Query 031330
Match_columns 161
No_of_seqs 128 out of 1086
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 12:34:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031330.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031330hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03157 spermidine hydroxycin 100.0 1.9E-40 4.2E-45 284.1 14.7 151 7-160 1-151 (447)
2 PF02458 Transferase: Transfer 100.0 1.4E-39 2.9E-44 275.8 10.0 152 7-160 1-152 (432)
3 PLN02663 hydroxycinnamoyl-CoA: 100.0 6.6E-38 1.4E-42 267.1 14.8 150 7-160 1-150 (431)
4 PLN02481 Omega-hydroxypalmitat 100.0 1.2E-37 2.6E-42 266.2 14.6 153 6-160 11-163 (436)
5 PLN00140 alcohol acetyltransfe 100.0 1.8E-36 4E-41 259.6 13.4 147 7-160 1-153 (444)
6 PF13092 CENP-L: Kinetochore c 58.4 7.6 0.00016 29.1 2.0 20 140-159 131-152 (162)
7 PF03007 WES_acyltransf: Wax e 48.7 29 0.00063 27.7 4.1 46 41-86 18-63 (263)
8 COG0771 MurD UDP-N-acetylmuram 31.8 62 0.0013 28.4 3.7 30 66-103 296-325 (448)
9 PF15096 G6B: G6B family 25.4 15 0.00032 28.6 -1.1 40 64-103 47-92 (224)
10 PF11631 DUF3255: Protein of u 23.7 33 0.00072 23.9 0.5 29 70-98 77-105 (123)
11 PRK09294 acyltransferase PapA5 22.4 92 0.002 26.2 3.1 37 59-95 34-70 (416)
12 COG3526 Uncharacterized protei 21.1 1.7E+02 0.0037 19.8 3.5 36 74-111 32-69 (99)
No 1
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=100.00 E-value=1.9e-40 Score=284.07 Aligned_cols=151 Identities=32% Similarity=0.540 Sum_probs=129.9
Q ss_pred eEEEEecceeeeCCCCCCCCccCCCcccccccccccccEEEEEecCCCCCCCChHHHHHHHHHHhhhhhcccCCccccCC
Q 031330 7 FKVLRRAPELIAPAKPTPRELKPLSDIDDQEGLRFHIPVIQFYKYNPFVNGKDPVKVIREAIAQTLVSYYPFAGRLREGP 86 (161)
Q Consensus 7 ~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~ 86 (161)
|.|++.++++|+|+.|||++.++||+||+. ..++|++.||||+.+...+..+++++||+|||+||++||||||||+.++
T Consensus 1 ~~v~~~~~~~v~Ps~ptp~~~~~LS~lD~~-~~~~~v~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~ 79 (447)
T PLN03157 1 MVVILKASYTVKPAKPTWTGRRSLSEWDQV-GTITHVPTIYFYSPPWNTSSGSIIEILKDSLSRALVPFYPLAGRLRWIG 79 (447)
T ss_pred CeEEEeccEEECCCCCCCCCccCCChhhhc-cccccCCEEEEEeCCCccccccHHHHHHHHHHHHHhhccccCEEEEEcC
Confidence 579999999999999999999999999975 5688999999998653222335689999999999999999999999988
Q ss_pred CCcEEEEecCCceEEEEEEcCCChhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEeEEecCCCeEEEeec
Q 031330 87 NRKLMVDCTGEGVLFIEADADVTLEQFGDALQPPFPGLEELLFDVPGSAGVLNCPLLLIQVYTYIFSFIIINLL 160 (161)
Q Consensus 87 ~g~~~I~c~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~L~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~ 160 (161)
+|+++|+|||+||+|+||+++++++|+++. .+.+.+++|+|..+...+..+.|++.||||+|.|||++||++
T Consensus 80 ~g~~~i~c~~~Gv~fveA~~~~~l~~~~~~--~~~~~~~~l~P~~~~~~~~~~~Pll~vQvT~F~cGG~~lg~~ 151 (447)
T PLN03157 80 GGRLELECNAMGVLLIEAESEAKLDDFGDF--SPTPEFEYLIPSVDYTKPIHELPLLLVQLTKFSCGGISLGLG 151 (447)
T ss_pred CCcEEEEECCCCeEEEEEEeCCcHHHhhcc--CCCHHHHhhcCCCCcccccccCceEEEEEEEecCCCEEEEEE
