 210-257 (404)
439 2uvd_A 3-oxoacyl-(acyl-carrier 90.2 2.2 7.6E-05 29.1 8.3 74 48-123 3-92 (246)
440 1wma_A Carbonyl reductase [NAD 90.2 2 7E-05 29.4 8.2 74 48-123 3-92 (276)
441 3c85_A Putative glutathione-re 90.2 1.3 4.4E-05 28.8 6.8 65 49-122 39-114 (183)
442 1xq1_A Putative tropinone redu 90.1 2.2 7.5E-05 29.3 8.3 74 48-123 13-102 (266)
443 2aef_A Calcium-gated potassium 90.1 0.49 1.7E-05 32.2 4.8 64 49-122 9-80 (234)
444 3nyw_A Putative oxidoreductase 90.1 2.3 7.7E-05 29.2 8.2 75 48-123 6-97 (250)
445 1e7w_A Pteridine reductase; di 90.0 2.3 7.9E-05 29.9 8.4 60 48-109 8-73 (291)
446 1w6u_A 2,4-dienoyl-COA reducta 89.8 2.5 8.4E-05 29.7 8.5 74 48-123 25-114 (302)
447 3a28_C L-2.3-butanediol dehydr 89.8 2.1 7.3E-05 29.4 8.0 73 49-123 2-91 (258)
448 3ged_A Short-chain dehydrogena 89.7 2.5 8.6E-05 29.3 8.1 68 50-122 3-84 (247)
449 2b4q_A Rhamnolipids biosynthes 89.6 1.6 5.3E-05 30.6 7.2 73 48-123 28-115 (276)
450 1yxm_A Pecra, peroxisomal tran 89.6 3.3 0.00011 29.1 9.0 73 48-122 17-109 (303)
451 1mxh_A Pteridine reductase 2; 89.4 2.3 7.8E-05 29.5 7.9 74 48-123 10-104 (276)
452 3kvo_A Hydroxysteroid dehydrog 89.4 3.6 0.00012 29.9 9.2 76 47-123 43-139 (346)
453 2c07_A 3-oxoacyl-(acyl-carrier 89.4 2.6 9E-05 29.4 8.3 74 48-123 43-131 (285)
454 4a2c_A Galactitol-1-phosphate 89.3 1.4 4.8E-05 31.7 7.0 49 41-89 153-203 (346)
455 1xg5_A ARPG836; short chain de 89.2 2.9 0.0001 29.0 8.4 74 48-123 31-121 (279)
456 3f1l_A Uncharacterized oxidore 89.2 2.5 8.4E-05 29.0 7.9 74 48-123 11-102 (252)
457 4dry_A 3-oxoacyl-[acyl-carrier 89.2 1.6 5.3E-05 30.7 6.9 74 48-123 32-121 (281)
458 3qlj_A Short chain dehydrogena 89.1 1.7 6E-05 31.0 7.3 74 48-123 26-124 (322)
459 1ja9_A 4HNR, 1,3,6,8-tetrahydr 89.0 2.8 9.4E-05 28.9 8.1 74 48-123 20-109 (274)
460 3i1j_A Oxidoreductase, short c 89.0 3.2 0.00011 28.2 8.3 74 48-123 13-104 (247)
461 3ew7_A LMO0794 protein; Q8Y8U8 88.9 3.6 0.00012 27.1 9.4 83 51-142 2-90 (221)
462 3uf0_A Short-chain dehydrogena 88.8 2.9 9.8E-05 29.2 8.1 75 47-123 29-116 (273)
463 3ppi_A 3-hydroxyacyl-COA dehyd 88.8 2.5 8.6E-05 29.4 7.8 68 48-120 29-110 (281)
464 4e12_A Diketoreductase; oxidor 88.7 3.5 0.00012 29.0 8.5 98 50-154 5-123 (283)
465 2qhx_A Pteridine reductase 1; 88.6 3.1 0.00011 29.9 8.4 60 48-109 45-110 (328)
466 3oig_A Enoyl-[acyl-carrier-pro 88.6 3.8 0.00013 28.2 8.6 76 48-124 6-98 (266)
467 1gee_A Glucose 1-dehydrogenase 88.6 2.9 9.9E-05 28.6 7.9 74 48-123 6-95 (261)
468 3afn_B Carbonyl reductase; alp 88.5 1.9 6.6E-05 29.3 7.0 74 48-123 6-95 (258)
469 3guy_A Short-chain dehydrogena 88.5 3 0.0001 28.0 7.8 69 51-124 3-83 (230)
470 3nzo_A UDP-N-acetylglucosamine 88.4 3.8 0.00013 30.3 8.9 78 48-126 34-125 (399)
471 2pnf_A 3-oxoacyl-[acyl-carrier 88.4 3.3 0.00011 28.0 8.1 74 48-123 6-95 (248)
472 3osu_A 3-oxoacyl-[acyl-carrier 88.3 3.7 0.00013 28.0 8.2 73 49-123 4-92 (246)
473 1hdc_A 3-alpha, 20 beta-hydrox 88.2 1.9 6.5E-05 29.6 6.8 71 48-123 4-89 (254)
474 2x9g_A PTR1, pteridine reducta 88.1 2.9 0.0001 29.2 7.8 74 48-123 22-116 (288)
475 3abi_A Putative uncharacterize 88.0 1.8 6.3E-05 31.6 6.9 82 49-144 16-103 (365)
476 3grk_A Enoyl-(acyl-carrier-pro 88.0 4.8 0.00017 28.3 8.9 75 47-123 29-119 (293)
477 1x1t_A D(-)-3-hydroxybutyrate 88.0 2.4 8.3E-05 29.1 7.2 74 48-123 3-93 (260)
478 2h6e_A ADH-4, D-arabinose 1-de 87.9 0.79 2.7E-05 33.2 4.8 88 45-146 168-263 (344)
479 1oaa_A Sepiapterin reductase; 87.8 2.7 9.2E-05 28.9 7.4 74 48-123 5-102 (259)
480 3sc4_A Short chain dehydrogena 87.8 2 6.9E-05 30.1 6.8 74 48-123 8-103 (285)
481 3l6e_A Oxidoreductase, short-c 87.8 4.1 0.00014 27.6 8.2 70 49-123 3-87 (235)
482 1lnq_A MTHK channels, potassiu 87.7 0.84 2.9E-05 32.9 4.9 63 50-122 116-186 (336)
483 4fc7_A Peroxisomal 2,4-dienoyl 87.7 3.3 0.00011 28.9 7.8 73 48-122 26-114 (277)
484 2dpo_A L-gulonate 3-dehydrogen 87.7 4.1 0.00014 29.3 8.4 98 50-154 7-125 (319)
485 1rjw_A ADH-HT, alcohol dehydro 87.7 2.4 8.2E-05 30.6 7.3 86 45-146 161-255 (339)
486 2bd0_A Sepiapterin reductase; 87.6 3.3 0.00011 27.9 7.7 73 50-123 3-96 (244)
487 1pqw_A Polyketide synthase; ro 87.5 0.99 3.4E-05 29.7 4.8 90 44-150 34-135 (198)
488 3gms_A Putative NADPH:quinone 87.4 1 3.5E-05 32.5 5.2 47 42-89 138-187 (340)
489 1piw_A Hypothetical zinc-type 87.4 1.2 4.2E-05 32.4 5.6 45 44-89 175-221 (360)
490 2cfc_A 2-(R)-hydroxypropyl-COM 87.4 3.5 0.00012 27.9 7.7 73 49-123 2-90 (250)
491 3r3s_A Oxidoreductase; structu 87.3 2.9 0.0001 29.4 7.4 74 48-123 48-138 (294)
492 2pd6_A Estradiol 17-beta-dehyd 87.3 2.9 9.9E-05 28.6 7.3 74 48-123 6-102 (264)
493 3op4_A 3-oxoacyl-[acyl-carrier 87.2 4.2 0.00014 27.7 8.1 71 48-123 8-93 (248)
494 1spx_A Short-chain reductase f 87.2 2.8 9.6E-05 29.1 7.2 74 48-123 5-96 (278)
495 3o8q_A Shikimate 5-dehydrogena 87.2 6.2 0.00021 27.9 10.7 74 46-124 123-198 (281)
496 3h8v_A Ubiquitin-like modifier 87.1 2.9 0.0001 29.8 7.2 59 48-106 35-115 (292)
497 4eez_A Alcohol dehydrogenase 1 87.1 2.5 8.5E-05 30.4 7.1 48 42-89 157-206 (348)
498 4gkb_A 3-oxoacyl-[acyl-carrier 86.9 3.1 0.00011 29.0 7.2 74 47-122 5-92 (258)
499 3is3_A 17BETA-hydroxysteroid d 86.9 4.7 0.00016 27.9 8.2 76 47-123 16-106 (270)
500 1v3u_A Leukotriene B4 12- hydr 86.8 2 7E-05 30.8 6.4 45 43-88 140-187 (333)
No 1
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.92 E-value=1.7e-23 Score=143.95 Aligned_cols=146 Identities=40% Similarity=0.669 Sum_probs=126.7
Q ss_pred ChhhhhhhhhcccccccCCcccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCC
Q 031325 1 MKLKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDID 80 (161)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~ 80 (161)
|++++++......+.|.+....+++|.++......++..+... ...++.+|||+|||+|.++..+++.+..+++|+|++
T Consensus 3 m~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~ 81 (207)
T 1wy7_A 3 TRKKELAIALSKLKGFKNPKVWLEQYRTPGNAASELLWLAYSL-GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVD 81 (207)
T ss_dssp -CCHHHHHHHHTSCCCSSCCGGGTCCCCCHHHHHHHHHHHHHT-TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESC
T ss_pred ccHHHHHHHHhhCcCCCCcccceeeecCchHHHHHHHHHHHHc-CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECC
Confidence 5677888888888899988888888999999988888776644 445778999999999999999999866689999999
Q ss_pred hHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 81 SDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+.+++.++++....++++.++++|+.+++ ..||+|++||||+.........+++.+.+.+ +.+|+++
T Consensus 82 ~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l-~~~~~~~ 148 (207)
T 1wy7_A 82 KEAVDVLIENLGEFKGKFKVFIGDVSEFN--SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS-DVVYSIH 148 (207)
T ss_dssp HHHHHHHHHHTGGGTTSEEEEESCGGGCC--CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC-SEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEECchHHcC--CCCCEEEEcCCCccccCCchHHHHHHHHHhc-CcEEEEE
Confidence 99999999999888878999999999874 3799999999999987777778999999988 5888888
No 2
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.90 E-value=6.6e-23 Score=140.38 Aligned_cols=148 Identities=36% Similarity=0.576 Sum_probs=113.3
Q ss_pred hhhhhhhhhcccccccCCcccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCCh
Q 031325 2 KLKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS 81 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~ 81 (161)
+.++++..+..++.|......+.++.++......++..+... ...++.+|||+|||+|.++..+++.+..+++|+|+++
T Consensus 6 ~~~~le~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~ 84 (200)
T 1ne2_A 6 IKNDLEIRLQKLQQQGNFKNYLEQYPTDASTAAYFLIEIYND-GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDP 84 (200)
T ss_dssp HHHHHHHHHHTSCCCC--------CCCCHHHHHHHHHHHHHH-TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCH
T ss_pred cHHHHHHHHHhcCCCCccccceeecCCCHHHHHHHHHHHHhc-CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCH
Confidence 456788888888999988999999999999998888776654 4557789999999999999999988666899999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEeccCcccc
Q 031325 82 DSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTSTREV 157 (161)
Q Consensus 82 ~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (161)
.+++.++++.. +++++++|+.+++ .+||+|++||||++........+++.+.+.+ +.+|++++.++..+
T Consensus 85 ~~~~~a~~~~~----~~~~~~~d~~~~~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~~~~ 153 (200)
T 1ne2_A 85 DAIETAKRNCG----GVNFMVADVSEIS--GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS-MWIYSIGNAKARDF 153 (200)
T ss_dssp HHHHHHHHHCT----TSEEEECCGGGCC--CCEEEEEECCCC-------CHHHHHHHHHHE-EEEEEEEEGGGHHH
T ss_pred HHHHHHHHhcC----CCEEEECcHHHCC--CCeeEEEECCCchhccCchhHHHHHHHHHhc-CcEEEEEcCchHHH
Confidence 99999999876 5899999999875 4799999999999987766778999999998 57888887665443
No 3
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.82 E-value=3.2e-19 Score=121.00 Aligned_cols=124 Identities=19% Similarity=0.267 Sum_probs=95.4
Q ss_pred CCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEc
Q 031325 25 QYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQC 103 (161)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~ 103 (161)
..+++..+.+.+...+... ...++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++++..++ +++++++
T Consensus 22 ~rp~~~~~~~~l~~~l~~~-~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 100 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTAR-RDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRG 100 (189)
T ss_dssp C---CHHHHHHHHHHHHHH-SCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEES
T ss_pred CccCcHHHHHHHHHHHHhc-cCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 3445556666666665543 2247789999999999999988887777999999999999999999999887 8999999
Q ss_pred ccccccC---CCcccEEEECCCCCCCCCCcchHHHHHHHh--hcCCcEEEEe
Q 031325 104 DIRNLEW---RGHVDTVVMNPPFGTRKKGVDMDFLSMALK--VASQAVYSLH 150 (161)
Q Consensus 104 d~~~~~~---~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 150 (161)
|+.+... ..+||+|++||||++. .....+.+..+.+ .+++++.++.
T Consensus 101 d~~~~~~~~~~~~fD~i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~ 151 (189)
T 3p9n_A 101 AVAAVVAAGTTSPVDLVLADPPYNVD-SADVDAILAALGTNGWTREGTVAVV 151 (189)
T ss_dssp CHHHHHHHCCSSCCSEEEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEE
T ss_pred cHHHHHhhccCCCccEEEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEE
Confidence 9988643 2389999999998864 2344578888888 8875444444
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.80 E-value=1.8e-18 Score=122.94 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=88.6
Q ss_pred CCCCeEEEecCCcchHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNP 121 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~ 121 (161)
.++.+|||+|||+|..+..+++. ...+|+|+|+|+.|++.|++++...+. +++++++|+.+++.. .||+|+++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~-~~d~v~~~~ 147 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE-NASMVVLNF 147 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC-SEEEEEEES
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc-ccccceeee
Confidence 47889999999999999999985 234899999999999999999988776 799999999998764 699999998
Q ss_pred CCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 122 PFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 122 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+++.........++++.+.|++++.++.
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii 176 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVL 176 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEE
Confidence 88887666666889999999997666554
No 5
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.79 E-value=5.9e-19 Score=120.96 Aligned_cols=113 Identities=15% Similarity=0.175 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEccccc
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRN 107 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~ 107 (161)
.+...+...+... .++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++...++ +++++++|+.+
T Consensus 39 ~~~~~l~~~l~~~---~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~ 115 (201)
T 2ift_A 39 RVKETLFNWLMPY---IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLD 115 (201)
T ss_dssp HHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHH
T ss_pred HHHHHHHHHHHHh---cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHH
Confidence 4444444444321 25689999999999999998777667999999999999999999998876 79999999988
Q ss_pred ccCC---Cc-ccEEEECCCCCCCCCCcchHHHHHH--HhhcCCcEEEE
Q 031325 108 LEWR---GH-VDTVVMNPPFGTRKKGVDMDFLSMA--LKVASQAVYSL 149 (161)
Q Consensus 108 ~~~~---~~-~D~i~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 149 (161)
.... .+ ||+|+++|||+ .......++.+ .+++++++.++
T Consensus 116 ~~~~~~~~~~fD~I~~~~~~~---~~~~~~~l~~~~~~~~LkpgG~l~ 160 (201)
T 2ift_A 116 FLKQPQNQPHFDVVFLDPPFH---FNLAEQAISLLCENNWLKPNALIY 160 (201)
T ss_dssp HTTSCCSSCCEEEEEECCCSS---SCHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHhhccCCCCCEEEECCCCC---CccHHHHHHHHHhcCccCCCcEEE
Confidence 6432 37 99999999986 24445677777 45576443333
No 6
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.78 E-value=1.6e-18 Score=128.22 Aligned_cols=122 Identities=28% Similarity=0.222 Sum_probs=93.3
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcC--CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC
Q 031325 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW 110 (161)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~ 110 (161)
..+...+.......++.+|||+|||+|.++++++..+ ...++|+|+|+.+++.|++|++..++ ++++.++|+.+++.
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 3344444444455578899999999999999999863 36999999999999999999999988 79999999999876
Q ss_pred CC-cccEEEECCCCCCCCCC------cchHHHHHHHhhcCCcEEEEeccCcc
Q 031325 111 RG-HVDTVVMNPPFGTRKKG------VDMDFLSMALKVASQAVYSLHKTSTR 155 (161)
Q Consensus 111 ~~-~~D~i~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (161)
.. .||+|++||||+..... .+..+++.+.+.+++++.++....+.
T Consensus 269 ~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 269 FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 44 78999999999875332 12578888999997544444433333
No 7
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.77 E-value=4.2e-18 Score=120.92 Aligned_cols=106 Identities=16% Similarity=0.234 Sum_probs=84.1
Q ss_pred CCC-CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC---CCcccEEE
Q 031325 45 GDV-SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW---RGHVDTVV 118 (161)
Q Consensus 45 ~~~-~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~---~~~~D~i~ 118 (161)
... ++.+|||+|||+|.++..+++++..+++|+|+++.+++.|++++...++ ++.++++|+.+... ..+||+|+
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 444 6789999999999999999998655999999999999999999999888 59999999998764 23899999
Q ss_pred ECCCCCCC-CC-----------------CcchHHHHHHHhhcCCcEEEEe
Q 031325 119 MNPPFGTR-KK-----------------GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 119 ~~~p~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+||||... .. .....+++.+.+.+++++.++.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 99999654 11 1123689999999985444433
No 8
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.77 E-value=1.5e-18 Score=122.57 Aligned_cols=121 Identities=26% Similarity=0.289 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhc---CC--c----
Q 031325 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADL---EL--D---- 97 (161)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~---~~~~v~~~D~~~~~~~~a~~~~~~~---~~--~---- 97 (161)
..++..++..+.......++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.|++++... ++ +
T Consensus 33 ~~la~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1o9g_A 33 VRLATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELER 112 (250)
T ss_dssp HHHHHHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhh
Confidence 3444467776666554446679999999999999999875 2459999999999999999988765 44 2
Q ss_pred ---------------------eE-------------EEEcccccccC-----CC-cccEEEECCCCCCCCC-------Cc
Q 031325 98 ---------------------ID-------------FVQCDIRNLEW-----RG-HVDTVVMNPPFGTRKK-------GV 130 (161)
Q Consensus 98 ---------------------~~-------------~~~~d~~~~~~-----~~-~~D~i~~~~p~~~~~~-------~~ 130 (161)
+. +.++|+.+... .. .||+|++||||..... ..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~ 192 (250)
T 1o9g_A 113 REQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQP 192 (250)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHH
T ss_pred hhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccH
Confidence 56 99999988542 33 8999999999976543 23
Q ss_pred chHHHHHHHhhcCCcEEEEe
Q 031325 131 DMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~ 150 (161)
...+++.+.+.++++++++.
T Consensus 193 ~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 193 VAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp HHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 45889999999985444444
No 9
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.77 E-value=5e-18 Score=114.55 Aligned_cols=101 Identities=19% Similarity=0.246 Sum_probs=80.7
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC-----CCcccEEEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW-----RGHVDTVVM 119 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-----~~~~D~i~~ 119 (161)
.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.+++++...++ +++++++|+.+... ..+||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 46789999999999999999887667999999999999999999988886 69999999987432 338999999
Q ss_pred CCCCCCCCCCcchHHHHHH--HhhcCCcEEEEe
Q 031325 120 NPPFGTRKKGVDMDFLSMA--LKVASQAVYSLH 150 (161)
Q Consensus 120 ~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 150 (161)
+|||+. ......+..+ .+.+++++.++.
T Consensus 123 ~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 123 DPPYAK---QEIVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp CCCGGG---CCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCCCc---hhHHHHHHHHHHhcccCCCCEEEE
Confidence 999873 2334566666 666774444443
No 10
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.77 E-value=8.8e-18 Score=120.29 Aligned_cols=121 Identities=19% Similarity=0.219 Sum_probs=94.8
Q ss_pred ChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccc
Q 031325 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIR 106 (161)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~ 106 (161)
+....+.++..+..... .++.+|||+|||+|.++..+++. +..+++++|+|+.+++.++++....++ ++.++++|+.
T Consensus 91 pr~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~ 169 (276)
T 2b3t_A 91 PRPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWF 169 (276)
T ss_dssp CCTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTT
T ss_pred cCchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchh
Confidence 34445666666666554 46779999999999999999964 456999999999999999999998887 7999999998
Q ss_pred cccCCCcccEEEECCCCCCCCC-----------------------CcchHHHHHHHhhcCCcEEEEe
Q 031325 107 NLEWRGHVDTVVMNPPFGTRKK-----------------------GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 107 ~~~~~~~~D~i~~~~p~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+.....+||+|++||||..... .....+++.+.+.++++++++.
T Consensus 170 ~~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~ 236 (276)
T 2b3t_A 170 SALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLL 236 (276)
T ss_dssp GGGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred hhcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 8543448999999999975422 1235678888888886555554
No 11
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.77 E-value=2.5e-18 Score=118.00 Aligned_cols=102 Identities=15% Similarity=0.083 Sum_probs=85.7
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhh-------------cCCceEEEEcccccccCC
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAAD-------------LELDIDFVQCDIRNLEWR 111 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~-------------~~~~~~~~~~d~~~~~~~ 111 (161)
...++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++... ...+++++++|+.+++..
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 444778999999999999999999876 999999999999999988653 123789999999998764
Q ss_pred --CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEE
Q 031325 112 --GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVY 147 (161)
Q Consensus 112 --~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (161)
.+||+|++...+++........+++++.+++++++.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 389999998888887655556799999999997654
No 12
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.77 E-value=1.4e-17 Score=114.23 Aligned_cols=113 Identities=17% Similarity=0.214 Sum_probs=85.1
Q ss_pred CChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccc
Q 031325 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIR 106 (161)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~ 106 (161)
+...+...+...+... .++.+|||+|||+|.+++.+++.+..+|+++|+|+.+++.++++++..++ +++++++|+.
T Consensus 37 ~~~~~~~~l~~~l~~~---~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~ 113 (202)
T 2fpo_A 37 TTDRVRETLFNWLAPV---IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM 113 (202)
T ss_dssp -CHHHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH
T ss_pred CHHHHHHHHHHHHHhh---cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHH
Confidence 3344444444444321 25689999999999999998877666999999999999999999998887 8999999998
Q ss_pred cc-cCC-CcccEEEECCCCCCCCCCcchHHHHHHHh--hcCCcE
Q 031325 107 NL-EWR-GHVDTVVMNPPFGTRKKGVDMDFLSMALK--VASQAV 146 (161)
Q Consensus 107 ~~-~~~-~~~D~i~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~ 146 (161)
+. +.. ..||+|+++|||+. ......++.+.+ ++++++
T Consensus 114 ~~~~~~~~~fD~V~~~~p~~~---~~~~~~l~~l~~~~~L~pgG 154 (202)
T 2fpo_A 114 SFLAQKGTPHNIVFVDPPFRR---GLLEETINLLEDNGWLADEA 154 (202)
T ss_dssp HHHSSCCCCEEEEEECCSSST---TTHHHHHHHHHHTTCEEEEE
T ss_pred HHHhhcCCCCCEEEECCCCCC---CcHHHHHHHHHhcCccCCCc
Confidence 74 332 38999999999873 344467777765 366433
No 13
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.76 E-value=3.9e-18 Score=125.74 Aligned_cols=129 Identities=17% Similarity=0.167 Sum_probs=97.8
Q ss_pred CcccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcC-C-----CeEEEEeCChHHHHHHHHHHh
Q 031325 19 PKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-A-----DQVIAIDIDSDSLELASENAA 92 (161)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~-~-----~~v~~~D~~~~~~~~a~~~~~ 92 (161)
....++.+.++..+...+...+.......++.+|+|+|||+|.++..+++.. . .+++|+|+++.+++.|+.++.
T Consensus 101 ~~~~~g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~ 180 (344)
T 2f8l_A 101 HGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD 180 (344)
T ss_dssp SSCCGGGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH
T ss_pred cccccCcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH
Confidence 3455677888887776655544332233456799999999999999998752 1 589999999999999999998
Q ss_pred hcCCceEEEEcccccccCCCcccEEEECCCCCCCCCCc----------------chHHHHHHHhhcCCcEE
Q 031325 93 DLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKKGV----------------DMDFLSMALKVASQAVY 147 (161)
Q Consensus 93 ~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 147 (161)
..++++.+.++|.........||+|++||||+...... ...++..+.+.+++++.
T Consensus 181 ~~g~~~~i~~~D~l~~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~ 251 (344)
T 2f8l_A 181 LQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGY 251 (344)
T ss_dssp HHTCCCEEEESCTTSCCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEE
T ss_pred hCCCCceEEECCCCCccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCE
Confidence 88878899999998755444899999999987642211 12589999999974433
No 14
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.76 E-value=1.1e-17 Score=124.51 Aligned_cols=110 Identities=28% Similarity=0.326 Sum_probs=86.1
Q ss_pred ChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccc
Q 031325 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLEL--DIDFVQCDI 105 (161)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 105 (161)
.+.++..++... ..++.+|||+|||+|.+++.++..+. .+++|+|+|+.+++.|++++...++ ++++.++|+
T Consensus 203 ~~~la~~l~~~~-----~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~ 277 (373)
T 3tm4_A 203 KASIANAMIELA-----ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDA 277 (373)
T ss_dssp CHHHHHHHHHHH-----TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCG
T ss_pred cHHHHHHHHHhh-----cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 344444444433 34778999999999999999999753 3999999999999999999999998 799999999
Q ss_pred ccccCCC-cccEEEECCCCCCCCCC------cchHHHHHHHhhcC
Q 031325 106 RNLEWRG-HVDTVVMNPPFGTRKKG------VDMDFLSMALKVAS 143 (161)
Q Consensus 106 ~~~~~~~-~~D~i~~~~p~~~~~~~------~~~~~~~~~~~~~~ 143 (161)
.+++... +||+|++||||+..... .+.++++.+.+.++
T Consensus 278 ~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~ 322 (373)
T 3tm4_A 278 TQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLE 322 (373)
T ss_dssp GGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEE
T ss_pred hhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcC
Confidence 9987654 89999999999875321 23567788888775
No 15
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.76 E-value=1.7e-17 Score=115.59 Aligned_cols=104 Identities=17% Similarity=0.247 Sum_probs=82.1
Q ss_pred CCCCeEEEecCC-cchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC--CCcccEEEECCCC
Q 031325 47 VSNKVVADFGCG-CGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--RGHVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G-~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~i~~~~p~ 123 (161)
.++.+|||+||| +|.++..+++....+++|+|+++.+++.+++++...+++++++++|+..+.. ..+||+|++||||
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 477899999999 9999999998734599999999999999999999988889999999754322 2389999999999
Q ss_pred CCCCCCc-----------------chHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGV-----------------DMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+..... ...+++.+.+.+++++.++.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 7653211 25789999999985555444
No 16
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.76 E-value=8.7e-18 Score=119.61 Aligned_cols=103 Identities=18% Similarity=0.163 Sum_probs=89.1
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCC-cccEEEECCC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPP 122 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~-~~D~i~~~~p 122 (161)
..++.+|||+|||+|.++..+++.+..+++|+|+|+.+++.++++.+..++ +++++++|+.+++... +||+|+++.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 456789999999999999999998666999999999999999999998887 5999999999877544 8999999999
Q ss_pred CCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 123 FGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+++. ....+++.+.+.++++++++..
T Consensus 124 ~~~~---~~~~~l~~~~~~LkpgG~l~~~ 149 (267)
T 3kkz_A 124 IYNI---GFERGLNEWRKYLKKGGYLAVS 149 (267)
T ss_dssp GGGT---CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ceec---CHHHHHHHHHHHcCCCCEEEEE
Confidence 8876 3458999999999866665553
No 17
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.75 E-value=2.8e-17 Score=122.49 Aligned_cols=118 Identities=20% Similarity=0.280 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhhc--CCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc
Q 031325 32 IASRMLYTAENSF--GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (161)
Q Consensus 32 ~~~~~~~~~~~~~--~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 109 (161)
..+.+++.+.... ...++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++...+++++++.+|+.+..
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~ 293 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL 293 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc
Confidence 3344555554433 234678999999999999999999865 9999999999999999999998888999999999876
Q ss_pred CC-CcccEEEECCCCCCCC---CCcchHHHHHHHhhcCCcEEEEe
Q 031325 110 WR-GHVDTVVMNPPFGTRK---KGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 110 ~~-~~~D~i~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.. .+||+|++||||++.. ......+++.+.+.+++++.++.
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEE
Confidence 65 4899999999999742 34445789999999985444333
No 18
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.75 E-value=1.5e-17 Score=117.74 Aligned_cols=101 Identities=15% Similarity=0.076 Sum_probs=85.4
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhh------------------cCCceEEEEcccccc
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAAD------------------LELDIDFVQCDIRNL 108 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~------------------~~~~~~~~~~d~~~~ 108 (161)
.++.+|||+|||+|..+..|++.|. +|+|+|+|+.+++.|+++... .+.+++++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4678999999999999999999876 999999999999999876531 123799999999998
Q ss_pred cCC--CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEE
Q 031325 109 EWR--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 109 ~~~--~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (161)
+.. .+||+|++...+++........+++.+.+++++++.+
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEE
Confidence 765 4899999998888887666668999999999865554
No 19
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.75 E-value=8.2e-18 Score=120.85 Aligned_cols=99 Identities=22% Similarity=0.260 Sum_probs=89.4
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRK 127 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~ 127 (161)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...++++.+.++|+.+.+....||+|+++.++++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFLN 198 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGGGSC
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchhhCC
Confidence 678999999999999999999866 9999999999999999999988888999999999877655899999999999887
Q ss_pred CCcchHHHHHHHhhcCCcEE
Q 031325 128 KGVDMDFLSMALKVASQAVY 147 (161)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~ 147 (161)
......+++.+.+.++++++
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~ 218 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGY 218 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcE
Confidence 77777999999999985444
No 20
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.75 E-value=2.2e-17 Score=111.43 Aligned_cols=102 Identities=19% Similarity=0.229 Sum_probs=80.4
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC--CCcccEEEECCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW--RGHVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--~~~~D~i~~~~p~ 123 (161)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++..++ ++++++++...+.. ..+||+|+++++|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 46789999999999999999998 55999999999999999999998887 89999988877532 2389999999776
Q ss_pred CCC-------CCCcchHHHHHHHhhcCCcEEEE
Q 031325 124 GTR-------KKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 124 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
.+. ........++.+.+.+++++.++
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 132 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLA 132 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEE
Confidence 543 22344477899999998544443
No 21
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.75 E-value=2.6e-17 Score=118.35 Aligned_cols=121 Identities=19% Similarity=0.258 Sum_probs=90.5
Q ss_pred ChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccc
Q 031325 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIR 106 (161)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~ 106 (161)
+....+.+++.+.......++.+|||+|||+|.+++.+++.+..+++|+|+|+.+++.|++|+...++ ++.++++|+.
T Consensus 104 pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 104 PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTT
T ss_pred cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcch
Confidence 33344445554444332235679999999999999999987445999999999999999999999888 4999999998
Q ss_pred cccCCCcc---cEEEECCCCCCCCC-----------------CcchHHHHHHH-hhcCCcEEEEe
Q 031325 107 NLEWRGHV---DTVVMNPPFGTRKK-----------------GVDMDFLSMAL-KVASQAVYSLH 150 (161)
Q Consensus 107 ~~~~~~~~---D~i~~~~p~~~~~~-----------------~~~~~~~~~~~-~~~~~~~~~~~ 150 (161)
+... .+| |+|++||||..... .....+++.+. +.+++++.+++
T Consensus 184 ~~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 184 EPFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp GGGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred hhcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 8433 378 99999999975321 11237889999 88885544444
No 22
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.74 E-value=1e-17 Score=112.34 Aligned_cols=102 Identities=15% Similarity=0.259 Sum_probs=81.2
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccc-cCC-CcccEEEECC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL-EWR-GHVDTVVMNP 121 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~-~~~-~~~D~i~~~~ 121 (161)
..++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++++..++ ++.++.+|+.+. +.. ..||+|+++|
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 346789999999999999999988666999999999999999999998887 599999999884 222 3799999999
Q ss_pred CCCCCCCCcchHHHHHHH--hhcCCcEEEEe
Q 031325 122 PFGTRKKGVDMDFLSMAL--KVASQAVYSLH 150 (161)
Q Consensus 122 p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 150 (161)
||+. ....+.++.+. +.+++++.++.
T Consensus 109 ~~~~---~~~~~~~~~l~~~~~L~~gG~l~~ 136 (177)
T 2esr_A 109 PYAK---ETIVATIEALAAKNLLSEQVMVVC 136 (177)
T ss_dssp SSHH---HHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCc---chHHHHHHHHHhCCCcCCCcEEEE
Confidence 9853 22345666665 77775444444
No 23
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.74 E-value=3.8e-17 Score=115.47 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=88.2
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCC-cccEEEECCC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPP 122 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~-~~D~i~~~~p 122 (161)
..++.+|||+|||+|..+..+++.+..+++|+|+|+.+++.++++....++ ++.++++|+.+++... +||+|+++.+
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecCh
Confidence 446779999999999999999998545999999999999999999998887 4999999998877654 8999999999
Q ss_pred CCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 123 FGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+++. ....+++.+.+.++++++++..
T Consensus 124 l~~~---~~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 124 IYNI---GFERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp SCCC---CHHHHHHHHHTTEEEEEEEEEE
T ss_pred Hhhc---CHHHHHHHHHHHcCCCcEEEEE
Confidence 8876 3458999999999865555543
No 24
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.74 E-value=8e-17 Score=109.55 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=89.3
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCCcccEEEECCCC
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPF 123 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i~~~~p~ 123 (161)
...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....++ ++.+..+|+.+.+...+||+|+++.++
T Consensus 29 ~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l 107 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVL 107 (199)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCG
T ss_pred hccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchh
Confidence 334678999999999999999999855 999999999999999999988877 899999999987764489999999999
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEE
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (161)
++........+++.+.+.+++++.+
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l 132 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYN 132 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEE
Confidence 8877666779999999999855543
No 25
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.74 E-value=1.1e-16 Score=113.99 Aligned_cols=118 Identities=18% Similarity=0.160 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccc
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~ 108 (161)
+....+...+.......++.+|||+|||+|.++..+++....+++|+|+|+.+++.++++....++ ++.+..+|+.++
T Consensus 44 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 44 DATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 445566777777777778899999999999999999986445999999999999999999988776 699999999987
Q ss_pred cCCC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 109 EWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 109 ~~~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+... +||+|++..++++... ...+++++.+++++++.++.
T Consensus 124 ~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 124 PFEDASFDAVWALESLHHMPD--RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp CSCTTCEEEEEEESCTTTSSC--HHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCccEEEEechhhhCCC--HHHHHHHHHHHcCCCeEEEE
Confidence 7654 8999999999888643 35899999999986555554
No 26
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.73 E-value=4.5e-17 Score=112.55 Aligned_cols=117 Identities=18% Similarity=0.218 Sum_probs=92.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC------ceEEEEcccc
Q 031325 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIR 106 (161)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~------~~~~~~~d~~ 106 (161)
......+.......++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.+++++...++ ++.++++|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 3333444443333477899999999999999999874 36999999999999999999877665 5899999997
Q ss_pred cccCCC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 107 NLEWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 107 ~~~~~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
..+... +||+|+++..+++........+++.+.+.+++++.++.
T Consensus 95 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~ 139 (217)
T 3jwh_A 95 YQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVT 139 (217)
T ss_dssp SCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred cccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 665543 89999999999888655557999999999986555554
No 27
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.73 E-value=1.2e-16 Score=115.57 Aligned_cols=117 Identities=13% Similarity=0.081 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~ 107 (161)
+.....+..+.......++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.++++....++ ++.+..+|+.+
T Consensus 55 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (302)
T 3hem_A 55 EAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE 133 (302)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH
Confidence 344456666777767778889999999999999999987 6 5999999999999999999998887 69999999988
Q ss_pred ccCCCcccEEEECCCCCCC-------CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 108 LEWRGHVDTVVMNPPFGTR-------KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 108 ~~~~~~~D~i~~~~p~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+ ..+||+|+++..+++. .......+++++.+++++++.++.
T Consensus 134 ~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 134 F--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp C--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred c--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 7 3489999999998887 334456899999999986555544
No 28
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.73 E-value=8.3e-17 Score=113.68 Aligned_cols=113 Identities=13% Similarity=0.020 Sum_probs=91.9
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCc
Q 031325 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGH 113 (161)
Q Consensus 36 ~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~ 113 (161)
.+..+.......++.+|||+|||+|..+..+++....+++|+|+++.+++.++++....++ ++.++++|+.+++...+
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 103 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEK 103 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSC
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCC
Confidence 3344444445567889999999999999999986334999999999999999999988876 69999999998876448
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
||+|++...+++.. .....++++.+++++++.++.
T Consensus 104 fD~V~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 104 CDVAACVGATWIAG--GFAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEEEEEESCGGGTS--SSHHHHHHHTTSEEEEEEEEE
T ss_pred CCEEEECCChHhcC--CHHHHHHHHHHHcCCCeEEEE
Confidence 99999988877654 345899999999986655554
No 29
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.73 E-value=4.1e-17 Score=112.86 Aligned_cols=117 Identities=19% Similarity=0.171 Sum_probs=91.8
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC------ceEEEEcccc
Q 031325 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIR 106 (161)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~------~~~~~~~d~~ 106 (161)
......+.......++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.+++++...++ +++++.+|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 3333333333333467899999999999999999874 35999999999999999999876654 5899999997
Q ss_pred cccCCC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 107 NLEWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 107 ~~~~~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
..+... +||+|+++..+++........+++.+.+.+++++.++.
T Consensus 95 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~ 139 (219)
T 3jwg_A 95 YRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVS 139 (219)
T ss_dssp SCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred ccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEE
Confidence 765533 89999999999888655556899999999986555444
No 30
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.73 E-value=2.2e-18 Score=118.53 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=72.9
Q ss_pred hhHHHHHHHHHHhhcCC-CCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccc
Q 031325 30 PHIASRMLYTAENSFGD-VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (161)
Q Consensus 30 ~~~~~~~~~~~~~~~~~-~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~ 107 (161)
....+.++..+...... .++.+|||+|||+|.++..+++.. ..+++|+|+++.+++.+++++...+.++.++++|+.+
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~ 90 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE 90 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh
Confidence 34455666666665544 577899999999999999999873 4499999999999999999998877678899999987
Q ss_pred ccCC-----CcccEEEECCCCCCCCCCc------------------------chHHHHHHHhhcCCcEE
Q 031325 108 LEWR-----GHVDTVVMNPPFGTRKKGV------------------------DMDFLSMALKVASQAVY 147 (161)
Q Consensus 108 ~~~~-----~~~D~i~~~~p~~~~~~~~------------------------~~~~~~~~~~~~~~~~~ 147 (161)
.... .+||+|++||||....... ...+++.+.+.++++++
T Consensus 91 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 159 (215)
T 4dzr_A 91 WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRA 159 (215)
T ss_dssp HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSE
T ss_pred hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCe
Confidence 4433 5899999999997542110 05677888888885444
No 31
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.73 E-value=6.4e-17 Score=111.60 Aligned_cols=116 Identities=12% Similarity=0.105 Sum_probs=93.5
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (161)
...+...+.......++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+ ++.++++|+.+++...
T Consensus 36 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~ 113 (216)
T 3ofk_A 36 RERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFSTAE 113 (216)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCCCSC
T ss_pred HHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCCCCC
Confidence 334444444445556778999999999999999999864 99999999999999999987755 8999999999987555
Q ss_pred cccEEEECCCCCCCCC-CcchHHHHHHHhhcCCcEEEEe
Q 031325 113 HVDTVVMNPPFGTRKK-GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 113 ~~D~i~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+||+|+++.++++... .....+++.+.+.+++++.++.
T Consensus 114 ~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 114 LFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp CEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 9999999999888764 3334789999999986555554
No 32
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.73 E-value=6.9e-17 Score=120.24 Aligned_cols=107 Identities=16% Similarity=0.201 Sum_probs=84.1
Q ss_pred HhhcCCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC----ceEEEEcccccccCCCccc
Q 031325 41 ENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL----DIDFVQCDIRNLEWRGHVD 115 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~~~~~D 115 (161)
.......++.+|||+|||+|.+++.+++.+ ..+|+|+|+|+.+++.+++++..+++ ++.+..+|+.+.....+||
T Consensus 215 l~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD 294 (375)
T 4dcm_A 215 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 294 (375)
T ss_dssp HHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEE
T ss_pred HHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCee
Confidence 444455566899999999999999999874 56999999999999999999998875 4888999998854444899
Q ss_pred EEEECCCCCCC---CCCcchHHHHHHHhhcCCcEE
Q 031325 116 TVVMNPPFGTR---KKGVDMDFLSMALKVASQAVY 147 (161)
Q Consensus 116 ~i~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~ 147 (161)
+|++||||++. ......++++.+.+.+++++.
T Consensus 295 ~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~ 329 (375)
T 4dcm_A 295 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 329 (375)
T ss_dssp EEEECCCC-------CCHHHHHHHHHHHHEEEEEE
T ss_pred EEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcE
Confidence 99999999864 233334689999999984333
No 33
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.73 E-value=3.5e-17 Score=124.44 Aligned_cols=125 Identities=25% Similarity=0.253 Sum_probs=99.4
Q ss_pred cccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc--------------CCCeEEEEeCChHHHH
Q 031325 20 KVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--------------GADQVIAIDIDSDSLE 85 (161)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~--------------~~~~v~~~D~~~~~~~ 85 (161)
+...+.|.+|..++..+++.+. +.++.+|+|+|||+|.+++.+++. ...+++|+|+++.+++
T Consensus 147 ~~~~G~fyTP~~v~~~mv~~l~----~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~ 222 (445)
T 2okc_A 147 KSGAGQYFTPRPLIQAMVDCIN----PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVT 222 (445)
T ss_dssp TTCCGGGCCCHHHHHHHHHHHC----CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHH
T ss_pred cccCCcccCcHHHHHHHHHHhC----CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHH
Confidence 3456788899998888777653 346779999999999999998864 2248999999999999
Q ss_pred HHHHHHhhcCC---ceEEEEcccccccCCCcccEEEECCCCCCCCCCc---------------chHHHHHHHhhcCCcEE
Q 031325 86 LASENAADLEL---DIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKKGV---------------DMDFLSMALKVASQAVY 147 (161)
Q Consensus 86 ~a~~~~~~~~~---~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 147 (161)
.|+.++..+++ ++.+.++|....+....||+|++||||+...... ...++..+.+.+++++.
T Consensus 223 lA~~nl~l~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~ 302 (445)
T 2okc_A 223 LASMNLYLHGIGTDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGR 302 (445)
T ss_dssp HHHHHHHHTTCCSSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHhCCCcCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCE
Confidence 99999988887 6789999998876655899999999998753221 13789999999985433
Q ss_pred E
Q 031325 148 S 148 (161)
Q Consensus 148 ~ 148 (161)
+
T Consensus 303 ~ 303 (445)
T 2okc_A 303 A 303 (445)
T ss_dssp E
T ss_pred E
Confidence 3
No 34
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.73 E-value=1.3e-16 Score=107.85 Aligned_cols=108 Identities=20% Similarity=0.263 Sum_probs=88.0
Q ss_pred HhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-c--eEEEEcccccccCCCcccEE
Q 031325 41 ENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-D--IDFVQCDIRNLEWRGHVDTV 117 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~--~~~~~~d~~~~~~~~~~D~i 117 (161)
.......++.+|||+|||+|.++..+++. ..+++|+|+++.+++.++++....++ + +.+..+|+.+......||+|
T Consensus 45 ~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v 123 (194)
T 1dus_A 45 VENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKI 123 (194)
T ss_dssp HHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEE
T ss_pred HHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEE
Confidence 33334457789999999999999999988 55999999999999999999988887 4 99999999885544489999
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++++||++. ......+++.+.+.+++++.++.
T Consensus 124 ~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~ 155 (194)
T 1dus_A 124 ITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWV 155 (194)
T ss_dssp EECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECCCcccc-hhHHHHHHHHHHHHcCCCCEEEE
Confidence 999998862 23445889999999985554444
No 35
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.73 E-value=1e-16 Score=106.59 Aligned_cols=118 Identities=14% Similarity=0.174 Sum_probs=87.7
Q ss_pred CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccc
Q 031325 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (161)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~ 105 (161)
.++...+...+...+.... .++.+|||+|||+|.++..+++.+. .++|+|+|+.+++.+++++...+++++++++|+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~--~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~ 97 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLRLRY--PRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV 97 (171)
T ss_dssp CCCCHHHHHHHHHHHHHHC--TTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH
T ss_pred CCCHHHHHHHHHHHHHhhc--cCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccH
Confidence 3344555555555544321 1567999999999999999999866 599999999999999999988877889999999
Q ss_pred ccccC-----CCcccEEEECCCCCCCCCCcchHHHHHHH--hhcCCcEEEEe
Q 031325 106 RNLEW-----RGHVDTVVMNPPFGTRKKGVDMDFLSMAL--KVASQAVYSLH 150 (161)
Q Consensus 106 ~~~~~-----~~~~D~i~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 150 (161)
.+... ..+||+|+++|||+ . ...+.++.+. +.+++++.++.
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~-~---~~~~~~~~~~~~~~L~~gG~~~~ 145 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYA-M---DLAALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTT-S---CTTHHHHHHHHHTCEEEEEEEEE
T ss_pred HHHHHhhhccCCceEEEEECCCCc-h---hHHHHHHHHHhhcccCCCcEEEE
Confidence 87422 12699999999997 2 2235666666 77875444443
No 36
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=7.1e-17 Score=114.74 Aligned_cols=105 Identities=21% Similarity=0.304 Sum_probs=82.5
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhh---cCC--ceEEEEccccccc-------C-
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAAD---LEL--DIDFVQCDIRNLE-------W- 110 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~---~~~--~~~~~~~d~~~~~-------~- 110 (161)
...++.+|||+|||+|.+++.++++. ..+++|+|+++.+++.|++++.. .++ ++.++++|+.+.. .
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 44467799999999999999999874 45999999999999999999988 777 5999999998872 1
Q ss_pred CCcccEEEECCCCCCCC----------------CCcchHHHHHHHhhcCCcEEEE
Q 031325 111 RGHVDTVVMNPPFGTRK----------------KGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 111 ~~~~D~i~~~~p~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
..+||+|++||||.... ......+++.+.+.+++++.++
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~ 167 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLS 167 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEE
Confidence 23899999999997642 1224578999999998544433
No 37
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.72 E-value=1.1e-16 Score=113.50 Aligned_cols=107 Identities=20% Similarity=0.193 Sum_probs=89.0
Q ss_pred HhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCC-cccEEE
Q 031325 41 ENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVV 118 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~-~~D~i~ 118 (161)
.......++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....++ ++.++.+|+.+++... +||+|+
T Consensus 30 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~ 108 (260)
T 1vl5_A 30 MQIAALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVT 108 (260)
T ss_dssp HHHHTCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEE
T ss_pred HHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEE
Confidence 3333455788999999999999999998864 999999999999999999988876 7999999999987654 899999
Q ss_pred ECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 119 MNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 119 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++..+++.. .....+.++.+++++++.++.
T Consensus 109 ~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 109 CRIAAHHFP--NPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EESCGGGCS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred EhhhhHhcC--CHHHHHHHHHHHcCCCCEEEE
Confidence 998888764 345899999999986555544
No 38
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.72 E-value=2e-16 Score=113.64 Aligned_cols=117 Identities=16% Similarity=0.174 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHH-cCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~ 107 (161)
+........+.......++.+|||+|||+|.++..+++ .+. +++|+|+|+.+++.+++++...++ ++.+..+|+.+
T Consensus 47 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 125 (287)
T 1kpg_A 47 EAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ 125 (287)
T ss_dssp HHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh
Confidence 34445666667666667888999999999999999995 455 999999999999999999988776 78999999987
Q ss_pred ccCCCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 108 LEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 108 ~~~~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++ .+||+|++...+++........+++++.+++++++.++.
T Consensus 126 ~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 126 FD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp CC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred CC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 76 589999999999887666667999999999986555444
No 39
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.72 E-value=3.8e-17 Score=117.16 Aligned_cols=97 Identities=23% Similarity=0.311 Sum_probs=84.0
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~~~ 125 (161)
++.+|||+|||+|.+++.+++.+..+|+|+|+|+.+++.|+++++.+++ +++++++|+.++.....||+|+++||+..
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~~~ 204 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVRT 204 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSSG
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCchhH
Confidence 5789999999999999999998665799999999999999999998888 48999999999877558999999999543
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+++..+.+.+++++.++.
T Consensus 205 ------~~~l~~~~~~LkpgG~l~~ 223 (278)
T 2frn_A 205 ------HEFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp ------GGGHHHHHHHEEEEEEEEE
T ss_pred ------HHHHHHHHHHCCCCeEEEE
Confidence 4788899999986555554
No 40
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.72 E-value=1.2e-16 Score=110.06 Aligned_cols=115 Identities=21% Similarity=0.188 Sum_probs=93.2
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW 110 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 110 (161)
...+...+.......++ +|||+|||+|.++..+++.+..+++|+|+++.+++.+++++...++ ++.++++|+.+++.
T Consensus 29 ~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (219)
T 3dlc_A 29 YPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI 107 (219)
T ss_dssp HHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS
T ss_pred cHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC
Confidence 33444555555454445 9999999999999999987445999999999999999999998876 69999999999776
Q ss_pred CC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 111 RG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 111 ~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.. +||+|+++.++++. .....+++.+.+.+++++.++.
T Consensus 108 ~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 108 EDNYADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp CTTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEE
T ss_pred CcccccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEE
Confidence 54 89999999998876 4445899999999986555544
No 41
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.72 E-value=4.2e-16 Score=106.73 Aligned_cols=106 Identities=12% Similarity=0.116 Sum_probs=87.2
Q ss_pred HhhcCCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC-CcccEE
Q 031325 41 ENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR-GHVDTV 117 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-~~~D~i 117 (161)
.......++.+|||+|||+|.++..+++.+ ..+++++|+++.+++.+++++...++ +++++.+|+.+.... ..||+|
T Consensus 33 l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i 112 (204)
T 3e05_A 33 LSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRV 112 (204)
T ss_dssp HHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEE
T ss_pred HHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEE
Confidence 333455578899999999999999999874 46999999999999999999998887 799999999765443 489999
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+++.+++ ....+++.+.+.+++++.++..
T Consensus 113 ~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 113 FIGGSGG-----MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp EESCCTT-----CHHHHHHHHHHHCCTTCEEEEE
T ss_pred EECCCCc-----CHHHHHHHHHHhcCCCeEEEEE
Confidence 9998864 4458999999999865555543
No 42
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.72 E-value=4.9e-17 Score=121.17 Aligned_cols=111 Identities=20% Similarity=0.268 Sum_probs=84.6
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC---------------------------------------Ce
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA---------------------------------------DQ 73 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~---------------------------------------~~ 73 (161)
.+.+...++......++..++|++||+|.++++++..+. .+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 334444444444445778999999999999999987532 25
Q ss_pred EEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCCCCCCCC--cchHHHHHHHhhcC
Q 031325 74 VIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKKG--VDMDFLSMALKVAS 143 (161)
Q Consensus 74 v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~~~--~~~~~~~~~~~~~~ 143 (161)
++|+|+|+.+++.|++|++..|+ .+.+.++|+.+++....||+|++||||+..-.. .....+..+.+.++
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFA 332 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998 599999999998765689999999999876322 22244444444544
No 43
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.72 E-value=5.1e-17 Score=121.28 Aligned_cols=111 Identities=22% Similarity=0.284 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC---------------------------------------Ce
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA---------------------------------------DQ 73 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~---------------------------------------~~ 73 (161)
.+.+...++...+..++.+++|++||+|.++++++..+. .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 344555555555556778999999999999999987531 37
Q ss_pred EEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCCCCCCC--CcchHHHHHHHhhcC
Q 031325 74 VIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKK--GVDMDFLSMALKVAS 143 (161)
Q Consensus 74 v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~~--~~~~~~~~~~~~~~~ 143 (161)
|+|+|+|+.+++.|++|+..+++ ++++.++|+.++.....||+|++||||+.... ......+..+.+.++
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFR 333 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998 69999999999876668999999999986522 222244444444443
No 44
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.72 E-value=2.2e-17 Score=115.85 Aligned_cols=92 Identities=34% Similarity=0.429 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccc
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~ 108 (161)
.+...+...+... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...++ ++.++++|+.++
T Consensus 64 ~~~~~l~~~~~~~---~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 139 (241)
T 3gdh_A 64 KIAEHIAGRVSQS---FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL 139 (241)
T ss_dssp HHHHHHHHHHHHH---SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHhhhc---cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh
Confidence 3445555444433 267899999999999999999986 5999999999999999999999887 799999999988
Q ss_pred cCCCcccEEEECCCCCCC
Q 031325 109 EWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 109 ~~~~~~D~i~~~~p~~~~ 126 (161)
+...+||+|+++|||++.
T Consensus 140 ~~~~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 140 ASFLKADVVFLSPPWGGP 157 (241)
T ss_dssp GGGCCCSEEEECCCCSSG
T ss_pred cccCCCCEEEECCCcCCc
Confidence 755599999999999875
No 45
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.71 E-value=1.7e-16 Score=120.22 Aligned_cols=121 Identities=17% Similarity=0.238 Sum_probs=96.3
Q ss_pred CChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccc
Q 031325 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIR 106 (161)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~ 106 (161)
.+....+.+...+.......++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++.+++ ++.++++|+.
T Consensus 266 ~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~ 344 (433)
T 1uwv_A 266 VNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLE 344 (433)
T ss_dssp SBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTT
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHH
Confidence 345667777777777666667789999999999999999987 45999999999999999999998888 8999999998
Q ss_pred cccC----C-CcccEEEECCCCCCCCCCcchHHHHHHHhhcC-CcEEEEeccCc
Q 031325 107 NLEW----R-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSLHKTST 154 (161)
Q Consensus 107 ~~~~----~-~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 154 (161)
+... . .+||+|++|||+... . +.++.+....+ +++|+.|+..+
T Consensus 345 ~~l~~~~~~~~~fD~Vv~dPPr~g~----~-~~~~~l~~~~p~~ivyvsc~p~t 393 (433)
T 1uwv_A 345 EDVTKQPWAKNGFDKVLLDPARAGA----A-GVMQQIIKLEPIRIVYVSCNPAT 393 (433)
T ss_dssp SCCSSSGGGTTCCSEEEECCCTTCC----H-HHHHHHHHHCCSEEEEEESCHHH
T ss_pred HHhhhhhhhcCCCCEEEECCCCccH----H-HHHHHHHhcCCCeEEEEECChHH
Confidence 8422 2 279999999997532 2 45566555444 58888887554
No 46
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.71 E-value=7e-17 Score=120.78 Aligned_cols=95 Identities=31% Similarity=0.424 Sum_probs=78.7
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC---------------------------------------C
Q 031325 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA---------------------------------------D 72 (161)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~---------------------------------------~ 72 (161)
+.+.+...++......++..++|++||+|.++++++..+. .
T Consensus 185 l~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 185 IKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp CCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 3444555555555555778999999999999999987532 3
Q ss_pred eEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 73 QVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 73 ~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
+++|+|+|+.+++.|++|+..+|+ ++++.++|+.+++...+||+|++||||+..
