Query 031330
Match_columns 161
No_of_seqs 128 out of 1086
Neff 7.6
Searched_HMMs 13730
Date Mon Mar 25 20:10:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031330.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031330hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f7la_ d.150.1.2 (A:) Holo-(a 29.2 49 0.0036 20.5 5.0 12 63-74 55-66 (118)
2 d2d8xa2 g.39.1.3 (A:8-32) Pinc 18.7 7 0.00051 18.1 -0.8 8 151-158 3-10 (26)
3 d2vqei1 d.14.1.1 (I:2-128) Rib 18.6 29 0.0021 22.3 2.1 19 59-77 71-89 (127)
4 d2joza1 b.60.1.1 (A:2-127) Hyp 18.0 17 0.0013 22.7 0.7 29 70-98 77-105 (126)
5 d1q9ja1 c.43.1.2 (A:1-175) Pol 17.7 62 0.0045 20.6 3.8 33 60-92 35-67 (175)
6 d1vzya1 d.193.1.1 (A:1-233) He 16.3 60 0.0043 22.6 3.6 50 62-113 36-88 (233)
7 d1bvsa3 b.40.4.2 (A:1-63) DNA 16.0 20 0.0014 20.0 0.6 24 77-100 4-27 (63)
8 d1vq0a1 d.193.1.1 (A:1-230) He 15.5 73 0.0053 22.1 3.9 50 62-113 34-86 (230)
9 d1b8aa2 d.104.1.1 (A:104-438) 14.9 17 0.0013 26.7 0.2 9 151-159 299-307 (335)
10 d1hw7a_ d.193.1.1 (A:) Heat sh 14.2 70 0.0051 22.1 3.5 51 60-112 34-87 (229)
No 1
>d1f7la_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Bacillus subtilis [TaxId: 1423]}
Probab=29.16 E-value=49 Score=20.45 Aligned_cols=12 Identities=17% Similarity=0.346 Sum_probs=10.0
Q ss_pred HHHHHHHHhhhh
Q 031330 63 VIREAIAQTLVS 74 (161)
Q Consensus 63 ~Lk~sLs~~L~~ 74 (161)
..|+|+.++|..
T Consensus 55 AaKEA~~Kalg~ 66 (118)
T d1f7la_ 55 AAKEAFSKAFGT 66 (118)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHhccc
Confidence 589999999963
No 2
>d2d8xa2 g.39.1.3 (A:8-32) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.67 E-value=7 Score=18.10 Aligned_cols=8 Identities=25% Similarity=0.135 Sum_probs=6.1
Q ss_pred CCCeEEEe
Q 031330 151 IFSFIIIN 158 (161)
Q Consensus 151 ~cGG~~lg 158 (161)
+||-|+||
T Consensus 3 kcgefiig 10 (26)
T d2d8xa2 3 QCGEFIIG 10 (26)
T ss_dssp SSCCBCCS
T ss_pred ccccchhH
Confidence 58888877
No 3
>d2vqei1 d.14.1.1 (I:2-128) Ribosomal protein S9 {Thermus thermophilus [TaxId: 274]}
Probab=18.59 E-value=29 Score=22.30 Aligned_cols=19 Identities=37% Similarity=0.669 Sum_probs=16.7
Q ss_pred ChHHHHHHHHHHhhhhhcc
Q 031330 59 DPVKVIREAIAQTLVSYYP 77 (161)
Q Consensus 59 ~~~~~Lk~sLs~~L~~f~p 77 (161)
..++.++.++|++|+.|.|
T Consensus 71 gQa~Air~aIaRaL~~~~~ 89 (127)
T d2vqei1 71 GQIDAIKLGIARALVQYNP 89 (127)
T ss_dssp HHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHHHCH
Confidence 3589999999999999876
No 4
>d2joza1 b.60.1.1 (A:2-127) Hypothetical protein YxeF {Bacillus subtilis [TaxId: 1423]}
Probab=17.98 E-value=17 Score=22.67 Aligned_cols=29 Identities=34% Similarity=0.633 Sum_probs=24.5
Q ss_pred HhhhhhcccCCccccCCCCcEEEEecCCc
Q 031330 70 QTLVSYYPFAGRLREGPNRKLMVDCTGEG 98 (161)
Q Consensus 70 ~~L~~f~plAGRl~~~~~g~~~I~c~~~G 98 (161)
+-|-+|||+-..|.+.++|.+...-|++-
T Consensus 77 ~ylg~~~p~kstlkrg~n~tliw~~~g~~ 105 (126)
T d2joza1 77 QYLGPYYPLKSTLKRGENGTLIWEQNGQR 105 (126)
T ss_dssp EEESTTCSCEEEEEECSTTCEEEEETTEE
T ss_pred EEcCCCcchhhHHhCCCCCcEEEEecCce
Confidence 45789999999999999999888888754
No 5
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=17.65 E-value=62 Score=20.55 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHhhhhhcccCCccccCCCCcEEE
Q 031330 60 PVKVIREAIAQTLVSYYPFAGRLREGPNRKLMV 92 (161)
Q Consensus 60 ~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~I 92 (161)
..+.|++++..++..++.|-.+++.+++|.+..
