BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031332
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HDY3|YK17_SCHPO Membrane protein PB1A10.07c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAPB1A10.07c PE=3 SV=1
Length = 441
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 11/166 (6%)
Query: 2 YLCYSGLSSEPRDYECNGLHRHSKAVSTGSLTLGLITTVLSVVYSAVRAGSSTTLLSPPS 61
YL S L++ P + +CN + S +G T +++YSAVRA SS S
Sbjct: 276 YLILSALANRPDEGQCNPWGNSASGTREFSKVIGAAFTFFTILYSAVRAASSRESDDSYS 335
Query: 62 SPRAGGGKPLL--PMDKADEVEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWST-SV 118
A + P++ E+K ++ Y++ +FHI+F LA+ Y+A LLT W+T SV
Sbjct: 336 YLYADSHDMGVSTPLEDGSSEEDKHQSD---YNFIWFHIVFVLAAFYTASLLTNWNTTSV 392
Query: 119 GESGK---LVDVG--WPSVWVRILTGWATAALYMWSLVAPILFPDR 159
E+ K V +G + +VWV+I+T W LY+WS +AP+ FP R
Sbjct: 393 YENQKNDVFVRIGFSYAAVWVKIITSWVCHGLYVWSCLAPVFFPYR 438
>sp|A7S4N4|SERIC_NEMVE Probable serine incorporator OS=Nematostella vectensis GN=serinc
PE=3 SV=1
Length = 456
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 1 MYLCYSGLSSEPRDYECNGLHRHSKAVS--TGSLTLGLITTVLSVVYSAVRAGSSTTL-- 56
+YL +S LS +P D CNG + ++ +G+I + VVY++VR SS+ +
Sbjct: 276 VYLTWSALSFQP-DKNCNGFYETHITLAGMDSQAIIGVILMFVMVVYASVRTASSSQVGK 334
Query: 57 --LSPPSSPRAGGGKPLLPMDKADE-------VEEKEKAKPV--------TYSYAFFHII 99
+S P A K + + DE VEE + + V YSY+F+H +
Sbjct: 335 LGMSSPKHSSALD-KETTVLSEGDETRSDVGLVEEGGEGRRVYDDEDGGVAYSYSFYHFM 393
Query: 100 FSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDR 159
LAS+Y M LT W VG + +VWV+I + W +Y+W+L+AP LFPDR
Sbjct: 394 LMLASLYIMMTLTNWYKPVGSDFSKLQYSETAVWVKIASSWLCQLIYIWTLLAPALFPDR 453
Query: 160 EF 161
+F
Sbjct: 454 DF 455
>sp|Q3MHV9|SERC1_BOVIN Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1
Length = 453
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 26/184 (14%)
Query: 1 MYLCYSGLSSEPRDYECN-------GLHRHSKAVSTGSLT--------LGLITTVLSVVY 45
MYL +S +++EP + ECN G + S G +GLI +L V Y
Sbjct: 272 MYLTWSAMTNEP-ETECNPSLLNIIGYNTTSTVSKEGQSVQWWHTQGIIGLILFLLCVFY 330
Query: 46 SAVRAGSST-----TLLSPPSS-PRAGGGKPLLPMDKADEVEE--KEKAKPVTYSYAFFH 97
S++R +++ TL S S+ GG + ++ D+V + VTYSY+FFH
Sbjct: 331 SSIRTSNNSQVNKLTLTSDESTLIEDGGARNDGSLEDGDDVHRAVDNERDGVTYSYSFFH 390
Query: 98 IIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFP 157
+ LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++
Sbjct: 391 FMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLT 448
Query: 158 DREF 161
+R+F
Sbjct: 449 NRDF 452
>sp|Q9NRX5|SERC1_HUMAN Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1
Length = 453
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 26/184 (14%)
Query: 1 MYLCYSGLSSEPRDYECN-------GLHRHSKAVSTGSLT--------LGLITTVLSVVY 45
MYL +S +++EP + CN G + S G +GLI +L V Y
Sbjct: 272 MYLTWSAMTNEP-ETNCNPSLLSIIGYNTTSTVPKEGQSVQWWHAQGIIGLILFLLCVFY 330
Query: 46 SAVRAGSST-----TLLSPPSS-PRAGGGKPLLPMDKADEVEE--KEKAKPVTYSYAFFH 97