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~r 320 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGER 320 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCS
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccc
Confidence 599999999999999999999998 599999999998765689999999999875
No 47
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.71 E-value=1.7e-16 Score=110.76 Aligned_cols=112 Identities=14% Similarity=0.194 Sum_probs=92.0
Q ss_pred HHHHhhcC-CCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCccc
Q 031325 38 YTAENSFG-DVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVD 115 (161)
Q Consensus 38 ~~~~~~~~-~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D 115 (161)
..+..... ..++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.++++....+ ++.++++|+.+++...+||
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~fD 111 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYDFEEKYD 111 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCCCCSCEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccCCCCCce
Confidence 33333333 4567899999999999999999872 4599999999999999999987766 8999999999987667899
Q ss_pred EEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 116 TVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 116 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|+++.++++........+++++.+.+++++.++.
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99999999888655555799999999986665554
No 48
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=3e-16 Score=110.57 Aligned_cols=114 Identities=18% Similarity=0.235 Sum_probs=89.9
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCccc
Q 031325 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVD 115 (161)
Q Consensus 36 ~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D 115 (161)
.+..+.......++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+.++.++++|+.+++...+||
T Consensus 29 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD 107 (252)
T 1wzn_A 29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFD 107 (252)
T ss_dssp HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEE
T ss_pred HHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCcc
Confidence 344444444445678999999999999999999865 9999999999999999999887778999999999876655899
Q ss_pred EEEECCC-CCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 116 TVVMNPP-FGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 116 ~i~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|++... +++........+++.+.+.+++++.++.
T Consensus 108 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 108 AVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp EEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 9998532 3333444556889999999986555544
No 49
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.71 E-value=4.3e-16 Score=113.46 Aligned_cols=116 Identities=14% Similarity=0.137 Sum_probs=97.3
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccc
Q 031325 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (161)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~ 108 (161)
........+.......++.+|||+|||+|.++..+++. +. +++|+|+|+.+++.++++....++ ++.+..+|+.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 74 AQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF 152 (318)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC
T ss_pred HHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC
Confidence 34456666676666678889999999999999999987 65 999999999999999999988876 589999999887
Q ss_pred cCCCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 109 EWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 109 ~~~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+ .+||+|++..++++........+++++.+++++++.++.
T Consensus 153 ~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 153 A--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp C--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred C--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5 479999999999887666667999999999986555444
No 50
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.71 E-value=3.9e-16 Score=113.52 Aligned_cols=111 Identities=14% Similarity=0.182 Sum_probs=92.8
Q ss_pred HHHHHHhhcC-CCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC
Q 031325 36 MLYTAENSFG-DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (161)
Q Consensus 36 ~~~~~~~~~~-~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~ 111 (161)
....+...+. ..++.+|||+|||+|.++..+++. +. +|+|+|+++.+++.+++++...++ ++.++.+|+.+++..
T Consensus 104 ~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 104 QAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC
Confidence 3344555555 567789999999999999999987 54 999999999999999999998887 699999999988755
Q ss_pred C-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 112 G-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 112 ~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. .||+|+++..+++.. ...+++.+.+.+++++.++.
T Consensus 183 ~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 183 KGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp TTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEE
Confidence 4 999999998888773 66999999999986555554
No 51
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.71 E-value=1.7e-16 Score=113.38 Aligned_cols=96 Identities=23% Similarity=0.322 Sum_probs=84.0
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~~~ 125 (161)
++.+|||+|||+|.+++.+|+.+..+|+++|+||.+++.+++|++.+++ +++++++|+.++.....||.|++|+|+..
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~~ 204 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVRT 204 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSSG
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCCcH
Confidence 6899999999999999999998877999999999999999999999998 69999999999876669999999998532
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEE
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
.+++..+.+.+++++.+.
T Consensus 205 ------~~~l~~a~~~lk~gG~ih 222 (278)
T 3k6r_A 205 ------HEFIPKALSIAKDGAIIH 222 (278)
T ss_dssp ------GGGHHHHHHHEEEEEEEE
T ss_pred ------HHHHHHHHHHcCCCCEEE
Confidence 378888889998555443
No 52
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.71 E-value=4.5e-16 Score=106.82 Aligned_cols=101 Identities=14% Similarity=0.134 Sum_probs=82.8
Q ss_pred hcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC-CcccEEEE
Q 031325 43 SFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHVDTVVM 119 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~~D~i~~ 119 (161)
.....++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|+++++..++ ++.++.+|+.+.... ..||+|++
T Consensus 50 ~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~ 128 (204)
T 3njr_A 50 ALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFI 128 (204)
T ss_dssp HHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEE
T ss_pred hcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEE
Confidence 334557889999999999999999998 55999999999999999999998887 599999999884333 38999999
Q ss_pred CCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 120 NPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 120 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
++.. .. ++++.+.+.+++++.++..
T Consensus 129 ~~~~------~~-~~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 129 GGGG------SQ-ALYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp CSCC------CH-HHHHHHHHHSCTTCEEEEE
T ss_pred CCcc------cH-HHHHHHHHhcCCCcEEEEE
Confidence 7743 22 3899999999865555554
No 53
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.71 E-value=1.1e-16 Score=109.09 Aligned_cols=103 Identities=19% Similarity=0.270 Sum_probs=83.3
Q ss_pred CCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC-C-CcccEEEEC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW-R-GHVDTVVMN 120 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~-~~~D~i~~~ 120 (161)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.+++++...++ +++++++|+.+++. . .+||+|+++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 36789999999999999999986 345999999999999999999998877 79999999988752 2 389999999
Q ss_pred CCCCCC-------CCCcchHHHHHHHhhcCCcEEEE
Q 031325 121 PPFGTR-------KKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 121 ~p~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
+||... ......++++.+.+.+++++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~ 136 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIIT 136 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEE
Confidence 988321 11133478999999998544444
No 54
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.71 E-value=1.3e-16 Score=111.53 Aligned_cols=102 Identities=16% Similarity=0.085 Sum_probs=87.6
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~~~ 125 (161)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+. ++.++++|+.+++....||+|+++.++++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 345999999999999999988654 999999999999999999877543 79999999999776559999999999998
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
........+++.+.+.++++++++.
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEE
Confidence 8766777999999999986555554
No 55
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=3.7e-16 Score=108.37 Aligned_cols=115 Identities=18% Similarity=0.210 Sum_probs=90.2
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (161)
...+...+..... ++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+.++.++++|+.+++...
T Consensus 25 ~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 25 IETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFED 101 (227)
T ss_dssp HHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCT
T ss_pred HHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCC
Confidence 3444444444333 378999999999999999998865 9999999999999999998876667999999998876544
Q ss_pred -cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 113 -HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 113 -~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+||+|+++++++.........+++.+.+.+++++.++.
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 89999999994444444456889999999986554443
No 56
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.70 E-value=2e-16 Score=109.29 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=84.4
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRK 127 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~ 127 (161)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.. .++.++.+|+.+++...+||+|+++.++++..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCCSCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCCCCeEEEEECcchhcCC
Confidence 678999999999999999999854 99999999999999998876 25889999999876556899999999998876
Q ss_pred CCcchHHHHHHHhhcCCcEEEEe
Q 031325 128 KGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
......+++++.+.+++++.++.
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEE
T ss_pred hHHHHHHHHHHHHhcCCCCEEEE
Confidence 66545699999999986555544
No 57
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.70 E-value=2.3e-16 Score=108.93 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=84.2
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccccccc--CCC-cccEEEECCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE--WRG-HVDTVVMNPP 122 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~-~~D~i~~~~p 122 (161)
++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++...++ ++.++++|+.+++ ... +||+|++++|
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 5779999999999999999986 345999999999999999999998887 8999999998865 323 8999999988
Q ss_pred CCCCC------CCcchHHHHHHHhhcCCcEEEEec
Q 031325 123 FGTRK------KGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 123 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
-.+.. ......+++.+.+.+++++.++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 54322 113457999999999855555443
No 58
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.70 E-value=2.2e-16 Score=105.46 Aligned_cols=105 Identities=18% Similarity=0.271 Sum_probs=79.3
Q ss_pred CChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccc
Q 031325 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (161)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~ 107 (161)
.+......+++.+... ..++.+|||+|||+|.++..+++.+ +++|+|+|+.+++. .-+++++++|+.+
T Consensus 5 ~P~~~~~~l~~~l~~~--~~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~--------~~~~~~~~~d~~~ 72 (170)
T 3q87_B 5 EPGEDTYTLMDALERE--GLEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES--------HRGGNLVRADLLC 72 (170)
T ss_dssp CCCHHHHHHHHHHHHH--TCCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT--------CSSSCEEECSTTT
T ss_pred CcCccHHHHHHHHHhh--cCCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc--------ccCCeEEECChhh
Confidence 3444555566654331 1356799999999999999999976 99999999999987 1268899999988
Q ss_pred ccCCCcccEEEECCCCCCCCCC-------cchHHHHHHHhhcCC
Q 031325 108 LEWRGHVDTVVMNPPFGTRKKG-------VDMDFLSMALKVASQ 144 (161)
Q Consensus 108 ~~~~~~~D~i~~~~p~~~~~~~-------~~~~~~~~~~~~~~~ 144 (161)
.....+||+|++||||++.... .....+..+.+.+++
T Consensus 73 ~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpg 116 (170)
T 3q87_B 73 SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAVTV 116 (170)
T ss_dssp TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHCCS
T ss_pred hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhCCC
Confidence 4333489999999999875433 345778888887753
No 59
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.70 E-value=5.3e-17 Score=115.13 Aligned_cols=94 Identities=15% Similarity=0.143 Sum_probs=78.7
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~~ 126 (161)
...+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++ .++.++++|+.+++... +||+|++...+|+.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~-----~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~ 112 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH-----PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF 112 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC-----TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc-----CCceeehhhhhhhcccCCcccEEEEeeehhHh
Confidence 356899999999999999999864 999999999999877532 26999999999988765 99999999999886
Q ss_pred CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 127 KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+ ..+++.++.++|++++.++.
T Consensus 113 ~---~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 113 D---LDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp C---HHHHHHHHHHHEEEEEEEEE
T ss_pred h---HHHHHHHHHHHcCCCCEEEE
Confidence 4 34899999999996555443
No 60
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.70 E-value=5.2e-16 Score=114.56 Aligned_cols=114 Identities=18% Similarity=0.195 Sum_probs=92.7
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCc
Q 031325 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGH 113 (161)
Q Consensus 36 ~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~ 113 (161)
....+.......++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.++++++..++ +++++.+|+.+++...+
T Consensus 38 y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 38 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 3344444444557889999999999999999998777999999996 88999999988876 69999999998765558
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
||+|++++++.+.........+..+.+.|++++.++.
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999999997776555556788888899986666654
No 61
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.70 E-value=2.3e-16 Score=108.94 Aligned_cols=108 Identities=22% Similarity=0.299 Sum_probs=89.7
Q ss_pred HhhcCCCCCCeEEEecCCcchHHHHHHHcC--CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCC-cccE
Q 031325 41 ENSFGDVSNKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDT 116 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G~~~~~la~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~-~~D~ 116 (161)
.......++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.+++++...++ ++.+..+|+.+++... +||+
T Consensus 30 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 109 (219)
T 3dh0_A 30 LKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDF 109 (219)
T ss_dssp HHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEE
T ss_pred HHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeE
Confidence 333345578899999999999999999873 35999999999999999999988887 7999999999876554 8999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+++..+++.. ....+++.+.+.+++++.++.
T Consensus 110 v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 110 IFMAFTFHELS--EPLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEE
Confidence 99999988763 345899999999986555544
No 62
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.70 E-value=3.6e-16 Score=116.41 Aligned_cols=120 Identities=23% Similarity=0.351 Sum_probs=92.7
Q ss_pred CcccccC-CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCC
Q 031325 19 PKVELEQ-YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLEL 96 (161)
Q Consensus 19 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~ 96 (161)
....+++ +.++......++.. ......++.+|||+| |+|.++..+++.+. .+|+++|+++.+++.|+++++..++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~ 220 (373)
T 2qm3_A 144 PLHEFDQAYVTPETTVARVILM--HTRGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY 220 (373)
T ss_dssp CCGGGTCCCBCHHHHHHHHHHH--HHTTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC
T ss_pred cchhcCCeecCHHHHHHHHHHH--hhcCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3334544 44544555444433 122334678999999 99999999998754 6999999999999999999998888
Q ss_pred -ceEEEEccccc-ccC--CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCC
Q 031325 97 -DIDFVQCDIRN-LEW--RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ 144 (161)
Q Consensus 97 -~~~~~~~d~~~-~~~--~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~ 144 (161)
+++++++|+.+ ++. ..+||+|++||||+... ...+++.+.+.+++
T Consensus 221 ~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~---~~~~l~~~~~~Lkp 269 (373)
T 2qm3_A 221 EDIEIFTFDLRKPLPDYALHKFDTFITDPPETLEA---IRAFVGRGIATLKG 269 (373)
T ss_dssp CCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHHH---HHHHHHHHHHTBCS
T ss_pred CCEEEEEChhhhhchhhccCCccEEEECCCCchHH---HHHHHHHHHHHccc
Confidence 89999999988 543 23899999999998642 46899999999984
No 63
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.70 E-value=5.6e-16 Score=115.47 Aligned_cols=118 Identities=14% Similarity=0.110 Sum_probs=94.6
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW 110 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 110 (161)
.......+.......++.+|||+|||+|.++..+++.+..+|+|+|++ .+++.++++++..++ +++++++|+.++..
T Consensus 48 ~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 126 (376)
T 3r0q_C 48 MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL 126 (376)
T ss_dssp HHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC
T ss_pred HHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc
Confidence 334445555544556789999999999999999999877799999999 999999999999887 49999999998876
Q ss_pred CCcccEEEECCCCCCC-CCCcchHHHHHHHhhcCCcEEEEec
Q 031325 111 RGHVDTVVMNPPFGTR-KKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 111 ~~~~D~i~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
..+||+|++++..+.. .......++..+.+.|++++.++..
T Consensus 127 ~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 127 PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 5689999998854433 3344556888888999877766653
No 64
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.70 E-value=5.9e-16 Score=111.65 Aligned_cols=116 Identities=11% Similarity=0.039 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhhc----CCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcc
Q 031325 32 IASRMLYTAENSF----GDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCD 104 (161)
Q Consensus 32 ~~~~~~~~~~~~~----~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d 104 (161)
........+.... ...++.+|||+|||+|..+..+++. +. +++|+|+++.+++.++++....++ ++.++.+|
T Consensus 62 ~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d 140 (297)
T 2o57_A 62 ASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS 140 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC
T ss_pred HHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcC
Confidence 3444555555555 5567889999999999999999986 55 999999999999999999988776 69999999
Q ss_pred cccccCCC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 105 IRNLEWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 105 ~~~~~~~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+.+++... +||+|++...+++... ...+++++.+++++++.++.
T Consensus 141 ~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 141 FLEIPCEDNSYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp TTSCSSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCCCCCCEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEE
Confidence 99987654 8999999988877644 56999999999986555554
No 65
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.69 E-value=5.1e-16 Score=117.18 Aligned_cols=120 Identities=22% Similarity=0.296 Sum_probs=93.3
Q ss_pred CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccc
Q 031325 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (161)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~ 105 (161)
+..+....+.+...+.. ..++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++++.++++++++.+|+
T Consensus 271 ~q~n~~~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~ 346 (425)
T 2jjq_A 271 FQTNSYQAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASD 346 (425)
T ss_dssp CCSBHHHHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred cccCHHHHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECCh
Confidence 33455666666666655 2467899999999999999999874 4999999999999999999998887789999999
Q ss_pred ccccCCCcccEEEECCCCCCCCCCcchHHHHHHHhhcC-CcEEEEeccCc
Q 031325 106 RNLEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSLHKTST 154 (161)
Q Consensus 106 ~~~~~~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 154 (161)
.++... .||+|++|||+. +....+++.+..+.+ +.+|+.|+..+
T Consensus 347 ~~~~~~-~fD~Vv~dPPr~----g~~~~~~~~l~~l~p~givyvsc~p~t 391 (425)
T 2jjq_A 347 REVSVK-GFDTVIVDPPRA----GLHPRLVKRLNREKPGVIVYVSCNPET 391 (425)
T ss_dssp TTCCCT-TCSEEEECCCTT----CSCHHHHHHHHHHCCSEEEEEESCHHH
T ss_pred HHcCcc-CCCEEEEcCCcc----chHHHHHHHHHhcCCCcEEEEECChHH
Confidence 987544 799999999953 344456666655443 57788876544
No 66
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.69 E-value=1.9e-16 Score=112.23 Aligned_cols=115 Identities=17% Similarity=0.069 Sum_probs=94.7
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-c
Q 031325 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-H 113 (161)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~ 113 (161)
.....+.......++.+|||+|||+|.++..+++....+++|+|+|+.+++.++++.... .++.++++|+.+++... +
T Consensus 42 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~ 120 (266)
T 3ujc_A 42 EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENN 120 (266)
T ss_dssp HHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTC
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCc
Confidence 444556666666778899999999999999999862349999999999999999887654 37999999999876644 9
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
||+|+++..+++........+++++.+.+++++.++.
T Consensus 121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEE
Confidence 9999999999888666777999999999986555554
No 67
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.69 E-value=5.3e-16 Score=108.75 Aligned_cols=104 Identities=18% Similarity=0.153 Sum_probs=88.2
Q ss_pred cCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCC-cccEEEECC
Q 031325 44 FGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVVMNP 121 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~-~~D~i~~~~ 121 (161)
....++.+|||+|||+|.++..+++.+. +++|+|+++.+++.+++++...++ ++.++.+|+.+++... +||+|+++.
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRY 95 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEES
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECC
Confidence 3455788999999999999999998864 999999999999999999988877 7999999998877654 899999998
Q ss_pred CCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 122 PFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 122 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+++.. .....+.++.+++++++.++.
T Consensus 96 ~l~~~~--~~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 96 AAHHFS--DVRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp CGGGCS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhcc--CHHHHHHHHHHHcCCCcEEEE
Confidence 887764 345899999999986555544
No 68
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.69 E-value=8.4e-16 Score=113.10 Aligned_cols=111 Identities=21% Similarity=0.179 Sum_probs=89.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC-Ccc
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHV 114 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~~ 114 (161)
..+.......++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|+++++..++ +++++.+|+.+++.. .+|
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 44444444567889999999999999999998766999999997 99999999988876 799999999987665 389
Q ss_pred cEEEECC-CCCCCCCCcchHHHHHHHhhcCCcEEEE
Q 031325 115 DTVVMNP-PFGTRKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 115 D~i~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
|+|++++ +|..........++..+.+.+++++.++
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 9999988 4444444555578888999998666655
No 69
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.69 E-value=7.4e-16 Score=103.05 Aligned_cols=107 Identities=15% Similarity=0.118 Sum_probs=84.0
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC--C
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR--G 112 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~--~ 112 (161)
..+.......++.+|||+|||+|.++..+++. +..+++++|+++.+++.+++++...++ ++ ++.+|..+.... .
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCS
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCC
Confidence 33344445557789999999999999999886 356999999999999999999998877 57 888888653332 4
Q ss_pred cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 113 HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 113 ~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+||+|+++.++++ ..+++.+.+.+++++.++..
T Consensus 94 ~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 94 NPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp CCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEE
T ss_pred CCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEE
Confidence 8999999988765 48899999999865555543
No 70
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.69 E-value=2.7e-16 Score=109.05 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=84.2
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccc-c---CCCcccEEEEC-
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL-E---WRGHVDTVVMN- 120 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~-~---~~~~~D~i~~~- 120 (161)
++.+|||+|||+|.++..+++. +...++|+|+++.+++.|++++...++ ++.++++|+.++ + ...+||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 5679999999999999999986 345899999999999999999998888 899999999884 2 23389999998
Q ss_pred -CCCCCCC----CCcchHHHHHHHhhcCCcEEEEeccCc
Q 031325 121 -PPFGTRK----KGVDMDFLSMALKVASQAVYSLHKTST 154 (161)
Q Consensus 121 -~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (161)
.||.... ......+++.+.+.|++++++...+..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 4543321 122236999999999966666654433
No 71
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.69 E-value=3.4e-16 Score=110.36 Aligned_cols=112 Identities=13% Similarity=0.043 Sum_probs=91.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccE
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDT 116 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~ 116 (161)
..+.......++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++.... .++.++++|+.+++... +||+
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~ 161 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTYDL 161 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCeEE
Confidence 444445555577899999999999999998876668999999999999999987654 36899999998876544 8999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|++...+++........+++++.+.++++++++.
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 9999998887655567899999999986555554
No 72
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.69 E-value=9.1e-16 Score=108.24 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=89.4
Q ss_pred HHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEE
Q 031325 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTV 117 (161)
Q Consensus 39 ~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i 117 (161)
.+.......++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++.. ..++.+.++|+.+++... +||+|
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEEEE
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeEEE
Confidence 344455556788999999999999999999866699999999999999998876 237999999999887644 99999
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+++..+++. .....+++.+.+++++++.++.
T Consensus 113 ~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 113 LSSLALHYI--ASFDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp EEESCGGGC--SCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEchhhhhh--hhHHHHHHHHHHHcCCCcEEEE
Confidence 999988876 3455899999999986555555
No 73
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.68 E-value=2.8e-16 Score=110.20 Aligned_cols=103 Identities=16% Similarity=0.131 Sum_probs=86.9
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCC-cccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~ 125 (161)
++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++....+. ++.++.+|+.+++... +||+|+++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 5789999999999999999887656999999999999999999877633 6899999998877655 8999999988887
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
........+++.+.+.++++++++.
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 7655556899999999986555554
No 74
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.68 E-value=5e-16 Score=110.08 Aligned_cols=113 Identities=20% Similarity=0.089 Sum_probs=81.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccc-cccCCCcccE
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIR-NLEWRGHVDT 116 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~D~ 116 (161)
..+.......++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.++++.....+...+...+.. ......+||+
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~ 113 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDF 113 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSE
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccE
Confidence 3444455666788999999999999999999865 9999999999999999988764223333222220 0111238999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcC-CcEEEEec
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSLHK 151 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 151 (161)
|+++..+++.........+..+.++++ +.+++.+.
T Consensus 114 Vv~~~~l~~~~~~~~~~~l~~l~~lLPGG~l~lS~~ 149 (261)
T 3iv6_A 114 VLNDRLINRFTTEEARRACLGMLSLVGSGTVRASVK 149 (261)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred EEEhhhhHhCCHHHHHHHHHHHHHhCcCcEEEEEec
Confidence 999999988766666688999998885 33444443
No 75
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.68 E-value=3e-16 Score=109.93 Aligned_cols=102 Identities=15% Similarity=0.097 Sum_probs=87.2
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECC-CCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNP-PFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~-p~~~~ 126 (161)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+.++.+.++|+.+++...+||+|+++. .+++.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~ 115 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYI 115 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGGC
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCcccccc
Confidence 678999999999999999999864 9999999999999999999887778999999998876556899999998 88876
Q ss_pred C-CCcchHHHHHHHhhcCCcEEEEe
Q 031325 127 K-KGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 127 ~-~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. ......+++.+.+.+++++.++.
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 116 IDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3 24556899999999986555554
No 76
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.68 E-value=4.5e-16 Score=111.37 Aligned_cols=106 Identities=9% Similarity=0.182 Sum_probs=85.3
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC-----CCcccE
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-----RGHVDT 116 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-----~~~~D~ 116 (161)
...++.+|||+|||+|+.+..+++. +..+|+++|+++.+++.++++++..++ ++.++++|+.++.. ...||+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 4457889999999999999999984 336999999999999999999999988 89999999988654 348999
Q ss_pred EEECCCCCCCCC----------------CcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKK----------------GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|++|||+..... ....++++.+.+.+++++.++.
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 209 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVY 209 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 999999864311 3446889999999985444443
No 77
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=8.4e-16 Score=105.00 Aligned_cols=97 Identities=19% Similarity=0.158 Sum_probs=84.1
Q ss_pred CCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCCCC
Q 031325 49 NKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTRK 127 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~~~ 127 (161)
+.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.. ++.++++|+.+++... +||+|+++..+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHP----SVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCT----TSEEECCCGGGGGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCC----CCeEEeCcccccccCCCCeEEEEehhhHhcCC
Confidence 78999999999999999999865 99999999999999998743 5899999999987654 899999999998887
Q ss_pred CCcchHHHHHHHhhcCCcEEEEe
Q 031325 128 KGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
......+++.+.+.+++++.++.
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEE
Confidence 66777999999999986555554
No 78
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.68 E-value=9.1e-16 Score=109.54 Aligned_cols=115 Identities=19% Similarity=0.211 Sum_probs=94.2
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC
Q 031325 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR 111 (161)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~ 111 (161)
..+...+.......++.+|||+|||+|.++..+++.. ..+++|+|+++.+++.+++++...++ ++.+..+|+.+++..
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 102 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFE 102 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSC
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCC
Confidence 3444444444445678899999999999999999873 46999999999999999999998887 899999999987765
Q ss_pred C-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 112 G-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 112 ~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. +||+|+++..+++.... ..+++.+.++++++++++.
T Consensus 103 ~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHLQSP--EEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp TTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEE
T ss_pred CCCeeEEEEechhhhcCCH--HHHHHHHHHHcCCCcEEEE
Confidence 4 89999999998876443 4899999999986665555
No 79
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.68 E-value=1.4e-15 Score=109.06 Aligned_cols=100 Identities=18% Similarity=0.225 Sum_probs=85.1
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccccc-C-CCcccEEEECCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE-W-RGHVDTVVMNPPF 123 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~-~-~~~~D~i~~~~p~ 123 (161)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.+++++...++ ++.++++|+.+++ . ..+||+|+++.++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 467999999999999999999855 999999999999999999988876 6999999999987 2 3389999999998
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++.. ....+++.+.+++++++.++.
T Consensus 147 ~~~~--~~~~~l~~~~~~LkpgG~l~~ 171 (285)
T 4htf_A 147 EWVA--DPRSVLQTLWSVLRPGGVLSL 171 (285)
T ss_dssp GGCS--CHHHHHHHHHHTEEEEEEEEE
T ss_pred hccc--CHHHHHHHHHHHcCCCeEEEE
Confidence 8764 335899999999986555554
No 80
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.68 E-value=2.1e-15 Score=101.08 Aligned_cols=98 Identities=15% Similarity=0.210 Sum_probs=80.1
Q ss_pred cCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCCcccEEEECCC
Q 031325 44 FGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPP 122 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i~~~~p 122 (161)
....++.+|||+|||+|.++..+++ +..+++|+|+++.+++.+++++...++ ++.+.++|+.+......||+|+++++
T Consensus 31 ~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 31 LNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGT 109 (183)
T ss_dssp HCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSC
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCc
Confidence 3445778999999999999999998 566999999999999999999998887 89999999988333348999999988
Q ss_pred CCCCCCCcchHHHHHHHhhcCCcEEEE
Q 031325 123 FGTRKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
.....+++.+.+. +++..++
T Consensus 110 ------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 110 ------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp ------SCHHHHHHHHHHT-TCCEEEE
T ss_pred ------ccHHHHHHHHhhC-CCCEEEE
Confidence 3345788888888 6443333
No 81
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.68 E-value=2.5e-15 Score=107.80 Aligned_cols=104 Identities=11% Similarity=0.056 Sum_probs=84.2
Q ss_pred hhcCCCCCCeEEEecCCcchHH-HHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCCcccEEEE
Q 031325 42 NSFGDVSNKVVADFGCGCGTLG-AAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVM 119 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~G~~~-~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i~~ 119 (161)
......++.+|||+|||+|.++ +.+++....+|+|+|+|+.+++.|+++++..++ +++++++|+.+++ ..+||+|++
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-d~~FDvV~~ 194 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-GLEFDVLMV 194 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-GCCCSEEEE
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-CCCcCEEEE
Confidence 3456678999999999999766 455664445999999999999999999998887 8999999999876 348999998
Q ss_pred CCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 120 NPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 120 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+.. .....++++.+.+.+++++.++..
T Consensus 195 ~a~-----~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 195 AAL-----AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp CTT-----CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCC-----ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 543 245568999999999865555553
No 82
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.68 E-value=1.7e-15 Score=104.08 Aligned_cols=105 Identities=11% Similarity=0.037 Sum_probs=84.0
Q ss_pred HHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCC-cc
Q 031325 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HV 114 (161)
Q Consensus 37 ~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~-~~ 114 (161)
...+.......++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++...++ ++++..+|+.+..... +|
T Consensus 66 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 66 VARMTELLELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence 3344444455678899999999999999999984 5999999999999999999998887 7999999998865443 89
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+|+++.++++... .+.+.+++++.++.
T Consensus 145 D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~ 172 (210)
T 3lbf_A 145 DAIIVTAAPPEIPT--------ALMTQLDEGGILVL 172 (210)
T ss_dssp EEEEESSBCSSCCT--------HHHHTEEEEEEEEE
T ss_pred cEEEEccchhhhhH--------HHHHhcccCcEEEE
Confidence 99999988766542 46778875555444
No 83
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.67 E-value=3.2e-16 Score=113.25 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=85.6
Q ss_pred CCCCeEEEecCCcchHHHHHHH--cCCCeEEEEeCChHHHHHHHHHHhhc---CCceEEEEcccccccCC-------Ccc
Q 031325 47 VSNKVVADFGCGCGTLGAAATL--LGADQVIAIDIDSDSLELASENAADL---ELDIDFVQCDIRNLEWR-------GHV 114 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~--~~~~~v~~~D~~~~~~~~a~~~~~~~---~~~~~~~~~d~~~~~~~-------~~~ 114 (161)
.++.+|||+|||+|..+..+++ .+..+++|+|+|+.+++.+++++... ..++.++++|+.+++.. .+|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 3678999999999999999996 34669999999999999999998876 23899999999986643 389
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+|+++..+++. ....+++++.+.+++++.++.
T Consensus 115 D~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 115 DMITAVECAHWF---DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEE
Confidence 999999999887 556999999999986555544
No 84
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=1e-15 Score=109.37 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=83.5
Q ss_pred CCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCCcccEEEECCCC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPF 123 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i~~~~p~ 123 (161)
..++.+|||+|||+|.+++.+++. +..+|+|+|+++.+++.++++++.+++ ++.++++|+.+.+....||+|+++||+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 446789999999999999999987 355999999999999999999999988 889999999988322389999999996
Q ss_pred CCCCCCcchHHHHHHHhhcCC--cEEEEec
Q 031325 124 GTRKKGVDMDFLSMALKVASQ--AVYSLHK 151 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 151 (161)
...+++..+.+.+++ .+++.|.
T Consensus 197 ------~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 334788888888874 4555554
No 85
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.67 E-value=8.2e-16 Score=112.73 Aligned_cols=97 Identities=20% Similarity=0.171 Sum_probs=79.9
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-c--eEEEEcccccccC-----CCcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-D--IDFVQCDIRNLEW-----RGHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~--~~~~~~d~~~~~~-----~~~~D~i~~ 119 (161)
++.+|||+|||+|.+++.+++.+. +|+++|+|+.+++.+++|++.+++ + +.++++|+.++.. ..+||+|++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 567999999999999999999876 999999999999999999998887 3 8999999988643 238999999
Q ss_pred CCCCCCCC-C-------CcchHHHHHHHhhcCCc
Q 031325 120 NPPFGTRK-K-------GVDMDFLSMALKVASQA 145 (161)
Q Consensus 120 ~~p~~~~~-~-------~~~~~~~~~~~~~~~~~ 145 (161)
|||+.... . ....+++..+.+.++++
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lkpg 265 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPK 265 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTT
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 99953322 1 12357888888999743
No 86
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.67 E-value=8.8e-16 Score=106.02 Aligned_cols=105 Identities=19% Similarity=0.197 Sum_probs=82.8
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccccccc--CC-CcccEEEECCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE--WR-GHVDTVVMNPP 122 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~-~~~D~i~~~~p 122 (161)
++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++...++ ++.++++|+.+++ .. ..||.|+++.|
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5679999999999999999986 456999999999999999999998888 8999999998864 22 38999988755
Q ss_pred CCCC------CCCcchHHHHHHHhhcCCcEEEEecc
Q 031325 123 FGTR------KKGVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 123 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
-.+. ..-....+++.+.+.|++++.++...
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 3221 11224578999999998655555433
No 87
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.67 E-value=1.1e-15 Score=114.50 Aligned_cols=105 Identities=24% Similarity=0.336 Sum_probs=85.0
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccccC-----CCcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEW-----RGHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~-----~~~~D~i~~ 119 (161)
++.+|||+|||+|.+++.+++.+..+|+++|+|+.+++.|++|++.+++ +++++++|+.+... ..+||+|++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 6789999999999999999998767999999999999999999999887 79999999988643 238999999
Q ss_pred CCCCCCCCC-------CcchHHHHHHHhhcCC--cEEEEecc
Q 031325 120 NPPFGTRKK-------GVDMDFLSMALKVASQ--AVYSLHKT 152 (161)
Q Consensus 120 ~~p~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~~ 152 (161)
|||+..... ....+.+..+.+.+++ .+++.++.
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999754321 3344778888888874 34444443
No 88
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.67 E-value=1.4e-15 Score=109.21 Aligned_cols=105 Identities=19% Similarity=0.218 Sum_probs=89.4
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCC
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPP 122 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p 122 (161)
...++.+|||+|||+|.++..+++. + ..+++|+|+|+.+++.++++....+.++++.++|+.+++...+||+|+++..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAF 98 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESC
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECCh
Confidence 3456789999999999999999986 2 3599999999999999999998877789999999999776559999999998
Q ss_pred CCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 123 FGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+++... ...+++++.+.++++++++..
T Consensus 99 l~~~~~--~~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 99 LLHMTT--PETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp GGGCSS--HHHHHHHHHHTEEEEEEEEEE
T ss_pred hhcCCC--HHHHHHHHHHHcCCCCEEEEE
Confidence 887643 348999999999977766654
No 89
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.67 E-value=3.1e-15 Score=104.53 Aligned_cols=113 Identities=9% Similarity=0.097 Sum_probs=89.0
Q ss_pred ChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccc
Q 031325 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDI 105 (161)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 105 (161)
.+.....+...+... ++.+|||+|||+|..+..+++. +..+++++|+++.+++.|+++++..++ ++.++.+|+
T Consensus 56 ~~~~~~~l~~~~~~~----~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 131 (232)
T 3ntv_A 56 DRLTLDLIKQLIRMN----NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNA 131 (232)
T ss_dssp CHHHHHHHHHHHHHH----TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCG
T ss_pred CHHHHHHHHHHHhhc----CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH
Confidence 344444444433333 6789999999999999999984 256999999999999999999998887 799999999
Q ss_pred ccccC---CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 106 RNLEW---RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 106 ~~~~~---~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+... ..+||+|+++.+. .....+++.+.+.++++++++.
T Consensus 132 ~~~~~~~~~~~fD~V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 132 LEQFENVNDKVYDMIFIDAAK-----AQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp GGCHHHHTTSCEEEEEEETTS-----SSHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHhhccCCccEEEEcCcH-----HHHHHHHHHHHHhcCCCeEEEE
Confidence 88543 3489999998763 3355889999999986666665
No 90
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=6.2e-16 Score=108.22 Aligned_cols=104 Identities=10% Similarity=0.044 Sum_probs=81.3
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc--cCCC-cccEEEEC-CC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL--EWRG-HVDTVVMN-PP 122 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~~-~~D~i~~~-~p 122 (161)
.++.+|||+|||+|.++..+++.+..+++|+|+|+.+++.|+++....+.++.++++|+.++ +... +||+|+++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 36789999999999999999886556999999999999999999887777899999999887 5544 89999993 22
Q ss_pred CCC--CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 123 FGT--RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 123 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
... ........++.++.++|++++.++.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 111 1112223568999999997666664
No 91
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.67 E-value=1e-15 Score=108.09 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=81.9
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC----CcccEEEEC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----GHVDTVVMN 120 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~----~~~D~i~~~ 120 (161)
.++.+|||+|||+|..++.++.. +..+|+++|+++.+++.++++++..++ +++++++|+.++... .+||+|+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 45789999999999999999986 556999999999999999999999998 799999999987642 389999996
Q ss_pred CCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 121 PPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 121 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.. ......++.+.+.+++++.++.
T Consensus 159 a~------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 159 AV------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp SS------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred Cc------CCHHHHHHHHHHHcCCCeEEEE
Confidence 43 1234788899999986665554
No 92
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=8.9e-16 Score=105.13 Aligned_cols=110 Identities=28% Similarity=0.292 Sum_probs=87.1
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR 111 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~ 111 (161)
...+...+... ..++.+|||+|||+|.++..+++.+..+++|+|+++.+++.+++++...+. ++.+..+|+.+...
T Consensus 47 ~~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 123 (205)
T 3grz_A 47 TQLAMLGIERA--MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVD- 123 (205)
T ss_dssp HHHHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCC-
T ss_pred HHHHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCC-
Confidence 33444444432 236789999999999999999988767999999999999999999998887 59999999987543
Q ss_pred CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 112 GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 112 ~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+||+|++++++++. ..+++.+.+.++++++++.
T Consensus 124 ~~fD~i~~~~~~~~~-----~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 124 GKFDLIVANILAEIL-----LDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp SCEEEEEEESCHHHH-----HHHGGGSGGGEEEEEEEEE
T ss_pred CCceEEEECCcHHHH-----HHHHHHHHHhcCCCCEEEE
Confidence 489999999987542 4778888888885555544
No 93
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.66 E-value=2.7e-15 Score=106.18 Aligned_cols=119 Identities=20% Similarity=0.257 Sum_probs=92.4
Q ss_pred ChhHHHHHHHHHHh-hcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccc
Q 031325 29 GPHIASRMLYTAEN-SFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (161)
Q Consensus 29 ~~~~~~~~~~~~~~-~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~ 107 (161)
+......+...+.. .....++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.+++++.....++.+..+|+.+
T Consensus 19 ~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~ 97 (263)
T 2yqz_A 19 PPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARA 97 (263)
T ss_dssp CHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTS
T ss_pred ChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEccccc
Confidence 34555566665543 2233467899999999999999999875 499999999999999999873222379999999988
Q ss_pred ccCCC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 108 LEWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 108 ~~~~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++... +||+|+++..+++.. .....++++.+.+++++.++.
T Consensus 98 ~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~ 139 (263)
T 2yqz_A 98 IPLPDESVHGVIVVHLWHLVP--DWPKVLAEAIRVLKPGGALLE 139 (263)
T ss_dssp CCSCTTCEEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCeeEEEECCchhhcC--CHHHHHHHHHHHCCCCcEEEE
Confidence 77544 899999999988865 345899999999986555444
No 94
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.66 E-value=5.7e-16 Score=111.49 Aligned_cols=104 Identities=14% Similarity=0.091 Sum_probs=85.1
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-----ceEEEEccccccc---CC-CcccEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-----DIDFVQCDIRNLE---WR-GHVDTV 117 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~~---~~-~~~D~i 117 (161)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+. ++.+..+|+.+++ .. .+||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 3678999999999999999999866 999999999999999988744322 6789999998876 33 489999
Q ss_pred EEC-CCCCCCCC-----CcchHHHHHHHhhcCCcEEEEec
Q 031325 118 VMN-PPFGTRKK-----GVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 118 ~~~-~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
++. ..+++... .....+++++.+.|+++++++..
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 998 67877654 44668999999999976666653
No 95
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.66 E-value=3.2e-16 Score=109.83 Aligned_cols=104 Identities=9% Similarity=-0.016 Sum_probs=84.0
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC--CC-cccEEEECCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--RG-HVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--~~-~~D~i~~~~p~ 123 (161)
.++.+|||+|||+|..+..+++....+++|+|+|+.+++.|+++....+.++.++.+|+.+... .. +||.|++++..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 4788999999999999999998755699999999999999999998888788999999876532 22 89999998765
Q ss_pred CCC---CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTR---KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
... .......+++++.|+||+++.+++
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 432 233445788999999996655554
No 96
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.66 E-value=1.4e-15 Score=103.80 Aligned_cols=99 Identities=15% Similarity=0.105 Sum_probs=82.3
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~~ 126 (161)
++ +|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+.++.+..+|+.+.+... .||+|+++. .+.
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~ 105 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHL 105 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcC
Confidence 45 999999999999999998865 9999999999999999999887778999999998876544 899999953 333
Q ss_pred CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 127 KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.......+++.+.+.++++++++.
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~ 129 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFIL 129 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 444566899999999986555554
No 97
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.66 E-value=1.2e-15 Score=121.37 Aligned_cols=119 Identities=17% Similarity=0.205 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhh------cCC-ceEEE
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAAD------LEL-DIDFV 101 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~--~~v~~~D~~~~~~~~a~~~~~~------~~~-~~~~~ 101 (161)
.........+...+...++.+|||+|||+|.++..+++.+. .+|+|+|+++.+++.|++++.. .+. ++.++
T Consensus 704 PL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefi 783 (950)
T 3htx_A 704 PLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLY 783 (950)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEE
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEE
Confidence 34334444444443444788999999999999999999752 5999999999999999986653 244 79999
Q ss_pred EcccccccCCC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 102 QCDIRNLEWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 102 ~~d~~~~~~~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++|+.+++... .||+|++...++|........+++.+.+.++++ .++.
T Consensus 784 qGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LII 832 (950)
T 3htx_A 784 DGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIV 832 (950)
T ss_dssp ESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEE
T ss_pred ECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEE
Confidence 99999987764 999999999999887666667899999999976 4444
No 98
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.66 E-value=8.8e-16 Score=114.14 Aligned_cols=121 Identities=20% Similarity=0.278 Sum_probs=91.8
Q ss_pred CCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccc
Q 031325 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI 105 (161)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~ 105 (161)
...+.....+...+...... .+.+|||+|||+|.+++.+++. ..+|+|+|+++.+++.|++|++.+++ +++++.+|+
T Consensus 193 Q~n~~~~~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~ 270 (369)
T 3bt7_A 193 QPNAAMNIQMLEWALDVTKG-SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAA 270 (369)
T ss_dssp CSBHHHHHHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCS
T ss_pred cCCHHHHHHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCH
Confidence 34556667777777766443 3578999999999999999985 55999999999999999999999888 899999999
Q ss_pred ccccC--C---------------CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEeccCc
Q 031325 106 RNLEW--R---------------GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTST 154 (161)
Q Consensus 106 ~~~~~--~---------------~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (161)
.+... . ..||+|++|||+. +...+.++.+. -.+.++|+.|+..+
T Consensus 271 ~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~----g~~~~~~~~l~-~~g~ivyvsc~p~t 331 (369)
T 3bt7_A 271 EEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS----GLDSETEKMVQ-AYPRILYISCNPET 331 (369)
T ss_dssp HHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT----CCCHHHHHHHT-TSSEEEEEESCHHH
T ss_pred HHHHHHHhhccccccccccccccCCCCEEEECcCcc----ccHHHHHHHHh-CCCEEEEEECCHHH
Confidence 77531 1 1699999999964 33334444443 22358888887543
No 99
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.66 E-value=6.3e-16 Score=111.72 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=85.4
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC----CceEEEEcccccccCCCcccEEEEC-CC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE----LDIDFVQCDIRNLEWRGHVDTVVMN-PP 122 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~D~i~~~-~p 122 (161)
++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++....+ .++.++++|+.+++...+||+|++. ..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGS 160 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCcc
Confidence 344999999999999999999864 99999999999999999998766 4799999999998775699999864 44
Q ss_pred CCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 123 FGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+++........+++++.+.+++++.++..
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 66655555679999999999866666553
No 100
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.66 E-value=1.2e-15 Score=113.65 Aligned_cols=117 Identities=9% Similarity=0.068 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHh-------hcCC---ceE
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAA-------DLEL---DID 99 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~-------~~~~---~~~ 99 (161)
+.....+..++......++.+|||+|||+|.+++.++.. +..+++|+|+++.+++.|+++.+ ..|+ +++
T Consensus 156 Et~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 156 ETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 235 (438)
T ss_dssp GTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 445555666666667778999999999999999999865 55579999999999999987653 2342 799
Q ss_pred EEEcccccccCCC---cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 100 FVQCDIRNLEWRG---HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 100 ~~~~d~~~~~~~~---~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++++|+.+++... .||+|++|+++.. ......+.++.+.|++++.++.
T Consensus 236 fi~GD~~~lp~~d~~~~aDVVf~Nn~~F~---pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 236 LERGDFLSEEWRERIANTSVIFVNNFAFG---PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp EEECCTTSHHHHHHHHTCSEEEECCTTCC---HHHHHHHHHHHTTSCTTCEEEE
T ss_pred EEECcccCCccccccCCccEEEEcccccC---chHHHHHHHHHHcCCCCcEEEE
Confidence 9999999876532 6999999988753 3445778889999986666665
No 101
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.66 E-value=1.6e-15 Score=111.94 Aligned_cols=103 Identities=21% Similarity=0.182 Sum_probs=86.6
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC-CcccEEEECCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~~D~i~~~~p~ 123 (161)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|+++++..++ +++++++|+.+++.. .+||+|+++++.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 46789999999999999999998777999999995 99999999998888 499999999998665 399999999874
Q ss_pred CCC-CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTR-KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
... .......++..+.+.|++++.++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 443 445555788888999987766654
No 102
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.66 E-value=6e-16 Score=108.60 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=81.4
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC----CcccEEEECC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----GHVDTVVMNP 121 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~----~~~D~i~~~~ 121 (161)
++.+|||+|||+|..+..++.. +..+|+|+|+++.+++.++++.+..++ +++++++|+.+++.. .+||+|+++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 6789999999999999999864 445999999999999999999998888 899999999887642 3899999976
Q ss_pred CCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 122 PFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 122 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
. .....+++.+.+.+++++.++..
T Consensus 150 ~------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 150 V------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp C------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred c------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 3 33458899999999865555543
No 103
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.66 E-value=4.9e-16 Score=118.94 Aligned_cols=115 Identities=18% Similarity=0.192 Sum_probs=91.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCC
Q 031325 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG 112 (161)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~ 112 (161)
.+...+.......++.+|||+|||+|.+++.+++.+..+|+|+|+++ +++.|+++++..++ +++++.+|+.+++...
T Consensus 145 ~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~ 223 (480)
T 3b3j_A 145 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 223 (480)
T ss_dssp HHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCC
Confidence 33444454444457789999999999999999988767999999998 99999999998887 6999999999875545
Q ss_pred cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 113 HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 113 ~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+||+|++++++.+.........+..+.+.|++++.++.
T Consensus 224 ~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 224 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 89999999995554444445677788888886666654
No 104
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.66 E-value=4.1e-16 Score=114.86 Aligned_cols=104 Identities=17% Similarity=0.259 Sum_probs=84.7
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~ 124 (161)
..++.+|||+|||+|.++..+++.+ ..+++++|+|+.+++.+++++...+++..+..+|+.+.. ..+||+|+++|||+
T Consensus 194 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 194 PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-KGRFDMIISNPPFH 272 (343)
T ss_dssp TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-CSCEEEEEECCCCC
T ss_pred cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-cCCeeEEEECCCcc
Confidence 3356799999999999999999874 349999999999999999999988877788999997754 34899999999998
Q ss_pred CC---CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 125 TR---KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 125 ~~---~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+. .......+++.+.+.+++++.++.
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 63 223345889999999985444444
No 105
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.66 E-value=8.7e-16 Score=105.27 Aligned_cols=102 Identities=17% Similarity=0.141 Sum_probs=83.4
Q ss_pred CCCeEEEecCCcchHHH-HHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGA-AATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~-~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~ 125 (161)
++.+|||+|||+|..+. .+++.+ .+++|+|+|+.+++.++++....+.++.+.++|+.+++... +||+|+++.++++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDG-YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTT-CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 56899999999999854 444444 49999999999999999998876667899999999877544 8999999888877
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
........+++++.+.+++++.++.
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 6556667899999999986555544
No 106
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.66 E-value=1.7e-15 Score=106.08 Aligned_cols=101 Identities=25% Similarity=0.332 Sum_probs=84.6
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECC-CCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNP-PFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~-p~~~~ 126 (161)
++.+|||+|||+|.++..+++. .+++|+|+++.+++.++++....+.++.+.++|+.+.+...+||+|+++. ++++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNYL 110 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGGC
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhhc
Confidence 4589999999999999999987 59999999999999999998877667899999998876656899999976 66665
Q ss_pred -CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 127 -KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 127 -~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
........++.+.+.+++++.++.
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 334555889999999986555554
No 107
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.66 E-value=3.3e-15 Score=103.75 Aligned_cols=115 Identities=10% Similarity=0.001 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEccc
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDI 105 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~d~ 105 (161)
.....++..+....+..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|+++++..++ +++++.+|+
T Consensus 39 ~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda 118 (221)
T 3dr5_A 39 EMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRP 118 (221)
T ss_dssp HHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH
T ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCH
Confidence 344455555555544444559999999999999999985 2 46999999999999999999998876 499999999
Q ss_pred ccccC---CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 106 RNLEW---RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 106 ~~~~~---~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+... ..+||+|+++.+. .....+++.+.+.++++++++.
T Consensus 119 ~~~l~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 119 LDVMSRLANDSYQLVFGQVSP-----MDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp HHHGGGSCTTCEEEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHhcCCCcCeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEE
Confidence 87532 2389999998763 3445789999999997666666
No 108
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.65 E-value=1.8e-15 Score=108.94 Aligned_cols=104 Identities=16% Similarity=0.095 Sum_probs=86.8
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC--CCcccEEEECCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW--RGHVDTVVMNPP 122 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~~D~i~~~~p 122 (161)
.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++....+. ++.++++|+.+.+. ..+||+|+++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 46789999999999999999887766999999999999999999988765 68999999998765 238999999888
Q ss_pred CCC--CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 123 FGT--RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 123 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+++ ........+++.+.+++++++.++.
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 766 3344556899999999986555554
No 109
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.65 E-value=6.4e-16 Score=112.06 Aligned_cols=105 Identities=20% Similarity=0.105 Sum_probs=87.4
Q ss_pred CCCCCeEEEecCCcchHHHHHH--HcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECC
Q 031325 46 DVSNKVVADFGCGCGTLGAAAT--LLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNP 121 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la--~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~ 121 (161)
..++.+|||+|||+|..+..++ ..+..+++|+|+++.+++.+++++...++ +++++++|+.+++...+||+|+++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 3467899999999999999985 33456999999999999999999998887 4999999999987556999999999
Q ss_pred CCCCCCCC-cchHHHHHHHhhcCCcEEEEe
Q 031325 122 PFGTRKKG-VDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 122 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++++.... ....+++++.+.++++++++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 98876433 333589999999986666654
No 110
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.65 E-value=1.3e-15 Score=113.71 Aligned_cols=101 Identities=19% Similarity=0.193 Sum_probs=78.2
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccccC-----CCcccEEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEW-----RGHVDTVV 118 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~-----~~~~D~i~ 118 (161)
.++.+|||+|||+|.+++.+++.+..+|+++|+|+.+++.|++|++.+++ +++++++|+.+... ..+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 36789999999999999999997766999999999999999999999887 68999999987432 12799999
Q ss_pred ECCCCCCCCC---C----cchHHHHHHHhhcCCcEE
Q 031325 119 MNPPFGTRKK---G----VDMDFLSMALKVASQAVY 147 (161)
Q Consensus 119 ~~~p~~~~~~---~----~~~~~~~~~~~~~~~~~~ 147 (161)
+|||+..... . ...+++..+.+.++++++
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~ 326 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGL 326 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 9999842211 1 122345666788874333
No 111
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.65 E-value=2.8e-15 Score=109.79 Aligned_cols=102 Identities=21% Similarity=0.246 Sum_probs=84.7
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC-CcccEEEECCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~~D~i~~~~p~ 123 (161)
.++.+|||+|||+|.++..+++.+..+|+|+|++ .+++.|+++++..++ +++++.+|+.+++.. .+||+|+++++.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 3678999999999999999999876799999999 599999999998887 699999999987665 489999999885
Q ss_pred CCC-CCCcchHHHHHHHhhcCCcEEEE
Q 031325 124 GTR-KKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 124 ~~~-~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
+.. .......++..+.+.+++++.++
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 443 34444578888889998666665
No 112
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=3e-15 Score=105.77 Aligned_cols=110 Identities=20% Similarity=0.151 Sum_probs=88.1
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCc
Q 031325 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGH 113 (161)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (161)
.....+.......++.+|||+|||+|.++..+++. +..+++|+|+++.+++.++++. .++.+..+|+.+++...+
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~ 95 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----PNTNFGKADLATWKPAQK 95 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----TTSEEEECCTTTCCCSSC
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----CCcEEEECChhhcCccCC
Confidence 33445555556667889999999999999999886 3459999999999999998872 268999999998774348
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
||+|+++.++++.. .....+.++.+.+++++.++.
T Consensus 96 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 96 ADLLYANAVFQWVP--DHLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp EEEEEEESCGGGST--THHHHHHHHGGGEEEEEEEEE
T ss_pred cCEEEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEE
Confidence 99999999988873 345899999999986555554
No 113
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.65 E-value=3.1e-15 Score=102.46 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=80.9
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCCcccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i~~~~p~~~ 125 (161)
++.+|||+|||+|..+..+++. +..+++++|+++.+++.+++++...++ ++.+..+|+.+.....+||+|+++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF--- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc---
Confidence 4679999999999999999986 456999999999999999999998887 69999999988764458999998653
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.....+++.+.+.++++++++.
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~ 163 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYA 163 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEE
Confidence 2234889999999986555554
No 114
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.65 E-value=6.1e-15 Score=114.18 Aligned_cols=130 Identities=18% Similarity=0.145 Sum_probs=99.9
Q ss_pred CcccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc----CCCeEEEEeCChHHHHHHHHHHhhc
Q 031325 19 PKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----GADQVIAIDIDSDSLELASENAADL 94 (161)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~----~~~~v~~~D~~~~~~~~a~~~~~~~ 94 (161)
.+...+.|.||.+++..|+..+.....+.++.+|+|+|||+|.+++.+++. +...++|+|+++.++.+|+.|+..+
T Consensus 192 ~~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~ 271 (542)
T 3lkd_A 192 SGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH 271 (542)
T ss_dssp ---CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred hcccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc
Confidence 355678999999999999998875433446789999999999999988875 2459999999999999999999888
Q ss_pred CC---ceEEEEccccccc--C--CCcccEEEECCCCCCCCCC---------------------cchHHHHHHHhhcC-Cc
Q 031325 95 EL---DIDFVQCDIRNLE--W--RGHVDTVVMNPPFGTRKKG---------------------VDMDFLSMALKVAS-QA 145 (161)
Q Consensus 95 ~~---~~~~~~~d~~~~~--~--~~~~D~i~~~~p~~~~~~~---------------------~~~~~~~~~~~~~~-~~ 145 (161)
|+ ++.+.++|....+ . ...||+|++||||...... ....|+..+.+.++ ++
T Consensus 272 gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~g 351 (542)
T 3lkd_A 272 GVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDN 351 (542)
T ss_dssp TCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTT
T ss_pred CCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCc
Confidence 87 5789999998763 2 2289999999999743110 01247888999888 54
Q ss_pred EEE
Q 031325 146 VYS 148 (161)
Q Consensus 146 ~~~ 148 (161)
+.+
T Consensus 352 Gr~ 354 (542)
T 3lkd_A 352 GVM 354 (542)
T ss_dssp CEE
T ss_pred eeE
Confidence 433
No 115
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.65 E-value=1.1e-15 Score=105.10 Aligned_cols=97 Identities=16% Similarity=0.114 Sum_probs=83.2
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRK 127 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~ 127 (161)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++. ++.+..+|+.+++...+||+|+++..+++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 116 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-----GRPVRTMLFHQLDAIDAYDAVWAHACLLHVP 116 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCCCCSCEEEEEECSCGGGSC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-----CCceEEeeeccCCCCCcEEEEEecCchhhcC
Confidence 578999999999999999999855 9999999999999999887 3678899998887445999999999998877
Q ss_pred CCcchHHHHHHHhhcCCcEEEEe
Q 031325 128 KGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
......+++.+.+.++++++++.
