BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031333
MRVICWVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVI
DGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVL
ILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSPEC

High Scoring Gene Products

Symbol, full name Information P value
YGR017W
Putative protein of unknown function
gene from Saccharomyces cerevisiae 0.00069

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031333
        (161 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2039949 - symbol:AT2G46580 species:3702 "Arabi...   504  2.9e-48   1
SGD|S000003249 - symbol:YGR017W "Putative protein of unkn...    87  0.00069   2


>TAIR|locus:2039949 [details] [associations]
            symbol:AT2G46580 species:3702 "Arabidopsis thaliana"
            [GO:0004733 "pyridoxamine-phosphate oxidase activity" evidence=IEA]
            [GO:0008615 "pyridoxine biosynthetic process" evidence=IEA]
            [GO:0010181 "FMN binding" evidence=IEA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] InterPro:IPR000659 InterPro:IPR012349
            InterPro:IPR024624 Pfam:PF12766 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006418 GO:GO:0010181 GO:GO:0009443
            Gene3D:2.30.110.10 SUPFAM:SSF50475 GO:GO:0008615
            UniPathway:UPA00190 GO:GO:0004733 PANTHER:PTHR10851 EMBL:AY086412
            EMBL:BT024917 IPI:IPI00540909 PIR:F84904 RefSeq:NP_566081.1
            UniGene:At.21431 ProteinModelPortal:Q9ZPY1 SMR:Q9ZPY1 PRIDE:Q9ZPY1
            EnsemblPlants:AT2G46580.1 GeneID:819270 KEGG:ath:AT2G46580
            TAIR:At2g46580 eggNOG:COG5135 HOGENOM:HOG000233130
            InParanoid:Q9ZPY1 OMA:ALHRNRS PhylomeDB:Q9ZPY1
            ProtClustDB:CLSN2688969 Genevestigator:Q9ZPY1 InterPro:IPR024015
            TIGRFAMs:TIGR04026 Uniprot:Q9ZPY1
        Length = 198

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 90/154 (58%), Positives = 121/154 (78%)

Query:     7 VFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNSD 66
             VFRGF++N+D+IQIN+D RSRKIEELK CPFSE+CWYF+++W+QFRINGR++VID SN D
Sbjct:    45 VFRGFEENSDRIQINTDLRSRKIEELKHCPFSEMCWYFSDTWEQFRINGRIEVIDASNPD 104

Query:    67 PEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQP-KEFSLDPCAGPVDAFCVLILDPD 125
               KLQ REK+WF  S+++RL Y+ P  G P  +EQ  ++  LDP +GPV  +C+L+L+P+
Sbjct:   105 QTKLQQREKAWFANSLRSRLIYVCPTPGSPCNSEQSSQQVKLDPSSGPVPEYCLLLLEPE 164

Query:   126 QVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSP 159
             +VDYLNLK+NQ+L F S  +  GEK W S K +P
Sbjct:   165 KVDYLNLKTNQRLFFSSMATGTGEKCWTSEKVNP 198


>SGD|S000003249 [details] [associations]
            symbol:YGR017W "Putative protein of unknown function"
            species:4932 "Saccharomyces cerevisiae" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0016491
            "oxidoreductase activity" evidence=IEA] [GO:0010181 "FMN binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR012349 InterPro:IPR024624 Pfam:PF12766 SGD:S000003249
            GO:GO:0005634 GO:GO:0005737 EMBL:BK006941 GO:GO:0016491
            GO:GO:0010181 Gene3D:2.30.110.10 SUPFAM:SSF50475 eggNOG:COG5135
            EMBL:Z72802 PIR:S64308 RefSeq:NP_011531.1 ProteinModelPortal:P53210
            DIP:DIP-1860N IntAct:P53210 MINT:MINT-409003 STRING:P53210
            PaxDb:P53210 EnsemblFungi:YGR017W GeneID:852900 KEGG:sce:YGR017W
            CYGD:YGR017w HOGENOM:HOG000248042 OMA:WEEQEVC OrthoDB:EOG4DJP5S
            NextBio:972580 Genevestigator:P53210 GermOnline:YGR017W
            Uniprot:P53210
        Length = 297

 Score = 87 (35.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
 Identities = 23/61 (37%), Positives = 32/61 (52%)

Query:    11 FQDN-TDKIQINSDTRSRKIEEL------------KSC--PFSEICWYFTESWDQFRING 55
             F D  T+ +  N+D RS KI E             K C  PF E C+YF E+W+Q+R +G
Sbjct:    50 FHDKRTNVLTFNTDMRSSKITESFITPNSNNSSDSKRCETPFFEACFYFPETWEQYRFSG 109

Query:    56 R 56
             +
Sbjct:   110 Q 110

 Score = 53 (23.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
 Identities = 23/95 (24%), Positives = 40/95 (42%)

Query:    75 KSWFGCSMKARLQYLDPEQGCPSVNEQPKEFS-----LDPC---AGPVDAFCVLILDPDQ 126
             + W   S   +  Y  P  G    +E  K+       +D     AG ++ F ++ L  D 
Sbjct:   204 RQWSSLSRHTKSLYRKPAPGQKLTSETSKQLDKLHRGVDGAKEDAG-LENFGIVCLCVDS 262

Query:   127 VDYLNLKSNQK-LKFMSRLSDN-GEKYWASLKTSP 159
             VD+LNLK  +   +++ + +D   E  W   +  P
Sbjct:   263 VDFLNLKEGRGGERWIFQKTDGKDEDLWEEQEVCP 297


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      161       161   0.00074  107 3  11 22  0.38    32
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  176 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.62u 0.11s 15.73t   Elapsed:  00:00:00
  Total cpu time:  15.62u 0.11s 15.73t   Elapsed:  00:00:00
  Start:  Fri May 10 22:09:58 2013   End:  Fri May 10 22:09:58 2013

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