S++R +++ TL S S+ GG + ++ D+V + VTYSY+FFH
Sbjct: 331 SSIRTSNNSQVNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFH 390
Query: 98 IIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFP 157
+ LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++
Sbjct: 391 FMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLT 448
Query: 158 DREF 161
+R+F
Sbjct: 449 NRDF 452
>sp|Q5R419|SERC1_PONAB Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1
Length = 453
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 26/184 (14%)
Query: 1 MYLCYSGLSSEPRDYECN-------GLHRHSKAVSTGSLT--------LGLITTVLSVVY 45
MYL +S +++EP + CN G + S G +GLI +L V Y
Sbjct: 272 MYLTWSAMTNEP-ETNCNPSLLSIIGYNTTSTVPKEGQSVQWWHAQGIIGLILFLLCVFY 330
Query: 46 SAVRAGSST-----TLLSPPSS-PRAGGGKPLLPMDKADEVEE--KEKAKPVTYSYAFFH 97
S++R +++ TL S S+ GG + ++ D+V + VTYSY+FFH
Sbjct: 331 SSIRTSNNSQVNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFH 390
Query: 98 IIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFP 157
+ LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++
Sbjct: 391 FMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLT 448
Query: 158 DREF 161
+R+F
Sbjct: 449 NRDF 452
>sp|Q8K0E7|SERC2_MOUSE Serine incorporator 2 OS=Mus musculus GN=Serinc2 PE=2 SV=1
Length = 450
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 24/178 (13%)
Query: 1 MYLCYSGLSSEPRDYECNGLHRHSKAVSTGSLTL--------------GLITTVLSVVYS 46
M++ +S LS+ P D +CN H +K TG + L GL+ +L +
Sbjct: 279 MFVTWSALSNVP-DQKCNP-HLPTKN-GTGQVDLEDYSTVWWDAPSIVGLVIFILCTFFI 335
Query: 47 AVRAGSS---TTLLSPPSSPRAGGGKPLLPMDKADEVEEKEKAKPVTYSYAFFHIIFSLA 103
++R+ +L+ P + + + + ++ VTYSY+FFH LA
Sbjct: 336 SLRSSDHRQVNSLMQTEECPAEMVQQQQVAVSDGRAYDNEQDG--VTYSYSFFHFCLVLA 393
Query: 104 SMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 161
S++ M LT W S GE+ K++ W SVWV+I WA LY+W+LVAP+L P+R+F
Sbjct: 394 SLHVMMTLTNW-YSPGETRKMIST-WTSVWVKICASWAGLFLYLWTLVAPLLLPNRDF 449
>sp|Q9QZI8|SERC1_MOUSE Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1
Length = 453
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 26/184 (14%)
Query: 1 MYLCYSGLSSEPRDYECN-------GLHRHSKAVSTGSLT--------LGLITTVLSVVY 45
MYL +S +++EP + CN G + G +GL+ +L V Y
Sbjct: 272 MYLTWSAMTNEP-ETNCNPSLLSIIGFNTTRPIPKDGQSVQWWHPQGIIGLVLFLLCVFY 330
Query: 46 SAVRAGSST-----TLLSPPSS-PRAGGGKPLLPMDKADEVEE--KEKAKPVTYSYAFFH 97
S++R +++ TL S S+ G G+ +D D + + VTYSY+FFH
Sbjct: 331 SSIRTSNNSQVNKLTLTSDESTLIEDGNGRSDGSLDDGDGIHRAVDNERDGVTYSYSFFH 390
Query: 98 IIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFP 157
+ LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++
Sbjct: 391 FMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGLVLYVWTLVAPLVLT 448
Query: 158 DREF 161
+R+F
Sbjct: 449 NRDF 452
>sp|Q7TNK0|SERC1_RAT Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1
Length = 453
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 26/184 (14%)