T Consensus 117 ~~~~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 117 RDELADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEE
Confidence 56667899999999985555544
No 116
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.64 E-value=1.7e-15 Score=107.28 Aligned_cols=98 Identities=23% Similarity=0.223 Sum_probs=81.6
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
.++.+|||+|||+|.+++.+++.+. +++|+|+++.+++.++++...+++.+.+..+|+.+.....+||+|++|++.++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~~- 196 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAEL- 196 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHHH-
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHHH-
Confidence 4678999999999999999999877 99999999999999999999887778899999887432348999999987543
Q ss_pred CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 127 KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
....+..+.+.++++++++.
T Consensus 197 ----~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 197 ----HAALAPRYREALVPGGRALL 216 (254)
T ss_dssp ----HHHHHHHHHHHEEEEEEEEE
T ss_pred ----HHHHHHHHHHHcCCCCEEEE
Confidence 34788999999986555544
No 117
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.64 E-value=1.1e-15 Score=114.54 Aligned_cols=101 Identities=23% Similarity=0.231 Sum_probs=83.2
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC-----CCcccEEEEC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW-----RGHVDTVVMN 120 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-----~~~~D~i~~~ 120 (161)
++.+|||+|||+|.+++.+++.+..+|+++|+++.+++.+++++..+++ ++.++++|+.+... ..+||+|++|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 6789999999999999999998667999999999999999999999888 79999999987643 2389999999
Q ss_pred CCCCCCCC-------CcchHHHHHHHhhcCCcEEE
Q 031325 121 PPFGTRKK-------GVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 121 ~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 148 (161)
||+..... ....+++..+.+.+++++.+
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 331 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGIL 331 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 99765433 22346778888888754433
No 118
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.64 E-value=2.1e-15 Score=107.04 Aligned_cols=111 Identities=14% Similarity=0.074 Sum_probs=88.4
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (161)
...+...+.... .++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++.. ++.++++|+.+++...
T Consensus 37 ~~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~ 109 (263)
T 3pfg_A 37 AADLAALVRRHS--PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP----DAVLHHGDMRDFSLGR 109 (263)
T ss_dssp HHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT----TSEEEECCTTTCCCSC
T ss_pred HHHHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC----CCEEEECChHHCCccC
Confidence 344444444432 2568999999999999999999865 99999999999999998864 5899999999987755
Q ss_pred cccEEEECC-CCCCCCC-CcchHHHHHHHhhcCCcEEEEe
Q 031325 113 HVDTVVMNP-PFGTRKK-GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 113 ~~D~i~~~~-p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+||+|+++. ++++... .....+++++.+.+++++.++.
T Consensus 110 ~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i 149 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVV 149 (263)
T ss_dssp CEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999999987 8877633 4555889999999986666655
No 119
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.64 E-value=2.4e-15 Score=103.54 Aligned_cols=100 Identities=15% Similarity=0.095 Sum_probs=83.3
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCCcccEEEECCCCC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i~~~~p~~ 124 (161)
..++.+|||+|||+|.++..+++.+. +++|+|+++.+++.+++ .+. ++.++++|+.++....+||+|+++..++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~ 118 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLA 118 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCCCSSCEEEEEEESCGG
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCCCCCceeEEEEechhh
Confidence 34567999999999999999999855 99999999999999987 343 7999999999884444999999999988
Q ss_pred CCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 125 TRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+........+++++.+.+++++.++.
T Consensus 119 ~~~~~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 119 HVPDDRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 87665456899999999986555444
No 120
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=3.7e-15 Score=105.30 Aligned_cols=106 Identities=21% Similarity=0.208 Sum_probs=87.0
Q ss_pred HHHhhcCCCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC-c-eEEEEcccccccCCCcc
Q 031325 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL-D-IDFVQCDIRNLEWRGHV 114 (161)
Q Consensus 39 ~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~~~~~ 114 (161)
.+.......++.+|||+|||+|.++..+++. + ..+++++|+++.+++.|+++++..++ + +++..+|+.+.....+|
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 163 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENV 163 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSE
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCc
Confidence 4444555668889999999999999999987 3 56999999999999999999998887 4 99999999876444489
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
|+|++++|.. ..+++.+.+.+++++.++..
T Consensus 164 D~v~~~~~~~-------~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 164 DHVILDLPQP-------ERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp EEEEECSSCG-------GGGHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCCCH-------HHHHHHHHHHcCCCCEEEEE
Confidence 9999988722 37899999999865555543
No 121
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=104.74 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=83.2
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~ 125 (161)
.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++.... .++.+..+|+.+++... +||+|++++++++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 467899999999999999999986559999999999999999987642 27899999998876544 8999999988755
Q ss_pred CC-------------CCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RK-------------KGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.. ......+++.+.+.+++++.++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 157 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFIS 157 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEE
Confidence 43 22345889999999985555444
No 122
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.64 E-value=2.4e-15 Score=111.54 Aligned_cols=103 Identities=20% Similarity=0.176 Sum_probs=85.1
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~~ 124 (161)
.++++|||+|||+|.+++.+|+.|..+|+++|.|+ +++.|+++++.+++ +++++++++.++...+++|+|++.+.-.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGY 160 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBT
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccc
Confidence 47899999999999999999998888999999986 88999999999988 6999999999987767999999976633
Q ss_pred C-CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 125 T-RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 125 ~-~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. ..+.....++....+.|++++.++.
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 2 2444555677777788886665554
No 123
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=6.7e-16 Score=109.62 Aligned_cols=104 Identities=16% Similarity=0.104 Sum_probs=83.9
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cc
Q 031325 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HV 114 (161)
Q Consensus 36 ~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~ 114 (161)
+...+.......++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.++++. ++.++++|+.+++... +|
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~~~~~~~~f 95 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAENLALPDKSV 95 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT-----TEEEECCCTTSCCSCTTCB
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc-----CCEEEECchhhCCCCCCCE
Confidence 34444444455678899999999999999999865 59999999999998776554 6899999999877654 99
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEE
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (161)
|+|++...+++. ......++++.+.++ ++++
T Consensus 96 D~v~~~~~l~~~--~~~~~~l~~~~~~Lk-gG~~ 126 (261)
T 3ege_A 96 DGVISILAIHHF--SHLEKSFQEMQRIIR-DGTI 126 (261)
T ss_dssp SEEEEESCGGGC--SSHHHHHHHHHHHBC-SSCE
T ss_pred eEEEEcchHhhc--cCHHHHHHHHHHHhC-CcEE
Confidence 999999988876 444589999999999 5533
No 124
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.64 E-value=1e-15 Score=110.31 Aligned_cols=101 Identities=21% Similarity=0.292 Sum_probs=79.6
Q ss_pred cccccC-CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCce
Q 031325 20 KVELEQ-YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDI 98 (161)
Q Consensus 20 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~ 98 (161)
+..+++ |..++.+...+++.+ ...++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++...+ ++
T Consensus 25 ~k~~GQnfL~d~~i~~~Iv~~l----~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~~-~v 98 (295)
T 3gru_A 25 KKKLGQCFLIDKNFVNKAVESA----NLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELYN-NI 98 (295)
T ss_dssp -----CCEECCHHHHHHHHHHT----TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCS-SE
T ss_pred ccccCccccCCHHHHHHHHHhc----CCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccCC-Ce
Confidence 334444 666777766665544 44578899999999999999999984 599999999999999999987332 79
Q ss_pred EEEEcccccccCCC-cccEEEECCCCCCC
Q 031325 99 DFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (161)
Q Consensus 99 ~~~~~d~~~~~~~~-~~D~i~~~~p~~~~ 126 (161)
+++++|+.+++... .||+|++|+||+..
T Consensus 99 ~vi~gD~l~~~~~~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 99 EIIWGDALKVDLNKLDFNKVVANLPYQIS 127 (295)
T ss_dssp EEEESCTTTSCGGGSCCSEEEEECCGGGH
T ss_pred EEEECchhhCCcccCCccEEEEeCccccc
Confidence 99999999877655 79999999999763
No 125
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.64 E-value=2.5e-15 Score=105.30 Aligned_cols=98 Identities=8% Similarity=0.125 Sum_probs=82.5
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++... ++.++++|+.++....+||+|++...+++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDAQLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGCCCSSCEEEEEEESCGGGC
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHcCcCCcccEEEEhhHHHhh
Confidence 3667999999999999999998765 999999999999999988764 689999999887544489999999888876
Q ss_pred CCCcchHHHHHHH-hhcCCcEEEEe
Q 031325 127 KKGVDMDFLSMAL-KVASQAVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~-~~~~~~~~~~~ 150 (161)
.. ...+++++. ++++++++++.
T Consensus 117 ~~--~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 117 DD--PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp SS--HHHHHHHHHHTTEEEEEEEEE
T ss_pred cC--HHHHHHHHHHHhcCCCCEEEE
Confidence 43 358999999 99986555554
No 126
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.64 E-value=2.2e-15 Score=109.23 Aligned_cols=105 Identities=14% Similarity=0.138 Sum_probs=79.2
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-------ceEEEEccc------cccc---CC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-------DIDFVQCDI------RNLE---WR 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-------~~~~~~~d~------~~~~---~~ 111 (161)
++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++....+. ++++.++|+ .++. ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4689999999999877776666556999999999999999998876553 256778877 3221 22
Q ss_pred CcccEEEECCCCCCC-CCCcchHHHHHHHhhcCCcEEEEecc
Q 031325 112 GHVDTVVMNPPFGTR-KKGVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 112 ~~~D~i~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
.+||+|+|...+++. ........++++.++|+++++++...
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 389999998776653 22334699999999999777766643
No 127
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.64 E-value=3.5e-15 Score=100.63 Aligned_cols=101 Identities=18% Similarity=0.210 Sum_probs=83.6
Q ss_pred cCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC-CcccEEEEC
Q 031325 44 FGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHVDTVVMN 120 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~~D~i~~~ 120 (161)
....++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++...+. ++.+..+|+.+.... ..||+|+++
T Consensus 29 ~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 107 (192)
T 1l3i_A 29 AEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVG 107 (192)
T ss_dssp HCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEES
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEEC
Confidence 345578899999999999999999876 6999999999999999999988876 789999999873222 389999999
Q ss_pred CCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 121 PPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 121 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.++++ ...+++.+.+.+++++.++.
T Consensus 108 ~~~~~-----~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 108 GSGGE-----LQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp CCTTC-----HHHHHHHHHHTEEEEEEEEE
T ss_pred CchHH-----HHHHHHHHHHhcCCCcEEEE
Confidence 88643 25889999999986555544
No 128
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.64 E-value=1.2e-15 Score=118.23 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=93.2
Q ss_pred cccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc----C---------------CCeEEEEeCC
Q 031325 20 KVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----G---------------ADQVIAIDID 80 (161)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~----~---------------~~~v~~~D~~ 80 (161)
+...+.|.+|..++..+++.+. +.++.+|+|+|||+|.+++.+++. + ...++|+|++
T Consensus 145 ~~~~G~fyTP~~iv~~mv~~l~----p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid 220 (541)
T 2ar0_A 145 KSGAGQYFTPRPLIKTIIHLLK----PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELV 220 (541)
T ss_dssp -----CCCCCHHHHHHHHHHHC----CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESC
T ss_pred cccCCeeeCCHHHHHHHHHHhc----cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCC
Confidence 3456789999998888776653 346789999999999999988763 1 1379999999
Q ss_pred hHHHHHHHHHHhhcCC-c-----eEEEEcccccccC--CCcccEEEECCCCCCCCC------------CcchHHHHHHHh
Q 031325 81 SDSLELASENAADLEL-D-----IDFVQCDIRNLEW--RGHVDTVVMNPPFGTRKK------------GVDMDFLSMALK 140 (161)
Q Consensus 81 ~~~~~~a~~~~~~~~~-~-----~~~~~~d~~~~~~--~~~~D~i~~~~p~~~~~~------------~~~~~~~~~~~~ 140 (161)
+.++++|+.++...++ . ..+.++|....+. ...||+|++||||+.... .....|+..+.+
T Consensus 221 ~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~ 300 (541)
T 2ar0_A 221 PGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIE 300 (541)
T ss_dssp HHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHH
Confidence 9999999999988777 3 7899999877543 238999999999986532 223478999999
Q ss_pred hcCCc
Q 031325 141 VASQA 145 (161)
Q Consensus 141 ~~~~~ 145 (161)
.++++
T Consensus 301 ~Lk~g 305 (541)
T 2ar0_A 301 TLHPG 305 (541)
T ss_dssp HEEEE
T ss_pred HhCCC
Confidence 99743
No 129
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.64 E-value=6.2e-15 Score=107.40 Aligned_cols=106 Identities=17% Similarity=0.227 Sum_probs=84.6
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC-CcccEEEEC
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR-GHVDTVVMN 120 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-~~~D~i~~~ 120 (161)
...++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++++.++ ++.++++|+.+++.. ..||+|++|
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 4557889999999999999999985 236999999999999999999999988 899999999887643 389999999
Q ss_pred CCCCCCC---C-C----------------cchHHHHHHHhhcCCcEEEEe
Q 031325 121 PPFGTRK---K-G----------------VDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 121 ~p~~~~~---~-~----------------~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|+.... . . .+.++++.+.+.+++++.++.
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~ 244 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVY 244 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 9964321 1 0 124788999999985444443
No 130
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.64 E-value=2.4e-15 Score=104.57 Aligned_cols=102 Identities=22% Similarity=0.356 Sum_probs=85.8
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC------ceEEEEcccccccCCC-cccEEEEC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIRNLEWRG-HVDTVVMN 120 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~-~~D~i~~~ 120 (161)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....++ ++.+..+|+.+++... +||+|+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 678999999999999999999855 999999999999999999887775 5799999999877644 89999999
Q ss_pred CCCCCCCC-CcchHHHHHHHhhcCCcEEEEe
Q 031325 121 PPFGTRKK-GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 121 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.++++... .....+++.+.+.+++++.++.
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 98887643 3344799999999986555544
No 131
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.64 E-value=7.1e-15 Score=101.85 Aligned_cols=98 Identities=10% Similarity=0.116 Sum_probs=81.4
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC------CcccEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR------GHVDTV 117 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~------~~~D~i 117 (161)
++.+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++...++ +++++++|+.+.... .+||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 5789999999999999999986 2 45999999999999999999998888 599999999764321 369999
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+++++. .....+++.+.+.++++++++.
T Consensus 138 ~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~ 165 (223)
T 3duw_A 138 FIDADK-----QNNPAYFEWALKLSRPGTVIIG 165 (223)
T ss_dssp EECSCG-----GGHHHHHHHHHHTCCTTCEEEE
T ss_pred EEcCCc-----HHHHHHHHHHHHhcCCCcEEEE
Confidence 998873 3445889999999986555554
No 132
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.63 E-value=4.8e-15 Score=102.79 Aligned_cols=98 Identities=20% Similarity=0.160 Sum_probs=82.0
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC-------CcccE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-------GHVDT 116 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-------~~~D~ 116 (161)
++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++++..++ +++++++|+.+.... .+||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 5679999999999999999986 2 56999999999999999999998887 499999999764221 47999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+++++ ......+++.+.+.++++++++.
T Consensus 144 v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 144 IYIDAD-----KANTDLYYEESLKLLREGGLIAV 172 (225)
T ss_dssp EEECSC-----GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECCC-----HHHHHHHHHHHHHhcCCCcEEEE
Confidence 999887 34455889999999987666655
No 133
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=7.9e-16 Score=110.16 Aligned_cols=100 Identities=19% Similarity=0.242 Sum_probs=82.9
Q ss_pred cCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCC
Q 031325 44 FGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPF 123 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~ 123 (161)
....++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.++++.. ++.+..+|+.+++...+||+|+++..+
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~fD~v~~~~~l 127 (279)
T 3ccf_A 53 LNPQPGEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNYP----HLHFDVADARNFRVDKPLDAVFSNAML 127 (279)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT----TSCEEECCTTTCCCSSCEEEEEEESCG
T ss_pred hCCCCCCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhCC----CCEEEECChhhCCcCCCcCEEEEcchh
Confidence 34457789999999999999999985 4599999999999999988762 578999999987765589999999998
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++.. ....++.++.++++++++++.
T Consensus 128 ~~~~--d~~~~l~~~~~~LkpgG~l~~ 152 (279)
T 3ccf_A 128 HWVK--EPEAAIASIHQALKSGGRFVA 152 (279)
T ss_dssp GGCS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred hhCc--CHHHHHHHHHHhcCCCcEEEE
Confidence 8764 344899999999986555554
No 134
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.63 E-value=6.7e-15 Score=102.62 Aligned_cols=105 Identities=12% Similarity=0.070 Sum_probs=81.7
Q ss_pred HhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccc----ccCCCccc
Q 031325 41 ENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN----LEWRGHVD 115 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~~~~D 115 (161)
.......++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.++++.+.. -++.++.+|+.+ .+....||
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D 145 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIVEKVD 145 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTSCCEE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccCccEE
Confidence 33334457789999999999999999987 5469999999999999999987655 379999999987 44335899
Q ss_pred EEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 116 TVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 116 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|+.+++ .......+++.+.+.++++++++.
T Consensus 146 ~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 146 VIYEDVA----QPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp EEEECCC----STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEecC----ChhHHHHHHHHHHHhCCCCcEEEE
Confidence 9997765 334445779999999985444443
No 135
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.63 E-value=7.2e-16 Score=116.19 Aligned_cols=97 Identities=23% Similarity=0.264 Sum_probs=74.8
Q ss_pred CcccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC
Q 031325 19 PKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL 96 (161)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~ 96 (161)
.+...++|.+++.+++.+++.+. ..++.+|||+|||+|.++..++++ ...+++|+|+++.+++.| .
T Consensus 14 ~~~~~g~~~TP~~l~~~~~~~~~----~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~ 81 (421)
T 2ih2_A 14 APRSLGRVETPPEVVDFMVSLAE----APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------P 81 (421)
T ss_dssp -------CCCCHHHHHHHHHHCC----CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------T
T ss_pred hcccCceEeCCHHHHHHHHHhhc----cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------C
Confidence 35567889999888888776553 235669999999999999999975 446999999999999877 2
Q ss_pred ceEEEEcccccccCCCcccEEEECCCCCCCC
Q 031325 97 DIDFVQCDIRNLEWRGHVDTVVMNPPFGTRK 127 (161)
Q Consensus 97 ~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~~ 127 (161)
++.++++|+.+......||+|++||||....
T Consensus 82 ~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~ 112 (421)
T 2ih2_A 82 WAEGILADFLLWEPGEAFDLILGNPPYGIVG 112 (421)
T ss_dssp TEEEEESCGGGCCCSSCEEEEEECCCCCCBS
T ss_pred CCcEEeCChhhcCccCCCCEEEECcCccCcc
Confidence 5899999998876555899999999997653
No 136
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.63 E-value=3.7e-15 Score=105.31 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=71.9
Q ss_pred HHHHHHHHHhhcCC--CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 031325 33 ASRMLYTAENSFGD--VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (161)
Q Consensus 33 ~~~~~~~~~~~~~~--~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~ 107 (161)
...++..+...... .++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|++++...++ ++.++++|+.+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (254)
T 2h00_A 48 YIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKT 127 (254)
T ss_dssp HHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTC
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhh
Confidence 34455555443332 25679999999999999998875 345999999999999999999998887 49999999765
Q ss_pred c---cCC----CcccEEEECCCCCCCC
Q 031325 108 L---EWR----GHVDTVVMNPPFGTRK 127 (161)
Q Consensus 108 ~---~~~----~~~D~i~~~~p~~~~~ 127 (161)
. +.. .+||+|++||||+...
T Consensus 128 ~~~~~~~~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 128 LLMDALKEESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp SSTTTSTTCCSCCBSEEEECCCCC---
T ss_pred hhhhhhhcccCCcccEEEECCCCccCc
Confidence 2 122 3799999999998643
No 137
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.63 E-value=4.8e-15 Score=103.72 Aligned_cols=105 Identities=18% Similarity=0.230 Sum_probs=85.7
Q ss_pred hhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEEC
Q 031325 42 NSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMN 120 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~ 120 (161)
......++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++.... ++.+.++|+.+++... +||+|+++
T Consensus 37 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~ 114 (243)
T 3bkw_A 37 AMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT--GITYERADLDKLHLPQDSFDLAYSS 114 (243)
T ss_dssp HHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS--SEEEEECCGGGCCCCTTCEEEEEEE
T ss_pred HhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC--CceEEEcChhhccCCCCCceEEEEe
Confidence 33444577899999999999999999886559999999999999999876543 5899999998876544 89999999
Q ss_pred CCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 121 PPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 121 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.++++.. .....++.+.+.+++++.++.
T Consensus 115 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 115 LALHYVE--DVARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp SCGGGCS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccc--hHHHHHHHHHHhcCcCcEEEE
Confidence 8888764 445899999999986555544
No 138
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.63 E-value=6.1e-15 Score=107.53 Aligned_cols=108 Identities=14% Similarity=0.085 Sum_probs=85.0
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC
Q 031325 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR 111 (161)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~ 111 (161)
.+...+.......++.+|||+|||+|.++..+++.+. .+|+|+|+++.+++.+++++...++ ++.+..+|+.+....
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 3344444455556788999999999999999998632 4699999999999999999998887 799999999885443
Q ss_pred -CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 112 -GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 112 -~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+||+|++++++++.. +.+.+.+++++.++.
T Consensus 142 ~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi 173 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIV 173 (317)
T ss_dssp GCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEE
T ss_pred CCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEE
Confidence 4899999999987654 456778875444444
No 139
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.63 E-value=1.2e-15 Score=110.35 Aligned_cols=101 Identities=24% Similarity=0.354 Sum_probs=75.0
Q ss_pred cccccC-CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-c
Q 031325 20 KVELEQ-YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-D 97 (161)
Q Consensus 20 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~ 97 (161)
...+++ +..++.+...+++.+ ...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.++++....+. +
T Consensus 17 ~k~~Gq~fl~~~~i~~~i~~~~----~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~~ 91 (299)
T 2h1r_A 17 LYFQGQHLLKNPGILDKIIYAA----KIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYNN 91 (299)
T ss_dssp ------CEECCHHHHHHHHHHH----CCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCCC
T ss_pred hhccccceecCHHHHHHHHHhc----CCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 334443 335666666665543 44577899999999999999999875 4999999999999999999887776 7
Q ss_pred eEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 98 IDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 98 ~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
++++.+|+.+.+.. .||+|++|+||+..
T Consensus 92 v~~~~~D~~~~~~~-~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 92 LEVYEGDAIKTVFP-KFDVCTANIPYKIS 119 (299)
T ss_dssp EEC----CCSSCCC-CCSEEEEECCGGGH
T ss_pred eEEEECchhhCCcc-cCCEEEEcCCcccc
Confidence 99999999887654 79999999999864
No 140
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.63 E-value=2e-15 Score=112.86 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=80.9
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC--CCcccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--RGHVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~i~~~~p~~~ 125 (161)
++.+|||+|||+|.+++.+++.+. .|+++|+|+.+++.+++|++.+++...+.++|+.+... ...||+|++|||+..
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 488999999999999999999876 59999999999999999999988865778999988542 225999999999744
Q ss_pred CCCC-------cchHHHHHHHhhcCCcEEEE
Q 031325 126 RKKG-------VDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 126 ~~~~-------~~~~~~~~~~~~~~~~~~~~ 149 (161)
.... ...+++..+.+.+++++.++
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv 323 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLW 323 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 3221 23467778888888655554
No 141
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.63 E-value=2.1e-15 Score=107.50 Aligned_cols=97 Identities=22% Similarity=0.247 Sum_probs=79.7
Q ss_pred cccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEE
Q 031325 22 ELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFV 101 (161)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~ 101 (161)
....|..++.+...+++.+. ..++ +|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++.. .+++++
T Consensus 25 ~GQnfL~d~~i~~~Iv~~~~----~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~--~~v~vi 96 (271)
T 3fut_A 25 FGQNFLVSEAHLRRIVEAAR----PFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG--LPVRLV 96 (271)
T ss_dssp SSCCEECCHHHHHHHHHHHC----CCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT--SSEEEE
T ss_pred CCccccCCHHHHHHHHHhcC----CCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC--CCEEEE
Confidence 34445567777777766553 3467 99999999999999999986 5999999999999999998763 379999
Q ss_pred EcccccccCCC--cccEEEECCCCCCC
Q 031325 102 QCDIRNLEWRG--HVDTVVMNPPFGTR 126 (161)
Q Consensus 102 ~~d~~~~~~~~--~~D~i~~~~p~~~~ 126 (161)
++|+.+++... .+|.|++|+||+..
T Consensus 97 ~~D~l~~~~~~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 97 FQDALLYPWEEVPQGSLLVANLPYHIA 123 (271)
T ss_dssp ESCGGGSCGGGSCTTEEEEEEECSSCC
T ss_pred ECChhhCChhhccCccEEEecCccccc
Confidence 99999887653 68999999999863
No 142
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=6.3e-15 Score=102.62 Aligned_cols=103 Identities=13% Similarity=0.034 Sum_probs=82.4
Q ss_pred hcCCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC----CcccE
Q 031325 43 SFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----GHVDT 116 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----~~~D~ 116 (161)
.+...+|.+|||+|||+|.++..+|+. +..+|+|+|+++.+++.++++.+..+ ++..+.+|..+.... ..+|+
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~-ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR-NIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT-TEEEEESCTTCGGGGTTTCCCEEE
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc-CeeEEEEeccCccccccccceEEE
Confidence 345678999999999999999999986 35699999999999999998877654 788999988764321 28999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+++.++. .....++.++.+.||+++.++.
T Consensus 151 Vf~d~~~~----~~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 151 LYADVAQP----EQAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp EEECCCCT----THHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEeccCC----hhHHHHHHHHHHhccCCCEEEE
Confidence 99987754 3445789999999986555443
No 143
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=1.3e-14 Score=102.30 Aligned_cols=98 Identities=13% Similarity=0.124 Sum_probs=81.4
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC--C--CcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW--R--GHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~--~~~D~i~~ 119 (161)
++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++ +++++.+|+.+... . .+||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 5789999999999999999986 2 56999999999999999999998887 69999999977322 1 28999999
Q ss_pred CCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 120 NPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 120 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+.+ ......+++.+.+.++++++++.
T Consensus 143 d~~-----~~~~~~~l~~~~~~LkpGG~lv~ 168 (248)
T 3tfw_A 143 DAD-----KPNNPHYLRWALRYSRPGTLIIG 168 (248)
T ss_dssp CSC-----GGGHHHHHHHHHHTCCTTCEEEE
T ss_pred CCc-----hHHHHHHHHHHHHhcCCCeEEEE
Confidence 876 33445889999999986555554
No 144
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.62 E-value=1.4e-14 Score=100.89 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=82.5
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC-CCcc
Q 031325 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-RGHV 114 (161)
Q Consensus 36 ~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 114 (161)
+...+.......++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++....+ ++.+..+|+.+... ..+|
T Consensus 58 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 58 LGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCE
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccccCCCc
Confidence 33344444455678899999999999999999986 699999999999999999998777 89999999987332 3489
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+|+++.++++.. +.+.+.+++++.++.
T Consensus 136 D~v~~~~~~~~~~--------~~~~~~L~pgG~l~~ 163 (231)
T 1vbf_A 136 DRVVVWATAPTLL--------CKPYEQLKEGGIMIL 163 (231)
T ss_dssp EEEEESSBBSSCC--------HHHHHTEEEEEEEEE
T ss_pred cEEEECCcHHHHH--------HHHHHHcCCCcEEEE
Confidence 9999998887643 357778875544444
No 145
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.62 E-value=4.2e-15 Score=103.06 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=85.2
Q ss_pred CChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEc
Q 031325 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL--DIDFVQC 103 (161)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~ 103 (161)
..+.....+...+... ++.+|||+|||+|..+..+++. ...+|+++|+++.+++.|+++++..++ +++++++
T Consensus 42 ~~~~~~~~l~~l~~~~----~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 117 (221)
T 3u81_A 42 VGDAKGQIMDAVIREY----SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG 117 (221)
T ss_dssp CCHHHHHHHHHHHHHH----CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES
T ss_pred cCHHHHHHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC
Confidence 3444444444433333 6689999999999999999984 245999999999999999999999888 5999999
Q ss_pred ccccccC--C-----CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 104 DIRNLEW--R-----GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 104 d~~~~~~--~-----~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
|+.+... . .+||+|+++.+.++.. ...++++.+ +.+++++.++..
T Consensus 118 d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~--~~~~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 118 ASQDLIPQLKKKYDVDTLDMVFLDHWKDRYL--PDTLLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp CHHHHGGGTTTTSCCCCCSEEEECSCGGGHH--HHHHHHHHT-TCCCTTCEEEES
T ss_pred CHHHHHHHHHHhcCCCceEEEEEcCCcccch--HHHHHHHhc-cccCCCeEEEEe
Confidence 9866321 1 3799999988755431 222456665 888866666653
No 146
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.62 E-value=4.5e-15 Score=118.19 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=83.0
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccccC-C-CcccEEEECCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEW-R-GHVDTVVMNPP 122 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~-~-~~~D~i~~~~p 122 (161)
++.+|||+|||+|.+++.++..+..+|+++|+|+.+++.+++|++.+++ +++++++|+.+... . .+||+|++|||
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 6789999999999999999988777899999999999999999999887 49999999988432 2 38999999999
Q ss_pred CCCCCC---------CcchHHHHHHHhhcCCcEEEEe
Q 031325 123 FGTRKK---------GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 123 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+..... ..+.+++..+.+++++++++++
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~ 655 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 655 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 743221 2344668888899885555444
No 147
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.62 E-value=1.1e-14 Score=99.91 Aligned_cols=94 Identities=15% Similarity=0.127 Sum_probs=78.1
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~~ 126 (161)
++.+|||+|||+|.++..+ +..+++|+|+++.+++.++++. .++.++++|+.+++... +||+|+++..+++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhhhc
Confidence 7789999999999998887 4449999999999999999886 25789999998877654 89999999998876
Q ss_pred CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 127 KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. ....+++++.+.+++++.++.
T Consensus 109 ~--~~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 109 E--DVERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEE
T ss_pred C--CHHHHHHHHHHHcCCCCEEEE
Confidence 4 345899999999985544444
No 148
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=109.88 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=81.4
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcC-------------------------------
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLE------------------------------- 95 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~------------------------------- 95 (161)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 6789999999999999999986 45699999999999999998866432
Q ss_pred ----------------------------CceEEEEccccccc------CCCcccEEEECCCCCCC----CCCcchHHHHH
Q 031325 96 ----------------------------LDIDFVQCDIRNLE------WRGHVDTVVMNPPFGTR----KKGVDMDFLSM 137 (161)
Q Consensus 96 ----------------------------~~~~~~~~d~~~~~------~~~~~D~i~~~~p~~~~----~~~~~~~~~~~ 137 (161)
-++++.++|+.... ....||+|++...+.+. ......+++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 26899999997654 22389999998886543 33455689999
Q ss_pred HHhhcCCcEEEEe
Q 031325 138 ALKVASQAVYSLH 150 (161)
Q Consensus 138 ~~~~~~~~~~~~~ 150 (161)
+.++|+++++++.
T Consensus 206 ~~~~LkpGG~lil 218 (292)
T 3g07_A 206 IYRHLRPGGILVL 218 (292)
T ss_dssp HHHHEEEEEEEEE
T ss_pred HHHHhCCCcEEEE
Confidence 9999987666665
No 149
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.62 E-value=1.5e-15 Score=113.43 Aligned_cols=102 Identities=21% Similarity=0.198 Sum_probs=83.1
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC-----CCcccEEEECC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-----RGHVDTVVMNP 121 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-----~~~~D~i~~~~ 121 (161)
++.+|||+|||+|.+++.+++. ..+|+++|+++.+++.|+++++.+++ ++.++++|+.+... ..+||+|++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 6779999999999999999987 56999999999999999999999988 69999999988643 23899999999
Q ss_pred CCCCCCC-------CcchHHHHHHHhhcCCcEEEEe
Q 031325 122 PFGTRKK-------GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 122 p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+..... ....+++..+.+.+++++.++.
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 323 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILAT 323 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9755433 2234677888888875444333
No 150
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.62 E-value=9.2e-15 Score=102.27 Aligned_cols=98 Identities=17% Similarity=0.293 Sum_probs=82.0
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~~ 126 (161)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++... .++.++++|+.+++... +||+|++...+++.
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGEG--PDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTCB--TTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhccc--CCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 678999999999999999999865 999999999999999887522 26899999999887644 89999999998876
Q ss_pred CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 127 KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. .....++.+.+.++++++++.
T Consensus 130 ~--~~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 130 E--EPLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEE
T ss_pred c--CHHHHHHHHHHHhCCCeEEEE
Confidence 3 445899999999986555444
No 151
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.61 E-value=6e-15 Score=117.49 Aligned_cols=94 Identities=27% Similarity=0.309 Sum_probs=75.2
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcC------------------------------------------
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG------------------------------------------ 70 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~------------------------------------------ 70 (161)
.+.+...++...+..++..++|++||+|.++++++..+
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 33444444444444577899999999999999988642
Q ss_pred -CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC--C-cccEEEECCCCCCC
Q 031325 71 -ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR--G-HVDTVVMNPPFGTR 126 (161)
Q Consensus 71 -~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~--~-~~D~i~~~~p~~~~ 126 (161)
...++|+|+++.+++.|+.|+..+|+ .+.+.++|+.++... . .||+|++||||+..
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~R 316 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER 316 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC-
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcccc
Confidence 13799999999999999999999999 489999999987443 2 79999999999875
No 152
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.61 E-value=1.4e-14 Score=99.81 Aligned_cols=101 Identities=13% Similarity=0.017 Sum_probs=75.0
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc----cCCCcccEEEE
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL----EWRGHVDTVVM 119 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~D~i~~ 119 (161)
...++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.+.+..+... ++.++.+|+... +...+||+|++
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN-NIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS-SEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC-CeEEEEcCCCCchhhcccccceeEEEE
Confidence 3457789999999999999999886 34599999999998877766555432 688889998764 22348999999
Q ss_pred CCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 120 NPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 120 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+.+ .......++.++.+.|++++.++.
T Consensus 133 ~~~----~~~~~~~~l~~~~r~LkpgG~l~i 159 (210)
T 1nt2_A 133 DIA----QKNQIEILKANAEFFLKEKGEVVI 159 (210)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ecc----ChhHHHHHHHHHHHHhCCCCEEEE
Confidence 854 222222458999999986555544
No 153
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.61 E-value=7.4e-15 Score=105.62 Aligned_cols=95 Identities=17% Similarity=0.248 Sum_probs=77.9
Q ss_pred CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEc
Q 031325 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQC 103 (161)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~ 103 (161)
+..++.+...++.. ....++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+. +++++++
T Consensus 10 fl~d~~i~~~i~~~----~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 84 (285)
T 1zq9_A 10 ILKNPLIINSIIDK----AALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVG 84 (285)
T ss_dssp EECCHHHHHHHHHH----TCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEES
T ss_pred ccCCHHHHHHHHHh----cCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc
Confidence 33455665555544 3445788999999999999999999854 999999999999999999877665 7999999
Q ss_pred ccccccCCCcccEEEECCCCCCC
Q 031325 104 DIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 104 d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
|+.+.+.. .||+|++|+||++.
T Consensus 85 D~~~~~~~-~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 85 DVLKTDLP-FFDTCVANLPYQIS 106 (285)
T ss_dssp CTTTSCCC-CCSEEEEECCGGGH
T ss_pred ceecccch-hhcEEEEecCcccc
Confidence 99887554 79999999999864
No 154
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.61 E-value=6.1e-15 Score=108.36 Aligned_cols=91 Identities=29% Similarity=0.375 Sum_probs=79.0
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~~~ 125 (161)
++.+|||+|||+|.+++. ++ +..+|+++|+|+.+++.+++|++.+++ ++.++++|+.+.. ..||+|++|||+..
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~~ 270 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKFA 270 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTTG
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHhH
Confidence 678999999999999999 88 567999999999999999999999887 6999999999876 58999999999643
Q ss_pred CCCCcchHHHHHHHhhcCCcEEE
Q 031325 126 RKKGVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~ 148 (161)
.+++..+.+.+++++.+
T Consensus 271 ------~~~l~~~~~~L~~gG~l 287 (336)
T 2yx1_A 271 ------HKFIDKALDIVEEGGVI 287 (336)
T ss_dssp ------GGGHHHHHHHEEEEEEE
T ss_pred ------HHHHHHHHHHcCCCCEE
Confidence 27888889988744433
No 155
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.61 E-value=2.2e-15 Score=106.01 Aligned_cols=116 Identities=18% Similarity=0.150 Sum_probs=90.2
Q ss_pred CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEE
Q 031325 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFV 101 (161)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~ 101 (161)
+...+.....+...+... ++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++++..++ +++++
T Consensus 42 ~~i~~~~~~~l~~l~~~~----~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~ 117 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLT----RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLR 117 (242)
T ss_dssp TSCCHHHHHHHHHHHHHH----TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEE
T ss_pred CccCHHHHHHHHHHHhhc----CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 334445544444443333 5679999999999999999985 2 46999999999999999999999887 79999
Q ss_pred EcccccccC-------CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 102 QCDIRNLEW-------RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 102 ~~d~~~~~~-------~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+|+.+... ..+||+|+++.+ ......+++.+.+.++++++++.
T Consensus 118 ~gda~~~l~~~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 118 LGPALDTLHSLLNEGGEHQFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp ESCHHHHHHHHHHHHCSSCEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred EcCHHHHHHHHhhccCCCCEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEE
Confidence 999977533 248999999877 34455789999999986666655
No 156
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.61 E-value=7.1e-15 Score=106.86 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=83.2
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc-------CC-ceEEEEccccccc----C---CC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-------EL-DIDFVQCDIRNLE----W---RG 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~-------~~-~~~~~~~d~~~~~----~---~~ 112 (161)
++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++.... +. ++.++++|+.+.+ . ..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 56799999999999999999866669999999999999999988654 22 6899999998875 2 12
Q ss_pred cccEEEECCCCCCC--CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 113 HVDTVVMNPPFGTR--KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 113 ~~D~i~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+||+|+++..+++. .......++.++.+.++++++++.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 89999999988876 223445899999999986555554
No 157
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=2e-14 Score=99.01 Aligned_cols=105 Identities=13% Similarity=0.029 Sum_probs=81.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC-CCc
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-RGH 113 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-~~~ 113 (161)
..+.......++.+|||+|||+|.++..+++... .+++++|+++.+++.++++....+. ++.+..+|+..... ...
T Consensus 67 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 146 (215)
T 2yxe_A 67 GMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAP 146 (215)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCC
T ss_pred HHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCC
Confidence 3344444556788999999999999999998632 5999999999999999999988777 79999999865433 238
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
||+|+++.++++.. +.+.+.+++++.++.
T Consensus 147 fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~ 175 (215)
T 2yxe_A 147 YDRIYTTAAGPKIP--------EPLIRQLKDGGKLLM 175 (215)
T ss_dssp EEEEEESSBBSSCC--------HHHHHTEEEEEEEEE
T ss_pred eeEEEECCchHHHH--------HHHHHHcCCCcEEEE
Confidence 99999998887643 367788875444443
No 158
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.60 E-value=1e-14 Score=102.12 Aligned_cols=105 Identities=15% Similarity=0.205 Sum_probs=79.2
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhh------cCC-ceEEEEccccc-cc--CC-Cccc
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD------LEL-DIDFVQCDIRN-LE--WR-GHVD 115 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~------~~~-~~~~~~~d~~~-~~--~~-~~~D 115 (161)
++.+|||+|||+|.++..+++. +...++|+|+++.+++.|++++.. .+. ++.++++|+.+ ++ .. .+||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 5668999999999999999986 456999999999999999988754 345 89999999987 44 22 3899
Q ss_pred EEEECCCCCC------CCCCcchHHHHHHHhhcCCcEEEEecc
Q 031325 116 TVVMNPPFGT------RKKGVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 116 ~i~~~~p~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
.|+++.|-.+ ........+++.+.++|++++.++..+
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 9988654222 122234579999999998666665543
No 159
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.60 E-value=2.6e-14 Score=99.69 Aligned_cols=115 Identities=16% Similarity=0.143 Sum_probs=89.6
Q ss_pred CCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEc
Q 031325 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQC 103 (161)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~ 103 (161)
...+.....+...+... ++.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++...++ ++.+..+
T Consensus 37 ~~~~~~~~~l~~~~~~~----~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 112 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMA----APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG 112 (233)
T ss_dssp CCCHHHHHHHHHHHHHH----CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CcCHHHHHHHHHHHhcc----CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 34455555554444333 6789999999999999999986 346999999999999999999998887 5999999
Q ss_pred ccccc-cC---CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 104 DIRNL-EW---RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 104 d~~~~-~~---~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+.+. +. ...||+|+++++.. ....+++.+.+.+++++.++.
T Consensus 113 d~~~~~~~~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~ 158 (233)
T 2gpy_A 113 DALQLGEKLELYPLFDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILS 158 (233)
T ss_dssp CGGGSHHHHTTSCCEEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEE
T ss_pred CHHHHHHhcccCCCccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEE
Confidence 99874 22 23899999988743 455889999999986555554
No 160
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.60 E-value=8.7e-15 Score=104.68 Aligned_cols=105 Identities=14% Similarity=0.247 Sum_probs=82.1
Q ss_pred HHHhhcCCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhc-CC-ceEEEEcccccccCCCcc
Q 031325 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADL-EL-DIDFVQCDIRNLEWRGHV 114 (161)
Q Consensus 39 ~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~-~~-~~~~~~~d~~~~~~~~~~ 114 (161)
.+.......++.+|||+|||+|.++..+++. +..+++++|+++.+++.+++++... +. ++.+..+|+.+......|
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~f 180 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMY 180 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCE
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCc
Confidence 3344445567889999999999999999986 3469999999999999999999887 76 799999999884333489
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+|++++| . ...+++.+.+.+++++.++.
T Consensus 181 D~Vi~~~~----~---~~~~l~~~~~~LkpgG~l~i 209 (275)
T 1yb2_A 181 DAVIADIP----D---PWNHVQKIASMMKPGSVATF 209 (275)
T ss_dssp EEEEECCS----C---GGGSHHHHHHTEEEEEEEEE
T ss_pred cEEEEcCc----C---HHHHHHHHHHHcCCCCEEEE
Confidence 99999876 1 23789999999985554444
No 161
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.60 E-value=9.9e-15 Score=108.99 Aligned_cols=103 Identities=22% Similarity=0.278 Sum_probs=85.1
Q ss_pred CCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhc-----C----CceEEEEcccccc------
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADL-----E----LDIDFVQCDIRNL------ 108 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~-----~----~~~~~~~~d~~~~------ 108 (161)
..++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.+++++... | .++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 346789999999999999999886 3459999999999999999987654 3 3799999999886
Q ss_pred cCCC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 109 EWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 109 ~~~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+... +||+|+++.++++... ...+++++.++|+++++++.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEE
Confidence 4444 8999999999887643 45999999999996655554
No 162
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.59 E-value=4.5e-15 Score=105.02 Aligned_cols=94 Identities=16% Similarity=0.279 Sum_probs=76.5
Q ss_pred CCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcc
Q 031325 25 QYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCD 104 (161)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d 104 (161)
.|..++.+...+++.+ ...++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++... -+++++++|
T Consensus 10 nFL~d~~i~~~iv~~~----~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~-~~v~~i~~D 83 (255)
T 3tqs_A 10 HFLHDSFVLQKIVSAI----HPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQ-KNITIYQND 83 (255)
T ss_dssp CEECCHHHHHHHHHHH----CCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTC-TTEEEEESC
T ss_pred ccccCHHHHHHHHHhc----CCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhC-CCcEEEEcc
Confidence 3556667776666654 44478899999999999999999986 59999999999999999998752 279999999
Q ss_pred cccccCCC-----cccEEEECCCCCC
Q 031325 105 IRNLEWRG-----HVDTVVMNPPFGT 125 (161)
Q Consensus 105 ~~~~~~~~-----~~D~i~~~~p~~~ 125 (161)
+.+++... .|| |++|+||+.
T Consensus 84 ~~~~~~~~~~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 84 ALQFDFSSVKTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp TTTCCGGGSCCSSCEE-EEEECCHHH
T ss_pred hHhCCHHHhccCCCeE-EEecCCccc
Confidence 99876532 577 999999965
No 163
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.59 E-value=5e-15 Score=105.01 Aligned_cols=80 Identities=21% Similarity=0.236 Sum_probs=65.6
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCCh-------HHHHHHHHHHhhcCC-c-eEEEEcccccccC--C---C
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS-------DSLELASENAADLEL-D-IDFVQCDIRNLEW--R---G 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~-------~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~--~---~ 112 (161)
.++.+|||+|||+|.+++.+++.+. +|+++|+++ .+++.++++.+..++ + ++++++|+.++.. . .
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3567999999999999999999854 999999999 999999998877766 4 9999999987522 1 4
Q ss_pred cccEEEECCCCCCCC
Q 031325 113 HVDTVVMNPPFGTRK 127 (161)
Q Consensus 113 ~~D~i~~~~p~~~~~ 127 (161)
+||+|++||||.+..
T Consensus 161 ~fD~V~~dP~~~~~~ 175 (258)
T 2r6z_A 161 KPDIVYLDPMYPERR 175 (258)
T ss_dssp CCSEEEECCCC----
T ss_pred CccEEEECCCCCCcc
Confidence 799999999997753
No 164
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.59 E-value=3e-14 Score=100.45 Aligned_cols=98 Identities=16% Similarity=0.175 Sum_probs=81.0
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC--------CCccc
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW--------RGHVD 115 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--------~~~~D 115 (161)
++.+|||+|||+|+.+..+++. + ..+++++|+++.+++.++++++..++ +++++.+|+.+... ..+||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 5679999999999999999986 2 45999999999999999999998887 69999999976421 24899
Q ss_pred EEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 116 TVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 116 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|+++.+ ......+++.+.+.++++++++.
T Consensus 159 ~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~ 188 (247)
T 1sui_A 159 FIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGY 188 (247)
T ss_dssp EEEECSC-----STTHHHHHHHHHHHBCTTCCEEE
T ss_pred EEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEE
Confidence 9999876 23456899999999985555543
No 165
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.59 E-value=1.8e-14 Score=102.67 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=85.4
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CC-CeEEEEeCChH------HHHHHHHHHhhcCC--ceEEEE
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSD------SLELASENAADLEL--DIDFVQ 102 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~-~~v~~~D~~~~------~~~~a~~~~~~~~~--~~~~~~ 102 (161)
.......+.......++.+|||+|||+|.++..+++. +. .+++|+|+|+. +++.+++++...++ +++++.
T Consensus 28 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 28 QTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 3344445555556668889999999999999999987 32 59999999997 99999999988776 699999
Q ss_pred cc---cccccCC-CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEE
Q 031325 103 CD---IRNLEWR-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 103 ~d---~~~~~~~-~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
+| ...++.. .+||+|+++.++++..... .+++.+.++++++++++
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~ 156 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVD 156 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEE
T ss_pred CChhhhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEE
Confidence 98 3333333 3899999999988765443 46666666666333333
No 166
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.59 E-value=3.2e-14 Score=100.46 Aligned_cols=106 Identities=15% Similarity=0.142 Sum_probs=85.2
Q ss_pred HHHhhcCCCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhc-CC-ceEEEEcccccccCC-Cc
Q 031325 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADL-EL-DIDFVQCDIRNLEWR-GH 113 (161)
Q Consensus 39 ~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~-~~-~~~~~~~d~~~~~~~-~~ 113 (161)
.+.......++.+|||+|||+|.++..+++. + ..+++++|+++.+++.++++++.. +. ++.+..+|+.+.+.. ..
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~ 166 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAA 166 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTC
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCC
Confidence 3444445567889999999999999999987 4 469999999999999999999877 65 799999999887443 38
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
||+|++++|- ...+++.+.+.+++++.++..
T Consensus 167 ~D~v~~~~~~-------~~~~l~~~~~~L~~gG~l~~~ 197 (258)
T 2pwy_A 167 YDGVALDLME-------PWKVLEKAALALKPDRFLVAY 197 (258)
T ss_dssp EEEEEEESSC-------GGGGHHHHHHHEEEEEEEEEE
T ss_pred cCEEEECCcC-------HHHHHHHHHHhCCCCCEEEEE
Confidence 9999998761 237889999999865555543
No 167
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.59 E-value=8.2e-15 Score=102.66 Aligned_cols=96 Identities=19% Similarity=0.292 Sum_probs=79.8
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc--cCC-CcccEEEECCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL--EWR-GHVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~-~~~D~i~~~~p~ 123 (161)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ +.++.+|+.+. +.. .+||+|+++..+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l 111 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHFV 111 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESCG
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCch
Confidence 3568999999999999999998865 899999999999998776 57889998875 333 389999999999
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++........+++++.+.++++++++.
T Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 112 EHLDPERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp GGSCGGGHHHHHHHHHHHBCTTCCEEE
T ss_pred hhCCcHHHHHHHHHHHHHcCCCcEEEE
Confidence 888766667999999999985444444
No 168
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.59 E-value=3.9e-14 Score=99.45 Aligned_cols=103 Identities=18% Similarity=0.237 Sum_probs=83.2
Q ss_pred HHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccccc-CCCcccE
Q 031325 40 AENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE-WRGHVDT 116 (161)
Q Consensus 40 ~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~-~~~~~D~ 116 (161)
+.......++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++....++ ++.+..+|+.+.. ....||+
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 161 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHA 161 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSE
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccE
Confidence 333344557889999999999999999988 56999999999999999999988776 7899999998865 3348999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|++++| .....++.+.+.+++++.++.
T Consensus 162 v~~~~~-------~~~~~l~~~~~~L~~gG~l~~ 188 (248)
T 2yvl_A 162 AFVDVR-------EPWHYLEKVHKSLMEGAPVGF 188 (248)
T ss_dssp EEECSS-------CGGGGHHHHHHHBCTTCEEEE
T ss_pred EEECCc-------CHHHHHHHHHHHcCCCCEEEE
Confidence 999877 223788899999985444444
No 169
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=2e-14 Score=100.83 Aligned_cols=98 Identities=17% Similarity=0.147 Sum_probs=83.3
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC------cccEEEEC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG------HVDTVVMN 120 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~------~~D~i~~~ 120 (161)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++... .++.++++|+.+++... .||+|+++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA--ANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC--TTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc--cCceEEECcccccccccccccccCccEEEEc
Confidence 4677999999999999999999866 999999999999999988732 26999999998865432 38999999
Q ss_pred CCCCCCCCCcchHHHHHHHhhcCCcEE
Q 031325 121 PPFGTRKKGVDMDFLSMALKVASQAVY 147 (161)
Q Consensus 121 ~p~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (161)
..+++........+++.+.+.++++++
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~ 158 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGA 158 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCE
Confidence 999998777778999999999985444
No 170
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.58 E-value=9.5e-15 Score=105.41 Aligned_cols=105 Identities=12% Similarity=0.099 Sum_probs=78.4
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc------CCceEEEEcccccccCC--CcccEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL------ELDIDFVQCDIRNLEWR--GHVDTVV 118 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~--~~~D~i~ 118 (161)
++.+|||+|||+|..+.++++. +..+|+++|+|+.+++.|++++... .-+++++.+|+.+.... .+||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 5679999999999999999987 4669999999999999999988654 12789999999876432 3899999
Q ss_pred ECCCCCCCCC--CcchHHHHHHHhhcCCcEEEEecc
Q 031325 119 MNPPFGTRKK--GVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 119 ~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
+|++-..... -...++++.+.+.|++++.++.+.
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9877433221 122589999999998666666543
No 171
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.58 E-value=9.5e-15 Score=113.23 Aligned_cols=102 Identities=21% Similarity=0.157 Sum_probs=81.6
Q ss_pred CcccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc--------C--------CCeEEEEeCChH
Q 031325 19 PKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--------G--------ADQVIAIDIDSD 82 (161)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~--------~--------~~~v~~~D~~~~ 82 (161)
.+...++|.||+.++..|++.+.. .++ +|+|+|||+|.+++.+++. . ...++|+|+++.
T Consensus 220 ~~k~~G~fyTP~~Vv~lmv~ll~p----~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~ 294 (544)
T 3khk_A 220 EGKQGGQYYTPKSIVTLIVEMLEP----YKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPT 294 (544)
T ss_dssp TTCCSTTTCCCHHHHHHHHHHHCC----CSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHH
T ss_pred hCccCCeEeCCHHHHHHHHHHHhc----CCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHH
Confidence 345678999999999999887643 233 9999999999999887642 0 348999999999
Q ss_pred HHHHHHHHHhhcCCc--eEEEEcccccccCC--CcccEEEECCCCCC
Q 031325 83 SLELASENAADLELD--IDFVQCDIRNLEWR--GHVDTVVMNPPFGT 125 (161)
Q Consensus 83 ~~~~a~~~~~~~~~~--~~~~~~d~~~~~~~--~~~D~i~~~~p~~~ 125 (161)
++.+|+.++..+++. +.+.++|....+.. ..||+|++||||+.
T Consensus 295 ~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 295 TWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp HHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSC
T ss_pred HHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCC
Confidence 999999999888873 33488888765543 28999999999985
No 172
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.58 E-value=3.1e-14 Score=100.24 Aligned_cols=107 Identities=17% Similarity=0.260 Sum_probs=81.1
Q ss_pred CCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhc--------CC-ceEEEEccccc-cc--CC-Cc
Q 031325 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADL--------EL-DIDFVQCDIRN-LE--WR-GH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~--------~~-~~~~~~~d~~~-~~--~~-~~ 113 (161)
++.+|||+|||+|.++..+++.+ ...++|+|+++.+++.+++++... ++ ++.++.+|+.+ ++ .. ..
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 56799999999999999999874 348999999999999999988765 66 89999999987 33 22 27
Q ss_pred ccEEEECCCCCC------CCCCcchHHHHHHHhhcCCcEEEEeccCc
Q 031325 114 VDTVVMNPPFGT------RKKGVDMDFLSMALKVASQAVYSLHKTST 154 (161)
Q Consensus 114 ~D~i~~~~p~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (161)
+|.|+.+.|-.+ ........++..+.+++++++.++..+..
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 888876533211 12223358999999999966666654433
No 173
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.58 E-value=3.9e-14 Score=98.42 Aligned_cols=98 Identities=18% Similarity=0.134 Sum_probs=80.8
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC----C---CcccE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW----R---GHVDT 116 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~----~---~~~D~ 116 (161)
++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++++..++ +++++.+|+.+... . .+||+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 5689999999999999999985 2 46999999999999999999998877 79999999876421 1 47999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+++++ ......+++.+.+.+++++.++.
T Consensus 149 v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 149 AVVDAD-----KENCSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp EEECSC-----STTHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECCC-----HHHHHHHHHHHHHHcCCCeEEEE
Confidence 999987 34455889999999986555554
No 174
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.58 E-value=3.1e-14 Score=101.87 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=84.9
Q ss_pred HHhhcCCCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCccc
Q 031325 40 AENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVD 115 (161)
Q Consensus 40 ~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D 115 (161)
+.......++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++...++ ++.+..+|+.+......||
T Consensus 104 i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 183 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVD 183 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEE
T ss_pred HHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccC
Confidence 344445567889999999999999999987 4 46999999999999999999988886 7999999998863334899
Q ss_pred EEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 116 TVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 116 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+|++++|.. ..+++.+.+.+++++.++..