Confidence 999999999999999999999999999752 344567789887643333446899999999999999999986
No 2
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=100.00 E-value=1.4e-39 Score=275.76 Aligned_cols=152 Identities=36% Similarity=0.589 Sum_probs=121.0
Q ss_pred eEEEEecceeeeCCCCCCCCccCCCcccccccccccccEEEEEecCCCCCCCChHHHHHHHHHHhhhhhcccCCccccCC
Q 031330 7 FKVLRRAPELIAPAKPTPRELKPLSDIDDQEGLRFHIPVIQFYKYNPFVNGKDPVKVIREAIAQTLVSYYPFAGRLREGP 86 (161)
Q Consensus 7 ~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~ 86 (161)
|+|+|.++++|+|+.|+|++.++||+||.++...+|++.+|||+.+.......++++||+|||++|++|||||||| +++
T Consensus 1 m~v~v~~~~~V~Ps~~tp~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~~lAGrl-~~~ 79 (432)
T PF02458_consen 1 MKVTVLSRSLVKPSSPTPPHTLPLSNLDLQLMPPYYVPVLLFYRPPSSSDDSDIVDNLKESLSKTLVHYYPLAGRL-RDP 79 (432)
T ss_dssp ---EEEEECEEE-STTS-TCEEE--HHHHHCCGCSEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHTTSGGGGSEE-ESS
T ss_pred CCCEEecCEEEECCCCCCCCcccCchhhcCcccccEEEEEEEecCccccccchHHHHHHHHHHHhHhhCcccCcEE-ccc
Confidence 7899999999999999999999999999666778899999999986543222358999999999999999999999 766
Q ss_pred CCcEEEEecCCceEEEEEEcCCChhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEeEEecCCCeEEEeec
Q 031330 87 NRKLMVDCTGEGVLFIEADADVTLEQFGDALQPPFPGLEELLFDVPGSAGVLNCPLLLIQVYTYIFSFIIINLL 160 (161)
Q Consensus 87 ~g~~~I~c~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~L~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~ 160 (161)
+|+++|+|||+||+|+||+++.+++|+.... ++.....+|+|..+...+..+.|++.||||+|+|||++||++
T Consensus 80 ~~~~~i~c~d~Gv~f~~a~~~~~l~~~~~~~-~~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~lg~~ 152 (432)
T PF02458_consen 80 DGRLEIDCNDDGVEFVEAEADGTLDDLLDLE-PPSEFLRDLVPQLPVSSEGEDAPLLAVQVTRFKCGGLALGVS 152 (432)
T ss_dssp CTTTEEEECTTTEEEEEEEESS-HHHHCSSS-CCGGGGGGGSSS-SSSEEETTEBSEEEEEEEETTTEEEEEEE
T ss_pred ccceEEEEecCCCEEEEEecccceeeccccc-cchHHHHHHhhhcccCCcccccceeEeeeeeecccceeeeee
Confidence 9999999999999999999999999998743 444456678886654433346899999999999999999986
No 3
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=100.00 E-value=6.6e-38 Score=267.15 Aligned_cols=150 Identities=34% Similarity=0.562 Sum_probs=127.6
Q ss_pred eEEEEecceeeeCCCCCCCCccCCCcccccccccccccEEEEEecCCCCCCCChHHHHHHHHHHhhhhhcccCCccccCC
Q 031330 7 FKVLRRAPELIAPAKPTPRELKPLSDIDDQEGLRFHIPVIQFYKYNPFVNGKDPVKVIREAIAQTLVSYYPFAGRLREGP 86 (161)
Q Consensus 7 ~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~ 86 (161)
|+|++.++++|+|+.|||++.++||+||+. ...+|++.+|||+.+...+ ....++||+|||++|++||||||||+.++
T Consensus 1 ~~v~~~~~~~V~Ps~ptp~~~~~LS~lD~~-~~~~~~~~v~fY~~~~~~~-~~~~~~Lk~sLs~~L~~~yplaGRl~~~~ 78 (431)
T PLN02663 1 MIINVRESTMVRPAEETPRRGLWNSNVDLV-VPRFHTPSVYFYRPTGASN-FFDPQVMKEALSKALVPFYPMAGRLRRDE 78 (431)
T ss_pred CeEEEcCcEEECCCCCCCCCcccCChhhcc-cccccccEEEEEcCCCCCC-ccCHHHHHHHHHHHHhhccccceeeeECC
Confidence 579999999999999999999999999975 5688999999999754222 22368999999999999999999999998