Query: 1 MYLCYSGLSSEPRDYECN-------GLHRHSKAVSTGSLT--------LGLITTVLSVVY 45
MYL +S +++EP + CN G + G +GL+ +L V Y
Sbjct: 272 MYLTWSAMTNEP-ETNCNPSLLSIIGFNTTRPVPKDGQSVQWWHPQGIIGLVLFLLCVFY 330
Query: 46 SAVRAGSST-----TLLSPPSS-PRAGGGKPLLPMDKADEVEE--KEKAKPVTYSYAFFH 97
S++R +++ TL S S+ G G+ +D + V + VTYSY+FFH
Sbjct: 331 SSIRTSNNSQVNKLTLTSDESTLIEDGNGRSDGSLDDGEGVHRAVDNERDGVTYSYSFFH 390
Query: 98 IIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFP 157
+ LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++
Sbjct: 391 FMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLT 448
Query: 158 DREF 161
+R+F
Sbjct: 449 NRDF 452
>sp|Q58CW5|SERC2_BOVIN Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=2 SV=1
Length = 452
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 15/135 (11%)
Query: 34 LGLITTVLSVVYSAVRAGSS---TTLLSPPSSPRAGGGKPLLPMDKADEVEE----KEKA 86
+GL+ +L V+ ++R+ +L+ P P+L + V E +
Sbjct: 325 VGLVVFILCTVFISLRSSDHRQVNSLMQTEECP------PVLDATQQQVVSEGRAFDNEQ 378
Query: 87 KPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALY 146
VTYSY+FFH+ LAS++ M LT W GE+ K++ W +VWV+I W LY
Sbjct: 379 DGVTYSYSFFHLCLVLASVHIMMTLTNWYRP-GETRKMIST-WTAVWVKICASWTGLLLY 436
Query: 147 MWSLVAPILFPDREF 161
+W+LVAP+L P+R+F
Sbjct: 437 LWTLVAPLLLPNRDF 451
>sp|A4FUZ5|SERC3_BOVIN Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1
Length = 472
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 42/198 (21%)
Query: 1 MYLCYSGLSSEPRDYECN-GL-----HRHSKAVSTGSLT--------------------- 33
MYL +S +S+EP D CN GL H S ++ + T
Sbjct: 279 MYLTWSAMSNEP-DRSCNPGLLSIITHMTSSTLAPANTTAPAPTPAVPLQSGPSLNKENF 337
Query: 34 LGLITTVLSVVYSAVRAGSSTTLLSPPSSPRAGGGKPLLPMDKADEVEEKEKAKP----- 88
+GL+ VLS+ YS++R S++ + +G +L A+ ++E +P
Sbjct: 338 IGLLVFVLSLSYSSIRNSSNSQV---SKLTLSGSDSVILRDTAANGASDEEDGRPRRAVD 394
Query: 89 -----VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATA 143
V Y+Y+ FH++ AS+Y M LT W + + WP+VWV+I + W
Sbjct: 395 NEREGVQYNYSMFHLMLCSASLYIMMTLTNWYSPDANFQSMTS-KWPAVWVKISSSWVCL 453
Query: 144 ALYMWSLVAPILFPDREF 161
LY+W+LVAP++ +R+F
Sbjct: 454 LLYVWTLVAPLVLTNRDF 471
>sp|Q13530|SERC3_HUMAN Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=2 SV=2
Length = 473
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 46/200 (23%)
Query: 1 MYLCYSGLSSEPRDYECN-----GLHR---------HSKAV--------STGSLT----- 33
MYL +S +S+EP D CN + R +S AV +GSL
Sbjct: 280 MYLTWSAMSNEP-DRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNF 338
Query: 34 LGLITTVLSVVYSAVR------------AGSSTTLLSPPSSPRAGGGKPLLPMDKADEVE 81
+GL VL ++YS++R +GS + +L ++ A + P D
Sbjct: 339 IGLFVFVLCLLYSSIRTSTNSQVDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDN-- 396
Query: 82 EKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWA 141
EKE V YSY+ FH++ LAS+Y M LT W + + + WP+VWV+I + W
Sbjct: 397 EKEG---VQYSYSLFHLMLCLASLYIMMTLTSWYSPDAKFQSMTS-KWPAVWVKISSSWV 452
Query: 142 TAALYMWSLVAPILFPDREF 161
LY+W+LVAP++ R+F
Sbjct: 453 CLLLYVWTLVAPLVLTSRDF 472