T Consensus 184 ~V~~~~~~~-------~~~l~~~~~~L~pgG~l~~~ 212 (277)
T 1o54_A 184 ALFLDVPDP-------WNYIDKCWEALKGGGRFATV 212 (277)
T ss_dssp EEEECCSCG-------GGTHHHHHHHEEEEEEEEEE
T ss_pred EEEECCcCH-------HHHHHHHHHHcCCCCEEEEE
Confidence 999988732 27888899999865555543
No 175
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=2.1e-14 Score=97.01 Aligned_cols=98 Identities=17% Similarity=0.235 Sum_probs=80.2
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECC-CCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNP-PFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~-p~~~ 125 (161)
++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++.. ++.+..+|+.+.+... +||+|++++ .+++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP----EARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT----TSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC----CCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 678999999999999999999854 99999999999999998764 4789999998876543 899999995 4555
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
........+++.+.+.+++++.++.
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~ 145 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVI 145 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEE
Confidence 5445556899999999985544444
No 176
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.58 E-value=8.7e-15 Score=101.61 Aligned_cols=99 Identities=16% Similarity=0.120 Sum_probs=77.8
Q ss_pred CCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCC-cccEEEECCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~-~~D~i~~~~p~ 123 (161)
++.+|+|+|||+|.+++.+++.+ ..+|+++|+++.+++.|++|++.+++ +++++++|..+..... .||+|+....
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm- 99 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM- 99 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE-
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC-
Confidence 56899999999999999999975 55899999999999999999999998 6999999999876554 6999875222
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
....-.+.++.....+++..+++.
T Consensus 100 ---Gg~lI~~IL~~~~~~l~~~~~lIl 123 (230)
T 3lec_A 100 ---GGRLIADILNNDIDKLQHVKTLVL 123 (230)
T ss_dssp ---CHHHHHHHHHHTGGGGTTCCEEEE
T ss_pred ---chHHHHHHHHHHHHHhCcCCEEEE
Confidence 223344667777777764444443
No 177
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.58 E-value=1.4e-14 Score=109.99 Aligned_cols=108 Identities=19% Similarity=0.215 Sum_probs=85.2
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC--CCcccEEEE
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW--RGHVDTVVM 119 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--~~~~D~i~~ 119 (161)
...++.+|||+|||+|+.+..+++. +...|+++|+++.+++.+++|+++.|+ ++.++++|..++.. ...||+|++
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEE
Confidence 3457889999999999999999875 346999999999999999999999998 79999999988652 348999999
Q ss_pred CCCCCCCC---C-----------------CcchHHHHHHHhhcCC---cEEEEecc
Q 031325 120 NPPFGTRK---K-----------------GVDMDFLSMALKVASQ---AVYSLHKT 152 (161)
Q Consensus 120 ~~p~~~~~---~-----------------~~~~~~~~~~~~~~~~---~~~~~~~~ 152 (161)
|||+.-.. . ..+.++++.+.+.+++ .+|+.|..
T Consensus 182 DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 182 DAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp ECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 99974321 1 1122678888889875 44445543
No 178
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.58 E-value=3.1e-14 Score=101.81 Aligned_cols=107 Identities=19% Similarity=0.158 Sum_probs=85.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhc-C--C-ceEEEEcccccccCC
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADL-E--L-DIDFVQCDIRNLEWR 111 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~-~--~-~~~~~~~d~~~~~~~ 111 (161)
..+.......++.+|||+|||+|.++..+++. +..+++++|+++.+++.+++++... + . ++.+..+|+.+.+..
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~ 168 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP 168 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC
Confidence 34444445567889999999999999999985 3569999999999999999999877 5 3 799999999887553
Q ss_pred C-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 112 G-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 112 ~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
. .||+|++++| ....+++.+.+.++++++++..
T Consensus 169 ~~~~D~v~~~~~-------~~~~~l~~~~~~L~pgG~l~~~ 202 (280)
T 1i9g_A 169 DGSVDRAVLDML-------APWEVLDAVSRLLVAGGVLMVY 202 (280)
T ss_dssp TTCEEEEEEESS-------CGGGGHHHHHHHEEEEEEEEEE
T ss_pred CCceeEEEECCc-------CHHHHHHHHHHhCCCCCEEEEE
Confidence 3 8999999876 1227899999999865555553
No 179
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.58 E-value=5e-15 Score=99.47 Aligned_cols=102 Identities=19% Similarity=0.144 Sum_probs=79.8
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
++.+|||+|||+|.+++.++.. +..+++++|+|+.|++.+++++...|...++...|........+||+|++.-.+|+.
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k~LHlL 128 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPVL 128 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEETCHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhhHHHhh
Confidence 4779999999999999999775 344999999999999999999999887444555777665555589999999999888
Q ss_pred CCCcchHHHHHHHhhcC-CcEEEEec
Q 031325 127 KKGVDMDFLSMALKVAS-QAVYSLHK 151 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~-~~~~~~~~ 151 (161)
.. ....+..+.+.++ +++++++.
T Consensus 129 -~~-~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 129 -KQ-QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp -HH-TTCCHHHHHHTCEEEEEEEEEE
T ss_pred -hh-hHHHHHHHHHHhCCCCEEEEeC
Confidence 22 2345557888887 55555554
No 180
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.57 E-value=9.6e-15 Score=102.19 Aligned_cols=99 Identities=17% Similarity=0.106 Sum_probs=77.8
Q ss_pred CCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCC-cccEEEECCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~-~~D~i~~~~p~ 123 (161)
++.+|+|+|||+|.+++.+++.+ ..+|+++|+++.+++.|++|++.+++ ++++.++|..+..... .||+|+....
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm- 99 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM- 99 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE-
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC-
Confidence 56899999999999999999975 45899999999999999999999998 5999999998876544 5999875221
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
....-.+.++...+.+++..+++.
T Consensus 100 ---Gg~lI~~IL~~~~~~L~~~~~lIl 123 (244)
T 3gnl_A 100 ---GGTLIRTILEEGAAKLAGVTKLIL 123 (244)
T ss_dssp ---CHHHHHHHHHHTGGGGTTCCEEEE
T ss_pred ---chHHHHHHHHHHHHHhCCCCEEEE
Confidence 223344667777777764444444
No 181
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.57 E-value=1.1e-14 Score=101.01 Aligned_cols=99 Identities=13% Similarity=0.056 Sum_probs=77.5
Q ss_pred CCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCC-cccEEEECCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~-~~D~i~~~~p~ 123 (161)
++.+|+|+|||+|.+++.+++.+ ..+|+++|+++.+++.|++|++.+++ +++++.+|..+..... .||+|+....
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~- 93 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM- 93 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE-
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC-
Confidence 56799999999999999999975 55899999999999999999999998 5999999997644333 6998875322
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
....-.+.++.....+++..+++.
T Consensus 94 ---Gg~~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 94 ---GGRLIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp ---CHHHHHHHHHHTGGGCTTCCEEEE
T ss_pred ---ChHHHHHHHHHHHHHhCCCCEEEE
Confidence 222234778887877775444444
No 182
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.57 E-value=5.9e-14 Score=98.35 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=81.7
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC--------CCccc
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW--------RGHVD 115 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--------~~~~D 115 (161)
++.+|||+|||+|+.+..+++. + ..+++++|+++.+++.++++++..++ +++++.+|+.+... ..+||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 5679999999999999999986 3 46999999999999999999999888 69999999977422 23899
Q ss_pred EEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 116 TVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 116 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|+++.+ ......+++.+.+.++++++++.
T Consensus 150 ~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~ 179 (237)
T 3c3y_A 150 FGFVDAD-----KPNYIKYHERLMKLVKVGGIVAY 179 (237)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCc-----hHHHHHHHHHHHHhcCCCeEEEE
Confidence 9999865 34556899999999986655555
No 183
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.57 E-value=2.7e-14 Score=108.57 Aligned_cols=108 Identities=18% Similarity=0.193 Sum_probs=85.0
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC--CCcccEEEEC
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--RGHVDTVVMN 120 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~i~~~ 120 (161)
...++.+|||+|||+|+.+..+++. +...|+++|+++.+++.+++++++.|+.+.++++|+.++.. ...||+|++|
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEEC
Confidence 4457889999999999999999976 33599999999999999999999998888899999988653 3489999999
Q ss_pred CCCCCCC-----CC---------------cchHHHHHHHhhcCC---cEEEEecc
Q 031325 121 PPFGTRK-----KG---------------VDMDFLSMALKVASQ---AVYSLHKT 152 (161)
Q Consensus 121 ~p~~~~~-----~~---------------~~~~~~~~~~~~~~~---~~~~~~~~ 152 (161)
||+.-.. .. .+.++++.+.+.+++ .+|..|..
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 9984221 11 125678888989885 34444543
No 184
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.57 E-value=4.8e-14 Score=97.42 Aligned_cols=95 Identities=18% Similarity=0.119 Sum_probs=77.8
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc---cCCC--cccEEEECC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL---EWRG--HVDTVVMNP 121 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~---~~~~--~~D~i~~~~ 121 (161)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ .++.+..+|+.++ +... +||+|+++.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECc
Confidence 3668999999999999999999855 999999999999999887 2467888888776 2222 699999998
Q ss_pred CCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 122 PFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 122 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+++ ......+++.+.+.++++++++.
T Consensus 125 ~l~---~~~~~~~l~~~~~~L~pgG~l~~ 150 (227)
T 3e8s_A 125 ALL---HQDIIELLSAMRTLLVPGGALVI 150 (227)
T ss_dssp CCC---SSCCHHHHHHHHHTEEEEEEEEE
T ss_pred hhh---hhhHHHHHHHHHHHhCCCeEEEE
Confidence 888 34555999999999986655555
No 185
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.57 E-value=6.8e-14 Score=97.17 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=78.8
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc----CCCcccEEE
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE----WRGHVDTVV 118 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~----~~~~~D~i~ 118 (161)
...++.+|||+|||+|.++..+++. + ..+++|+|+++.+++.++++++.. .++.++++|+.+.. ...+||+|+
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEE
Confidence 3457789999999999999999976 3 369999999999999999988765 37999999998742 123799999
Q ss_pred ECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 119 MNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 119 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+++| .......++..+.+.+++++.++.
T Consensus 149 ~~~~----~~~~~~~~l~~~~~~LkpgG~l~~ 176 (227)
T 1g8a_A 149 EDVA----QPTQAKILIDNAEVYLKRGGYGMI 176 (227)
T ss_dssp ECCC----STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ECCC----CHhHHHHHHHHHHHhcCCCCEEEE
Confidence 9988 222233458999999985554444
No 186
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.57 E-value=3.9e-14 Score=99.01 Aligned_cols=104 Identities=11% Similarity=0.010 Sum_probs=79.0
Q ss_pred HHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCC-cccE
Q 031325 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDT 116 (161)
Q Consensus 39 ~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~-~~D~ 116 (161)
.+.......++.+|||+|||+|.++..+++....+++++|+++.+++.+++++...++ ++.+..+|........ .||+
T Consensus 82 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 161 (235)
T 1jg1_A 82 IMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDV 161 (235)
T ss_dssp HHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEE
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccE
Confidence 3333334557889999999999999999987326999999999999999999998887 7999999983322222 5999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+++.++.+.. +.+.+.+++++.++.
T Consensus 162 Ii~~~~~~~~~--------~~~~~~L~pgG~lvi 187 (235)
T 1jg1_A 162 IIVTAGAPKIP--------EPLIEQLKIGGKLII 187 (235)
T ss_dssp EEECSBBSSCC--------HHHHHTEEEEEEEEE
T ss_pred EEECCcHHHHH--------HHHHHhcCCCcEEEE
Confidence 99988876432 356778875444444
No 187
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.57 E-value=6.2e-15 Score=104.80 Aligned_cols=107 Identities=11% Similarity=0.029 Sum_probs=81.3
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC----------------------------
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---------------------------- 96 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---------------------------- 96 (161)
+..++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|+++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4457789999999999888887777766899999999999999987654310
Q ss_pred --ceE-EEEcccccccC-----CCcccEEEECCCCCCCC--CCcchHHHHHHHhhcCCcEEEEec
Q 031325 97 --DID-FVQCDIRNLEW-----RGHVDTVVMNPPFGTRK--KGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 97 --~~~-~~~~d~~~~~~-----~~~~D~i~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
++. ++++|+.+..+ ..+||+|+++..+++.. .......+.++.++|+++++++..
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 233 88999988422 23899999988877632 234458899999999976666553
No 188
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.57 E-value=5.3e-14 Score=98.18 Aligned_cols=101 Identities=15% Similarity=-0.003 Sum_probs=77.3
Q ss_pred cCCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc---C-CCcccEE
Q 031325 44 FGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE---W-RGHVDTV 117 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~-~~~~D~i 117 (161)
....++.+|||+|||+|.++..+++. +..+++|+|+++.+++.+.++.+.. .++.++.+|+.+.. . ..+||+|
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEE
Confidence 34456789999999999999999986 3469999999999888887777654 37899999998742 2 2389999
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEEE
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
++++| .......++.++.+.+++++.++
T Consensus 152 ~~~~~----~~~~~~~~~~~~~~~LkpgG~l~ 179 (233)
T 2ipx_A 152 FADVA----QPDQTRIVALNAHTFLRNGGHFV 179 (233)
T ss_dssp EECCC----CTTHHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCC----CccHHHHHHHHHHHHcCCCeEEE
Confidence 99988 23333456888999998544333
No 189
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.56 E-value=2.4e-14 Score=109.46 Aligned_cols=102 Identities=11% Similarity=0.212 Sum_probs=82.2
Q ss_pred CCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC--CCcccEEEECCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW--RGHVDTVVMNPP 122 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--~~~~D~i~~~~p 122 (161)
++.+|||+|||+|+.+..+++. +...|+++|+++.+++.+++++++.|+ ++.++++|+.++.. ...||+|++|||
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 7789999999999999999986 246999999999999999999999998 89999999988653 338999999999
Q ss_pred CCCC---CC--C---------------cchHHHHHHHhhcCCcEEEE
Q 031325 123 FGTR---KK--G---------------VDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 123 ~~~~---~~--~---------------~~~~~~~~~~~~~~~~~~~~ 149 (161)
+.-. .. . .+.+.++.+.+.+++++.++
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lv 243 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLV 243 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 8532 11 0 12467888889998543333
No 190
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.56 E-value=3.7e-14 Score=101.49 Aligned_cols=105 Identities=13% Similarity=0.072 Sum_probs=82.4
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc--C---CceEEEEcccccccC--CCcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL--E---LDIDFVQCDIRNLEW--RGHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~--~---~~~~~~~~d~~~~~~--~~~~D~i~~ 119 (161)
.+.+|||+|||+|..+.+++++ +..+++++|+++.+++.+++++... + -+++++.+|+.+... ..+||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 5689999999999999999987 5679999999999999999987542 2 279999999987432 238999999
Q ss_pred CCCCCCCCCC--cchHHHHHHHhhcCCcEEEEecc
Q 031325 120 NPPFGTRKKG--VDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 120 ~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
|++....... ...++++.+.+.|++++.++.+.
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9986442211 13589999999998666655543
No 191
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.56 E-value=6.1e-14 Score=102.68 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=89.5
Q ss_pred HHHhhcCC--CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCc
Q 031325 39 TAENSFGD--VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGH 113 (161)
Q Consensus 39 ~~~~~~~~--~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~ 113 (161)
.+...+.. .++.+|||+|||+|..+..+++. +..+++++|++ .+++.+++++...++ +++++.+|+.+.+....
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 232 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND 232 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC
Confidence 33434444 56789999999999999999886 34599999999 999999999988877 59999999987654446
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
||+|++..++++.......+.++++.+.++++++++.
T Consensus 233 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 269 (335)
T 2r3s_A 233 YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIV 269 (335)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 9999998888876656667999999999986554443
No 192
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.55 E-value=6.8e-14 Score=97.60 Aligned_cols=100 Identities=17% Similarity=0.134 Sum_probs=81.0
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEE-CCCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVM-NPPFGT 125 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~-~~p~~~ 125 (161)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++.. ++.+..+|+.+++...+||+|++ ...+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP----DATLHQGDMRDFRLGRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT----TCEEEECCTTTCCCSSCEEEEEECTTGGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC----CCEEEECCHHHcccCCCCcEEEEcCchHhh
Confidence 4678999999999999999998755 99999999999999988753 48899999988776448999996 446666
Q ss_pred CCC-CcchHHHHHHHhhcCCcEEEEec
Q 031325 126 RKK-GVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 126 ~~~-~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
... .....+++.+.+.+++++.++..
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 533 44568899999999866666553
No 193
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.55 E-value=5.2e-14 Score=108.90 Aligned_cols=124 Identities=19% Similarity=0.203 Sum_probs=93.5
Q ss_pred ccCCcccccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc----C----------CCeEEEEeCCh
Q 031325 16 FSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----G----------ADQVIAIDIDS 81 (161)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~----~----------~~~v~~~D~~~ 81 (161)
|.......++|.||+++++.|++.+. +.++.+|+|++||+|++.+.+.++ . ...++|+|+++
T Consensus 189 ~~~~~g~~GqfyTP~~Vv~lmv~l~~----p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~ 264 (530)
T 3ufb_A 189 MRDAAGDSGEFYTPRPVVRFMVEVMD----PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKS 264 (530)
T ss_dssp HTTSSSSCCCCCCCHHHHHHHHHHHC----CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSH
T ss_pred HHHhcCcCceECCcHHHHHHHHHhhc----cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccH
Confidence 43333467899999999998887664 347789999999999999887653 1 13799999999
Q ss_pred HHHHHHHHHHhhcCC-ceEEEEcccccccCC-----CcccEEEECCCCCCC--------------CCCcchHHHHHHHhh
Q 031325 82 DSLELASENAADLEL-DIDFVQCDIRNLEWR-----GHVDTVVMNPPFGTR--------------KKGVDMDFLSMALKV 141 (161)
Q Consensus 82 ~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-----~~~D~i~~~~p~~~~--------------~~~~~~~~~~~~~~~ 141 (161)
.++.+|+.|+.-+|. ...+..+|....+.. ..||+|++||||+.. .......|+..+.+.
T Consensus 265 ~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~ 344 (530)
T 3ufb_A 265 LPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRK 344 (530)
T ss_dssp HHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHH
Confidence 999999999888887 567888888764332 179999999999742 112233567777777
Q ss_pred cC
Q 031325 142 AS 143 (161)
Q Consensus 142 ~~ 143 (161)
|+
T Consensus 345 Lk 346 (530)
T 3ufb_A 345 LK 346 (530)
T ss_dssp BC
T ss_pred hh
Confidence 74
No 194
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.55 E-value=9.7e-14 Score=100.73 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=70.2
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC----CcccEE
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----GHVDTV 117 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~----~~~D~i 117 (161)
...++.+|||+|||+|+.+..+++. +...|+++|+++.+++.+++++++.++ ++.++++|+.++... ..||.|
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEE
Confidence 3457889999999999999999885 346999999999999999999999998 899999999886543 379999
Q ss_pred EECCCCC
Q 031325 118 VMNPPFG 124 (161)
Q Consensus 118 ~~~~p~~ 124 (161)
++|||+.
T Consensus 179 l~D~PcS 185 (309)
T 2b9e_A 179 LLDPSCS 185 (309)
T ss_dssp EECCCCC
T ss_pred EEcCCcC
Confidence 9999984
No 195
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.55 E-value=1.4e-13 Score=103.75 Aligned_cols=112 Identities=15% Similarity=0.103 Sum_probs=83.3
Q ss_pred HHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHH-------HHHHhhcC--C-ceEEEEccc
Q 031325 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELA-------SENAADLE--L-DIDFVQCDI 105 (161)
Q Consensus 37 ~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a-------~~~~~~~~--~-~~~~~~~d~ 105 (161)
+..+.......++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.| ++++...| . ++.++++|.
T Consensus 231 v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 231 LSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 333444445567889999999999999999985 656899999999999998 88888877 4 789998865
Q ss_pred ccc--c---CCCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 106 RNL--E---WRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 106 ~~~--~---~~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
... + ....||+|+++.+... ......+.++.+.+++++.++..
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l~~---~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFLFD---EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTTCC---HHHHHHHHHHHTTCCTTCEEEES
T ss_pred cccccccccccCCCCEEEEeCcccc---ccHHHHHHHHHHhCCCCeEEEEe
Confidence 432 1 1237999999765421 33446788999999865555553
No 196
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.55 E-value=1.5e-13 Score=94.47 Aligned_cols=97 Identities=20% Similarity=0.172 Sum_probs=80.2
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC--CCcccEEEECC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW--RGHVDTVVMNP 121 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~~D~i~~~~ 121 (161)
++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++++..++ +++++.+|+.+... .. ||+|+++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 5679999999999999999986 2 46999999999999999999988877 59999999977422 34 99999986
Q ss_pred CCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 122 PFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 122 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+ ......+++.+.+.++++++++.
T Consensus 135 ~-----~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 135 D-----VFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp T-----TSCHHHHHHHHGGGEEEEEEEEE
T ss_pred C-----hhhhHHHHHHHHHhcCCCeEEEE
Confidence 5 24456899999999986666555
No 197
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.55 E-value=1.7e-13 Score=95.93 Aligned_cols=115 Identities=11% Similarity=0.089 Sum_probs=87.3
Q ss_pred CCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEE
Q 031325 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQ 102 (161)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~ 102 (161)
...+.....+...+... ++.+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++...++ ++.+..
T Consensus 43 ~~~~~~~~~l~~l~~~~----~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~ 118 (239)
T 2hnk_A 43 QISPEEGQFLNILTKIS----GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL 118 (239)
T ss_dssp SCCHHHHHHHHHHHHHH----TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred ccCHHHHHHHHHHHHhh----CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE
Confidence 34445555444444333 6789999999999999999986 2 46999999999999999999998887 499999
Q ss_pred cccccccC-----------------C-CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 103 CDIRNLEW-----------------R-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 103 ~d~~~~~~-----------------~-~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|+.+... . .+||+|+++.. ......+++.+.+.+++++.++.
T Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~ 179 (239)
T 2hnk_A 119 GSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKPGGLLIA 179 (239)
T ss_dssp SCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCCCeEEEE
Confidence 99876321 1 47999999854 23345889999999986555555
No 198
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.54 E-value=8.9e-15 Score=101.82 Aligned_cols=103 Identities=19% Similarity=0.220 Sum_probs=79.6
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCC-hHHHHHH---HHHHhhcCC-ceEEEEcccccccCC--CcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDID-SDSLELA---SENAADLEL-DIDFVQCDIRNLEWR--GHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~-~~~~~~a---~~~~~~~~~-~~~~~~~d~~~~~~~--~~~D~i~~ 119 (161)
++.+|||+|||+|.++..+++. +...|+|+|+| +.+++.| +++....++ ++.++++|+.+++.. +.+|.+.+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 6789999999999999999964 45589999999 6666666 777777777 799999999988542 36778888
Q ss_pred CCCCCCC---CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 120 NPPFGTR---KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 120 ~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++|+... .......++.++.++|++++.++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 8886542 112234789999999996666555
No 199
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.54 E-value=8e-14 Score=98.76 Aligned_cols=96 Identities=18% Similarity=0.196 Sum_probs=77.9
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~~ 126 (161)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++... .+..+|+.+++... +||+|++..++.+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~-----~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK-----NVVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS-----CEEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC-----CEEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 678999999999999999998855 999999999999999987651 38899998877644 89999997665443
Q ss_pred CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 127 KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
... ...+++++.+.+++++.++.
T Consensus 128 ~~~-~~~~l~~~~~~LkpgG~l~~ 150 (260)
T 2avn_A 128 VEN-KDKAFSEIRRVLVPDGLLIA 150 (260)
T ss_dssp CSC-HHHHHHHHHHHEEEEEEEEE
T ss_pred ccc-HHHHHHHHHHHcCCCeEEEE
Confidence 222 56899999999986555554
No 200
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.54 E-value=3.5e-14 Score=101.93 Aligned_cols=103 Identities=14% Similarity=0.136 Sum_probs=79.6
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc------------CCceEEEEccccccc-CCCcc
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL------------ELDIDFVQCDIRNLE-WRGHV 114 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~------------~~~~~~~~~d~~~~~-~~~~~ 114 (161)
.+.+|||+|||+|..+..+++.+..+++++|+|+.+++.|++++ .. .-+++++.+|+.+.. ...+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 56899999999999999999886669999999999999999988 32 227899999987642 23389
Q ss_pred cEEEECCCCCCCCCC-c-chHHHHHHHhhcCCcEEEEec
Q 031325 115 DTVVMNPPFGTRKKG-V-DMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 115 D~i~~~~p~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 151 (161)
|+|++++|....... . ..++++.+.+.|++++.++.+
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 999999986432211 1 468999999999855555543
No 201
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.54 E-value=4.8e-14 Score=106.73 Aligned_cols=105 Identities=16% Similarity=0.198 Sum_probs=84.1
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc--CC-CcccEEEEC
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE--WR-GHVDTVVMN 120 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~~-~~~D~i~~~ 120 (161)
...++.+|||+|||+|..+..+++.. ..+++++|+++.+++.++++++..++++.++++|+.+.+ .. ..||+|++|
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEe
Confidence 44578899999999999999999863 369999999999999999999998888899999998865 22 379999999
Q ss_pred CCCCCCC---CC-----------------cchHHHHHHHhhcCCcEEEE
Q 031325 121 PPFGTRK---KG-----------------VDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 121 ~p~~~~~---~~-----------------~~~~~~~~~~~~~~~~~~~~ 149 (161)
||+.... .. .+..+++.+.+.+++++.++
T Consensus 323 ~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lv 371 (429)
T 1sqg_A 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLV 371 (429)
T ss_dssp CCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred CCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 9985421 11 11477888999988544444
No 202
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.54 E-value=6.6e-14 Score=98.52 Aligned_cols=93 Identities=16% Similarity=0.258 Sum_probs=73.7
Q ss_pred CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccc
Q 031325 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (161)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~ 105 (161)
+..++.+...+ .......++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.++++....+ +++++++|+
T Consensus 12 fl~d~~~~~~i----~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~D~ 85 (244)
T 1qam_A 12 FITSKHNIDKI----MTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHD-NFQVLNKDI 85 (244)
T ss_dssp BCCCHHHHHHH----HTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCC-SEEEECCCG
T ss_pred ccCCHHHHHHH----HHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCC-CeEEEEChH
Confidence 44444554444 444455578899999999999999999986 599999999999999999886432 799999999
Q ss_pred ccccCCC--cccEEEECCCCCC
Q 031325 106 RNLEWRG--HVDTVVMNPPFGT 125 (161)
Q Consensus 106 ~~~~~~~--~~D~i~~~~p~~~ 125 (161)
.+++... .| .|++|+||+.
T Consensus 86 ~~~~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 86 LQFKFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp GGCCCCSSCCC-EEEEECCGGG
T ss_pred HhCCcccCCCe-EEEEeCCccc
Confidence 9977653 44 7899999974
No 203
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.54 E-value=1.3e-13 Score=96.33 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=80.3
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccccc----C-C--CcccE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE----W-R--GHVDT 116 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~----~-~--~~~D~ 116 (161)
++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++ +++++.+|+.+.. . . .+||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 5679999999999999999985 2 45999999999999999999988887 5999999986531 1 1 47999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+++.+ ......+++.+.+.++++++++.
T Consensus 152 V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 152 IFIDAD-----KRNYPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp EEECSC-----GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred EEECCC-----HHHHHHHHHHHHHHcCCCeEEEE
Confidence 999876 24456889999999986666655
No 204
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.54 E-value=1.6e-14 Score=99.69 Aligned_cols=103 Identities=20% Similarity=0.204 Sum_probs=77.1
Q ss_pred CCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHH----HHhhcCC-ceEEEEcccccccCCC-cccEEEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASE----NAADLEL-DIDFVQCDIRNLEWRG-HVDTVVM 119 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~----~~~~~~~-~~~~~~~d~~~~~~~~-~~D~i~~ 119 (161)
.++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.+.+ +....++ ++.++++|+.+++... . |.++.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 477899999999999999999873 4699999999998885433 3334555 7999999999987654 5 88877
Q ss_pred CCCCCCC---CCCcchHHHHHHHhhcCCcEEEEe
Q 031325 120 NPPFGTR---KKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 120 ~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
..++... .......+++++.+.+++++.++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 6665432 112225899999999986555554
No 205
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.53 E-value=4.2e-14 Score=98.30 Aligned_cols=90 Identities=22% Similarity=0.216 Sum_probs=73.6
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccc-cccCC-C-cccEEEECCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIR-NLEWR-G-HVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~-~~D~i~~~~p~ 123 (161)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++. .+++++++|+. .++.. . +||+|++++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~~~fD~v~~~~-- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA----PHADVYEWNGKGELPAGLGAPFGLIVSRR-- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC----TTSEEEECCSCSSCCTTCCCCEEEEEEES--
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC----CCceEEEcchhhccCCcCCCCEEEEEeCC--
Confidence 3678999999999999999999854 9999999999999999882 26899999995 45544 3 899999972
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEE
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
.....+..+.+.+++++.++
T Consensus 120 ------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 ------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ------CCSGGGGGHHHHEEEEEEEE
T ss_pred ------CHHHHHHHHHHHcCCCcEEE
Confidence 23377888999998766665
No 206
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.53 E-value=2.9e-14 Score=94.73 Aligned_cols=94 Identities=17% Similarity=0.203 Sum_probs=77.1
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~ 125 (161)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++. -++.+..+| .+... +||+|+++.++++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~v~~~~~d---~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF----DSVITLSDP---KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC----TTSEEESSG---GGSCTTCEEEEEEESCSTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC----CCcEEEeCC---CCCCCCceEEEEEccchhc
Confidence 3677999999999999999998765 9999999999999999882 168999999 33333 8999999999887
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.. ....+++++.+.+++++.++.
T Consensus 88 ~~--~~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 88 MD--DKQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp CS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred cc--CHHHHHHHHHHhcCCCCEEEE
Confidence 64 345899999999986555544
No 207
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=1e-13 Score=100.57 Aligned_cols=104 Identities=11% Similarity=0.087 Sum_probs=80.5
Q ss_pred CCeEEEecCCcchHHHHHHH-cCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC---CCcccEEEECCCC
Q 031325 49 NKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW---RGHVDTVVMNPPF 123 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~---~~~~D~i~~~~p~ 123 (161)
..+|||+|||+|.++.++++ ++..+++++|+++.+++.+++++..... +++++.+|+.++.. ..+||+|+++.+.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 34999999999999999998 4445999999999999999999865433 79999999987532 2389999998754
Q ss_pred CCCC--CCcchHHHHHHHhhcCCcEEEEecc
Q 031325 124 GTRK--KGVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 124 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
+... .-...++++.+.+.|++++.++.+.
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 4321 1123589999999998655555543
No 208
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.53 E-value=8.7e-14 Score=103.54 Aligned_cols=97 Identities=25% Similarity=0.197 Sum_probs=80.7
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc---------------CC-ceEEEEcccccccC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL---------------EL-DIDFVQCDIRNLEW 110 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~---------------~~-~~~~~~~d~~~~~~ 110 (161)
++.+|||+|||+|.+++.+++. +..+|+++|+++.+++.+++|++.+ ++ +++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6789999999999999999987 5568999999999999999999998 77 59999999987643
Q ss_pred C--CcccEEEECCCCCCCCCCcchHHHHHHHhhcCC--cEEEEe
Q 031325 111 R--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ--AVYSLH 150 (161)
Q Consensus 111 ~--~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 150 (161)
. ..||+|++|||+. ...+++.+.+.+++ .+|+.|
T Consensus 127 ~~~~~fD~I~lDP~~~------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGS------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSSC------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCCC------HHHHHHHHHHhcCCCCEEEEEe
Confidence 2 3799999998742 24888999998873 455554
No 209
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.53 E-value=1.9e-13 Score=108.68 Aligned_cols=107 Identities=23% Similarity=0.220 Sum_probs=80.4
Q ss_pred CcccccCCCCChhHHHHHHHHHHhhcC--CCCCCeEEEecCCcchHHHHHHHcC----CCeEEEEeCChHHHHHH--HHH
Q 031325 19 PKVELEQYPTGPHIASRMLYTAENSFG--DVSNKVVADFGCGCGTLGAAATLLG----ADQVIAIDIDSDSLELA--SEN 90 (161)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vlD~g~G~G~~~~~la~~~----~~~v~~~D~~~~~~~~a--~~~ 90 (161)
.+...+.|+++++++..|+..+....+ ..++.+|+|+|||+|.+++.+++.. ..+++|+|+++.+++.| +.+
T Consensus 290 ~Rkk~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlN 369 (878)
T 3s1s_A 290 GRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLG 369 (878)
T ss_dssp SCCCCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHH
T ss_pred hCCcCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHH
Confidence 456778999999999999887333222 2357899999999999999998752 24899999999999999 666
Q ss_pred Hhh----cCC-ceEEEEcccccccC--CCcccEEEECCCCCC
Q 031325 91 AAD----LEL-DIDFVQCDIRNLEW--RGHVDTVVMNPPFGT 125 (161)
Q Consensus 91 ~~~----~~~-~~~~~~~d~~~~~~--~~~~D~i~~~~p~~~ 125 (161)
+.. .+. ...+...|...... ...||+|++||||..
T Consensus 370 L~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~ 411 (878)
T 3s1s_A 370 LLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVS 411 (878)
T ss_dssp TTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCS
T ss_pred HHHhhhhcCCCcceEEecchhcccccccCCCCEEEECCCccc
Confidence 554 333 23566667766332 238999999999954
No 210
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.53 E-value=2.1e-13 Score=103.77 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=84.0
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc-CC-CeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC--C-CcccEEE
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW--R-GHVDTVV 118 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--~-~~~D~i~ 118 (161)
...++.+|||+|||+|..+..+++. +. .+++++|+++.+++.+++++++.|+ ++.++++|+.+.+. . ..||+|+
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEE
Confidence 4557889999999999999999985 32 6999999999999999999999998 89999999988753 2 3799999
Q ss_pred ECCCCCCCCC----Cc----------------chHHHHHHHhhcCCcEEEE
Q 031325 119 MNPPFGTRKK----GV----------------DMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 119 ~~~p~~~~~~----~~----------------~~~~~~~~~~~~~~~~~~~ 149 (161)
+|||+..... .. +..+++.+.+.+++++.++
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lv 386 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLL 386 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 9999853311 00 1467888999988544444
No 211
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.53 E-value=3.5e-13 Score=98.76 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=81.6
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc--C---CceEEEEcccccccC---CCcccEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL--E---LDIDFVQCDIRNLEW---RGHVDTV 117 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~--~---~~~~~~~~d~~~~~~---~~~~D~i 117 (161)
..+.+|||+|||+|..+..+++. +..+|+++|+|+.+++.|++++... + -+++++.+|+.+... ..+||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 45689999999999999999987 3569999999999999999988652 2 279999999987522 2389999
Q ss_pred EECCCC--CCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 118 VMNPPF--GTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 118 ~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
++|++- +....-...++++.+.+.|++++.++.+
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 998763 2212111468999999999866666654
No 212
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.53 E-value=3e-13 Score=100.48 Aligned_cols=111 Identities=14% Similarity=0.025 Sum_probs=89.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcc
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHV 114 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~ 114 (161)
..+...+...++.+|||+|||+|..+..+++. +..+++++|+ +.+++.+++++...++ ++++..+|+.+..+. .|
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~-~~ 269 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD-GA 269 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS-SC
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC-Cc
Confidence 44444555556789999999999999999886 3459999999 9999999999988876 799999999843222 79
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+|++...+++.......+.++++.+.++++++++.
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 999999998877666666899999999986555544
No 213
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.53 E-value=2.2e-13 Score=94.50 Aligned_cols=97 Identities=16% Similarity=0.120 Sum_probs=77.1
Q ss_pred CCCCCeEEEecCCcchHHHHHHHc-CC-CeEEEEeCChHHHHHHHHHHhhcCC------ceEEEEcccccccCC-CcccE
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIRNLEWR-GHVDT 116 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~-~~~D~ 116 (161)
..++.+|||+|||+|..+..+++. +. .+++++|+++.+++.+++++...+. ++.+..+|+...... ..||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 446789999999999999999986 32 4999999999999999999887552 789999999865443 38999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+++.++.+ .++.+.+.+++++.++.
T Consensus 155 i~~~~~~~~--------~~~~~~~~LkpgG~lv~ 180 (226)
T 1i1n_A 155 IHVGAAAPV--------VPQALIDQLKPGGRLIL 180 (226)
T ss_dssp EEECSBBSS--------CCHHHHHTEEEEEEEEE
T ss_pred EEECCchHH--------HHHHHHHhcCCCcEEEE
Confidence 999988753 23567888875555444
No 214
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.53 E-value=1.1e-13 Score=101.67 Aligned_cols=101 Identities=18% Similarity=0.229 Sum_probs=78.7
Q ss_pred hcCCCCCCeEEEecCCcchHHHHHHHc-CC-CeEEEEeCChHHHHHHHHHHhhcC------------CceEEEEcccccc
Q 031325 43 SFGDVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLE------------LDIDFVQCDIRNL 108 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~G~~~~~la~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~------------~~~~~~~~d~~~~ 108 (161)
.....++.+|||+|||+|.++..+++. +. .+++++|+++.+++.|++++...+ .++++..+|+.+.
T Consensus 100 ~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~ 179 (336)
T 2b25_A 100 MMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA 179 (336)
T ss_dssp HHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCC
T ss_pred hcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHc
Confidence 334567889999999999999999986 43 699999999999999999988632 2799999999886
Q ss_pred c--CCC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 109 E--WRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 109 ~--~~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. ... .||+|++++|..+ ..+..+.+.+++++.++.
T Consensus 180 ~~~~~~~~fD~V~~~~~~~~-------~~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 180 TEDIKSLTFDAVALDMLNPH-------VTLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp C-------EEEEEECSSSTT-------TTHHHHGGGEEEEEEEEE
T ss_pred ccccCCCCeeEEEECCCCHH-------HHHHHHHHhcCCCcEEEE
Confidence 3 223 7999999877322 378889999986555554
No 215
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.53 E-value=2.9e-13 Score=94.36 Aligned_cols=100 Identities=13% Similarity=-0.039 Sum_probs=72.3
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC----CCcccEEE
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW----RGHVDTVV 118 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~i~ 118 (161)
...++.+|||+|||+|+.+..+++. +..+|+++|+++.+++.+.+..+.. .++.++++|+..... ...||+|+
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEE
Confidence 4668899999999999999999986 3569999999999876554444332 279999999976432 23899999
Q ss_pred ECCCCCCCCCCcchHHH-HHHHhhcCCcEEEEe
Q 031325 119 MNPPFGTRKKGVDMDFL-SMALKVASQAVYSLH 150 (161)
Q Consensus 119 ~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 150 (161)
+|.+. ....+.+ ..+.+.|++++.++.
T Consensus 152 ~d~a~-----~~~~~il~~~~~~~LkpGG~lvi 179 (232)
T 3id6_C 152 VDIAQ-----PDQTDIAIYNAKFFLKVNGDMLL 179 (232)
T ss_dssp ECCCC-----TTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ecCCC-----hhHHHHHHHHHHHhCCCCeEEEE
Confidence 99774 2333444 444558885555443
No 216
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.53 E-value=1.6e-13 Score=101.87 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=87.4
Q ss_pred HHhhcCCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccE
Q 031325 40 AENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDT 116 (161)
Q Consensus 40 ~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~ 116 (161)
+...+...++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++...++ +++++.+|+.+.. ...||+
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~D~ 251 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL-PVTADV 251 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SCCEEE
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC-CCCCCE
Confidence 3334444567899999999999999999863 459999999 9999999999988777 6999999997622 225999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+++..+++.......++++++.+.++++++++.
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLV 285 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 9999998876655556899999999986554443
No 217
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.52 E-value=6.9e-14 Score=109.24 Aligned_cols=81 Identities=19% Similarity=0.246 Sum_probs=70.6
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC--C-CcccEEEECCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW--R-GHVDTVVMNPPF 123 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--~-~~~D~i~~~~p~ 123 (161)
.+.+|||+|||.|.++..||+.|. +|+|+|+++.+++.|+.+....+. ++++.++++.++.. . .+||+|+|.-++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 457999999999999999999977 999999999999999999988774 89999999988732 2 389999999998
Q ss_pred CCCCCC
Q 031325 124 GTRKKG 129 (161)
Q Consensus 124 ~~~~~~ 129 (161)
+|....
T Consensus 145 ehv~~~ 150 (569)
T 4azs_A 145 HHIVHL 150 (569)
T ss_dssp HHHHHH
T ss_pred hcCCCH
Confidence 886443
No 218
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.52 E-value=2.6e-13 Score=94.17 Aligned_cols=111 Identities=15% Similarity=0.187 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCC------CeEEEEeCChHHHHHHHHHHhhcC-----C-c
Q 031325 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA------DQVIAIDIDSDSLELASENAADLE-----L-D 97 (161)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~------~~v~~~D~~~~~~~~a~~~~~~~~-----~-~ 97 (161)
+.....++..+.. ...++.+|||+|||+|.++..+++... .+++++|+++.+++.+++++...+ . +
T Consensus 64 p~~~~~~~~~l~~--~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 141 (227)
T 2pbf_A 64 PHMHALSLKRLIN--VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDN 141 (227)
T ss_dssp HHHHHHHHHHHTT--TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTT
T ss_pred hHHHHHHHHHHHh--hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCC
Confidence 3444444444321 234678999999999999999998632 499999999999999999998876 4 7
Q ss_pred eEEEEccccccc----C-CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 98 IDFVQCDIRNLE----W-RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 98 ~~~~~~d~~~~~----~-~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+.+..+|+.+.. . ..+||+|+++.++++. ++.+.+.+++++.++.
T Consensus 142 v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~ 191 (227)
T 2pbf_A 142 FKIIHKNIYQVNEEEKKELGLFDAIHVGASASEL--------PEILVDLLAENGKLII 191 (227)
T ss_dssp EEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEE
T ss_pred EEEEECChHhcccccCccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEE
Confidence 999999998754 2 2389999999887642 3667788875444433
No 219
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.52 E-value=4.3e-14 Score=100.04 Aligned_cols=106 Identities=12% Similarity=0.091 Sum_probs=82.9
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC----------------------------
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---------------------------- 96 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---------------------------- 96 (161)
+..++.+|||+|||+|.++..+++.+..+++|+|+|+.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4456789999999999999999887556999999999999999998865431
Q ss_pred --ce-EEEEcccccccC--C---CcccEEEECCCCCCCCCC--cchHHHHHHHhhcCCcEEEEe
Q 031325 97 --DI-DFVQCDIRNLEW--R---GHVDTVVMNPPFGTRKKG--VDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 97 --~~-~~~~~d~~~~~~--~---~~~D~i~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++ .+..+|+.+... . .+||+|+++..+++.... ....++.++.++++++++++.
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 196 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVM 196 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Confidence 17 899999988643 2 379999998877633222 456889999999986555544
No 220
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.52 E-value=1.1e-13 Score=102.13 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=89.8
Q ss_pred HHhhcCCCC-CCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccccc--CCCc
Q 031325 40 AENSFGDVS-NKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE--WRGH 113 (161)
Q Consensus 40 ~~~~~~~~~-~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~~ 113 (161)
+...+...+ +.+|||+|||+|.++..+++. +..+++++|+ +.+++.+++++...++ +++++.+|+.+.+ ....
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCC
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCC
Confidence 333334345 789999999999999999886 4459999999 8999999999988877 6999999999876 4447
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
||+|++...+++.........++++.+.+++++.++.
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 9999999998887666567999999999986555544
No 221
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.52 E-value=5.7e-14 Score=102.56 Aligned_cols=104 Identities=13% Similarity=0.195 Sum_probs=80.2
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccccC--CCcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW--RGHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~--~~~~D~i~~ 119 (161)
.+.+|||+|||+|.++..+++. +..+++++|+|+.+++.+++++... ..+++++.+|+.+... ..+||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 5679999999999999999987 4569999999999999999998652 2279999999877432 238999999
Q ss_pred CCC--CCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 120 NPP--FGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 120 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
|++ ++....-...++++.+.+.+++++.++..
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 984 32211111268999999999865555553
No 222
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.52 E-value=3.1e-13 Score=100.23 Aligned_cols=102 Identities=15% Similarity=0.159 Sum_probs=85.6
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccccc--CCCcccEEEECCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE--WRGHVDTVVMNPP 122 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~~~D~i~~~~p 122 (161)
...+|||+|||+|..+..+++. +..+++++|+ +.+++.+++++...++ +++++.+|+.+.. ....||+|++...
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 5679999999999999999885 3459999999 9999999999988776 7999999998852 3358999999999
Q ss_pred CCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 123 FGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+++.......+.++++.+.+++++.++.
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYI 285 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 8877666666889999999986555444
No 223
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.52 E-value=1.5e-13 Score=97.21 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=65.9
Q ss_pred cCCCCC--CeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc-------C-C--ceEEEEcccccccCC
Q 031325 44 FGDVSN--KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-------E-L--DIDFVQCDIRNLEWR 111 (161)
Q Consensus 44 ~~~~~~--~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~-------~-~--~~~~~~~d~~~~~~~ 111 (161)
....++ .+|||+|||+|..++.++.++. +|+++|+++.++++++++++.. + + +++++++|..++...
T Consensus 82 l~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 82 VGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp TTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred hcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 333456 8999999999999999999866 8999999999888887776532 2 3 689999999885332
Q ss_pred --CcccEEEECCCCCCC
Q 031325 112 --GHVDTVVMNPPFGTR 126 (161)
Q Consensus 112 --~~~D~i~~~~p~~~~ 126 (161)
..||+|++||||...
T Consensus 161 ~~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 161 ITPRPQVVYLDPMFPHK 177 (258)
T ss_dssp CSSCCSEEEECCCCCCC
T ss_pred CcccCCEEEEcCCCCCc
Confidence 279999999999764
No 224
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.51 E-value=8.9e-14 Score=100.47 Aligned_cols=105 Identities=13% Similarity=0.117 Sum_probs=79.0
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhh----c-CCceEEEEcccccccC--CCcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD----L-ELDIDFVQCDIRNLEW--RGHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~----~-~~~~~~~~~d~~~~~~--~~~~D~i~~ 119 (161)
.+.+|||+|||+|..+..+++. +..+++++|+|+.+++.+++++.. . .-+++++.+|+.+... ..+||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999987 567999999999999999998754 1 2279999999877432 238999999
Q ss_pred CCCCCCC---CCCcchHHHHHHHhhcCCcEEEEecc
Q 031325 120 NPPFGTR---KKGVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 120 ~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
|+|..+. ..-...++++.+.+.|++++.++...
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9874311 11133689999999998666655543
No 225
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.51 E-value=2.6e-14 Score=106.89 Aligned_cols=77 Identities=22% Similarity=0.178 Sum_probs=67.4
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc--CC-ceEEEEcccccccCC---CcccEEEECC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL--EL-DIDFVQCDIRNLEWR---GHVDTVVMNP 121 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~-~~~~~~~d~~~~~~~---~~~D~i~~~~ 121 (161)
++.+|||+|||+|..+..+++.+ .+|+++|+|+.+++.+++|++.. ++ +++++++|+.+.... ..||+|++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 47899999999999999999875 49999999999999999999988 77 899999999885221 2799999999
Q ss_pred CCCC
Q 031325 122 PFGT 125 (161)
Q Consensus 122 p~~~ 125 (161)
||..
T Consensus 172 Prr~ 175 (410)
T 3ll7_A 172 ARRS 175 (410)
T ss_dssp EEC-
T ss_pred CCcC
Confidence 9865
No 226
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.51 E-value=1.4e-13 Score=99.84 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=79.4
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccccC---CCcccEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW---RGHVDTV 117 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~---~~~~D~i 117 (161)
.++.+|||+|||+|..+..+++. +..+++++|+|+.+++.+++++... .-+++++.+|+.+... ..+||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 45689999999999999999987 4569999999999999999987421 1279999999988653 2389999
Q ss_pred EECCCCCCCCCC--cchHHHHHHHhhcCCcEEEEec
Q 031325 118 VMNPPFGTRKKG--VDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 118 ~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+++++....... ...++++.+.+.|++++.++..
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999886542211 1258999999999865555554
No 227
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.51 E-value=3.7e-13 Score=99.62 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=88.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcc
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHV 114 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~ 114 (161)
..+...+...++.+|||+|||+|.++..+++. +..+++++|+ +.+++.+++++...++ +++++.+|+.+.+.. .+
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 257 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-EA 257 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC-CC
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC-CC
Confidence 34444445556789999999999999999986 3459999999 9999999999988776 599999999887544 45
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEE
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (161)
|+|++...+++.......++++++.+.+++++.+
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l 291 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRL 291 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEE
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEE
Confidence 9999999988776555678999999999854444
No 228
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.51 E-value=5.7e-14 Score=99.09 Aligned_cols=93 Identities=14% Similarity=0.204 Sum_probs=73.8
Q ss_pred CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccc
Q 031325 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (161)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~ 105 (161)
|..++.+...+++.+ ...++.+|||+|||+|.++..+++.+..+++++|+|+.+++.++++ . ..+++++++|+
T Consensus 13 fl~d~~i~~~iv~~~----~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~--~~~v~~i~~D~ 85 (249)
T 3ftd_A 13 LLVSEGVLKKIAEEL----NIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G--DERLEVINEDA 85 (249)
T ss_dssp CEECHHHHHHHHHHT----TCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C--CTTEEEECSCT
T ss_pred ccCCHHHHHHHHHhc----CCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c--CCCeEEEEcch
Confidence 555666666655543 4457889999999999999999998656999999999999999877 2 23799999999
Q ss_pred ccccCCC--cccEEEECCCCCC
Q 031325 106 RNLEWRG--HVDTVVMNPPFGT 125 (161)
Q Consensus 106 ~~~~~~~--~~D~i~~~~p~~~ 125 (161)
.+++... ....|++|+||+.
T Consensus 86 ~~~~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 86 SKFPFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp TTCCGGGSCSSEEEEEECCTTT
T ss_pred hhCChhHccCCcEEEEECchhc
Confidence 9887653 2348899999965
No 229
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.51 E-value=1.7e-13 Score=100.33 Aligned_cols=102 Identities=16% Similarity=0.053 Sum_probs=84.9
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEECCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~~~p~ 123 (161)
.+..+|+|+|||+|..+..+++. +..+++++|+ +.+++.+++++...++ ++++..+|+.+..+. .||+|++...+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-SCSEEEEESCG
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC-CCcEEEEehhh
Confidence 34679999999999999999875 4559999999 9999999999988776 799999999743222 79999999998
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++.......+.++++.+.++++++++.
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i 272 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLV 272 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 887766567999999999986555554
No 230
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.50 E-value=1.5e-13 Score=98.64 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=82.7
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcC-----CceEEEEcccccccC--CCcccEEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLE-----LDIDFVQCDIRNLEW--RGHVDTVV 118 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~--~~~~D~i~ 118 (161)
.++.+|||+|||+|..+..+++. +..+++++|+++.+++.+++++...+ -+++++.+|+.+... ..+||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 45689999999999999999987 35699999999999999999886532 278999999987532 23899999
Q ss_pred ECCCCCCCCCCc--chHHHHHHHhhcCCcEEEEecc
Q 031325 119 MNPPFGTRKKGV--DMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 119 ~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
++++........ ..++++.+.+.|++++.++.+.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 987654322211 2589999999998666666553
No 231
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.50 E-value=4.6e-13 Score=95.76 Aligned_cols=102 Identities=15% Similarity=0.120 Sum_probs=81.5
Q ss_pred CCCeEEEecCCc---chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc-----------C-C
Q 031325 48 SNKVVADFGCGC---GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE-----------W-R 111 (161)
Q Consensus 48 ~~~~vlD~g~G~---G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----------~-~ 111 (161)
...+|||+|||+ |.++..+.+. +..+|+++|+|+.+++.+++++...+ ++.++.+|+.+.. . .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDP-NTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCT-TEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCC-CeEEEEeeCCCchhhhccchhhccCCC
Confidence 347999999999 9887666654 34599999999999999999885432 7899999997632 1 1
Q ss_pred CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 112 GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 112 ~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
..||+|+++..+++.........+.++.+.++++++++.
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i 194 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFM 194 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEE
Confidence 279999999999988766677999999999986555554
No 232
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.50 E-value=1e-13 Score=100.54 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=78.7
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhh--c---CCceEEEEccccccc-C-CCcccEEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD--L---ELDIDFVQCDIRNLE-W-RGHVDTVV 118 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~--~---~~~~~~~~~d~~~~~-~-~~~~D~i~ 118 (161)
..+.+|||+|||+|..+..++++ +..+++++|+|+.+++.|++++.. . .-+++++.+|+.+.. . ..+||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 45689999999999999999987 356999999999999999998765 1 227999999997742 2 23899999
Q ss_pred ECCCCCCCCC--CcchHHHHHHHhhcCCcEEEEec
Q 031325 119 MNPPFGTRKK--GVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 119 ~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+|++...... ....++++.+.+.|++++.++.+
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEe
Confidence 9988643221 12358899999999865555543
No 233
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.50 E-value=5.4e-14 Score=100.66 Aligned_cols=95 Identities=12% Similarity=0.172 Sum_probs=74.8
Q ss_pred ccCCCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCe----EEEEeCChHHHHHHHHHHhhcCCce
Q 031325 23 LEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQ----VIAIDIDSDSLELASENAADLELDI 98 (161)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~----v~~~D~~~~~~~~a~~~~~~~~~~~ 98 (161)
...|..++.+...+++.+ ...++.+|||+|||+|.++..+++.+. . |+++|+|+.+++.++++. .-++
T Consensus 21 GQ~fL~d~~i~~~iv~~~----~~~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~---~~~v 92 (279)
T 3uzu_A 21 GQNFLVDHGVIDAIVAAI----RPERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF---GELL 92 (279)
T ss_dssp SCCEECCHHHHHHHHHHH----CCCTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH---GGGE
T ss_pred CccccCCHHHHHHHHHhc----CCCCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc---CCCc
Confidence 334556777776666554 344788999999999999999998744 4 999999999999999884 2279
Q ss_pred EEEEcccccccCCCc-------ccEEEECCCCCC
Q 031325 99 DFVQCDIRNLEWRGH-------VDTVVMNPPFGT 125 (161)
Q Consensus 99 ~~~~~d~~~~~~~~~-------~D~i~~~~p~~~ 125 (161)
+++++|+.+++...- ...|++|+||+.