T Consensus 35 d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~~~ 67 (175)
T d1q9ja1 35 DVDALSDAFDALLETHPVLASHLEQSSDGGWNL 67 (175)
T ss_dssp CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEE
T ss_pred CHHHHHHHHHHHHHhchhheEEEEEeCCeeEEE
Confidence 489999999999999999999998877665544
No 6
>d1vzya1 d.193.1.1 (A:1-233) Heat shock protein 33, Hsp33 {Bacillus subtilis [TaxId: 1423]}
Probab=16.26 E-value=60 Score=22.64 Aligned_cols=50 Identities=20% Similarity=0.351 Sum_probs=34.5
Q ss_pred HHHHHHHHHhhhhhcccCCccccCCCCcEEEEecCC---ceEEEEEEcCCChhhh
Q 031330 62 KVIREAIAQTLVSYYPFAGRLREGPNRKLMVDCTGE---GVLFIEADADVTLEQF 113 (161)
Q Consensus 62 ~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~I~c~~~---Gv~fveA~~~~~l~~l 113 (161)
......|+++|+.---||+.++.+ |++.|...+. +-.++++..+..+.-.
T Consensus 36 ~~~~~lLg~~l~a~~LL~~~lK~~--g~~tlq~~g~Gpi~~lv~e~~~~g~vRg~ 88 (233)
T d1vzya1 36 PTASAALGRTMTASLMLGAMLKGD--DKLTVKIEGGGPIGAIVADANAKGEVRAY 88 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCTT--CEEEEEEECSSTTCEEEEEEETTSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCC--CEEEEEEEcCCCcceEEEEecCCCceEEE
Confidence 345678999999999999888864 6766655443 4566677666665543
No 7
>d1bvsa3 b.40.4.2 (A:1-63) DNA helicase RuvA subunit, N-terminal domain {Mycobacterium leprae [TaxId: 1769]}
Probab=15.96 E-value=20 Score=20.03 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=18.4
Q ss_pred ccCCccccCCCCcEEEEecCCceE
Q 031330 77 PFAGRLREGPNRKLMVDCTGEGVL 100 (161)
Q Consensus 77 plAGRl~~~~~g~~~I~c~~~Gv~ 100 (161)
-+.|++...+.+.+.|+|++=|-+
T Consensus 4 ~i~G~i~~~~~~~ivi~v~GvGY~ 27 (63)
T d1bvsa3 4 SVRGEVLEVALDHAVIEAAGIGYR 27 (63)
T ss_dssp EECEEEEEECSSCEEEEETTEEEC
T ss_pred EEEEEEEEECCCEEEEEECCEEEE
Confidence 467888888888999999865543
No 8
>d1vq0a1 d.193.1.1 (A:1-230) Heat shock protein 33, Hsp33 {Thermotoga maritima [TaxId: 2336]}
Probab=15.47 E-value=73 Score=22.10 Aligned_cols=50 Identities=12% Similarity=0.246 Sum_probs=32.0
Q ss_pred HHHHHHHHHhhhhhcccCCccccCCCCcEEEEecCC---ceEEEEEEcCCChhhh
Q 031330 62 KVIREAIAQTLVSYYPFAGRLREGPNRKLMVDCTGE---GVLFIEADADVTLEQF 113 (161)
Q Consensus 62 ~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~I~c~~~---Gv~fveA~~~~~l~~l 113 (161)
...+..|+++|+----||+.++. +|++.|...++ +-.++++..+..+.-.
T Consensus 34 ~~~~~lLg~~l~~~~Ll~s~lK~--~~ri~lqi~~~g~l~~lvae~~~~g~vRg~ 86 (230)
T d1vq0a1 34 YLATVVLGRALIGAALVTPWLAE--KERWTLDIEGNGPIRRVVAQSTSEFTVRGY 86 (230)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCCT--TCEEEEEEEESSTTCEEEEEEETTSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCc--CCEEEEEEEcCCCccEEEEEEeCCCcEEEE
Confidence 45566888998888889988775 35665554332 4455566555555543
No 9
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=14.87 E-value=17 Score=26.74 Aligned_cols=9 Identities=0% Similarity=-0.330 Sum_probs=7.4
Q ss_pred CCCeEEEee
Q 031330 151 IFSFIIINL 159 (161)
Q Consensus 151 ~cGG~~lg~ 159 (161)
.|||++||+
T Consensus 299 p~~G~glGi 307 (335)
T d1b8aa2 299 PHGGFGLGA 307 (335)
T ss_dssp CEEEEEEEH
T ss_pred CCceeeeHH
Confidence 489999986
No 10
>d1hw7a_ d.193.1.1 (A:) Heat shock protein 33, Hsp33 {Escherichia coli [TaxId: 562]}
Probab=14.20 E-value=70 Score=22.10 Aligned_cols=51 Identities=14% Similarity=0.245 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHhhhhhcccCCccccCCCCcEEEEe--cCC-ceEEEEEEcCCChhh
Q 031330 60 PVKVIREAIAQTLVSYYPFAGRLREGPNRKLMVDC--TGE-GVLFIEADADVTLEQ 112 (161)
Q Consensus 60 ~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~I~c--~~~-Gv~fveA~~~~~l~~ 112 (161)
.-......|+++|+-=--||..++.+ |++.|.. ++. |-.+++|..+..+.-
T Consensus 34 ~~~~~~~~Lg~~l~~~aLl~s~lK~~--~~~tlqi~g~Gpl~~i~ad~~~~g~vRg 87 (229)
T d1hw7a_ 34 YPQPVKNVLAELLVATSLLTATLKFD--GDITVQLQGDGPMNLAVINGNNNQQMRG 87 (229)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSSS--EEEEEEEEESSSSCEEEEEEETTCCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCcC--ceEEEEEEeCCCccEEEEEeCCCCccCc
Confidence 34556667888888888888888753 5555544 432 556666666655554
Done!