>sp|Q5R533|SERC3_PONAB Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1
Length = 473
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 46/200 (23%)
Query: 1 MYLCYSGLSSEPRDYECN-----GLHR---------HSKAV--------STGSLT----- 33
MYL +S +S+EP D CN + R +S AV +GSL
Sbjct: 280 MYLTWSAMSNEP-DRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNF 338
Query: 34 LGLITTVLSVVYSAVR------------AGSSTTLLSPPSSPRAGGGKPLLPMDKADEVE 81
+GL VL ++YS++R +GS + +L ++ A + P D
Sbjct: 339 IGLFVFVLCLLYSSIRTSTNSQVDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDN-- 396
Query: 82 EKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWA 141
EKE V YSY+ FH++ LAS+Y M LT W + + + WP+VWV+I + W
Sbjct: 397 EKEG---VQYSYSLFHLMLCLASLYIMMTLTSWYSPDAKFQSMTS-KWPAVWVKISSSWV 452
Query: 142 TAALYMWSLVAPILFPDREF 161
LY+W+LVAP++ R+F
Sbjct: 453 CLLLYVWTLVAPLVLTSRDF 472
>sp|Q96SA4|SERC2_HUMAN Serine incorporator 2 OS=Homo sapiens GN=SERINC2 PE=2 SV=3
Length = 455
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 34 LGLITTVLSVVYSAVRAGSS---TTLLSPPSSPRAGGGKPLLPMDKADEVEEKEKAKP-V 89
+GLI +L ++ ++R+ +L+ P A E + + V
Sbjct: 325 VGLIIFLLCTLFISLRSSDHRQVNSLMQTEECPPMLDATQQQQQVAACEGRAFDNEQDGV 384
Query: 90 TYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWS 149
TYSY+FFH LAS++ M LT W GE+ K++ W +VWV+I WA LY+W+
Sbjct: 385 TYSYSFFHFCLVLASLHVMMTLTNWYKP-GETRKMIST-WTAVWVKICASWAGLLLYLWT 442
Query: 150 LVAPILFPDREF 161
LVAP+L +R+F
Sbjct: 443 LVAPLLLRNRDF 454
>sp|Q8BHJ6|SERC5_MOUSE Serine incorporator 5 OS=Mus musculus GN=Serinc5 PE=2 SV=1
Length = 461
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 34/190 (17%)
Query: 2 YLCYSGLSSEPRDYECNGLHRHSKAVSTGSLTLG--------LIT---TVLSVVYSAVRA 50
YL +S L+S+P L H K V+ + G ++T T+L +V +
Sbjct: 274 YLTFSALTSKPEK---KVLDEHGKNVTICAPDFGQDLHRDENMVTWLGTLLLIVCISYSC 330
Query: 51 GSSTTLLSPPSSPRAGGGKPLLPMDKA--------DEVEEKEKAKP-----------VTY 91
+STT S + ++ G P L + + ++ EE++ K Y
Sbjct: 331 LTSTTR-SSSDALQSRYGAPELEVARCCFCFGPDGEDTEEQQNVKKGPRVIYDEKKGTVY 389
Query: 92 SYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLV 151
SY++FH +F LAS+Y M LT W + K GW WV++ + W LY+ +LV
Sbjct: 390 SYSYFHFVFFLASLYVMMTLTSWFHYENATIKTFFSGWSVFWVKMASCWMCVLLYLQTLV 449
Query: 152 APILFPDREF 161
AP+ P R+F
Sbjct: 450 APLCCPSRQF 459
>sp|Q12116|TMS1_YEAST Membrane protein TMS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TMS1 PE=1 SV=1
Length = 473
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 52/204 (25%)
Query: 2 YLCYSGLSSEPRDYECNGLHRHSKAVSTGSLTLGLITTVLSVVYSAVRAGSSTTL----- 56
YL S +SSEP D CN L R S S+ LG + T +++ Y+ RA +++
Sbjct: 269 YLTMSAMSSEPDDKMCNPLVR-SSGTRKFSIILGSLFTFIAIAYTTTRAAANSAFQGTNT 327
Query: 57 -------------------------------LSPPSSPRA--------GGGKPLLPMDKA 77
+ S P + G P MD
Sbjct: 328 NGAIYLGNDIEYEGLGGQTRNQLRYEAIKQAVEEGSLPESALYDTAWLGTSSPTGAMDNQ 387
Query: 78 DEVEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVG--WPSVWVR 135