T Consensus 93 ~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~i 126 (279)
T 3uzu_A 93 ELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNI 126 (279)
T ss_dssp EEEESCGGGCCGGGGSCSSSSCCEEEEEECCHHH
T ss_pred EEEECChhcCChhHhcccccCCceEEEEccCccc
Confidence 999999999876432 347999999875
No 234
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.50 E-value=1.3e-13 Score=102.78 Aligned_cols=115 Identities=16% Similarity=0.105 Sum_probs=86.6
Q ss_pred hhHHHHHHHHHHhhcCC--CCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-c--eEEEE
Q 031325 30 PHIASRMLYTAENSFGD--VSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-D--IDFVQ 102 (161)
Q Consensus 30 ~~~~~~~~~~~~~~~~~--~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~--~~~~~ 102 (161)
....+.+...+...+.. .++.+|||++||+|.+++.++.. +..+|+++|+++.+++.+++|++.+++ + +++++
T Consensus 32 ~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~ 111 (392)
T 3axs_A 32 MRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHG 111 (392)
T ss_dssp GHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred cHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEe
Confidence 34455554333322221 35789999999999999999985 446999999999999999999999998 4 99999
Q ss_pred cccccccC---CCcccEEEECCCCCCCCCCcchHHHHHHHhhcC--CcEEEEe
Q 031325 103 CDIRNLEW---RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS--QAVYSLH 150 (161)
Q Consensus 103 ~d~~~~~~---~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 150 (161)
+|+.+... ...||+|++|| |+ ....+++.+.+.++ +.+|+.|
T Consensus 112 ~Da~~~l~~~~~~~fD~V~lDP-~g-----~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 112 MEANFFLRKEWGFGFDYVDLDP-FG-----TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp SCHHHHHHSCCSSCEEEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHhhCCCCcEEEECC-Cc-----CHHHHHHHHHHHhCCCCEEEEEe
Confidence 99987543 23799999999 32 22368888888886 4555555
No 235
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.50 E-value=8.8e-14 Score=99.98 Aligned_cols=104 Identities=11% Similarity=-0.022 Sum_probs=76.9
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc-----------------CC-------------
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-----------------EL------------- 96 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~-----------------~~------------- 96 (161)
.++.+|||+|||+|.....++..+..+|+|+|+|+.+++.|++++... +.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367899999999999655555544459999999999999998865431 10
Q ss_pred -ceEEEEccccc-ccCC------CcccEEEECCCCCCCCCC--cchHHHHHHHhhcCCcEEEEe
Q 031325 97 -DIDFVQCDIRN-LEWR------GHVDTVVMNPPFGTRKKG--VDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 97 -~~~~~~~d~~~-~~~~------~~~D~i~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.+.++.+|+.+ .+.. .+||+|+++..+++.... .....++++.++|+++++++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 14577778877 4321 259999999888775443 566899999999996666554
No 236
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.49 E-value=1e-13 Score=100.94 Aligned_cols=104 Identities=15% Similarity=0.136 Sum_probs=81.4
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhh--c----CCceEEEEccccccc-C-CCcccEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD--L----ELDIDFVQCDIRNLE-W-RGHVDTVV 118 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~--~----~~~~~~~~~d~~~~~-~-~~~~D~i~ 118 (161)
.+.+|||+|||+|..+..+++. +..+++++|+++.+++.+++++.. . .-+++++.+|+.+.. . ..+||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 5679999999999999999987 456999999999999999998764 1 227999999998742 2 23899999
Q ss_pred ECCCCCC---CC-CC-cchHHHHHHHhhcCCcEEEEec
Q 031325 119 MNPPFGT---RK-KG-VDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 119 ~~~p~~~---~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
++++.+. .. .. ...++++.+.+.|++++.++.+
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 9988654 11 11 1468999999999865555554
No 237
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.49 E-value=4.1e-13 Score=99.31 Aligned_cols=108 Identities=15% Similarity=0.140 Sum_probs=86.5
Q ss_pred HhhcCCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEE
Q 031325 41 ENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTV 117 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i 117 (161)
...+...++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++...++ +++++.+|+.+..+ ..||+|
T Consensus 176 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~D~v 253 (360)
T 1tw3_A 176 AAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP-RKADAI 253 (360)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-SCEEEE
T ss_pred HHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC-CCccEE
Confidence 333444567899999999999999998863 458999999 9999999999988777 69999999976322 259999
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++..++++.......++++++.+.+++++.++.
T Consensus 254 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 286 (360)
T 1tw3_A 254 ILSFVLLNWPDHDAVRILTRCAEALEPGGRILI 286 (360)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEcccccCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999998876555556899999999986554443
No 238
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.49 E-value=1.2e-13 Score=100.50 Aligned_cols=105 Identities=11% Similarity=0.099 Sum_probs=77.7
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccccC--CCcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW--RGHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~--~~~~D~i~~ 119 (161)
.+.+|||+|||+|..+..+++. +..+++++|+|+.+++.|++++... .-+++++.+|+.+... ..+||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 5679999999999999999987 4569999999999999999998653 2278999999987422 238999999
Q ss_pred CCCCCCCCC-Ccc-hHHHHHHHhhcCCcEEEEecc
Q 031325 120 NPPFGTRKK-GVD-MDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 120 ~~p~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 152 (161)
|++...... ... .++++.+.+.|++++.++.+.
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 986432211 111 589999999998666665543
No 239
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.49 E-value=1.1e-12 Score=94.18 Aligned_cols=108 Identities=21% Similarity=0.191 Sum_probs=76.0
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeC-ChHHHHHHHHHH-----hhcCC------ceEE
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDI-DSDSLELASENA-----ADLEL------DIDF 100 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~-~~~~~~~a~~~~-----~~~~~------~~~~ 100 (161)
...+.+.+.......++.+|||+|||+|.+++.+++.+..+|+++|+ ++.+++.+++++ ...++ ++.+
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 33445555444333567899999999999999999887669999999 899999999998 44433 4667
Q ss_pred EEccccc----cc---CCCcccEEEE-CCCCCCCCCCcchHHHHHHHhhcC
Q 031325 101 VQCDIRN----LE---WRGHVDTVVM-NPPFGTRKKGVDMDFLSMALKVAS 143 (161)
Q Consensus 101 ~~~d~~~----~~---~~~~~D~i~~-~~p~~~~~~~~~~~~~~~~~~~~~ 143 (161)
...+..+ +. ...+||+|++ +.+|+ ......+++.+.++++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~---~~~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADLLSF---HQAHDALLRSVKMLLA 191 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESCCSC---GGGHHHHHHHHHHHBC
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCcccC---hHHHHHHHHHHHHHhc
Confidence 7555433 21 1238999997 55554 2345588899999888
No 240
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.48 E-value=3e-13 Score=93.99 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CC------CeEEEEeCChHHHHHHHHHHhhcC-----C-
Q 031325 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GA------DQVIAIDIDSDSLELASENAADLE-----L- 96 (161)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~------~~v~~~D~~~~~~~~a~~~~~~~~-----~- 96 (161)
+.....+++.+.. ...++.+|||+|||+|.++..+++. +. .+++++|+++.+++.+++++...+ .
T Consensus 68 p~~~~~~~~~l~~--~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 145 (227)
T 1r18_A 68 PHMHAFALEYLRD--HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG 145 (227)
T ss_dssp HHHHHHHHHHTTT--TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHh--hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC
Confidence 3444444443321 2346789999999999999999885 32 499999999999999999987754 3
Q ss_pred ceEEEEcccccccCC-CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 97 DIDFVQCDIRNLEWR-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 97 ~~~~~~~d~~~~~~~-~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++.+..+|..+.... ..||+|+++.++++.. +.+.+.+++++.++.
T Consensus 146 ~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 146 QLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIV 192 (227)
T ss_dssp SEEEEESCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEE
T ss_pred ceEEEECCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEE
Confidence 789999999873333 4899999998876532 567788875554444
No 241
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.48 E-value=1.7e-13 Score=99.03 Aligned_cols=84 Identities=20% Similarity=0.328 Sum_probs=69.9
Q ss_pred HhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC--C----Cc
Q 031325 41 ENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--R----GH 113 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--~----~~ 113 (161)
...+...++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.|++++...+-+++++++|+.+++. . ..
T Consensus 19 l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~ 98 (301)
T 1m6y_A 19 IEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEK 98 (301)
T ss_dssp HHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSC
T ss_pred HHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCC
Confidence 33334557889999999999999999987 34699999999999999999998776579999999987642 1 37
Q ss_pred ccEEEECCCCC
Q 031325 114 VDTVVMNPPFG 124 (161)
Q Consensus 114 ~D~i~~~~p~~ 124 (161)
||.|++|+|+.
T Consensus 99 ~D~Vl~D~gvS 109 (301)
T 1m6y_A 99 VDGILMDLGVS 109 (301)
T ss_dssp EEEEEEECSCC
T ss_pred CCEEEEcCccc
Confidence 99999999864
No 242
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.48 E-value=2.7e-13 Score=99.33 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=86.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcc
Q 031325 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHV 114 (161)
Q Consensus 38 ~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~ 114 (161)
..+........ .+|||+|||+|..+..+++. +..+++++|+ +.+++.+++++...++ +++++.+|+.+. ....|
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 234 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE-VPSNG 234 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC-CCSSC
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC-CCCCC
Confidence 33444443334 89999999999999999886 3459999999 9999999998876654 699999999873 33479
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+|++...+++.......+.++++.+.+++++.++.
T Consensus 235 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 235 DIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 999999998876655556899999999985554443
No 243
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.48 E-value=4.1e-13 Score=95.83 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=80.6
Q ss_pred CCCeEEEecCCcch----HHHHHHHc-C----CCeEEEEeCChHHHHHHHHHHhh-----------------------cC
Q 031325 48 SNKVVADFGCGCGT----LGAAATLL-G----ADQVIAIDIDSDSLELASENAAD-----------------------LE 95 (161)
Q Consensus 48 ~~~~vlD~g~G~G~----~~~~la~~-~----~~~v~~~D~~~~~~~~a~~~~~~-----------------------~~ 95 (161)
++.+|+|+|||+|. +++.+++. + ..+|+|+|+|+.+++.|+++... .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999997 56666654 3 24899999999999999986410 01
Q ss_pred ---------CceEEEEcccccccCC--CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 96 ---------LDIDFVQCDIRNLEWR--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 96 ---------~~~~~~~~d~~~~~~~--~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
-++.|.++|+.+.+.. ..||+|+|...+.+.......+.+..+.+.|+++++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 1588999999885433 489999998888777777677999999999997777766
No 244
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.47 E-value=4.7e-14 Score=99.67 Aligned_cols=92 Identities=12% Similarity=0.159 Sum_probs=71.1
Q ss_pred CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCe--EEEEeCChHHHHHHHHHHhhcCCceEEEEc
Q 031325 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQ--VIAIDIDSDSLELASENAADLELDIDFVQC 103 (161)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~--v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~ 103 (161)
|..++.+...+++.+ ...++.+|||+|||+|.++. +++ + .+ |+++|+|+.+++.++++....+ +++++++
T Consensus 3 fL~d~~i~~~iv~~~----~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~-~v~~i~~ 74 (252)
T 1qyr_A 3 FLNDQFVIDSIVSAI----NPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGP-KLTIYQQ 74 (252)
T ss_dssp EECCHHHHHHHHHHH----CCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGG-GEEEECS
T ss_pred CcCCHHHHHHHHHhc----CCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCC-ceEEEEC
Confidence 345566666666554 34477899999999999999 765 3 36 9999999999999998775432 7999999
Q ss_pred ccccccCCC------cccEEEECCCCCC
Q 031325 104 DIRNLEWRG------HVDTVVMNPPFGT 125 (161)
Q Consensus 104 d~~~~~~~~------~~D~i~~~~p~~~ 125 (161)
|+.+++... ..+.|++|+||..
T Consensus 75 D~~~~~~~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 75 DAMTFNFGELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp CGGGCCHHHHHHHHTSCEEEEEECCTTT
T ss_pred chhhCCHHHhhcccCCceEEEECCCCCc
Confidence 999876432 2479999999975
No 245
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.45 E-value=1.6e-13 Score=98.83 Aligned_cols=102 Identities=12% Similarity=0.048 Sum_probs=74.2
Q ss_pred CCCCeEEEecCCcchHHHHH----HHc-CCCeE--EEEeCChHHHHHHHHHHhhc-CC-ce--EEEEccccccc------
Q 031325 47 VSNKVVADFGCGCGTLGAAA----TLL-GADQV--IAIDIDSDSLELASENAADL-EL-DI--DFVQCDIRNLE------ 109 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~l----a~~-~~~~v--~~~D~~~~~~~~a~~~~~~~-~~-~~--~~~~~d~~~~~------ 109 (161)
.++.+|||+|||+|.++..+ +.. +...+ +|+|+|+.|++.+++++... ++ ++ .+..+++.++.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45679999999999766543 222 33344 99999999999999988653 33 44 45566666543
Q ss_pred C-CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 110 W-RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 110 ~-~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. ..+||+|++...+++... ....+.++.++|++++.++.
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD--IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCC--HHHHHHHHHHHcCCCcEEEE
Confidence 1 238999999999888643 34899999999996665554
No 246
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.45 E-value=5.6e-13 Score=92.21 Aligned_cols=95 Identities=24% Similarity=0.263 Sum_probs=76.7
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc--cCC-CcccEEEECCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL--EWR-GHVDTVVMNPPF 123 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~-~~~D~i~~~~p~ 123 (161)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++. ..+..+|+.+. +.. .+||+|+++..+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVIFGDVL 103 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEEEESCG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEEECChh
Confidence 467899999999999999999885 69999999999999988764 36888998763 333 389999999888
Q ss_pred CCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 124 GTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++.... ..+++.+.+.++++++++.
T Consensus 104 ~~~~~~--~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 104 EHLFDP--WAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp GGSSCH--HHHHHHTGGGEEEEEEEEE
T ss_pred hhcCCH--HHHHHHHHHHcCCCCEEEE
Confidence 776433 4899999999986555544
No 247
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.45 E-value=1.1e-12 Score=91.16 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=83.2
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
.++.+|||+|||+|-++..+. +...++++|+|+.+++.+++++...+.+..+..+|....++..++|+++++-.+++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHHh
Confidence 457799999999999999988 566999999999999999999988888889999999887777799999998777777
Q ss_pred CCCcchHHHHHHHhhcC-CcEEEEec
Q 031325 127 KKGVDMDFLSMALKVAS-QAVYSLHK 151 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~-~~~~~~~~ 151 (161)
........+ .+...++ +.+++.+.
T Consensus 182 E~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 182 EREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred hhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 544444445 5555554 66666664
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.44 E-value=8.9e-15 Score=103.00 Aligned_cols=94 Identities=20% Similarity=0.342 Sum_probs=74.7
Q ss_pred CCCChhHHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccc
Q 031325 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (161)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~ 105 (161)
+..++.....+++.+ ...++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.++++... .-+++++++|+
T Consensus 11 fl~~~~~~~~i~~~~----~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~-~~~v~~~~~D~ 84 (245)
T 1yub_A 11 FLTSEKVLNQIIKQL----NLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL-NTRVTLIHQDI 84 (245)
T ss_dssp BCCCTTTHHHHHHHC----CCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT-CSEEEECCSCC
T ss_pred CCCCHHHHHHHHHhc----CCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc-CCceEEEECCh
Confidence 555666666555443 44577899999999999999999986 5999999999999998887652 12789999999
Q ss_pred ccccCC--CcccEEEECCCCCCC
Q 031325 106 RNLEWR--GHVDTVVMNPPFGTR 126 (161)
Q Consensus 106 ~~~~~~--~~~D~i~~~~p~~~~ 126 (161)
.+++.. .+| .|++||||...
T Consensus 85 ~~~~~~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp TTTTCCCSSEE-EEEEECCSSSC
T ss_pred hhcCcccCCCc-EEEEeCCcccc
Confidence 987654 378 89999999763
No 249
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.44 E-value=7.5e-13 Score=92.70 Aligned_cols=94 Identities=19% Similarity=0.193 Sum_probs=73.5
Q ss_pred CCCeEEEecCCcchHHHHHHHc-----CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc---cC-CC-cccEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-----GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL---EW-RG-HVDTV 117 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-----~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~---~~-~~-~~D~i 117 (161)
++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.|+. ..-+++++++|+.+. +. .. +||+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 4679999999999999999885 34699999999999988871 123799999999884 32 23 69999
Q ss_pred EECCCCCCCCCCcchHHHHHHHh-hcCCcEEEEe
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALK-VASQAVYSLH 150 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 150 (161)
+++.. + ......+..+.+ .++++++++.
T Consensus 157 ~~d~~--~---~~~~~~l~~~~r~~LkpGG~lv~ 185 (236)
T 2bm8_A 157 FIDNA--H---ANTFNIMKWAVDHLLEEGDYFII 185 (236)
T ss_dssp EEESS--C---SSHHHHHHHHHHHTCCTTCEEEE
T ss_pred EECCc--h---HhHHHHHHHHHHhhCCCCCEEEE
Confidence 98776 2 245578888887 9986666655
No 250
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.44 E-value=5.9e-13 Score=93.40 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=86.7
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
++.+|||+|||.|-++..++.. +..+++++|+|+.+++.++.++...|++..+.+.|....++...+|+++++-..+++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~L 211 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCL 211 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHHh
Confidence 4679999999999999999876 667999999999999999999999999889999999887766699999999888887
Q ss_pred CCCcchHHHHHHHhhcC-CcEEEEecc
Q 031325 127 KKGVDMDFLSMALKVAS-QAVYSLHKT 152 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ 152 (161)
........+ ++...++ +++++.+..
T Consensus 212 e~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 212 ETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred hhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 555554555 6677776 666666643
No 251
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.43 E-value=1.5e-12 Score=89.92 Aligned_cols=89 Identities=15% Similarity=0.199 Sum_probs=74.2
Q ss_pred CCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCCCC
Q 031325 49 NKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTRK 127 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~~~ 127 (161)
+.+|||+|||+|.++..+++. +|+|+++.+++.++++ ++.+..+|+.+++... +||+|+++..+++..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhcc
Confidence 789999999999999988764 9999999999999886 4789999998876554 899999998888763
Q ss_pred CCcchHHHHHHHhhcCCcEEEEe
Q 031325 128 KGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
....+++.+.+.+++++.++.
T Consensus 117 --~~~~~l~~~~~~L~pgG~l~i 137 (219)
T 1vlm_A 117 --DPERALKEAYRILKKGGYLIV 137 (219)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCcEEEE
Confidence 345899999999986555444
No 252
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.43 E-value=1e-12 Score=87.25 Aligned_cols=95 Identities=19% Similarity=0.147 Sum_probs=73.3
Q ss_pred CCCCCeEEEecCCcchHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc--------CC-Ccc
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE--------WR-GHV 114 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~~-~~~ 114 (161)
..++.+|||+|||+|.++..+++. + ..+++++|+++ +++. .++.+..+|+.+.+ .. .+|
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 456789999999999999999887 3 36999999999 6542 26889999998864 33 389
Q ss_pred cEEEECCCCCCCCCCc---------chHHHHHHHhhcCCcEEEEe
Q 031325 115 DTVVMNPPFGTRKKGV---------DMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 150 (161)
|+|++++|+++..... ...+++.+.+.+++++.++.
T Consensus 90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (180)
T 1ej0_A 90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV 134 (180)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 9999999987653220 14788999999986555554
No 253
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.42 E-value=1.8e-13 Score=103.08 Aligned_cols=111 Identities=9% Similarity=0.069 Sum_probs=83.5
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCce---EEEEccccccc
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDI---DFVQCDIRNLE 109 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~---~~~~~d~~~~~ 109 (161)
...+...+.......++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ +... .+..++...++
T Consensus 92 ~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~ 166 (416)
T 4e2x_A 92 FAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVR 166 (416)
T ss_dssp HHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcc
Confidence 445556666666666788999999999999999999866 999999999999998876 3211 12234444444
Q ss_pred CC-CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 110 WR-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 110 ~~-~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.. .+||+|+++..++|.. ....+++++.++++++++++.
T Consensus 167 ~~~~~fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i 206 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVF 206 (416)
T ss_dssp HHHCCEEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCEEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEE
Confidence 33 3899999999998875 455999999999986555555
No 254
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.42 E-value=6.4e-13 Score=95.34 Aligned_cols=95 Identities=17% Similarity=0.178 Sum_probs=68.5
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceE-EEEcccccccC---CC-cccEEEEC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDID-FVQCDIRNLEW---RG-HVDTVVMN 120 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~-~~~~d~~~~~~---~~-~~D~i~~~ 120 (161)
..++.+|||+|||+|.++..+++.+..+|+|+|+++.|++.+.++.. ++. ....++..+.. .. .||+|+++
T Consensus 83 ~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~----rv~~~~~~ni~~l~~~~l~~~~fD~v~~d 158 (291)
T 3hp7_A 83 SVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD----RVRSMEQYNFRYAEPVDFTEGLPSFASID 158 (291)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT----TEEEECSCCGGGCCGGGCTTCCCSEEEEC
T ss_pred CccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc----ccceecccCceecchhhCCCCCCCEEEEE
Confidence 34678999999999999999999877799999999999987543211 222 22233333322 12 49999999
Q ss_pred CCCCCCCCCcchHHHHHHHhhcCCcEEEE
Q 031325 121 PPFGTRKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 121 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
..|... ...+..+.++|++++.++
T Consensus 159 ~sf~sl-----~~vL~e~~rvLkpGG~lv 182 (291)
T 3hp7_A 159 VSFISL-----NLILPALAKILVDGGQVV 182 (291)
T ss_dssp CSSSCG-----GGTHHHHHHHSCTTCEEE
T ss_pred eeHhhH-----HHHHHHHHHHcCcCCEEE
Confidence 988753 488999999998544443
No 255
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.42 E-value=1.5e-12 Score=92.56 Aligned_cols=91 Identities=14% Similarity=0.197 Sum_probs=73.2
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFG 124 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~ 124 (161)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.++++.. ++.+..+|+.+++... +||+|+++.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~fD~v~~~~~-- 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP----QVTFCVASSHRLPFSDTSMDAIIRIYA-- 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTSCSBCTTCEEEEEEESC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC----CcEEEEcchhhCCCCCCceeEEEEeCC--
Confidence 46789999999999999999986 34599999999999999988752 5789999998876554 8999998544
Q ss_pred CCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 125 TRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
...++++.+++++++.++.
T Consensus 158 -------~~~l~~~~~~L~pgG~l~~ 176 (269)
T 1p91_A 158 -------PCKAEELARVVKPGGWVIT 176 (269)
T ss_dssp -------CCCHHHHHHHEEEEEEEEE
T ss_pred -------hhhHHHHHHhcCCCcEEEE
Confidence 1457889999985554444
No 256
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.41 E-value=3.4e-12 Score=86.61 Aligned_cols=106 Identities=20% Similarity=0.273 Sum_probs=74.4
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC-
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW- 110 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~- 110 (161)
+.++.+.........++.+|||+|||+|.++..++++ ..+|+|+|+++.. .. ++.++++|+.+...
T Consensus 10 ~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 10 AFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIF 77 (191)
T ss_dssp HHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHH
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cCCCeEEEEccccCHHHH
Confidence 3344444433323456789999999999999999998 5599999999852 12 68999999987541
Q ss_pred -------C----CcccEEEECCCCCCCCC---------CcchHHHHHHHhhcCCcEEEEe
Q 031325 111 -------R----GHVDTVVMNPPFGTRKK---------GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 111 -------~----~~~D~i~~~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
. .+||+|++|++...... ......++.+.+.|++++.+++
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~ 137 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLL 137 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 1 27999999987543211 1123567778889986666655
No 257
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.41 E-value=4.2e-13 Score=93.73 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=66.5
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC----ceEEEEcccccccCCCcccEEEECC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL----DIDFVQCDIRNLEWRGHVDTVVMNP 121 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~~~~~D~i~~~~ 121 (161)
..++.+|||+|||+|.++..+++.+..+|+|+|+++.|++.++++..+... ++.+.. ..++.. ..+|.+.++.
T Consensus 35 ~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~d~~~~D~ 111 (232)
T 3opn_A 35 EINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAV--LADFEQ-GRPSFTSIDV 111 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCC--GGGCCS-CCCSEEEECC
T ss_pred CCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeC--HhHcCc-CCCCEEEEEE
Confidence 345679999999999999999998766999999999999987765433110 111111 111111 0257777777
Q ss_pred CCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 122 PFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 122 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.|... ..++..+.+++++++.++.
T Consensus 112 v~~~l-----~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 112 SFISL-----DLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp SSSCG-----GGTHHHHHHHSCTTCEEEE
T ss_pred EhhhH-----HHHHHHHHHhccCCCEEEE
Confidence 76543 4899999999986554443
No 258
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.39 E-value=5e-12 Score=86.02 Aligned_cols=93 Identities=14% Similarity=0.206 Sum_probs=69.1
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-C--CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccccccc-------------
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-G--ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE------------- 109 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------------- 109 (161)
.++.+|||+|||+|.++..++++ + ..+++|+|+++.. .. ++.+.++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~ 89 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNM 89 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC---------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccccccc
Confidence 46779999999999999999986 3 4699999999831 12 5889999998765
Q ss_pred ------------CC-CcccEEEECCCCCCCCC--Cc-------chHHHHHHHhhcCCcEEEEe
Q 031325 110 ------------WR-GHVDTVVMNPPFGTRKK--GV-------DMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 110 ------------~~-~~~D~i~~~~p~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~ 150 (161)
.. .+||+|++++++++... .. ...++..+.+.+++++.+++
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 23 38999999988765311 01 11367888999986666555
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.39 E-value=1.9e-12 Score=95.05 Aligned_cols=104 Identities=18% Similarity=0.145 Sum_probs=78.0
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC---C------ceEEEEcccccccC-----CCc
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE---L------DIDFVQCDIRNLEW-----RGH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~---~------~~~~~~~d~~~~~~-----~~~ 113 (161)
.+.+||++|||+|..+.++++++..+|+++|+|+.+++.|++++...+ + +++++.+|+.++.. ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 568999999999999999998866799999999999999999976321 1 58999999988654 238
Q ss_pred ccEEEECCCC---CCCCC-CcchHHHHHH----HhhcCCcEEEEec
Q 031325 114 VDTVVMNPPF---GTRKK-GVDMDFLSMA----LKVASQAVYSLHK 151 (161)
Q Consensus 114 ~D~i~~~~p~---~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~ 151 (161)
||+|+.|+|- ..... -...++++.+ .+.|++++.++.+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 9999999864 22111 1234777777 7888754444443
No 260
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.33 E-value=3.1e-12 Score=90.83 Aligned_cols=95 Identities=7% Similarity=-0.101 Sum_probs=76.6
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccccCCCcccEEEECC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEWRGHVDTVVMNP 121 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~~~~~D~i~~~~ 121 (161)
..+.+|||+|||+|..+..+++.+ .+++++|+++.+++.|++++... .-+++++.+|..+.. .+||+|+++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~ 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQ 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECC
Confidence 356799999999999999998876 79999999999999999876431 226899999998865 5799999985
Q ss_pred CCCCCCCCcchHHHHHHHhhcCCcEEEEec
Q 031325 122 PFGTRKKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 122 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+ . ...+++.+.+.|++++.++.+
T Consensus 148 ~----d---p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 148 E----P---DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp C----C---CHHHHHHHHTTEEEEEEEEEE
T ss_pred C----C---hHHHHHHHHHhcCCCcEEEEE
Confidence 4 1 224899999999865555554
No 261
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.33 E-value=3.7e-12 Score=93.86 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=79.3
Q ss_pred HHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCccc
Q 031325 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVD 115 (161)
Q Consensus 39 ~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D 115 (161)
.+...+...++.+|||+|||+|..+..+++. +..+++++|+ +.++. +++....+. +++++.+|+.+.. . .||
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~-p-~~D 249 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV-P-HAD 249 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC-C-CCS
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC-C-CCc
Confidence 3444445556789999999999999999886 4458999999 55544 333333333 6999999997432 2 799
Q ss_pred EEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 116 TVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 116 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|++...+++.......+.++++.+.+++++.++.
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i 284 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLV 284 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 99999999887666557999999999986555544
No 262
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.31 E-value=4.5e-13 Score=95.83 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=67.5
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHh---hcCCceEEE--EcccccccCCCcccEEEE
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAA---DLELDIDFV--QCDIRNLEWRGHVDTVVM 119 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~---~~~~~~~~~--~~d~~~~~~~~~~D~i~~ 119 (161)
...++.+|||+|||+|.++..++++ .+|+|+|+++ ++..+++... ..+.++.++ ++|+.+++ ..+||+|++
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~Vvs 154 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PFQADTVLC 154 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CCCCSEEEE
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CCCcCEEEE
Confidence 3456789999999999999999987 5999999998 5333222110 112267888 99998876 348999999
Q ss_pred CCCCCCC-CCC----cchHHHHHHHhhcCCcE
Q 031325 120 NPPFGTR-KKG----VDMDFLSMALKVASQAV 146 (161)
Q Consensus 120 ~~p~~~~-~~~----~~~~~~~~~~~~~~~~~ 146 (161)
+.. +.. ... ....++..+.+.|++++
T Consensus 155 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG 185 (276)
T 2wa2_A 155 DIG-ESNPTAAVEASRTLTVLNVISRWLEYNQ 185 (276)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHST
T ss_pred CCC-cCCCchhhhHHHHHHHHHHHHHHhccCC
Confidence 877 322 111 11247888888887544
No 263
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.31 E-value=5.7e-13 Score=94.76 Aligned_cols=102 Identities=18% Similarity=0.117 Sum_probs=69.3
Q ss_pred cCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHH---hhcCCceEEE--EcccccccCCCcccEEE
Q 031325 44 FGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENA---ADLELDIDFV--QCDIRNLEWRGHVDTVV 118 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~---~~~~~~~~~~--~~d~~~~~~~~~~D~i~ 118 (161)
....++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.. ...+.++.++ ++|+.+++ ..+||+|+
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~V~ 145 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP-VERTDVIM 145 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-CCCCSEEE
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC-CCCCcEEE
Confidence 34456789999999999999999987 5999999998 432221111 1112257888 89998876 34899999
Q ss_pred ECCCCCCCCC-Cc----chHHHHHHHhhcCCcE--EEEe
Q 031325 119 MNPPFGTRKK-GV----DMDFLSMALKVASQAV--YSLH 150 (161)
Q Consensus 119 ~~~p~~~~~~-~~----~~~~~~~~~~~~~~~~--~~~~ 150 (161)
++.. +.... .. ...++..+.+++++++ .+++
T Consensus 146 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 146 CDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 9877 33211 11 1237888888887544 4444
No 264
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.29 E-value=2.8e-11 Score=85.99 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=78.2
Q ss_pred CCeEEEecCCc--chHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccC-------CCccc-
Q 031325 49 NKVVADFGCGC--GTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-------RGHVD- 115 (161)
Q Consensus 49 ~~~vlD~g~G~--G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-------~~~~D- 115 (161)
..++||+|||+ +..+..+++. +..+|+++|.|+.|++.+++++...+. ++.++++|+.+... ...||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 36899999997 4455555543 456999999999999999999876543 68999999988531 12355
Q ss_pred ----EEEECCCCCCCCCCcc-hHHHHHHHhhcCCcEEEEec
Q 031325 116 ----TVVMNPPFGTRKKGVD-MDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 116 ----~i~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 151 (161)
.|+++..+|+...... ...+..+.+.++++.+++..
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls 199 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMS 199 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEE
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEE
Confidence 6889999999876553 58999999999866655543
No 265
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.28 E-value=3.5e-11 Score=81.39 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=68.5
Q ss_pred CCCCCeEEEecCCcchHHHHHHHc-CC---------CeEEEEeCChHHHHHHHHHHhhcCC-ceEEE-EcccccccC---
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLL-GA---------DQVIAIDIDSDSLELASENAADLEL-DIDFV-QCDIRNLEW--- 110 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~-~~---------~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~-~~d~~~~~~--- 110 (161)
..++.+|||+|||+|.++..+++. +. .+++|+|+++.+ .. ++.+. .+|+.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 346789999999999999999987 43 699999999842 12 57888 888876432
Q ss_pred -----C-CcccEEEECCCCCCCCCC-cc--------hHHHHHHHhhcCCcEEEEec
Q 031325 111 -----R-GHVDTVVMNPPFGTRKKG-VD--------MDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 111 -----~-~~~D~i~~~~p~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~ 151 (161)
. .+||+|+++++++..... .+ ...++.+.+.+++++.++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 1 279999998865432111 11 36788899999865555553
No 266
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.28 E-value=4.8e-11 Score=88.14 Aligned_cols=108 Identities=18% Similarity=0.175 Sum_probs=84.1
Q ss_pred HHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCCCcccEE
Q 031325 40 AENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTV 117 (161)
Q Consensus 40 ~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i 117 (161)
+...+......+|+|+|||+|..+..+++. +..+++..|+ |.+++.+++++...+. +++++.+|+.+.+.. .+|++
T Consensus 171 ~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~-~~D~~ 248 (353)
T 4a6d_A 171 VLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP-EADLY 248 (353)
T ss_dssp HHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC-CCSEE
T ss_pred HHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC-CceEE
Confidence 333334445679999999999999999986 4558888897 8999999998876555 899999999875443 68999
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEEE
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
++.-.+|..+.....+.++++.+.+++++.++
T Consensus 249 ~~~~vlh~~~d~~~~~iL~~~~~al~pgg~ll 280 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLERIYHTCKPGGGIL 280 (353)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHCCTTCEEE
T ss_pred EeeeecccCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 99888887776666789999999998544333
No 267
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.25 E-value=3.3e-11 Score=89.56 Aligned_cols=104 Identities=16% Similarity=0.090 Sum_probs=79.8
Q ss_pred HHHhhcC-CCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccE
Q 031325 39 TAENSFG-DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDT 116 (161)
Q Consensus 39 ~~~~~~~-~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~ 116 (161)
.+...+. ..++.+|||+|||+|..+..+++. +..+++++|+ +.+++.+++. -+++++.+|+.+ +.. .||+
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~~-~~D~ 270 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-SVP-QGDA 270 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCC-CEEE
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-CCC-CCCE
Confidence 3444443 345679999999999999999986 3458999999 9998876542 158999999987 333 3999
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|++...+++.........++++.+.+++++.++.
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i 304 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPNGKVII 304 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9999998877655556899999999986554443
No 268
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.25 E-value=3.4e-11 Score=82.69 Aligned_cols=83 Identities=28% Similarity=0.328 Sum_probs=67.3
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCCC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~~ 125 (161)
.++.+|||+|||+|.++..++ .+++|+|+++. ++.+..+|+.+++... +||+|+++..+++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~--------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL--------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS--------------STTEEESCTTSCSCCTTCEEEEEEESCCCS
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC--------------CceEEEeccccCCCCCCCEeEEEEehhccc
Confidence 456799999999999988773 49999999997 3678899998876544 8999999988863
Q ss_pred CCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 126 RKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.....+++.+.+.+++++.++.
T Consensus 128 ---~~~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 128 ---TNIRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp ---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred ---cCHHHHHHHHHHhCCCCeEEEE
Confidence 4456899999999986555554
No 269
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.25 E-value=3e-11 Score=89.71 Aligned_cols=103 Identities=10% Similarity=0.079 Sum_probs=78.8
Q ss_pred HHhhcC-CCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEE
Q 031325 40 AENSFG-DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTV 117 (161)
Q Consensus 40 ~~~~~~-~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i 117 (161)
+...+. ..+..+|||+|||+|..+..+++. +..+++++|+ +.+++.++++ -+++++.+|+.+ +.... |+|
T Consensus 194 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~p~~-D~v 265 (368)
T 3reo_A 194 ILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-GVPKG-DAI 265 (368)
T ss_dssp HHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCCCC-SEE
T ss_pred HHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-CCCCC-CEE
Confidence 344444 345679999999999999999885 4558999999 8888776532 269999999987 33224 999
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++...+|+.......+.++++.+.+++++.++.
T Consensus 266 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 298 (368)
T 3reo_A 266 FIKWICHDWSDEHCLKLLKNCYAALPDHGKVIV 298 (368)
T ss_dssp EEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 999998877666666899999999986554444
No 270
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.23 E-value=1.3e-11 Score=89.44 Aligned_cols=100 Identities=15% Similarity=0.109 Sum_probs=68.6
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeC----ChHHHHHHHHHHhhcCC-ceEEEEc-ccccccCCCcccEEEE
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDI----DSDSLELASENAADLEL-DIDFVQC-DIRNLEWRGHVDTVVM 119 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~----~~~~~~~a~~~~~~~~~-~~~~~~~-d~~~~~~~~~~D~i~~ 119 (161)
..++.+|||+|||+|.++..++++ .+|+|+|+ ++.+++... .+..+. ++.++++ |+..++. .+||+|++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~~-~~fD~V~s 154 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIPP-ERCDTLLC 154 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSCC-CCCSEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCCc-CCCCEEEE
Confidence 346789999999999999999987 48999999 554432111 111222 5889999 8887653 38999999
Q ss_pred CCCCCCCCC----CcchHHHHHHHhhcCCcEEEEe
Q 031325 120 NPPFGTRKK----GVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 120 ~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+.+++.... ......+..+.+.|++++.+++
T Consensus 155 d~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 155 DIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 987641111 1112578888899986555555
No 271
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.22 E-value=5.7e-11 Score=88.09 Aligned_cols=104 Identities=14% Similarity=0.069 Sum_probs=79.7
Q ss_pred HHHhhcC-CCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccE
Q 031325 39 TAENSFG-DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDT 116 (161)
Q Consensus 39 ~~~~~~~-~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~ 116 (161)
.+...+. ..+..+|||+|||+|..+..+++. +..+++++|+ +.+++.+++. -+++++.+|+.+ +.... |+
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-~~p~~-D~ 262 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-EVPSG-DT 262 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCCCC-SE
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-CCCCC-CE
Confidence 3444444 445679999999999999999875 4558999999 8888766532 269999999987 33334 99
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
|++...+|+.......+.++++.+.+++++.++.
T Consensus 263 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 296 (364)
T 3p9c_A 263 ILMKWILHDWSDQHCATLLKNCYDALPAHGKVVL 296 (364)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 9999998877666667899999999986555544
No 272
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.20 E-value=3.3e-11 Score=88.93 Aligned_cols=95 Identities=15% Similarity=0.137 Sum_probs=76.3
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
++.+|||+|||+|..+..+++. +..+++++|+ +.+++.+++. . +++++.+|+.+ +.. .||+|++...+++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~-~v~~~~~d~~~-~~p-~~D~v~~~~~lh~~ 259 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----N-NLTYVGGDMFT-SIP-NADAVLLKYILHNW 259 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----T-TEEEEECCTTT-CCC-CCSEEEEESCGGGS
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----C-CcEEEeccccC-CCC-CccEEEeehhhccC
Confidence 5679999999999999999976 4459999999 9999877642 1 58999999976 333 49999999998877
Q ss_pred CCCcchHHHHHHHhhcCC---cEEEEe
Q 031325 127 KKGVDMDFLSMALKVASQ---AVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~---~~~~~~ 150 (161)
......+.++++.+.+++ ++.++.
T Consensus 260 ~d~~~~~~l~~~~~~L~p~~~gG~l~i 286 (352)
T 1fp2_A 260 TDKDCLRILKKCKEAVTNDGKRGKVTI 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHSGGGCCCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 655555899999999987 665544
No 273
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.17 E-value=7.5e-11 Score=87.72 Aligned_cols=92 Identities=18% Similarity=0.136 Sum_probs=69.2
Q ss_pred CCCeEEEecCC------cchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-------C
Q 031325 48 SNKVVADFGCG------CGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G------~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-------~ 112 (161)
++.+|||+||| +|+.+..+++. +..+|+|+|+|+.+. . ..-+++++++|+.+++.. .
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~-~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------V-DELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------G-CBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------h-cCCCcEEEEecccccchhhhhhcccC
Confidence 56899999999 77777777653 456999999999972 1 122799999999986543 4
Q ss_pred cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 113 HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 113 ~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+||+|+++.. ++ .......++++.+.|++++++++
T Consensus 288 sFDlVisdgs-H~--~~d~~~aL~el~rvLKPGGvlVi 322 (419)
T 3sso_A 288 PFDIVIDDGS-HI--NAHVRTSFAALFPHVRPGGLYVI 322 (419)
T ss_dssp CEEEEEECSC-CC--HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CccEEEECCc-cc--chhHHHHHHHHHHhcCCCeEEEE
Confidence 8999999854 22 23455889999999996555555
No 274
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.14 E-value=5.4e-10 Score=80.27 Aligned_cols=92 Identities=15% Similarity=0.085 Sum_probs=64.5
Q ss_pred CCCCCCeEEEecCCc------chHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEE-EEcccccccCCCccc
Q 031325 45 GDVSNKVVADFGCGC------GTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDF-VQCDIRNLEWRGHVD 115 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~------G~~~~~la~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~d~~~~~~~~~~D 115 (161)
...++.+|||+|||+ |. ..+++. + ..+|+|+|+++. + . ++++ +++|+.+++...+||
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------~--~v~~~i~gD~~~~~~~~~fD 125 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------S--DADSTLIGDCATVHTANKWD 125 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------C--SSSEEEESCGGGCCCSSCEE
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------C--CCEEEEECccccCCccCccc
Confidence 445788999999944 66 334443 4 459999999998 1 1 5778 999999876555899
Q ss_pred EEEECCCCCCC-----C----CCcchHHHHHHHhhcCCcEEEEe
Q 031325 116 TVVMNPPFGTR-----K----KGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 116 ~i~~~~p~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+|++|++.+.. . ......+++.+.+.|++++.+++
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99998653321 1 11223788999999986665555
No 275
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.12 E-value=1.1e-09 Score=78.47 Aligned_cols=107 Identities=13% Similarity=0.114 Sum_probs=82.9
Q ss_pred CCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc--C----CceEEEEcccccccCCC--cccEE
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL--E----LDIDFVQCDIRNLEWRG--HVDTV 117 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~--~----~~~~~~~~d~~~~~~~~--~~D~i 117 (161)
..+++||-+|.|.|..+.++++. +..+++.+|+++..++.+++.+... + -+++++.+|...+.... +||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 35689999999999999999987 4679999999999999999987431 1 27999999999875543 89999
Q ss_pred EECCCC--CCCCCCcchHHHHHHHhhcCCcEEEEeccC
Q 031325 118 VMNPPF--GTRKKGVDMDFLSMALKVASQAVYSLHKTS 153 (161)
Q Consensus 118 ~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (161)
+.|.+= +....--..++++.+.+.|++.+.++.+.+
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 998652 222222345899999999986555555433
No 276
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.11 E-value=9.9e-11 Score=86.36 Aligned_cols=111 Identities=18% Similarity=0.185 Sum_probs=84.0
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC-------ceEEEEcccccccC--CCcc
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-------DIDFVQCDIRNLEW--RGHV 114 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-------~~~~~~~d~~~~~~--~~~~ 114 (161)
...++.+|||+|+|+|+-+..+++.+ ...+++.|+++..++.+++++++.+. ++.+...|...+.. ...|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 55688999999999999999998864 34899999999999999999987653 57888889887643 2389
Q ss_pred cEEEECCCCCCC-----CC-----------------CcchHHHHHHHhhcCC---cEEEEeccCcc
Q 031325 115 DTVVMNPPFGTR-----KK-----------------GVDMDFLSMALKVASQ---AVYSLHKTSTR 155 (161)
Q Consensus 115 D~i~~~~p~~~~-----~~-----------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 155 (161)
|.|++|+|+.-. .. ..+.+.+..+.+.+++ .+|+.|.-...
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 999999998531 00 1223557777777773 67777754433
No 277
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.11 E-value=1.5e-10 Score=85.57 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=75.9
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~~~ 126 (161)
...+|||+|||+|.++..+++. +..+++++|+ +.+++.+++. -+++++.+|+.+ +.. .||+|++..++++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~~-~~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-----ENLNFVGGDMFK-SIP-SADAVLLKWVLHDW 264 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-----SSEEEEECCTTT-CCC-CCSEEEEESCGGGS
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-----CCcEEEeCccCC-CCC-CceEEEEcccccCC
Confidence 4579999999999999999986 3458999999 7888766541 158999999987 333 59999999999877
Q ss_pred CCCcchHHHHHHHhhcCC---cEEEEe
Q 031325 127 KKGVDMDFLSMALKVASQ---AVYSLH 150 (161)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~---~~~~~~ 150 (161)
......+.++++.+.+++ ++.++.
T Consensus 265 ~d~~~~~~l~~~~~~L~p~~~gG~l~i 291 (358)
T 1zg3_A 265 NDEQSLKILKNSKEAISHKGKDGKVII 291 (358)
T ss_dssp CHHHHHHHHHHHHHHTGGGGGGCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 665556999999999987 655554
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.10 E-value=1.4e-10 Score=90.98 Aligned_cols=102 Identities=19% Similarity=0.137 Sum_probs=74.3
Q ss_pred CCCCeEEEecCCcchHHHH---HHHcCCC--eEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCCCcccEEEE
Q 031325 47 VSNKVVADFGCGCGTLGAA---ATLLGAD--QVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVM 119 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~---la~~~~~--~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~D~i~~ 119 (161)
....+|+|+|||+|.+... +++.+.. +|+++|.|+ +...+++..+.+++ .++++++|++++...+++|+|++
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVS 434 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVS 434 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEEC
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEE
Confidence 3456899999999988444 4443333 689999997 56678888888888 79999999999887779999998
Q ss_pred CCC-CCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 120 NPP-FGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 120 ~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
-.. +....+.. .+.+...-+.|++++.++.
T Consensus 435 EwMG~fLl~E~m-levL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 435 ELLGSFADNELS-PECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp CCCBTTBGGGCH-HHHHHHHGGGEEEEEEEES
T ss_pred EcCcccccccCC-HHHHHHHHHhcCCCcEEcc
Confidence 654 22223333 3677777777876655554
No 279
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.07 E-value=1.6e-08 Score=68.82 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=72.8
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC----ceEEEEcccccc---------------
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL----DIDFVQCDIRNL--------------- 108 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~~~~~d~~~~--------------- 108 (161)
...+|||+|| |+.++.+|+....+|+.+|.+++..+.++++++..|+ +++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4579999998 5788888875346999999999999999999999885 789999997542
Q ss_pred c--------CC--CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 109 E--------WR--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 109 ~--------~~--~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+ .. .+||+|+.|..+. ...+..+.+.+++++.++.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~-------~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFR-------VGCALATAFSITRPVTLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSH-------HHHHHHHHHHCSSCEEEEE
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCc-------hhHHHHHHHhcCCCeEEEE
Confidence 1 11 3799999987632 2666667788886555555
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=99.04 E-value=2.4e-09 Score=68.55 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHhhcCCCCCCeEEEecCCcc-hHHHHHHH-cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc
Q 031325 31 HIASRMLYTAENSFGDVSNKVVADFGCGCG-TLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (161)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vlD~g~G~G-~~~~~la~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 108 (161)
...+.+.+.+...+. .+.++||+|||+| ..+..|++ .+. .|+++|+++.+++ +++.|+++.
T Consensus 20 ~m~e~LaeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~--------------~v~dDiF~P 82 (153)
T 2k4m_A 20 HMWNDLAVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG--------------IVRDDITSP 82 (153)
T ss_dssp HHHHHHHHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT--------------EECCCSSSC
T ss_pred hHHHHHHHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc--------------eEEccCCCC
Confidence 445566666655432 4579999999999 69999997 666 8999999998776 888999886
Q ss_pred cCC--CcccEE-EECCCCCCCCCCcchHHHHHHHhh
Q 031325 109 EWR--GHVDTV-VMNPPFGTRKKGVDMDFLSMALKV 141 (161)
Q Consensus 109 ~~~--~~~D~i-~~~~p~~~~~~~~~~~~~~~~~~~ 141 (161)
... ..||+| -++|| .+.....++-+.++
T Consensus 83 ~~~~Y~~~DLIYsirPP-----~El~~~i~~lA~~v 113 (153)
T 2k4m_A 83 RMEIYRGAALIYSIRPP-----AEIHSSLMRVADAV 113 (153)
T ss_dssp CHHHHTTEEEEEEESCC-----TTTHHHHHHHHHHH
T ss_pred cccccCCcCEEEEcCCC-----HHHHHHHHHHHHHc
Confidence 553 389999 47888 34443444443333
No 281
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=99.02 E-value=1.3e-09 Score=77.41 Aligned_cols=85 Identities=18% Similarity=0.174 Sum_probs=68.2
Q ss_pred HHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----
Q 031325 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----- 111 (161)
Q Consensus 37 ~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----- 111 (161)
++.++..+...++..++|.+||.|+.+..+++. ..+|+|+|.|+.+++.+++ +.. + ++.+++++..++...
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~-~-rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL-P-GLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC-T-TEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc-C-CEEEEECCcchHHHHHHHcC
Confidence 334444445557889999999999999999998 4599999999999999998 654 3 799999999887431
Q ss_pred -CcccEEEECCCCCC
Q 031325 112 -GHVDTVVMNPPFGT 125 (161)
Q Consensus 112 -~~~D~i~~~~p~~~ 125 (161)
.++|.|++|+.++.
T Consensus 87 ~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 87 VERVDGILADLGVSS 101 (285)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCcCEEEeCCcccc
Confidence 26999999887643
No 282
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.01 E-value=5.3e-10 Score=74.49 Aligned_cols=87 Identities=9% Similarity=0.028 Sum_probs=69.5
Q ss_pred CCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC---CC-cccEEEEC
Q 031325 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---RG-HVDTVVMN 120 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~~-~~D~i~~~ 120 (161)
+..++.+|||+|||. +++|+++.|++.|+++... ++.+.++|+.+++. .. +||+|+++
T Consensus 9 g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp TCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEEEEC
Confidence 445789999999996 2389999999999988643 48999999998775 33 89999998
Q ss_pred CCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 121 PPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 121 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
..+++.. .....+++++.+.|+++++++.
T Consensus 71 ~~l~~~~-~~~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 71 LVPGSTT-LHSAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp CSTTCCC-CCCHHHHHHHHHHEEEEEEEEE
T ss_pred Chhhhcc-cCHHHHHHHHHHHCCCCEEEEE
Confidence 8888762 2336999999999996666555
No 283
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.99 E-value=6e-10 Score=79.11 Aligned_cols=100 Identities=6% Similarity=-0.010 Sum_probs=76.1
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc----CC-CcccEEEECCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE----WR-GHVDTVVMNPP 122 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~----~~-~~~D~i~~~~p 122 (161)
.+..+||+.+|||.+++++.+. ..+++.+|.++..++..++|++.. -++.+++.|..... +. ..||+|++|||
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~~-~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHFN-KKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCTT-SCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred cCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCcC-CcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 4667999999999999999885 479999999999999999998762 27899999976532 22 27999999999
Q ss_pred CCCCCCCcchHHHHHHH---hhcCCcEEEEec
Q 031325 123 FGTRKKGVDMDFLSMAL---KVASQAVYSLHK 151 (161)
Q Consensus 123 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 151 (161)
|... ....+.++.+. ..-+.++|+++-
T Consensus 169 Ye~k--~~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 169 YERK--EEYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp CCST--THHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCCC--cHHHHHHHHHHHhCccCCCeEEEEEE
Confidence 9842 23334444443 344478888874
No 284
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.75 E-value=3.4e-08 Score=69.80 Aligned_cols=102 Identities=18% Similarity=0.113 Sum_probs=69.9
Q ss_pred CCCeEEEecCCcchHHHHHHHc--------C-----CCeEEEEeCCh---H-----------HHHHHHHHHhhc------
Q 031325 48 SNKVVADFGCGCGTLGAAATLL--------G-----ADQVIAIDIDS---D-----------SLELASENAADL------ 94 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~--------~-----~~~v~~~D~~~---~-----------~~~~a~~~~~~~------ 94 (161)
++.+|||+|+|+|..+..+++. + ..+++++|..| + ..+.++++++.+
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999988776542 2 13899999887 3 334666666541
Q ss_pred --------C-CceEEEEcccccccCC--C----cccEEEECCCCCCCCC-C-cchHHHHHHHhhcCCcEEEEe
Q 031325 95 --------E-LDIDFVQCDIRNLEWR--G----HVDTVVMNPPFGTRKK-G-VDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 95 --------~-~~~~~~~~d~~~~~~~--~----~~D~i~~~~p~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 150 (161)
+ .++++..+|+.+.... . .||+|+.|+ |..... . -+.++++.+.+.+++++.++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 2 2678999999874222 1 699999986 322211 1 255899999999986666654
No 285
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.75 E-value=5e-08 Score=77.03 Aligned_cols=101 Identities=12% Similarity=0.133 Sum_probs=70.5
Q ss_pred CCeEEEecCCcchHHHHH---HH-cC----------CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccC--
Q 031325 49 NKVVADFGCGCGTLGAAA---TL-LG----------ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW-- 110 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~l---a~-~~----------~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-- 110 (161)
+..|+|+|||+|.+.... ++ .+ ..+|+++|.|+.++..++.... +++ .++++.+|+.++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 468999999999986432 22 11 2399999999988766655544 555 69999999999866
Q ss_pred ----CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 111 ----RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 111 ----~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
.++.|+|++-..=.....+...+.+..+-+.|++.+.++.
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 4589999996651111233445677777778876555544
No 286
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.75 E-value=6.2e-08 Score=69.88 Aligned_cols=58 Identities=24% Similarity=0.220 Sum_probs=47.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc
Q 031325 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL 94 (161)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~ 94 (161)
.++..+..... .++..|||++||+|..++.+++.+. +++|+|+++.+++.|++++...
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 33444444333 4788999999999999999999875 9999999999999999998764
No 287
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.71 E-value=7.6e-08 Score=70.83 Aligned_cols=116 Identities=14% Similarity=0.069 Sum_probs=83.1
Q ss_pred cccccCCCCChhHHHHHHHHHHhhc--CCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC
Q 031325 20 KVELEQYPTGPHIASRMLYTAENSF--GDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL 96 (161)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~ 96 (161)
+.....|..++.+.+++++.+...- ...++..|||+|+|.|.++..|++. ...+++++|+++..+...++.. .. -
T Consensus 28 k~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~-~ 105 (353)
T 1i4w_A 28 FFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG-S 105 (353)
T ss_dssp CGGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT-S
T ss_pred CCCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC-C
Confidence 4444567788899999888875331 1114589999999999999999985 3459999999999999988776 22 2
Q ss_pred ceEEEEccccccc-C----CC-c-----------c---cEEEECCCCCCCCCCcchHHHHHH
Q 031325 97 DIDFVQCDIRNLE-W----RG-H-----------V---DTVVMNPPFGTRKKGVDMDFLSMA 138 (161)
Q Consensus 97 ~~~~~~~d~~~~~-~----~~-~-----------~---D~i~~~~p~~~~~~~~~~~~~~~~ 138 (161)
+++++.+|+.+++ . .. . + =.|++|.||.. ......++++.+
T Consensus 106 ~l~ii~~D~l~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~vvaNLPYnI-stpil~~ll~~~ 166 (353)
T 1i4w_A 106 PLQILKRDPYDWSTYSNLIDEERIFVPEVQSSDHINDKFLTVANVTGEG-SEGLIMQWLSCI 166 (353)
T ss_dssp SCEEECSCTTCHHHHHHHTTTTCSSCCCCCCTTSEEEEEEEEEECCSTT-HHHHHHHHHHHH
T ss_pred CEEEEECCccchhhHHHhhcccccccccccccccCCCceEEEEECCCch-HHHHHHHHHHhc
Confidence 7999999997764 1 10 0 1 17899999965 334444555543
No 288
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=98.68 E-value=2.7e-07 Score=67.39 Aligned_cols=101 Identities=15% Similarity=0.098 Sum_probs=73.0
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC--cccEEEECCCCCC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG--HVDTVVMNPPFGT 125 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~--~~D~i~~~~p~~~ 125 (161)
.+.+++|++||.|+++..+.+.|...+.++|+++.+++..+.|..... ++|+.++.... .+|+++.+||+..
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~------~~Di~~~~~~~~~~~D~l~~gpPCQ~ 83 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP------EGDITQVNEKTIPDHDILCAGFPCQA 83 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC------BSCGGGSCGGGSCCCSEEEEECCCTT
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC------cCCHHHcCHhhCCCCCEEEECCCCCC
Confidence 346899999999999999998888889999999999999998875421 68888765433 7999999999866
Q ss_pred CCC--------CcchHHHHHHHh---hcCCcEEEEeccCc
Q 031325 126 RKK--------GVDMDFLSMALK---VASQAVYSLHKTST 154 (161)
Q Consensus 126 ~~~--------~~~~~~~~~~~~---~~~~~~~~~~~~~~ 154 (161)
.+. +.....+....+ ..++.++++.|...