Q ss_pred CCcEEEEecCCceEEEEEEcCCChhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEeEEecCCCeEEEeec
Q 031330 87 NRKLMVDCTGEGVLFIEADADVTLEQFGDALQPPFPGLEELLFDVPGSAGVLNCPLLLIQVYTYIFSFIIINLL 160 (161)
Q Consensus 87 ~g~~~I~c~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~L~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~ 160 (161)
+|+++|+|||+||.|+||+++++++|+++. .+...+++|+|..+...+..+.|+|.||||+|.|||++||++
T Consensus 79 ~g~~~i~c~~~Gv~fv~A~~~~~l~~~~~~--~~~~~~~~l~P~~~~~~~~~~~P~l~vQvt~F~cGG~~lg~~ 150 (431)
T PLN02663 79 DGRIEIDCNAEGVLFVEADTPSVIDDFGDF--APTLELRQLIPTVDYSGGISSYPLLVLQVTHFKCGGVSLGVG 150 (431)
T ss_pred CCCEEEEECCCCceEEEEecCCCHHHhhcc--CCCHHHHhhcCCCCCccccccCceEEEEEEEeccCCEEEEEE
Confidence 999999999999999999999999999752 243456678887543333346899999999999999999986
No 4
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=100.00 E-value=1.2e-37 Score=266.16 Aligned_cols=153 Identities=38% Similarity=0.688 Sum_probs=129.6
Q ss_pred eeEEEEecceeeeCCCCCCCCccCCCcccccccccccccEEEEEecCCCCCCCChHHHHHHHHHHhhhhhcccCCccccC
Q 031330 6 TFKVLRRAPELIAPAKPTPRELKPLSDIDDQEGLRFHIPVIQFYKYNPFVNGKDPVKVIREAIAQTLVSYYPFAGRLREG 85 (161)
Q Consensus 6 ~~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~ 85 (161)
.++|++.++++|+|+.|||++.++||+||++ ..+|++.+|||+.++..+...++++||+||+++|++||||||||+.+
T Consensus 11 ~~~v~~~~~~~V~Ps~ptp~~~~~LS~lD~~--~~~~~~~~~fy~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRL~~~ 88 (436)
T PLN02481 11 QLVVKQKEPELVPPAEETPKGLYFLSNLDQN--IAVIVRTVYCFKSEERGSNEDPVDVIKKALSKVLVHYYPLAGRLTIS 88 (436)
T ss_pred ceEEEEcCCEEeCCCCCCCCCceecCccccC--cceeeeEEEEECCCCcccccCHHHHHHHHHHHHhccccCCCCeeeeC
Confidence 4779999999999999999999999999985 34789999999976543345689999999999999999999999999
Q ss_pred CCCcEEEEecCCceEEEEEEcCCChhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEeEEecCCCeEEEeec
Q 031330 86 PNRKLMVDCTGEGVLFIEADADVTLEQFGDALQPPFPGLEELLFDVPGSAGVLNCPLLLIQVYTYIFSFIIINLL 160 (161)
Q Consensus 86 ~~g~~~I~c~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~L~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~ 160 (161)
++|+++|+|||+||+|+||++|.+++|++....++...+++|+|..+...+....|+++||||+|+|||++||++
T Consensus 89 ~~g~~~i~c~~~Gv~fvea~~d~~l~~l~~~~~p~~~~~~~l~~~~~~~~~~~~~Pll~vQvT~F~~GG~~lg~~ 163 (436)
T PLN02481 89 SEGKLIVDCTGEGVVFVEAEANCSIEEIGDITKPDPETLGKLVYDVPGAKNILEIPPLTAQVTRFKCGGFVLGLC 163 (436)
T ss_pred CCCcEEEEEcCCCeEEEEEEecCcHHHhccccCCCCHHHHHhCCCCCCcccccccceeeeccceEecCcEEEEEE
Confidence 999999999999999999999999999975322223456778776543333345899999999999999999986
No 5
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=259.58 Aligned_cols=147 Identities=30% Similarity=0.401 Sum_probs=120.8
Q ss_pred eEEEEecceeeeCCCCCCCC--ccCCCcccccccccccccEEEEEecCCCCCC--CChHHHHHHHHHHhhhhhcccCCcc
Q 031330 7 FKVLRRAPELIAPAKPTPRE--LKPLSDIDDQEGLRFHIPVIQFYKYNPFVNG--KDPVKVIREAIAQTLVSYYPFAGRL 82 (161)
Q Consensus 7 ~~V~v~~~~~V~P~~~t~~~--~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~--~~~~~~Lk~sLs~~L~~f~plAGRl 82 (161)