++ +E+ K Y+Y FH+IF LA+ + A+LLT + + + G + VG + WV+
Sbjct: 388 ND-DERTGTK---YNYTLFHVIFFLATQWIAILLTI-NVTQDDVGDFIPVGRTYFYSWVK 442
Query: 136 ILTGWATAALYMWSLVAPILFPDR 159
I++ W ALY W++VAP + PDR
Sbjct: 443 IVSAWICYALYGWTVVAPAIMPDR 466
>sp|Q63175|SERC5_RAT Serine incorporator 5 OS=Rattus norvegicus GN=Serinc5 PE=2 SV=1
Length = 460
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 24/148 (16%)
Query: 34 LGLITTVLSVVYSAVRAGSSTTLLSPPSSPRAGGGKPLLPMDKA--------DEVEEKEK 85
LG + V+ + YS + +STT S + R G P L + + ++ EE++
Sbjct: 315 LGTLLLVVCISYSCL---TSTTRSSSDALQRRYGA-PELEVARCCFCFGPDGEDTEEQQN 370
Query: 86 AKP-----------VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVG-WPSVW 133
K YSY++FH + LAS+Y M LT W + + VG W W
Sbjct: 371 VKEGPRVIYDEKKGTVYSYSYFHFVLLLASLYVMMTLTSWFHYENATIETFFVGSWSIFW 430
Query: 134 VRILTGWATAALYMWSLVAPILFPDREF 161
V++ + W LY+W+LVAP+ P R+F
Sbjct: 431 VKMASCWMCVLLYLWTLVAPLCCPSRQF 458
>sp|Q803X0|SERC5_DANRE Serine incorporator 5 OS=Danio rerio GN=serinc5 PE=2 SV=1
Length = 460
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 78 DEVEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGW-STSVGESGKLVDVGWPSVWVRI 136
V+ E+ V YSY FFH +F L S+Y M +T W + +L++ W W+++
Sbjct: 376 QNVKYDERDGTV-YSYCFFHFVFFLGSLYVMMTVTNWFHYDNAKIERLLEGSWSVFWIKM 434
Query: 137 LTGWATAALYMWSLVAPILFPDR 159
+ W YMW+LV P+LFP R
Sbjct: 435 ASSWVCLFFYMWTLVVPMLFPQR 457
>sp|A9UY97|SERIC_MONBE Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3
SV=1
Length = 483
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 22/159 (13%)
Query: 16 ECNGLHRHSKAVSTGSLTLGLITTVLSVVYSAVRAGSSTTLLSPPSSPRAGGGKPLLPMD 75
EC G +T ++ +G + T +SV YS++R S + L + G + + MD
Sbjct: 333 ECGG----DAGTNTAAIVIGALLTFISVAYSSIRTSSKSQL--GKLGLQQGSNENIYLMD 386
Query: 76 KA-------------DEVEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESG 122
V + E+ V YS++FFH+ F++A++Y M+LT W +S ++
Sbjct: 387 DKAADFDEDDEDRRLQRVVDNEQ-DAVRYSWSFFHLTFAVAALYLMMVLTEWDSS--DAD 443
Query: 123 KLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 161
+ GW SVWV++++ W LY W+++AP+ PDR+F
Sbjct: 444 VRIGKGWASVWVQVVSSWVIFLLYGWTMMAPVCLPDRDF 482
>sp|Q54UF8|SERIC_DICDI Probable serine incorporator OS=Dictyostelium discoideum GN=serinc
PE=3 SV=1
Length = 417
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 2 YLCYSGLSSEPRDYECNGLHRHSKAVSTGSLTLGLITTVLSVVYSAVRAGSSTTLLSPPS 61
YL YS ++SEP C+ + S ST + +G + T++SV YSA R+ ST LL +
Sbjct: 253 YLIYSAINSEPPG-TCSSNNTSSPKEST--IIIGAVFTIISVCYSAFRSSDSTELLGNHN 309
Query: 62 SPRAGGGKPLLPMDKADEVE--EKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVG 119
+ +P D E ++ + Y+Y+FFH F+ +MY + LLT W+T
Sbjct: 310 HYSS------IPTDPNAETTGVADDECECTAYNYSFFHFTFACGAMYLSALLTNWATMTS 363
Query: 120 ESGKL-----------VDVGWPSVWVRILTGWATAALYMWSLVAPILFPDR 159
VD G SVWV++++ W LY+W+L+ PIL +R
Sbjct: 364 TDITSSSTSSSNSTISVDSGMVSVWVKVVSSWVVVLLYLWTLIGPILLRNR 414