T Consensus 84 fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~g 123 (327)
T 2c7p_A 84 FSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKN 123 (327)
T ss_dssp TCTTSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGG
T ss_pred cchhcccCCCcchhhHHHHHHHHHHHhccCcEEEEeCcHH
Confidence 521 111112333333 34567777776443
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.68 E-value=6.2e-08 Score=71.60 Aligned_cols=104 Identities=15% Similarity=0.056 Sum_probs=76.4
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc-----C----CceEEEEcccccccC----C-Cc
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-----E----LDIDFVQCDIRNLEW----R-GH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~----~~~~~~~~d~~~~~~----~-~~ 113 (161)
++++||-+|.|.|..+.++.+.+..+++.+|+++..++.+++.+... . -+++++.+|+..+.. . .+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 46799999999999999999876679999999999999999986431 1 147899999987542 2 27
Q ss_pred ccEEEECCCCCCC--------CCCcchHHHHHHHhhcCCcEEEEec
Q 031325 114 VDTVVMNPPFGTR--------KKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 114 ~D~i~~~~p~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
||+|+.|.+=... ..--..++++.+.+.|++.+.++.+
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 9999998542111 1111246788899999855555443
No 290
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.67 E-value=1.6e-08 Score=71.40 Aligned_cols=118 Identities=15% Similarity=0.056 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC
Q 031325 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW 110 (161)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 110 (161)
.+.++.+.... ....++.+|||+|||+|.++..+++. +...++|+|+.-.+...... ....+.++..+.+++.....
T Consensus 59 aA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~~g~~ii~~~~~~dv~~l 136 (277)
T 3evf_A 59 GTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQSLGWNIITFKDKTDIHRL 136 (277)
T ss_dssp HHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCBTTGGGEEEECSCCTTTS
T ss_pred HHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCcCCCCeEEEeccceehhc
Confidence 34455554444 45567789999999999999998875 56688888887443100000 01112245556665533333
Q ss_pred CC-cccEEEECCCCCCC----CCCcchHHHHHHHhhcCCc-EEEEec
Q 031325 111 RG-HVDTVVMNPPFGTR----KKGVDMDFLSMALKVASQA-VYSLHK 151 (161)
Q Consensus 111 ~~-~~D~i~~~~p~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (161)
.. .||+|++|...+.. +.......++.+.+.|+++ +.+++.
T Consensus 137 ~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 137 EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 33 89999998765411 1111223457777888766 555553
No 291
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.60 E-value=4.1e-07 Score=67.67 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=72.4
Q ss_pred CeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC---------CCcccEEEEC
Q 031325 50 KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---------RGHVDTVVMN 120 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---------~~~~D~i~~~ 120 (161)
.+++|++||.|+++..+.+.|...+.++|+++.+++..+.|.. +..++++|+.++.. ...+|+++..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP----RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT----TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC----CCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 4799999999999999998888788999999999998888764 35788899987642 1379999999
Q ss_pred CCCCCCCCC------c-chHHHHHHHhh---cCCcEEEEeccCc
Q 031325 121 PPFGTRKKG------V-DMDFLSMALKV---ASQAVYSLHKTST 154 (161)
Q Consensus 121 ~p~~~~~~~------~-~~~~~~~~~~~---~~~~~~~~~~~~~ 154 (161)
||+..++.. . ....+....++ +++.++++.|...
T Consensus 79 pPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~g 122 (376)
T 3g7u_A 79 PPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPG 122 (376)
T ss_dssp CCCCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTT
T ss_pred CCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchH
Confidence 997554211 0 11223333333 3567777766433
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.57 E-value=4e-07 Score=67.09 Aligned_cols=72 Identities=11% Similarity=0.031 Sum_probs=56.4
Q ss_pred CCCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCCC
Q 031325 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFG 124 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~~ 124 (161)
..+|.+++|+||++|+++..+++++. .|+++|+.+-. . .+...+ +++++++|.....+.. .+|+|+||....
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~-~----~l~~~~-~V~~~~~d~~~~~~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMA-Q----SLMDTG-QVTWLREDGFKFRPTRSNISWMVCDMVEK 281 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCC-H----HHHTTT-CEEEECSCTTTCCCCSSCEEEEEECCSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcC-h----hhccCC-CeEEEeCccccccCCCCCcCEEEEcCCCC
Confidence 34789999999999999999999875 99999976411 1 122222 6899999999887655 899999987753
No 293
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.55 E-value=3.2e-07 Score=64.89 Aligned_cols=48 Identities=29% Similarity=0.347 Sum_probs=42.7
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE 95 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~ 95 (161)
.++..|||++||+|..++++.+.+. +++|+|+++..++.++++++..+
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcc
Confidence 4788999999999999999998865 99999999999999999998655
No 294
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.54 E-value=3.6e-08 Score=69.69 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEc--ccccc
Q 031325 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQC--DIRNL 108 (161)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~--d~~~~ 108 (161)
.+.++.+... .....++.+|||+|||+|.++..+++. +...++|+|+...+...+.. ....+.++..... |+..+
T Consensus 75 AAfKL~ei~e-K~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv~~l 152 (282)
T 3gcz_A 75 GSAKLRWMEE-RGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDVFNM 152 (282)
T ss_dssp HHHHHHHHHH-TTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCGGGS
T ss_pred HHHHHHHHHH-hcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCCCceEEeeCCcchhhc
Confidence 3344444443 445667789999999999999998864 66689999997653221110 0111223333333 43333
Q ss_pred cCCCcccEEEECCCCCCC----CCCcchHHHHHHHhhcCCc--EEEEec
Q 031325 109 EWRGHVDTVVMNPPFGTR----KKGVDMDFLSMALKVASQA--VYSLHK 151 (161)
Q Consensus 109 ~~~~~~D~i~~~~p~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~ 151 (161)
.. ..+|+|++|...+.- +.......++-+...|+++ +.+++.
T Consensus 153 ~~-~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 153 EV-IPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CC-CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CC-CCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 22 389999998765521 1112223455566677655 555553
No 295
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.51 E-value=1.2e-07 Score=69.68 Aligned_cols=73 Identities=22% Similarity=0.266 Sum_probs=58.5
Q ss_pred CeEEEecCCcchHHHHHHHcC--CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC----cccEEEECCCC
Q 031325 50 KVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG----HVDTVVMNPPF 123 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~----~~D~i~~~~p~ 123 (161)
.+++|++||.|+++..+.+.| ...++++|+++.+++..+.|... ..++.+|+.++.... .+|+++.+||+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~----~~~~~~Di~~~~~~~~~~~~~D~l~~gpPC 78 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH----TQLLAKTIEGITLEEFDRLSFDMILMSPPC 78 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT----SCEECSCGGGCCHHHHHHHCCSEEEECCC-
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc----cccccCCHHHccHhHcCcCCcCEEEEcCCC
Confidence 479999999999999999887 45899999999999999998753 357789998875322 58999999996
Q ss_pred CCC
Q 031325 124 GTR 126 (161)
Q Consensus 124 ~~~ 126 (161)
..+
T Consensus 79 q~f 81 (343)
T 1g55_A 79 QPF 81 (343)
T ss_dssp ---
T ss_pred cch
Confidence 444
No 296
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.43 E-value=2.8e-06 Score=60.66 Aligned_cols=102 Identities=14% Similarity=0.046 Sum_probs=75.8
Q ss_pred CCCCeEEEecCCcchHHHHHHHc------CCCeEEEEeCChH--------------------------HHHHHHHHHhhc
Q 031325 47 VSNKVVADFGCGCGTLGAAATLL------GADQVIAIDIDSD--------------------------SLELASENAADL 94 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~------~~~~v~~~D~~~~--------------------------~~~~a~~~~~~~ 94 (161)
..+..|||+|+..|+.++.++.. ...+++++|..+. .++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34679999999999998888753 2458999996421 467789999998
Q ss_pred CC---ceEEEEcccccccCC---CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEecc
Q 031325 95 EL---DIDFVQCDIRNLEWR---GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 95 ~~---~~~~~~~d~~~~~~~---~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
|+ +++++.||+.+..+. .+||+|+.|.-. ..-....++.+...+++++++++..
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~----y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL----YESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS----HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc----cccHHHHHHHHHhhcCCCEEEEEcC
Confidence 86 699999999874332 279999997641 1223477888888888677766643
No 297
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=98.40 E-value=3.3e-06 Score=61.59 Aligned_cols=99 Identities=12% Similarity=0.174 Sum_probs=74.2
Q ss_pred eEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC--cccEEEECCCCCCCC-
Q 031325 51 VVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG--HVDTVVMNPPFGTRK- 127 (161)
Q Consensus 51 ~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~--~~D~i~~~~p~~~~~- 127 (161)
+++|+.||.|++...+.+.|...+.++|+++.+++.-+.|.. ..++.+|+.++.... ..|+++..||+..++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ 76 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-----AKLIKGDISKISSDEFPKCDGIIGGPPSQSWSE 76 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-----SEEEESCGGGCCGGGSCCCSEEECCCCGGGTEE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-----CCcccCChhhCCHhhCCcccEEEecCCCCCcCC
Confidence 699999999999999988888889999999999998887753 468899999876644 799999999975541
Q ss_pred -------CCcchHHHHHHHhh---cCCcEEEEeccCc
Q 031325 128 -------KGVDMDFLSMALKV---ASQAVYSLHKTST 154 (161)
Q Consensus 128 -------~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 154 (161)
.+.....+....++ .++.++++.|...
T Consensus 77 ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~g 113 (331)
T 3ubt_Y 77 GGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKG 113 (331)
T ss_dssp TTEECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCG
T ss_pred CCCccCCCCchhHHHHHHHHHHhccCCeEEEeeeecc
Confidence 11111344444444 4578888877543
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.38 E-value=7.3e-07 Score=64.81 Aligned_cols=87 Identities=17% Similarity=0.220 Sum_probs=68.0
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC--
Q 031325 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-- 110 (161)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-- 110 (161)
.+++.++..+...++..++|.+||.|+.+..+++. +..+|+|+|.++.+++.++ ++ .+-++++++++..++..
T Consensus 44 VLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~~~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 44 VLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--DDPRFSIIHGPFSALGEYV 120 (347)
T ss_dssp TTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--CCTTEEEEESCGGGHHHHH
T ss_pred ccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--cCCcEEEEeCCHHHHHHHH
Confidence 35566666666778899999999999999999886 3569999999999999984 43 22378999999877642
Q ss_pred --C---CcccEEEECCCCC
Q 031325 111 --R---GHVDTVVMNPPFG 124 (161)
Q Consensus 111 --~---~~~D~i~~~~p~~ 124 (161)
. .++|.|++|..++
T Consensus 121 ~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 121 AERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHTTCTTCEEEEEEECSCC
T ss_pred HhcCCCCcccEEEECCccC
Confidence 1 1589999986654
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.27 E-value=6e-07 Score=61.92 Aligned_cols=104 Identities=14% Similarity=0.090 Sum_probs=68.7
Q ss_pred HHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEc-ccccccCCCccc
Q 031325 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQC-DIRNLEWRGHVD 115 (161)
Q Consensus 39 ~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~-d~~~~~~~~~~D 115 (161)
.+.......++.+|+|+||++|+++...+.. +...|+|+|+-+.-.+.- ...+..|+ .++|..+ |+..++.. .+|
T Consensus 69 ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn~v~fk~gvDv~~~~~~-~~D 146 (267)
T 3p8z_A 69 WFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWNIVKLMSGKDVFYLPPE-KCD 146 (267)
T ss_dssp HHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTTSEEEECSCCGGGCCCC-CCS
T ss_pred HHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcCceEEEeccceeecCCc-ccc
Confidence 3444445567889999999999999987765 666899999875433110 01234566 6889999 98776653 699
Q ss_pred EEEECCCCCCC----CCCcchHHHHHHHhhcCC
Q 031325 116 TVVMNPPFGTR----KKGVDMDFLSMALKVASQ 144 (161)
Q Consensus 116 ~i~~~~p~~~~----~~~~~~~~~~~~~~~~~~ 144 (161)
.++||.-=... ......++|+.+.+.+++
T Consensus 147 tllcDIgeSs~~~~vE~~RtlrvLela~~wL~~ 179 (267)
T 3p8z_A 147 TLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN 179 (267)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS
T ss_pred EEEEecCCCCCChhhhhhHHHHHHHHHHHhccc
Confidence 99997431221 122234566666777764
No 300
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.23 E-value=1.1e-06 Score=62.52 Aligned_cols=116 Identities=16% Similarity=0.082 Sum_probs=66.8
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEc--cccccc
Q 031325 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQC--DIRNLE 109 (161)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~--d~~~~~ 109 (161)
+.++.+.... ....++.+|||+||++|+++..+++. +...|+|+|+...+...... ....+.++..... |+..+.
T Consensus 67 a~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~l~ 144 (300)
T 3eld_A 67 AAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFTMP 144 (300)
T ss_dssp HHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCCceEEeecCceeeecC
Confidence 3344444444 34457889999999999999999975 66689999997542110000 0011223333332 332222
Q ss_pred CCCcccEEEECCCCCCCC----CCcchHHHHHHHhhcCCc-EEEEec
Q 031325 110 WRGHVDTVVMNPPFGTRK----KGVDMDFLSMALKVASQA-VYSLHK 151 (161)
Q Consensus 110 ~~~~~D~i~~~~p~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (161)
...+|+|++|...+... .......++-+...|+++ +.+++.
T Consensus 145 -~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 145 -TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp -CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred -CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 12899999986654211 111234466667788766 666664
No 301
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=98.22 E-value=1.3e-05 Score=58.72 Aligned_cols=73 Identities=23% Similarity=0.352 Sum_probs=59.5
Q ss_pred CeEEEecCCcchHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC----cccEEEECCCC
Q 031325 50 KVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG----HVDTVVMNPPF 123 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~----~~D~i~~~~p~ 123 (161)
-+++|+.||.|++...+.+.|. ..+.++|+++.+++.-+.|... ..+..+|+.++.... .+|+++..||+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~----~~~~~~DI~~~~~~~~~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE----TNLLNRNIQQLTPQVIKKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT----SCEECCCGGGCCHHHHHHTTCCEEEECCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC----CceeccccccCCHHHhccCCCCEEEecCCC
Confidence 4799999999999999988765 5789999999999988888753 356788888875432 58999999997
Q ss_pred CCC
Q 031325 124 GTR 126 (161)
Q Consensus 124 ~~~ 126 (161)
...
T Consensus 80 Q~f 82 (333)
T 4h0n_A 80 QPF 82 (333)
T ss_dssp CCS
T ss_pred cch
Confidence 654
No 302
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=98.20 E-value=6.1e-07 Score=65.42 Aligned_cols=63 Identities=13% Similarity=0.100 Sum_probs=51.7
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW 110 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 110 (161)
.+++.|||+.||+|+.+.+..+.+. +.+|+|+++..++.+++++...+.....++.|+.++..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~i~~ 313 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRILN 313 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHHHHc
Confidence 4788999999999999999988865 99999999999999999998776554555555555443
No 303
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=98.18 E-value=7.3e-06 Score=58.97 Aligned_cols=75 Identities=19% Similarity=0.111 Sum_probs=60.4
Q ss_pred CCCeEEEecCCcchHHHHHHHcCCCe--EEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC-----cccEEEEC
Q 031325 48 SNKVVADFGCGCGTLGAAATLLGADQ--VIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-----HVDTVVMN 120 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~~~~~--v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-----~~D~i~~~ 120 (161)
...+++|+.||.|++...+.+.|... +.++|+++.+++..+.|.. ...+..+|+.++.... .+|+++..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~----~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ----GKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT----TCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC----CCceeCCChHHccHHHhcccCCcCEEEec
Confidence 45689999999999999998887655 7999999999988777753 2467889998875432 58999999
Q ss_pred CCCCCC
Q 031325 121 PPFGTR 126 (161)
Q Consensus 121 ~p~~~~ 126 (161)
||+..+
T Consensus 91 pPCQ~f 96 (295)
T 2qrv_A 91 SPCNDL 96 (295)
T ss_dssp CCCGGG
T ss_pred CCCccc
Confidence 997554
No 304
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.08 E-value=1e-05 Score=57.65 Aligned_cols=106 Identities=12% Similarity=0.045 Sum_probs=66.5
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEc-ccccccCC
Q 031325 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQC-DIRNLEWR 111 (161)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~-d~~~~~~~ 111 (161)
++... .......++.+|+|+||++|+++...+.. +...|+|+|+...-.+.- ...+..++ -+.+..+ |+..+++.
T Consensus 82 KL~ei-~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~l~~~ 159 (321)
T 3lkz_A 82 KLRWL-VERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFYRPSE 159 (321)
T ss_dssp HHHHH-HHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTSSCCC
T ss_pred HHHHH-HHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhhCCCC
Confidence 44333 33355667789999999999999987765 666899999876422100 00012233 3677777 88776663
Q ss_pred CcccEEEECCCCCCC----CCCcchHHHHHHHhhcC
Q 031325 112 GHVDTVVMNPPFGTR----KKGVDMDFLSMALKVAS 143 (161)
Q Consensus 112 ~~~D~i~~~~p~~~~----~~~~~~~~~~~~~~~~~ 143 (161)
.+|.|+||--=... ......++|+.+.+.++
T Consensus 160 -~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~ 194 (321)
T 3lkz_A 160 -CCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLH 194 (321)
T ss_dssp -CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhc
Confidence 69999998661111 12223456666667775
No 305
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=98.08 E-value=7.4e-06 Score=59.77 Aligned_cols=101 Identities=14% Similarity=0.173 Sum_probs=71.6
Q ss_pred CCeEEEecCCcchHHHHHHHcCC--CeE-EEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCC----cccEEEECC
Q 031325 49 NKVVADFGCGCGTLGAAATLLGA--DQV-IAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG----HVDTVVMNP 121 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~~~--~~v-~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~----~~D~i~~~~ 121 (161)
.-+++|++||.|++...+.+.|. ..+ .++|+++.+++..+.|... .+..+|+.++.... .+|+++..|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~~~~~DI~~~~~~~i~~~~~Dil~ggp 84 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----EVQVKNLDSISIKQIESLNCNTWFMSP 84 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----CCBCCCTTTCCHHHHHHTCCCEEEECC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----CcccCChhhcCHHHhccCCCCEEEecC
Confidence 35899999999999999988763 567 7999999999998888753 26678888775432 589999999
Q ss_pred CCCCC---------C-CCcchHHHHHHHh----hc--CCcEEEEeccCc
Q 031325 122 PFGTR---------K-KGVDMDFLSMALK----VA--SQAVYSLHKTST 154 (161)
Q Consensus 122 p~~~~---------~-~~~~~~~~~~~~~----~~--~~~~~~~~~~~~ 154 (161)
|+... . .+.....+....+ .+ ++.++++.|...
T Consensus 85 PCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~g 133 (327)
T 3qv2_A 85 PCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPL 133 (327)
T ss_dssp CCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGG
T ss_pred CccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhh
Confidence 96554 1 1111133444444 33 467777776543
No 306
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.95 E-value=2.7e-05 Score=56.64 Aligned_cols=48 Identities=21% Similarity=0.172 Sum_probs=40.7
Q ss_pred CCCCeEEEecCCcchHHHHHHHcCCCeEEEEeCCh---HHHHHHHHHHhhcC
Q 031325 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS---DSLELASENAADLE 95 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~---~~~~~a~~~~~~~~ 95 (161)
.+++.|||+.||+|..+++..+.+. +.+|+|+++ ..++.+++++.+.+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4788999999999999999998865 999999999 99999999987654
No 307
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.91 E-value=1.9e-05 Score=60.48 Aligned_cols=76 Identities=14% Similarity=0.137 Sum_probs=59.7
Q ss_pred CeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC------------------
Q 031325 50 KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR------------------ 111 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~------------------ 111 (161)
-+++|++||.|++...+.+.|...+.++|+++.+++.-+.|..... ...++.+|+.++...
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p-~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~ 167 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDP-ATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHI 167 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCT-TTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHS
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCC-CcceeccchhhhhhccccccchhhHHhhhhhcC
Confidence 4799999999999999988887789999999999988887763211 345677888776421
Q ss_pred CcccEEEECCCCCCC
Q 031325 112 GHVDTVVMNPPFGTR 126 (161)
Q Consensus 112 ~~~D~i~~~~p~~~~ 126 (161)
..+|+++..||+..+
T Consensus 168 ~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 168 PEHDVLLAGFPCQPF 182 (482)
T ss_dssp CCCSEEEEECCCCCC
T ss_pred CCCCEEEecCCCcch
Confidence 268999999997654
No 308
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.89 E-value=1.6e-05 Score=55.58 Aligned_cols=114 Identities=12% Similarity=0.058 Sum_probs=62.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCc-eEEEEc-ccccccC
Q 031325 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELD-IDFVQC-DIRNLEW 110 (161)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~-~~~~~~-d~~~~~~ 110 (161)
.++.+ +.+..-..++.+|+|+||++|+++..+++. +...|.|.++.... ...-......|++ +.+.++ |+.++..
T Consensus 60 yKL~E-IdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~Df~~~~~ 137 (269)
T 2px2_A 60 AKLRW-LVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVDVFYKPS 137 (269)
T ss_dssp HHHHH-HHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCCGGGSCC
T ss_pred HHHHH-HHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcccCCCceEEEeeccCCccCCCC
Confidence 34433 334445567889999999999999999986 23344455544331 0000000002322 245557 9988542
Q ss_pred CCcccEEEECCCCCCCC----CCcchHHHHHHHhhcCCcE-EEEe
Q 031325 111 RGHVDTVVMNPPFGTRK----KGVDMDFLSMALKVASQAV-YSLH 150 (161)
Q Consensus 111 ~~~~D~i~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~ 150 (161)
..+|+|++|..=.... .......++-+.+.|++++ .+++
T Consensus 138 -~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 138 -EISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp -CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred -CCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 2799999974322211 1112234556667777555 4444
No 309
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.83 E-value=0.00048 Score=51.13 Aligned_cols=79 Identities=14% Similarity=0.013 Sum_probs=48.0
Q ss_pred CCeEEEecCCcchHHHHHHH--------c--------CCCeEEEEeCChHHHHHHHHHHhhcC-------------CceE
Q 031325 49 NKVVADFGCGCGTLGAAATL--------L--------GADQVIAIDIDSDSLELASENAADLE-------------LDID 99 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~--------~--------~~~~v~~~D~~~~~~~~a~~~~~~~~-------------~~~~ 99 (161)
..+|+|+|||+|..+..+.. . +.-+|+..|+-.......=+.+.... .+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 46899999999998888732 1 22378888877666544433333210 0111
Q ss_pred EE---Eccccc-ccCCCcccEEEECCCCCCCC
Q 031325 100 FV---QCDIRN-LEWRGHVDTVVMNPPFGTRK 127 (161)
Q Consensus 100 ~~---~~d~~~-~~~~~~~D~i~~~~p~~~~~ 127 (161)
+. .+.... +.+..++|+|+++..+||..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls 164 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLS 164 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeec
Confidence 22 222222 22233999999999999985
No 310
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=97.30 E-value=0.00079 Score=55.78 Aligned_cols=74 Identities=22% Similarity=0.246 Sum_probs=56.4
Q ss_pred CCeEEEecCCcchHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc-----------------cC
Q 031325 49 NKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL-----------------EW 110 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-----------------~~ 110 (161)
.-+++|+.||.|+++..+.+.|. ..+.++|+++.+++.-+.|... ..++.+|+.++ +.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~----~~~~~~DI~~l~~~~~~~di~~~~~~~lp~ 615 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPG----STVFTEDCNILLKLVMAGETTNSRGQRLPQ 615 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTT----SEEECSCHHHHHHHHHHTCSBCTTCCBCCC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC----CccccccHHHHhhhccchhhhhhhhhhccc
Confidence 34899999999999999988776 6889999999999988777542 45666665332 11
Q ss_pred CCcccEEEECCCCCCC
Q 031325 111 RGHVDTVVMNPPFGTR 126 (161)
Q Consensus 111 ~~~~D~i~~~~p~~~~ 126 (161)
...+|+++..||...+
T Consensus 616 ~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 616 KGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp TTTCSEEEECCCCTTC
T ss_pred CCCeeEEEEcCCCcch
Confidence 1268999999996554
No 311
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=97.24 E-value=0.003 Score=51.23 Aligned_cols=44 Identities=20% Similarity=0.284 Sum_probs=36.5
Q ss_pred CCeEEEecCCcchHHHHHHHcC------CCeEEEEeCChHHHHHHHHHHh
Q 031325 49 NKVVADFGCGCGTLGAAATLLG------ADQVIAIDIDSDSLELASENAA 92 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~~------~~~v~~~D~~~~~~~~a~~~~~ 92 (161)
..+++|+.||.|+++.-+.+.| ...+.++|+++.+++.-+.|..
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 3479999999999888876654 4588999999999998888753
No 312
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.19 E-value=0.0029 Score=47.04 Aligned_cols=78 Identities=9% Similarity=0.008 Sum_probs=47.7
Q ss_pred CCeEEEecCCcchHHHHHHHc------------------CCCeEEEEeCC-----------hHHHHHHHHHHhhcCCceE
Q 031325 49 NKVVADFGCGCGTLGAAATLL------------------GADQVIAIDID-----------SDSLELASENAADLELDID 99 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~------------------~~~~v~~~D~~-----------~~~~~~a~~~~~~~~~~~~ 99 (161)
..+|+|+||++|..+..+... +.-+|+..|+- +...+.+++.... ..+..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~-~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR-KIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC-CTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC-CCCce
Confidence 468999999999988877643 11277888876 3333332221110 11234
Q ss_pred EEEcccccc---cC-CCcccEEEECCCCCCCC
Q 031325 100 FVQCDIRNL---EW-RGHVDTVVMNPPFGTRK 127 (161)
Q Consensus 100 ~~~~d~~~~---~~-~~~~D~i~~~~p~~~~~ 127 (161)
++.+....+ .+ ..++|+|+++..+||..
T Consensus 132 f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls 163 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEESMHFLHSCYCLHWLS 163 (384)
T ss_dssp EEEECCSCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred EEEecchhhhhccCCCCceEEEEecceeeecC
Confidence 555543332 22 33999999999999974
No 313
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=97.17 E-value=0.00088 Score=50.21 Aligned_cols=45 Identities=11% Similarity=-0.074 Sum_probs=37.4
Q ss_pred CCeEEEecCCcchHHHHHHHcC--CCe----EEEEeCChHHHHHHHHHHhh
Q 031325 49 NKVVADFGCGCGTLGAAATLLG--ADQ----VIAIDIDSDSLELASENAAD 93 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~~--~~~----v~~~D~~~~~~~~a~~~~~~ 93 (161)
.-+++|++||.|++...+.+.| ... +.++|+++.+++.-+.+...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 3589999999999999987765 334 89999999999988887754
No 314
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.08 E-value=0.0028 Score=47.56 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=41.3
Q ss_pred CCCCeEEEecCCcchHHHHHH-Hc-C-CCeEEEEeCChHHHHHHHHHHhh
Q 031325 47 VSNKVVADFGCGCGTLGAAAT-LL-G-ADQVIAIDIDSDSLELASENAAD 93 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la-~~-~-~~~v~~~D~~~~~~~~a~~~~~~ 93 (161)
.++.+++|+||+.|..+..++ +. + ..+|+++|.+|...+..+++++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 577899999999999999987 43 3 36999999999999999999886
No 315
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=96.87 E-value=0.0041 Score=53.04 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=55.7
Q ss_pred CCeEEEecCCcchHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc-----------------cC
Q 031325 49 NKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL-----------------EW 110 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-----------------~~ 110 (161)
..+++|+.||.|+++..+.+.|. ..+.++|+++.+++.-+.|... ..++.+|+.++ +.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~----~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~ 926 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPG----TTVFTEDCNVLLKLVMAGEVTNSLGQRLPQ 926 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTT----SEEECSCHHHHHHHHTTTCSBCSSCCBCCC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC----CcEeeccHHHHhHhhhccchhhhhhhhccc
Confidence 45899999999999999988775 5789999999999988777532 34555554321 11
Q ss_pred CCcccEEEECCCCCCC
Q 031325 111 RGHVDTVVMNPPFGTR 126 (161)
Q Consensus 111 ~~~~D~i~~~~p~~~~ 126 (161)
...+|+++..||+..+
T Consensus 927 ~~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 927 KGDVEMLCGGPPCQGF 942 (1330)
T ss_dssp TTTCSEEEECCCCTTT
T ss_pred cCccceEEecCCCccc
Confidence 1258999999997665
No 316
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.73 E-value=0.0036 Score=46.16 Aligned_cols=80 Identities=13% Similarity=0.126 Sum_probs=52.6
Q ss_pred CCeEEEecCCcchHHHHHHHc-----------------CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEc---ccc
Q 031325 49 NKVVADFGCGCGTLGAAATLL-----------------GADQVIAIDIDSDSLELASENAADLEL--DIDFVQC---DIR 106 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~-----------------~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~---d~~ 106 (161)
..+|+|+||++|..+..+... +.-+|+..|+-.+....+-+.+....- +..+..+ ...
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 458999999999877665432 123889999988888877666543110 1234333 333
Q ss_pred cccC-CCcccEEEECCCCCCCCC
Q 031325 107 NLEW-RGHVDTVVMNPPFGTRKK 128 (161)
Q Consensus 107 ~~~~-~~~~D~i~~~~p~~~~~~ 128 (161)
.-.. ..++|+|+++..+||...
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~ 154 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQ 154 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSS
T ss_pred hccCCCCceEEEEehhhhhhccc
Confidence 3222 339999999999999743
No 317
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.72 E-value=0.023 Score=40.72 Aligned_cols=105 Identities=12% Similarity=0.035 Sum_probs=63.2
Q ss_pred HHHHHHHHh-hcCCCCCCeEEEecC------CcchHHHHHHHcC-C-CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcc
Q 031325 34 SRMLYTAEN-SFGDVSNKVVADFGC------GCGTLGAAATLLG-A-DQVIAIDIDSDSLELASENAADLELDIDFVQCD 104 (161)
Q Consensus 34 ~~~~~~~~~-~~~~~~~~~vlD~g~------G~G~~~~~la~~~-~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d 104 (161)
.++...+.. ....+.+.+|||+|+ -+|+. .+.+.+ . ..++++|+++-.. ..+ .++++|
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s----------da~-~~IqGD 160 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS----------DAD-STLIGD 160 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC----------SSS-EEEESC
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc----------CCC-eEEEcc
Confidence 355555533 234456889999996 56763 333332 2 3999999987331 112 559999
Q ss_pred cccccCCCcccEEEECCCC---CCCCC------CcchHHHHHHHhhcCCcEEEEec
Q 031325 105 IRNLEWRGHVDTVVMNPPF---GTRKK------GVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 105 ~~~~~~~~~~D~i~~~~p~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+.......+||+|++|..= ++... ..-...++-+.+.|++++.+++.
T Consensus 161 ~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 161 CATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp GGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 8776655689999997432 22111 11223455556667766666663
No 318
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.08 E-value=0.011 Score=37.36 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=43.8
Q ss_pred CeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC---CC--cccEEEEC
Q 031325 50 KVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---RG--HVDTVVMN 120 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~~--~~D~i~~~ 120 (161)
.+++=+|||. ++..++ +.+. .|+++|.+++.++.++. .+ +.++.+|..+... .. .+|++++.
T Consensus 8 ~~viIiG~G~--~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~g--~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 8 NHALLVGYGR--VGSLLGEKLLASDI-PLVVIETSRTRVDELRE----RG--VRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp SCEEEECCSH--HHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT--CEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCEEEECcCH--HHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----cC--CCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 4788888764 444433 3455 99999999998887654 23 6788899876432 11 78999875
Q ss_pred CC
Q 031325 121 PP 122 (161)
Q Consensus 121 ~p 122 (161)
.|
T Consensus 79 ~~ 80 (140)
T 3fwz_A 79 IP 80 (140)
T ss_dssp CS
T ss_pred CC
Confidence 55
No 319
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.93 E-value=0.13 Score=38.38 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=47.1
Q ss_pred cCCCCChhHHHHHHHHH----Hh---hcCCCCCCeEEEecCCcchHHHHHHHc--------CCCeEEEEeCChHHHHHHH
Q 031325 24 EQYPTGPHIASRMLYTA----EN---SFGDVSNKVVADFGCGCGTLGAAATLL--------GADQVIAIDIDSDSLELAS 88 (161)
Q Consensus 24 ~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~vlD~g~G~G~~~~~la~~--------~~~~v~~~D~~~~~~~~a~ 88 (161)
+.|.|.++++...-+.+ .. ..+...+-.|+|+|+|+|.+...+.+. ...+++.+|+|+...+.-+
T Consensus 49 GDF~Tapeis~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~ 128 (387)
T 1zkd_A 49 GDFTTSPEISQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQ 128 (387)
T ss_dssp --CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHH
T ss_pred CCeeCCCchHHHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHH
Confidence 45667777654332222 21 223334457999999999987776531 2238999999999988766
Q ss_pred HHHhhcCCceEE
Q 031325 89 ENAADLELDIDF 100 (161)
Q Consensus 89 ~~~~~~~~~~~~ 100 (161)
+.+...+ ++.+
T Consensus 129 ~~L~~~~-~v~W 139 (387)
T 1zkd_A 129 TLLAGIR-NIHW 139 (387)
T ss_dssp HHSTTCS-SEEE
T ss_pred HHhcCCC-CeEE
Confidence 6665433 3444
No 320
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.74 E-value=0.08 Score=37.07 Aligned_cols=74 Identities=22% Similarity=0.284 Sum_probs=56.7
Q ss_pred CCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------Cc
Q 031325 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~~ 113 (161)
+++++|--|++.|. ++..+++.|. +|+.+|.+++.++.+.+.++..+.++.++.+|+.+...- ..
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 67888888877763 4444555565 899999999999988888888777889999999875431 26
Q ss_pred ccEEEECCC
Q 031325 114 VDTVVMNPP 122 (161)
Q Consensus 114 ~D~i~~~~p 122 (161)
.|+++.|.-
T Consensus 85 iDiLVNNAG 93 (254)
T 4fn4_A 85 IDVLCNNAG 93 (254)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 899998753
No 321
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.73 E-value=0.048 Score=39.30 Aligned_cols=104 Identities=20% Similarity=0.211 Sum_probs=59.9
Q ss_pred CCCeEEEecCCcchHHHHHHH----c-CC--CeEEEEeCCh--------H-HHHHHHHHHhhc-----C-CceEEEEccc
Q 031325 48 SNKVVADFGCGCGTLGAAATL----L-GA--DQVIAIDIDS--------D-SLELASENAADL-----E-LDIDFVQCDI 105 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~-~~--~~v~~~D~~~--------~-~~~~a~~~~~~~-----~-~~~~~~~~d~ 105 (161)
+.-+|+|+|-|+|.......+ . +. -+++.+|..+ . .-+......... + +..++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 345899999999986544321 1 22 2566777532 1 122222222221 1 1467889999
Q ss_pred ccccC--CC-cccEEEECCCCCCCC--CCcchHHHHHHHhhcCCcEEEEecc
Q 031325 106 RNLEW--RG-HVDTVVMNPPFGTRK--KGVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 106 ~~~~~--~~-~~D~i~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
.+... .. .+|+++.|+ |.... .-=..++++.+.+.+++++.++..+
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSYS 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEEe
Confidence 77433 22 799999986 33321 1122378889999988665555433
No 322
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.71 E-value=0.034 Score=34.84 Aligned_cols=65 Identities=20% Similarity=0.268 Sum_probs=44.8
Q ss_pred CCeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC-----CCcccEEEE
Q 031325 49 NKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----RGHVDTVVM 119 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-----~~~~D~i~~ 119 (161)
..+++=+|+| .++..+++ .|. +|+++|.+++.++.++. .+ ..++.+|..+... ...+|+++.
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~----~~--~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGK-KVLAVDKSKEKIELLED----EG--FDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT--CEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH----CC--CcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 4578888885 45555443 455 99999999988776654 22 5778888876432 126899998
Q ss_pred CCC
Q 031325 120 NPP 122 (161)
Q Consensus 120 ~~p 122 (161)
..|
T Consensus 77 ~~~ 79 (141)
T 3llv_A 77 TGS 79 (141)
T ss_dssp CCS
T ss_pred ecC
Confidence 666
No 323
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.67 E-value=0.32 Score=35.44 Aligned_cols=100 Identities=14% Similarity=0.194 Sum_probs=71.8
Q ss_pred CCCeEEEecCCcchHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcC----------------------CceEEEEcc
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLE----------------------LDIDFVQCD 104 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~----------------------~~~~~~~~d 104 (161)
+...|+.+|||.......+... +...++-+|. |..++.-++.+...+ -+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4568999999999988888764 3336666666 888887777766541 257888899
Q ss_pred cccccC---------C-CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEE
Q 031325 105 IRNLEW---------R-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 105 ~~~~~~---------~-~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (161)
+.+..+ . ....++++--.+..+........++.+....+++.++
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~~~~~v 229 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWI 229 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCCCcEEE
Confidence 887432 1 1467788877777777777778888888877754443
No 324
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.57 E-value=0.091 Score=36.80 Aligned_cols=76 Identities=22% Similarity=0.209 Sum_probs=56.1
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC-----------CC
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----------RG 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-----------~~ 112 (161)
.+++++|--|++.|. ++..+++.|. +|+..|.+++.++.+.+.+...+.++..+.+|+.+... ..
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 367788877777662 4444555566 99999999999888888887777788889999877532 12
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 86 ~iDiLVNNAG~ 96 (255)
T 4g81_D 86 HVDILINNAGI 96 (255)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 68999987543
No 325
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.55 E-value=0.29 Score=34.04 Aligned_cols=74 Identities=26% Similarity=0.260 Sum_probs=54.3
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
..++++|=.|++.|. ++..+++.|. +|+.++.++..++.+.+.+...+.++.++.+|+.+...- .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 367788888876662 4444555565 899999999888887777776666788999999875421 1
Q ss_pred cccEEEECC
Q 031325 113 HVDTVVMNP 121 (161)
Q Consensus 113 ~~D~i~~~~ 121 (161)
..|+++.|.
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 579999876
No 326
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.52 E-value=0.018 Score=41.80 Aligned_cols=54 Identities=19% Similarity=0.174 Sum_probs=36.5
Q ss_pred ceEEEEcccccc-cC--CCcccEEEECCCCCCCCCC------------cchHHHHHHHhhcCCcEEEEe
Q 031325 97 DIDFVQCDIRNL-EW--RGHVDTVVMNPPFGTRKKG------------VDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 97 ~~~~~~~d~~~~-~~--~~~~D~i~~~~p~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 150 (161)
...++++|+.+. .. ..++|+|++||||...... ....++..+.++|++.+.+..
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i 82 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVV 82 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEE
Confidence 468899998763 21 2389999999999764211 234677888888884443333
No 327
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.49 E-value=0.018 Score=41.19 Aligned_cols=52 Identities=17% Similarity=0.060 Sum_probs=34.5
Q ss_pred ceEEEEcccccccC--C-CcccEEEECCCCCCCCCC------------------cchHHHHHHHhhcCCcEEE
Q 031325 97 DIDFVQCDIRNLEW--R-GHVDTVVMNPPFGTRKKG------------------VDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 97 ~~~~~~~d~~~~~~--~-~~~D~i~~~~p~~~~~~~------------------~~~~~~~~~~~~~~~~~~~ 148 (161)
++.++++|+.+... . .+||+|++||||.....- ....++..+.++|++.+.+
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 56899999988422 2 389999999999643110 0124567888888754443
No 328
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.34 E-value=0.31 Score=34.68 Aligned_cols=77 Identities=26% Similarity=0.346 Sum_probs=55.4
Q ss_pred CCCCeEEEecCCcc---hHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 47 VSNKVVADFGCGCG---TLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G---~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
..++++|=.|++.| .++..+++.|. +|+.++.++..++.+.+.+...+.++.++..|+.+...- .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 36678887777655 23344445565 899999999988888777776666789999999875421 1
Q ss_pred cccEEEECCCCC
Q 031325 113 HVDTVVMNPPFG 124 (161)
Q Consensus 113 ~~D~i~~~~p~~ 124 (161)
..|+++.|.-..
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 579999886543
No 329
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=95.11 E-value=0.4 Score=33.19 Aligned_cols=75 Identities=19% Similarity=0.286 Sum_probs=53.0
Q ss_pred CCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------Cc
Q 031325 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~~ 113 (161)
.++++|=.|++.|. ++..+++.|. +|+.++.++...+...+.+...+.++.++.+|+.+...- ..
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56677777766552 3334445566 899999999888877777776666788999999875421 15
Q ss_pred ccEEEECCCC
Q 031325 114 VDTVVMNPPF 123 (161)
Q Consensus 114 ~D~i~~~~p~ 123 (161)
.|+++.|.-.
T Consensus 90 id~lv~nAg~ 99 (256)
T 3gaf_A 90 ITVLVNNAGG 99 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999987654
No 330
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.10 E-value=0.43 Score=33.42 Aligned_cols=77 Identities=29% Similarity=0.272 Sum_probs=51.7
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccccCC
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEWR 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 111 (161)
..++++|=.|++.|. ++..+++.|. +|+.+|.+ ...++.+...+...+.++.++.+|+.+...-
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 356778877766552 3334445565 89999987 6666666666666565788999999875321
Q ss_pred -----------CcccEEEECCCCC
Q 031325 112 -----------GHVDTVVMNPPFG 124 (161)
Q Consensus 112 -----------~~~D~i~~~~p~~ 124 (161)
...|+++.|.-..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcC
Confidence 1579999886543
No 331
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.02 E-value=0.075 Score=42.48 Aligned_cols=104 Identities=11% Similarity=-0.005 Sum_probs=62.8
Q ss_pred CCCeEEEecCCcchHHHHHHHc-----------C--CCeEEEEeCChHHHHHHHH--------------HHhhc-----C
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-----------G--ADQVIAIDIDSDSLELASE--------------NAADL-----E 95 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-----------~--~~~v~~~D~~~~~~~~a~~--------------~~~~~-----~ 95 (161)
+.-+|+|+|.|+|...+.+.+. . .-+++.+|..|-..+.+++ .+..+ |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 3458999999999877776542 1 1379999995533333332 22221 1
Q ss_pred ----------CceEEEEcccccccCC------CcccEEEECCCCCCC-CCCcchHHHHHHHhhcCCcEEEEec
Q 031325 96 ----------LDIDFVQCDIRNLEWR------GHVDTVVMNPPFGTR-KKGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 96 ----------~~~~~~~~d~~~~~~~------~~~D~i~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+.+++..||+.+.... ..+|+++.|+.-... ...=..+++..+.+.++++..+...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 2467888998764331 279999998742211 1222347788888888755544443
No 332
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.88 E-value=0.085 Score=35.71 Aligned_cols=64 Identities=20% Similarity=0.130 Sum_probs=42.6
Q ss_pred eEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC---C--CcccEEEECC
Q 031325 51 VVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---R--GHVDTVVMNP 121 (161)
Q Consensus 51 ~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~--~~~D~i~~~~ 121 (161)
+|+=+|+ |.++..+++ .+. .++++|.+++.++...+.. ...++.+|..+... . ..+|++++..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 3455554 666666654 344 9999999998887654322 36789999876432 1 2789999865
Q ss_pred C
Q 031325 122 P 122 (161)
Q Consensus 122 p 122 (161)
+
T Consensus 74 ~ 74 (218)
T 3l4b_C 74 P 74 (218)
T ss_dssp S
T ss_pred C
Confidence 5
No 333
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.83 E-value=0.61 Score=32.30 Aligned_cols=77 Identities=32% Similarity=0.452 Sum_probs=54.3
Q ss_pred CCCCeEEEecC-Ccch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC----------
Q 031325 47 VSNKVVADFGC-GCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~-G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~---------- 111 (161)
..++++|=.|+ |.|. ++..+++.|. +|+.++.++..++.....+...+- ++.++.+|+.+...-
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 35678888887 5552 4445566665 899999999888877777655443 789999999875321
Q ss_pred -CcccEEEECCCCC
Q 031325 112 -GHVDTVVMNPPFG 124 (161)
Q Consensus 112 -~~~D~i~~~~p~~ 124 (161)
...|+++.+.-..
T Consensus 99 ~g~id~li~~Ag~~ 112 (266)
T 3o38_A 99 AGRLDVLVNNAGLG 112 (266)
T ss_dssp HSCCCEEEECCCCC
T ss_pred hCCCcEEEECCCcC
Confidence 1579999886643
No 334
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.66 E-value=0.13 Score=37.72 Aligned_cols=92 Identities=20% Similarity=0.261 Sum_probs=56.0
Q ss_pred hhcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc-----CC-Cc
Q 031325 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE-----WR-GH 113 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~-~~ 113 (161)
......++++||-+|+|. |..++.+++. |..+|+++|.++..++.+++. |.. .++..+-.++. .. ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~-~vi~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT-HVINSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTSC
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC-EEecCCccCHHHHHHHhcCCC
Confidence 344556789999999875 6677777764 665799999999998887653 321 12211111110 01 15
Q ss_pred ccEEEECCCCCCCCCCcchHHHHHHHhhcCCcE
Q 031325 114 VDTVVMNPPFGTRKKGVDMDFLSMALKVASQAV 146 (161)
Q Consensus 114 ~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 146 (161)
+|+|+-... ....++.+.+.+++.+
T Consensus 259 ~D~vid~~g--------~~~~~~~~~~~l~~~G 283 (371)
T 1f8f_A 259 VNFALESTG--------SPEILKQGVDALGILG 283 (371)
T ss_dssp EEEEEECSC--------CHHHHHHHHHTEEEEE
T ss_pred CcEEEECCC--------CHHHHHHHHHHHhcCC
Confidence 898886322 1255677777776433
No 335
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.61 E-value=0.4 Score=34.54 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=68.5
Q ss_pred CeEEEecCCcchHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC----ceEEEEcccccccCCC----------ccc
Q 031325 50 KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL----DIDFVQCDIRNLEWRG----------HVD 115 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~~~----------~~D 115 (161)
..|+++|||-=.....+.......++=+| .|..++..++.+...+. +..++.+|+.+ .+.. ..-
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 57999999988776666532234888888 59999998888875432 57788899876 3211 234
Q ss_pred EEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 116 TVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 116 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
++++-..+++.........++.+.....++-+++.
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~ 216 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAV 216 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 66677777777766666788888777654444444
No 336
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.54 E-value=0.11 Score=38.51 Aligned_cols=101 Identities=23% Similarity=0.150 Sum_probs=59.6
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc-c------CCC-
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL-E------WRG- 112 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~------~~~- 112 (161)
.....++++||-+|+|. |..++.+++. |..+|+++|.++..++.+++ .|. ..+...-.+. . ...
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--~~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF--ETIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC--EEEETTSSSCHHHHHHHHHSSS
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC--cEEcCCCcchHHHHHHHHhCCC
Confidence 34566889999999876 7777777774 65589999999998887653 342 3332211111 0 012
Q ss_pred cccEEEECCCCCCC------CCCcchHHHHHHHhhcCCcEEEE
Q 031325 113 HVDTVVMNPPFGTR------KKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 113 ~~D~i~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
.+|+|+-...-... ........++.+.+.+++.+.++
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv 296 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIG 296 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEE
T ss_pred CCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEE
Confidence 58999864331100 00011246778888887444443
No 337
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=94.53 E-value=0.77 Score=32.20 Aligned_cols=76 Identities=25% Similarity=0.324 Sum_probs=51.3
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCC----------------hHHHHHHHHHHhhcCCceEEEEccccc
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID----------------SDSLELASENAADLELDIDFVQCDIRN 107 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~----------------~~~~~~a~~~~~~~~~~~~~~~~d~~~ 107 (161)
..++++|=.|++.|. ++..+++.|. +|+.+|.+ ++.++.....+...+.++.++..|+.+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 356778877776652 3444455565 89999887 566666656665555578899999987
Q ss_pred ccCC-----------CcccEEEECCCC
Q 031325 108 LEWR-----------GHVDTVVMNPPF 123 (161)
Q Consensus 108 ~~~~-----------~~~D~i~~~~p~ 123 (161)
...- ...|+++.|.-.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 5321 157999988654
No 338
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=94.52 E-value=0.8 Score=32.46 Aligned_cols=76 Identities=29% Similarity=0.356 Sum_probs=51.5
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccccCC
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEWR 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 111 (161)
..++++|=.|++.|. ++..+++.|. +|+.+|.+ +..++.....+...+.++.++..|+.+...-
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 356788877776652 3444455565 89999987 5666666666666566788999999875421
Q ss_pred -----------CcccEEEECCCC
Q 031325 112 -----------GHVDTVVMNPPF 123 (161)
Q Consensus 112 -----------~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 158999987553
No 339
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.39 E-value=0.04 Score=41.42 Aligned_cols=65 Identities=15% Similarity=0.274 Sum_probs=45.1
Q ss_pred CCeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC---C--CcccEEEE
Q 031325 49 NKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---R--GHVDTVVM 119 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~--~~~D~i~~ 119 (161)
..+|+=+|+| .++..+++ .+. .|+++|.++..++.++. .| +.++.+|..+... . ...|++++
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGV-KMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 3567777775 45544443 354 99999999999987763 23 6789999987532 1 27899988
Q ss_pred CCC
Q 031325 120 NPP 122 (161)
Q Consensus 120 ~~p 122 (161)
..+
T Consensus 75 ~~~ 77 (413)
T 3l9w_A 75 AID 77 (413)
T ss_dssp CCS
T ss_pred CCC
Confidence 555
No 340
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=94.33 E-value=0.84 Score=31.83 Aligned_cols=78 Identities=27% Similarity=0.326 Sum_probs=51.8
Q ss_pred CCCCeEEEecCCcc---hHHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccccCC
Q 031325 47 VSNKVVADFGCGCG---TLGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEWR 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G---~~~~~la~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 111 (161)
..++++|=.|++.| .++..+++.|. +|+.+|.+ ++.++...+.+...+.++.++.+|+.+...-
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 35677887776554 23344445565 89999987 6666666555555555789999999875321
Q ss_pred -----------CcccEEEECCCCCC
Q 031325 112 -----------GHVDTVVMNPPFGT 125 (161)
Q Consensus 112 -----------~~~D~i~~~~p~~~ 125 (161)
...|+++.|.-...
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC
Confidence 15799998866443
No 341
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=94.33 E-value=0.4 Score=33.51 Aligned_cols=74 Identities=20% Similarity=0.215 Sum_probs=50.4
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC-----------C-
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----------R- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-----------~- 111 (161)
.++++|-.|++ |.++..+ ++.|. +|+.++.++..++...+.+...+.++.++.+|+.+... .
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56777777765 4445444 44465 89999999887776666665555578889999876432 1
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 357999987653
No 342
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.31 E-value=0.12 Score=41.14 Aligned_cols=103 Identities=17% Similarity=0.104 Sum_probs=61.4
Q ss_pred CCeEEEecCCcchHHHHHHHc-----------C--CCeEEEEeC---ChHHHHHHH-----------HHHhhcC------
Q 031325 49 NKVVADFGCGCGTLGAAATLL-----------G--ADQVIAIDI---DSDSLELAS-----------ENAADLE------ 95 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~-----------~--~~~v~~~D~---~~~~~~~a~-----------~~~~~~~------ 95 (161)
.-+|+|+|-|+|.......+. . .-+++++|. +++.+..+- +.+..+.
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 358999999999876665432 1 126899998 665555222 2222221
Q ss_pred ---------CceEEEEcccccccCC------CcccEEEECCCCCCCC-CCcchHHHHHHHhhcCCcEEEEec
Q 031325 96 ---------LDIDFVQCDIRNLEWR------GHVDTVVMNPPFGTRK-KGVDMDFLSMALKVASQAVYSLHK 151 (161)
Q Consensus 96 ---------~~~~~~~~d~~~~~~~------~~~D~i~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 151 (161)
+.+++..+|+.+.... ..+|+++.|+.-...+ .-=..+++..+.+.++++..+...
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 2355777888764321 2699999987421111 111347788888888755544443
No 343
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.24 E-value=0.026 Score=39.54 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=32.5
Q ss_pred eEEEEcccccccC---CCcccEEEECCCCCCCCC------------CcchHHHHHHHhhcCCcEE
Q 031325 98 IDFVQCDIRNLEW---RGHVDTVVMNPPFGTRKK------------GVDMDFLSMALKVASQAVY 147 (161)
Q Consensus 98 ~~~~~~d~~~~~~---~~~~D~i~~~~p~~~~~~------------~~~~~~~~~~~~~~~~~~~ 147 (161)
..++++|+.+... ..++|+|++||||..... .....+++.+.+++++.+.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~ 69 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGS 69 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeE
Confidence 3577888865321 238999999999976411 0223677778888874333
No 344
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.23 E-value=0.051 Score=39.38 Aligned_cols=53 Identities=17% Similarity=0.160 Sum_probs=34.4
Q ss_pred eEEE-EcccccccC---CCcccEEEECCCCCCCC-----CC----cchHHHHHHHhhcCCcEEEEe
Q 031325 98 IDFV-QCDIRNLEW---RGHVDTVVMNPPFGTRK-----KG----VDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 98 ~~~~-~~d~~~~~~---~~~~D~i~~~~p~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~ 150 (161)
..++ ++|+.+... ..++|+|++||||.... .. ....++..+.+++++.+.+..
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i 104 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAI 104 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 5677 999976322 22899999999997641 11 223667777888875444443
No 345
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=94.16 E-value=0.95 Score=31.58 Aligned_cols=76 Identities=24% Similarity=0.308 Sum_probs=51.2
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeC-------------ChHHHHHHHHHHhhcCCceEEEEcccccccC
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-------------DSDSLELASENAADLELDIDFVQCDIRNLEW 110 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~-------------~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 110 (161)
..++++|=.|++.|. ++..+++.|. +|+.+|. ++..++...+.+...+.++.++..|+.+...
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 356778877766552 3344455565 8999988 5666666666666555578899999987532
Q ss_pred C-----------CcccEEEECCCC
Q 031325 111 R-----------GHVDTVVMNPPF 123 (161)
Q Consensus 111 ~-----------~~~D~i~~~~p~ 123 (161)
- ...|+++.|.-.
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 158999988654
No 346
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=94.14 E-value=0.43 Score=33.00 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=50.0
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC-----------C-
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----------R- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-----------~- 111 (161)
.++++|=.|++ |.++..++ +.|. +|+.++.++..++...+.+...+.++.++.+|+.+... .
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46677766654 44555444 4465 89999999887776666555545567888999877531 1
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 357999987653
No 347
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=94.05 E-value=0.29 Score=33.88 Aligned_cols=75 Identities=19% Similarity=0.091 Sum_probs=53.1
Q ss_pred CCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC----------Ccc
Q 031325 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------GHV 114 (161)
Q Consensus 48 ~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------~~~ 114 (161)
.++++|=.|++.|. ++..+++.|. +|+.++.++..++.+...+...+.++.++.+|+.+...- ...
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 56677777766552 3344445565 899999999888887777776666788999999775321 146
Q ss_pred cEEEECCCC
Q 031325 115 DTVVMNPPF 123 (161)
Q Consensus 115 D~i~~~~p~ 123 (161)
|+++.|.-.
T Consensus 85 d~lv~nAg~ 93 (252)
T 3h7a_A 85 EVTIFNVGA 93 (252)
T ss_dssp EEEEECCCC
T ss_pred eEEEECCCc
Confidence 999987654
No 348
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.88 E-value=0.23 Score=36.76 Aligned_cols=47 Identities=32% Similarity=0.316 Sum_probs=36.3
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
.....++++||-.|+|. |..++.+++. |...|+++|.+++.++.+++
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 34556788999999865 6677777775 55589999999999888754
No 349
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=93.84 E-value=0.51 Score=32.40 Aligned_cols=74 Identities=28% Similarity=0.327 Sum_probs=52.9
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
+++++|=.|++.| ++.. +++.|. +|+.++.++...+...+.+...+.++.++.+|+.+...- .
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5677887776554 4444 444565 899999999988887777766665788899999875321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+.-.
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 57999988653
No 350
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.78 E-value=0.28 Score=29.20 Aligned_cols=68 Identities=21% Similarity=0.267 Sum_probs=44.9
Q ss_pred CCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC----CCcccEEEEC
Q 031325 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW----RGHVDTVVMN 120 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~i~~~ 120 (161)
..+|+=+|+ |.++..++ +.|..+++++|.++..++... .. .+.+...|..+... ...+|+|+..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~ 76 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM--GVATKQVDAKDEAGLAKALGGFDAVISA 76 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT--TCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC--CCcEEEecCCCHHHHHHHHcCCCEEEEC
Confidence 457888888 55555544 345358999999988776554 22 35677777765321 1268999987
Q ss_pred CCCC
Q 031325 121 PPFG 124 (161)
Q Consensus 121 ~p~~ 124 (161)
.|+.