|+|++.++++|+|+.|||.+ .++||+||+. ...+|++.+|||+.++..+. ...+++||+|||++|++||||||||
T Consensus 1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~-~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl 79 (444)
T PLN00140 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQL-TPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRV 79 (444)
T ss_pred CeeEEeccceeccCCCCccccccCCCChHHhc-ccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCccc
Confidence 57999999999999999875 6789999974 66889999999997542222 2578999999999999999999999
Q ss_pred ccCCCCcEEEEecCCceEEEEEEcCCChhhhcCCCCCCcccccccCCCCCCC--CCCCCCCeEEEeEEecCCCeEEEeec
Q 031330 83 REGPNRKLMVDCTGEGVLFIEADADVTLEQFGDALQPPFPGLEELLFDVPGS--AGVLNCPLLLIQVYTYIFSFIIINLL 160 (161)
Q Consensus 83 ~~~~~g~~~I~c~~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~L~~~~~~~--~~~~~~pll~vQvT~f~cGG~~lg~~ 160 (161)
+. +++|+|||+||+|+||+++++++|++. ++....+++|+|..+.. .+..+.|+|+||||+|+|||++||++
T Consensus 80 ~~----~~~i~cn~~Gv~fveA~~~~~l~d~l~--~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~ 153 (444)
T PLN00140 80 KD----NLIIDNYEEGVPFFETRVKGSLSDFLK--HPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLC 153 (444)
T ss_pred cC----CceeEccCCCceEEEEEecCcHHHhcC--CCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEee
Confidence 86 589999999999999999999999964 22223567787754321 12245799999999999999999986
No 6
>PF13092 CENP-L: Kinetochore complex Sim4 subunit Fta1
Probab=58.36 E-value=7.6 Score=29.15 Aligned_cols=20 Identities=5% Similarity=-0.026 Sum_probs=16.8
Q ss_pred CCeE--EEeEEecCCCeEEEee
Q 031330 140 CPLL--LIQVYTYIFSFIIINL 159 (161)
Q Consensus 140 ~pll--~vQvT~f~cGG~~lg~ 159 (161)
..|- .+++++..||||+||.
T Consensus 131 l~L~~~~~~L~kI~~~~~~l~~ 152 (162)
T PF13092_consen 131 LDLDHPAVRLSKISCGGFVLGS 152 (162)
T ss_pred CCcccceeEEEEEecceeEeec
Confidence 4455 8899999999999983
No 7
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=48.71 E-value=29 Score=27.73 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=35.0
Q ss_pred ccccEEEEEecCCCCCCCChHHHHHHHHHHhhhhhcccCCccccCC
Q 031330 41 FHIPVIQFYKYNPFVNGKDPVKVIREAIAQTLVSYYPFAGRLREGP 86 (161)
Q Consensus 41 ~~~~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~ 86 (161)
.++-.+++|+.+.........+.|++.+.+.+..++.|.-|++..+
T Consensus 18 mhv~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~ 63 (263)
T PF03007_consen 18 MHVGALAIFDPPTDGAPPLDVERLRARLEARLARHPRFRQRVVRVP 63 (263)
T ss_pred ceEEEEEEEEcCCCCCCcchHHHHHHHHHHhhccCCccccceecCC
Confidence 4677888998763222223589999999999999999999988754
No 8
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=31.79 E-value=62 Score=28.43 Aligned_cols=30 Identities=40% Similarity=0.562 Sum_probs=22.0
Q ss_pred HHHHHhhhhhcccCCccccCCCCcEEEEecCCceEEEE
Q 031330 66 EAIAQTLVSYYPFAGRLREGPNRKLMVDCTGEGVLFIE 103 (161)
Q Consensus 66 ~sLs~~L~~f~plAGRl~~~~~g~~~I~c~~~Gv~fve 103 (161)