>sp|Q4R6L9|SERC5_MACFA Serine incorporator 5 OS=Macaca fascicularis GN=SERINC5 PE=2 SV=1
Length = 424
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 37/192 (19%)
Query: 2 YLCYSGLSSEPRDYECNGLHRHSKAVSTGSLTLG-----------------LITTVLSVV 44
YL +S LSS+P + L H K V+ G LI +L
Sbjct: 236 YLTFSALSSKPAEVV---LDEHGKNVTICVPDFGQDLYRDENLVTILGTSLLIGCILYSC 292
Query: 45 YSAVRAGSSTTLLSPPSSPRAGGGKPLLPMD-KADEVEEKEKAKP-----------VTYS 92
++ SS L ++P + ++ EE+++ K Y
Sbjct: 293 LTSTTRSSSDALQGRYAAPELEIARCCFCFSPGGEDTEEQQQGKEGPRVIYDEKKGTVYI 352
Query: 93 YAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDV---GWPSVWVRILTGWATAALYMWS 149
Y++FH +F LAS+Y M +T W ES + W WV++ + W LY+ +
Sbjct: 353 YSYFHFVFFLASLYVMMTVTNWFNY--ESANIESFFSGSWSIFWVKMASCWICVLLYLCT 410
Query: 150 LVAPILFPDREF 161
LVAP+ P REF
Sbjct: 411 LVAPLCCPTREF 422
>sp|Q9QZI9|SERC3_MOUSE Serine incorporator 3 OS=Mus musculus GN=Serinc3 PE=1 SV=2
Length = 472
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 35 GLITTVLSVVYSAVRAGSSTTLLSPPSSPRAGGGKPLLPMDKADEVEEKEKAKP------ 88
GLI V ++YS+ R S++ + + G ++ D + ++E +P
Sbjct: 340 GLIIFVFCLIYSSFRTSSNSQV----NKLTLSGSDSVILGDTTNGANDEEDGQPRRAVDN 395
Query: 89 ----VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAA 144
V YSY+FFH++ AS+Y M +T W + + K V W +VW ++ + W
Sbjct: 396 EKEGVQYSYSFFHLMLCCASLYIMMTITSWYSPDAKFQK-VSSKWLAVWFKMGSSWLCLL 454
Query: 145 LYMWSLVAPILFPDREF 161
LY+W+LVAP++ R+F
Sbjct: 455 LYLWTLVAPLVLTGRDF 471
>sp|A8WCG0|SERC4_RAT Serine incorporator 4 OS=Rattus norvegicus GN=Serinc4 PE=2 SV=2
Length = 492
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 63 PRAGGGKPLLPMDKADEVEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGW-STSVGES 121
P G G P D+ + +++ ++YSY+ FH F LAS+Y + LT W S E
Sbjct: 389 PEDGQGSRARPADQETPPAAQVQSQHLSYSYSGFHFAFFLASLYVMVTLTNWFSYEEAEL 448
Query: 122 GKLVDVG-WPSVWVRILTGWAT 142
K G W + WV++ + WA
Sbjct: 449 EKTFTKGSWATFWVKVASCWAC 470
>sp|A6NH21|SERC4_HUMAN Serine incorporator 4 OS=Homo sapiens GN=SERINC4 PE=2 SV=1
Length = 518
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 64 RAGGGKPLLPMDKADEVEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGE--S 121
R G +P D+ + + ++Y+Y+ FH +F LAS+Y + LT W + G
Sbjct: 399 RGGAARP---ADQETPPAPPVQVQHLSYNYSAFHFVFFLASLYVMVTLTNWFSYEGAELE 455
Query: 122 GKLVDVGWPSVWVRILTGWAT 142
+ W + WV++ + WA
Sbjct: 456 KTFIKGSWATFWVKVASCWAC 476
>sp|Q5XK03|SERC4_MOUSE Serine incorporator 4 OS=Mus musculus GN=Serinc4 PE=2 SV=1
Length = 492
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 75 DKADEVEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGW-STSVGESGKLVDVG-WPSV 132
D+ + +++ ++YSY+ FH F LAS+Y + LT W S E K G W +
Sbjct: 401 DQETPPAAQVQSQHLSYSYSGFHFAFFLASLYVMVTLTNWFSYEEAELEKTFTKGSWATF 460
Query: 133 WVRILTGWAT 142
WV++ + WA
Sbjct: 461 WVKVASCWAC 470
>sp|Q86VE9|SERC5_HUMAN Serine incorporator 5 OS=Homo sapiens GN=SERINC5 PE=2 SV=1
Length = 423
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 56/153 (36%), Gaps = 32/153 (20%)