T Consensus 77 ~~~~ 80 (118)
T 3ic5_A 77 APFF 80 (118)
T ss_dssp SCGG
T ss_pred CCch
Confidence 7743
No 351
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.77 E-value=0.17 Score=38.23 Aligned_cols=71 Identities=20% Similarity=0.337 Sum_probs=46.5
Q ss_pred ccCCCCChhHHHHHHHHHH----hhcCCCCCCeEEEecCCcchHHHHHHHc----C--CCeEEEEeCChHHHHHHHHHHh
Q 031325 23 LEQYPTGPHIASRMLYTAE----NSFGDVSNKVVADFGCGCGTLGAAATLL----G--ADQVIAIDIDSDSLELASENAA 92 (161)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~vlD~g~G~G~~~~~la~~----~--~~~v~~~D~~~~~~~~a~~~~~ 92 (161)
.+.|.|.++++...-+.+. .........+|+|+|+|+|.+...+.+. + ..+++.+|+|+.+.+.-++.+.
T Consensus 108 ~GDFiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 108 GSDFVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp --CCSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCCccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 3577788888654333222 2111112468999999999987776542 2 3489999999999887777765
Q ss_pred h
Q 031325 93 D 93 (161)
Q Consensus 93 ~ 93 (161)
.
T Consensus 188 ~ 188 (432)
T 4f3n_A 188 A 188 (432)
T ss_dssp H
T ss_pred c
Confidence 4
No 352
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.65 E-value=1.2 Score=31.17 Aligned_cols=74 Identities=24% Similarity=0.287 Sum_probs=49.8
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccccCC---------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEWR--------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~~--------- 111 (161)
.++++|=.|++ |.++..++ +.|. +|+.++.++..++...+.+...+. ++.++.+|+.+...-
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 5 SNKTVIITGSS-NGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 45677766655 44555544 4455 899999998887766666655443 578899999875321
Q ss_pred --CcccEEEECCCC
Q 031325 112 --GHVDTVVMNPPF 123 (161)
Q Consensus 112 --~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 83 ~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 83 QFGKIDVLVNNAGA 96 (280)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 157999987653
No 353
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.62 E-value=1.1 Score=31.60 Aligned_cols=72 Identities=22% Similarity=0.209 Sum_probs=50.4
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.+++++|--|++.|. .+..+++.|. +|+.+|.+++.++.+.+.+ +-++..+.+|+.+...- +
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 478888888877762 4444555566 9999999998887665444 33678888998775421 1
Q ss_pred cccEEEECCC
Q 031325 113 HVDTVVMNPP 122 (161)
Q Consensus 113 ~~D~i~~~~p 122 (161)
..|+++.|.-
T Consensus 103 ~iDiLVNNAG 112 (273)
T 4fgs_A 103 RIDVLFVNAG 112 (273)
T ss_dssp CEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 6799998753
No 354
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.53 E-value=0.22 Score=31.60 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=41.5
Q ss_pred CeEEEecCCcchHHHHHHH----cCCCeEEEEeCC-hHHHHHHHHHHhhcCCceEEEEcccccccC-----CCcccEEEE
Q 031325 50 KVVADFGCGCGTLGAAATL----LGADQVIAIDID-SDSLELASENAADLELDIDFVQCDIRNLEW-----RGHVDTVVM 119 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~-~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-----~~~~D~i~~ 119 (161)
.+++=+|+ |..+..+++ .+. .|+.+|.+ ++..+..+.... . .+.++.+|..+... -...|+|++
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~-~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG-D--NADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC-T--TCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc-C--CCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 46776665 666655554 354 89999997 454544433221 1 36888999876422 127899998
Q ss_pred CCC
Q 031325 120 NPP 122 (161)
Q Consensus 120 ~~p 122 (161)
..+
T Consensus 78 ~~~ 80 (153)
T 1id1_A 78 LSD 80 (153)
T ss_dssp CSS
T ss_pred ecC
Confidence 555
No 355
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=93.47 E-value=0.54 Score=33.00 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=51.8
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++.| ++.. +++.|. +|+.++.++..++.+.+.+...+.++.++.+|+.+...- .
T Consensus 23 ~~k~~lVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSG-IGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4567777776554 4444 445565 899999999888887777776666788999999875321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 101 ~id~lv~nAg~ 111 (279)
T 3sju_A 101 PIGILVNSAGR 111 (279)
T ss_dssp SCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 57999987654
No 356
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.43 E-value=0.3 Score=35.66 Aligned_cols=89 Identities=17% Similarity=0.152 Sum_probs=54.6
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcc---ccccc----C--C
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCD---IRNLE----W--R 111 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d---~~~~~----~--~ 111 (161)
.....++++||-.|+|. |..++.+++. |..+|+++|.++...+.+++ .|.. .++..+ ..+.. . .
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-~vi~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD-LVLQISKESPQEIARKVEGQLG 240 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS-EEEECSSCCHHHHHHHHHHHHT
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC-EEEcCcccccchHHHHHHHHhC
Confidence 34566789999999874 6666777764 55589999999998887754 3432 122111 01110 0 0
Q ss_pred CcccEEEECCCCCCCCCCcchHHHHHHHhhcCC
Q 031325 112 GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ 144 (161)
Q Consensus 112 ~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~ 144 (161)
..+|+|+-... ....+....+.+++
T Consensus 241 ~g~D~vid~~g--------~~~~~~~~~~~l~~ 265 (356)
T 1pl8_A 241 CKPEVTIECTG--------AEASIQAGIYATRS 265 (356)
T ss_dssp SCCSEEEECSC--------CHHHHHHHHHHSCT
T ss_pred CCCCEEEECCC--------ChHHHHHHHHHhcC
Confidence 25899986332 12456777777774
No 357
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=93.43 E-value=0.49 Score=32.70 Aligned_cols=73 Identities=29% Similarity=0.343 Sum_probs=51.5
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
+++++|=.|++.| ++..+ ++.|. +|+.++.++..++.+...+...+-++.++.+|+.+...- .
T Consensus 5 ~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSG-MGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5667776665544 44444 44565 899999999988887777766555788999999875321 1
Q ss_pred cccEEEECCC
Q 031325 113 HVDTVVMNPP 122 (161)
Q Consensus 113 ~~D~i~~~~p 122 (161)
..|+++.|.-
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 5799998764
No 358
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=93.40 E-value=0.85 Score=32.33 Aligned_cols=74 Identities=22% Similarity=0.227 Sum_probs=51.3
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~----------- 111 (161)
.++++|-.|++.| ++.. +++.|. +|+.++.++..++...+.+...+. ++.++.+|+.+...-
T Consensus 40 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKG-IGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 5667776666544 4444 444565 999999998888777777766553 788999999875321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 118 g~iD~lvnnAg~ 129 (293)
T 3rih_A 118 GALDVVCANAGI 129 (293)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 157999987553
No 359
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=93.37 E-value=0.59 Score=32.90 Aligned_cols=74 Identities=23% Similarity=0.261 Sum_probs=52.6
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
+++++|=.|++.| ++.. +++.|. +|+.++.++..++.+...+...+-++.++.+|+.+...- +
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5677777776655 4444 445565 999999999888877777766555788999999875321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999987654
No 360
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=93.37 E-value=0.62 Score=31.83 Aligned_cols=75 Identities=19% Similarity=0.172 Sum_probs=52.9
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++ |.++..+ ++.|. +|+.++.++...+.....+...+.++.++..|+.+...- .
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45677766655 4444444 44565 899999999888887777777666889999999775321 1
Q ss_pred cccEEEECCCCC
Q 031325 113 HVDTVVMNPPFG 124 (161)
Q Consensus 113 ~~D~i~~~~p~~ 124 (161)
..|+++.+.-..
T Consensus 82 ~id~li~~Ag~~ 93 (247)
T 3lyl_A 82 AIDILVNNAGIT 93 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 579999876543
No 361
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=93.34 E-value=0.56 Score=32.50 Aligned_cols=74 Identities=24% Similarity=0.326 Sum_probs=53.0
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++ |+++..++ +.|. +|+.++.++..++...+.+...+.++.++.+|+.+...- .
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 56777777765 44555544 4455 899999999888887777776666788999999775421 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+.-.
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 58999987654
No 362
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=93.26 E-value=0.58 Score=32.66 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=51.7
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++.| ++.. +++.|. +|+.++.++..++.+.+.+...+.++.++.+|+.+...- +
T Consensus 3 ~~k~~lVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGG-IGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccH-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3566776666654 4444 444565 899999999888887777776665788888999775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987654
No 363
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.23 E-value=1.4 Score=31.28 Aligned_cols=74 Identities=27% Similarity=0.311 Sum_probs=49.9
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccccCC---------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEWR--------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~~--------- 111 (161)
.++++|=.|+ +|+++..++ +.|. +|+.++.++..++.....+...+. ++.++.+|+.+...-
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 5667776665 455555554 4455 899999998877766666655444 578899998775321
Q ss_pred --CcccEEEECCCC
Q 031325 112 --GHVDTVVMNPPF 123 (161)
Q Consensus 112 --~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 103 ~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 103 KFGKIDILVNNAGA 116 (297)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 157999988654
No 364
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=93.20 E-value=0.2 Score=35.67 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHhhcCCceEEE--EcccccccCC-CcccEEEECCCCCC
Q 031325 81 SDSLELASENAADLELDIDFV--QCDIRNLEWR-GHVDTVVMNPPFGT 125 (161)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~--~~d~~~~~~~-~~~D~i~~~~p~~~ 125 (161)
++.+..+.+.++. +.+. ++|..+.... ..=|+|++||||..
T Consensus 156 ~~~l~~~~~~l~~----v~i~~~~~Df~~~i~~~~~~~fvY~DPPY~~ 199 (284)
T 2dpm_A 156 EELISAISVYINN----NQLEIKVGDFEKAIVDVRTGDFVYFDPPYIP 199 (284)
T ss_dssp HHHHHHHHHHHHH----SEEEEEESCGGGGGTTCCTTCEEEECCCCCC
T ss_pred HHHHHHHHHHhCC----CEEEEeCCCHHHHHHhcCCCCEEEeCCCccc
Confidence 4556655566553 6777 9999886443 25589999999964
No 365
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.19 E-value=0.41 Score=34.58 Aligned_cols=94 Identities=20% Similarity=0.197 Sum_probs=57.4
Q ss_pred hhcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC-----CCcc
Q 031325 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----RGHV 114 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-----~~~~ 114 (161)
......++++||-.|+|. |..++.+++. |. +|+++|.+++..+.+++ .|... ++...-.+... ...+
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~~-~i~~~~~~~~~~~~~~~g~~ 233 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGAEV-AVNARDTDPAAWLQKEIGGA 233 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCSE-EEETTTSCHHHHHHHHHSSE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCCCE-EEeCCCcCHHHHHHHhCCCC
Confidence 344566888999999875 7777777775 55 99999999999887755 33221 11111111100 0157
Q ss_pred cEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEE
Q 031325 115 DTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSL 149 (161)
Q Consensus 115 D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (161)
|+++-... ....++.+.+.+++.+.++
T Consensus 234 d~vid~~g--------~~~~~~~~~~~l~~~G~iv 260 (340)
T 3s2e_A 234 HGVLVTAV--------SPKAFSQAIGMVRRGGTIA 260 (340)
T ss_dssp EEEEESSC--------CHHHHHHHHHHEEEEEEEE
T ss_pred CEEEEeCC--------CHHHHHHHHHHhccCCEEE
Confidence 88876422 2256777778876443333
No 366
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=93.16 E-value=1.4 Score=30.44 Aligned_cols=75 Identities=20% Similarity=0.127 Sum_probs=51.4
Q ss_pred CCCeEEEecCCcc---hHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhh-cCC-ceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCG---TLGAAATLLGADQVIAIDIDSDSLELASENAAD-LEL-DIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G---~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~-~~~-~~~~~~~d~~~~~~~----------- 111 (161)
.++++|=.|++.| .++..+++.|. +|+.++.++..++.+.+.+.. .+- ++.++.+|+.+...-
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5677887776655 23344445565 899999999888777666655 333 588899999875321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 86 g~id~lvnnAg~ 97 (265)
T 3lf2_A 86 GCASILVNNAGQ 97 (265)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 157999988654
No 367
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.15 E-value=1.5 Score=30.50 Aligned_cols=65 Identities=12% Similarity=0.136 Sum_probs=47.0
Q ss_pred CeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCC
Q 031325 50 KVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~ 124 (161)
.+||=.|+ |.++..+++ .|. +|++++.++........ . +++++.+|+.++. ...+|+|+......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~----~--~~~~~~~D~~d~~-~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA----S--GAEPLLWPGEEPS-LDGVTHLLISTAPD 74 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH----T--TEEEEESSSSCCC-CTTCCEEEECCCCB
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh----C--CCeEEEecccccc-cCCCCEEEECCCcc
Confidence 57999994 877777765 354 99999998865543322 2 4889999998866 44799999866543
No 368
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=93.13 E-value=1.5 Score=30.49 Aligned_cols=73 Identities=14% Similarity=0.100 Sum_probs=48.9
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC------CcccEE
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR------GHVDTV 117 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~------~~~D~i 117 (161)
.+++++|--|++.|. ++..+++.|. +|+..|.+.. +.+.+.+...+-++..+..|+.+.... ...|++
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 367778877777662 4445555566 8888998753 233444555566788999999875432 168999
Q ss_pred EECCC
Q 031325 118 VMNPP 122 (161)
Q Consensus 118 ~~~~p 122 (161)
+.|.-
T Consensus 84 VNNAG 88 (247)
T 4hp8_A 84 VNNAG 88 (247)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98754
No 369
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=93.01 E-value=0.74 Score=32.66 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=45.7
Q ss_pred CCCCCeEEEecCCcch--HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-CcccEEEECCC
Q 031325 46 DVSNKVVADFGCGCGT--LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-GHVDTVVMNPP 122 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~--~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~~D~i~~~~p 122 (161)
...+++++=+|+|.-. ....+++.|..+++.++.+++..+...+.+......+.+...+..++... ..+|+|+..-|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 4568899999987322 23334555776899999998777655554443221122222222222111 15788887766
Q ss_pred CCC
Q 031325 123 FGT 125 (161)
Q Consensus 123 ~~~ 125 (161)
.+.
T Consensus 204 ~Gm 206 (283)
T 3jyo_A 204 MGM 206 (283)
T ss_dssp TTS
T ss_pred CCC
Confidence 554
No 370
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=92.90 E-value=0.6 Score=32.74 Aligned_cols=76 Identities=25% Similarity=0.308 Sum_probs=53.4
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.+++++|=.|++.|. ++..+++.|. +|+.++.++..++...+.+...+.++.++.+|+.+...- .
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 367788877766552 3334445565 899999998888877777766666788999999875421 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 109 ~iD~lvnnAg~ 119 (276)
T 3r1i_A 109 GIDIAVCNAGI 119 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999987654
No 371
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.89 E-value=0.39 Score=34.95 Aligned_cols=49 Identities=20% Similarity=0.231 Sum_probs=37.0
Q ss_pred hhcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHH
Q 031325 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~ 90 (161)
......++++||-+|+|. |..++.+++. |..+|+++|.++..++.+++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 444566889999999864 5666677765 555899999999988887653
No 372
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=92.69 E-value=0.76 Score=32.09 Aligned_cols=74 Identities=18% Similarity=0.139 Sum_probs=51.9
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++. +++..+ ++.|. +|+.++.++...+.....+...+.++.++..|+.+...- .
T Consensus 27 ~~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASR-GIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 566777666554 444444 44565 999999999888877777776666788888998775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 105 ~iD~lvnnAg~ 115 (270)
T 3ftp_A 105 ALNVLVNNAGI 115 (270)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999988653
No 373
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.68 E-value=0.56 Score=32.55 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=46.8
Q ss_pred CCeEEEecCCc-ch-HHHHHHHcCCCeEEEEeCCh-------------------HHHHHHHHHHhhcCC--ceEEEEccc
Q 031325 49 NKVVADFGCGC-GT-LGAAATLLGADQVIAIDIDS-------------------DSLELASENAADLEL--DIDFVQCDI 105 (161)
Q Consensus 49 ~~~vlD~g~G~-G~-~~~~la~~~~~~v~~~D~~~-------------------~~~~~a~~~~~~~~~--~~~~~~~d~ 105 (161)
+.+|+=+|||. |. .+..|+..|..+++.+|.+. ...+.+.+.+..... ++..+..++
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 46899999983 32 44445566888999999987 667777776665432 455555444
Q ss_pred ccccCC---CcccEEEECCC
Q 031325 106 RNLEWR---GHVDTVVMNPP 122 (161)
Q Consensus 106 ~~~~~~---~~~D~i~~~~p 122 (161)
.+.... ..+|+|+...+
T Consensus 111 ~~~~~~~~~~~~DvVi~~~d 130 (249)
T 1jw9_B 111 DDAELAALIAEHDLVLDCTD 130 (249)
T ss_dssp CHHHHHHHHHTSSEEEECCS
T ss_pred CHhHHHHHHhCCCEEEEeCC
Confidence 321111 16899997543
No 374
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=92.53 E-value=0.56 Score=32.88 Aligned_cols=74 Identities=20% Similarity=0.189 Sum_probs=52.2
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC----------Cc
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------GH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------~~ 113 (161)
.++++|=.|++.| ++.. +++.|. +|+.++.++...+.+...+...+.++.++.+|+.+.... ..
T Consensus 32 ~gk~~lVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRG-IGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5677777776544 4444 444565 899999998887777777666666788999999875321 15
Q ss_pred ccEEEECCCC
Q 031325 114 VDTVVMNPPF 123 (161)
Q Consensus 114 ~D~i~~~~p~ 123 (161)
.|+++.|.-.
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999987654
No 375
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.53 E-value=1.1 Score=31.21 Aligned_cols=75 Identities=24% Similarity=0.321 Sum_probs=51.5
Q ss_pred CCCCeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 47 VSNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
..++++|=.|++ |.++..+++ .|. +|++++.++..++...+.++..+.++.++.+|+.+...-
T Consensus 29 l~~k~vlITGas-ggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 29 VTGEIVLITGAG-HGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 356677777654 555555544 455 899999998877766666665555788999998765321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 107 g~iD~li~~Ag~ 118 (272)
T 1yb1_A 107 GDVSILVNNAGV 118 (272)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 157999987654
No 376
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.53 E-value=0.5 Score=29.99 Aligned_cols=67 Identities=22% Similarity=0.297 Sum_probs=40.5
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc---CC--CcccEEE
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE---WR--GHVDTVV 118 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~--~~~D~i~ 118 (161)
++.+|+=+|+| .++..++ +.+. .|+++|.++..++.++. .. ...++.+|..+.. .. ..+|+|+
T Consensus 18 ~~~~v~IiG~G--~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 18 KSKYIVIFGCG--RLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 56789988875 4444433 3455 99999999876654321 22 2456667654321 11 1689998
Q ss_pred ECCC
Q 031325 119 MNPP 122 (161)
Q Consensus 119 ~~~p 122 (161)
...+
T Consensus 90 ~~~~ 93 (155)
T 2g1u_A 90 AFTN 93 (155)
T ss_dssp ECSS
T ss_pred EEeC
Confidence 7555
No 377
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.51 E-value=1.2 Score=31.15 Aligned_cols=76 Identities=24% Similarity=0.247 Sum_probs=52.1
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeC-------------ChHHHHHHHHHHhhcCCceEEEEcccccccC
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-------------DSDSLELASENAADLELDIDFVQCDIRNLEW 110 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~-------------~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 110 (161)
..++++|=.|++.|. ++..+++.|. +|+.+|. ++..++...+.+...+.++.++..|+.+...
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 366778877766552 3344455565 8999997 6777777766666666678899999977532
Q ss_pred C-----------CcccEEEECCCC
Q 031325 111 R-----------GHVDTVVMNPPF 123 (161)
Q Consensus 111 ~-----------~~~D~i~~~~p~ 123 (161)
- ...|+++.|.-.
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 157999987654
No 378
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=92.48 E-value=1.1 Score=30.90 Aligned_cols=74 Identities=23% Similarity=0.386 Sum_probs=50.5
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++.| ++..+ ++.|. +|+.++.++..++...+.+...+.++.++.+|+.+...- .
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGN-IGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 5667777766544 44444 44465 899999998887776666655555688889998775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987643
No 379
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.46 E-value=0.39 Score=35.24 Aligned_cols=47 Identities=23% Similarity=0.294 Sum_probs=35.2
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
.....++++||-+|+|. |..++.+++. |..+|+++|.++..++.+++
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 34556788999999764 5566666664 65589999999998888764
No 380
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=92.46 E-value=1.1 Score=31.41 Aligned_cols=75 Identities=24% Similarity=0.276 Sum_probs=51.9
Q ss_pred CCCeEEEecCCcc---hHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccccCC----------
Q 031325 48 SNKVVADFGCGCG---TLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G---~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~~---------- 111 (161)
.++++|=.|++.| .++..+++.|. +|+.++.++..++.+.+.+...+. ++.++.+|+.+...-
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5677887776554 23334445565 899999999888877777766554 678899999875421
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 157999987653
No 381
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=92.45 E-value=1.1 Score=30.75 Aligned_cols=74 Identities=30% Similarity=0.311 Sum_probs=50.0
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++ |.++..++ +.|. +|++++.++...+...+.+...+.++.++.+|+.+...- .
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46677777654 55555554 4455 899999998777666555555455788999999775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+.-.
T Consensus 90 ~id~vi~~Ag~ 100 (260)
T 3awd_A 90 RVDILVACAGI 100 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 47999987643
No 382
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=92.44 E-value=1.1 Score=30.66 Aligned_cols=74 Identities=19% Similarity=0.239 Sum_probs=50.4
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++. +++..+ ++.|. +|+.++.++..++...+.+...+.++.++.+|+.+...- .
T Consensus 6 ~~k~~lVTGas~-gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGASS-GIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESCSS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 456777777654 455444 44455 899999998887766666655455788889998775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987653
No 383
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=92.43 E-value=2 Score=30.11 Aligned_cols=72 Identities=25% Similarity=0.343 Sum_probs=49.0
Q ss_pred CCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------Cc
Q 031325 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~~ 113 (161)
.++++|=.|++.|. ++..+++.|. +|+.++.++..++.+.+.+ +.++.++.+|+.+...- ..
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56778877766552 3444555565 9999999988776655544 34678899999875321 15
Q ss_pred ccEEEECCCC
Q 031325 114 VDTVVMNPPF 123 (161)
Q Consensus 114 ~D~i~~~~p~ 123 (161)
.|+++.|.-.
T Consensus 104 iD~lvnnAg~ 113 (277)
T 3gvc_A 104 VDKLVANAGV 113 (277)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999987654
No 384
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=92.38 E-value=2 Score=30.07 Aligned_cols=100 Identities=12% Similarity=0.078 Sum_probs=63.0
Q ss_pred CCeEEEecCCcchHHHHHHHc--------CCCeEEEEe-----CChH-------------------HHHHHHH------H
Q 031325 49 NKVVADFGCGCGTLGAAATLL--------GADQVIAID-----IDSD-------------------SLELASE------N 90 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~--------~~~~v~~~D-----~~~~-------------------~~~~a~~------~ 90 (161)
+..|+|+|+-.|..+..++.. ...++++.| ..+. ..+..++ +
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 448999999999988886652 236999999 3210 0111121 1
Q ss_pred HhhcCC---ceEEEEcccccccC------CC-cccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEecc
Q 031325 91 AADLEL---DIDFVQCDIRNLEW------RG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKT 152 (161)
Q Consensus 91 ~~~~~~---~~~~~~~d~~~~~~------~~-~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (161)
....+. ++.++.|++.+..+ .. ++|++..|.-. -......++.+...++++++++...
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhCCCcEEEEcC
Confidence 122333 79999999987532 12 69999997641 1223366788887777666666643
No 385
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.31 E-value=0.47 Score=34.65 Aligned_cols=92 Identities=15% Similarity=0.031 Sum_probs=56.2
Q ss_pred hhcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEE-----ccccc----ccC
Q 031325 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQ-----CDIRN----LEW 110 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~-----~d~~~----~~~ 110 (161)
......++++||-.|+|. |..++.+++. |...|+++|.+++..+.+++. ... -+.... .|..+ ...
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~--~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE--VVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT--CEEEECCSCCHHHHHHHHHHHTS
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh--cccccccccchHHHHHHHHHHhC
Confidence 344566888999999864 5666667765 664599999999999998876 321 112211 11111 111
Q ss_pred CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCC
Q 031325 111 RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ 144 (161)
Q Consensus 111 ~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~ 144 (161)
...+|+++-... ....+..+.+.+++
T Consensus 250 g~g~Dvvid~~g--------~~~~~~~~~~~l~~ 275 (363)
T 3m6i_A 250 GIEPAVALECTG--------VESSIAAAIWAVKF 275 (363)
T ss_dssp SCCCSEEEECSC--------CHHHHHHHHHHSCT
T ss_pred CCCCCEEEECCC--------ChHHHHHHHHHhcC
Confidence 126899986322 12466777778764
No 386
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.28 E-value=0.062 Score=48.99 Aligned_cols=99 Identities=21% Similarity=0.148 Sum_probs=48.8
Q ss_pred CCCeEEEecCCcchHHHHHHHc-C-----CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccc-c-CCCcccEEEE
Q 031325 48 SNKVVADFGCGCGTLGAAATLL-G-----ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL-E-WRGHVDTVVM 119 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~~-~-----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~-~~~~~D~i~~ 119 (161)
+..+||++|.|+|..+..+.+. + ..+++.+|+++...+.+++.++... +..-.-|..+. . ....||+|++
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d--i~~~~~d~~~~~~~~~~~ydlvia 1317 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH--VTQGQWDPANPAPGSLGKADLLVC 1317 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT--EEEECCCSSCCCC-----CCEEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc--cccccccccccccCCCCceeEEEE
Confidence 4568999999999766554432 1 2478999999988887777765432 22211132221 1 1227999998
Q ss_pred CCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 120 NPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 120 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
....+.. ......+.++.++++++++++.
T Consensus 1318 ~~vl~~t--~~~~~~l~~~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1318 NCALATL--GDPAVAVGNMAATLKEGGFLLL 1346 (2512)
T ss_dssp ECC----------------------CCEEEE
T ss_pred ccccccc--ccHHHHHHHHHHhcCCCcEEEE
Confidence 7776532 2223677788888886666554
No 387
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=92.25 E-value=1.1 Score=31.16 Aligned_cols=74 Identities=23% Similarity=0.301 Sum_probs=51.3
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhh-cCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAAD-LELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~-~~~~~~~~~~d~~~~~~~----------- 111 (161)
.++++|=.|++.| ++.. +++.|. +|+.++.++..++.+.+.+.. .+.++.++.+|+.+...-
T Consensus 19 ~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKG-IGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5667777766554 4444 444565 899999998888777666654 455788999999876431
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 157999987654
No 388
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.23 E-value=0.32 Score=35.80 Aligned_cols=96 Identities=26% Similarity=0.307 Sum_probs=56.9
Q ss_pred hhcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcc--ccccc------CC
Q 031325 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCD--IRNLE------WR 111 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~~~------~~ 111 (161)
......++.+||-+|+|. |..++.+++. |..+|+++|.+++.++.+++ .|... ++... -.++. ..
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~-vi~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVNE-FVNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCCE-EECGGGCSSCHHHHHHHHTT
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCcE-EEccccCchhHHHHHHHhcC
Confidence 344556788999999863 5666666664 66689999999999887753 34221 11111 00110 01
Q ss_pred CcccEEEECCCCCCCCCCcchHHHHHHHhhcCC--cEEEEe
Q 031325 112 GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ--AVYSLH 150 (161)
Q Consensus 112 ~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 150 (161)
..+|+|+-... ....++.+.+.+++ +.+++.
T Consensus 262 gg~D~vid~~g--------~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 262 GGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SCBSEEEECSC--------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCC--------CHHHHHHHHHHhhccCCEEEEE
Confidence 16899886322 22567777788764 344443
No 389
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=92.23 E-value=1.2 Score=31.09 Aligned_cols=74 Identities=20% Similarity=0.257 Sum_probs=50.2
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
+++++|-.|++ |.++..+ ++.|. +|++++.++..++...+.+...+.++.++.+|+.+...- .
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 45677777765 4444444 44465 899999998877766666655455688889998764321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+.-.
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999987653
No 390
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=92.18 E-value=0.51 Score=33.02 Aligned_cols=74 Identities=20% Similarity=0.252 Sum_probs=52.7
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++.| ++.. +++.|. +|+.++.++..++...+.+...+.++.++.+|+.+...- .
T Consensus 25 ~gk~~lVTGas~g-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRG-LGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 5677777775554 4444 444565 899999999888887777776666788889999775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 103 ~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 DVDILVNNAGI 113 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987654
No 391
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.12 E-value=1.1 Score=31.02 Aligned_cols=74 Identities=19% Similarity=0.195 Sum_probs=51.8
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcC-CceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLE-LDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~----------- 111 (161)
.++++|=.|++. .++..+ ++.|. +|+.++.++..++.+...+...+ .++.++.+|+.+...-
T Consensus 9 ~~k~vlVTGas~-gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTK-GIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 566777666554 444444 44565 99999999988887777776655 3788999999875321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 87 g~id~lvnnAg~ 98 (262)
T 3pk0_A 87 GGIDVVCANAGV 98 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 158999987543
No 392
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.07 E-value=1.3 Score=31.80 Aligned_cols=75 Identities=23% Similarity=0.167 Sum_probs=52.8
Q ss_pred CCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~----------- 111 (161)
.++++|=.|++.|. ++..+++.|. +|++++.++..++.+.+.+...+. ++.++..|+.+...-
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 56778877776552 3334445565 899999999888877777665554 688999999875321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 157999988654
No 393
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=92.06 E-value=2 Score=29.45 Aligned_cols=73 Identities=23% Similarity=0.293 Sum_probs=48.8
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.+++++|=.|++.|. ++..+++.|. +|+.++.++..++.....+ +.++.++.+|+.+...- .
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 356778877766552 3344455565 8999999988776655544 33678888898765321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 80 ~id~lv~nAg~ 90 (247)
T 3rwb_A 80 GIDILVNNASI 90 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999987654
No 394
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.01 E-value=2.1 Score=29.49 Aligned_cols=73 Identities=18% Similarity=0.174 Sum_probs=49.4
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
..++++|=.|++.|. ++..+++.|. +|+.++.++..++...+.+ +.++.++.+|+.+...- .
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 356788877766552 3334445565 9999999988877665554 22678899999875421 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 82 ~id~lv~nAg~ 92 (255)
T 4eso_A 82 AIDLLHINAGV 92 (255)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999987654
No 395
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.00 E-value=0.48 Score=34.76 Aligned_cols=88 Identities=24% Similarity=0.340 Sum_probs=53.8
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccc----ccC------
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN----LEW------ 110 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~------ 110 (161)
.....++++||-.|+|. |..++.+++. |..+|+++|.++..++.+++ .|.. .++ |..+ +..
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~-~vi--~~~~~~~~~~~~~~~~~ 259 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT-DFV--NPNDHSEPISQVLSKMT 259 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC-EEE--CGGGCSSCHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc-eEE--eccccchhHHHHHHHHh
Confidence 34556788999999764 5566666664 55589999999998888764 2321 111 1111 100
Q ss_pred CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCc
Q 031325 111 RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQA 145 (161)
Q Consensus 111 ~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 145 (161)
...+|+|+-... ....+..+.+.+++.
T Consensus 260 ~~g~D~vid~~g--------~~~~~~~~~~~l~~~ 286 (374)
T 1cdo_A 260 NGGVDFSLECVG--------NVGVMRNALESCLKG 286 (374)
T ss_dssp TSCBSEEEECSC--------CHHHHHHHHHTBCTT
T ss_pred CCCCCEEEECCC--------CHHHHHHHHHHhhcC
Confidence 015899886332 125677778887743
No 396
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=91.97 E-value=1.1 Score=31.57 Aligned_cols=75 Identities=19% Similarity=0.155 Sum_probs=51.7
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccc-cC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL-EW----------- 110 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~-~~----------- 110 (161)
.++++|=.|++ |+++..++ +.|. +|++++.++...+.+.+.+...+- ++.++.+|+.+. ..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 45667766655 44555544 4465 999999999888777776665543 788999999886 21
Q ss_pred CCcccEEEECCCCC
Q 031325 111 RGHVDTVVMNPPFG 124 (161)
Q Consensus 111 ~~~~D~i~~~~p~~ 124 (161)
....|+++.|.-..
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 01689999987643
No 397
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=91.97 E-value=1.1 Score=30.89 Aligned_cols=72 Identities=24% Similarity=0.287 Sum_probs=48.6
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC------------C
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW------------R 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~------------~ 111 (161)
.++++|=.|++ |+++..++ +.|. +|+.++.++..++.+.+.+...+.++.++.+|+.+... .
T Consensus 4 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTGAS-RGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 45667766654 44555544 4465 89999999887776666555545467888999876432 1
Q ss_pred CcccEEEECC
Q 031325 112 GHVDTVVMNP 121 (161)
Q Consensus 112 ~~~D~i~~~~ 121 (161)
...|+++.|.
T Consensus 82 g~id~lvnnA 91 (260)
T 2qq5_A 82 GRLDVLVNNA 91 (260)
T ss_dssp TCCCEEEECC
T ss_pred CCceEEEECC
Confidence 2469999887
No 398
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=91.96 E-value=0.5 Score=33.26 Aligned_cols=74 Identities=18% Similarity=0.189 Sum_probs=51.6
Q ss_pred CCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------Cc
Q 031325 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~~ 113 (161)
.++++|=.|++.|. ++..+++.|. +|+.++.++..++.....+...+.++.++.+|+.+...- ..
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56777777766542 3334445565 899999999888877777766555788888998775321 15
Q ss_pred ccEEEECCC
Q 031325 114 VDTVVMNPP 122 (161)
Q Consensus 114 ~D~i~~~~p 122 (161)
.|+++.|.-
T Consensus 86 iD~lvnnAg 94 (280)
T 3tox_A 86 LDTAFNNAG 94 (280)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998765
No 399
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.95 E-value=0.81 Score=31.79 Aligned_cols=74 Identities=18% Similarity=0.149 Sum_probs=49.2
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcC--CceEEEEcccccccC-------CCcc
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLE--LDIDFVQCDIRNLEW-------RGHV 114 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~-------~~~~ 114 (161)
.++++|=.|++.| ++..+ ++.|. +|+.++.++..++...+.+...+ ..+.++..|+.+... ....
T Consensus 9 ~~k~~lVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAG-IGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 5667777776544 44444 44565 89999999888777666665543 256788888876432 1268
Q ss_pred cEEEECCCC
Q 031325 115 DTVVMNPPF 123 (161)
Q Consensus 115 D~i~~~~p~ 123 (161)
|+++.|.-.
T Consensus 87 d~lv~nAg~ 95 (267)
T 3t4x_A 87 DILINNLGI 95 (267)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987553
No 400
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.91 E-value=1.4 Score=30.43 Aligned_cols=76 Identities=20% Similarity=0.213 Sum_probs=55.0
Q ss_pred CCCCeEEEecCCc--c---hHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC---------
Q 031325 47 VSNKVVADFGCGC--G---TLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR--------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~--G---~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~--------- 111 (161)
.+++++|=-|+++ | .++..+++.|. +|+.++.++...+.+.+.++..+- ++.++..|+.+...-
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4788999998643 3 24455566666 999999999888888777776554 788899999775321
Q ss_pred --CcccEEEECCCC
Q 031325 112 --GHVDTVVMNPPF 123 (161)
Q Consensus 112 --~~~D~i~~~~p~ 123 (161)
...|+++.|..+
T Consensus 83 ~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 83 DVGNIDGVYHSIAF 96 (256)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HhCCCCEEEecccc
Confidence 268999988554
No 401
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=91.89 E-value=1.6 Score=30.53 Aligned_cols=76 Identities=20% Similarity=0.293 Sum_probs=50.7
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
..++++|=.|++.|. ++..+++.|. +|+.++. ++..++.....+...+.++.++.+|+.+...-
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 356677777765552 3334445565 8988885 77777766666666566789999999876431
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 106 g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 GRIDCLVNNAGI 117 (280)
T ss_dssp SCCCEEEEECC-
T ss_pred CCCCEEEECCCc
Confidence 157999987654
No 402
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=91.83 E-value=0.55 Score=34.39 Aligned_cols=47 Identities=30% Similarity=0.392 Sum_probs=35.0
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
.....++++||-.|+|. |..++.+++. |..+|+++|.++...+.+++
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 34556788999999764 5566666664 65589999999999888764
No 403
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.77 E-value=0.52 Score=34.57 Aligned_cols=47 Identities=30% Similarity=0.491 Sum_probs=34.9
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
.....++++||-.|+|. |..++.+++. |..+|+++|.+++.++.+++
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 34556788999999763 5566666664 55589999999998887754
No 404
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.72 E-value=0.54 Score=34.49 Aligned_cols=47 Identities=28% Similarity=0.338 Sum_probs=34.9
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
.....++++||-.|+|. |..++.+++. |..+|+++|.++..++.+++
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 34556788999999764 5566666664 55589999999998887753
No 405
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.68 E-value=0.68 Score=33.98 Aligned_cols=94 Identities=23% Similarity=0.209 Sum_probs=56.6
Q ss_pred hhcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEE---cccccc-c----C-
Q 031325 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQ---CDIRNL-E----W- 110 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~---~d~~~~-~----~- 110 (161)
......++.+||-.|+|. |..++.+++. |..+|+++|.++...+.+++. |... ++. .|..+. . .
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~-vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GATA-TVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCSE-EECTTSSCHHHHHHSTTSSS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCCE-EECCCCcCHHHHHHhhhhcc
Confidence 344566889999999864 5666666665 555999999999998887653 3211 111 111110 0 1
Q ss_pred CCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEE
Q 031325 111 RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 111 ~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (161)
...+|+|+-... ....++.+.+.+++.+.+
T Consensus 251 ~gg~Dvvid~~G--------~~~~~~~~~~~l~~~G~v 280 (370)
T 4ej6_A 251 PGGVDVVIECAG--------VAETVKQSTRLAKAGGTV 280 (370)
T ss_dssp TTCEEEEEECSC--------CHHHHHHHHHHEEEEEEE
T ss_pred CCCCCEEEECCC--------CHHHHHHHHHHhccCCEE
Confidence 116899886322 125677778887743333
No 406
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=91.68 E-value=1 Score=31.02 Aligned_cols=74 Identities=24% Similarity=0.250 Sum_probs=47.9
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccccCCC---------
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEWRG--------- 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~~~~--------- 112 (161)
.++++|-.|++ |.++..+ ++.|. +|+.++.++..++...+.+... +.++.++.+|+.+...-.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGS-SGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 45677777765 4455544 44465 8999999988776655555432 225788889987653210
Q ss_pred -cccEEEECCCC
Q 031325 113 -HVDTVVMNPPF 123 (161)
Q Consensus 113 -~~D~i~~~~p~ 123 (161)
..|+++.+...
T Consensus 84 ~gid~lv~~Ag~ 95 (260)
T 2z1n_A 84 GGADILVYSTGG 95 (260)
T ss_dssp TCCSEEEECCCC
T ss_pred cCCCEEEECCCC
Confidence 27999988654
No 407
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=91.65 E-value=1.4 Score=31.12 Aligned_cols=74 Identities=19% Similarity=0.257 Sum_probs=50.1
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|-.|++ |.++..++ +.|. +|+.++.++..++...+.+...+.++.++.+|+.+...- .
T Consensus 33 ~~k~vlVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 33 KGKIALVTGAS-YGIGFAIASAYAKAGA-TIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 56777777765 44555544 4455 899999998877766666655555678889998775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+.-.
T Consensus 111 ~iD~lvnnAg~ 121 (291)
T 3cxt_A 111 IIDILVNNAGI 121 (291)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 48999987543
No 408
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=91.64 E-value=1.6 Score=30.05 Aligned_cols=74 Identities=23% Similarity=0.277 Sum_probs=49.3
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++ |.++..++ +.|. +|+.++.++..++...+.+...+.++.++.+|+.+...- .
T Consensus 13 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 13 ENKVALVTAST-DGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 56677766654 55555554 4465 999999998877666555555555678888898764321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+.-.
T Consensus 91 ~iD~lv~~Ag~ 101 (260)
T 2zat_A 91 GVDILVSNAAV 101 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999987543
No 409
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=91.64 E-value=1.5 Score=30.38 Aligned_cols=74 Identities=23% Similarity=0.351 Sum_probs=49.4
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccccCC----------
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~~~---------- 111 (161)
.++++|=.|++ |+++..+ ++.|. +|+.++.++..++.+.+.+... +.++.++.+|+.+...-
T Consensus 12 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGG-SGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56677777765 4444444 44465 8999999988777665555443 44688889998775321
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 90 ~g~id~lv~nAg~ 102 (267)
T 1iy8_A 90 FGRIDGFFNNAGI 102 (267)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 147999987643
No 410
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.60 E-value=0.24 Score=37.73 Aligned_cols=65 Identities=17% Similarity=0.241 Sum_probs=44.9
Q ss_pred CeEEEecCCcchHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----CcccEEEECC
Q 031325 50 KVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----GHVDTVVMNP 121 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----~~~D~i~~~~ 121 (161)
.+|+=+|| |..+..+++. ....|+.+|.+++.++.+...+ ++..+.||..+...- ...|++++-.
T Consensus 4 M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 4 MKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 35555555 5566666653 2348999999999988766544 478899999886431 2789998833
No 411
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=91.57 E-value=0.9 Score=31.04 Aligned_cols=72 Identities=24% Similarity=0.377 Sum_probs=47.4
Q ss_pred CCCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC-------CCccc
Q 031325 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-------RGHVD 115 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-------~~~~D 115 (161)
.+++++|=.|++.| ++..+ ++.|. +|+.++.++..++...+.+.. ++.+...|+.+... ....|
T Consensus 12 ~~~k~vlVTGas~g-IG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITGASSG-IGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKD---NYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCS---SEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhcc---CccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 45677887776554 44444 44565 899999998877766554432 57888888876432 11689
Q ss_pred EEEECCCC
Q 031325 116 TVVMNPPF 123 (161)
Q Consensus 116 ~i~~~~p~ 123 (161)
+++.+.-.
T Consensus 87 ~li~~Ag~ 94 (249)
T 3f9i_A 87 ILVCNAGI 94 (249)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 99987654
No 412
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.44 E-value=0.51 Score=34.22 Aligned_cols=87 Identities=16% Similarity=0.133 Sum_probs=54.4
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEEC
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMN 120 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~ 120 (161)
.....++++||-.|+|. |..++.+++. |. +|++++.+++..+.+++ .|....+ .+...+. ..+|+|+-.
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~~v~--~~~~~~~--~~~D~vid~ 241 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGVKHFY--TDPKQCK--EELDFIIST 241 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTCSEEE--SSGGGCC--SCEEEEEEC
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCCCeec--CCHHHHh--cCCCEEEEC
Confidence 34566889999999864 5666667765 55 99999999998887754 3432222 3332221 168998863
Q ss_pred CCCCCCCCCcchHHHHHHHhhcCCcE
Q 031325 121 PPFGTRKKGVDMDFLSMALKVASQAV 146 (161)
Q Consensus 121 ~p~~~~~~~~~~~~~~~~~~~~~~~~ 146 (161)
.. . . ..++.+.+.+++.+
T Consensus 242 ~g----~-~---~~~~~~~~~l~~~G 259 (348)
T 3two_A 242 IP----T-H---YDLKDYLKLLTYNG 259 (348)
T ss_dssp CC----S-C---CCHHHHHTTEEEEE
T ss_pred CC----c-H---HHHHHHHHHHhcCC
Confidence 32 1 1 24556667776433
No 413
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=91.41 E-value=0.86 Score=31.00 Aligned_cols=74 Identities=24% Similarity=0.316 Sum_probs=46.4
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEE-eCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~-D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
+++++|=.|++ |.++..++ +.|. +|+++ +.++...+...+.+...+.++.++.+|+.+...-
T Consensus 4 ~~~~vlItGas-ggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSS-RGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-chHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 45677766654 55555554 4465 88888 5666666655555555455788899999775321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 82 ~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 82 GRIDILVNNAGI 93 (247)
T ss_dssp SCCCEEEECC--
T ss_pred CCCCEEEECCCC
Confidence 157999987643
No 414
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.36 E-value=0.68 Score=33.98 Aligned_cols=45 Identities=27% Similarity=0.342 Sum_probs=34.9
Q ss_pred cCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 44 FGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
....++++||-.|+|. |..++.+++. |. +|++++.+++.++.+++
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 3556789999999874 5666667765 55 79999999999888765
No 415
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=91.36 E-value=1.5 Score=30.38 Aligned_cols=75 Identities=16% Similarity=0.155 Sum_probs=50.7
Q ss_pred CCCCeEEEecCCcchHHHH----HHHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccccCC----------
Q 031325 47 VSNKVVADFGCGCGTLGAA----ATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~---------- 111 (161)
..++++|=.|++.| ++.. +++.|. +|+.++. ++...+...+.++..+.++.++.+|+.+...-
T Consensus 27 l~~k~vlITGas~g-IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 27 FTGKNVLITGASKG-IGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CSCCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 35667777776654 4444 444565 8888887 56666666666666666788999999775321
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 105 ~g~id~li~nAg~ 117 (271)
T 4iin_A 105 DGGLSYLVNNAGV 117 (271)
T ss_dssp HSSCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 158999987654
No 416
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=91.34 E-value=1.7 Score=29.30 Aligned_cols=74 Identities=24% Similarity=0.290 Sum_probs=49.3
Q ss_pred CCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHh-hcCCceEEEEcccccccC-----C------C
Q 031325 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAA-DLELDIDFVQCDIRNLEW-----R------G 112 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~-----~------~ 112 (161)
++++|=.|++ |+++..++ +.|. +|+.++.++..++.+.+.+. ..+.++.++.+|+.+... . +
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 3566666654 44555544 4465 89999999888776665554 445578899999977532 1 1
Q ss_pred cccEEEECCCCC
Q 031325 113 HVDTVVMNPPFG 124 (161)
Q Consensus 113 ~~D~i~~~~p~~ 124 (161)
..|+++.+.-..
T Consensus 80 ~id~li~~Ag~~ 91 (235)
T 3l77_A 80 DVDVVVANAGLG 91 (235)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCccc
Confidence 579999886543
No 417
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=91.23 E-value=1.8 Score=29.86 Aligned_cols=74 Identities=24% Similarity=0.252 Sum_probs=48.8
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhc-CCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADL-ELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~~----------- 111 (161)
+++++|=.|++ |.++..++ +.|. +|++++.++..++.+.+.+... +.++.++.+|+.+...-
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45677766655 44555444 4465 8999999988776655555433 44688889998775321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 157999987653
No 418
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=91.23 E-value=0.83 Score=31.66 Aligned_cols=70 Identities=23% Similarity=0.287 Sum_probs=47.6
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC-------CCcccE
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-------RGHVDT 116 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-------~~~~D~ 116 (161)
++|+++|--|++.|. ++..+++.|. +|+.+|.+++.++. ..+.++..+..|+.+... ....|+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi 81 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFEALPRLDV 81 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 478888888888773 4455556666 99999998765442 112267888888876432 127899
Q ss_pred EEECCCC
Q 031325 117 VVMNPPF 123 (161)
Q Consensus 117 i~~~~p~ 123 (161)
++.|.-.
T Consensus 82 LVNNAGi 88 (242)
T 4b79_A 82 LVNNAGI 88 (242)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9987543
No 419
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=91.21 E-value=0.68 Score=32.59 Aligned_cols=72 Identities=22% Similarity=0.263 Sum_probs=47.6
Q ss_pred CCCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-------Cccc
Q 031325 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-------GHVD 115 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-------~~~D 115 (161)
.+++++|=.|++. +++..+ ++.|. +|+.++.++...+.+.+.+ +-++.++.+|+.+...- ...|
T Consensus 14 l~gk~vlVTGas~-gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 14 FAQRTVVITGANS-GLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CTTCEEEEECCSS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEeCCCC-hHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4667777777654 444444 44565 9999999987766554333 33688999998775421 1579
Q ss_pred EEEECCCC
Q 031325 116 TVVMNPPF 123 (161)
Q Consensus 116 ~i~~~~p~ 123 (161)
+++.|.-.
T Consensus 89 ~lv~nAg~ 96 (291)
T 3rd5_A 89 VLINNAGI 96 (291)
T ss_dssp EEEECCCC
T ss_pred EEEECCcC
Confidence 99987543
No 420
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.10 E-value=0.56 Score=33.94 Aligned_cols=92 Identities=22% Similarity=0.163 Sum_probs=55.2
Q ss_pred CCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEc-cccc----ccCCCcccEE
Q 031325 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQC-DIRN----LEWRGHVDTV 117 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~----~~~~~~~D~i 117 (161)
...++++|+-.|+|. |..++.+++. +..+|+++|.+++..+.+++ .|....+-.. +..+ ......+|++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~v~~~t~g~g~d~v 243 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADAAVKSGAGAADAIRELTGGQGATAV 243 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSEEEECSTTHHHHHHHHHGGGCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCEEEcCCCcHHHHHHHHhCCCCCeEE
Confidence 456788999999864 6666777764 46699999999999888765 3432111111 1111 0011168888
Q ss_pred EECCCCCCCCCCcchHHHHHHHhhcCCcEEE
Q 031325 118 VMNPPFGTRKKGVDMDFLSMALKVASQAVYS 148 (161)
Q Consensus 118 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (161)
+-... ....++.+.+.+++.+.+
T Consensus 244 ~d~~G--------~~~~~~~~~~~l~~~G~i 266 (345)
T 3jv7_A 244 FDFVG--------AQSTIDTAQQVVAVDGHI 266 (345)
T ss_dssp EESSC--------CHHHHHHHHHHEEEEEEE
T ss_pred EECCC--------CHHHHHHHHHHHhcCCEE
Confidence 86322 124677778887743333
No 421
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=91.08 E-value=0.61 Score=32.52 Aligned_cols=74 Identities=23% Similarity=0.234 Sum_probs=47.5
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++.| ++.. +++.|. +|+.++.++...+...+.+...+.++.++.+|+.+...- .
T Consensus 33 ~~k~vlITGasgg-IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 33 KGKVASVTGSSGG-IGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp TTCEEEETTTTSS-HHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 5667777776544 4444 444565 899999887655555444444444688899998765321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+...
T Consensus 111 ~id~li~~Ag~ 121 (279)
T 3ctm_A 111 TIDVFVANAGV 121 (279)
T ss_dssp CCSEEEECGGG
T ss_pred CCCEEEECCcc
Confidence 38999987543
No 422
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=91.05 E-value=2.1 Score=29.68 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=49.1
Q ss_pred CCCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHH-hhcCCceEEEEcccccccCC----------
Q 031325 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENA-ADLELDIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~---------- 111 (161)
..++++|=.|++ |+++..++ +.|. +|+.++.++..++...+.+ ...+.++.++.+|+.+...-
T Consensus 19 l~~k~~lVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 19 LRGRVALVTGGS-RGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356677777655 44555544 4465 8999999987776655544 33344678888998775321
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 97 ~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 97 FGKLDTVVNAAGI 109 (267)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 157999987654
No 423
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=91.03 E-value=1.8 Score=30.93 Aligned_cols=76 Identities=26% Similarity=0.306 Sum_probs=49.9
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccccCC
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEWR 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 111 (161)
..++++|=.|++.|. ++..+++.|. +|+.+|.+ +..++.....+...+.++.++.+|+.+...-
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 356677777766552 3334445565 89999876 5666655555555566788999999775321
Q ss_pred -----------CcccEEEECCCC
Q 031325 112 -----------GHVDTVVMNPPF 123 (161)
Q Consensus 112 -----------~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 158999987654
No 424
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.93 E-value=1.7 Score=30.06 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=50.4
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEE-eCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~-D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
..++++|=.|++.|. ++..+++.|. +|+.+ +.++...+.+...+...+.++.++.+|+.+...-
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 356788877766652 3344455566 77776 7777777777666666565788999999875421
Q ss_pred CcccEEEECCC
Q 031325 112 GHVDTVVMNPP 122 (161)
Q Consensus 112 ~~~D~i~~~~p 122 (161)
...|+++.|.-
T Consensus 85 g~id~lv~nAg 95 (259)
T 3edm_A 85 GEIHGLVHVAG 95 (259)
T ss_dssp CSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 15799998763
No 425
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=90.92 E-value=0.2 Score=35.57 Aligned_cols=79 Identities=14% Similarity=0.127 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHhhcCCceEEEEcccccccCCC-cccEEEECCCC--------------CCCCCCcchHHHHHHHhhcC
Q 031325 79 IDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPF--------------GTRKKGVDMDFLSMALKVAS 143 (161)
Q Consensus 79 ~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~i~~~~p~--------------~~~~~~~~~~~~~~~~~~~~ 143 (161)
.+.+.+..+.+.++. +.+.+.|..+....- .=|+|++|||| ......++.+..+.+..+-+
T Consensus 143 ~~~~~l~~~~~~l~~----v~i~~~Df~~~i~~~~~~~fvY~DPPY~~~~~~~~f~~Y~~~~F~~~dh~~L~~~l~~l~~ 218 (278)
T 2g1p_A 143 FPEAELYHFAEKAQN----AFFYCESYADSMARADDSSVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE 218 (278)
T ss_dssp CCHHHHHHHHHHGGG----EEEEECCHHHHHTTCCTTEEEEECCSCCCC-----------CCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCC----cEEEeCCHHHHHHhcCCCCEEEeCCcccccCCCCCccccccCCCCHHHHHHHHHHHHHHHh
Q ss_pred CcEEEEeccCcccccccC
Q 031325 144 QAVYSLHKTSTREVSRSV 161 (161)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~ 161 (161)
+++.++...+..+.++++
T Consensus 219 ~~~~~~lS~~d~~~i~~l 236 (278)
T 2g1p_A 219 RHIPVLISNHDTMLTREW 236 (278)
T ss_dssp TTCCEEEEEECCHHHHHH
T ss_pred cCCeEEEEcCCCHHHHHH
No 426
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=90.90 E-value=1.8 Score=30.11 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=50.3
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
.++++|=.|++.| ++.. +++.|. +|+.++. ++...+...+.+...+.++.++.+|+.+...-
T Consensus 27 ~~k~vlVTGas~g-IG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRG-IGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5667777766544 4444 445565 8888887 67777766666666565788999999875421
Q ss_pred CcccEEEECCCCC
Q 031325 112 GHVDTVVMNPPFG 124 (161)
Q Consensus 112 ~~~D~i~~~~p~~ 124 (161)
...|+++.|.-..
T Consensus 105 g~id~lv~nAg~~ 117 (269)
T 4dmm_A 105 GRLDVLVNNAGIT 117 (269)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1579999886543
No 427
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=90.86 E-value=2.3 Score=29.63 Aligned_cols=75 Identities=17% Similarity=0.172 Sum_probs=50.1
Q ss_pred CCCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccccC
Q 031325 47 VSNKVVADFGCGCGTLGAA----ATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEW 110 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 110 (161)
..++++|=.|++.| ++.. +++.|. +|+.+|.+ ...++.....+...+.++.++.+|+.+...