+++.++|..|.++++|+. ..++.+|+.|+-
T Consensus 296 e~i~~~L~~F~gl~HR~e--------~v~~~~gv~f~N 325 (448)
T COG0771 296 EAILEALSSFTGLPHRLE--------FVGEKDGVLFIN 325 (448)
T ss_pred HHHHHHHHhCCCCCcceE--------EEEecCCEEEec
Confidence 468899999999998864 445555666655
No 9
>PF15096 G6B: G6B family
Probab=25.37 E-value=15 Score=28.58 Aligned_cols=40 Identities=28% Similarity=0.370 Sum_probs=24.1
Q ss_pred HHHHHHHhhhh--hcccCCccccCCCC--cEEEEe--cCCceEEEE
Q 031330 64 IREAIAQTLVS--YYPFAGRLREGPNR--KLMVDC--TGEGVLFIE 103 (161)
Q Consensus 64 Lk~sLs~~L~~--f~plAGRl~~~~~g--~~~I~c--~~~Gv~fve 103 (161)
|-.|-|.+... ..||||||+..+.| ++|+-. .|.|--|--
T Consensus 47 lWASssgtpTv~p~~pFaGRLR~ld~GIrrLELLLs~GDSGTFfCk 92 (224)
T PF15096_consen 47 LWASSSGTPTVPPLQPFAGRLRSLDPGIRRLELLLSAGDSGTFFCK 92 (224)
T ss_pred EEecCCCCCCCCcccccchhhhccchhHHHHHHHhhcCCccceEec
Confidence 33444444443 78999999987654 555543 356665543
No 10
>PF11631 DUF3255: Protein of unknown function (DUF3255); InterPro: IPR021664 Members in this family of proteins are annotated as YxeF however no function is currently known. The family appears to be restricted to Bacillus. ; PDB: 2JOZ_A.
Probab=23.72 E-value=33 Score=23.88 Aligned_cols=29 Identities=34% Similarity=0.631 Sum_probs=20.3
Q ss_pred HhhhhhcccCCccccCCCCcEEEEecCCc
Q 031330 70 QTLVSYYPFAGRLREGPNRKLMVDCTGEG 98 (161)
Q Consensus 70 ~~L~~f~plAGRl~~~~~g~~~I~c~~~G 98 (161)
+-|-+|||+-..|++.++|.+...-|++-
T Consensus 77 qylg~~~plkstlkrgen~tliw~~~g~t 105 (123)
T PF11631_consen 77 QYLGPYYPLKSTLKRGENGTLIWEQNGQT 105 (123)
T ss_dssp EEESTT-S-EEEEEE-STT-EEEEETTEE
T ss_pred EEcCCCcchhhHhhcCCCCcEEEEecCce
Confidence 45788999999999999998877777653
No 11
>PRK09294 acyltransferase PapA5; Provisional
Probab=22.44 E-value=92 Score=26.22 Aligned_cols=37 Identities=11% Similarity=0.100 Sum_probs=29.6
Q ss_pred ChHHHHHHHHHHhhhhhcccCCccccCCCCcEEEEec
Q 031330 59 DPVKVIREAIAQTLVSYYPFAGRLREGPNRKLMVDCT 95 (161)
Q Consensus 59 ~~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~I~c~ 95 (161)
...+.|++||.+++..|+-|..|+..+++|.+++...
T Consensus 34 lD~~~L~~Al~~l~~rhp~Lr~~~~~~~~~~~~~~~~ 70 (416)
T PRK09294 34 LDIDALSDAFDALLRAHPVLAAHLEQDSDGGWELVAD 70 (416)
T ss_pred CCHHHHHHHHHHHHHhCHHhhEEEEECCCCceEEeeC
Confidence 3489999999999999999999996666666555443
No 12
>COG3526 Uncharacterized protein conserved in bacteria [Posttranslational modification, protein turnover, chaperones]
Probab=21.06 E-value=1.7e+02 Score=19.78 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=22.1
Q ss_pred hhcccCCcccc--CCCCcEEEEecCCceEEEEEEcCCChh
Q 031330 74 SYYPFAGRLRE--GPNRKLMVDCTGEGVLFIEADADVTLE 111 (161)
Q Consensus 74 ~f~plAGRl~~--~~~g~~~I~c~~~Gv~fveA~~~~~l~ 111 (161)
-|--=-|.+.- ..+|.++|.||+ +...|-+.|.-+.
T Consensus 32 TF~~dlgeV~L~PgTGG~FeI~~dg--~~iWeRKrdGGFP 69 (99)
T COG3526 32 TFADDLGEVALIPGTGGVFEITCDG--VLIWERKRDGGFP 69 (99)
T ss_pred HHHhhhheEEEecCCCceEEEEECC--EEEEEeeccCCCC
Confidence 33333344333 347899999964 7777777765443
Done!