Query: 2 YLCYSGLSSEPRDYECNGLHRHSKAVSTGSLTLG-----------------LITTVLSVV 44
YL +S LSS+P + L H K V+ G LI +L
Sbjct: 273 YLTFSALSSKPAEVV---LDEHGKNVTICVPDFGQDLYRDENLVTILGTSLLIGCILYSC 329
Query: 45 YSAVRAGSSTTLLSPPSSPRAGGGKPLLPMDKADEVEEKEK------------AKPVTYS 92
++ SS L ++P + E E+++ K Y
Sbjct: 330 LTSTTRSSSDALQGRYAAPELEIARCCFCFSPGGEDTEEQQPGKEGPRVIYDEKKGTVYI 389
Query: 93 YAFFHIIFSLASMYSAMLLTGWSTSVGESGKLV 125
Y++FH +F LAS+Y M +T W V + L+
Sbjct: 390 YSYFHFVFFLASLYVMMTVTNWFNHVRSAFHLL 422
>sp|Q8ZND6|PTA_SALTY Phosphate acetyltransferase OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=pta PE=1 SV=1
Length = 714
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 27 VSTGSLTLGLITTVLSVVYSAVRAGSSTTLLSPPSSPRAGGGKP 70
+ TG+ ++GL + L V+ + R G ++ P + PRAGG P
Sbjct: 8 IPTGT-SVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRAGGDAP 50
>sp|Q5BAZ5|INO80_EMENI Putative DNA helicase ino80 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ino80
PE=3 SV=1
Length = 1612
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 38 TTVLSVVYSAVRAGSSTTLLSPPSS--PRAGGGKPLLPMDKADEVEEKEKA 86
T L ++SAV A ++T+L PP+S P+ G +P+ P+ A +E+K A
Sbjct: 204 TPGLGTIHSAVPAANATSLNPPPASFHPKVGDIEPVPPV-SAPRLEKKPSA 253
>sp|Q7CQ49|NUOA_SALTY NADH-quinone oxidoreductase subunit A OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|Q8XFY2|NUOA_SALTI NADH-quinone oxidoreductase subunit A OS=Salmonella typhi GN=nuoA
PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|B4TPL0|NUOA_SALSV NADH-quinone oxidoreductase subunit A OS=Salmonella schwarzengrund
(strain CVM19633) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|B5BCL8|NUOA_SALPK NADH-quinone oxidoreductase subunit A OS=Salmonella paratyphi A
(strain AKU_12601) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|A9N4C4|NUOA_SALPB NADH-quinone oxidoreductase subunit A OS=Salmonella paratyphi B
(strain ATCC BAA-1250 / SPB7) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|Q5PN55|NUOA_SALPA NADH-quinone oxidoreductase subunit A OS=Salmonella paratyphi A
(strain ATCC 9150 / SARB42) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|B4SYZ9|NUOA_SALNS NADH-quinone oxidoreductase subunit A OS=Salmonella newport (strain
SL254) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|B4TBJ4|NUOA_SALHS NADH-quinone oxidoreductase subunit A OS=Salmonella heidelberg
(strain SL476) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|B5RCF3|NUOA_SALG2 NADH-quinone oxidoreductase subunit A OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|B5R309|NUOA_SALEP NADH-quinone oxidoreductase subunit A OS=Salmonella enteritidis PT4
(strain P125109) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|B5FPG9|NUOA_SALDC NADH-quinone oxidoreductase subunit A OS=Salmonella dublin (strain
CT_02021853) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|Q57M28|NUOA_SALCH NADH-quinone oxidoreductase subunit A OS=Salmonella choleraesuis