T Consensus 8 l~~k~~lVTGas~g-IG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 8 FEGKTALITGGARG-MGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCch-HHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 35677887776655 4444 445565 89999986 555555555555555578899999987532
Q ss_pred C-----------CcccEEEECCCC
Q 031325 111 R-----------GHVDTVVMNPPF 123 (161)
Q Consensus 111 ~-----------~~~D~i~~~~p~ 123 (161)
- ...|+++.|.-.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 1 158999987654
No 428
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=90.78 E-value=1.6 Score=30.09 Aligned_cols=73 Identities=19% Similarity=0.213 Sum_probs=49.3
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEE-eCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~-D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
+++++|=.|++ |+++..+ ++.|. +|+.+ +.++...+...+.+...+.++.++.+|+.+...-
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCC-chHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35667766655 4455444 44565 77665 8888887777777766666788999999875421
Q ss_pred CcccEEEECCC
Q 031325 112 GHVDTVVMNPP 122 (161)
Q Consensus 112 ~~~D~i~~~~p 122 (161)
...|+++.|.-
T Consensus 81 g~id~lv~nAg 91 (258)
T 3oid_A 81 GRLDVFVNNAA 91 (258)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 15699998864
No 429
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.74 E-value=1.3 Score=33.42 Aligned_cols=74 Identities=20% Similarity=0.060 Sum_probs=44.6
Q ss_pred CCCeEEEecCCcchHHHH--HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCCC
Q 031325 48 SNKVVADFGCGCGTLGAA--ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~--la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~~ 124 (161)
.+++|+=+|.|..+.+.. ++++|. .|++.|..+.......+.++..| +.+..+...+......+|+|+.+|-..
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~~~~~~~~L~~~g--i~~~~g~~~~~~~~~~~d~vv~spgi~ 83 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFDENPTAQSLLEEG--IKVVCGSHPLELLDEDFCYMIKNPGIP 83 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGGGCHHHHHHHHTT--CEEEESCCCGGGGGSCEEEEEECTTSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCcccCChHHHHHHhCC--CEEEECCChHHhhcCCCCEEEECCcCC
Confidence 578999999987765443 444565 99999986532111223445555 556665443211111389999987753
No 430
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=90.61 E-value=2.1 Score=29.35 Aligned_cols=72 Identities=21% Similarity=0.217 Sum_probs=48.0
Q ss_pred CeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------Ccc
Q 031325 50 KVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GHV 114 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~~~ 114 (161)
+++|=.|++ |.++..++ +.|. +|+.++.++...+...+.+...+.++.++.+|+.+...- ...
T Consensus 3 k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVTGAG-QGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 456666654 55555554 4455 899999998877766665555454678889998775321 158
Q ss_pred cEEEECCCC
Q 031325 115 DTVVMNPPF 123 (161)
Q Consensus 115 D~i~~~~p~ 123 (161)
|+++.|.-.
T Consensus 81 d~lv~nAg~ 89 (256)
T 1geg_A 81 DVIVNNAGV 89 (256)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987643
No 431
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=90.61 E-value=0.46 Score=33.28 Aligned_cols=28 Identities=21% Similarity=0.345 Sum_probs=22.8
Q ss_pred ceEEEEcccccccCCCcccEEEECCCCCC
Q 031325 97 DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (161)
Q Consensus 97 ~~~~~~~d~~~~~~~~~~D~i~~~~p~~~ 125 (161)
++++.+.|..+.. ...=|++++||||..
T Consensus 149 ~v~i~~~Df~~~i-~~~~~fvY~DPPY~~ 176 (259)
T 1yf3_A 149 KIIFSSLHFKDVK-ILDGDFVYVDPPYLI 176 (259)
T ss_dssp GEEEECCCGGGCC-CCTTEEEEECCCCTT
T ss_pred CCEEEcCCHHHHh-CCCCeEEEECCCCCC
Confidence 5899999999875 335589999999965
No 432
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.54 E-value=2.2 Score=29.99 Aligned_cols=73 Identities=18% Similarity=0.219 Sum_probs=48.7
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChH-HHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSD-SLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~-~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
+++++|=.|++.| ++.. +++.|. +|+.++.++. ..+...+.+...+.++.++.+|+.+...-
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5677887776655 4444 444565 8999998765 44555555555565788999999875321
Q ss_pred CcccEEEECCC
Q 031325 112 GHVDTVVMNPP 122 (161)
Q Consensus 112 ~~~D~i~~~~p 122 (161)
...|+++.|.-
T Consensus 124 g~iD~lvnnAg 134 (291)
T 3ijr_A 124 GSLNILVNNVA 134 (291)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 15799998754
No 433
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=90.46 E-value=1.8 Score=29.43 Aligned_cols=74 Identities=24% Similarity=0.301 Sum_probs=49.8
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.| |+|.++..+++ .|. +|++++.++...+...+.+...+-++.++.+|+.+...- .
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 456677665 55666666554 354 899999998877666555555444678888998764321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+...
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999987653
No 434
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.41 E-value=0.99 Score=32.97 Aligned_cols=46 Identities=22% Similarity=0.166 Sum_probs=34.9
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
.....++++||-.|+|. |..++.+++. |. +|++++.++..++.+++
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFA 231 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHH
Confidence 34556789999999764 5566666665 55 99999999998888755
No 435
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.37 E-value=1.1 Score=32.56 Aligned_cols=46 Identities=26% Similarity=0.280 Sum_probs=34.6
Q ss_pred hcCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
.....++++||-.|+|. |..++.+++. |. +|+++|.+++..+.+++
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN 210 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH
Confidence 34556789999999864 5566666664 55 69999999998887754
No 436
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=90.35 E-value=1.7 Score=30.69 Aligned_cols=75 Identities=21% Similarity=0.209 Sum_probs=51.3
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCC--CeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccccCC--------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGA--DQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEWR-------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~--~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~~~-------- 111 (161)
.++++|=.|++.| ++..++ +.|. .+|+.++.++..++.+.+.+... +.++.++.+|+.+...-
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 5678887776655 444444 4443 38999999998888777666553 33688899999875431
Q ss_pred ---CcccEEEECCCC
Q 031325 112 ---GHVDTVVMNPPF 123 (161)
Q Consensus 112 ---~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 111 ~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 111 QEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGCSCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 158999987653
No 437
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=90.32 E-value=1.7 Score=30.42 Aligned_cols=71 Identities=17% Similarity=0.378 Sum_probs=48.4
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~----------- 111 (161)
.++++|=.|++ |+++..++ +.|. +|++++.++..++.....+...+- ++.++.+|+.+...-
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 45677766654 55555554 4465 899999998887766665555443 678889998774321
Q ss_pred CcccEEEEC
Q 031325 112 GHVDTVVMN 120 (161)
Q Consensus 112 ~~~D~i~~~ 120 (161)
...|+++.+
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 158999987
No 438
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.29 E-value=0.77 Score=34.10 Aligned_cols=46 Identities=28% Similarity=0.216 Sum_probs=34.6
Q ss_pred CCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHH
Q 031325 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~ 90 (161)
...++++||-.|+|. |..++.+++. |..+|+++|.++..++.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 456788999999853 4566666664 555999999999999887653
No 439
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=90.24 E-value=2.2 Score=29.06 Aligned_cols=74 Identities=26% Similarity=0.280 Sum_probs=48.5
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
.++++|=.|+ +|.++..+++ .|. +|+.++. ++...+...+.+...+.++.++.+|+.+...-
T Consensus 3 ~~k~vlVTGa-s~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 3 KGKVALVTGA-SRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4566765554 4555555544 455 8999888 77777666555555455678888998775321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 81 g~id~lv~nAg~ 92 (246)
T 2uvd_A 81 GQVDILVNNAGV 92 (246)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 158999987654
No 440
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=90.20 E-value=2 Score=29.42 Aligned_cols=74 Identities=24% Similarity=0.239 Sum_probs=49.7
Q ss_pred CCCeEEEecCCcchHHHHHH----H-cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----L-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
+++++|=.| |+|.++..++ + .|. +|++++.++...+...+.+...+.++.++.+|+.+...-
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 355677555 5565665554 4 454 899999998877766666665555688899998775321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 157999987543
No 441
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.19 E-value=1.3 Score=28.79 Aligned_cols=65 Identities=22% Similarity=0.362 Sum_probs=41.5
Q ss_pred CCeEEEecCCcchHHHHH----HHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc---C---CCcccEE
Q 031325 49 NKVVADFGCGCGTLGAAA----TLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE---W---RGHVDTV 117 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~l----a~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~---~~~~D~i 117 (161)
+.+|+=+|+| .++..+ .+. +. .|+++|.++..++.++. .+ +.++.+|..+.. . ...+|+|
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~----~g--~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS----EG--RNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH----TT--CCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH----CC--CCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 5678888875 344333 344 55 89999999988776543 23 456777765421 1 1268999
Q ss_pred EECCC
Q 031325 118 VMNPP 122 (161)
Q Consensus 118 ~~~~p 122 (161)
+...|
T Consensus 110 i~~~~ 114 (183)
T 3c85_A 110 LLAMP 114 (183)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 88555
No 442
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=90.13 E-value=2.2 Score=29.33 Aligned_cols=74 Identities=19% Similarity=0.152 Sum_probs=49.1
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC------------
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR------------ 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~------------ 111 (161)
.++++|=.|+ +|.++..+++ .|. +|++++.++..++.....+...+.++.++.+|+.+...-
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4566776665 5555555544 455 899999998877766665555555688888998764321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 246999987543
No 443
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.11 E-value=0.49 Score=32.20 Aligned_cols=64 Identities=9% Similarity=0.037 Sum_probs=43.2
Q ss_pred CCeEEEecCCcchHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC---C--CcccEEEEC
Q 031325 49 NKVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---R--GHVDTVVMN 120 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~--~~~D~i~~~ 120 (161)
..+++=+|+ |..+..+++. ... |+++|.++..++.++ . .+.++.+|..+... . ...|.+++.
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 357887776 5666666653 123 999999998876554 2 36889999876431 1 278999885
Q ss_pred CC
Q 031325 121 PP 122 (161)
Q Consensus 121 ~p 122 (161)
.+
T Consensus 79 ~~ 80 (234)
T 2aef_A 79 LE 80 (234)
T ss_dssp CS
T ss_pred CC
Confidence 55
No 444
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=90.07 E-value=2.3 Score=29.22 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=51.0
Q ss_pred CCCeEEEecCCcc---hHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc--C-CceEEEEcccccccCC----------
Q 031325 48 SNKVVADFGCGCG---TLGAAATLLGADQVIAIDIDSDSLELASENAADL--E-LDIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G---~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~--~-~~~~~~~~d~~~~~~~---------- 111 (161)
.++++|=.|++.| .++..+++.|. +|+.++.++..++.+.+.+... + .++.++.+|+.+...-
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 4667777776655 23344445566 8999999998887777666543 2 2678899999875321
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 158999987654
No 445
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=89.98 E-value=2.3 Score=29.91 Aligned_cols=60 Identities=18% Similarity=0.081 Sum_probs=41.0
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEe-CChHHHHHHHHHHh-hcCCceEEEEccccccc
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAID-IDSDSLELASENAA-DLELDIDFVQCDIRNLE 109 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D-~~~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~ 109 (161)
.++++|-.|++ |+++..++ +.|. +|+.++ .++..++.+.+.+. ..+.++.++.+|+.+..
T Consensus 8 ~~k~~lVTGas-~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAA-KRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcc
Confidence 45667766655 44555544 4465 899999 99887776666554 33446888999998765
No 446
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=89.80 E-value=2.5 Score=29.69 Aligned_cols=74 Identities=30% Similarity=0.402 Sum_probs=48.9
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhc-CCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADL-ELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~~----------- 111 (161)
.++++|=.|++ |.++..++ +.|. +|++++.++..++...+.+... +.++.++.+|+.+...-
T Consensus 25 ~~k~vlITGas-ggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITGGG-TGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 45677777654 55555544 4455 8999999988776655555433 44688999999765321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 103 g~id~li~~Ag~ 114 (302)
T 1w6u_A 103 GHPNIVINNAAG 114 (302)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 146999987653
No 447
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=89.80 E-value=2.1 Score=29.38 Aligned_cols=73 Identities=18% Similarity=0.173 Sum_probs=47.2
Q ss_pred CCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHH--HHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 49 NKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDS--LELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~--~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
++++|=.|++ |.++..+ ++.|. +|+.++.++.. ++...+.+...+.++.++.+|+.+...-
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGA-QGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3566666655 4455544 44565 89999988776 5555555554444688899998775321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 80 g~iD~lv~nAg~ 91 (258)
T 3a28_C 80 GGFDVLVNNAGI 91 (258)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 157999987654
No 448
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=89.66 E-value=2.5 Score=29.29 Aligned_cols=68 Identities=21% Similarity=0.170 Sum_probs=44.7
Q ss_pred CeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------Cccc
Q 031325 50 KVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GHVD 115 (161)
Q Consensus 50 ~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~~~D 115 (161)
+++|=-|++.|. ++..+++.|. +|+.+|.+++..+...+ .+-++..+.+|+.+...- ...|
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 567766766662 3444555565 99999999876654322 223688899999875321 2689
Q ss_pred EEEECCC
Q 031325 116 TVVMNPP 122 (161)
Q Consensus 116 ~i~~~~p 122 (161)
+++.|.-
T Consensus 78 iLVNNAG 84 (247)
T 3ged_A 78 VLVNNAC 84 (247)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998764
No 449
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=89.61 E-value=1.6 Score=30.56 Aligned_cols=73 Identities=15% Similarity=0.185 Sum_probs=48.6
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|++ |.++..++ +.|. +|+.++.++..++...+.+...+ ++.++.+|+.+...- .
T Consensus 28 ~~k~vlVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 28 AGRIALVTGGS-RGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 56677777765 44555444 4455 89999999887776655555444 677888888764321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 105 ~iD~lvnnAg~ 115 (276)
T 2b4q_A 105 RLDILVNNAGT 115 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987643
No 450
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=89.59 E-value=3.3 Score=29.05 Aligned_cols=73 Identities=25% Similarity=0.318 Sum_probs=49.3
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhh-----cCCceEEEEcccccccCC-------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAAD-----LELDIDFVQCDIRNLEWR------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~~~~------- 111 (161)
.++++|=.|+ +|.++..++ +.|. +|++++.++..++.+.+.+.. .+.++.++.+|+.+...-
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 4667877775 455555554 4455 899999998877766655544 233688999998765321
Q ss_pred ----CcccEEEECCC
Q 031325 112 ----GHVDTVVMNPP 122 (161)
Q Consensus 112 ----~~~D~i~~~~p 122 (161)
...|+++.+.-
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 14899998765
No 451
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=89.43 E-value=2.3 Score=29.51 Aligned_cols=74 Identities=12% Similarity=0.089 Sum_probs=48.3
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeC-ChHHHHHHHHHHhhc-CCceEEEEcccccc----cCC------
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDI-DSDSLELASENAADL-ELDIDFVQCDIRNL----EWR------ 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~-~~~~~~~a~~~~~~~-~~~~~~~~~d~~~~----~~~------ 111 (161)
.++++|=.|+ +|.++..+++ .|. +|+.++. ++..++.+.+.+... +.++.++.+|+.+. ..-
T Consensus 10 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 10 ECPAAVITGG-ARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp -CCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 4566775555 4555555544 455 8999999 887776665555443 44688899999876 221
Q ss_pred -----CcccEEEECCCC
Q 031325 112 -----GHVDTVVMNPPF 123 (161)
Q Consensus 112 -----~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 88 ~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 147999987653
No 452
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=89.41 E-value=3.6 Score=29.88 Aligned_cols=76 Identities=18% Similarity=0.170 Sum_probs=49.0
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHH-------HHHHHHHHhhcCCceEEEEcccccccCC-----
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDS-------LELASENAADLELDIDFVQCDIRNLEWR----- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~-------~~~a~~~~~~~~~~~~~~~~d~~~~~~~----- 111 (161)
..++++|=.|++.|. ++..+++.|. +|+.++.++.. ++.+.+.+...+-++.++.+|+.+...-
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 356778877766552 3334444565 89999987653 4444445555555788899999875421
Q ss_pred ------CcccEEEECCCC
Q 031325 112 ------GHVDTVVMNPPF 123 (161)
Q Consensus 112 ------~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 122 ~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 168999987654
No 453
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=89.37 E-value=2.6 Score=29.43 Aligned_cols=74 Identities=20% Similarity=0.165 Sum_probs=49.2
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.++++|=.|+ +|.++..+++ .|. +|++++.++...+...+.+...+.++.++.+|+.+...- .
T Consensus 43 ~~k~vlITGa-sggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGA-GRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEEST-TSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3556776665 4656666554 344 888889888777766666655555788889998765321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+.-.
T Consensus 121 ~id~li~~Ag~ 131 (285)
T 2c07_A 121 NVDILVNNAGI 131 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987654
No 454
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=89.28 E-value=1.4 Score=31.74 Aligned_cols=49 Identities=35% Similarity=0.363 Sum_probs=35.7
Q ss_pred HhhcCCCCCCeEEEecCCcc-hHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 41 ENSFGDVSNKVVADFGCGCG-TLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 41 ~~~~~~~~~~~vlD~g~G~G-~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
.......++++|+-.|+|.. .+++.+++. |...++++|.+++.++.+++
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH
Confidence 33445668899999998754 355555554 66688999999998887765
No 455
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.20 E-value=2.9 Score=29.02 Aligned_cols=74 Identities=20% Similarity=0.277 Sum_probs=49.6
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccccCC----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~---------- 111 (161)
+++++|-.|+ +|.++..++ +.|. +|++++.++..++.....+...+. ++.++.+|+.+...-
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4567776665 455555554 4455 899999998877766666655543 577888998775321
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
..+|+++.+...
T Consensus 109 ~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 109 HSGVDICINNAGL 121 (279)
T ss_dssp HCCCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 158999987654
No 456
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=89.15 E-value=2.5 Score=29.01 Aligned_cols=74 Identities=18% Similarity=0.256 Sum_probs=48.9
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccc--ccccC----------
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI--RNLEW---------- 110 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~--~~~~~---------- 110 (161)
.++++|=.|++.| ++.. +++.|. +|+.++.++..++.+.+.+...+- ++.++..|+ .+...
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 5677777776554 4444 444565 899999998888777666654433 678888888 43321
Q ss_pred -CCcccEEEECCCC
Q 031325 111 -RGHVDTVVMNPPF 123 (161)
Q Consensus 111 -~~~~D~i~~~~p~ 123 (161)
....|+++.|.-.
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 1158999987653
No 457
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=89.15 E-value=1.6 Score=30.69 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=48.3
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~----------- 111 (161)
+++++|=.|++ |+++..++ +.|. +|+.++.++..++.+.+.+...+- .+.++.+|+.+...-
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56677766655 44555444 4465 899999999887776666554333 358889999875421
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 157999987654
No 458
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=89.08 E-value=1.7 Score=31.04 Aligned_cols=74 Identities=22% Similarity=0.291 Sum_probs=49.6
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCC----------hHHHHHHHHHHhhcCCceEEEEcccccccCC--
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDID----------SDSLELASENAADLELDIDFVQCDIRNLEWR-- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~----------~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-- 111 (161)
.++++|=.|++.| ++.. +++.|. +|+.+|.+ +...+.....+...+.++.++.+|+.+...-
T Consensus 26 ~gk~vlVTGas~G-IG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 26 DGRVVIVTGAGGG-IGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 5677777776554 4444 445565 99999887 5666666666666555788888998775321
Q ss_pred ---------CcccEEEECCCC
Q 031325 112 ---------GHVDTVVMNPPF 123 (161)
Q Consensus 112 ---------~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 157999987654
No 459
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=89.04 E-value=2.8 Score=28.86 Aligned_cols=74 Identities=23% Similarity=0.199 Sum_probs=48.9
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
+++++|=.| |+|.++..+++ .|. +|++++. ++...+.....+...+.++.++.+|+.+...-
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 456777665 45666665554 455 8998888 77776666555555555788899998775321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+...
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 157999887654
No 460
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.97 E-value=3.2 Score=28.16 Aligned_cols=74 Identities=20% Similarity=0.269 Sum_probs=49.3
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccc--ccccC----------
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI--RNLEW---------- 110 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~--~~~~~---------- 110 (161)
+++++|=.|++ |.++..+ ++.|. +|+.++.++..++.....+...+. +..++..|+ .+...
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 56677777765 4444444 44565 899999999988887777766553 667777776 33211
Q ss_pred -CCcccEEEECCCC
Q 031325 111 -RGHVDTVVMNPPF 123 (161)
Q Consensus 111 -~~~~D~i~~~~p~ 123 (161)
.+..|+++.+.-.
T Consensus 91 ~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 91 EFGRLDGLLHNASI 104 (247)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 0157999988654
No 461
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.94 E-value=3.6 Score=27.14 Aligned_cols=83 Identities=20% Similarity=0.225 Sum_probs=49.7
Q ss_pred eEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC--CcccEEEECCCCC
Q 031325 51 VVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR--GHVDTVVMNPPFG 124 (161)
Q Consensus 51 ~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~p~~ 124 (161)
+||=.| |+|.++..+++ .|. +|++++.++...+... .++.++.+|+.+.... ..+|+|+.+....
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-------KDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-------SSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-------CCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 455444 45666655544 454 9999999887654321 2578999999876442 1789999876543
Q ss_pred CCCCCcchHHHHHHHhhc
Q 031325 125 TRKKGVDMDFLSMALKVA 142 (161)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~ 142 (161)
.............+.+.+
T Consensus 73 ~~~~~~~~~~~~~l~~a~ 90 (221)
T 3ew7_A 73 PDEAEKHVTSLDHLISVL 90 (221)
T ss_dssp TTTTTSHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHH
Confidence 322333334444444444
No 462
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=88.84 E-value=2.9 Score=29.16 Aligned_cols=75 Identities=24% Similarity=0.296 Sum_probs=47.1
Q ss_pred CCCCeEEEecCCcc---hHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC----------Cc
Q 031325 47 VSNKVVADFGCGCG---TLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------GH 113 (161)
Q Consensus 47 ~~~~~vlD~g~G~G---~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------~~ 113 (161)
..++++|=.|++.| .++..+++.|. +|+.++.++..-+ ....+...+.++.++.+|+.+...- ..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKE-VADEIADGGGSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHH-HHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 35777887776655 23444455565 8999995544433 3344444444788899999775321 15
Q ss_pred ccEEEECCCC
Q 031325 114 VDTVVMNPPF 123 (161)
Q Consensus 114 ~D~i~~~~p~ 123 (161)
.|+++.|.-.
T Consensus 107 iD~lv~nAg~ 116 (273)
T 3uf0_A 107 VDVLVNNAGI 116 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 7999987554
No 463
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=88.84 E-value=2.5 Score=29.40 Aligned_cols=68 Identities=18% Similarity=0.233 Sum_probs=46.4
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC----------Cc
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------GH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------~~ 113 (161)
.++++|=.|++.| ++.. +++.|. +|+.++.++..++.+.+.+ +-++.++.+|+.+...- ..
T Consensus 29 ~~k~vlVTGas~G-IG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGG-LGEATVRRLHADGL-GVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp TTEEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 5667777776555 4444 445565 8999999988777665554 33688999998765321 15
Q ss_pred ccEEEEC
Q 031325 114 VDTVVMN 120 (161)
Q Consensus 114 ~D~i~~~ 120 (161)
.|+++.+
T Consensus 104 id~lv~~ 110 (281)
T 3ppi_A 104 LRYAVVA 110 (281)
T ss_dssp EEEEEEC
T ss_pred CCeEEEc
Confidence 7888877
No 464
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.67 E-value=3.5 Score=28.95 Aligned_cols=98 Identities=21% Similarity=0.249 Sum_probs=55.3
Q ss_pred CeEEEecCCcc--hHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc---------CC----------ceEEEEcccccc
Q 031325 50 KVVADFGCGCG--TLGAAATLLGADQVIAIDIDSDSLELASENAADL---------EL----------DIDFVQCDIRNL 108 (161)
Q Consensus 50 ~~vlD~g~G~G--~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~---------~~----------~~~~~~~d~~~~ 108 (161)
.+|.=+|+|.= .++..+++.|. +|+.+|.+++.++.+++.+... ++ ++.. ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 46777877642 23344445565 9999999999988877653211 11 1121 2232221
Q ss_pred cCCCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEeccCc
Q 031325 109 EWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTST 154 (161)
Q Consensus 109 ~~~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (161)
-...|+|+..-|- .......++..+...+++...++.+.++
T Consensus 83 --~~~aDlVi~av~~---~~~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 83 --VKDADLVIEAVPE---SLDLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp --TTTCSEEEECCCS---CHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred --hccCCEEEEeccC---cHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 1257999876551 1123446677777777755555544443
No 465
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=88.64 E-value=3.1 Score=29.86 Aligned_cols=60 Identities=18% Similarity=0.081 Sum_probs=40.6
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEe-CChHHHHHHHHHHh-hcCCceEEEEccccccc
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAID-IDSDSLELASENAA-DLELDIDFVQCDIRNLE 109 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D-~~~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~ 109 (161)
.++++|-.|++ |+++..++ +.|. +|+.++ .++..++.+.+.+. ..+.++.++.+|+.+..
T Consensus 45 ~~k~~lVTGas-~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTGAA-KRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCch
Confidence 45667766654 55555554 4465 899999 89887776666554 33446888999998765
No 466
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.58 E-value=3.8 Score=28.15 Aligned_cols=76 Identities=17% Similarity=0.193 Sum_probs=52.3
Q ss_pred CCCeEEEecCC--cc---hHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccccCC----------
Q 031325 48 SNKVVADFGCG--CG---TLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G--~G---~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~---------- 111 (161)
.++++|=.|++ +| .++..+++.|. +|+.++.++...+.+.+.....+- ++.++.+|+.+...-
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 56788888876 33 24445555565 899999888776666666665554 688999999875421
Q ss_pred -CcccEEEECCCCC
Q 031325 112 -GHVDTVVMNPPFG 124 (161)
Q Consensus 112 -~~~D~i~~~~p~~ 124 (161)
...|+++.+.-..
T Consensus 85 ~g~id~li~~Ag~~ 98 (266)
T 3oig_A 85 VGVIHGIAHCIAFA 98 (266)
T ss_dssp HSCCCEEEECCCCC
T ss_pred hCCeeEEEEccccc
Confidence 1579999876543
No 467
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=88.56 E-value=2.9 Score=28.59 Aligned_cols=74 Identities=20% Similarity=0.175 Sum_probs=48.2
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
+++++|=.|+ +|.++..+++ .|. +|++++. ++...+...+.+...+.++.++.+|+.+...-
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4566776664 5555555544 455 8999998 77766665555554444678888998764321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 84 g~id~li~~Ag~ 95 (261)
T 1gee_A 84 GKLDVMINNAGL 95 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 157999987654
No 468
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=88.50 E-value=1.9 Score=29.32 Aligned_cols=74 Identities=20% Similarity=0.161 Sum_probs=48.5
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeCC-hHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDID-SDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~-~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
.++++|-.| |+|.++..+++ .|. +|++++.+ +..++.....+...+.++.++.+|+.+...-
T Consensus 6 ~~k~vlVTG-asggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITG-SSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 456777555 45666665554 455 89999988 6666655555554454688899998875321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+...
T Consensus 84 g~id~vi~~Ag~ 95 (258)
T 3afn_B 84 GGIDVLINNAGG 95 (258)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 158999987653
No 469
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=88.48 E-value=3 Score=28.02 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=44.1
Q ss_pred eEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC--------CcccEEE
Q 031325 51 VVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR--------GHVDTVV 118 (161)
Q Consensus 51 ~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~--------~~~D~i~ 118 (161)
++|=.|++ |+++..++ +.|. +|+.++.++..++.+...+ +.++.++..|+.+...- ..+|+++
T Consensus 3 ~vlVTGas-~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 3 LIVITGAS-SGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp CEEEESTT-SHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred EEEEecCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence 45555655 44555544 4465 8999999988776554433 33678888888775321 1469999
Q ss_pred ECCCCC
Q 031325 119 MNPPFG 124 (161)
Q Consensus 119 ~~~p~~ 124 (161)
.+.-..
T Consensus 78 ~~Ag~~ 83 (230)
T 3guy_A 78 HSAGSG 83 (230)
T ss_dssp ECCCCC
T ss_pred EeCCcC
Confidence 876543
No 470
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=88.44 E-value=3.8 Score=30.31 Aligned_cols=78 Identities=21% Similarity=0.307 Sum_probs=51.9
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhc----CCceEEEEcccccccC------CCc
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADL----ELDIDFVQCDIRNLEW------RGH 113 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~------~~~ 113 (161)
.+++||=.| |+|.++..+++ .|...|++++.++..+....+.+... +.++.++.+|+.+... ...
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 356777666 55666666655 35359999999988776655544432 1368899999987532 127
Q ss_pred ccEEEECCCCCCC
Q 031325 114 VDTVVMNPPFGTR 126 (161)
Q Consensus 114 ~D~i~~~~p~~~~ 126 (161)
+|+|+....+.+.
T Consensus 113 ~D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 113 YDYVLNLSALKHV 125 (399)
T ss_dssp CSEEEECCCCCCG
T ss_pred CCEEEECCCcCCC
Confidence 8999987665443
No 471
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=88.40 E-value=3.3 Score=27.98 Aligned_cols=74 Identities=20% Similarity=0.214 Sum_probs=48.3
Q ss_pred CCCeEEEecCCcchHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhh-cCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAAD-LELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la~----~~~~~v~~~D~~~~~~~~a~~~~~~-~~~~~~~~~~d~~~~~~~----------- 111 (161)
.+++++=.|+ +|.++..+++ .|. +|++++.++...+.....+.. .+.++.++.+|+.+...-
T Consensus 6 ~~~~vlVtGa-sggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 6 QGKVSLVTGS-TRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4566776655 5555555544 455 899999998777665554443 344678888998764321
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.+...
T Consensus 84 ~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 84 DGIDILVNNAGI 95 (248)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 157999987654
No 472
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=88.26 E-value=3.7 Score=27.96 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=47.3
Q ss_pred CCeEEEecCCcchHHHHHH----HcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
++++|=.|++ |.++..++ +.|. +|+.++. ++...+...+.+...+.++.++.+|+.+...- .
T Consensus 4 ~k~~lVTGas-~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALVTGAS-RGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4566655554 55555544 4455 7877776 55666666666666666788999999775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 82 ~id~lv~nAg~ 92 (246)
T 3osu_A 82 SLDVLVNNAGI 92 (246)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987654
No 473
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=88.16 E-value=1.9 Score=29.60 Aligned_cols=71 Identities=27% Similarity=0.243 Sum_probs=45.2
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
+++++|=.|++. .++..+ ++.|. +|+.++.++...+...+.+ +.++.++..|+.+...- .
T Consensus 4 ~~k~vlVTGas~-gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 4 SGKTVIITGGAR-GLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCSEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 466777777654 444444 44555 8999999987665443332 22577888888764321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 79 ~iD~lv~nAg~ 89 (254)
T 1hdc_A 79 SVDGLVNNAGI 89 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987654
No 474
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=88.12 E-value=2.9 Score=29.22 Aligned_cols=74 Identities=18% Similarity=0.160 Sum_probs=47.8
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCCh-HHHHHHHHHHh-hcCCceEEEEccccc----ccCC------
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDS-DSLELASENAA-DLELDIDFVQCDIRN----LEWR------ 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~-~~~~~a~~~~~-~~~~~~~~~~~d~~~----~~~~------ 111 (161)
.++++|-.|++ |+++..+ ++.|. +|+.++.++ ..++.+.+.+. ..+.++.++.+|+.+ ...-
T Consensus 22 ~~k~~lVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 22 EAPAAVVTGAA-KRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 56677766655 4455444 44565 899999987 66665555544 334468889999987 3210
Q ss_pred -----CcccEEEECCCC
Q 031325 112 -----GHVDTVVMNPPF 123 (161)
Q Consensus 112 -----~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 100 ~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 157999987653
No 475
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.04 E-value=1.8 Score=31.60 Aligned_cols=82 Identities=20% Similarity=0.189 Sum_probs=48.9
Q ss_pred CCeEEEecCCcchHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC----CcccEEEECCC
Q 031325 49 NKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----GHVDTVVMNPP 122 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----~~~D~i~~~~p 122 (161)
..+|+-+||| ..+..+++. ....++..|.+...++.++. .+..+..|+.+...- ...|+|+.-.|
T Consensus 16 ~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p 86 (365)
T 3abi_A 16 HMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred ccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHHhCCCEEEEecC
Confidence 3579999984 444444332 23489999999888776543 245666777654321 26899986544
Q ss_pred CCCCCCCcchHHHHHHHhhcCC
Q 031325 123 FGTRKKGVDMDFLSMALKVASQ 144 (161)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~ 144 (161)
+. ......+.+.+...+
T Consensus 87 ~~-----~~~~v~~~~~~~g~~ 103 (365)
T 3abi_A 87 GF-----LGFKSIKAAIKSKVD 103 (365)
T ss_dssp GG-----GHHHHHHHHHHHTCE
T ss_pred Cc-----ccchHHHHHHhcCcc
Confidence 32 123555555555543
No 476
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.02 E-value=4.8 Score=28.31 Aligned_cols=75 Identities=19% Similarity=0.169 Sum_probs=50.4
Q ss_pred CCCCeEEEecCCcc-h----HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC----------
Q 031325 47 VSNKVVADFGCGCG-T----LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G-~----~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~---------- 111 (161)
..++++|=.|++.| + ++..+++.|. +|+.++.++...+.+++.....+ ++.++.+|+.+...-
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHHHHh
Confidence 46788998887643 2 4444555565 89999998766665555544444 578889999775321
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 107 ~g~iD~lVnnAG~ 119 (293)
T 3grk_A 107 WGKLDFLVHAIGF 119 (293)
T ss_dssp TSCCSEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 157999988654
No 477
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=87.96 E-value=2.4 Score=29.13 Aligned_cols=74 Identities=19% Similarity=0.255 Sum_probs=47.2
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHH-HHHHHHHHhhc-CCceEEEEcccccccCC----------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDS-LELASENAADL-ELDIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~-~~~a~~~~~~~-~~~~~~~~~d~~~~~~~---------- 111 (161)
+++++|=.|++ |.++..++ +.|. +|+.++.++.. ++...+.+... +.++.++.+|+.+...-
T Consensus 3 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 3 KGKVAVVTGST-SGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 45667766654 44555554 4455 89999988776 65555544432 44678888898775321
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 81 ~g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 81 MGRIDILVNNAGI 93 (260)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 158999987653
No 478
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=87.92 E-value=0.79 Score=33.16 Aligned_cols=88 Identities=13% Similarity=-0.061 Sum_probs=52.6
Q ss_pred CCCCCCeEEEecCCc-chHHHHHHHcC--CCeEEEEeCChHHHHHHHHHHhhcCCceEEEE----ccc-ccccCCCcccE
Q 031325 45 GDVSNKVVADFGCGC-GTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLELDIDFVQ----CDI-RNLEWRGHVDT 116 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~-G~~~~~la~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~----~d~-~~~~~~~~~D~ 116 (161)
.. ++++||-+|+|. |..++.+++.. ..+|++++.+++..+.+++. |.. .++. .|. .++.....+|+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~-~vi~~~~~~~~~~~~~~g~g~D~ 241 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GAD-YVSEMKDAESLINKLTDGLGASI 241 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TCS-EEECHHHHHHHHHHHHTTCCEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CCC-EEeccccchHHHHHhhcCCCccE
Confidence 45 789999999863 55666666642 34899999999988887652 321 1111 111 11111126899
Q ss_pred EEECCCCCCCCCCcchHHHHHHHhhcCCcE
Q 031325 117 VVMNPPFGTRKKGVDMDFLSMALKVASQAV 146 (161)
Q Consensus 117 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 146 (161)
|+-... ....++.+.+.+++.+
T Consensus 242 vid~~g--------~~~~~~~~~~~l~~~G 263 (344)
T 2h6e_A 242 AIDLVG--------TEETTYNLGKLLAQEG 263 (344)
T ss_dssp EEESSC--------CHHHHHHHHHHEEEEE
T ss_pred EEECCC--------ChHHHHHHHHHhhcCC
Confidence 986332 1246777777776433
No 479
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=87.82 E-value=2.7 Score=28.86 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=47.3
Q ss_pred CCCeEEEecCCcchHHHH----HHH---cCCCeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccccC--------
Q 031325 48 SNKVVADFGCGCGTLGAA----ATL---LGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEW-------- 110 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~---~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~~-------- 110 (161)
+++++|=.|++.| ++.. +++ .|. +|+.++.++..++...+.+... +.++.++.+|+.+...
T Consensus 5 ~~k~~lVTGas~g-IG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 5 GCAVCVLTGASRG-FGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSH-HHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCh-HHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 4556776665544 4444 444 344 9999999988777666655443 3367888999876431
Q ss_pred -----CCccc--EEEECCCC
Q 031325 111 -----RGHVD--TVVMNPPF 123 (161)
Q Consensus 111 -----~~~~D--~i~~~~p~ 123 (161)
...+| +++.|.-.
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCC
T ss_pred HhccccccCCccEEEECCcc
Confidence 01457 88887553
No 480
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=87.80 E-value=2 Score=30.11 Aligned_cols=74 Identities=22% Similarity=0.205 Sum_probs=48.5
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChH-------HHHHHHHHHhhcCCceEEEEcccccccCC-----
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSD-------SLELASENAADLELDIDFVQCDIRNLEWR----- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~-------~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----- 111 (161)
+++++|=.|++.| ++.. +++.|. +|+.++.++. .++...+.+...+.++.++.+|+.+...-
T Consensus 8 ~~k~vlVTGas~G-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 8 RGKTMFISGGSRG-IGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 5677787776655 4444 444555 8999998865 34444444555555788999999875321
Q ss_pred ------CcccEEEECCCC
Q 031325 112 ------GHVDTVVMNPPF 123 (161)
Q Consensus 112 ------~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 86 ~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 158999987654
No 481
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=87.78 E-value=4.1 Score=27.60 Aligned_cols=70 Identities=20% Similarity=0.131 Sum_probs=47.2
Q ss_pred CCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------Cc
Q 031325 49 NKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~~ 113 (161)
++++|=.|++.| ++.. +++.|. +|+.++.++..++.....+.. ++.++.+|+.+...- +.
T Consensus 3 ~k~vlVTGas~G-IG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 3 LGHIIVTGAGSG-LGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 456776776554 4444 444565 899999999888776665532 578899998775321 15
Q ss_pred ccEEEECCCC
Q 031325 114 VDTVVMNPPF 123 (161)
Q Consensus 114 ~D~i~~~~p~ 123 (161)
.|+++.|.-.
T Consensus 78 id~lvnnAg~ 87 (235)
T 3l6e_A 78 PELVLHCAGT 87 (235)
T ss_dssp CSEEEEECCC
T ss_pred CcEEEECCCC
Confidence 7999987654
No 482
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.72 E-value=0.84 Score=32.92 Aligned_cols=63 Identities=10% Similarity=0.030 Sum_probs=43.4
Q ss_pred CeEEEecCCcchHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccC---CC--cccEEEECC
Q 031325 50 KVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---RG--HVDTVVMNP 121 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~~--~~D~i~~~~ 121 (161)
.+++=+|+ |..+..+++. ... ++.+|.+++.++ ++. . .+.++.+|..+... .+ ..|.+++..
T Consensus 116 ~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~--~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 116 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----S--GANFVHGDPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----T--TCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred CCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----C--CcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence 46776665 6677777653 233 999999999887 543 2 47899999977532 12 789888854
Q ss_pred C
Q 031325 122 P 122 (161)
Q Consensus 122 p 122 (161)
+
T Consensus 186 ~ 186 (336)
T 1lnq_A 186 E 186 (336)
T ss_dssp S
T ss_pred C
Confidence 4
No 483
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=87.72 E-value=3.3 Score=28.86 Aligned_cols=73 Identities=18% Similarity=0.165 Sum_probs=48.9
Q ss_pred CCCeEEEecCCcchHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhh-cCCceEEEEcccccccCC-----------
Q 031325 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAAD-LELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~l----a~~~~~~v~~~D~~~~~~~~a~~~~~~-~~~~~~~~~~d~~~~~~~----------- 111 (161)
.++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+...+.. .+.++.++.+|+.+...-
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSG-IGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5677887776654 44444 44455 999999998776655554432 344788999999875321
Q ss_pred CcccEEEECCC
Q 031325 112 GHVDTVVMNPP 122 (161)
Q Consensus 112 ~~~D~i~~~~p 122 (161)
...|+++.|.-
T Consensus 104 g~id~lv~nAg 114 (277)
T 4fc7_A 104 GRIDILINCAA 114 (277)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 15899998764
No 484
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.71 E-value=4.1 Score=29.34 Aligned_cols=98 Identities=15% Similarity=0.042 Sum_probs=56.5
Q ss_pred CeEEEecCCc--chHHHHHHHcCCCeEEEEeCChHHHHHHHHHHh-------hcCC------------ceEEEEcccccc
Q 031325 50 KVVADFGCGC--GTLGAAATLLGADQVIAIDIDSDSLELASENAA-------DLEL------------DIDFVQCDIRNL 108 (161)
Q Consensus 50 ~~vlD~g~G~--G~~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~-------~~~~------------~~~~~~~d~~~~ 108 (161)
.+|.-+|+|. +.++..+++.|. +|+++|.+++.++.+++.+. ..|. ++.+ ..|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHHH
Confidence 5788888874 235555566666 89999999999988865432 1221 1222 2222221
Q ss_pred cCCCcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEeccCc
Q 031325 109 EWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTST 154 (161)
Q Consensus 109 ~~~~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (161)
. ...|+|+..-|- +......++.++...+++...++.++++
T Consensus 85 v--~~aDlVieavpe---~~~~k~~v~~~l~~~~~~~~Ii~s~tS~ 125 (319)
T 2dpo_A 85 V--EGVVHIQECVPE---NLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp T--TTEEEEEECCCS---CHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred H--hcCCEEEEeccC---CHHHHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 1 257999876661 1123346677777777654444444443
No 485
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=87.67 E-value=2.4 Score=30.55 Aligned_cols=86 Identities=26% Similarity=0.338 Sum_probs=52.3
Q ss_pred CCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-------Cccc
Q 031325 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-------GHVD 115 (161)
Q Consensus 45 ~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-------~~~D 115 (161)
...++++||-.|+|. |..++.+++. |. +|++++.++..++.+++ .|... + .|..+.... ..+|
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~~-~--~d~~~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGADL-V--VNPLKEDAAKFMKEKVGGVH 232 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTCSE-E--ECTTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCCCE-E--ecCCCccHHHHHHHHhCCCC
Confidence 556788999999853 5556666654 55 99999999998887754 33221 1 122111100 2589
Q ss_pred EEEECCCCCCCCCCcchHHHHHHHhhcCCcE
Q 031325 116 TVVMNPPFGTRKKGVDMDFLSMALKVASQAV 146 (161)
Q Consensus 116 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 146 (161)
+++-... ....++...+.+++.+
T Consensus 233 ~vid~~g--------~~~~~~~~~~~l~~~G 255 (339)
T 1rjw_A 233 AAVVTAV--------SKPAFQSAYNSIRRGG 255 (339)
T ss_dssp EEEESSC--------CHHHHHHHHHHEEEEE
T ss_pred EEEECCC--------CHHHHHHHHHHhhcCC
Confidence 8887433 1245667777776433
No 486
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=87.59 E-value=3.3 Score=27.94 Aligned_cols=73 Identities=21% Similarity=0.222 Sum_probs=48.2
Q ss_pred CeEEEecCCcchHHHHHHH----cCCC------eEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC--------
Q 031325 50 KVVADFGCGCGTLGAAATL----LGAD------QVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-------- 111 (161)
Q Consensus 50 ~~vlD~g~G~G~~~~~la~----~~~~------~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-------- 111 (161)
+++|=.| |+|.++..+++ .|.. +|+.++.++..++.....+...+.++.++.+|+.+...-
T Consensus 3 k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 3 HILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp EEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 4566555 55666666554 3543 799999998877766666554454688899999775321
Q ss_pred ---CcccEEEECCCC
Q 031325 112 ---GHVDTVVMNPPF 123 (161)
Q Consensus 112 ---~~~D~i~~~~p~ 123 (161)
...|+++.+.-.
T Consensus 82 ~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HhCCCCCEEEEcCCc
Confidence 158999987543
No 487
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=87.54 E-value=0.99 Score=29.69 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=52.6
Q ss_pred cCCCCCCeEEEecCC--cchHHHHHHH-cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccccc---------CC
Q 031325 44 FGDVSNKVVADFGCG--CGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE---------WR 111 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G--~G~~~~~la~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---------~~ 111 (161)
....++++|+..|++ .|.....+++ .|. +|+++|.+++..+.+++ .+.... . |..+.. ..
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~~~-~--d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGVEYV-G--DSRSVDFADEILELTDG 105 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCCSEE-E--ETTCSTHHHHHHHHTTT
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCCEE-e--eCCcHHHHHHHHHHhCC
Confidence 345678899999953 3444444444 365 89999999887766543 343211 1 222111 01
Q ss_pred CcccEEEECCCCCCCCCCcchHHHHHHHhhcCCcEEEEe
Q 031325 112 GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (161)
Q Consensus 112 ~~~D~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (161)
..+|+++.+.. ...++.+.+.+++.+.++.
T Consensus 106 ~~~D~vi~~~g---------~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 106 YGVDVVLNSLA---------GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp CCEEEEEECCC---------THHHHHHHHTEEEEEEEEE
T ss_pred CCCeEEEECCc---------hHHHHHHHHHhccCCEEEE
Confidence 15899997432 1567777888874444443
No 488
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=87.43 E-value=1 Score=32.49 Aligned_cols=47 Identities=21% Similarity=0.267 Sum_probs=36.3
Q ss_pred hhcCCCCCCeEEEecCCc--chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 42 NSFGDVSNKVVADFGCGC--GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~--G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
......++++||-.|+|+ |..+..+++. |. +|++++.++..++.+++
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLR 187 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 344566889999999874 5666666664 66 99999999998888765
No 489
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.42 E-value=1.2 Score=32.39 Aligned_cols=45 Identities=29% Similarity=0.282 Sum_probs=34.3
Q ss_pred cCCCCCCeEEEecCCc-chHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 031325 44 FGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 44 ~~~~~~~~vlD~g~G~-G~~~~~la~~-~~~~v~~~D~~~~~~~~a~~ 89 (161)
....++++||-.|+|. |..++.+++. |. +|++++.++..++.+++
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMK 221 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence 4556789999999853 5566666664 66 79999999998888765
No 490
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=87.40 E-value=3.5 Score=27.89 Aligned_cols=73 Identities=22% Similarity=0.275 Sum_probs=46.8
Q ss_pred CCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHH-hhcCCceEEEEcccccccCC-----------C
Q 031325 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENA-ADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 49 ~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
++++|=.|+ +|.++..++ +.|. +|+.++.++..++.....+ ...+.++.++.+|+.+...- .
T Consensus 2 ~k~vlItGa-sggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGA-SSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 345666664 455555554 4455 8999999987776655544 22233678899998775321 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.+.-.
T Consensus 80 ~id~li~~Ag~ 90 (250)
T 2cfc_A 80 AIDVLVNNAGI 90 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999987643
No 491
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.29 E-value=2.9 Score=29.45 Aligned_cols=74 Identities=14% Similarity=0.162 Sum_probs=48.1
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCC--hHHHHHHHHHHhhcCCceEEEEcccccccCC----------
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDID--SDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~--~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~---------- 111 (161)
+++++|=.|++.| ++.. +++.|. +|+.++.+ +...+.....+...+.++.++.+|+.+...-
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5667777776554 4444 444565 88888876 3445555555555565788888998775321
Q ss_pred -CcccEEEECCCC
Q 031325 112 -GHVDTVVMNPPF 123 (161)
Q Consensus 112 -~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 126 ~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 126 LGGLDILALVAGK 138 (294)
T ss_dssp HTCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 157999987654
No 492
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=87.26 E-value=2.9 Score=28.62 Aligned_cols=74 Identities=19% Similarity=0.149 Sum_probs=44.8
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcC-------CceEEEEcccccccCCC----
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLE-------LDIDFVQCDIRNLEWRG---- 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~~---- 112 (161)
.++++|=.|++ |.++..++ +.|. +|+.++.++...+...+.+...+ .++.++.+|+.+...-.
T Consensus 6 ~~k~vlITGas-ggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 6 RSALALVTGAG-SGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 45677766654 55555554 4455 89999999877665544433322 25778889987753211
Q ss_pred -------cc-cEEEECCCC
Q 031325 113 -------HV-DTVVMNPPF 123 (161)
Q Consensus 113 -------~~-D~i~~~~p~ 123 (161)
.. |+++.+.-.
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~ 102 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGI 102 (264)
T ss_dssp HHHHHHSSCCSEEEECCCC
T ss_pred HHHHHhCCCCeEEEECCCc
Confidence 23 999987654
No 493
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=87.25 E-value=4.2 Score=27.74 Aligned_cols=71 Identities=27% Similarity=0.282 Sum_probs=48.0
Q ss_pred CCCeEEEecCCcchHHHH----HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~----la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
+++++|=.|++.| ++.. +++.|. +|+.++.++...+...+.+.. +..++..|+.+...- .
T Consensus 8 ~gk~~lVTGas~g-IG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRG-IGKAIAELLAERGA-KVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 5677777776654 4444 444565 899999998887766655543 467888888775421 1
Q ss_pred cccEEEECCCC
Q 031325 113 HVDTVVMNPPF 123 (161)
Q Consensus 113 ~~D~i~~~~p~ 123 (161)
..|+++.|.-.
T Consensus 83 ~iD~lv~nAg~ 93 (248)
T 3op4_A 83 GVDILVNNAGI 93 (248)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999988654
No 494
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.20 E-value=2.8 Score=29.07 Aligned_cols=74 Identities=23% Similarity=0.258 Sum_probs=47.2
Q ss_pred CCCeEEEecCCcchHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHh---hcCCceEEEEcccccccCC---------
Q 031325 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAA---DLELDIDFVQCDIRNLEWR--------- 111 (161)
Q Consensus 48 ~~~~vlD~g~G~G~~~~~la----~~~~~~v~~~D~~~~~~~~a~~~~~---~~~~~~~~~~~d~~~~~~~--------- 111 (161)
.++++|=.|++ |.++..++ +.|. +|+.++.++..++...+.+. ..+.++.++.+|+.+...-
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 45667766655 55555544 4455 89999999887776655552 2222578889998765321
Q ss_pred --CcccEEEECCCC
Q 031325 112 --GHVDTVVMNPPF 123 (161)
Q Consensus 112 --~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 157999987653
No 495
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=87.19 E-value=6.2 Score=27.88 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=44.0
Q ss_pred CCCCCeEEEecCCcch--HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCCCcccEEEECCCC
Q 031325 46 DVSNKVVADFGCGCGT--LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPF 123 (161)
Q Consensus 46 ~~~~~~vlD~g~G~G~--~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~p~ 123 (161)
...+++++=+|+|.-. ....+++.|..+++.++.+++..+...+.+...+ ++... +..+.. ..+|+|+..-|-
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~--~~~~l~--~~aDiIInaTp~ 197 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQ--AFEQLK--QSYDVIINSTSA 197 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEE--EGGGCC--SCEEEEEECSCC
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEe--eHHHhc--CCCCEEEEcCcC
Confidence 3467899999987322 2233444566699999999877665555554332 23322 233322 368888876664
Q ss_pred C
Q 031325 124 G 124 (161)
Q Consensus 124 ~ 124 (161)
+
T Consensus 198 g 198 (281)
T 3o8q_A 198 S 198 (281)
T ss_dssp C
T ss_pred C
Confidence 4
No 496
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.11 E-value=2.9 Score=29.80 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=41.8
Q ss_pred CCCeEEEecCCc-ch-HHHHHHHcCCCeEEEEeCCh------------------HHHHHHHHHHhhcCC--ceEEEEccc
Q 031325 48 SNKVVADFGCGC-GT-LGAAATLLGADQVIAIDIDS------------------DSLELASENAADLEL--DIDFVQCDI 105 (161)
Q Consensus 48 ~~~~vlD~g~G~-G~-~~~~la~~~~~~v~~~D~~~------------------~~~~~a~~~~~~~~~--~~~~~~~d~ 105 (161)
...+|+=+|||. |. .+..|+..|..+++.+|.+. ...+.+++++...+. ++..+..++
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l 114 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNI 114 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCT
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccC
Confidence 567999999983 44 55667777888999999775 566777777766543 555655554
Q ss_pred c
Q 031325 106 R 106 (161)
Q Consensus 106 ~ 106 (161)
.
T Consensus 115 ~ 115 (292)
T 3h8v_A 115 T 115 (292)
T ss_dssp T
T ss_pred C
Confidence 3
No 497
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.06 E-value=2.5 Score=30.45 Aligned_cols=48 Identities=29% Similarity=0.315 Sum_probs=35.1
Q ss_pred hhcCCCCCCeEEEecCCcch-HHHHHHH-cCCCeEEEEeCChHHHHHHHH
Q 031325 42 NSFGDVSNKVVADFGCGCGT-LGAAATL-LGADQVIAIDIDSDSLELASE 89 (161)
Q Consensus 42 ~~~~~~~~~~vlD~g~G~G~-~~~~la~-~~~~~v~~~D~~~~~~~~a~~ 89 (161)
......++++||=.|+|++. ++..+++ .+..+|+++|.+++.++.+++
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 34456688999999998754 4444454 456699999999998877654
No 498
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=86.87 E-value=3.1 Score=28.99 Aligned_cols=74 Identities=15% Similarity=0.164 Sum_probs=49.7
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------C
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 112 (161)
.+++++|--|++.|. .+..+++.|. +|+.++.+++..+.+.+ +...+-++.++.+|+.+...- .
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDA-LAQRQPRATYLPVELQDDAQCRDAVAQTIATFG 82 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHH-HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHH-HHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 367888888887773 4455566665 88888987665554433 333344788999999775321 2
Q ss_pred cccEEEECCC
Q 031325 113 HVDTVVMNPP 122 (161)
Q Consensus 113 ~~D~i~~~~p 122 (161)
..|+++.|.-
T Consensus 83 ~iDiLVNnAG 92 (258)
T 4gkb_A 83 RLDGLVNNAG 92 (258)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998753
No 499
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.87 E-value=4.7 Score=27.90 Aligned_cols=76 Identities=26% Similarity=0.309 Sum_probs=49.1
Q ss_pred CCCCeEEEecCCcch---HHHHHHHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccccCC-----------
Q 031325 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (161)
Q Consensus 47 ~~~~~vlD~g~G~G~---~~~~la~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~----------- 111 (161)
..++++|=.|++.|. ++..+++.|. +|+.++. ++...+...+.+...+.++.++.+|+.+...-
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356777877766552 3334445565 7877765 45566666666666666788999999875421
Q ss_pred CcccEEEECCCC
Q 031325 112 GHVDTVVMNPPF 123 (161)
Q Consensus 112 ~~~D~i~~~~p~ 123 (161)
...|+++.|.-.
T Consensus 95 g~id~lvnnAg~ 106 (270)
T 3is3_A 95 GHLDIAVSNSGV 106 (270)
T ss_dssp SCCCEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 157999987554
No 500
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=86.79 E-value=2 Score=30.76 Aligned_cols=45 Identities=13% Similarity=0.182 Sum_probs=32.3
Q ss_pred hcCCCCCCeEEEecC--CcchHHHHHHHc-CCCeEEEEeCChHHHHHHH
Q 031325 43 SFGDVSNKVVADFGC--GCGTLGAAATLL-GADQVIAIDIDSDSLELAS 88 (161)
Q Consensus 43 ~~~~~~~~~vlD~g~--G~G~~~~~la~~-~~~~v~~~D~~~~~~~~a~ 88 (161)
.....+++++|-.|+ |.|.....+++. |. +|+++|.+++.++.++
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~ 187 (333)
T 1v3u_A 140 VCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLK 187 (333)
T ss_dssp TSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred hhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 345567889999998 344555555553 55 9999999998887763
Done!