(strain SC-B67) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|A9MJ97|NUOA_SALAR NADH-quinone oxidoreductase subunit A OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=nuoA PE=3
SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|B5EZK9|NUOA_SALA4 NADH-quinone oxidoreductase subunit A OS=Salmonella agona (strain
SL483) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLAR 119
>sp|Q9P6J7|YHD3_SCHPO Uncharacterized MFS-type transporter C1683.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1683.03c PE=3 SV=1
Length = 519
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 21/92 (22%)
Query: 72 LPMDKADEVEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGW-- 129
+P +ADEVEEK+K Y AFF + S ++L +S + G VGW
Sbjct: 226 IPHIEADEVEEKQK---FDYLGAFFGV--------SGLVLINFSWNQGPV-----VGWQV 269
Query: 130 PSVWVRILTGWATAALYMW---SLVAPILFPD 158
P V++ ++ G+ + +++ +V PIL P
Sbjct: 270 PYVYILLIIGFLSLVVFVLVEKRVVQPILAPS 301
>sp|Q3YZS2|NUOA_SHISS NADH-quinone oxidoreductase subunit A OS=Shigella sonnei (strain
Ss046) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLVR 119
>sp|P0AFC6|NUOA_SHIFL NADH-quinone oxidoreductase subunit A OS=Shigella flexneri GN=nuoA
PE=3 SV=1
Length = 147
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLVR 119
>sp|Q0T2J9|NUOA_SHIF8 NADH-quinone oxidoreductase subunit A OS=Shigella flexneri serotype
5b (strain 8401) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLVR 119
>sp|Q32DQ1|NUOA_SHIDS NADH-quinone oxidoreductase subunit A OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLVR 119
>sp|Q31YH3|NUOA_SHIBS NADH-quinone oxidoreductase subunit A OS=Shigella boydii serotype 4
(strain Sb227) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLVR 119
>sp|B2TW69|NUOA_SHIB3 NADH-quinone oxidoreductase subunit A OS=Shigella boydii serotype
18 (strain CDC 3083-94 / BS512) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLVR 119
>sp|Q1R9C9|NUOA_ECOUT NADH-quinone oxidoreductase subunit A OS=Escherichia coli (strain
UTI89 / UPEC) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLVR 119
>sp|B1LLP1|NUOA_ECOSM NADH-quinone oxidoreductase subunit A OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=nuoA PE=3 SV=1
Length = 147
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 18/69 (26%)
Query: 91 YSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSL 150
Y A F +IF + ++Y L WSTS+ ESG WV G+ AA++++ L
Sbjct: 69 YLVAMFFVIFDVEALY----LFAWSTSIRESG----------WV----GFVEAAIFIFVL 110
Query: 151 VAPILFPDR 159
+A +++ R
Sbjct: 111 LAGLVYLVR 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,519,683
Number of Sequences: 539616
Number of extensions: 2301496
Number of successful extensions: 7286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 7215
Number of HSP's gapped (non-prelim): 89
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)